RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC25A12 (Homo sapiens)

Ensembl gene IDs: ENSG00000115840

Ensembl transcript IDs: ENST00000263812.8, ENST00000422440.7, ENST00000426896.5, ENST00000464063.1, ENST00000472070.1, ENST00000472748.5, ENST00000475360.6, ENST00000484227.5, ENST00000485880.1, ENST00000494892.1

Found 359 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCGATGCCTGCAAACGTGGCTGTGGCGAGTCTGTATCCACCGATGTaGTCAGGGTTGGCAGGAGGAAGGTCTGCAATGCGTGACTTAGGT +
Preference number: 1 (lower is better)
Translates to: SMPANVAVASLYPPM*SGLAGGRSAMRDLG
Trigger: ACCTAAGTCACGCATTGCAGACCTTCCTCCTGCCAACCCTGATCACATCGGTGGATACAGACTCGCCACAGCCACGTTTGCAGGCATCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR GCA 90 bp AAGCTAATTCTTTTGTTCCTGGAGGGCCTCCAGGGAGCCTACAGTTaGAGTCACAGGGCTGTCAGCCATCAATCGAGGAGCACTGTGCAG +
Preference number: 1 (lower is better)
Translates to: KLILLFLEGLQGAYS*SHRAVSHQSRSTVQ
Trigger: CTGCACAGTGCTCCTCGATTGATGGCTGACAGCCCTGTGACTGCAACTGTAGGCTCCCTGGAGGCCCTCCAGGAACAAAAGAATTAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR GCA 90 bp GGCGCCATTTTGCCACACTCAACAGTTGTCTCATCACTGAGTGGCTaGCACTGCTGCCTTTGGCTGAACCACAGCAACACTAGGAGACTT +
Preference number: 1 (lower is better)
Translates to: GAILPHSTVVSSLSG*HCCLWLNHSNTRRL
Trigger: AAGTCTCCTAGTGTTGCTGTGGTTCAGCCAAAGGCAGCAGTGGCAGCCACTCAGTGATGAGACAACTGTTGAGTGTGGCAAAATGGCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR GCA 90 bp ACAGTTGCAGTCACAGGGCTGTCAGCCATCAATCGAGGAGCACTGTaGAGGATACTAAGTAACTTGGTCTGTCTCCAGGCTCGCCTCTTG +
Preference number: 1 (lower is better)
Translates to: TVAVTGLSAINRGAL*RILSNLVCLQARLL
Trigger: CAAGAGGCGAGCCTGGAGACAGACCAAGTTACTTAGTATCCTGCACAGTGCTCCTCGATTGATGGCTGACAGCCCTGTGACTGCAACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR GCA 90 bp TTGCCACACTCAACAGTTGTCTCATCACTGAGTGGCTGCCACTGCTaGCTTTGGCTGAACCACAGCAACACTAGGAGACTTAAATTTCGG +
Preference number: 1 (lower is better)
Translates to: LPHSTVVSSLSGCHC*LWLNHSNTRRLKFR
Trigger: CCGAAATTTAAGTCTCCTAGTGTTGCTGTGGTTCAGCCAAAGGCAGCAGTGGCAGCCACTCAGTGATGAGACAACTGTTGAGTGTGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR CCA 90 bp CACTCAACAGTTGTCTCATCACTGAGTGGCTGCCACTGCTGCCTTTaGCTGAACCACAGCAACACTAGGAGACTTAAATTTCGGGAGATA +
Preference number: 1 (lower is better)
Translates to: HSTVVSSLSGCHCCL*LNHSNTRRLKFREI
Trigger: TATCTCCCGAAATTTAAGTCTCCTAGTGTTGCTGTGGTTCAGCCAAAGGCAGCAGTGGCAGCCACTCAGTGATGAGACAACTGTTGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR GCA 90 bp CAGCACACACAAGTCATTAGCCTGGTCCTCTGGCATCCACTGGCATaGATCTTTCCAAAGTATCACTTATTCAGTGGTAGCAGCACTATG +
Preference number: 1 (lower is better)
Translates to: QHTQVISLVLWHPLA*IFPKYHLFSGSSTM
Trigger: CATAGTGCTGCTACCACTGAATAAGTGATACTTTGGAAAGATGCATGCCAGTGGATGCCAGAGGACCAGGCTAATGACTTGTGTGTGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR CCA 90 bp CACATCAGCACACACAAGTCATTAGCCTGGTCCTCTGGCATCCACTaGCATGCATCTTTCCAAAGTATCACTTATTCAGTGGTAGCAGCA +
Preference number: 1 (lower is better)
Translates to: HISTHKSLAWSSGIH*HASFQSITYSVVAA
Trigger: TGCTGCTACCACTGAATAAGTGATACTTTGGAAAGATGCATGCCAGTGGATGCCAGAGGACCAGGCTAATGACTTGTGTGTGCTGATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR GCA 90 bp ATTTTGCCACACTCAACAGTTGTCTCATCACTGAGTGGCTGCCACTaGTGCCTTTGGCTGAACCACAGCAACACTAGGAGACTTAAATTT +
Preference number: 1 (lower is better)
Translates to: ILPHSTVVSSLSGCH*CLWLNHSNTRRLKF
Trigger: AAATTTAAGTCTCCTAGTGTTGCTGTGGTTCAGCCAAAGGCAGCAGTGGCAGCCACTCAGTGATGAGACAACTGTTGAGTGTGGCAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR CCA 90 bp ATTAAATACAAATGGAAACACATCAGCACACACAAGTCATTAGCCTaGTCCTCTGGCATCCACTGGCATGCATCTTTCCAAAGTATCACT +
Preference number: 1 (lower is better)
Translates to: IKYKWKHISTHKSLA*SSGIHWHASFQSIT
Trigger: AGTGATACTTTGGAAAGATGCATGCCAGTGGATGCCAGAGGACCAGGCTAATGACTTGTGTGTGCTGATGTGTTTCCATTTGTATTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR TCA 90 bp TATATAAGTCTGCAAGCTGATATAGAATATCAATTTCTAGTGGTGTaGCTTGTCCATAGCGTATGGCACTCTGGGCAAATTCCTCCTTTG +
Preference number: 1 (lower is better)
Translates to: YISLQADIEYQFLVV*LVHSVWHSGQIPPL
Trigger: CAAAGGAGGAATTTGCCCAGAGTGCCATACGCTATGGACAAGTCACACCACTAGAAATTGATATTCTATATCAGCTTGCAGACTTATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR TCA 90 bp TGTACATTTCAAGCCACTCAGAACCGCATTACATTTCTACAAATGTaGTTTGTTGGGATGAGGTGCCAAGATGTCTCTGTACAAAGATGT +
Preference number: 1 (lower is better)
Translates to: CTFQATQNRITFLQM*FVGMRCQDVSVQRC
Trigger: ACATCTTTGTACAGAGACATCTTGGCACCTCATCCCAACAAATCACATTTGTAGAAATGTAATGCGGTTCTGAGTGGCTTGAAATGTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
3UTR GCA 90 bp GATTTAAACCTCCCACGTGTCCATTTTCATCAGCCAGAAGTAGTTTaGAATGAGCATAAACAGGAAAATAGATTGCAGAGAAGGGAATGT +
Preference number: 1 (lower is better)
Translates to: DLNLPRVHFHQPEVV*NEHKQENRLQRREC
Trigger: ACATTCCCTTCTCTGCAATCTATTTTCCTGTTTATGCTCATTGCAAACTACTTCTGGCTGATGAAAATGGACACGTGGGAGGTTTAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR GCA 90 bp AGATGTCTCTGTACAAAGATGTACAATATGTACAATCACTGTAAGTaGAAGCTGTGCAAAGCAGAGTCTAGAACACTAATTCATGCCAAG +
Preference number: 1 (lower is better)
Translates to: RCLCTKMYNMYNHCK*KLCKAESRTLIHAK
Trigger: CTTGGCATGAATTAGTGTTCTAGACTCTGCTTTGCACAGCTTGCACTTACAGTGATTGTACATATTGTACATCTTTGTACAGAGACATCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
3UTR CAA 90 bp CATTACAGGGCTGCTCTCCTAGGCCTCTTTCTTCAAGGCGCCATTTaGCCACACTCAACAGTTGTCTCATCACTGAGTGGCTGCCACTGC +
Preference number: 2 (lower is better)
Translates to: HYRAALLGLFLQGAI*PHSTVVSSLSGCHC
Trigger: GCAGTGGCAGCCACTCAGTGATGAGACAACTGTTGAGTGTGGCAAAATGGCGCCTTGAAGAAAGAGGCCTAGGAGAGCAGCCCTGTAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR CAA 90 bp AAAGCTAATTCTTTTGTTCCTGGAGGGCCTCCAGGGAGCCTACAGTaGCAGTCACAGGGCTGTCAGCCATCAATCGAGGAGCACTGTGCA +
Preference number: 2 (lower is better)
Translates to: KANSFVPGGPPGSLQ*QSQGCQPSIEEHCA
Trigger: TGCACAGTGCTCCTCGATTGATGGCTGACAGCCCTGTGACTGCAACTGTAGGCTCCCTGGAGGCCCTCCAGGAACAAAAGAATTAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR-3UTR CCA 90 bp GGCCTCCAGGGAGCCTACAGTTGCAGTCACAGGGCTGTCAGCCATCAATCGAGGACTCTTTTGAAAGCTTaGCCTTTGCCTTACTGTGTC +
Preference number: 2 (lower is better)
Translates to: GLQGAYSCSHRAVSHQSRTLLKA*PLPYCV
Trigger: GACACAGTAAGGCAAAGGCCAAGCTTTCAAAAGAGT...CCTCGATTGATGGCTGACAGCCCTGTGACTGCAACTGTAGGCTCCCTGGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR-3UTR TCA 90 bp TTCAGGGCGCTGACTCTGGGTCCCGTGGTGATCTCTCCAGCTACTTGCAGACGACAAATTCCTCCTTTGTaGCTTCAACATCTTTCCTTG +
Preference number: 2 (lower is better)
Translates to: FRALTLGPVVISPATCRRQIPPL*LQHLSL
Trigger: CAAGGAAAGATGTTGAAGTCACAAAGGAGGAATTTG...TCGTCTGCAAGTAGCTGGAGAGATCACCACGGGACCCAGAGTCAGCGCCCTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR-3UTR GCA 90 bp TTTGTTTTCGATGCCTGCAAACGTGGCTGTGGCGAGTCTGTATCCACCGATGTGTGCTTCTTCCGGTTATaGCCAAAATGCAGTCGGATA +
Preference number: 2 (lower is better)
Translates to: FVFDACKRGCGESVSTDVCFFRL*PKCSRI
Trigger: TATCCGACTGCATTTTGGGCATAACCGGAAGAAGCA...CACATCGGTGGATACAGACTCGCCACAGCCACGTTTGCAGGCATCGAAAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR-3UTR GCA 90 bp AATCTTCCTGAAACAGTCGATGACACCACTGTATGTCGTCTGGCCAGCGCGGGCTTGTGCCAGCTAGAGTaGTATATATCTTACGAACAA +
Preference number: 2 (lower is better)
Translates to: NLPETVDDTTVCRLASAGLCQLE*YISYEQ
Trigger: TTGTTCGTAAGATATATAGCACTCTAGCTGGCACAA...GCCCGCGCTGGCCAGACGACATACAGTGGTGTCATCGACTGTTTCAGGAAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR-3UTR CCA 90 bp TGCAATGAGCATAAACAGGAAAATAGATTGCAGAGAAGGGAATGTCTCGGAGGAGAGCCAGAGCCACGCTaGTTTTGCATTCGGGTCTTC +
Preference number: 2 (lower is better)
Translates to: CNEHKQENRLQRRECLGGEPEPR*FCIRVF
Trigger: GAAGACCCGAATGCAAAACCAGCGTGGCTCTGGCTC...TCCTCCGAGACATTCCCTTCTCTGCAATCTATTTTCCTGTTTATGCTCATTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR-3UTR TCA 90 bp TGCAATGAGCATAAACAGGAAAATAGATTGCAGAGAAGGGAATGTCTCGGAGGAGAAGCTAACCTGGTGTaGGATACTTCCTCCAGCTGC +
Preference number: 2 (lower is better)
Translates to: CNEHKQENRLQRRECLGGEANLV*DTSSSC
Trigger: GCAGCTGGAGGAAGTATCTCACACCAGGTTAGCTTC...TCCTCCGAGACATTCCCTTCTCTGCAATCTATTTTCCTGTTTATGCTCATTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR-3UTR CCA 90 bp AACACGCTTTGGCACCCTTATACAGACCAAAAATTCCCAAGTCCCGGAGCACATAACTTCTGCTGGAAGTaGAACAGAGCCATCTCTTCT +
Preference number: 2 (lower is better)
Translates to: NTLWHPYTDQKFPSPGAHNFCWK*NRAISS
Trigger: AGAAGAGATGGCTCTGTTCCACTTCCAGCAGAAGTT...ATGTGCTCCGGGACTTGGGAATTTTTGGTCTGTATAAGGGTGCCAAAGCGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR CAA 90 bp CTGTCAGCCATCAATCGAGGAGCACTGTGCAGGATACTAAGTAACTaGGTCTGTCTCCAGGCTCGCCTCTTGAAAATATTTGCATACATT +
Preference number: 2 (lower is better)
Translates to: LSAINRGALCRILSN*VCLQARLLKIFAYI
Trigger: AATGTATGCAAATATTTTCAAGAGGCGAGCCTGGAGACAGACCAAGTTACTTAGTATCCTGCACAGTGCTCCTCGATTGATGGCTGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR-3UTR GCA 90 bp CTGGAGAAACTGCGTGAATTCTGTGTAGTTAAGATGCTTCTTCCGGTTATGCCCTGCTTCTTCCGGTTATaGCCAAAATGCAGTCGGATA +
Preference number: 2 (lower is better)
Translates to: LEKLREFCVVKMLLPVMPCFFRL*PKCSRI
Trigger: TATCCGACTGCATTTTGGGCATAACCGGAAGAAGCA...GGGCATAACCGGAAGAAGCATCTTAACTACACAGAATTCACGCAGTTTCTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
3UTR-3UTR GCA 90 bp GAAGATTTAAACCTCCCACGTGTCCATTTTCATCAGCCAGAAGTAGTTTGCAATGAGCCACGCTGGTTTTaGATTCGGGTCTTCACCAGA +
Preference number: 2 (lower is better)
Translates to: EDLNLPRVHFHQPEVVCNEPRWF*IRVFTR
Trigger: TCTGGTGAAGACCCGAATGCAAAACCAGCGTGGCTC...ATTGCAAACTACTTCTGGCTGATGAAAATGGACACGTGGGAGGTTTAAATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR-3UTR GCA 90 bp AACACGCTTTGGCACCCTTATACAGACCAAAAATTCCCAAGTCCCGGAGCACATATCTCTCCAGCTACTTaGAGACGAATCTTCACTATC +
Preference number: 2 (lower is better)
Translates to: NTLWHPYTDQKFPSPGAHISPAT*RRIFTI
Trigger: GATAGTGAAGATTCGTCTGCAAGTAGCTGGAGAGAT...ATGTGCTCCGGGACTTGGGAATTTTTGGTCTGTATAAGGGTGCCAAAGCGTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR-3UTR CCA 90 bp AAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCGTGAATTCTTCCAATTGCAGCTCCTaGAGAAACTGCGTGAATTCT +
Preference number: 2 (lower is better)
Translates to: KACLACSNCSSWRNCVNSSNCSS*RNCVNS
Trigger: AGAATTCACGCAGTTTCTCCAGGAGCTGCAATTGGA...AGAATTCACGCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
3UTR-3UTR TCA 90 bp CTGTGCAGGATACTAAGTAACTTGGTCTGTCTCCAGGCTCGCCTCTTGAAAATACTAGGAAATGCTTTTTaGTTGATGAACAGAGGAGGG +
Preference number: 2 (lower is better)
Translates to: LCRILSNLVCLQARLLKILGNAF*LMNRGG
Trigger: CCCTCCTCTGTTCATCAATCAAAAAGCATTTCCTAG...TATTTTCAAGAGGCGAGCCTGGAGACAGACCAAGTTACTTAGTATCCTGCACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR-3UTR CCA 90 bp AACACGCTTTGGCACCCTTATACAGACCAAAAATTCCCAAGTCCCGGAGCACATCTTCACTATCTCCAATaGGTTGGTAAAAATGACCTG +
Preference number: 2 (lower is better)
Translates to: NTLWHPYTDQKFPSPGAHLHYLQ*VGKNDL
Trigger: CAGGTCATTTTTACCAACCCATTGGAGATAGTGAAG...ATGTGCTCCGGGACTTGGGAATTTTTGGTCTGTATAAGGGTGCCAAAGCGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR-3UTR TCA 90 bp CTGTGCAGGATACTAAGTAACTTGGTCTGTCTCCAGGCTCGCCTCTTGAAAATATATCCTTTACTCTTTTaGAAGCTTGGCCTTTGCCTT +
Preference number: 2 (lower is better)
Translates to: LCRILSNLVCLQARLLKIYPLLF*KLGLCL
Trigger: AAGGCAAAGGCCAAGCTTTCAAAAGAGTAAAGGATA...TATTTTCAAGAGGCGAGCCTGGAGACAGACCAAGTTACTTAGTATCCTGCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR-3UTR GCA 90 bp CAGCTCCTGGAGAAACTGCGTGAATTCTGTGTAGTTAAGATGCTTCTTCCGGTTCGGTTATGCCCAAAATaGAGTCGGATAAATTCACAA +
Preference number: 2 (lower is better)
Translates to: QLLEKLREFCVVKMLLPVRLCPK*SRINSQ
Trigger: TTGTGAATTTATCCGACTGCATTTTGGGCATAACCG...AACCGGAAGAAGCATCTTAACTACACAGAATTCACGCAGTTTCTCCAGGAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
3UTR-3UTR CCA 90 bp AAACAAGTATATGTATATGTCATACAGAAAGAAGAGTTTGACTCCTCAGCTCAGCTGGGACACCTGCCATaGCTCCAGCTGCAAGAAGAT +
Preference number: 2 (lower is better)
Translates to: KQVYVYVIQKEEFDSSAQLGHLP*LQLQED
Trigger: ATCTTCTTGCAGCTGGAGCCATGGCAGGTGTCCCAG...CTGAGCTGAGGAGTCAAACTCTTCTTTCTGTATGACATATACATATACTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR-3UTR CCA 90 bp AAACAAGTATATGTATATGTCATACAGAAAGAAGAGTTTGACTCCTCAGCTCAGCTGCAAACGTGGCTGTaGCGAGTCTGTATCCACCGA +
Preference number: 2 (lower is better)
Translates to: KQVYVYVIQKEEFDSSAQLQTWL*RVCIHR
Trigger: TCGGTGGATACAGACTCGCCACAGCCACGTTTGCAG...CTGAGCTGAGGAGTCAAACTCTTCTTTCTGTATGACATATACATATACTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR CAA 90 bp ATGATGTCACTGAAATCCAGACCAGAAATCATGCCACTTTTGCTTTaGTCTTTGAGTGCAAAGGCTTGTCTTGCATGTTCCAATTGCAGC +
Preference number: 2 (lower is better)
Translates to: MMSLKSRPEIMPLLL*SLSAKACLACSNCS
Trigger: GCTGCAATTGGAACATGCAAGACAAGCCTTTGCACTCAAAGACAAAAGCAAAAGTGGCATGATTTCTGGTCTGGATTTCAGTGACATCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
3UTR-3UTR TCA 90 bp ATCAATGTAAAACCACCGCTGGAGAAGTTCATAAGTGACCAAGGTAACACCAAACAATTTCTAGTGGTGTaGCTTGTCCATAGCGTATGG +
Preference number: 2 (lower is better)
Translates to: INVKPPLEKFISDQGNTKQFLVV*LVHSVW
Trigger: CCATACGCTATGGACAAGTCACACCACTAGAAATTG...TTTGGTGTTACCTTGGTCACTTATGAACTTCTCCAGCGGTGGTTTTACATTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR-3UTR TCA 90 bp CAAATCACATCCATATCAAAGTGTAGATGTGGCTGTCAAGATCTATGTTTAGATTTTCCATATGCACACTaGCAGGCGAGGAGCTGCCTA +
Preference number: 2 (lower is better)
Translates to: QITSISKCRCGCQDLCLDFPYAH*QARSCL
Trigger: TAGGCAGCTCCTCGCCTGTCAGTGTGCATATGGAAA...ATCTAAACATAGATCTTGACAGCCACATCTACACTTTGATATGGATGTGATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR-3UTR GCA 90 bp ATGTACAATCACTGTAAGTGCAAGCTGTGCAAAGCAGAGTCTAGAACACTAATTCTTGCATGTTCCAATTaGAGCTCCTGGAGAAACTGC +
Preference number: 2 (lower is better)
Translates to: MYNHCKCKLCKAESRTLILACSN*SSWRNC
Trigger: GCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAG...AATTAGTGTTCTAGACTCTGCTTTGCACAGCTTGCACTTACAGTGATTGTACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR-3UTR GCA 90 bp CAAATCACATCCATATCAAAGTGTAGATGTGGCTGTCAAGATCTATGTTTAGATGTCCCTGTTTCCATATaGACACTGACAGGCGAGGAG +
Preference number: 2 (lower is better)
Translates to: QITSISKCRCGCQDLCLDVPVSI*TLTGEE
Trigger: CTCCTCGCCTGTCAGTGTGCATATGGAAACAGGGAC...ATCTAAACATAGATCTTGACAGCCACATCTACACTTTGATATGGATGTGATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR-3UTR CCA 90 bp ATGTACAATCACTGTAAGTGCAAGCTGTGCAAAGCAGAGTCTAGAACACTAATTTACCATGCAGCTGACTaGATACATTACAGGGCTGCT +
Preference number: 2 (lower is better)
Translates to: MYNHCKCKLCKAESRTLIYHAAD*IHYRAA
Trigger: AGCAGCCCTGTAATGTATCCAGTCAGCTGCATGGTA...AATTAGTGTTCTAGACTCTGCTTTGCACAGCTTGCACTTACAGTGATTGTACAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
3UTR CAA 90 bp GTAACCATGATGTCACTGAAATCCAGACCAGAAATCATGCCACTTTaGCTTTTGTCTTTGAGTGCAAAGGCTTGTCTTGCATGTTCCAAT +
Preference number: 2 (lower is better)
Translates to: VTMMSLKSRPEIMPL*LLSLSAKACLACSN
Trigger: ATTGGAACATGCAAGACAAGCCTTTGCACTCAAAGACAAAAGCAAAAGTGGCATGATTTCTGGTCTGGATTTCAGTGACATCATGGTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
3UTR-3UTR TCA 90 bp ATGTACAATCACTGTAAGTGCAAGCTGTGCAAAGCAGAGTCTAGAACACTAATTCACGCCCTTGATGAGTaGCTTTTAGAACAGTTTGCA +
Preference number: 2 (lower is better)
Translates to: MYNHCKCKLCKAESRTLIHALDE*LLEQFA
Trigger: TGCAAACTGTTCTAAAAGTCACTCATCAAGGGCGTG...AATTAGTGTTCTAGACTCTGCTTTGCACAGCTTGCACTTACAGTGATTGTACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR-3UTR GCA 90 bp CAAGTGGTAGTAGCAAAACAACTGTATTATTATTTGTTCCACTCCCATGAGACCTGGCATCCACTGGCATaGATCTTTCCAAAGTATCAC +
Preference number: 2 (lower is better)
Translates to: QVVVAKQLYYYLFHSHETWHPLA*IFPKYH
Trigger: GTGATACTTTGGAAAGATGCATGCCAGTGGATGCCA...GGTCTCATGGGAGTGGAACAAATAATAATACAGTTGTTTTGCTACTACCACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR-3UTR GCA 90 bp GAAGATTTAAACCTCCCACGTGTCCATTTTCATCAGCCAGAAGTAGTTTGCAATCGGTTATGCCCAAAATaGAGTCGGATAAATTCACAA +
Preference number: 2 (lower is better)
Translates to: EDLNLPRVHFHQPEVVCNRLCPK*SRINSQ
Trigger: TTGTGAATTTATCCGACTGCATTTTGGGCATAACCG...ATTGCAAACTACTTCTGGCTGATGAAAATGGACACGTGGGAGGTTTAAATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR-3UTR GCA 90 bp AATATGTACAATCACTGTAAGTGCAAGCTGTGCAAAGCAGAGTCTAGAACACTAGCTTTTGTCTTTGAGTaGAAAGGCTTGTCTTGCATG +
Preference number: 2 (lower is better)
Translates to: NMYNHCKCKLCKAESRTLAFVFE*KGLSCM
Trigger: CATGCAAGACAAGCCTTTGCACTCAAAGACAAAAGC...TAGTGTTCTAGACTCTGCTTTGCACAGCTTGCACTTACAGTGATTGTACATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR-3UTR GCA 90 bp AAACAAGTATATGTATATGTCATACAGAAAGAAGAGTTTGACTCCTCAGCTCAGGATACATTACAGGGCTaGTCTCCTAGGCCTCTTTCT +
Preference number: 2 (lower is better)
Translates to: KQVYVYVIQKEEFDSSAQDTLQG*SPRPLS
Trigger: AGAAAGAGGCCTAGGAGAGCAGCCCTGTAATGTATC...CTGAGCTGAGGAGTCAAACTCTTCTTTCTGTATGACATATACATATACTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
3UTR-3UTR CCA 90 bp ATCAATGTAAAACCACCGCTGGAGAAGTTCATAAGTGACCAAGGTAACACCAAATTTAATGGCCTTTTCTaGAGCAACCCCTATAAGTTG +
Preference number: 2 (lower is better)
Translates to: INVKPPLEKFISDQGNTKFNGLF*SNPYKL
Trigger: CAACTTATAGGGGTTGCTCCAGAAAAGGCCATTAAA...TTTGGTGTTACCTTGGTCACTTATGAACTTCTCCAGCGGTGGTTTTACATTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR-3UTR GCA 90 bp CAAGTGGTAGTAGCAAAACAACTGTATTATTATTTGTTCCACTCCCATGAGACCGAGCTGCCTAGGAAATaGTTTTTGATTGATGAACAG +
Preference number: 2 (lower is better)
Translates to: QVVVAKQLYYYLFHSHETELPRK*FLIDEQ
Trigger: CTGTTCATCAATCAAAAAGCATTTCCTAGGCAGCTC...GGTCTCATGGGAGTGGAACAAATAATAATACAGTTGTTTTGCTACTACCACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR-3UTR TCA 90 bp ATGTACAATCACTGTAAGTGCAAGCTGTGCAAAGCAGAGTCTAGAACACTAATTCATAAGACTAAAGCTTaGAACAGCGTTGTGGTTTTT +
Preference number: 2 (lower is better)
Translates to: MYNHCKCKLCKAESRTLIHKTKA*NSVVVF
Trigger: AAAAACCACAACGCTGTTTCAAGCTTTAGTCTTATG...AATTAGTGTTCTAGACTCTGCTTTGCACAGCTTGCACTTACAGTGATTGTACAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
3UTR-3UTR TCA 90 bp AAACAAGTATATGTATATGTCATACAGAAAGAAGAGTTTGACTCCTCAGCTCAGTCCAGGCTCGCCTCTTaGAAATATTTGCATACATTC +
Preference number: 2 (lower is better)
Translates to: KQVYVYVIQKEEFDSSAQSRLAS*KYLHTF
Trigger: GAATGTATGCAAATATTTTCAAGAGGCGAGCCTGGA...CTGAGCTGAGGAGTCAAACTCTTCTTTCTGTATGACATATACATATACTTGTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR-3UTR GCA 90 bp CAAATCACATCCATATCAAAGTGTAGATGTGGCTGTCAAGATCTATGTTTAGATCACTATGTCTCGTTATaGCTTTTATCAGCAAATACC +
Preference number: 2 (lower is better)
Translates to: QITSISKCRCGCQDLCLDHYVSL*LLSANT
Trigger: GGTATTTGCTGATAAAAGGCATAACGAGACATAGTG...ATCTAAACATAGATCTTGACAGCCACATCTACACTTTGATATGGATGTGATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR GCA 72 bp CTTTTGTTCCTGGAGGGCCTCCAGGGAGCCTACAGTTaGAGTCACAGGGCTGTCAGCCATCAATCGAGGAGC +
Preference number: 3 (lower is better)
Translates to: LLFLEGLQGAYS*SHRAVSHQSRS
Trigger: GCTCCTCGATTGATGGCTGACAGCCCTGTGACTGCAACTGTAGGCTCCCTGGAGGCCCTCCAGGAACAAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR TCA 72 bp CAGTGGCTCCCACAGCTCCAGCAACTGAGCCCAGAGTaGATCTGTAAGCAGACTCGGCAATCTGGAGCCAGA +
Preference number: 3 (lower is better)
Translates to: QWLPQLQQLSPE*ICKQTRQSGAR
Trigger: TCTGGCTCCAGATTGCCGAGTCTGCTTACAGATTCACTCTGGGCTCAGTTGCTGGAGCTGTGGGAGCCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR TCA 72 bp GCAAACGTGGCTGTGGCGAGTCTGTATCCACCGATGTaGTCAGGGTTGGCAGGAGGAAGGTCTGCAATGCGT +
Preference number: 3 (lower is better)
Translates to: ANVAVASLYPPM*SGLAGGRSAMR
Trigger: ACGCATTGCAGACCTTCCTCCTGCCAACCCTGATCACATCGGTGGATACAGACTCGCCACAGCCACGTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR GCA 72 bp TTGCCACACTCAACAGTTGTCTCATCACTGAGTGGCTaGCACTGCTGCCTTTGGCTGAACCACAGCAACACT +
Preference number: 3 (lower is better)
Translates to: LPHSTVVSSLSG*HCCLWLNHSNT
Trigger: AGTGTTGCTGTGGTTCAGCCAAAGGCAGCAGTGGCAGCCACTCAGTGATGAGACAACTGTTGAGTGTGGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR GCA 72 bp GTCACAGGGCTGTCAGCCATCAATCGAGGAGCACTGTaGAGGATACTAAGTAACTTGGTCTGTCTCCAGGCT +
Preference number: 3 (lower is better)
Translates to: VTGLSAINRGAL*RILSNLVCLQA
Trigger: AGCCTGGAGACAGACCAAGTTACTTAGTATCCTGCACAGTGCTCCTCGATTGATGGCTGACAGCCCTGTGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR-3UTR CAA 90 bp TTCAGGGCGCTGACTCTGGGTCCCGTGGTGATCTCTCCAGCTACTTGCAGACGAATGCCACTTTTGCTTTaGTCTTTGAGTGCAAAGGCT +
Preference number: 3 (lower is better)
Translates to: FRALTLGPVVISPATCRRMPLLL*SLSAKA
Trigger: AGCCTTTGCACTCAAAGACAAAAGCAAAAGTGGCAT...TCGTCTGCAAGTAGCTGGAGAGATCACCACGGGACCCAGAGTCAGCGCCCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR TCA 72 bp TCGAAACACTCGAGCTGCAGTCCCTTTCCAAAATGCTaGGGGCCCTTCTTCCCGGAGAATCTTCCTGAAACA +
Preference number: 3 (lower is better)
Translates to: SKHSSCSPFPKC*GPFFPENLPET
Trigger: TGTTTCAGGAAGATTCTCCGGGAAGAAGGGCCCTCAGCATTTTGGAAAGGGACTGCAGCTCGAGTGTTTCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR GCA 72 bp CTGACTCTGGGTCCCGTGGTGATCTCTCCAGCTACTTaGAGACGAATCTTCACTATCTCCAATGGGTTGGTA +
Preference number: 3 (lower is better)
Translates to: LTLGPVVISPAT*RRIFTISNGLV
Trigger: TACCAACCCATTGGAGATAGTGAAGATTCGTCTGCAAGTAGCTGGAGAGATCACCACGGGACCCAGAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR CCA 72 bp CATTTTGCCACACTCAACAGTTGTCTCATCACTGAGTaGCTGCCACTGCTGCCTTTGGCTGAACCACAGCAA +
Preference number: 3 (lower is better)
Translates to: HFATLNSCLITE*LPLLPLAEPQQ
Trigger: TTGCTGTGGTTCAGCCAAAGGCAGCAGTGGCAGCCACTCAGTGATGAGACAACTGTTGAGTGTGGCAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR CCA 72 bp GTTGTCTCATCACTGAGTGGCTGCCACTGCTGCCTTTaGCTGAACCACAGCAACACTAGGAGACTTAAATTT +
Preference number: 3 (lower is better)
Translates to: VVSSLSGCHCCL*LNHSNTRRLKF
Trigger: AAATTTAAGTCTCCTAGTGTTGCTGTGGTTCAGCCAAAGGCAGCAGTGGCAGCCACTCAGTGATGAGACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR-3UTR CAA 90 bp CTGGAGAAACTGCGTGAATTCTGTGTAGTTAAGATGCTTCTTCCGGTTATGCCCTCTTGCATGTTCCAATaGCAGCTCCTGGAGAAACTG +
Preference number: 3 (lower is better)
Translates to: LEKLREFCVVKMLLPVMPSCMFQ*QLLEKL
Trigger: CAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGA...GGGCATAACCGGAAGAAGCATCTTAACTACACAGAATTCACGCAGTTTCTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
3UTR-3UTR CAA 90 bp ATCAATGTAAAACCACCGCTGGAGAAGTTCATAAGTGACCAAGGTAACACCAAAAGAGCCACGCTGGTTTaGCATTCGGGTCTTCACCAG +
Preference number: 3 (lower is better)
Translates to: INVKPPLEKFISDQGNTKRATLV*HSGLHQ
Trigger: CTGGTGAAGACCCGAATGCAAAACCAGCGTGGCTCT...TTTGGTGTTACCTTGGTCACTTATGAACTTCTCCAGCGGTGGTTTTACATTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR-3UTR CAA 90 bp TTTGTTTTCGATGCCTGCAAACGTGGCTGTGGCGAGTCTGTATCCACCGATGTGAAACAGGAAAATAGATaGCAGAGAAGGGAATGTCTC +
Preference number: 3 (lower is better)
Translates to: FVFDACKRGCGESVSTDVKQENR*QRRECL
Trigger: GAGACATTCCCTTCTCTGCAATCTATTTTCCTGTTT...CACATCGGTGGATACAGACTCGCCACAGCCACGTTTGCAGGCATCGAAAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR GCA 72 bp CAAGTCATTAGCCTGGTCCTCTGGCATCCACTGGCATaGATCTTTCCAAAGTATCACTTATTCAGTGGTAGC +
Preference number: 3 (lower is better)
Translates to: QVISLVLWHPLA*IFPKYHLFSGS
Trigger: GCTACCACTGAATAAGTGATACTTTGGAAAGATGCATGCCAGTGGATGCCAGAGGACCAGGCTAATGACTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR GCA 72 bp ATATGCACACTGACAGGCGAGGAGCTGCCTAGGAAATaGTTTTTGATTGATGAACAGAGGAGGGTCTACACA +
Preference number: 3 (lower is better)
Translates to: ICTLTGEELPRK*FLIDEQRRVYT
Trigger: TGTGTAGACCCTCCTCTGTTCATCAATCAAAAAGCATTTCCTAGGCAGCTCCTCGCCTGTCAGTGTGCATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR-3UTR CAA 90 bp TGGAGCAACCCCTATAAGTTGTGGTATCAGACCCCTGTAGAGTCCAAAGAAGCCCTTTTGCTTTTGTCTTaGAGTGCAAAGGCTTGTCTT +
Preference number: 3 (lower is better)
Translates to: WSNPYKLWYQTPVESKEALLLLS*SAKACL
Trigger: AAGACAAGCCTTTGCACTCAAAGACAAAAGCAAAAG...GGCTTCTTTGGACTCTACAGGGGTCTGATACCACAACTTATAGGGGTTGCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR-3UTR CAA 90 bp GGTAAGCGGGACACTTTCCCATCTCACTCTAGATACATACATAGGATTCTTTTGAGGATACTAAGTAACTaGGTCTGTCTCCAGGCTCGC +
Preference number: 3 (lower is better)
Translates to: GKRDTFPSHSRYIHRILLRILSN*VCLQAR
Trigger: GCGAGCCTGGAGACAGACCAAGTTACTTAGTATCCT...CAAAAGAATCCTATGTATGTATCTAGAGTGAGATGGGAAAGTGTCCCGCTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR-3UTR CAA 90 bp CAGCTCCTGGAGAAACTGCGTGAATTCTGTGTAGTTAAGATGCTTCTTCCGGTTTTTGAGTGCAAAGGCTaGTCTTGCATGTTCCAATTG +
Preference number: 3 (lower is better)
Translates to: QLLEKLREFCVVKMLLPVFECKG*SCMFQL
Trigger: CAATTGGAACATGCAAGACAAGCCTTTGCACTCAAA...AACCGGAAGAAGCATCTTAACTACACAGAATTCACGCAGTTTCTCCAGGAGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
3UTR-3UTR CAA 90 bp AAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCGTGAATTCTCTTTTGCTTTTGTCTTaGAGTGCAAAGGCTTGTCTT +
Preference number: 3 (lower is better)
Translates to: KACLACSNCSSWRNCVNSLLLLS*SAKACL
Trigger: AAGACAAGCCTTTGCACTCAAAGACAAAAGCAAAAG...AGAATTCACGCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
3UTR TCA 72 bp CTGCAAGCTGATATAGAATATCAATTTCTAGTGGTGTaGCTTGTCCATAGCGTATGGCACTCTGGGCAAATT +
Preference number: 3 (lower is better)
Translates to: LQADIEYQFLVV*LVHSVWHSGQI
Trigger: AATTTGCCCAGAGTGCCATACGCTATGGACAAGTCACACCACTAGAAATTGATATTCTATATCAGCTTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR GCA 72 bp CTCCCACGTGTCCATTTTCATCAGCCAGAAGTAGTTTaGAATGAGCATAAACAGGAAAATAGATTGCAGAGA +
Preference number: 3 (lower is better)
Translates to: LPRVHFHQPEVV*NEHKQENRLQR
Trigger: TCTCTGCAATCTATTTTCCTGTTTATGCTCATTGCAAACTACTTCTGGCTGATGAAAATGGACACGTGGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR TCA 72 bp ACAAGTATATGTATATGTCATACAGAAAGAAGAGTTTaGCTCCTCAGCTCAGTCAGTACCATGCAGCTGACT +
Preference number: 3 (lower is better)
Translates to: TSICICHTERRV*LLSSVSTMQLT
Trigger: AGTCAGCTGCATGGTACTGACTGAGCTGAGGAGTCAAACTCTTCTTTCTGTATGACATATACATATACTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
3UTR-3UTR CAA 90 bp ATTTTTCTGTTTTCTATAAAGGTGGAAGAAAGGGCGAACCCGATCATGAGTTATTACTCTTTTGAAAGCTaGGCCTTTGCCTTACTGTGT +
Preference number: 3 (lower is better)
Translates to: IFLFSIKVEERANPIMSYYSFES*AFALLC
Trigger: ACACAGTAAGGCAAAGGCCAAGCTTTCAAAAGAGTA...ATAACTCATGATCGGGTTCGCCCTTTCTTCCACCTTTATAGAAAACAGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR-3UTR CAA 90 bp CAAGTGGTAGTAGCAAAACAACTGTATTATTATTTGTTCCACTCCCATGAGACCCCGATCATGAGTTATTaGCAATCAGTAGTCAATCAG +
Preference number: 3 (lower is better)
Translates to: QVVVAKQLYYYLFHSHETPIMSY*QSVVNQ
Trigger: CTGATTGACTACTGATTGCAAATAACTCATGATCGG...GGTCTCATGGGAGTGGAACAAATAATAATACAGTTGTTTTGCTACTACCACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR TCA 72 bp GTCAAGCGCCCTGAAGCATTATATAAGTCTGCAAGCTaGTATAGAATATCAATTTCTAGTGGTGTGACTTGT +
Preference number: 3 (lower is better)
Translates to: VKRPEALYKSAS*YRISISSGVTC
Trigger: ACAAGTCACACCACTAGAAATTGATATTCTATATCAGCTTGCAGACTTATATAATGCTTCAGGGCGCTTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
3UTR CCA 72 bp GAAATTGTGAAAGTATCCTTTACTCTTTTGAAAGCTTaGCCTTTGCCTTACTGTGTCAAAGGAAAGCAAAAC +
Preference number: 3 (lower is better)
Translates to: EIVKVSFTLLKA*PLPYCVKGKQN
Trigger: GTTTTGCTTTCCTTTGACACAGTAAGGCAAAGGCCAAGCTTTCAAAAGAGTAAAGGATACTTTCACAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR GCA 90 bp CTGGAGGGCCTCCAGGGAGCCTACAGTTGCAGTCACAGGGCTGTCAGCCATCAATGCAGCTGGGACACCTaGCATGGCTCCAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: LEGLQGAYSCSHRAVSHQCSWDT*HGSSCK
Trigger: CTTGCAGCTGGAGCCATGGCAGGTGTCCCAGCTGCA...TTGATGGCTGACAGCCCTGTGACTGCAACTGTAGGCTCCCTGGAGGCCCTCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR TCA 90 bp CTGGAGGGCCTCCAGGGAGCCTACAGTTGCAGTCACAGGGCTGTCAGCCATCAACCCTTTCCAAAATGCTaGGGGCCCTTCTTCCCGGAG +
Preference number: 4 (lower is better)
Translates to: LEGLQGAYSCSHRAVSHQPFPKC*GPFFPE
Trigger: CTCCGGGAAGAAGGGCCCTCAGCATTTTGGAAAGGG...TTGATGGCTGACAGCCCTGTGACTGCAACTGTAGGCTCCCTGGAGGCCCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR TCA 90 bp GGCCTCCAGGGAGCCTACAGTTGCAGTCACAGGGCTGTCAGCCATCAATCGAGGCTGTATCCACCGATGTaGTCAGGGTTGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GLQGAYSCSHRAVSHQSRLYPPM*SGLAGG
Trigger: TCCTCCTGCCAACCCTGATCACATCGGTGGATACAG...CCTCGATTGATGGCTGACAGCCCTGTGACTGCAACTGTAGGCTCCCTGGAGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR GCA 90 bp CTGGAGGGCCTCCAGGGAGCCTACAGTTGCAGTCACAGGGCTGTCAGCCATCAAGAGCCACGCTGGTTTTaGATTCGGGTCTTCACCAGA +
Preference number: 4 (lower is better)
Translates to: LEGLQGAYSCSHRAVSHQEPRWF*IRVFTR
Trigger: TCTGGTGAAGACCCGAATGCAAAACCAGCGTGGCTC...TTGATGGCTGACAGCCCTGTGACTGCAACTGTAGGCTCCCTGGAGGCCCTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR GCA 90 bp CTAATTCTTTTGTTCCTGGAGGGCCTCCAGGGAGCCTACAGTTGCAGTCACAGGTTGACCGCCATGCTGTaGTCGGAAGCCGGGGACGAG +
Preference number: 4 (lower is better)
Translates to: LILLFLEGLQGAYSCSHRLTAML*SEAGDE
Trigger: CTCGTCCCCGGCTTCCGAGCACAGCATGGCGGTCAA...CCTGTGACTGCAACTGTAGGCTCCCTGGAGGCCCTCCAGGAACAAAAGAATTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR CAA 72 bp TCTTTTGTTCCTGGAGGGCCTCCAGGGAGCCTACAGTaGCAGTCACAGGGCTGTCAGCCATCAATCGAGGAG +
Preference number: 4 (lower is better)
Translates to: SFVPGGPPGSLQ*QSQGCQPSIEE
Trigger: CTCCTCGATTGATGGCTGACAGCCCTGTGACTGCAACTGTAGGCTCCCTGGAGGCCCTCCAGGAACAAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR TCA 90 bp CTGGGTCCCGTGGTGATCTCTCCAGCTACTTGCAGACGAATCTTCACTATCTCCCAGTTGTCTCATCACTaGGTGGCTGCCACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LGPVVISPATCRRIFTISQLSHH*VAATAA
Trigger: GGCAGCAGTGGCAGCCACTCAGTGATGAGACAACTG...GGAGATAGTGAAGATTCGTCTGCAAGTAGCTGGAGAGATCACCACGGGACCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR TCA 90 bp CTGGAGGGCCTCCAGGGAGCCTACAGTTGCAGTCACAGGGCTGTCAGCCATCAAACTGGAAAGCCACTATaGACATGGAATCTGGAGCAC +
Preference number: 4 (lower is better)
Translates to: LEGLQGAYSCSHRAVSHQTGKPL*TWNLEH
Trigger: GTGCTCCAGATTCCATGTTCATAGTGGCTTTCCAGT...TTGATGGCTGACAGCCCTGTGACTGCAACTGTAGGCTCCCTGGAGGCCCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR GCA 90 bp TGCAGTCACAGGGCTGTCAGCCATCAATCGAGGAGCACTGTGCAGGATACTAAGCTGAGTGGCTGCCACTaGTGCCTTTGGCTGAACCAC +
Preference number: 4 (lower is better)
Translates to: CSHRAVSHQSRSTVQDTKLSGCH*CLWLNH
Trigger: GTGGTTCAGCCAAAGGCAGCAGTGGCAGCCACTCAG...CTTAGTATCCTGCACAGTGCTCCTCGATTGATGGCTGACAGCCCTGTGACTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR GCA 90 bp CTGGAGGGCCTCCAGGGAGCCTACAGTTGCAGTCACAGGGCTGTCAGCCATCAAGATACATTACAGGGCTaGTCTCCTAGGCCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: LEGLQGAYSCSHRAVSHQDTLQG*SPRPLS
Trigger: AGAAAGAGGCCTAGGAGAGCAGCCCTGTAATGTATC...TTGATGGCTGACAGCCCTGTGACTGCAACTGTAGGCTCCCTGGAGGCCCTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CCA 90 bp GGCCTCCAGGGAGCCTACAGTTGCAGTCACAGGGCTGTCAGCCATCAATCGAGGTCCAATTGCAGCTCCTaGAGAAACTGCGTGAATTCT +
Preference number: 4 (lower is better)
Translates to: GLQGAYSCSHRAVSHQSRSNCSS*RNCVNS
Trigger: AGAATTCACGCAGTTTCTCCAGGAGCTGCAATTGGA...CCTCGATTGATGGCTGACAGCCCTGTGACTGCAACTGTAGGCTCCCTGGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CCA 90 bp CTGGAGGGCCTCCAGGGAGCCTACAGTTGCAGTCACAGGGCTGTCAGCCATCAAAACTTCTGCTGGAAGTaGAACAGAGCCATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LEGLQGAYSCSHRAVSHQNFCWK*NRAISS
Trigger: AGAAGAGATGGCTCTGTTCCACTTCCAGCAGAAGTT...TTGATGGCTGACAGCCCTGTGACTGCAACTGTAGGCTCCCTGGAGGCCCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR TCA 90 bp TGCAGTCACAGGGCTGTCAGCCATCAATCGAGGAGCACTGTGCAGGATACTAAGCACAGCTCCAGCAACTaGGCCCAGAGTGAATCTGTA +
Preference number: 4 (lower is better)
Translates to: CSHRAVSHQSRSTVQDTKHSSSN*AQSESV
Trigger: TACAGATTCACTCTGGGCTCAGTTGCTGGAGCTGTG...CTTAGTATCCTGCACAGTGCTCCTCGATTGATGGCTGACAGCCCTGTGACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR TCA 90 bp CTGGAGGGCCTCCAGGGAGCCTACAGTTGCAGTCACAGGGCTGTCAGCCATCAATCCAGGCTCGCCTCTTaGAAATATTTGCATACATTC +
Preference number: 4 (lower is better)
Translates to: LEGLQGAYSCSHRAVSHQSRLAS*KYLHTF
Trigger: GAATGTATGCAAATATTTTCAAGAGGCGAGCCTGGA...TTGATGGCTGACAGCCCTGTGACTGCAACTGTAGGCTCCCTGGAGGCCCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR GCA 90 bp ATCAGCACACACAAGTCATTAGCCTGGTCCTCTGGCATCCACTGGCATGCATCTCCTCGCTTAGTTGTCTaGACCTTGACCGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: ISTHKSLAWSSGIHWHASPRLVV*TLTAML
Trigger: CAGCATGGCGGTCAAGGTGCAGACAACTAAGCGAGG...AGATGCATGCCAGTGGATGCCAGAGGACCAGGCTAATGACTTGTGTGTGCTGAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CCA 90 bp TGCAGTCACAGGGCTGTCAGCCATCAATCGAGGAGCACTGTGCAGGATACTAAGCGATGTGATCAGGGTTaGCAGGAGGAAGGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: CSHRAVSHQSRSTVQDTKRCDQG*QEEGLQ
Trigger: TTGCAGACCTTCCTCCTGCCAACCCTGATCACATCG...CTTAGTATCCTGCACAGTGCTCCTCGATTGATGGCTGACAGCCCTGTGACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CCA 90 bp TTTGTTTTCGATGCCTGCAAACGTGGCTGTGGCGAGTCTGTATCCACCGATGTGCGATGCCTGCAAACGTaGCTGTGGCGAGTCTGTATC +
Preference number: 4 (lower is better)
Translates to: FVFDACKRGCGESVSTDVRCLQT*LWRVCI
Trigger: GATACAGACTCGCCACAGCCACGTTTGCAGGCATCG...CACATCGGTGGATACAGACTCGCCACAGCCACGTTTGCAGGCATCGAAAACAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CCA 90 bp CTAATTCTTTTGTTCCTGGAGGGCCTCCAGGGAGCCTACAGTTGCAGTCACAGGCACAAGTCATTAGCCTaGTCCTCTGGCATCCACTGG +
Preference number: 4 (lower is better)
Translates to: LILLFLEGLQGAYSCSHRHKSLA*SSGIHW
Trigger: CCAGTGGATGCCAGAGGACCAGGCTAATGACTTGTG...CCTGTGACTGCAACTGTAGGCTCCCTGGAGGCCCTCCAGGAACAAAAGAATTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CCA 90 bp TTGAGTGCAAAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCCCCTCTGACCGGGGCTaGCACTCTTCTCCAAGACTG +
Preference number: 4 (lower is better)
Translates to: LSAKACLACSNCSSWRNCPSDRG*HSSPRL
Trigger: CAGTCTTGGAGAAGAGTGCCAGCCCCGGTCAGAGGG...GCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTTTGCACTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475360.6
3UTR CAA 72 bp GCTGACTCTGGGTCCCGTGGTGATCTCTCCAGCTACTaGCAGACGAATCTTCACTATCTCCAATGGGTTGGT +
Preference number: 4 (lower is better)
Translates to: ADSGSRGDLSSY*QTNLHYLQWVG
Trigger: ACCAACCCATTGGAGATAGTGAAGATTCGTCTGCAAGTAGCTGGAGAGATCACCACGGGACCCAGAGTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR TCA 90 bp TGCAGTCACAGGGCTGTCAGCCATCAATCGAGGAGCACTGTGCAGGATACTAAGAACCCATCCTTGGTTTaGTCAGCTACTCCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: CSHRAVSHQSRSTVQDTKNPSLV*SATPAK
Trigger: CTTGGCAGGAGTAGCTGATCAAACCAAGGATGGGTT...CTTAGTATCCTGCACAGTGCTCCTCGATTGATGGCTGACAGCCCTGTGACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CCA 90 bp ATCAGCACACACAAGTCATTAGCCTGGTCCTCTGGCATCCACTGGCATGCATCTTGCCACTGCTGCCTTTaGCTGAACCACAGCAACACT +
Preference number: 4 (lower is better)
Translates to: ISTHKSLAWSSGIHWHASCHCCL*LNHSNT
Trigger: AGTGTTGCTGTGGTTCAGCCAAAGGCAGCAGTGGCA...AGATGCATGCCAGTGGATGCCAGAGGACCAGGCTAATGACTTGTGTGTGCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CCA 90 bp ATCAGCACACACAAGTCATTAGCCTGGTCCTCTGGCATCCACTGGCATGCATCTATTAGCCTGGTCCTCTaGCATCCACTGGCATGCATC +
Preference number: 4 (lower is better)
Translates to: ISTHKSLAWSSGIHWHASISLVL*HPLACI
Trigger: GATGCATGCCAGTGGATGCCAGAGGACCAGGCTAAT...AGATGCATGCCAGTGGATGCCAGAGGACCAGGCTAATGACTTGTGTGTGCTGAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR TCA 90 bp TCCCGTGGTGATCTCTCCAGCTACTTGCAGACGAATCTTCACTATCTCCAATGGGAAGCTAACCTGGTGTaGGATACTTCCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SRGDLSSYLQTNLHYLQWEANLV*DTSSSC
Trigger: GCAGCTGGAGGAAGTATCTCACACCAGGTTAGCTTC...CCATTGGAGATAGTGAAGATTCGTCTGCAAGTAGCTGGAGAGATCACCACGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR TCA 90 bp CTGGAGGGCCTCCAGGGAGCCTACAGTTGCAGTCACAGGGCTGTCAGCCATCAACATAAGACTAAAGCTTaGAACAGCGTTGTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: LEGLQGAYSCSHRAVSHQHKTKA*NSVVVF
Trigger: AAAAACCACAACGCTGTTTCAAGCTTTAGTCTTATG...TTGATGGCTGACAGCCCTGTGACTGCAACTGTAGGCTCCCTGGAGGCCCTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR GCA 90 bp AGTGCAAAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCGTGGAGCCACGCTGGTTTTaGATTCGGGTCTTCACCAGA +
Preference number: 4 (lower is better)
Translates to: SAKACLACSNCSSWRNCVEPRWF*IRVFTR
Trigger: TCTGGTGAAGACCCGAATGCAAAACCAGCGTGGCTC...CACGCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTTTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR GCA 90 bp TCCCGGAGAATCTTCCTGAAACAGTCGATGACACCACTGTATGTCGTCTGGCCATCCAGCAAGAACTTCTaGTGGAAGTGGAACAGAGCC +
Preference number: 4 (lower is better)
Translates to: SRRIFLKQSMTPLYVVWPSSKNF*WKWNRA
Trigger: GGCTCTGTTCCACTTCCAGCAGAAGTTCTTGCTGGA...TGGCCAGACGACATACAGTGGTGTCATCGACTGTTTCAGGAAGATTCTCCGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR GCA 90 bp CTGGAGAAACTGCGTGAATTCTGTGTAGTTAAGATGCTTCTTCCGGTTATGCCCCTGAGTGGCTGCCACTaGTGCCTTTGGCTGAACCAC +
Preference number: 4 (lower is better)
Translates to: LEKLREFCVVKMLLPVMPLSGCH*CLWLNH
Trigger: GTGGTTCAGCCAAAGGCAGCAGTGGCAGCCACTCAG...GGGCATAACCGGAAGAAGCATCTTAACTACACAGAATTCACGCAGTTTCTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CCA 90 bp AAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCGTGAATTCTGCAGACTCGGCAATCTaGAGCCAGATAGGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: KACLACSNCSSWRNCVNSADSAI*SQIGLP
Trigger: AGGCAGGCCTATCTGGCTCCAGATTGCCGAGTCTGC...AGAATTCACGCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR TCA 90 bp AAAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCGTGAATTCCTGTATCCACCGATGTaGTCAGGGTTGGCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: KGLSCMFQLQLLEKLREFLYPPM*SGLAGG
Trigger: TCCTCCTGCCAACCCTGATCACATCGGTGGATACAG...GAATTCACGCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR TCA 90 bp TCCCGTGGTGATCTCTCCAGCTACTTGCAGACGAATCTTCACTATCTCCAATGGTCAGTACCATGCAGCTaGCTGGATACATTACAGGGC +
Preference number: 4 (lower is better)
Translates to: SRGDLSSYLQTNLHYLQWSVPCS*LDTLQG
Trigger: GCCCTGTAATGTATCCAGTCAGCTGCATGGTACTGA...CCATTGGAGATAGTGAAGATTCGTCTGCAAGTAGCTGGAGAGATCACCACGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR TCA 90 bp AAAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCGTGAATTCTTCATTTCTTCCCTCTaGCCGGGGCTGGCACTCTTC +
Preference number: 4 (lower is better)
Translates to: KGLSCMFQLQLLEKLREFFISSL*PGLALF
Trigger: GAAGAGTGCCAGCCCCGGTCAGAGGGAAGAAATGAA...GAATTCACGCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475360.6
CDS-3UTR GCA 90 bp TCCCGGAGAATCTTCCTGAAACAGTCGATGACACCACTGTATGTCGTCTGGCCACTTGCATGTTCCAATTaGAGCTCCTGGAGAAACTGC +
Preference number: 4 (lower is better)
Translates to: SRRIFLKQSMTPLYVVWPLACSN*SSWRNC
Trigger: GCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAG...TGGCCAGACGACATACAGTGGTGTCATCGACTGTTTCAGGAAGATTCTCCGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR GCA 90 bp TCCCGGAGAATCTTCCTGAAACAGTCGATGACACCACTGTATGTCGTCTGGCCAGATACATTACAGGGCTaGTCTCCTAGGCCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: SRRIFLKQSMTPLYVVWPDTLQG*SPRPLS
Trigger: AGAAAGAGGCCTAGGAGAGCAGCCCTGTAATGTATC...TGGCCAGACGACATACAGTGGTGTCATCGACTGTTTCAGGAAGATTCTCCGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CCA 90 bp CTGGAGAAACTGCGTGAATTCTGTGTAGTTAAGATGCTTCTTCCGGTTATGCCCGAGCCAGAGCCACGCTaGTTTTGCATTCGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: LEKLREFCVVKMLLPVMPEPEPR*FCIRVF
Trigger: GAAGACCCGAATGCAAAACCAGCGTGGCTCTGGCTC...GGGCATAACCGGAAGAAGCATCTTAACTACACAGAATTCACGCAGTTTCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CCA 90 bp AAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCGTGAATTCTCTGGGACACCTGCCATaGCTCCAGCTGCAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: KACLACSNCSSWRNCVNSLGHLP*LQLQED
Trigger: ATCTTCTTGCAGCTGGAGCCATGGCAGGTGTCCCAG...AGAATTCACGCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CCA 90 bp AAGATGCTTCTTCCGGTTATGCCCAAAATGCAGTCGGATAAATTCACAATCCCACACCAGAGATGCAGCTaGGACACCTGCCATGGCTCC +
Preference number: 4 (lower is better)
Translates to: KMLLPVMPKMQSDKFTIPHQRCS*DTCHGS
Trigger: GGAGCCATGGCAGGTGTCCCAGCTGCATCTCTGGTG...TGGGATTGTGAATTTATCCGACTGCATTTTGGGCATAACCGGAAGAAGCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CCA 90 bp AGTGCAAAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCGTGGGCATTGGATGTCACTaGGGAGATGGGATTCTCATC +
Preference number: 4 (lower is better)
Translates to: SAKACLACSNCSSWRNCVGIGCH*GDGILI
Trigger: GATGAGAATCCCATCTCCCCAGTGACATCCAATGCC...CACGCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTTTGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475360.6
CDS-3UTR TCA 90 bp GGTAAGCGGGACACTTTCCCATCTCACTCTAGATACATACATAGGATTCTTTTGCAGTTGTCTCATCACTaGGTGGCTGCCACTGCTGCC +
Preference number: 4 (lower is better)
Translates to: GKRDTFPSHSRYIHRILLQLSHH*VAATAA
Trigger: GGCAGCAGTGGCAGCCACTCAGTGATGAGACAACTG...CAAAAGAATCCTATGTATGTATCTAGAGTGAGATGGGAAAGTGTCCCGCTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR GCA 90 bp AATGGTAACCATGATGTCACTGAAATCCAGACCAGAAATCATGCCACTTTTGCTGAGCCTGGAAGGAGCTaGTGTACCAACGGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: NGNHDVTEIQTRNHATFAEPGRS*CTNGVA
Trigger: GGCCACACCGTTGGTACAGCAGCTCCTTCCAGGCTC...AGCAAAAGTGGCATGATTTCTGGTCTGGATTTCAGTGACATCATGGTTACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475360.6
CDS-3UTR CCA 90 bp TTTGGCACCCTTATACAGACCAAAAATTCCCAAGTCCCGGAGCACATTCAGGGCCTTGTCCATAGCGTATaGCACTCTGGGCAAATTCCT +
Preference number: 4 (lower is better)
Translates to: FGTLIQTKNSQVPEHIQGLVHSV*HSGQIP
Trigger: AGGAATTTGCCCAGAGTGCCATACGCTATGGACAAG...GCCCTGAATGTGCTCCGGGACTTGGGAATTTTTGGTCTGTATAAGGGTGCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CCA 90 bp CTAATTCTTTTGTTCCTGGAGGGCCTCCAGGGAGCCTACAGTTGCAGTCACAGGACTCTTTTGAAAGCTTaGCCTTTGCCTTACTGTGTC +
Preference number: 4 (lower is better)
Translates to: LILLFLEGLQGAYSCSHRTLLKA*PLPYCV
Trigger: GACACAGTAAGGCAAAGGCCAAGCTTTCAAAAGAGT...CCTGTGACTGCAACTGTAGGCTCCCTGGAGGCCCTCCAGGAACAAAAGAATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CCA 90 bp CTGGAGAAACTGCGTGAATTCTGTGTAGTTAAGATGCTTCTTCCGGTTATGCCCGCTGTACCAACGGTGTaGCCAGAGAACTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LEKLREFCVVKMLLPVMPAVPTV*PENSSF
Trigger: AAAGGAGGAGTTCTCTGGCCACACCGTTGGTACAGC...GGGCATAACCGGAAGAAGCATCTTAACTACACAGAATTCACGCAGTTTCTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475360.6
CDS-3UTR CCA 90 bp TTGAGTGCAAAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCGTTGGAAGAAGGCATTaGATGTCACTGGGGAGATGG +
Preference number: 4 (lower is better)
Translates to: LSAKACLACSNCSSWRNCVGRRH*MSLGRW
Trigger: CCATCTCCCCAGTGACATCCAATGCCTTCTTCCAAC...GCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTTTGCACTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475360.6
CDS-3UTR TCA 90 bp TTGAGTGCAAAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCTTTCCATCCTTGGTTTaGTCAGCTACTCCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: LSAKACLACSNCSSWRNCFPSLV*SATPAK
Trigger: CTTGGCAGGAGTAGCTGATCAAACCAAGGATGGAAA...GCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTTTGCACTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR TCA 90 bp GAAGATTTAAACCTCCCACGTGTCCATTTTCATCAGCCAGAAGTAGTTTGCAATCCCTTTCCAAAATGCTaGGGGCCCTTCTTCCCGGAG +
Preference number: 4 (lower is better)
Translates to: EDLNLPRVHFHQPEVVCNPFPKC*GPFFPE
Trigger: CTCCGGGAAGAAGGGCCCTCAGCATTTTGGAAAGGG...ATTGCAAACTACTTCTGGCTGATGAAAATGGACACGTGGGAGGTTTAAATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR TCA 90 bp AAGATGCTTCTTCCGGTTATGCCCAAAATGCAGTCGGATAAATTCACAATCCCACTTAGGTGTTGGTTCTaGACCAGCGGGTTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: KMLLPVMPKMQSDKFTIPLRCWF*TSGFEA
Trigger: GGCCTCAAACCCGCTGGTTCAGAACCAACACCTAAG...TGGGATTGTGAATTTATCCGACTGCATTTTGGGCATAACCGGAAGAAGCATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR TCA 90 bp AGTGCAAAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCGTGACAGAAAGAAGAGTTTaGCTCCTCAGCTCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: SAKACLACSNCSSWRNCVTERRV*LLSSVS
Trigger: ACTGACTGAGCTGAGGAGTCAAACTCTTCTTTCTGT...CACGCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTTTGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR TCA 90 bp AAAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCGTGAATTCAACCCATCCTTGGTTTaGTCAGCTACTCCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: KGLSCMFQLQLLEKLREFNPSLV*SATPAK
Trigger: CTTGGCAGGAGTAGCTGATCAAACCAAGGATGGGTT...GAATTCACGCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475360.6
CDS-3UTR TCA 90 bp TTGAGTGCAAAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCACTGGAAAGCCACTATaGACATGGAATCTGGAGCAC +
Preference number: 4 (lower is better)
Translates to: LSAKACLACSNCSSWRNCTGKPL*TWNLEH
Trigger: GTGCTCCAGATTCCATGTTCATAGTGGCTTTCCAGT...GCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTTTGCACTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475360.6
CDS-3UTR TCA 90 bp ATCAGCACACACAAGTCATTAGCCTGGTCCTCTGGCATCCACTGGCATGCATCTCTAGGAAATGCTTTTTaGTTGATGAACAGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: ISTHKSLAWSSGIHWHASLGNAF*LMNRGG
Trigger: CCCTCCTCTGTTCATCAATCAAAAAGCATTTCCTAG...AGATGCATGCCAGTGGATGCCAGAGGACCAGGCTAATGACTTGTGTGTGCTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR GCA 90 bp TTGAGTGCAAAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCCTTGCATGTTCCAATTaGAGCTCCTGGAGAAACTGC +
Preference number: 4 (lower is better)
Translates to: LSAKACLACSNCSSWRNCLACSN*SSWRNC
Trigger: GCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAG...GCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTTTGCACTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
CDS-3UTR GCA 90 bp CAGCTCCTGGAGAAACTGCGTGAATTCTGTGTAGTTAAGATGCTTCTTCCGGTTACTCTTCTCCAAGACTaGCACCATGCCTGTTCCATG +
Preference number: 4 (lower is better)
Translates to: QLLEKLREFCVVKMLLPVTLLQD*HHACSM
Trigger: CATGGAACAGGCATGGTGGCAGTCTTGGAGAAGAGT...AACCGGAAGAAGCATCTTAACTACACAGAATTCACGCAGTTTCTCCAGGAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475360.6
CDS-3UTR CCA 90 bp CTAATTCTTTTGTTCCTGGAGGGCCTCCAGGGAGCCTACAGTTGCAGTCACAGGCTTCACTATCTCCAATaGGTTGGTAAAAATGACCTG +
Preference number: 4 (lower is better)
Translates to: LILLFLEGLQGAYSCSHRLHYLQ*VGKNDL
Trigger: CAGGTCATTTTTACCAACCCATTGGAGATAGTGAAG...CCTGTGACTGCAACTGTAGGCTCCCTGGAGGCCCTCCAGGAACAAAAGAATTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CCA 90 bp CAAGTGGTAGTAGCAAAACAACTGTATTATTATTTGTTCCACTCCCATGAGACCCACCAGAGATGCAGCTaGGACACCTGCCATGGCTCC +
Preference number: 4 (lower is better)
Translates to: QVVVAKQLYYYLFHSHETHQRCS*DTCHGS
Trigger: GGAGCCATGGCAGGTGTCCCAGCTGCATCTCTGGTG...GGTCTCATGGGAGTGGAACAAATAATAATACAGTTGTTTTGCTACTACCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CCA 90 bp AAGGTGGAAGAAAGGGCGAACCCGATCATGAGTTATTTGCAATCAGTAGTCAATCGATGCCTGCAAACGTaGCTGTGGCGAGTCTGTATC +
Preference number: 4 (lower is better)
Translates to: KVEERANPIMSYLQSVVNRCLQT*LWRVCI
Trigger: GATACAGACTCGCCACAGCCACGTTTGCAGGCATCG...ATTGACTACTGATTGCAAATAACTCATGATCGGGTTCGCCCTTTCTTCCACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR TCA 90 bp AAGATGCTTCTTCCGGTTATGCCCAAAATGCAGTCGGATAAATTCACAATCCCACAACTGAGCCCAGAGTaGATCTGTAAGCAGACTCGG +
Preference number: 4 (lower is better)
Translates to: KMLLPVMPKMQSDKFTIPQLSPE*ICKQTR
Trigger: CCGAGTCTGCTTACAGATTCACTCTGGGCTCAGTTG...TGGGATTGTGAATTTATCCGACTGCATTTTGGGCATAACCGGAAGAAGCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR TCA 90 bp AAGATGCTTCTTCCGGTTATGCCCAAAATGCAGTCGGATAAATTCACAATCCCAACCATGCCTGTTCCATaGATGAGCCTGGAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: KMLLPVMPKMQSDKFTIPTMPVP*MSLEGA
Trigger: AGCTCCTTCCAGGCTCATTCATGGAACAGGCATGGT...TGGGATTGTGAATTTATCCGACTGCATTTTGGGCATAACCGGAAGAAGCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475360.6
CDS-3UTR GCA 90 bp AACACGCTTTGGCACCCTTATACAGACCAAAAATTCCCAAGTCCCGGAGCACATTGCTTCTTCCGGTTATaGCCAAAATGCAGTCGGATA +
Preference number: 4 (lower is better)
Translates to: NTLWHPYTDQKFPSPGAHCFFRL*PKCSRI
Trigger: TATCCGACTGCATTTTGGGCATAACCGGAAGAAGCA...ATGTGCTCCGGGACTTGGGAATTTTTGGTCTGTATAAGGGTGCCAAAGCGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR GCA 90 bp TTGAGTGCAAAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCTGCAAAGGCTTGTCTTaGATGTTCCAATTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: LSAKACLACSNCSSWRNCCKGLS*MFQLQL
Trigger: GAGCTGCAATTGGAACATGCAAGACAAGCCTTTGCA...GCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTTTGCACTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
CDS-3UTR GCA 90 bp CTAATTCTTTTGTTCCTGGAGGGCCTCCAGGGAGCCTACAGTTGCAGTCACAGGTTGTGCCAGCTAGAGTaGTATATATCTTACGAACAA +
Preference number: 4 (lower is better)
Translates to: LILLFLEGLQGAYSCSHRLCQLE*YISYEQ
Trigger: TTGTTCGTAAGATATATAGCACTCTAGCTGGCACAA...CCTGTGACTGCAACTGTAGGCTCCCTGGAGGCCCTCCAGGAACAAAAGAATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR GCA 90 bp TCCCGGAGAATCTTCCTGAAACAGTCGATGACACCACTGTATGTCGTCTGGCCACAGCCAGAAGTAGTTTaGAATGAGCATAAACAGGAA +
Preference number: 4 (lower is better)
Translates to: SRRIFLKQSMTPLYVVWPQPEVV*NEHKQE
Trigger: TTCCTGTTTATGCTCATTGCAAACTACTTCTGGCTG...TGGCCAGACGACATACAGTGGTGTCATCGACTGTTTCAGGAAGATTCTCCGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR GCA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCATTGACCGCCATGCTGTaGTCGGAAGCCGGGGACGAG +
Preference number: 4 (lower is better)
Translates to: VLYILRTSSMLFSNELNALTAML*SEAGDE
Trigger: CTCGTCCCCGGCTTCCGAGCACAGCATGGCGGTCAA...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426896.5
CDS-3UTR GCA 90 bp CAAGTGGTAGTAGCAAAACAACTGTATTATTATTTGTTCCACTCCCATGAGACCCAGGGAGCCTACAGTTaGAGTCACAGGGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: QVVVAKQLYYYLFHSHETQGAYS*SHRAVS
Trigger: GCTGACAGCCCTGTGACTGCAACTGTAGGCTCCCTG...GGTCTCATGGGAGTGGAACAAATAATAATACAGTTGTTTTGCTACTACCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CCA 90 bp CTGGGTCCCGTGGTGATCTCTCCAGCTACTTGCAGACGAATCTTCACTATCTCCCATCAACCTCAGTACTaGCATACTGTAGAAATATGT +
Preference number: 4 (lower is better)
Translates to: LGPVVISPATCRRIFTISHQPQY*HTVEIC
Trigger: ACATATTTCTACAGTATGCCAGTACTGAGGTTGATG...GGAGATAGTGAAGATTCGTCTGCAAGTAGCTGGAGAGATCACCACGGGACCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CCA 90 bp TTGAGTGCAAAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCTCCAATTGCAGCTCCTaGAGAAACTGCGTGAATTCT +
Preference number: 4 (lower is better)
Translates to: LSAKACLACSNCSSWRNCSNCSS*RNCVNS
Trigger: AGAATTCACGCAGTTTCTCCAGGAGCTGCAATTGGA...GCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTTTGCACTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
CDS-3UTR CCA 90 bp CAGCTCCTGGAGAAACTGCGTGAATTCTGTGTAGTTAAGATGCTTCTTCCGGTTGGAGGAAACACGCTTTaGCACCCTTATACAGACCAA +
Preference number: 4 (lower is better)
Translates to: QLLEKLREFCVVKMLLPVGGNTL*HPYTDQ
Trigger: TTGGTCTGTATAAGGGTGCCAAAGCGTGTTTCCTCC...AACCGGAAGAAGCATCTTAACTACACAGAATTCACGCAGTTTCTCCAGGAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CCA 90 bp AATGGTAACCATGATGTCACTGAAATCCAGACCAGAAATCATGCCACTTTTGCTCTGCAAACGTGGCTGTaGCGAGTCTGTATCCACCGA +
Preference number: 4 (lower is better)
Translates to: NGNHDVTEIQTRNHATFALQTWL*RVCIHR
Trigger: TCGGTGGATACAGACTCGCCACAGCCACGTTTGCAG...AGCAAAAGTGGCATGATTTCTGGTCTGGATTTCAGTGACATCATGGTTACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CCA 90 bp AAAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCGTGAATTCTACCATGCAGCTGACTaGATACATTACAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: KGLSCMFQLQLLEKLREFYHAAD*IHYRAA
Trigger: AGCAGCCCTGTAATGTATCCAGTCAGCTGCATGGTA...GAATTCACGCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR TCA 90 bp CAGCTCCTGGAGAAACTGCGTGAATTCTGTGTAGTTAAGATGCTTCTTCCGGTTCAATTTCTAGTGGTGTaGCTTGTCCATAGCGTATGG +
Preference number: 4 (lower is better)
Translates to: QLLEKLREFCVVKMLLPVQFLVV*LVHSVW
Trigger: CCATACGCTATGGACAAGTCACACCACTAGAAATTG...AACCGGAAGAAGCATCTTAACTACACAGAATTCACGCAGTTTCTCCAGGAGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR TCA 90 bp CTGTGCAGGATACTAAGTAACTTGGTCTGTCTCCAGGCTCGCCTCTTGAAAATACAATTTCTAGTGGTGTaGCTTGTCCATAGCGTATGG +
Preference number: 4 (lower is better)
Translates to: LCRILSNLVCLQARLLKIQFLVV*LVHSVW
Trigger: CCATACGCTATGGACAAGTCACACCACTAGAAATTG...TATTTTCAAGAGGCGAGCCTGGAGACAGACCAAGTTACTTAGTATCCTGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR TCA 90 bp GAAGATTTAAACCTCCCACGTGTCCATTTTCATCAGCCAGAAGTAGTTTGCAATCACAGCTCCAGCAACTaGGCCCAGAGTGAATCTGTA +
Preference number: 4 (lower is better)
Translates to: EDLNLPRVHFHQPEVVCNHSSSN*AQSESV
Trigger: TACAGATTCACTCTGGGCTCAGTTGCTGGAGCTGTG...ATTGCAAACTACTTCTGGCTGATGAAAATGGACACGTGGGAGGTTTAAATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR TCA 90 bp AGTGCAAAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCGTGACATTTCTACAAATGTaGTTTGTTGGGATGAGGTGC +
Preference number: 4 (lower is better)
Translates to: SAKACLACSNCSSWRNCVTFLQM*FVGMRC
Trigger: GCACCTCATCCCAACAAATCACATTTGTAGAAATGT...CACGCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTTTGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR GCA 90 bp AGTGCAAAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCGTGCGGTTATGCCCAAAATaGAGTCGGATAAATTCACAA +
Preference number: 4 (lower is better)
Translates to: SAKACLACSNCSSWRNCVRLCPK*SRINSQ
Trigger: TTGTGAATTTATCCGACTGCATTTTGGGCATAACCG...CACGCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTTTGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
CDS-3UTR GCA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCATGCAGCTGGGACACCTaGCATGGCTCCAGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: VLYILRTSSMLFSNELNACSWDT*HGSSCK
Trigger: CTTGCAGCTGGAGCCATGGCAGGTGTCCCAGCTGCA...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR GCA 90 bp TGCAATGAGCATAAACAGGAAAATAGATTGCAGAGAAGGGAATGTCTCGGAGGATTTGTTTTCGATGCCTaGAAACGTGGCTGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: CNEHKQENRLQRRECLGGFVFDA*KRGCGE
Trigger: CTCGCCACAGCCACGTTTGCAGGCATCGAAAACAAA...TCCTCCGAGACATTCCCTTCTCTGCAATCTATTTTCCTGTTTATGCTCATTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR GCA 90 bp AAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCGTGAATTCTCAAATTTGTTTTCGATaGCTGCAAACGTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: KACLACSNCSSWRNCVNSQICFR*LQTWLW
Trigger: CCACAGCCACGTTTGCAGGCATCGAAAACAAATTTG...AGAATTCACGCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR GCA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCAGAGCCTGGAAGGAGCTaGTGTACCAACGGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: VLYILRTSSMLFSNELNAEPGRS*CTNGVA
Trigger: GGCCACACCGTTGGTACAGCAGCTCCTTCCAGGCTC...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426896.5
CDS-3UTR GCA 90 bp ATCAGCACACACAAGTCATTAGCCTGGTCCTCTGGCATCCACTGGCATGCATCTCACTATGTCTCGTTATaGCTTTTATCAGCAAATACC +
Preference number: 4 (lower is better)
Translates to: ISTHKSLAWSSGIHWHASHYVSL*LLSANT
Trigger: GGTATTTGCTGATAAAAGGCATAACGAGACATAGTG...AGATGCATGCCAGTGGATGCCAGAGGACCAGGCTAATGACTTGTGTGTGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CCA 90 bp TATATGTATATGTCATACAGAAAGAAGAGTTTGACTCCTCAGCTCAGTCAGTACGCAGACTCGGCAATCTaGAGCCAGATAGGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: YMYMSYRKKSLTPQLSQYADSAI*SQIGLP
Trigger: AGGCAGGCCTATCTGGCTCCAGATTGCCGAGTCTGC...GTACTGACTGAGCTGAGGAGTCAAACTCTTCTTTCTGTATGACATATACATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR TCA 90 bp AAAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCGTGAATTCATGTTTCTTAACTCATaGGGATCCCCTCGCTTAGTT +
Preference number: 4 (lower is better)
Translates to: KGLSCMFQLQLLEKLREFMFLNS*GSPRLV
Trigger: AACTAAGCGAGGGGATCCTCATGAGTTAAGAAACAT...GAATTCACGCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
CDS-3UTR TCA 90 bp TTGAGTGCAAAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCCAAATTCCTCCTTTGTaGCTTCAACATCTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: LSAKACLACSNCSSWRNCQIPPL*LQHLSL
Trigger: CAAGGAAAGATGTTGAAGTCACAAAGGAGGAATTTG...GCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTTTGCACTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR TCA 90 bp CAAGTGGTAGTAGCAAAACAACTGTATTATTATTTGTTCCACTCCCATGAGACCCAACTGAGCCCAGAGTaGATCTGTAAGCAGACTCGG +
Preference number: 4 (lower is better)
Translates to: QVVVAKQLYYYLFHSHETQLSPE*ICKQTR
Trigger: CCGAGTCTGCTTACAGATTCACTCTGGGCTCAGTTG...GGTCTCATGGGAGTGGAACAAATAATAATACAGTTGTTTTGCTACTACCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR TCA 90 bp TGGAGCAACCCCTATAAGTTGTGGTATCAGACCCCTGTAGAGTCCAAAGAAGCCCATAAGACTAAAGCTTaGAACAGCGTTGTGGTTTTT +
Preference number: 4 (lower is better)
Translates to: WSNPYKLWYQTPVESKEAHKTKA*NSVVVF
Trigger: AAAAACCACAACGCTGTTTCAAGCTTTAGTCTTATG...GGCTTCTTTGGACTCTACAGGGGTCTGATACCACAACTTATAGGGGTTGCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR TCA 90 bp CAAGTGGTAGTAGCAAAACAACTGTATTATTATTTGTTCCACTCCCATGAGACCTTTCCATATGCACACTaGCAGGCGAGGAGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: QVVVAKQLYYYLFHSHETFPYAH*QARSCL
Trigger: TAGGCAGCTCCTCGCCTGTCAGTGTGCATATGGAAA...GGTCTCATGGGAGTGGAACAAATAATAATACAGTTGTTTTGCTACTACCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR GCA 90 bp AAGGTGGAAGAAAGGGCGAACCCGATCATGAGTTATTTGCAATCAGTAGTCAATACTCCTGCCAAGAGCTaGACGATCTTTGGGTTACTA +
Preference number: 4 (lower is better)
Translates to: KVEERANPIMSYLQSVVNTPAKS*TIFGLL
Trigger: TAGTAACCCAAAGATCGTGCAGCTCTTGGCAGGAGT...ATTGACTACTGATTGCAAATAACTCATGATCGGGTTCGCCCTTTCTTCCACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR GCA 90 bp AAGATGCTTCTTCCGGTTATGCCCAAAATGCAGTCGGATAAATTCACAATCCCATTGATCAGCTACTCCTaGCAAGAGCTGCACGATCTT +
Preference number: 4 (lower is better)
Translates to: KMLLPVMPKMQSDKFTIPLISYS*QELHDL
Trigger: AAGATCGTGCAGCTCTTGGCAGGAGTAGCTGATCAA...TGGGATTGTGAATTTATCCGACTGCATTTTGGGCATAACCGGAAGAAGCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
CDS-3UTR GCA 90 bp TTGAGTGCAAAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCCGGTTATGCCCAAAATaGAGTCGGATAAATTCACAA +
Preference number: 4 (lower is better)
Translates to: LSAKACLACSNCSSWRNCRLCPK*SRINSQ
Trigger: TTGTGAATTTATCCGACTGCATTTTGGGCATAACCG...GCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTTTGCACTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
CDS-3UTR GCA 90 bp AAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCGTGAATTCTGCTTTTGTCTTTGAGTaGAAAGGCTTGTCTTGCATG +
Preference number: 4 (lower is better)
Translates to: KACLACSNCSSWRNCVNSAFVFE*KGLSCM
Trigger: CATGCAAGACAAGCCTTTGCACTCAAAGACAAAAGC...AGAATTCACGCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
CDS-3UTR GCA 90 bp CTGTGCAGGATACTAAGTAACTTGGTCTGTCTCCAGGCTCGCCTCTTGAAAATAGCTTTTGTCTTTGAGTaGAAAGGCTTGTCTTGCATG +
Preference number: 4 (lower is better)
Translates to: LCRILSNLVCLQARLLKIAFVFE*KGLSCM
Trigger: CATGCAAGACAAGCCTTTGCACTCAAAGACAAAAGC...TATTTTCAAGAGGCGAGCCTGGAGACAGACCAAGTTACTTAGTATCCTGCACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR GCA 90 bp AATATGTACAATCACTGTAAGTGCAAGCTGTGCAAAGCAGAGTCTAGAACACTAGTCCCTGTTTCCATATaGACACTGACAGGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: NMYNHCKCKLCKAESRTLVPVSI*TLTGEE
Trigger: CTCCTCGCCTGTCAGTGTGCATATGGAAACAGGGAC...TAGTGTTCTAGACTCTGCTTTGCACAGCTTGCACTTACAGTGATTGTACATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CCA 90 bp CAAGTATATGTATATGTCATACAGAAAGAAGAGTTTGACTCCTCAGCTCAGTCACTGGGACACCTGCCATaGCTCCAGCTGCAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: QVYVYVIQKEEFDSSAQSLGHLP*LQLQED
Trigger: ATCTTCTTGCAGCTGGAGCCATGGCAGGTGTCCCAG...TGACTGAGCTGAGGAGTCAAACTCTTCTTTCTGTATGACATATACATATACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR CCA 90 bp CTCCTGGAGAAACTGCGTGAATTCTGTGTAGTTAAGATGCTTCTTCCGGTTATGAGATCAACCCATCCTTaGTTTGATCAGCTACTCCTG +
Preference number: 4 (lower is better)
Translates to: LLEKLREFCVVKMLLPVMRSTHP*FDQLLL
Trigger: CAGGAGTAGCTGATCAAACCAAGGATGGGTTGATCT...CATAACCGGAAGAAGCATCTTAACTACACAGAATTCACGCAGTTTCTCCAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475360.6
CDS-3UTR CCA 90 bp GCAGAGTCTAGAACACTAATTCATGCCAAGGCTTACAAAAACATTTCAACACATAGCAGTGATTACCTCTaGGCCAGGAAGTGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: AESRTLIHAKAYKNISTHSSDYL*ARKWWR
Trigger: CCTCCACCACTTCCTGGCCCAGAGGTAATCACTGCT...ATGTGTTGAAATGTTTTTGTAAGCCTTGGCATGAATTAGTGTTCTAGACTCTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000422440.7
3UTR CAA 72 bp CATGCCACTTTTGCTTTTGTCTTTGAGTGCAAAGGCTaGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAA +
Preference number: 4 (lower is better)
Translates to: HATFAFVFECKG*SCMFQLQLLEK
Trigger: TTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTTTGCACTCAAAGACAAAAGCAAAAGTGGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
3UTR CAA 72 bp ATCAATCGAGGAGCACTGTGCAGGATACTAAGTAACTaGGTCTGTCTCCAGGCTCGCCTCTTGAAAATATTT +
Preference number: 4 (lower is better)
Translates to: INRGALCRILSN*VCLQARLLKIF
Trigger: AAATATTTTCAAGAGGCGAGCCTGGAGACAGACCAAGTTACTTAGTATCCTGCACAGTGCTCCTCGATTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR TCA 90 bp ATTTTTCTGTTTTCTATAAAGGTGGAAGAAAGGGCGAACCCGATCATGAGTTATGAAGCTAACCTGGTGTaGGATACTTCCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: IFLFSIKVEERANPIMSYEANLV*DTSSSC
Trigger: GCAGCTGGAGGAAGTATCTCACACCAGGTTAGCTTC...ATAACTCATGATCGGGTTCGCCCTTTCTTCCACCTTTATAGAAAACAGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR TCA 90 bp AAACAAGTATATGTATATGTCATACAGAAAGAAGAGTTTGACTCCTCAGCTCAGCTTAGGTGTTGGTTCTaGACCAGCGGGTTTGAGGCC +
Preference number: 4 (lower is better)
Translates to: KQVYVYVIQKEEFDSSAQLRCWF*TSGFEA
Trigger: GGCCTCAAACCCGCTGGTTCAGAACCAACACCTAAG...CTGAGCTGAGGAGTCAAACTCTTCTTTCTGTATGACATATACATATACTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR TCA 90 bp AATATGTACAATCACTGTAAGTGCAAGCTGTGCAAAGCAGAGTCTAGAACACTATCAGTACCATGCAGCTaGCTGGATACATTACAGGGC +
Preference number: 4 (lower is better)
Translates to: NMYNHCKCKLCKAESRTLSVPCS*LDTLQG
Trigger: GCCCTGTAATGTATCCAGTCAGCTGCATGGTACTGA...TAGTGTTCTAGACTCTGCTTTGCACAGCTTGCACTTACAGTGATTGTACATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR TCA 90 bp AATGGTAACCATGATGTCACTGAAATCCAGACCAGAAATCATGCCACTTTTGCTTGTGATTTGTTGGGATaGGGTGCCAAGATGTCTCTG +
Preference number: 4 (lower is better)
Translates to: NGNHDVTEIQTRNHATFACDLLG*GAKMSL
Trigger: CAGAGACATCTTGGCACCTCATCCCAACAAATCACA...AGCAAAAGTGGCATGATTTCTGGTCTGGATTTCAGTGACATCATGGTTACCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR TCA 90 bp GGTAAGCGGGACACTTTCCCATCTCACTCTAGATACATACATAGGATTCTTTTGCACGCCCTTGATGAGTaGCTTTTAGAACAGTTTGCA +
Preference number: 4 (lower is better)
Translates to: GKRDTFPSHSRYIHRILLHALDE*LLEQFA
Trigger: TGCAAACTGTTCTAAAAGTCACTCATCAAGGGCGTG...CAAAAGAATCCTATGTATGTATCTAGAGTGAGATGGGAAAGTGTCCCGCTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR GCA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCACCTCGCTTAGTTGTCTaGACCTTGACCGCCATGCTG +
Preference number: 4 (lower is better)
Translates to: VLYILRTSSMLFSNELNAPRLVV*TLTAML
Trigger: CAGCATGGCGGTCAAGGTGCAGACAACTAAGCGAGG...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000426896.5
CDS-3UTR GCA 90 bp CTGTGCAGGATACTAAGTAACTTGGTCTGTCTCCAGGCTCGCCTCTTGAAAATAGAGCTGCCTAGGAAATaGTTTTTGATTGATGAACAG +
Preference number: 4 (lower is better)
Translates to: LCRILSNLVCLQARLLKIELPRK*FLIDEQ
Trigger: CTGTTCATCAATCAAAAAGCATTTCCTAGGCAGCTC...TATTTTCAAGAGGCGAGCCTGGAGACAGACCAAGTTACTTAGTATCCTGCACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CCA 90 bp CAAATCACATCCATATCAAAGTGTAGATGTGGCTGTCAAGATCTATGTTTAGATGAGCCAGAGCCACGCTaGTTTTGCATTCGGGTCTTC +
Preference number: 4 (lower is better)
Translates to: QITSISKCRCGCQDLCLDEPEPR*FCIRVF
Trigger: GAAGACCCGAATGCAAAACCAGCGTGGCTCTGGCTC...ATCTAAACATAGATCTTGACAGCCACATCTACACTTTGATATGGATGTGATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CCA 90 bp CAGCTCCTGGAGAAACTGCGTGAATTCTGTGTAGTTAAGATGCTTCTTCCGGTTTTTAATGGCCTTTTCTaGAGCAACCCCTATAAGTTG +
Preference number: 4 (lower is better)
Translates to: QLLEKLREFCVVKMLLPVFNGLF*SNPYKL
Trigger: CAACTTATAGGGGTTGCTCCAGAAAAGGCCATTAAA...AACCGGAAGAAGCATCTTAACTACACAGAATTCACGCAGTTTCTCCAGGAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CCA 90 bp AAGATGCTTCTTCCGGTTATGCCCAAAATGCAGTCGGATAAATTCACAATCCCAAACTTCTGCTGGAAGTaGAACAGAGCCATCTCTTCT +
Preference number: 4 (lower is better)
Translates to: KMLLPVMPKMQSDKFTIPNFCWK*NRAISS
Trigger: AGAAGAGATGGCTCTGTTCCACTTCCAGCAGAAGTT...TGGGATTGTGAATTTATCCGACTGCATTTTGGGCATAACCGGAAGAAGCATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CCA 90 bp CAAATCACATCCATATCAAAGTGTAGATGTGGCTGTCAAGATCTATGTTTAGATCTGCAAACGTGGCTGTaGCGAGTCTGTATCCACCGA +
Preference number: 4 (lower is better)
Translates to: QITSISKCRCGCQDLCLDLQTWL*RVCIHR
Trigger: TCGGTGGATACAGACTCGCCACAGCCACGTTTGCAG...ATCTAAACATAGATCTTGACAGCCACATCTACACTTTGATATGGATGTGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CCA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCATTCTCTGACCGGGGCTaGCACTCTTCTCCAAGACTG +
Preference number: 4 (lower is better)
Translates to: VLYILRTSSMLFSNELNAFSDRG*HSSPRL
Trigger: CAGTCTTGGAGAAGAGTGCCAGCCCCGGTCAGAGAA...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426896.5
3UTR CAA 72 bp CTGAAATCCAGACCAGAAATCATGCCACTTTTGCTTTaGTCTTTGAGTGCAAAGGCTTGTCTTGCATGTTCC +
Preference number: 4 (lower is better)
Translates to: LKSRPEIMPLLL*SLSAKACLACS
Trigger: GGAACATGCAAGACAAGCCTTTGCACTCAAAGACAAAAGCAAAAGTGGCATGATTTCTGGTCTGGATTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
CDS-3UTR TCA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCAGAAGCTAACCTGGTGTaGGATACTTCCTCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: VLYILRTSSMLFSNELNAEANLV*DTSSSC
Trigger: GCAGCTGGAGGAAGTATCTCACACCAGGTTAGCTTC...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000426896.5
CDS-3UTR TCA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCAACCATGCCTGTTCCATaGATGAGCCTGGAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: VLYILRTSSMLFSNELNATMPVP*MSLEGA
Trigger: AGCTCCTTCCAGGCTCATTCATGGAACAGGCATGGT...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426896.5
CDS-3UTR GCA 90 bp GGTAACCATGATGTCACTGAAATCCAGACCAGAAATCATGCCACTTTTGCTTTTTGCTTCTTCCGGTTATaGCCAAAATGCAGTCGGATA +
Preference number: 4 (lower is better)
Translates to: GNHDVTEIQTRNHATFAFCFFRL*PKCSRI
Trigger: TATCCGACTGCATTTTGGGCATAACCGGAAGAAGCA...AAAAGCAAAAGTGGCATGATTTCTGGTCTGGATTTCAGTGACATCATGGTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
CDS-3UTR GCA 90 bp AATGGTAACCATGATGTCACTGAAATCCAGACCAGAAATCATGCCACTTTTGCTTGCAAAGGCTTGTCTTaGATGTTCCAATTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: NGNHDVTEIQTRNHATFACKGLS*MFQLQL
Trigger: GAGCTGCAATTGGAACATGCAAGACAAGCCTTTGCA...AGCAAAAGTGGCATGATTTCTGGTCTGGATTTCAGTGACATCATGGTTACCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
CDS-3UTR GCA 90 bp CAGCTCCTGGAGAAACTGCGTGAATTCTGTGTAGTTAAGATGCTTCTTCCGGTTTTGTGCCAGCTAGAGTaGTATATATCTTACGAACAA +
Preference number: 4 (lower is better)
Translates to: QLLEKLREFCVVKMLLPVLCQLE*YISYEQ
Trigger: TTGTTCGTAAGATATATAGCACTCTAGCTGGCACAA...AACCGGAAGAAGCATCTTAACTACACAGAATTCACGCAGTTTCTCCAGGAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR GCA 90 bp CAAGTATATGTATATGTCATACAGAAAGAAGAGTTTGACTCCTCAGCTCAGTCATCCAGCAAGAACTTCTaGTGGAAGTGGAACAGAGCC +
Preference number: 4 (lower is better)
Translates to: QVYVYVIQKEEFDSSAQSSSKNF*WKWNRA
Trigger: GGCTCTGTTCCACTTCCAGCAGAAGTTCTTGCTGGA...TGACTGAGCTGAGGAGTCAAACTCTTCTTTCTGTATGACATATACATATACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR GCA 90 bp GCAGAGTCTAGAACACTAATTCATGCCAAGGCTTACAAAAACATTTCAACACATTTTGTTTTCGATGCCTaGAAACGTGGCTGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: AESRTLIHAKAYKNISTHFVFDA*KRGCGE
Trigger: CTCGCCACAGCCACGTTTGCAGGCATCGAAAACAAA...ATGTGTTGAAATGTTTTTGTAAGCCTTGGCATGAATTAGTGTTCTAGACTCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR GCA 90 bp AATGGTAACCATGATGTCACTGAAATCCAGACCAGAAATCATGCCACTTTTGCTTTCAAGGCGCCATTTTaGCACACTCAACAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: NGNHDVTEIQTRNHATFAFKAPF*HTQQLS
Trigger: AGACAACTGTTGAGTGTGGCAAAATGGCGCCTTGAA...AGCAAAAGTGGCATGATTTCTGGTCTGGATTTCAGTGACATCATGGTTACCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR GCA 90 bp TGCAATGAGCATAAACAGGAAAATAGATTGCAGAGAAGGGAATGTCTCGGAGGATACAATCACTGTAAGTaGAAGCTGTGCAAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: CNEHKQENRLQRRECLGGYNHCK*KLCKAE
Trigger: CTCTGCTTTGCACAGCTTGCACTTACAGTGATTGTA...TCCTCCGAGACATTCCCTTCTCTGCAATCTATTTTCCTGTTTATGCTCATTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CCA 90 bp GAAGATTTAAACCTCCCACGTGTCCATTTTCATCAGCCAGAAGTAGTTTGCAATCTGAACAAAGTCTTCTaGGGTCATATAACGCTCTCC +
Preference number: 4 (lower is better)
Translates to: EDLNLPRVHFHQPEVVCNLNKVF*GHITLS
Trigger: GGAGAGCGTTATATGACCCCAGAAGACTTTGTTCAG...ATTGCAAACTACTTCTGGCTGATGAAAATGGACACGTGGGAGGTTTAAATCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CCA 90 bp CAAAACATTCTGTACATTTCAAGCCACTCAGAACCGCATTACATTTCTACAAATCGATGTGATCAGGGTTaGCAGGAGGAAGGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: QNILYISSHSEPHYISTNRCDQG*QEEGLQ
Trigger: TTGCAGACCTTCCTCCTGCCAACCCTGATCACATCG...ATTTGTAGAAATGTAATGCGGTTCTGAGTGGCTTGAAATGTACAGAATGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR CCA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCATGCCACTGCTGCCTTTaGCTGAACCACAGCAACACT +
Preference number: 4 (lower is better)
Translates to: VLYILRTSSMLFSNELNACHCCL*LNHSNT
Trigger: AGTGTTGCTGTGGTTCAGCCAAAGGCAGCAGTGGCA...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CCA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCAGCTGTACCAACGGTGTaGCCAGAGAACTCCTCCAAA +
Preference number: 4 (lower is better)
Translates to: VLYILRTSSMLFSNELNAAVPTV*PENSSK
Trigger: TTTGGAGGAGTTCTCTGGCCACACCGTTGGTACAGC...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426896.5
CDS-3UTR TCA 90 bp ATGTACAATCACTGTAAGTGCAAGCTGTGCAAAGCAGAGTCTAGAACACTAATTACAGAAAGAAGAGTTTaGCTCCTCAGCTCAGTCAGT +
Preference number: 4 (lower is better)
Translates to: MYNHCKCKLCKAESRTLITERRV*LLSSVS
Trigger: ACTGACTGAGCTGAGGAGTCAAACTCTTCTTTCTGT...AATTAGTGTTCTAGACTCTGCTTTGCACAGCTTGCACTTACAGTGATTGTACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR TCA 90 bp CAAGTATATGTATATGTCATACAGAAAGAAGAGTTTGACTCCTCAGCTCAGTCATGTGATTTGTTGGGATaGGGTGCCAAGATGTCTCTG +
Preference number: 4 (lower is better)
Translates to: QVYVYVIQKEEFDSSAQSCDLLG*GAKMSL
Trigger: CAGAGACATCTTGGCACCTCATCCCAACAAATCACA...TGACTGAGCTGAGGAGTCAAACTCTTCTTTCTGTATGACATATACATATACTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR TCA 90 bp AAGGTGGAAGAAAGGGCGAACCCGATCATGAGTTATTTGCAATCAGTAGTCAATACATTTCTACAAATGTaGTTTGTTGGGATGAGGTGC +
Preference number: 4 (lower is better)
Translates to: KVEERANPIMSYLQSVVNTFLQM*FVGMRC
Trigger: GCACCTCATCCCAACAAATCACATTTGTAGAAATGT...ATTGACTACTGATTGCAAATAACTCATGATCGGGTTCGCCCTTTCTTCCACCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR TCA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCAAACCCATCCTTGGTTTaGTCAGCTACTCCTGCCAAG +
Preference number: 4 (lower is better)
Translates to: VLYILRTSSMLFSNELNANPSLV*SATPAK
Trigger: CTTGGCAGGAGTAGCTGATCAAACCAAGGATGGGTT...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426896.5
CDS-3UTR GCA 90 bp GCAGAGTCTAGAACACTAATTCATGCCAAGGCTTACAAAAACATTTCAACACATACTCCTGCCAAGAGCTaGACGATCTTTGGGTTACTA +
Preference number: 4 (lower is better)
Translates to: AESRTLIHAKAYKNISTHTPAKS*TIFGLL
Trigger: TAGTAACCCAAAGATCGTGCAGCTCTTGGCAGGAGT...ATGTGTTGAAATGTTTTTGTAAGCCTTGGCATGAATTAGTGTTCTAGACTCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR GCA 90 bp GCAGAGTCTAGAACACTAATTCATGCCAAGGCTTACAAAAACATTTCAACACATTTGATCAGCTACTCCTaGCAAGAGCTGCACGATCTT +
Preference number: 4 (lower is better)
Translates to: AESRTLIHAKAYKNISTHLISYS*QELHDL
Trigger: AAGATCGTGCAGCTCTTGGCAGGAGTAGCTGATCAA...ATGTGTTGAAATGTTTTTGTAAGCCTTGGCATGAATTAGTGTTCTAGACTCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR GCA 90 bp GGTAAGCGGGACACTTTCCCATCTCACTCTAGATACATACATAGGATTCTTTTGCGGTTATGCCCAAAATaGAGTCGGATAAATTCACAA +
Preference number: 4 (lower is better)
Translates to: GKRDTFPSHSRYIHRILLRLCPK*SRINSQ
Trigger: TTGTGAATTTATCCGACTGCATTTTGGGCATAACCG...CAAAAGAATCCTATGTATGTATCTAGAGTGAGATGGGAAAGTGTCCCGCTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR GCA 90 bp AATGGTAACCATGATGTCACTGAAATCCAGACCAGAAATCATGCCACTTTTGCTGCTTTTGTCTTTGAGTaGAAAGGCTTGTCTTGCATG +
Preference number: 4 (lower is better)
Translates to: NGNHDVTEIQTRNHATFAAFVFE*KGLSCM
Trigger: CATGCAAGACAAGCCTTTGCACTCAAAGACAAAAGC...AGCAAAAGTGGCATGATTTCTGGTCTGGATTTCAGTGACATCATGGTTACCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
CDS-3UTR GCA 90 bp ATCAATGTAAAACCACCGCTGGAGAAGTTCATAAGTGACCAAGGTAACACCAAAATCTCTCCAGCTACTTaGAGACGAATCTTCACTATC +
Preference number: 4 (lower is better)
Translates to: INVKPPLEKFISDQGNTKISPAT*RRIFTI
Trigger: GATAGTGAAGATTCGTCTGCAAGTAGCTGGAGAGAT...TTTGGTGTTACCTTGGTCACTTATGAACTTCTCCAGCGGTGGTTTTACATTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR GCA 90 bp GGTAAGCGGGACACTTTCCCATCTCACTCTAGATACATACATAGGATTCTTTTGCAGCCAGAAGTAGTTTaGAATGAGCATAAACAGGAA +
Preference number: 4 (lower is better)
Translates to: GKRDTFPSHSRYIHRILLQPEVV*NEHKQE
Trigger: TTCCTGTTTATGCTCATTGCAAACTACTTCTGGCTG...CAAAAGAATCCTATGTATGTATCTAGAGTGAGATGGGAAAGTGTCCCGCTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR GCA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCAACTCTTCTCCAAGACTaGCACCATGCCTGTTCCATG +
Preference number: 4 (lower is better)
Translates to: VLYILRTSSMLFSNELNATLLQD*HHACSM
Trigger: CATGGAACAGGCATGGTGGCAGTCTTGGAGAAGAGT...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426896.5
CDS-3UTR CCA 90 bp CTCCTGGAGAAACTGCGTGAATTCTGTGTAGTTAAGATGCTTCTTCCGGTTATGCATCAACCTCAGTACTaGCATACTGTAGAAATATGT +
Preference number: 4 (lower is better)
Translates to: LLEKLREFCVVKMLLPVMHQPQY*HTVEIC
Trigger: ACATATTTCTACAGTATGCCAGTACTGAGGTTGATG...CATAACCGGAAGAAGCATCTTAACTACACAGAATTCACGCAGTTTCTCCAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
CDS-3UTR CCA 90 bp GGTAAGCGGGACACTTTCCCATCTCACTCTAGATACATACATAGGATTCTTTTGTTTAATGGCCTTTTCTaGAGCAACCCCTATAAGTTG +
Preference number: 4 (lower is better)
Translates to: GKRDTFPSHSRYIHRILLFNGLF*SNPYKL
Trigger: CAACTTATAGGGGTTGCTCCAGAAAAGGCCATTAAA...CAAAAGAATCCTATGTATGTATCTAGAGTGAGATGGGAAAGTGTCCCGCTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CCA 90 bp GCAGAGTCTAGAACACTAATTCATGCCAAGGCTTACAAAAACATTTCAACACATGGAGGAAACACGCTTTaGCACCCTTATACAGACCAA +
Preference number: 4 (lower is better)
Translates to: AESRTLIHAKAYKNISTHGGNTL*HPYTDQ
Trigger: TTGGTCTGTATAAGGGTGCCAAAGCGTGTTTCCTCC...ATGTGTTGAAATGTTTTTGTAAGCCTTGGCATGAATTAGTGTTCTAGACTCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR TCA 90 bp CAAGTGGTAGTAGCAAAACAACTGTATTATTATTTGTTCCACTCCCATGAGACCATGTTTCTTAACTCATaGGGATCCCCTCGCTTAGTT +
Preference number: 4 (lower is better)
Translates to: QVVVAKQLYYYLFHSHETMFLNS*GSPRLV
Trigger: AACTAAGCGAGGGGATCCTCATGAGTTAAGAAACAT...GGTCTCATGGGAGTGGAACAAATAATAATACAGTTGTTTTGCTACTACCACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR TCA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCAACTGGAAAGCCACTATaGACATGGAATCTGGAGCAC +
Preference number: 4 (lower is better)
Translates to: VLYILRTSSMLFSNELNATGKPL*TWNLEH
Trigger: GTGCTCCAGATTCCATGTTCATAGTGGCTTTCCAGT...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426896.5
CDS-3UTR GCA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCAACTCCTGCCAAGAGCTaGACGATCTTTGGGTTACTA +
Preference number: 4 (lower is better)
Translates to: VLYILRTSSMLFSNELNATPAKS*TIFGLL
Trigger: TAGTAACCCAAAGATCGTGCAGCTCTTGGCAGGAGT...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000426896.5
CDS-3UTR GCA 90 bp CAAATCACATCCATATCAAAGTGTAGATGTGGCTGTCAAGATCTATGTTTAGATTTGATCAGCTACTCCTaGCAAGAGCTGCACGATCTT +
Preference number: 4 (lower is better)
Translates to: QITSISKCRCGCQDLCLDLISYS*QELHDL
Trigger: AAGATCGTGCAGCTCTTGGCAGGAGTAGCTGATCAA...ATCTAAACATAGATCTTGACAGCCACATCTACACTTTGATATGGATGTGATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR GCA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCATTGATCAGCTACTCCTaGCAAGAGCTGCACGATCTT +
Preference number: 4 (lower is better)
Translates to: VLYILRTSSMLFSNELNALISYS*QELHDL
Trigger: AAGATCGTGCAGCTCTTGGCAGGAGTAGCTGATCAA...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000426896.5
CDS-3UTR GCA 90 bp TATATGTATATGTCATACAGAAAGAAGAGTTTGACTCCTCAGCTCAGTCAGTACTGCTTCTTCCGGTTATaGCCAAAATGCAGTCGGATA +
Preference number: 4 (lower is better)
Translates to: YMYMSYRKKSLTPQLSQYCFFRL*PKCSRI
Trigger: TATCCGACTGCATTTTGGGCATAACCGGAAGAAGCA...GTACTGACTGAGCTGAGGAGTCAAACTCTTCTTTCTGTATGACATATACATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR GCA 90 bp AAACAAGTATATGTATATGTCATACAGAAAGAAGAGTTTGACTCCTCAGCTCAGCTTGCATGTTCCAATTaGAGCTCCTGGAGAAACTGC +
Preference number: 4 (lower is better)
Translates to: KQVYVYVIQKEEFDSSAQLACSN*SSWRNC
Trigger: GCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAG...CTGAGCTGAGGAGTCAAACTCTTCTTTCTGTATGACATATACATATACTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR GCA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCACTTGCATGTTCCAATTaGAGCTCCTGGAGAAACTGC +
Preference number: 4 (lower is better)
Translates to: VLYILRTSSMLFSNELNALACSN*SSWRNC
Trigger: GCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAG...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000426896.5
CDS-3UTR GCA 90 bp CAAGTATATGTATATGTCATACAGAAAGAAGAGTTTGACTCCTCAGCTCAGTCATGCAAAGGCTTGTCTTaGATGTTCCAATTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: QVYVYVIQKEEFDSSAQSCKGLS*MFQLQL
Trigger: GAGCTGCAATTGGAACATGCAAGACAAGCCTTTGCA...TGACTGAGCTGAGGAGTCAAACTCTTCTTTCTGTATGACATATACATATACTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR GCA 90 bp TATATGTATATGTCATACAGAAAGAAGAGTTTGACTCCTCAGCTCAGTCAGTACCAAATTTGTTTTCGATaGCTGCAAACGTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: YMYMSYRKKSLTPQLSQYQICFR*LQTWLW
Trigger: CCACAGCCACGTTTGCAGGCATCGAAAACAAATTTG...GTACTGACTGAGCTGAGGAGTCAAACTCTTCTTTCTGTATGACATATACATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR GCA 90 bp CAAGTATATGTATATGTCATACAGAAAGAAGAGTTTGACTCCTCAGCTCAGTCATTCAAGGCGCCATTTTaGCACACTCAACAGTTGTCT +
Preference number: 4 (lower is better)
Translates to: QVYVYVIQKEEFDSSAQSFKAPF*HTQQLS
Trigger: AGACAACTGTTGAGTGTGGCAAAATGGCGCCTTGAA...TGACTGAGCTGAGGAGTCAAACTCTTCTTTCTGTATGACATATACATATACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR GCA 90 bp ATTTTTCTGTTTTCTATAAAGGTGGAAGAAAGGGCGAACCCGATCATGAGTTATTGGCATCCACTGGCATaGATCTTTCCAAAGTATCAC +
Preference number: 4 (lower is better)
Translates to: IFLFSIKVEERANPIMSYWHPLA*IFPKYH
Trigger: GTGATACTTTGGAAAGATGCATGCCAGTGGATGCCA...ATAACTCATGATCGGGTTCGCCCTTTCTTCCACCTTTATAGAAAACAGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR GCA 90 bp ATGTACAATCACTGTAAGTGCAAGCTGTGCAAAGCAGAGTCTAGAACACTAATTAATCGAGGAGCACTGTaGAGGATACTAAGTAACTTG +
Preference number: 4 (lower is better)
Translates to: MYNHCKCKLCKAESRTLINRGAL*RILSNL
Trigger: CAAGTTACTTAGTATCCTGCACAGTGCTCCTCGATT...AATTAGTGTTCTAGACTCTGCTTTGCACAGCTTGCACTTACAGTGATTGTACAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CCA 90 bp AAACAAGTATATGTATATGTCATACAGAAAGAAGAGTTTGACTCCTCAGCTCAGCTTGTCCATAGCGTATaGCACTCTGGGCAAATTCCT +
Preference number: 4 (lower is better)
Translates to: KQVYVYVIQKEEFDSSAQLVHSV*HSGQIP
Trigger: AGGAATTTGCCCAGAGTGCCATACGCTATGGACAAG...CTGAGCTGAGGAGTCAAACTCTTCTTTCTGTATGACATATACATATACTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR CCA 90 bp AAACAAGTATATGTATATGTCATACAGAAAGAAGAGTTTGACTCCTCAGCTCAGTACCATGCAGCTGACTaGATACATTACAGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: KQVYVYVIQKEEFDSSAQYHAAD*IHYRAA
Trigger: AGCAGCCCTGTAATGTATCCAGTCAGCTGCATGGTA...CTGAGCTGAGGAGTCAAACTCTTCTTTCTGTATGACATATACATATACTTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR CCA 90 bp ATTTTTCTGTTTTCTATAAAGGTGGAAGAAAGGGCGAACCCGATCATGAGTTATAGATCAACCCATCCTTaGTTTGATCAGCTACTCCTG +
Preference number: 4 (lower is better)
Translates to: IFLFSIKVEERANPIMSYRSTHP*FDQLLL
Trigger: CAGGAGTAGCTGATCAAACCAAGGATGGGTTGATCT...ATAACTCATGATCGGGTTCGCCCTTTCTTCCACCTTTATAGAAAACAGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR GCA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCATGCTTCTTCCGGTTATaGCCAAAATGCAGTCGGATA +
Preference number: 4 (lower is better)
Translates to: VLYILRTSSMLFSNELNACFFRL*PKCSRI
Trigger: TATCCGACTGCATTTTGGGCATAACCGGAAGAAGCA...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000426896.5
CDS-3UTR GCA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCATGCAAAGGCTTGTCTTaGATGTTCCAATTGCAGCTC +
Preference number: 4 (lower is better)
Translates to: VLYILRTSSMLFSNELNACKGLS*MFQLQL
Trigger: GAGCTGCAATTGGAACATGCAAGACAAGCCTTTGCA...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000426896.5
CDS-3UTR GCA 90 bp GCAGAGTCTAGAACACTAATTCATGCCAAGGCTTACAAAAACATTTCAACACATATCTCTCCAGCTACTTaGAGACGAATCTTCACTATC +
Preference number: 4 (lower is better)
Translates to: AESRTLIHAKAYKNISTHISPAT*RRIFTI
Trigger: GATAGTGAAGATTCGTCTGCAAGTAGCTGGAGAGAT...ATGTGTTGAAATGTTTTTGTAAGCCTTGGCATGAATTAGTGTTCTAGACTCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR CCA 90 bp CAAAACATTCTGTACATTTCAAGCCACTCAGAACCGCATTACATTTCTACAAATTCCAATTGCAGCTCCTaGAGAAACTGCGTGAATTCT +
Preference number: 4 (lower is better)
Translates to: QNILYISSHSEPHYISTNSNCSS*RNCVNS
Trigger: AGAATTCACGCAGTTTCTCCAGGAGCTGCAATTGGA...ATTTGTAGAAATGTAATGCGGTTCTGAGTGGCTTGAAATGTACAGAATGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR CCA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCATCCAATTGCAGCTCCTaGAGAAACTGCGTGAATTCT +
Preference number: 4 (lower is better)
Translates to: VLYILRTSSMLFSNELNASNCSS*RNCVNS
Trigger: AGAATTCACGCAGTTTCTCCAGGAGCTGCAATTGGA...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000426896.5
CDS-3UTR CCA 90 bp ATGTACAATCACTGTAAGTGCAAGCTGTGCAAAGCAGAGTCTAGAACACTAATTCTTCACTATCTCCAATaGGTTGGTAAAAATGACCTG +
Preference number: 4 (lower is better)
Translates to: MYNHCKCKLCKAESRTLILHYLQ*VGKNDL
Trigger: CAGGTCATTTTTACCAACCCATTGGAGATAGTGAAG...AATTAGTGTTCTAGACTCTGCTTTGCACAGCTTGCACTTACAGTGATTGTACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR CCA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCAAGATCAACCCATCCTTaGTTTGATCAGCTACTCCTG +
Preference number: 4 (lower is better)
Translates to: VLYILRTSSMLFSNELNARSTHP*FDQLLL
Trigger: CAGGAGTAGCTGATCAAACCAAGGATGGGTTGATCT...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426896.5
CDS-3UTR TCA 90 bp AAACAAGTATATGTATATGTCATACAGAAAGAAGAGTTTGACTCCTCAGCTCAGATGTTTCTTAACTCATaGGGATCCCCTCGCTTAGTT +
Preference number: 4 (lower is better)
Translates to: KQVYVYVIQKEEFDSSAQMFLNS*GSPRLV
Trigger: AACTAAGCGAGGGGATCCTCATGAGTTAAGAAACAT...CTGAGCTGAGGAGTCAAACTCTTCTTTCTGTATGACATATACATATACTTGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR TCA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCAATGTTTCTTAACTCATaGGGATCCCCTCGCTTAGTT +
Preference number: 4 (lower is better)
Translates to: VLYILRTSSMLFSNELNAMFLNS*GSPRLV
Trigger: AACTAAGCGAGGGGATCCTCATGAGTTAAGAAACAT...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000426896.5
CDS-3UTR TCA 90 bp TATATGTATATGTCATACAGAAAGAAGAGTTTGACTCCTCAGCTCAGTCAGTACCAAATTCCTCCTTTGTaGCTTCAACATCTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: YMYMSYRKKSLTPQLSQYQIPPL*LQHLSL
Trigger: CAAGGAAAGATGTTGAAGTCACAAAGGAGGAATTTG...GTACTGACTGAGCTGAGGAGTCAAACTCTTCTTTCTGTATGACATATACATATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR TCA 90 bp ATTTTTCTGTTTTCTATAAAGGTGGAAGAAAGGGCGAACCCGATCATGAGTTATTATCCTTTACTCTTTTaGAAGCTTGGCCTTTGCCTT +
Preference number: 4 (lower is better)
Translates to: IFLFSIKVEERANPIMSYYPLLF*KLGLCL
Trigger: AAGGCAAAGGCCAAGCTTTCAAAAGAGTAAAGGATA...ATAACTCATGATCGGGTTCGCCCTTTCTTCCACCTTTATAGAAAACAGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR GCA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCAGCTTTTGTCTTTGAGTaGAAAGGCTTGTCTTGCATG +
Preference number: 4 (lower is better)
Translates to: VLYILRTSSMLFSNELNAAFVFE*KGLSCM
Trigger: CATGCAAGACAAGCCTTTGCACTCAAAGACAAAAGC...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000426896.5
CDS-3UTR GCA 90 bp CAAATCACATCCATATCAAAGTGTAGATGTGGCTGTCAAGATCTATGTTTAGATTACAATCACTGTAAGTaGAAGCTGTGCAAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: QITSISKCRCGCQDLCLDYNHCK*KLCKAE
Trigger: CTCTGCTTTGCACAGCTTGCACTTACAGTGATTGTA...ATCTAAACATAGATCTTGACAGCCACATCTACACTTTGATATGGATGTGATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR TCA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCACAAATTCCTCCTTTGTaGCTTCAACATCTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: VLYILRTSSMLFSNELNAQIPPL*LQHLSL
Trigger: CAAGGAAAGATGTTGAAGTCACAAAGGAGGAATTTG...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000426896.5
CDS-3UTR GCA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCACGGTTATGCCCAAAATaGAGTCGGATAAATTCACAA +
Preference number: 4 (lower is better)
Translates to: VLYILRTSSMLFSNELNARLCPK*SRINSQ
Trigger: TTGTGAATTTATCCGACTGCATTTTGGGCATAACCG...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000426896.5
CDS-3UTR CCA 90 bp TATATGTATATGTCATACAGAAAGAAGAGTTTGACTCCTCAGCTCAGTCAGTACCATCAACCTCAGTACTaGCATACTGTAGAAATATGT +
Preference number: 4 (lower is better)
Translates to: YMYMSYRKKSLTPQLSQYHQPQY*HTVEIC
Trigger: ACATATTTCTACAGTATGCCAGTACTGAGGTTGATG...GTACTGACTGAGCTGAGGAGTCAAACTCTTCTTTCTGTATGACATATACATATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR TCA 90 bp CAAATCACATCCATATCAAAGTGTAGATGTGGCTGTCAAGATCTATGTTTAGATTTTGTTCCACTCCCATaGGACCAATCTAATACATTT +
Preference number: 4 (lower is better)
Translates to: QITSISKCRCGCQDLCLDFVPLP*DQSNTF
Trigger: AAATGTATTAGATTGGTCTCATGGGAGTGGAACAAA...ATCTAAACATAGATCTTGACAGCCACATCTACACTTTGATATGGATGTGATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR GCA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCATTGTGCCAGCTAGAGTaGTATATATCTTACGAACAA +
Preference number: 4 (lower is better)
Translates to: VLYILRTSSMLFSNELNALCQLE*YISYEQ
Trigger: TTGTTCGTAAGATATATAGCACTCTAGCTGGCACAA...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000426896.5
CDS-3UTR CCA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCACATCAACCTCAGTACTaGCATACTGTAGAAATATGT +
Preference number: 4 (lower is better)
Translates to: VLYILRTSSMLFSNELNAHQPQY*HTVEIC
Trigger: ACATATTTCTACAGTATGCCAGTACTGAGGTTGATG...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000426896.5
CDS CCA 90 bp TCAGAGCGAGCGCGCGAGCCGCGGCTGGAGCCCGCCTCTCGCGGCTaGAGAGGACTCAGCCGGCCGCGGGTTCTGCTGCTTGCCCGGGTG +
Preference number: 5 (lower is better)
Translates to: SERAREPRLEPASRG*RGLSRPRVLLLARV
Trigger: CACCCGGGCAAGCAGCAGAACCCGCGGCCGGCTGAGTCCTCTCCAGCCGCGAGAGGCGGGCTCCAGCCGCGGCTCGCGCGCTCGCTCTGA
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464063.1
ENST00000472748.5
CDS GCA 90 bp GCTGGAGAGGACTCAGCCGGCCGCGGGTTCTGCTGCTTGCCCGGGTaGCCTAGCCGCTTCCCAGCCAGGGCTCCCGCAGTCAGCCCCGCG +
Preference number: 5 (lower is better)
Translates to: AGEDSAGRGFCCLPG*PSRFPARAPAVSPA
Trigger: CGCGGGGCTGACTGCGGGAGCCCTGGCTGGGAAGCGGCTAGGGCACCCGGGCAAGCAGCAGAACCCGCGGCCGGCTGAGTCCTCTCCAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000464063.1
ENST00000472748.5
CDS GCA 90 bp CCGCCTCTCGCGGCTGGAGAGGACTCAGCCGGCCGCGGGTTCTGCTaGTTGCCCGGGTGCCCTAGCCGCTTCCCAGCCAGGGCTCCCGCA +
Preference number: 5 (lower is better)
Translates to: PPLAAGEDSAGRGFC*LPGCPSRFPARAPA
Trigger: TGCGGGAGCCCTGGCTGGGAAGCGGCTAGGGCACCCGGGCAAGCAGCAGAACCCGCGGCCGGCTGAGTCCTCTCCAGCCGCGAGAGGCGG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464063.1
ENST00000472748.5
CDS GCA 90 bp AGCCCGCCTCTCGCGGCTGGAGAGGACTCAGCCGGCCGCGGGTTCTaGTGCTTGCCCGGGTGCCCTAGCCGCTTCCCAGCCAGGGCTCCC +
Preference number: 5 (lower is better)
Translates to: SPPLAAGEDSAGRGF*CLPGCPSRFPARAP
Trigger: GGGAGCCCTGGCTGGGAAGCGGCTAGGGCACCCGGGCAAGCAGCAGAACCCGCGGCCGGCTGAGTCCTCTCCAGCCGCGAGAGGCGGGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464063.1
ENST00000472748.5
CDS GCA 90 bp CTCTCGCGGCTGGAGAGGACTCAGCCGGCCGCGGGTTCTGCTGCTTaGCCGGGTGCCCTAGCCGCTTCCCAGCCAGGGCTCCCGCAGTCA +
Preference number: 5 (lower is better)
Translates to: LSRLERTQPAAGSAA*PGALAASQPGLPQS
Trigger: TGACTGCGGGAGCCCTGGCTGGGAAGCGGCTAGGGCACCCGGGCAAGCAGCAGAACCCGCGGCCGGCTGAGTCCTCTCCAGCCGCGAGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464063.1
ENST00000472748.5
CDS GCA 90 bp CAAGACTGCCACCATGCCTGTTCCATGAATGAGCCTGGAAGGAGCTaGTGTACCAACGGTGTGGCCAGAGAACTCCTCCTTTACCCCAGA +
Preference number: 5 (lower is better)
Translates to: QDCHHACSMNEPGRS*CTNGVARELLLYPR
Trigger: TCTGGGGTAAAGGAGGAGTTCTCTGGCCACACCGTTGGTACAGCAGCTCCTTCCAGGCTCATTCATGGAACAGGCATGGTGGCAGTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475360.6
CDS-3UTR CAA 90 bp ATCAGCACACACAAGTCATTAGCCTGGTCCTCTGGCATCCACTGGCATGCATCTCCAGGGAGCCTACAGTaGCAGTCACAGGGCTGTCAG +
Preference number: 5 (lower is better)
Translates to: ISTHKSLAWSSGIHWHASPGSLQ*QSQGCQ
Trigger: CTGACAGCCCTGTGACTGCAACTGTAGGCTCCCTGG...AGATGCATGCCAGTGGATGCCAGAGGACCAGGCTAATGACTTGTGTGTGCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS GCA 90 bp CAAGACTGCCACCATGCCTGTTCCATGAATGAGCCTGGAAGGAGCTaGTGTACCAACGGTGTGGCCAGAGAACTCCTCCAAATGTCACCT +
Preference number: 5 (lower is better)
Translates to: QDCHHACSMNEPGRS*CTNGVARELLQMSP
Trigger: AGGTGACATTTGGAGGAGTTCTCTGGCCACACCGTTGGTACAGCAGCTCCTTCCAGGCTCATTCATGGAACAGGCATGGTGGCAGTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426896.5
CDS GCA 90 bp ATTCATTTCTTCCCTCTGACCGGGGCTGGCACTCTTCTCCAAGACTaGCACCATGCCTGTTCCATGAATGAGCCTGGAAGGAGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: IHFFPLTGAGTLLQD*HHACSMNEPGRSCC
Trigger: ACAGCAGCTCCTTCCAGGCTCATTCATGGAACAGGCATGGTGGCAGTCTTGGAGAAGAGTGCCAGCCCCGGTCAGAGGGAAGAAATGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475360.6
CDS-3UTR CAA 90 bp CTGGGTCCCGTGGTGATCTCTCCAGCTACTTGCAGACGAATCTTCACTATCTCCAGAGCCACGCTGGTTTaGCATTCGGGTCTTCACCAG +
Preference number: 5 (lower is better)
Translates to: LGPVVISPATCRRIFTISRATLV*HSGLHQ
Trigger: CTGGTGAAGACCCGAATGCAAAACCAGCGTGGCTCT...GGAGATAGTGAAGATTCGTCTGCAAGTAGCTGGAGAGATCACCACGGGACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CAA 90 bp TGCAGTCACAGGGCTGTCAGCCATCAATCGAGGAGCACTGTGCAGGATACTAAGAGAGCCACGCTGGTTTaGCATTCGGGTCTTCACCAG +
Preference number: 5 (lower is better)
Translates to: CSHRAVSHQSRSTVQDTKRATLV*HSGLHQ
Trigger: CTGGTGAAGACCCGAATGCAAAACCAGCGTGGCTCT...CTTAGTATCCTGCACAGTGCTCCTCGATTGATGGCTGACAGCCCTGTGACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS GCA 90 bp TCTTTGACATTTTCTCTGACCGGGGCTGGCACTCTTCTCCAAGACTaGCACCATGCCTGTTCCATGAATGAGCCTGGAAGGAGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: SLTFSLTGAGTLLQD*HHACSMNEPGRSCC
Trigger: ACAGCAGCTCCTTCCAGGCTCATTCATGGAACAGGCATGGTGGCAGTCTTGGAGAAGAGTGCCAGCCCCGGTCAGAGAAAATGTCAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426896.5
CDS-3UTR CAA 90 bp GGCCTCCAGGGAGCCTACAGTTGCAGTCACAGGGCTGTCAGCCATCAATCGAGGAGAGCTGCACGATCTTaGGGTTACTATTTGGATCAT +
Preference number: 5 (lower is better)
Translates to: GLQGAYSCSHRAVSHQSRRAARS*GYYLDH
Trigger: ATGATCCAAATAGTAACCCAAAGATCGTGCAGCTCT...CCTCGATTGATGGCTGACAGCCCTGTGACTGCAACTGTAGGCTCCCTGGAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CAA 90 bp GGCCTCCAGGGAGCCTACAGTTGCAGTCACAGGGCTGTCAGCCATCAATCGAGGTACTCTTTTGAAAGCTaGGCCTTTGCCTTACTGTGT +
Preference number: 5 (lower is better)
Translates to: GLQGAYSCSHRAVSHQSRYSFES*AFALLC
Trigger: ACACAGTAAGGCAAAGGCCAAGCTTTCAAAAGAGTA...CCTCGATTGATGGCTGACAGCCCTGTGACTGCAACTGTAGGCTCCCTGGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CAA 90 bp GGCCTCCAGGGAGCCTACAGTTGCAGTCACAGGGCTGTCAGCCATCAATCGAGGGTATCCTTTACTCTTTaGAAAGCTTGGCCTTTGCCT +
Preference number: 5 (lower is better)
Translates to: GLQGAYSCSHRAVSHQSRVSFTL*KAWPLP
Trigger: AGGCAAAGGCCAAGCTTTCAAAAGAGTAAAGGATAC...CCTCGATTGATGGCTGACAGCCCTGTGACTGCAACTGTAGGCTCCCTGGAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CAA 90 bp GGCCTCCAGGGAGCCTACAGTTGCAGTCACAGGGCTGTCAGCCATCAATCGAGGCTCCAGGCTCGCCTCTaGAAAATATTTGCATACATT +
Preference number: 5 (lower is better)
Translates to: GLQGAYSCSHRAVSHQSRLQARL*KIFAYI
Trigger: AATGTATGCAAATATTTTCAAGAGGCGAGCCTGGAG...CCTCGATTGATGGCTGACAGCCCTGTGACTGCAACTGTAGGCTCCCTGGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CAA 90 bp ATCAGCACACACAAGTCATTAGCCTGGTCCTCTGGCATCCACTGGCATGCATCTCGGAGGAAACACGCTTaGGCACCCTTATACAGACCA +
Preference number: 5 (lower is better)
Translates to: ISTHKSLAWSSGIHWHASRRKHA*APLYRP
Trigger: TGGTCTGTATAAGGGTGCCAAAGCGTGTTTCCTCCG...AGATGCATGCCAGTGGATGCCAGAGGACCAGGCTAATGACTTGTGTGTGCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CAA 90 bp TGCAGTCACAGGGCTGTCAGCCATCAATCGAGGAGCACTGTGCAGGATACTAAGCAACCCATCCTTGGTTaGATCAGCTACTCCTGCCAA +
Preference number: 5 (lower is better)
Translates to: CSHRAVSHQSRSTVQDTKQPILG*ISYSCQ
Trigger: TTGGCAGGAGTAGCTGATCAAACCAAGGATGGGTTG...CTTAGTATCCTGCACAGTGCTCCTCGATTGATGGCTGACAGCCCTGTGACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS CCA 90 bp CAGACATGCTTACATGACAAAAGTCATTACAACTGGAGCAAGAGGTaGCCAGGCAGCCAGTTAAGAAACAACAGGGGAGCTGGTCAGGGA +
Preference number: 5 (lower is better)
Translates to: QTCLHDKSHYNWSKR*PGSQLRNNRGAGQG
Trigger: TCCCTGACCAGCTCCCCTGTTGTTTCTTAACTGGCTGCCTGGCCACCTCTTGCTCCAGTTGTAATGACTTTTGTCATGTAAGCATGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472070.1
CDS-3UTR CAA 90 bp CCTGCCATGGCTCCAGCTGCAAGAAGATTTAAACCTCCCACGTGTCCATTTTCATCTGAACCAGCGGGTTaGAGGCCTCCAAAATCAATG +
Preference number: 5 (lower is better)
Translates to: PAMAPAARRFKPPTCPFSSEPAG*RPPKSM
Trigger: CATTGATTTTGGAGGCCTCAAACCCGCTGGTTCAGA...TGAAAATGGACACGTGGGAGGTTTAAATCTTCTTGCAGCTGGAGCCATGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CAA 90 bp CTGTGCAGGATACTAAGTAACTTGGTCTGTCTCCAGGCTCGCCTCTTGAAAATATTAGTTGTCTGCACCTaGACCGCCATGCTGTGCTCG +
Preference number: 5 (lower is better)
Translates to: LCRILSNLVCLQARLLKILVVCT*TAMLCS
Trigger: CGAGCACAGCATGGCGGTCAAGGTGCAGACAACTAA...TATTTTCAAGAGGCGAGCCTGGAGACAGACCAAGTTACTTAGTATCCTGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CAA 90 bp TTTGGCACCCTTATACAGACCAAAAATTCCCAAGTCCCGGAGCACATTCAGGGCTCTTGCATGTTCCAATaGCAGCTCCTGGAGAAACTG +
Preference number: 5 (lower is better)
Translates to: FGTLIQTKNSQVPEHIQGSCMFQ*QLLEKL
Trigger: CAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGA...GCCCTGAATGTGCTCCGGGACTTGGGAATTTTTGGTCTGTATAAGGGTGCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CAA 90 bp CTAATTCTTTTGTTCCTGGAGGGCCTCCAGGGAGCCTACAGTTGCAGTCACAGGATGCCACTTTTGCTTTaGTCTTTGAGTGCAAAGGCT +
Preference number: 5 (lower is better)
Translates to: LILLFLEGLQGAYSCSHRMPLLL*SLSAKA
Trigger: AGCCTTTGCACTCAAAGACAAAAGCAAAAGTGGCAT...CCTGTGACTGCAACTGTAGGCTCCCTGGAGGCCCTCCAGGAACAAAAGAATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CAA 90 bp TCCCGGAGAATCTTCCTGAAACAGTCGATGACACCACTGTATGTCGTCTGGCCATACAGAAAGAAGAGTTaGACTCCTCAGCTCAGTCAG +
Preference number: 5 (lower is better)
Translates to: SRRIFLKQSMTPLYVVWPYRKKS*TPQLSQ
Trigger: CTGACTGAGCTGAGGAGTCAAACTCTTCTTTCTGTA...TGGCCAGACGACATACAGTGGTGTCATCGACTGTTTCAGGAAGATTCTCCGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CAA 90 bp CTGGAGAAACTGCGTGAATTCTGTGTAGTTAAGATGCTTCTTCCGGTTATGCCCCAACCCATCCTTGGTTaGATCAGCTACTCCTGCCAA +
Preference number: 5 (lower is better)
Translates to: LEKLREFCVVKMLLPVMPQPILG*ISYSCQ
Trigger: TTGGCAGGAGTAGCTGATCAAACCAAGGATGGGTTG...GGGCATAACCGGAAGAAGCATCTTAACTACACAGAATTCACGCAGTTTCTCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475360.6
CDS-3UTR CAA 90 bp TGCAGTCACAGGGCTGTCAGCCATCAATCGAGGAGCACTGTGCAGGATACTAAGCCGATCATGAGTTATTaGCAATCAGTAGTCAATCAG +
Preference number: 5 (lower is better)
Translates to: CSHRAVSHQSRSTVQDTKPIMSY*QSVVNQ
Trigger: CTGATTGACTACTGATTGCAAATAACTCATGATCGG...CTTAGTATCCTGCACAGTGCTCCTCGATTGATGGCTGACAGCCCTGTGACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CAA 90 bp AGTGCAAAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCGTGCAGCAATCAGCAAAGTaGGAAGAAGGCATTGGATGT +
Preference number: 5 (lower is better)
Translates to: SAKACLACSNCSSWRNCVQQSAK*EEGIGC
Trigger: ACATCCAATGCCTTCTTCCAACTTTGCTGATTGCTG...CACGCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTTTGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475360.6
CDS CCA 90 bp TGTGACTCCTTTCAGACATGCTTACATGACAAAAGTCATTACAACTaGAGCAAGAGGTGGCCAGGCAGCCAGTTAAGAAACAACAGGGGA +
Preference number: 5 (lower is better)
Translates to: CDSFQTCLHDKSHYN*SKRWPGSQLRNNRG
Trigger: TCCCCTGTTGTTTCTTAACTGGCTGCCTGGCCACCTCTTGCTCCAGTTGTAATGACTTTTGTCATGTAAGCATGTCTGAAAGGAGTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472070.1
CDS-3UTR CAA 90 bp AACACGCTTTGGCACCCTTATACAGACCAAAAATTCCCAAGTCCCGGAGCACATGATCTCTCCAGCTACTaGCAGACGAATCTTCACTAT +
Preference number: 5 (lower is better)
Translates to: NTLWHPYTDQKFPSPGAHDLSSY*QTNLHY
Trigger: ATAGTGAAGATTCGTCTGCAAGTAGCTGGAGAGATC...ATGTGCTCCGGGACTTGGGAATTTTTGGTCTGTATAAGGGTGCCAAAGCGTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CAA 90 bp TTGAGTGCAAAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCAGAGCTGCACGATCTTaGGGTTACTATTTGGATCAT +
Preference number: 5 (lower is better)
Translates to: LSAKACLACSNCSSWRNCRAARS*GYYLDH
Trigger: ATGATCCAAATAGTAACCCAAAGATCGTGCAGCTCT...GCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTTTGCACTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
CDS-3UTR CAA 90 bp TTGAGTGCAAAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCATGCCACTTTTGCTTTaGTCTTTGAGTGCAAAGGCT +
Preference number: 5 (lower is better)
Translates to: LSAKACLACSNCSSWRNCMPLLL*SLSAKA
Trigger: AGCCTTTGCACTCAAAGACAAAAGCAAAAGTGGCAT...GCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTTTGCACTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
CDS-3UTR CAA 90 bp GAAGATTTAAACCTCCCACGTGTCCATTTTCATCAGCCAGAAGTAGTTTGCAATCGGAGGAAACACGCTTaGGCACCCTTATACAGACCA +
Preference number: 5 (lower is better)
Translates to: EDLNLPRVHFHQPEVVCNRRKHA*APLYRP
Trigger: TGGTCTGTATAAGGGTGCCAAAGCGTGTTTCCTCCG...ATTGCAAACTACTTCTGGCTGATGAAAATGGACACGTGGGAGGTTTAAATCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CAA 90 bp GGTAAGCGGGACACTTTCCCATCTCACTCTAGATACATACATAGGATTCTTTTGTCTGAACCAGCGGGTTaGAGGCCTCCAAAATCAATG +
Preference number: 5 (lower is better)
Translates to: GKRDTFPSHSRYIHRILLSEPAG*RPPKSM
Trigger: CATTGATTTTGGAGGCCTCAAACCCGCTGGTTCAGA...CAAAAGAATCCTATGTATGTATCTAGAGTGAGATGGGAAAGTGTCCCGCTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CAA 90 bp CTGGAGAAACTGCGTGAATTCTGTGTAGTTAAGATGCTTCTTCCGGTTATGCCCTCTCCATTTCCACTCTaGTCAAACAACTGGAAAGCC +
Preference number: 5 (lower is better)
Translates to: LEKLREFCVVKMLLPVMPSPFPL*SNNWKA
Trigger: GGCTTTCCAGTTGTTTGACAAGAGTGGAAATGGAGA...GGGCATAACCGGAAGAAGCATCTTAACTACACAGAATTCACGCAGTTTCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475360.6
CDS-3UTR CAA 90 bp AGTGCAAAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCGTGATAGCTCTGAATAGATaGCAGCAATCAGCAAAGTTG +
Preference number: 5 (lower is better)
Translates to: SAKACLACSNCSSWRNCVIALNR*QQSAKL
Trigger: CAACTTTGCTGATTGCTGCAATCTATTCAGAGCTAT...CACGCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTTTGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475360.6
CDS CCA 90 bp ATCAGCTACTCCTGCCAAGAGCTGCACGATCTTTGGGTTACTATTTaGATCATTATACAGTCCAAGATAGCGCTGAACAAAGTCTTCTGG +
Preference number: 5 (lower is better)
Translates to: ISYSCQELHDLWVTI*IIIQSKIALNKVFW
Trigger: CCAGAAGACTTTGTTCAGCGCTATCTTGGACTGTATAATGATCCAAATAGTAACCCAAAGATCGTGCAGCTCTTGGCAGGAGTAGCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263812.8
ENST00000422440.7
ENST00000426896.5
ENST00000464063.1
ENST00000472748.5
ENST00000475360.6
ENST00000484227.5
CDS CCA 90 bp ATCCTTGGTTTGATCAGCTACTCCTGCCAAGAGCTGCACGATCTTTaGGTTACTATTTGGATCATTATACAGTCCAAGATAGCGCTGAAC +
Preference number: 5 (lower is better)
Translates to: ILGLISYSCQELHDL*VTIWIIIQSKIALN
Trigger: GTTCAGCGCTATCTTGGACTGTATAATGATCCAAATAGTAACCCAAAGATCGTGCAGCTCTTGGCAGGAGTAGCTGATCAAACCAAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263812.8
ENST00000422440.7
ENST00000426896.5
ENST00000464063.1
ENST00000472748.5
ENST00000475360.6
ENST00000484227.5
CDS-3UTR CAA 90 bp AAGGTGGAAGAAAGGGCGAACCCGATCATGAGTTATTTGCAATCAGTAGTCAATTCTTGCATGTTCCAATaGCAGCTCCTGGAGAAACTG +
Preference number: 5 (lower is better)
Translates to: KVEERANPIMSYLQSVVNSCMFQ*QLLEKL
Trigger: CAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGA...ATTGACTACTGATTGCAAATAACTCATGATCGGGTTCGCCCTTTCTTCCACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CAA 90 bp AAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCGTGAATTCTTTTGAGTGCAAAGGCTaGTCTTGCATGTTCCAATTG +
Preference number: 5 (lower is better)
Translates to: KACLACSNCSSWRNCVNSFECKG*SCMFQL
Trigger: CAATTGGAACATGCAAGACAAGCCTTTGCACTCAAA...AGAATTCACGCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
CDS-3UTR CAA 90 bp AAGATGCTTCTTCCGGTTATGCCCAAAATGCAGTCGGATAAATTCACAATCCCAAGCAACCCCTATAAGTaGTGGTATCAGACCCCTGTA +
Preference number: 5 (lower is better)
Translates to: KMLLPVMPKMQSDKFTIPSNPYK*WYQTPV
Trigger: TACAGGGGTCTGATACCACAACTTATAGGGGTTGCT...TGGGATTGTGAATTTATCCGACTGCATTTTGGGCATAACCGGAAGAAGCATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CAA 90 bp AACACGCTTTGGCACCCTTATACAGACCAAAAATTCCCAAGTCCCGGAGCACATAAACAGGAAAATAGATaGCAGAGAAGGGAATGTCTC +
Preference number: 5 (lower is better)
Translates to: NTLWHPYTDQKFPSPGAHKQENR*QRRECL
Trigger: GAGACATTCCCTTCTCTGCAATCTATTTTCCTGTTT...ATGTGCTCCGGGACTTGGGAATTTTTGGTCTGTATAAGGGTGCCAAAGCGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CAA 90 bp AATGGTAACCATGATGTCACTGAAATCCAGACCAGAAATCATGCCACTTTTGCTCTTCAAGGCGCCATTTaGCCACACTCAACAGTTGTC +
Preference number: 5 (lower is better)
Translates to: NGNHDVTEIQTRNHATFALQGAI*PHSTVV
Trigger: GACAACTGTTGAGTGTGGCAAAATGGCGCCTTGAAG...AGCAAAAGTGGCATGATTTCTGGTCTGGATTTCAGTGACATCATGGTTACCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CAA 90 bp GGTAACCATGATGTCACTGAAATCCAGACCAGAAATCATGCCACTTTTGCTTTTAGTTGGAAGAAGGCATaGGATGTCACTGGGGAGATG +
Preference number: 5 (lower is better)
Translates to: GNHDVTEIQTRNHATFAFSWKKA*DVTGEM
Trigger: CATCTCCCCAGTGACATCCAATGCCTTCTTCCAACT...AAAAGCAAAAGTGGCATGATTTCTGGTCTGGATTTCAGTGACATCATGGTTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000475360.6
CDS GCA 90 bp CTCTTGATAGGAGATCAACCCATCCTTGGTTTGATCAGCTACTCCTaGCAAGAGCTGCACGATCTTTGGGTTACTATTTGGATCATTATA +
Preference number: 5 (lower is better)
Translates to: LLIGDQPILGLISYS*QELHDLWVTIWIII
Trigger: TATAATGATCCAAATAGTAACCCAAAGATCGTGCAGCTCTTGGCAGGAGTAGCTGATCAAACCAAGGATGGGTTGATCTCCTATCAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000422440.7
ENST00000426896.5
ENST00000464063.1
ENST00000472748.5
ENST00000475360.6
ENST00000484227.5
CDS CCA 90 bp ATTTGGATCATTATACAGTCCAAGATAGCGCTGAACAAAGTCTTCTaGGGTCATATAACGCTCTCCATCAACCTCAGTACTGGCATACTG +
Preference number: 5 (lower is better)
Translates to: IWIIIQSKIALNKVF*GHITLSINLSTGIL
Trigger: CAGTATGCCAGTACTGAGGTTGATGGAGAGCGTTATATGACCCCAGAAGACTTTGTTCAGCGCTATCTTGGACTGTATAATGATCCAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263812.8
ENST00000422440.7
ENST00000426896.5
ENST00000464063.1
ENST00000472748.5
ENST00000475360.6
ENST00000484227.5
CDS CCA 90 bp AGATTGCAGCAATCAGCAAAGTTGGAAGAAGGCATTGGATGTCACTaGGGAGATGGGATTCTCATCTTTTCTTTGAAATGGAATGCAGGA +
Preference number: 5 (lower is better)
Translates to: RLQQSAKLEEGIGCH*GDGILIFSLKWNAG
Trigger: TCCTGCATTCCATTTCAAAGAAAAGATGAGAATCCCATCTCCCCAGTGACATCCAATGCCTTCTTCCAACTTTGCTGATTGCTGCAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475360.6
CDS-3UTR CAA 90 bp GGTAACCATGATGTCACTGAAATCCAGACCAGAAATCATGCCACTTTTGCTTTTTCTTGCATGTTCCAATaGCAGCTCCTGGAGAAACTG +
Preference number: 5 (lower is better)
Translates to: GNHDVTEIQTRNHATFAFSCMFQ*QLLEKL
Trigger: CAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGA...AAAAGCAAAAGTGGCATGATTTCTGGTCTGGATTTCAGTGACATCATGGTTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
CDS-3UTR CAA 90 bp CAGCTCCTGGAGAAACTGCGTGAATTCTGTGTAGTTAAGATGCTTCTTCCGGTTCTTTTGCTTTTGTCTTaGAGTGCAAAGGCTTGTCTT +
Preference number: 5 (lower is better)
Translates to: QLLEKLREFCVVKMLLPVLLLLS*SAKACL
Trigger: AAGACAAGCCTTTGCACTCAAAGACAAAAGCAAAAG...AACCGGAAGAAGCATCTTAACTACACAGAATTCACGCAGTTTCTCCAGGAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
CDS-3UTR CAA 90 bp TCTTTTGAAAGCTTGGCCTTTGCCTTACTGTGTCAAAGGAAAGCAAAACTAAGCAGCAACCCCTATAAGTaGTGGTATCAGACCCCTGTA +
Preference number: 5 (lower is better)
Translates to: SFESLAFALLCQRKAKLSSNPYK*WYQTPV
Trigger: TACAGGGGTCTGATACCACAACTTATAGGGGTTGCT...GCTTAGTTTTGCTTTCCTTTGACACAGTAAGGCAAAGGCCAAGCTTTCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CAA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCATTAGTTGTCTGCACCTaGACCGCCATGCTGTGCTCG +
Preference number: 5 (lower is better)
Translates to: VLYILRTSSMLFSNELNALVVCT*TAMLCS
Trigger: CGAGCACAGCATGGCGGTCAAGGTGCAGACAACTAA...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426896.5
CDS-3UTR CAA 90 bp AAGGCTTGTCTTGCATGTTCCAATTGCAGCTCCTGGAGAAACTGCGTGAATTCTAAATGCCAAAAACTCTaGATAGGAGATCAACCCATC +
Preference number: 5 (lower is better)
Translates to: KACLACSNCSSWRNCVNSKCQKL*IGDQPI
Trigger: GATGGGTTGATCTCCTATCAAGAGTTTTTGGCATTT...AGAATTCACGCAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGACAAGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475360.6
CDS CCA 90 bp ACTCCTCCAAATGTCACCTCTCCATTTCCACTCTTGTCAAACAACTaGAAAGCCACTATGAACATGGAATCTGGAGCACATAAAACAGAT +
Preference number: 5 (lower is better)
Translates to: TPPNVTSPFPLLSNN*KATMNMESGAHKTD
Trigger: ATCTGTTTTATGTGCTCCAGATTCCATGTTCATAGTGGCTTTCCAGTTGTTTGACAAGAGTGGAAATGGAGAGGTGACATTTGGAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426896.5
CDS CCA 90 bp CCCTTACCAAATGTCACCTCTCCATTTCCACTCTTGTCAAACAACTaGAAAGCCACTATGAACATGGAATCTGGAGCACATAAAACAGAT +
Preference number: 5 (lower is better)
Translates to: PLPNVTSPFPLLSNN*KATMNMESGAHKTD
Trigger: ATCTGTTTTATGTGCTCCAGATTCCATGTTCATAGTGGCTTTCCAGTTGTTTGACAAGAGTGGAAATGGAGAGGTGACATTTGGTAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484227.5
CDS-3UTR CAA 90 bp AAGATGCTTCTTCCGGTTATGCCCAAAATGCAGTCGGATAAATTCACAATCCCAAGAGCTGCACGATCTTaGGGTTACTATTTGGATCAT +
Preference number: 5 (lower is better)
Translates to: KMLLPVMPKMQSDKFTIPRAARS*GYYLDH
Trigger: ATGATCCAAATAGTAACCCAAAGATCGTGCAGCTCT...TGGGATTGTGAATTTATCCGACTGCATTTTGGGCATAACCGGAAGAAGCATCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
CDS-3UTR CAA 90 bp GAAGATTTAAACCTCCCACGTGTCCATTTTCATCAGCCAGAAGTAGTTTGCAATTTTTCCATCCTTGGTTaGATCAGCTACTCCTGCCAA +
Preference number: 5 (lower is better)
Translates to: EDLNLPRVHFHQPEVVCNFSILG*ISYSCQ
Trigger: TTGGCAGGAGTAGCTGATCAAACCAAGGATGGAAAA...ATTGCAAACTACTTCTGGCTGATGAAAATGGACACGTGGGAGGTTTAAATCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CAA 90 bp GGTAAGCGGGACACTTTCCCATCTCACTCTAGATACATACATAGGATTCTTTTGTTTGAGTGCAAAGGCTaGTCTTGCATGTTCCAATTG +
Preference number: 5 (lower is better)
Translates to: GKRDTFPSHSRYIHRILLFECKG*SCMFQL
Trigger: CAATTGGAACATGCAAGACAAGCCTTTGCACTCAAA...CAAAAGAATCCTATGTATGTATCTAGAGTGAGATGGGAAAGTGTCCCGCTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS TCA 90 bp GGAATACTGCTAACATCTACTATAGAGCCTGCAACTTCAACCACTTaGGCGGAACTCAAAACTCTTTACATAGATGTCTGGCCATTAATG +
Preference number: 5 (lower is better)
Translates to: GILLTSTIEPATSTT*AELKTLYIDVWPLM
Trigger: CATTAATGGCCAGACATCTATGTAAAGAGTTTTGAGTTCCGCTCAAGTGGTTGAAGTTGCAGGCTCTATAGTAGATGTTAGCAGTATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472070.1
CDS-3UTR CAA 90 bp GGTAACCATGATGTCACTGAAATCCAGACCAGAAATCATGCCACTTTTGCTTTTTTTGAGTGCAAAGGCTaGTCTTGCATGTTCCAATTG +
Preference number: 5 (lower is better)
Translates to: GNHDVTEIQTRNHATFAFFECKG*SCMFQL
Trigger: CAATTGGAACATGCAAGACAAGCCTTTGCACTCAAA...AAAAGCAAAAGTGGCATGATTTCTGGTCTGGATTTCAGTGACATCATGGTTACC
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000475360.6
CDS-3UTR CAA 90 bp CAAATCACATCCATATCAAAGTGTAGATGTGGCTGTCAAGATCTATGTTTAGATCTTCAAGGCGCCATTTaGCCACACTCAACAGTTGTC +
Preference number: 5 (lower is better)
Translates to: QITSISKCRCGCQDLCLDLQGAI*PHSTVV
Trigger: GACAACTGTTGAGTGTGGCAAAATGGCGCCTTGAAG...ATCTAAACATAGATCTTGACAGCCACATCTACACTTTGATATGGATGTGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CAA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCACAACCCATCCTTGGTTaGATCAGCTACTCCTGCCAA +
Preference number: 5 (lower is better)
Translates to: VLYILRTSSMLFSNELNAQPILG*ISYSCQ
Trigger: TTGGCAGGAGTAGCTGATCAAACCAAGGATGGGTTG...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426896.5
CDS-3UTR CAA 90 bp CAAAACATTCTGTACATTTCAAGCCACTCAGAACCGCATTACATTTCTACAAATAGGATACTAAGTAACTaGGTCTGTCTCCAGGCTCGC +
Preference number: 5 (lower is better)
Translates to: QNILYISSHSEPHYISTNRILSN*VCLQAR
Trigger: GCGAGCCTGGAGACAGACCAAGTTACTTAGTATCCT...ATTTGTAGAAATGTAATGCGGTTCTGAGTGGCTTGAAATGTACAGAATGTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS TCA 90 bp TATATAAGTCTGCAAGCTGATATAGAATATCAATTTCTAGTGGTGTaGCTTGTCCATAGCGTATGGCACTCTGGGCAAATTCCTCTGGAA +
Preference number: 5 (lower is better)
Translates to: YISLQADIEYQFLVV*LVHSVWHSGQIPLE
Trigger: TTCCAGAGGAATTTGCCCAGAGTGCCATACGCTATGGACAAGTCACACCACTAGAAATTGATATTCTATATCAGCTTGCAGACTTATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485880.1
CDS CCA 90 bp CAAAATCCAAATGTCACCTCTCCATTTCCACTCTTGTCAAACAACTaGAAAGCCACTATGAACATGGAATCTGGAGCACATAAAACAGAT +
Preference number: 5 (lower is better)
Translates to: QNPNVTSPFPLLSNN*KATMNMESGAHKTD
Trigger: ATCTGTTTTATGTGCTCCAGATTCCATGTTCATAGTGGCTTTCCAGTTGTTTGACAAGAGTGGAAATGGAGAGGTGACATTTGGATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475360.6
CDS-3UTR CAA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCATCTTGCATGTTCCAATaGCAGCTCCTGGAGAAACTG +
Preference number: 5 (lower is better)
Translates to: VLYILRTSSMLFSNELNASCMFQ*QLLEKL
Trigger: CAGTTTCTCCAGGAGCTGCAATTGGAACATGCAAGA...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000426896.5
CDS-3UTR CAA 90 bp GAAGATTTAAACCTCCCACGTGTCCATTTTCATCAGCCAGAAGTAGTTTGCAATCTTTTGCTTTTGTCTTaGAGTGCAAAGGCTTGTCTT +
Preference number: 5 (lower is better)
Translates to: EDLNLPRVHFHQPEVVCNLLLLS*SAKACL
Trigger: AAGACAAGCCTTTGCACTCAAAGACAAAAGCAAAAG...ATTGCAAACTACTTCTGGCTGATGAAAATGGACACGTGGGAGGTTTAAATCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CAA 90 bp TATATGTATATGTCATACAGAAAGAAGAGTTTGACTCCTCAGCTCAGTCAGTACTACAGAAAGAAGAGTTaGACTCCTCAGCTCAGTCAG +
Preference number: 5 (lower is better)
Translates to: YMYMSYRKKSLTPQLSQYYRKKS*TPQLSQ
Trigger: CTGACTGAGCTGAGGAGTCAAACTCTTCTTTCTGTA...GTACTGACTGAGCTGAGGAGTCAAACTCTTCTTTCTGTATGACATATACATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR CAA 90 bp ATTTTTCTGTTTTCTATAAAGGTGGAAGAAAGGGCGAACCCGATCATGAGTTATTCTCCATTTCCACTCTaGTCAAACAACTGGAAAGCC +
Preference number: 5 (lower is better)
Translates to: IFLFSIKVEERANPIMSYSPFPL*SNNWKA
Trigger: GGCTTTCCAGTTGTTTGACAAGAGTGGAAATGGAGA...ATAACTCATGATCGGGTTCGCCCTTTCTTCCACCTTTATAGAAAACAGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CAA 90 bp TCTTTTGAAAGCTTGGCCTTTGCCTTACTGTGTCAAAGGAAAGCAAAACTAAGCCAACTGTATTATTATTaGTTCCACTCCCATGAGACC +
Preference number: 5 (lower is better)
Translates to: SFESLAFALLCQRKAKLSQLYYY*FHSHET
Trigger: GGTCTCATGGGAGTGGAACAAATAATAATACAGTTG...GCTTAGTTTTGCTTTCCTTTGACACAGTAAGGCAAAGGCCAAGCTTTCAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CAA 90 bp CAAAACATTCTGTACATTTCAAGCCACTCAGAACCGCATTACATTTCTACAAATGATCTCTCCAGCTACTaGCAGACGAATCTTCACTAT +
Preference number: 5 (lower is better)
Translates to: QNILYISSHSEPHYISTNDLSSY*QTNLHY
Trigger: ATAGTGAAGATTCGTCTGCAAGTAGCTGGAGAGATC...ATTTGTAGAAATGTAATGCGGTTCTGAGTGGCTTGAAATGTACAGAATGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR CAA 90 bp AATATGTACAATCACTGTAAGTGCAAGCTGTGCAAAGCAGAGTCTAGAACACTAAAACAGGAAAATAGATaGCAGAGAAGGGAATGTCTC +
Preference number: 5 (lower is better)
Translates to: NMYNHCKCKLCKAESRTLKQENR*QRRECL
Trigger: GAGACATTCCCTTCTCTGCAATCTATTTTCCTGTTT...TAGTGTTCTAGACTCTGCTTTGCACAGCTTGCACTTACAGTGATTGTACATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000422440.7
CDS-3UTR CAA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCATCTCCATTTCCACTCTaGTCAAACAACTGGAAAGCC +
Preference number: 5 (lower is better)
Translates to: VLYILRTSSMLFSNELNASPFPL*SNNWKA
Trigger: GGCTTTCCAGTTGTTTGACAAGAGTGGAAATGGAGA...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426896.5
CDS GCA 90 bp AAAATTTCTTTGACATTTTCCATCCTTGGTTTGATCAGCTACTCCTaGCAAGAGCTGCACGATCTTTGGGTTACTATTTGGATCATTATA +
Preference number: 5 (lower is better)
Translates to: KISLTFSILGLISYS*QELHDLWVTIWIII
Trigger: TATAATGATCCAAATAGTAACCCAAAGATCGTGCAGCTCTTGGCAGGAGTAGCTGATCAAACCAAGGATGGAAAATGTCAAAGAAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS-3UTR CAA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCAAGAGCTGCACGATCTTaGGGTTACTATTTGGATCAT +
Preference number: 5 (lower is better)
Translates to: VLYILRTSSMLFSNELNARAARS*GYYLDH
Trigger: ATGATCCAAATAGTAACCCAAAGATCGTGCAGCTCT...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000426896.5
CDS-3UTR CAA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCATTTGAGTGCAAAGGCTaGTCTTGCATGTTCCAATTG +
Preference number: 5 (lower is better)
Translates to: VLYILRTSSMLFSNELNAFECKG*SCMFQL
Trigger: CAATTGGAACATGCAAGACAAGCCTTTGCACTCAAA...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000426896.5
CDS-3UTR CAA 90 bp ATTTTTCTGTTTTCTATAAAGGTGGAAGAAAGGGCGAACCCGATCATGAGTTATCTTTTGCTTTTGTCTTaGAGTGCAAAGGCTTGTCTT +
Preference number: 5 (lower is better)
Translates to: IFLFSIKVEERANPIMSYLLLLS*SAKACL
Trigger: AAGACAAGCCTTTGCACTCAAAGACAAAAGCAAAAG...ATAACTCATGATCGGGTTCGCCCTTTCTTCCACCTTTATAGAAAACAGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CAA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCAATGCCACTTTTGCTTTaGTCTTTGAGTGCAAAGGCT +
Preference number: 5 (lower is better)
Translates to: VLYILRTSSMLFSNELNAMPLLL*SLSAKA
Trigger: AGCCTTTGCACTCAAAGACAAAAGCAAAAGTGGCAT...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000426896.5
CDS-3UTR CAA 90 bp GCAGAGTCTAGAACACTAATTCATGCCAAGGCTTACAAAAACATTTCAACACATAAATGCCAAAAACTCTaGATAGGAGATCAACCCATC +
Preference number: 5 (lower is better)
Translates to: AESRTLIHAKAYKNISTHKCQKL*IGDQPI
Trigger: GATGGGTTGATCTCCTATCAAGAGTTTTTGGCATTT...ATGTGTTGAAATGTTTTTGTAAGCCTTGGCATGAATTAGTGTTCTAGACTCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000422440.7
CDS-3UTR CAA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCACTTTTGCTTTTGTCTTaGAGTGCAAAGGCTTGTCTT +
Preference number: 5 (lower is better)
Translates to: VLYILRTSSMLFSNELNALLLLS*SAKACL
Trigger: AAGACAAGCCTTTGCACTCAAAGACAAAAGCAAAAG...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263812.8
ENST00000426896.5
CDS-3UTR CAA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCAAAATGCCAAAAACTCTaGATAGGAGATCAACCCATC +
Preference number: 5 (lower is better)
Translates to: VLYILRTSSMLFSNELNAKCQKL*IGDQPI
Trigger: GATGGGTTGATCTCCTATCAAGAGTTTTTGGCATTT...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426896.5
CDS-3UTR CAA 90 bp GTGCTATATATCTTACGAACAAGCTCCATGTTATTCAGTAACGAGTTAAATGCATGTCCAAAAATTTCTTaGACATTTTCTCTGACCGGG +
Preference number: 5 (lower is better)
Translates to: VLYILRTSSMLFSNELNACPKIS*TFSLTG
Trigger: CCCGGTCAGAGAAAATGTCAAAGAAATTTTTGGACA...TGCATTTAACTCGTTACTGAATAACATGGAGCTTGTTCGTAAGATATATAGCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426896.5
CDS CCA 72 bp GCGCGCGAGCCGCGGCTGGAGCCCGCCTCTCGCGGCTaGAGAGGACTCAGCCGGCCGCGGGTTCTGCTGCTT +
Preference number: 6 (lower is better)
Translates to: AREPRLEPASRG*RGLSRPRVLLL
Trigger: AAGCAGCAGAACCCGCGGCCGGCTGAGTCCTCTCCAGCCGCGAGAGGCGGGCTCCAGCCGCGGCTCGCGCGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464063.1
ENST00000472748.5
CDS GCA 72 bp GACTCAGCCGGCCGCGGGTTCTGCTGCTTGCCCGGGTaGCCTAGCCGCTTCCCAGCCAGGGCTCCCGCAGTC +
Preference number: 6 (lower is better)
Translates to: DSAGRGFCCLPG*PSRFPARAPAV
Trigger: GACTGCGGGAGCCCTGGCTGGGAAGCGGCTAGGGCACCCGGGCAAGCAGCAGAACCCGCGGCCGGCTGAGTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464063.1
ENST00000472748.5
CDS GCA 72 bp GCGGCTGGAGAGGACTCAGCCGGCCGCGGGTTCTGCTaGTTGCCCGGGTGCCCTAGCCGCTTCCCAGCCAGG +
Preference number: 6 (lower is better)
Translates to: AAGEDSAGRGFC*LPGCPSRFPAR
Trigger: CCTGGCTGGGAAGCGGCTAGGGCACCCGGGCAAGCAGCAGAACCCGCGGCCGGCTGAGTCCTCTCCAGCCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464063.1
ENST00000472748.5
CDS GCA 72 bp CTCGCGGCTGGAGAGGACTCAGCCGGCCGCGGGTTCTaGTGCTTGCCCGGGTGCCCTAGCCGCTTCCCAGCC +
Preference number: 6 (lower is better)
Translates to: LAAGEDSAGRGF*CLPGCPSRFPA
Trigger: GGCTGGGAAGCGGCTAGGGCACCCGGGCAAGCAGCAGAACCCGCGGCCGGCTGAGTCCTCTCCAGCCGCGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464063.1
ENST00000472748.5
CDS CAA 90 bp CCTCTCGCGGCTGGAGAGGACTCAGCCGGCCGCGGGTTCTGCTGCTaGCCCGGGTGCCCTAGCCGCTTCCCAGCCAGGGCTCCCGCAGTC +
Preference number: 6 (lower is better)
Translates to: PLAAGEDSAGRGFCC*PGCPSRFPARAPAV
Trigger: GACTGCGGGAGCCCTGGCTGGGAAGCGGCTAGGGCACCCGGGCAAGCAGCAGAACCCGCGGCCGGCTGAGTCCTCTCCAGCCGCGAGAGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464063.1
ENST00000472748.5
CDS GCA 72 bp CTGGAGAGGACTCAGCCGGCCGCGGGTTCTGCTGCTTaGCCGGGTGCCCTAGCCGCTTCCCAGCCAGGGCTC +
Preference number: 6 (lower is better)
Translates to: LERTQPAAGSAA*PGALAASQPGL
Trigger: GAGCCCTGGCTGGGAAGCGGCTAGGGCACCCGGGCAAGCAGCAGAACCCGCGGCCGGCTGAGTCCTCTCCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464063.1
ENST00000472748.5
CDS CAA 72 bp GCTGGAGAGGACTCAGCCGGCCGCGGGTTCTGCTGCTaGCCCGGGTGCCCTAGCCGCTTCCCAGCCAGGGCT +
Preference number: 6 (lower is better)
Translates to: AGEDSAGRGFCC*PGCPSRFPARA
Trigger: AGCCCTGGCTGGGAAGCGGCTAGGGCACCCGGGCAAGCAGCAGAACCCGCGGCCGGCTGAGTCCTCTCCAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000464063.1
ENST00000472748.5
CDS CCA 72 bp GTGGCCAGGCAGCCAGTTAAGAAACAACAGGGGAGCTaGTCAGGGAAAGGCCCCTGTGCCCGAGCTCCCTGG +
Preference number: 6 (lower is better)
Translates to: VARQPVKKQQGS*SGKGPCARAPW
Trigger: CCAGGGAGCTCGGGCACAGGGGCCTTTCCCTGACCAGCTCCCCTGTTGTTTCTTAACTGGCTGCCTGGCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000472070.1
CDS CCA 72 bp AGCTGGTCAGGGAAAGGCCCCTGTGCCCGAGCTCCCTaGGGTCATGTTGAGATTGATCAGCAGCAGGACACA +
Preference number: 6 (lower is better)
Translates to: SWSGKGPCARAP*GHVEIDQQQDT
Trigger: TGTGTCCTGCTGCTGATCAATCTCAACATGACCCCAGGGAGCTCGGGCACAGGGGCCTTTCCCTGACCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472070.1
CDS GCA 72 bp TTCCCTCTGACCGGGGCTGGCACTCTTCTCCAAGACTaGCACCATGCCTGTTCCATGAATGAGCCTGGAAGG +
Preference number: 6 (lower is better)
Translates to: FPLTGAGTLLQD*HHACSMNEPGR
Trigger: CCTTCCAGGCTCATTCATGGAACAGGCATGGTGGCAGTCTTGGAGAAGAGTGCCAGCCCCGGTCAGAGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475360.6
CDS GCA 72 bp CACCATGCCTGTTCCATGAATGAGCCTGGAAGGAGCTaGTGTACCAACGGTGTGGCCAGAGAACTCCTCCAA +
Preference number: 6 (lower is better)
Translates to: HHACSMNEPGRS*CTNGVARELLQ
Trigger: TTGGAGGAGTTCTCTGGCCACACCGTTGGTACAGCAGCTCCTTCCAGGCTCATTCATGGAACAGGCATGGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426896.5
CDS GCA 72 bp TTTTCTCTGACCGGGGCTGGCACTCTTCTCCAAGACTaGCACCATGCCTGTTCCATGAATGAGCCTGGAAGG +
Preference number: 6 (lower is better)
Translates to: FSLTGAGTLLQD*HHACSMNEPGR
Trigger: CCTTCCAGGCTCATTCATGGAACAGGCATGGTGGCAGTCTTGGAGAAGAGTGCCAGCCCCGGTCAGAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426896.5
CDS GCA 72 bp CACCATGCCTGTTCCATGAATGAGCCTGGAAGGAGCTaGTGTACCAACGGTGTGGCCAGAGAACTCCTCCTT +
Preference number: 6 (lower is better)
Translates to: HHACSMNEPGRS*CTNGVARELLL
Trigger: AAGGAGGAGTTCTCTGGCCACACCGTTGGTACAGCAGCTCCTTCCAGGCTCATTCATGGAACAGGCATGGTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475360.6
CDS GCA 72 bp GGAGATCAACCCATCCTTGGTTTGATCAGCTACTCCTaGCAAGAGCTGCACGATCTTTGGGTTACTATTTGG +
Preference number: 6 (lower is better)
Translates to: GDQPILGLISYS*QELHDLWVTIW
Trigger: CCAAATAGTAACCCAAAGATCGTGCAGCTCTTGGCAGGAGTAGCTGATCAAACCAAGGATGGGTTGATCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000422440.7
ENST00000426896.5
ENST00000464063.1
ENST00000472748.5
ENST00000475360.6
ENST00000484227.5
CDS CAA 72 bp CACTGTATCCTCACTAGGCGGATGGAGTTGGCAGCCTaGTACGAGGTTCTGCTAGGGAATAATGCAAATACT +
Preference number: 6 (lower is better)
Translates to: HCILTRRMELAA*YEVLLGNNANT
Trigger: AGTATTTGCATTATTCCCTAGCAGAACCTCGTACAAGGCTGCCAACTCCATCCGCCTAGTGAGGATACAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472070.1
CDS CAA 72 bp CCTGAATATCACTGTATCCTCACTAGGCGGATGGAGTaGGCAGCCTTGTACGAGGTTCTGCTAGGGAATAAT +
Preference number: 6 (lower is better)
Translates to: PEYHCILTRRME*AALYEVLLGNN
Trigger: ATTATTCCCTAGCAGAACCTCGTACAAGGCTGCCAACTCCATCCGCCTAGTGAGGATACAGTGATATTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472070.1
CDS CAA 90 bp TCAATTTGGCCTGAATATCACTGTATCCTCACTAGGCGGATGGAGTaGGCAGCCTTGTACGAGGTTCTGCTAGGGAATAATGCAAATACT +
Preference number: 6 (lower is better)
Translates to: SIWPEYHCILTRRME*AALYEVLLGNNANT
Trigger: AGTATTTGCATTATTCCCTAGCAGAACCTCGTACAAGGCTGCCAACTCCATCCGCCTAGTGAGGATACAGTGATATTCAGGCCAAATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472070.1
CDS CAA 90 bp GATCAGCTACTCCTGCCAAGAGCTGCACGATCTTTGGGTTACTATTaGGATCATTATACAGTCCAAGATAGCGCTGAACAAAGTCTTCTG +
Preference number: 6 (lower is better)
Translates to: DQLLLPRAARSLGYY*DHYTVQDSAEQSLL
Trigger: CAGAAGACTTTGTTCAGCGCTATCTTGGACTGTATAATGATCCAAATAGTAACCCAAAGATCGTGCAGCTCTTGGCAGGAGTAGCTGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263812.8
ENST00000422440.7
ENST00000426896.5
ENST00000464063.1
ENST00000472748.5
ENST00000475360.6
ENST00000484227.5
CDS CAA 90 bp CATCCTTGGTTTGATCAGCTACTCCTGCCAAGAGCTGCACGATCTTaGGGTTACTATTTGGATCATTATACAGTCCAAGATAGCGCTGAA +
Preference number: 6 (lower is better)
Translates to: HPWFDQLLLPRAARS*GYYLDHYTVQDSAE
Trigger: TTCAGCGCTATCTTGGACTGTATAATGATCCAAATAGTAACCCAAAGATCGTGCAGCTCTTGGCAGGAGTAGCTGATCAAACCAAGGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263812.8
ENST00000422440.7
ENST00000426896.5
ENST00000464063.1
ENST00000472748.5
ENST00000475360.6
ENST00000484227.5
CDS GCA 72 bp TTGACATTTTCCATCCTTGGTTTGATCAGCTACTCCTaGCAAGAGCTGCACGATCTTTGGGTTACTATTTGG +
Preference number: 6 (lower is better)
Translates to: LTFSILGLISYS*QELHDLWVTIW
Trigger: CCAAATAGTAACCCAAAGATCGTGCAGCTCTTGGCAGGAGTAGCTGATCAAACCAAGGATGGAAAATGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263812.8
CDS CAA 72 bp CTCCTGCCAAGAGCTGCACGATCTTTGGGTTACTATTaGGATCATTATACAGTCCAAGATAGCGCTGAACAA +
Preference number: 6 (lower is better)
Translates to: LLPRAARSLGYY*DHYTVQDSAEQ
Trigger: TTGTTCAGCGCTATCTTGGACTGTATAATGATCCAAATAGTAACCCAAAGATCGTGCAGCTCTTGGCAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263812.8
ENST00000422440.7
ENST00000426896.5
ENST00000464063.1
ENST00000472748.5
ENST00000475360.6
ENST00000484227.5
CDS CAA 72 bp ACTGCACTCTGCATAGGTTGCATACTGAGAATGAACTaGGGCAGTTTATCTTTTCTGGGCTTTGGTTTCCTC +
Preference number: 6 (lower is better)
Translates to: TALCIGCILRMN*GSLSFLGFGFL
Trigger: GAGGAAACCAAAGCCCAGAAAAGATAAACTGCCCAAGTTCATTCTCAGTATGCAACCTATGCAGAGTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464063.1
CDS CCA 72 bp ATTATACAGTCCAAGATAGCGCTGAACAAAGTCTTCTaGGGTCATATAACGCTCTCCATCAACCTCAGTACT +
Preference number: 6 (lower is better)
Translates to: IIQSKIALNKVF*GHITLSINLST
Trigger: AGTACTGAGGTTGATGGAGAGCGTTATATGACCCCAGAAGACTTTGTTCAGCGCTATCTTGGACTGTATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263812.8
ENST00000422440.7
ENST00000426896.5
ENST00000464063.1
ENST00000472748.5
ENST00000475360.6
ENST00000484227.5
CDS CCA 72 bp AAAGTTGGAAGAAGGCATTGGATGTCACTGGGGAGATaGGATTCTCATCTTTTCTTTGAAATGGAATGCAGG +
Preference number: 6 (lower is better)
Translates to: KVGRRHWMSLGR*DSHLFFEMECR
Trigger: CCTGCATTCCATTTCAAAGAAAAGATGAGAATCCCATCTCCCCAGTGACATCCAATGCCTTCTTCCAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475360.6
CDS CAA 72 bp ATAGATTGCAGCAATCAGCAAAGTTGGAAGAAGGCATaGGATGTCACTGGGGAGATGGGATTCTCATCTTTT +
Preference number: 6 (lower is better)
Translates to: IDCSNQQSWKKA*DVTGEMGFSSF
Trigger: AAAAGATGAGAATCCCATCTCCCCAGTGACATCCAATGCCTTCTTCCAACTTTGCTGATTGCTGCAATCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475360.6
CDS TCA 72 bp ATACTTATAATCACTCGCTTGTTTGAAGGGCTACCTTaGGAGTTGACTGTGACTCCTTTCAGACATGCTTAC +
Preference number: 6 (lower is better)
Translates to: ILIITRLFEGLP*ELTVTPFRHAY
Trigger: GTAAGCATGTCTGAAAGGAGTCACAGTCAACTCTCAAGGTAGCCCTTCAAACAAGCGAGTGATTATAAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472070.1
CDS CAA 72 bp TTTGATCAGCTACTCCTGCCAAGAGCTGCACGATCTTaGGGTTACTATTTGGATCATTATACAGTCCAAGAT +
Preference number: 6 (lower is better)
Translates to: FDQLLLPRAARS*GYYLDHYTVQD
Trigger: ATCTTGGACTGTATAATGATCCAAATAGTAACCCAAAGATCGTGCAGCTCTTGGCAGGAGTAGCTGATCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000263812.8
ENST00000422440.7
ENST00000426896.5
ENST00000464063.1
ENST00000472748.5
ENST00000475360.6
ENST00000484227.5
CDS CAA 90 bp AATAAATACTGGGCTGAGTATCTGATGAACTGCACTCTGCATAGGTaGCATACTGAGAATGAACTTGGGCAGTTTATCTTTTCTGGGCTT +
Preference number: 6 (lower is better)
Translates to: NKYWAEYLMNCTLHR*HTENELGQFIFSGL
Trigger: AAGCCCAGAAAAGATAAACTGCCCAAGTTCATTCTCAGTATGCAACCTATGCAGAGTGCAGTTCATCAGATACTCAGCCCAGTATTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464063.1
CDS GCA 72 bp AAAGATAGGAATACTGCTAACATCTACTATAGAGCCTaGAACTTCAACCACTTGAGCGGAACTCAAAACTCT +
Preference number: 6 (lower is better)
Translates to: KDRNTANIYYRA*NFNHLSGTQNS
Trigger: AGAGTTTTGAGTTCCGCTCAAGTGGTTGAAGTTGCAGGCTCTATAGTAGATGTTAGCAGTATTCCTATCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472070.1
CDS CAA 90 bp CTAAGATATCTATTATATCTGTGCAAAAAGGTCAACGGAATGTATTaGTCACAAGAAGCGCCTAACAGTAATACTTACACAGCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: LRYLLYLCKKVNGMY*SQEAPNSNTYTASS
Trigger: GCTGGAGGCTGTGTAAGTATTACTGTTAGGCGCTTCTTGTGACAAATACATTCCGTTGACCTTTTTGCACAGATATAATAGATATCTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000494892.1
CDS CAA 90 bp CATCTTAGTGAGTCACTAAATGTATCTGACACCAAACTACTGTTTTaGCTGATTCTTGTCGTAGTGTGGGAAGTGAATATCAATACTTAT +
Preference number: 6 (lower is better)
Translates to: HLSESLNVSDTKLLF*LILVVVWEVNINTY
Trigger: ATAAGTATTGATATTCACTTCCCACACTACGACAAGAATCAGCAAAAACAGTAGTTTGGTGTCAGATACATTTAGTGACTCACTAAGATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000472070.1