RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC22A11 (Homo sapiens)

Ensembl gene IDs: ENSG00000168065

Ensembl transcript IDs: ENST00000301891.9, ENST00000377581.7, ENST00000377585.7, ENST00000416590.1, ENST00000428570.1, ENST00000460745.1, ENST00000478051.5, ENST00000490834.5

Found 627 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCTGGCCTCTaGCATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCT +
Preference number: 1 (lower is better)
Translates to: QQTATLSTRPRLPGL*HARPLKSPNSPPRS
Trigger: AGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR CCA 90 bp TCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCTaGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCC +
Preference number: 1 (lower is better)
Translates to: SATADGHAVHSATAA*PLPCQALEVAQLAS
Trigger: GGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR GCA 90 bp CCCGCAGAAGCCAGGAGTTGCCCCACCCCCTTTGTGCTCCAAAGCTaGCTTCCTGCAGCCCTGGCTGCTCGCTCGGATCCTCAGTGCACC +
Preference number: 1 (lower is better)
Translates to: PAEARSCPTPFVLQS*LPAALAARSDPQCT
Trigger: GGTGCACTGAGGATCCGAGCGAGCAGCCAGGGCTGCAGGAAGGCAGCTTTGGAGCACAAAGGGGGTGGGGCAACTCCTGGCTTCTGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR GCA 90 bp TGGCTGCTCGCTCGGATCCTCAGTGCACCCCGCCCCATGCCTCAGTaGAGCGTCATCTTCGTGGGCTCTGCGCACGTGTGTGGTAACCTG +
Preference number: 1 (lower is better)
Translates to: WLLARILSAPRPMPQ*SVIFVGSAHVCGNL
Trigger: CAGGTTACCACACACGTGCGCAGAGCCCACGAAGATGACGCTGCACTGAGGCATGGGGCGGGGTGCACTGAGGATCCGAGCGAGCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR CCA 90 bp GGGTTGGAGACGAGGGCTAGGAGCCTCCTGTGCTGGAAAGAGCCCTaGGCTAGGATCAGGGCCGGGTTCGGCCGTGTTTCTGCAAGCTGG +
Preference number: 1 (lower is better)
Translates to: GLETRARSLLCWKEP*ARIRAGFGRVSASW
Trigger: CCAGCTTGCAGAAACACGGCCGAACCCGGCCCTGATCCTAGCCCAGGGCTCTTTCCAGCACAGGAGGCTCCTAGCCCTCGTCTCCAACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR CCA 90 bp CAGTGGCATGGAGGGTTGGAGACGAGGGCTAGGAGCCTCCTGTGCTaGAAAGAGCCCTGGGCTAGGATCAGGGCCGGGTTCGGCCGTGTT +
Preference number: 1 (lower is better)
Translates to: QWHGGLETRARSLLC*KEPWARIRAGFGRV
Trigger: AACACGGCCGAACCCGGCCCTGATCCTAGCCCAGGGCTCTTTCCAGCACAGGAGGCTCCTAGCCCTCGTCTCCAACCCTCCATGCCACTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR GCA 90 bp GGGAATCTGATCAGGGCAGGGAGAAGAGGAGTGAGCTGTGGAAGCTaGCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGG +
Preference number: 1 (lower is better)
Translates to: GNLIRAGRRGVSCGS*LQPQQTATLSTRPR
Trigger: CCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACTCCTCTTCTCCCTGCCCTGATCAGATTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR GCA 90 bp TATCAGTGGCATGGAGGGTTGGAGACGAGGGCTAGGAGCCTCCTGTaGTGGAAAGAGCCCTGGGCTAGGATCAGGGCCGGGTTCGGCCGT +
Preference number: 1 (lower is better)
Translates to: YQWHGGLETRARSLL*WKEPWARIRAGFGR
Trigger: ACGGCCGAACCCGGCCCTGATCCTAGCCCAGGGCTCTTTCCAGCACAGGAGGCTCCTAGCCCTCGTCTCCAACCCTCCATGCCACTGATA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR GCA 90 bp TCGGCCGTGTTTCTGCAAGCTGGCCCCTCCACCACTCTGCACTTTTaGTTCCTTGCCCATCTGAGATGGGCAGCCGGCCTCGACCATCCC +
Preference number: 1 (lower is better)
Translates to: SAVFLQAGPSTTLHF*FLAHLRWAAGLDHP
Trigger: GGGATGGTCGAGGCCGGCTGCCCATCTCAGATGGGCAAGGAAGCAAAAGTGCAGAGTGGTGGAGGGGCCAGCTTGCAGAAACACGGCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR CCA 90 bp CCCTGGGCTAGGATCAGGGCCGGGTTCGGCCGTGTTTCTGCAAGCTaGCCCCTCCACCACTCTGCACTTTTGCTTCCTTGCCCATCTGAG +
Preference number: 1 (lower is better)
Translates to: PWARIRAGFGRVSAS*PLHHSALLLPCPSE
Trigger: CTCAGATGGGCAAGGAAGCAAAAGTGCAGAGTGGTGGAGGGGCCAGCTTGCAGAAACACGGCCGAACCCGGCCCTGATCCTAGCCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR CCA 90 bp CCCCACACGCCTCCTTGGCTGCGTGCCTCGGGCCAGTGCACAACCTaGACACCTGTATCTGGCAGCTCTCTCAGCAGGTTCCATTTATTT +
Preference number: 1 (lower is better)
Translates to: PHTPPWLRASGQCTT*TPVSGSSLSRFHLF
Trigger: AAATAAATGGAACCTGCTGAGAGAGCTGCCAGATACAGGTGTCCAGGTTGTGCACTGGCCCGAGGCACGCAGCCAAGGAGGCGTGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR TCA 90 bp TGGTGGGGTGAGATTGGAACCCAGTCTCTGGTTGGCGTGGCTGAGTaGAGGTGTAAAGACATGAGCCTGGCAGGGAAAGGGAGGGGAACC +
Preference number: 1 (lower is better)
Translates to: WWGEIGTQSLVGVAE*RCKDMSLAGKGRGT
Trigger: GGTTCCCCTCCCTTTCCCTGCCAGGCTCATGTCTTTACACCTTCACTCAGCCACGCCAACCAGAGACTGGGTTCCAATCTCACCCCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR TCA 90 bp GGGCTCCATGCAGGCACAATTTCTAGAGCGAGGTACTTTCCACAGTaGCGGCCTCTTGCCGGTTGCCCTGGGCTGCTGTTGATTTCTGGC +
Preference number: 1 (lower is better)
Translates to: GLHAGTISRARYFPQ*RPLAGCPGLLLISG
Trigger: GCCAGAAATCAACAGCAGCCCAGGGCAACCGGCAAGAGGCCGTCACTGTGGAAAGTACCTCGCTCTAGAAATTGTGCCTGCATGGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428570.1
3UTR CCA 90 bp TTGGCTGCGTGCCTCGGGCCAGTGCACAACCTGGACACCTGTATCTaGCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGA +
Preference number: 1 (lower is better)
Translates to: LAACLGPVHNLDTCI*QLSQQVPFIWPVLR
Trigger: TCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGCCAGATACAGGTGTCCAGGTTGTGCACTGGCCCGAGGCACGCAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR CCA 90 bp TGTACACAGGGTGAAAGAGGTGAGTTGAGGGGCCTGAGATTGAGGTaGCCCAGAGTGGGGTCTCCAGGGAAGGGCATGAGGGTAACTTTG +
Preference number: 1 (lower is better)
Translates to: CTQGERGELRGLRLR*PRVGSPGKGMRVTL
Trigger: CAAAGTTACCCTCATGCCCTTCCCTGGAGACCCCACTCTGGGCCACCTCAATCTCAGGCCCCTCAACTCACCTCTTTCACCCTGTGTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR TCA 90 bp GAACCCAGTCTCTGGTTGGCGTGGCTGAGTGAAGGTGTAAAGACATaGGCCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTG +
Preference number: 1 (lower is better)
Translates to: EPSLWLAWLSEGVKT*AWQGKGGEPSRYWL
Trigger: CAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGGCTCATGTCTTTACACCTTCACTCAGCCACGCCAACCAGAGACTGGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR CCA 90 bp GATCCTTATTGTGAGCCACTGGAGGGCTTTCAGCAGGGAGGGATTTaGTTTGGATTGCGTTTCTTAATAAGCATGGTGGCTGTTGTGCAG +
Preference number: 1 (lower is better)
Translates to: DPYCEPLEGFQQGGI*FGLRFLISMVAVVQ
Trigger: CTGCACAACAGCCACCATGCTTATTAAGAAACGCAATCCAAACCAAATCCCTCCCTGCTGAAAGCCCTCCAGTGGCTCACAATAAGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR-3UTR TCA 90 bp GCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCTGGCCGAAGGTGTAAAGACATaGGCCTGGCAGGGAAAGGGA +
Preference number: 2 (lower is better)
Translates to: AFSHSRRPRCPLGHGCLAEGVKT*AWQGKG
Trigger: TCCCTTTCCCTGCCAGGCTCATGTCTTTACACCTTC...GGCCAGGCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR GCA 90 bp TCGGCCACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCGTGAGCTGTGGAAGCTaGCTTCAGCCACAGCAGACG +
Preference number: 2 (lower is better)
Translates to: SATAAWPLPCQALEVAQLVSCGS*LQPQQT
Trigger: CGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCAC...GAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGTGGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR GCA 90 bp GAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCGTGAGCTGTGGAAGCTaGCTTCAGCCACAGCAGACG +
Preference number: 2 (lower is better)
Translates to: EAAFSHSRRPRCPLGHGCVSCGS*LQPQQT
Trigger: CGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCAC...GCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CCA 90 bp CCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTTCGGCCACGGCTGCCTaGCCTCTGCCATGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: PGREREGNRLVIGWAWPSSATAA*PLPCQA
Trigger: GGCCTGGCATGGCAGAGGCCAGGCAGCCGTGGCCGA...AGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CCA 90 bp GCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCTGGCCCGTCTCGTTATTGGTTaGGCATGGCCATCTGCACAG +
Preference number: 2 (lower is better)
Translates to: AFSHSRRPRCPLGHGCLARLVIG*AWPSAQ
Trigger: CTGTGCAGATGGCCATGCCCAACCAATAACGAGACG...GGCCAGGCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR TCA 90 bp TGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTCTCGCCTCCACGCTCTaGTTGGAGAAGAGGCAACTC +
Preference number: 2 (lower is better)
Translates to: WKLPSATADGHAVHSATALASTL*LEKRQL
Trigger: GAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAG...AGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCA
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR TCA 90 bp ACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCGTAAGGTGGGGAATCTaGTCAGGGCAGGGAGAAGAG +
Preference number: 2 (lower is better)
Translates to: TAAWPLPCQALEVAQLASVRWGI*SGQGEE
Trigger: CTCTTCTCCCTGCCCTGATCAGATTCCCCACCTTAC...GGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CCA 90 bp GAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCGGGCTCTGTATGTGGTaGGGTGAGATTGGAACCCAG +
Preference number: 2 (lower is better)
Translates to: EAAFSHSRRPRCPLGHGCGLCMW*GEIGTQ
Trigger: CTGGGTTCCAATCTCACCCCACCACATACAGAGCCC...GCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR TCA 90 bp GGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCAGCCATGCCAGGCCCTTaGAGTCGCCCAACTCGCCTC +
Preference number: 2 (lower is better)
Translates to: GREREGNRLVIGWAWPSAAMPGP*SRPTRL
Trigger: GAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGC...TGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR TCA 90 bp CTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGGCCATGCCAGGCCCTTaGAGTCGCCCAACTCGCCTC +
Preference number: 2 (lower is better)
Translates to: LAGKGRGTVSLLVGHGHLAMPGP*SRPTRL
Trigger: GAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGC...CAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CCA 90 bp GAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCTTGGAACCCAGTCTCTaGTTGGCGTGGCTGAGTGAA +
Preference number: 2 (lower is better)
Translates to: EAAFSHSRRPRCPLGHGCLEPSL*LAWLSE
Trigger: TTCACTCAGCCACGCCAACCAGAGACTGGGTTCCAA...GCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR CAA 90 bp TTCGGCCGTGTTTCTGCAAGCTGGCCCCTCCACCACTCTGCACTTTaGCTTCCTTGCCCATCTGAGATGGGCAGCCGGCCTCGACCATCC +
Preference number: 2 (lower is better)
Translates to: FGRVSASWPLHHSAL*LPCPSEMGSRPRPS
Trigger: GGATGGTCGAGGCCGGCTGCCCATCTCAGATGGGCAAGGAAGCAAAAGTGCAGAGTGGTGGAGGGGCCAGCTTGCAGAAACACGGCCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR-3UTR GCA 90 bp ACGGCCTCTTGCCGGTTGCCCTGGGCTGCTGTTGATTTCTGGCTCTCCAGGTCCGTGAGCTGTGGAAGCTaGCTTCAGCCACAGCAGACG +
Preference number: 2 (lower is better)
Translates to: TASCRLPWAAVDFWLSRSVSCGS*LQPQQT
Trigger: CGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCAC...GGACCTGGAGAGCCAGAAATCAACAGCAGCCCAGGGCAACCGGCAAGAGGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428570.1
3UTR-3UTR GCA 90 bp ACAGATATCAGTGGCATGGAGGGTTGGAGACGAGGGCTAGGAGCCTCCTGTGCTGCCTCCTTGGCTGCGTaGCTCGGGCCAGTGCACAAC +
Preference number: 2 (lower is better)
Translates to: TDISGMEGWRRGLGASCAASLAA*LGPVHN
Trigger: GTTGTGCACTGGCCCGAGGCACGCAGCCAAGGAGGC...AGCACAGGAGGCTCCTAGCCCTCGTCTCCAACCCTCCATGCCACTGATATCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR-3UTR CCA 90 bp GAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCCTCCACGCTCTGATTaGAGAAGAGGCAACTCCTTT +
Preference number: 2 (lower is better)
Translates to: EAAFSHSRRPRCPLGHGCPPRSD*RRGNSF
Trigger: AAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGG...GCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CCA 90 bp TGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGGAACCGTCTCGTTATTaGTTGGGCATGGCCATCTGC +
Preference number: 2 (lower is better)
Translates to: CGSCLQPQQTATLSTRPREPSRY*LGMAIC
Trigger: GCAGATGGCCATGCCCAACCAATAACGAGACGGTTC...CCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CCA 90 bp TCGGCCACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCGCTGCTGTTGATTTCTaGCTCTCCAGGTCCTGGATA +
Preference number: 2 (lower is better)
Translates to: SATAAWPLPCQALEVAQLAAVDF*LSRSWI
Trigger: TATCCAGGACCTGGAGAGCCAGAAATCAACAGCAGC...GAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGTGGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428570.1
3UTR-3UTR TCA 90 bp TGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTAAGGTGGGGAGTTGGCGTGGCTGAGTaGAGGTGTAAAGACATGAGC +
Preference number: 2 (lower is better)
Translates to: WLGMAICTGSCRARVRWGVGVAE*RCKDMS
Trigger: GCTCATGTCTTTACACCTTCACTCAGCCACGCCAAC...TCCCCACCTTACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR GCA 90 bp TCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTATTGGGCATGGCCATCTaGACAGGCTCCTGTAGGGCC +
Preference number: 2 (lower is better)
Translates to: SRYWLGMAICTGSCRARVLGMAI*TGSCRA
Trigger: GGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAA...TACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR GCA 90 bp CCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTCGGCCTCTTGCCGGTTaGCCTGGGCTGCTGTTGATT +
Preference number: 2 (lower is better)
Translates to: PGREREGNRLVIGWAWPSRPLAG*PGLLLI
Trigger: AATCAACAGCAGCCCAGGGCAACCGGCAAGAGGCCG...AGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428570.1
3UTR-3UTR CCA 90 bp GATCCTCAGTGCACCCCGCCCCATGCCTCAGTGCAGCGTCATCTTCGTGGGCTCCGTCTCGTTATTGGTTaGGCATGGCCATCTGCACAG +
Preference number: 2 (lower is better)
Translates to: DPQCTPPHASVQRHLRGLRLVIG*AWPSAQ
Trigger: CTGTGCAGATGGCCATGCCCAACCAATAACGAGACG...GAGCCCACGAAGATGACGCTGCACTGAGGCATGGGGCGGGGTGCACTGAGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR-3UTR CCA 90 bp AGAGGAGTGAGCTGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCTCTTGCCGGTTGCCCTaGGCTGCTGTTGATTTCTGG +
Preference number: 2 (lower is better)
Translates to: RGVSCGSCLQPQQTATLSSCRLP*AAVDFW
Trigger: CCAGAAATCAACAGCAGCCCAGGGCAACCGGCAAGA...GGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACTCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428570.1
3UTR CAA 90 bp GCGCACGTGTGTGGTAACCTGCTGCCAGCCTCCTCTGTCTGGTGTTaGGTGGTGTGTTTGGCCGTCTTCGTAACCATAGGGCTGGAAGCC +
Preference number: 2 (lower is better)
Translates to: AHVCGNLLPASSVWC*VVCLAVFVTIGLEA
Trigger: GGCTTCCAGCCCTATGGTTACGAAGACGGCCAAACACACCACCAAACACCAGACAGAGGAGGCTGGCAGCAGGTTACCACACACGTGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR CAA 90 bp TCAGTATTAGGTGCTGCCCTTGACATCTGGCAAAGCCAGAAGGCCTaGGCAGGCCTGCCTGTGAGCTCCCCTTCTCCCCTTTCACTCCGC +
Preference number: 2 (lower is better)
Translates to: SVLGAALDIWQSQKA*AGLPVSSPSPLSLR
Trigger: GCGGAGTGAAAGGGGAGAAGGGGAGCTCACAGGCAGGCCTGCCAAGGCCTTCTGGCTTTGCCAGATGTCAAGGGCAGCACCTAATACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR CAA 90 bp AGGGTAACTTTGTGGCAGGGCCACAGATATCAGTGGCATGGAGGGTaGGAGACGAGGGCTAGGAGCCTCCTGTGCTGGAAAGAGCCCTGG +
Preference number: 2 (lower is better)
Translates to: RVTLWQGHRYQWHGG*ETRARSLLCWKEPW
Trigger: CCAGGGCTCTTTCCAGCACAGGAGGCTCCTAGCCCTCGTCTCCAACCCTCCATGCCACTGATATCTGTGGCCCTGCCACAAAGTTACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR-3UTR TCA 90 bp GGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACTCGCCTCCACGCTCTaGTTGGAGAAGAGGCAACTC +
Preference number: 2 (lower is better)
Translates to: GREREGNRLVIGWAWPSALASTL*LEKRQL
Trigger: GAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAG...TGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR TCA 90 bp GCTAGGAGCCTCCTGTGCTGGAAAGAGCCCTGGGCTAGGATCAGGGCCGGGTTCATTAGGTGCTGCCCTTaGCATCTGGCAAAGCCAGAA +
Preference number: 2 (lower is better)
Translates to: ARSLLCWKEPWARIRAGFIRCCP*HLAKPE
Trigger: TTCTGGCTTTGCCAGATGTCAAGGGCAGCACCTAAT...GAACCCGGCCCTGATCCTAGCCCAGGGCTCTTTCCAGCACAGGAGGCTCCTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR-3UTR GCA 90 bp GGTGGGGTGAGATTGGAACCCAGTCTCTGGTTGGCGTGGCTGAGTGAAGGTGTATTGGGCATGGCCATCTaGACAGGCTCCTGTAGGGCC +
Preference number: 2 (lower is better)
Translates to: GGVRLEPSLWLAWLSEGVLGMAI*TGSCRA
Trigger: GGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAA...TACACCTTCACTCAGCCACGCCAACCAGAGACTGGGTTCCAATCTCACCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR GCA 90 bp TGTTTCTGCAAGCTGGCCCCTCCACCACTCTGCACTTTTGCTTCCTTGCCCATCCCAAAGCTGCCTTCCTaGAGCCCTGGCTGCTCGCTC +
Preference number: 2 (lower is better)
Translates to: CFCKLAPPPLCTFASLPIPKLPS*SPGCSL
Trigger: GAGCGAGCAGCCAGGGCTGCAGGAAGGCAGCTTTGG...GATGGGCAAGGAAGCAAAAGTGCAGAGTGGTGGAGGGGCCAGCTTGCAGAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR-3UTR CCA 90 bp TGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTAAGGTGGGGACCTCCACGCTCTGATTaGAGAAGAGGCAACTCCTTT +
Preference number: 2 (lower is better)
Translates to: WLGMAICTGSCRARVRWGPPRSD*RRGNSF
Trigger: AAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGG...TCCCCACCTTACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CCA 90 bp AGAGGAGTGAGCTGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCGTTATTGGTTGGGCATaGCCATCTGCACAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: RGVSCGSCLQPQQTATLSVIGWA*PSAQAP
Trigger: AGGAGCCTGTGCAGATGGCCATGCCCAACCAATAAC...GGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACTCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CCA 90 bp TCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTATGGCTCTCCAGGTCCTaGATAGTGTCAGGGAGCGGA +
Preference number: 2 (lower is better)
Translates to: SRYWLGMAICTGSCRARVWLSRS*IVSGSG
Trigger: TCCGCTCCCTGACACTATCCAGGACCTGGAGAGCCA...TACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428570.1
3UTR-3UTR TCA 90 bp CCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGTAAGGTGGGGAATCTaGTCAGGGCAGGGAGAAGAG +
Preference number: 2 (lower is better)
Translates to: PGREREGNRLVIGWAWPSVRWGI*SGQGEE
Trigger: CTCTTCTCCCTGCCCTGATCAGATTCCCCACCTTAC...AGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR TCA 90 bp GGTGGGGTGAGATTGGAACCCAGTCTCTGGTTGGCGTGGCTGAGTGAAGGTGTAGTAAGGTGGGGAATCTaGTCAGGGCAGGGAGAAGAG +
Preference number: 2 (lower is better)
Translates to: GGVRLEPSLWLAWLSEGVVRWGI*SGQGEE
Trigger: CTCTTCTCCCTGCCCTGATCAGATTCCCCACCTTAC...TACACCTTCACTCAGCCACGCCAACCAGAGACTGGGTTCCAATCTCACCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR TCA 90 bp AGAGGAGTGAGCTGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCTTCTCATTTCACAGATaGGGGCTCTGTATGTGGTGG +
Preference number: 2 (lower is better)
Translates to: RGVSCGSCLQPQQTATLSFSFHR*GLCMWW
Trigger: CCACCACATACAGAGCCCTCATCTGTGAAATGAGAA...GGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CCA 90 bp CCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTAAGAGGAGTGAGCTGTaGAAGCTGCCTTCAGCCACA +
Preference number: 2 (lower is better)
Translates to: PGREREGNRLVIGWAWPSKRSEL*KLPSAT
Trigger: TGTGGCTGAAGGCAGCTTCCACAGCTCACTCCTCTT...AGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CCA 90 bp GGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGAAGAGGAGTGAGCTGTaGAAGCTGCCTTCAGCCACA +
Preference number: 2 (lower is better)
Translates to: GNRLVIGWAWPSAQAPVGKRSEL*KLPSAT
Trigger: TGTGGCTGAAGGCAGCTTCCACAGCTCACTCCTCTT...CCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CCA 90 bp CCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGTTATTGGTTGGGCATaGCCATCTGCACAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: PGREREGNRLVIGWAWPSVIGWA*PSAQAP
Trigger: AGGAGCCTGTGCAGATGGCCATGCCCAACCAATAAC...AGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CCA 90 bp CCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGAACCGTCTCGTTATTaGTTGGGCATGGCCATCTGC +
Preference number: 2 (lower is better)
Translates to: PGREREGNRLVIGWAWPSEPSRY*LGMAIC
Trigger: GCAGATGGCCATGCCCAACCAATAACGAGACGGTTC...AGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CCA 90 bp TCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTATTGGAACCCAGTCTCTaGTTGGCGTGGCTGAGTGAA +
Preference number: 2 (lower is better)
Translates to: SRYWLGMAICTGSCRARVLEPSL*LAWLSE
Trigger: TTCACTCAGCCACGCCAACCAGAGACTGGGTTCCAA...TACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CCA 90 bp GTAGGTGGATTTGGGAGCTGTGAGGAGGCAGGAGTGATTGACCCAGTGTACACAAGGAGCCTCCTGTGCTaGAAAGAGCCCTGGGCTAGG +
Preference number: 2 (lower is better)
Translates to: VGGFGSCEEAGVIDPVYTRSLLC*KEPWAR
Trigger: CCTAGCCCAGGGCTCTTTCCAGCACAGGAGGCTCCT...TGTGTACACTGGGTCAATCACTCCTGCCTCCTCACAGCTCCCAAATCCACCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR-3UTR TCA 90 bp AGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGTTGGCGTGGCTGAGTaGAGGTGTAAAGACATGAGC +
Preference number: 2 (lower is better)
Translates to: REREGNRLVIGWAWPSAQVGVAE*RCKDMS
Trigger: GCTCATGTCTTTACACCTTCACTCAGCCACGCCAAC...CTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR GCA 90 bp AAGGGCATGAGGGTAACTTTGTGGCAGGGCCACAGATATCAGTGGCATGGAGGGACGTGTGTGGTAACCTaGTGCCAGCCTCCTCTGTCT +
Preference number: 2 (lower is better)
Translates to: KGMRVTLWQGHRYQWHGGTCVVT*CQPPLS
Trigger: AGACAGAGGAGGCTGGCAGCAGGTTACCACACACGT...CCCTCCATGCCACTGATATCTGTGGCCCTGCCACAAAGTTACCCTCATGCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR-3UTR CCA 90 bp ACAGATATCAGTGGCATGGAGGGTTGGAGACGAGGGCTAGGAGCCTCCTGTGCTGTTATTGGTTGGGCATaGCCATCTGCACAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: TDISGMEGWRRGLGASCAVIGWA*PSAQAP
Trigger: AGGAGCCTGTGCAGATGGCCATGCCCAACCAATAAC...AGCACAGGAGGCTCCTAGCCCTCGTCTCCAACCCTCCATGCCACTGATATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR-3UTR CCA 90 bp AGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGTTGGAACCCAGTCTCTaGTTGGCGTGGCTGAGTGAA +
Preference number: 2 (lower is better)
Translates to: REREGNRLVIGWAWPSAQLEPSL*LAWLSE
Trigger: TTCACTCAGCCACGCCAACCAGAGACTGGGTTCCAA...CTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CCA 90 bp TGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTAAGGTGGGGACAGGTTCCATTTATTTaGCCGGTGCTAAGATCAGTT +
Preference number: 2 (lower is better)
Translates to: WLGMAICTGSCRARVRWGQVPFI*PVLRSV
Trigger: AACTGATCTTAGCACCGGCCAAATAAATGGAACCTG...TCCCCACCTTACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR TCA 90 bp TGTTTCTGCAAGCTGGCCCCTCCACCACTCTGCACTTTTGCTTCCTTGCCCATCAGGGAGGTCTGGGCATaGATCAAGAAAAGGTGTCCC +
Preference number: 2 (lower is better)
Translates to: CFCKLAPPPLCTFASLPIREVWA*IKKRCP
Trigger: GGGACACCTTTTCTTGATTCATGCCCAGACCTCCCT...GATGGGCAAGGAAGCAAAAGTGCAGAGTGGTGGAGGGGCCAGCTTGCAGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR-3UTR CCA 90 bp AGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGCCTCCACGCTCTGATTaGAGAAGAGGCAACTCCTTT +
Preference number: 2 (lower is better)
Translates to: REREGNRLVIGWAWPSAQPPRSD*RRGNSF
Trigger: AAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGG...CTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CCA 90 bp GGTGGGGTGAGATTGGAACCCAGTCTCTGGTTGGCGTGGCTGAGTGAAGGTGTACCTCCACGCTCTGATTaGAGAAGAGGCAACTCCTTT +
Preference number: 2 (lower is better)
Translates to: GGVRLEPSLWLAWLSEGVPPRSD*RRGNSF
Trigger: AAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGG...TACACCTTCACTCAGCCACGCCAACCAGAGACTGGGTTCCAATCTCACCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR TCA 90 bp CTGGCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACTCGCCTCCACGCTCTaGTTGGAGAAGAGGCAACTC +
Preference number: 2 (lower is better)
Translates to: LAALSAGSIYLAGAKISSLASTL*LEKRQL
Trigger: GAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAG...TGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CCA 90 bp ACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCCTTTCCAGGAGTCTTTGCGTCTCGTTATTGGTTaGGCATGGCCATCTGCACAG +
Preference number: 2 (lower is better)
Translates to: TRLHALIGEEATPFQESLRLVIG*AWPSAQ
Trigger: CTGTGCAGATGGCCATGCCCAACCAATAACGAGACG...CAAAGACTCCTGGAAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CCA 90 bp ACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCCTTTCCAGGAGTCTTTGGAACCGTCTCGTTATTaGTTGGGCATGGCCATCTGC +
Preference number: 2 (lower is better)
Translates to: TRLHALIGEEATPFQESLEPSRY*LGMAIC
Trigger: GCAGATGGCCATGCCCAACCAATAACGAGACGGTTC...CAAAGACTCCTGGAAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR TCA 90 bp CTGGCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCAGTAAGGTGGGGAATCTaGTCAGGGCAGGGAGAAGAG +
Preference number: 2 (lower is better)
Translates to: LAALSAGSIYLAGAKISSVRWGI*SGQGEE
Trigger: CTCTTCTCCCTGCCCTGATCAGATTCCCCACCTTAC...TGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR GCA 90 bp ATTGTGAGCCACTGGAGGGCTTTCAGCAGGGAGGGATTTGGTTTGGATTGCGTTGCACTTTTGCTTCCTTaGCCATCTGAGATGGGCAGC +
Preference number: 2 (lower is better)
Translates to: IVSHWRAFSREGFGLDCVALLLP*PSEMGS
Trigger: GCTGCCCATCTCAGATGGGCAAGGAAGCAAAAGTGC...AACGCAATCCAAACCAAATCCCTCCCTGCTGAAAGCCCTCCAGTGGCTCACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR-3UTR CCA 90 bp GGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCAGGTTCCATTTATTTaGCCGGTGCTAAGATCAGTT +
Preference number: 2 (lower is better)
Translates to: GNRLVIGWAWPSAQAPVGQVPFI*PVLRSV
Trigger: AACTGATCTTAGCACCGGCCAAATAAATGGAACCTG...CCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CCA 90 bp GTAGGTGGATTTGGGAGCTGTGAGGAGGCAGGAGTGATTGACCCAGTGTACACAATCCCAGAGTTTTCATaGCCTGGACAAGGGAGGTCT +
Preference number: 2 (lower is better)
Translates to: VGGFGSCEEAGVIDPVYTIPEFS*PGQGRS
Trigger: AGACCTCCCTTGTCCAGGCCATGAAAACTCTGGGAT...TGTGTACACTGGGTCAATCACTCCTGCCTCCTCACAGCTCCCAAATCCACCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR-3UTR TCA 90 bp CTGGCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCAGTTGGCGTGGCTGAGTaGAGGTGTAAAGACATGAGC +
Preference number: 2 (lower is better)
Translates to: LAALSAGSIYLAGAKISSVGVAE*RCKDMS
Trigger: GCTCATGTCTTTACACCTTCACTCAGCCACGCCAAC...TGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CCA 90 bp CTGGCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACGTCTCGTTATTGGTTaGGCATGGCCATCTGCACAG +
Preference number: 2 (lower is better)
Translates to: LAALSAGSIYLAGAKISSRLVIG*AWPSAQ
Trigger: CTGTGCAGATGGCCATGCCCAACCAATAACGAGACG...TGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CCA 90 bp TCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCTGATACCGGGCTCTGTATGTGGTaGGGTGAGATTGGAACCCAG +
Preference number: 2 (lower is better)
Translates to: SQQVPFIWPVLRSVHPDTGLCMW*GEIGTQ
Trigger: CTGGGTTCCAATCTCACCCCACCACATACAGAGCCC...GGTATCAGGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR CAA 90 bp TGTGAGCCACTGGAGGGCTTTCAGCAGGGAGGGATTTGGTTTGGATaGCGTTTCTTAATAAGCATGGTGGCTGTTGTGCAGAGTGCAATG +
Preference number: 2 (lower is better)
Translates to: CEPLEGFQQGGIWFG*RFLISMVAVVQSAM
Trigger: CATTGCACTCTGCACAACAGCCACCATGCTTATTAAGAAACGCAATCCAAACCAAATCCCTCCCTGCTGAAAGCCCTCCAGTGGCTCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR-3UTR TCA 90 bp TCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCTGATACCGAAGGTGTAAAGACATaGGCCTGGCAGGGAAAGGGA +
Preference number: 2 (lower is better)
Translates to: SQQVPFIWPVLRSVHPDTEGVKT*AWQGKG
Trigger: TCCCTTTCCCTGCCAGGCTCATGTCTTTACACCTTC...GGTATCAGGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR TCA 90 bp GCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCTTCTCATTTCACAGATaGGGGCTCTGTATGTGGTGG +
Preference number: 2 (lower is better)
Translates to: AALSAGSIYLAGAKISSPFSFHR*GLCMWW
Trigger: CCACCACATACAGAGCCCTCATCTGTGAAATGAGAA...GGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CCA 90 bp TCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCTGATACCGTTATTGGTTGGGCATaGCCATCTGCACAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: SQQVPFIWPVLRSVHPDTVIGWA*PSAQAP
Trigger: AGGAGCCTGTGCAGATGGCCATGCCCAACCAATAAC...GGTATCAGGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CCA 90 bp TCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCTGATACCGAACCGTCTCGTTATTaGTTGGGCATGGCCATCTGC +
Preference number: 2 (lower is better)
Translates to: SQQVPFIWPVLRSVHPDTEPSRY*LGMAIC
Trigger: GCAGATGGCCATGCCCAACCAATAACGAGACGGTTC...GGTATCAGGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR TCA 90 bp CTGGCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCATTCTCATTTCACAGATaGGGGCTCTGTATGTGGTGG +
Preference number: 2 (lower is better)
Translates to: LAALSAGSIYLAGAKISSFSFHR*GLCMWW
Trigger: CCACCACATACAGAGCCCTCATCTGTGAAATGAGAA...TGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CAA 90 bp GCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCTGGCCACGGCCTCTTGCCGGTaGCCCTGGGCTGCTGTTGAT +
Preference number: 3 (lower is better)
Translates to: AFSHSRRPRCPLGHGCLATASCR*PWAAVD
Trigger: ATCAACAGCAGCCCAGGGCAACCGGCAAGAGGCCGT...GGCCAGGCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428570.1
3UTR CCA 72 bp GCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCTaGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAA +
Preference number: 3 (lower is better)
Translates to: ADGHAVHSATAA*PLPCQALEVAQ
Trigger: TTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CAA 90 bp GAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCAGCAGGGGCAGGGCTaGGCGGCTCATCAGGATCAG +
Preference number: 3 (lower is better)
Translates to: EAAFSHSRRPRCPLGHGCQQGQG*AAHQDQ
Trigger: CTGATCCTGATGAGCCGCCAAGCCCTGCCCCTGCTG...GCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428570.1
3UTR CCA 72 bp CCCCCTTTGTGCTCCAAAGCTGCCTTCCTGCAGCCCTaGCTGCTCGCTCGGATCCTCAGTGCACCCCGCCCC +
Preference number: 3 (lower is better)
Translates to: PPLCSKAAFLQP*LLARILSAPRP
Trigger: GGGGCGGGGTGCACTGAGGATCCGAGCGAGCAGCCAGGGCTGCAGGAAGGCAGCTTTGGAGCACAAAGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR TCA 72 bp GGCCACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTaGAGTCGCCCAACTCGCCTCCACGCTCTGATTGGA +
Preference number: 3 (lower is better)
Translates to: GHGCLASAMPGP*SRPTRLHALIG
Trigger: TCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CAA 90 bp TGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGTGCCATGCCAGGCCCTaGAAGTCGCCCAACTCGCCT +
Preference number: 3 (lower is better)
Translates to: CGSCLQPQQTATLSTRPRCHARP*KSPNSP
Trigger: AGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCA...CCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR GCA 72 bp GCTCGGATCCTCAGTGCACCCCGCCCCATGCCTCAGTaGAGCGTCATCTTCGTGGGCTCTGCGCACGTGTGT +
Preference number: 3 (lower is better)
Translates to: ARILSAPRPMPQ*SVIFVGSAHVC
Trigger: ACACACGTGCGCAGAGCCCACGAAGATGACGCTGCACTGAGGCATGGGGCGGGGTGCACTGAGGATCCGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR GCA 72 bp GCCAGGAGTTGCCCCACCCCCTTTGTGCTCCAAAGCTaGCTTCCTGCAGCCCTGGCTGCTCGCTCGGATCCT +
Preference number: 3 (lower is better)
Translates to: ARSCPTPFVLQS*LPAALAARSDP
Trigger: AGGATCCGAGCGAGCAGCCAGGGCTGCAGGAAGGCAGCTTTGGAGCACAAAGGGGGTGGGGCAACTCCTGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR CCA 72 bp GGAGGGTTGGAGACGAGGGCTAGGAGCCTCCTGTGCTaGAAAGAGCCCTGGGCTAGGATCAGGGCCGGGTTC +
Preference number: 3 (lower is better)
Translates to: GGLETRARSLLC*KEPWARIRAGF
Trigger: GAACCCGGCCCTGATCCTAGCCCAGGGCTCTTTCCAGCACAGGAGGCTCCTAGCCCTCGTCTCCAACCCTCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR TCA 72 bp TCTGGCAAAGCCAGAAGGCCTTGGCAGGCCTGCCTGTaGGCTCCCCTTCTCCCCTTTCACTCCGCCCTGTGG +
Preference number: 3 (lower is better)
Translates to: SGKARRPWQACL*APLLPFHSALW
Trigger: CCACAGGGCGGAGTGAAAGGGGAGAAGGGGAGCTCACAGGCAGGCCTGCCAAGGCCTTCTGGCTTTGCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR GCA 72 bp TTGCCCCACCCCCTTTGTGCTCCAAAGCTGCCTTCCTaGAGCCCTGGCTGCTCGCTCGGATCCTCAGTGCAC +
Preference number: 3 (lower is better)
Translates to: LPHPLCAPKLPS*SPGCSLGSSVH
Trigger: GTGCACTGAGGATCCGAGCGAGCAGCCAGGGCTGCAGGAAGGCAGCTTTGGAGCACAAAGGGGGTGGGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR-3UTR CAA 90 bp TTGGCTGCGTGCCTCGGGCCAGTGCACAACCTGGACACCTGTATCTGGCAGCTCTGCCATGCCAGGCCCTaGAAGTCGCCCAACTCGCCT +
Preference number: 3 (lower is better)
Translates to: LAACLGPVHNLDTCIWQLCHARP*KSPNSP
Trigger: AGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCA...GAGCTGCCAGATACAGGTGTCCAGGTTGTGCACTGGCCCGAGGCACGCAGCCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR-3UTR CAA 90 bp GAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCGGAACCGTCTCGTTATaGGTTGGGCATGGCCATCTG +
Preference number: 3 (lower is better)
Translates to: EAAFSHSRRPRCPLGHGCGTVSL*VGHGHL
Trigger: CAGATGGCCATGCCCAACCAATAACGAGACGGTTCC...GCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR GCA 72 bp GCTGAGTTTCAGACCCCACACGCCTCCTTGGCTGCGTaGCTCGGGCCAGTGCACAACCTGGACACCTGTATC +
Preference number: 3 (lower is better)
Translates to: AEFQTPHASLAA*LGPVHNLDTCI
Trigger: GATACAGGTGTCCAGGTTGTGCACTGGCCCGAGGCACGCAGCCAAGGAGGCGTGTGGGGTCTGAAACTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR CCA 72 bp GGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTaGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCC +
Preference number: 3 (lower is better)
Translates to: GREREGNRLVIG*AWPSAQAPVGP
Trigger: GGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CAA 90 bp AGGAGCCTCCTGTGCTGGAAAGAGCCCTGGGCTAGGATCAGGGCCGGGTTCGGCCCTTTCCAGGAGTCTTaGACTAAAGGGGCTCCATGC +
Preference number: 3 (lower is better)
Translates to: RSLLCWKEPWARIRAGFGPFQES*TKGAPC
Trigger: GCATGGAGCCCCTTTAGTCAAAGACTCCTGGAAAGG...GCCGAACCCGGCCCTGATCCTAGCCCAGGGCTCTTTCCAGCACAGGAGGCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR-3UTR CAA 90 bp TCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTATGCCATGCCAGGCCCTaGAAGTCGCCCAACTCGCCT +
Preference number: 3 (lower is better)
Translates to: SRYWLGMAICTGSCRARVCHARP*KSPNSP
Trigger: AGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCA...TACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CAA 90 bp TGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCTGCCATGCCAGGCCCTaGAAGTCGCCCAACTCGCCT +
Preference number: 3 (lower is better)
Translates to: WQGKGGEPSRYWLGMAICCHARP*KSPNSP
Trigger: AGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCA...GCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CAA 90 bp CCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTTGCCATGCCAGGCCCTaGAAGTCGCCCAACTCGCCT +
Preference number: 3 (lower is better)
Translates to: PGREREGNRLVIGWAWPSCHARP*KSPNSP
Trigger: AGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCA...AGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR CCA 72 bp GCCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTaGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGG +
Preference number: 3 (lower is better)
Translates to: AWQGKGGEPSRY*LGMAICTGSCR
Trigger: CCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR CCA 72 bp AGGATCAGGGCCGGGTTCGGCCGTGTTTCTGCAAGCTaGCCCCTCCACCACTCTGCACTTTTGCTTCCTTGC +
Preference number: 3 (lower is better)
Translates to: RIRAGFGRVSAS*PLHHSALLLPC
Trigger: GCAAGGAAGCAAAAGTGCAGAGTGGTGGAGGGGCCAGCTTGCAGAAACACGGCCGAACCCGGCCCTGATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR-3UTR CAA 90 bp AGAGGAGTGAGCTGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCCCGTCTCGTTATTGGTaGGGCATGGCCATCTGCACA +
Preference number: 3 (lower is better)
Translates to: RGVSCGSCLQPQQTATLSPSRYW*GMAICT
Trigger: TGTGCAGATGGCCATGCCCAACCAATAACGAGACGG...GGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR GCA 72 bp TTTCTGCAAGCTGGCCCCTCCACCACTCTGCACTTTTaGTTCCTTGCCCATCTGAGATGGGCAGCCGGCCTC +
Preference number: 3 (lower is better)
Translates to: FLQAGPSTTLHF*FLAHLRWAAGL
Trigger: GAGGCCGGCTGCCCATCTCAGATGGGCAAGGAAGCAAAAGTGCAGAGTGGTGGAGGGGCCAGCTTGCAGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR CCA 72 bp TGTGGCAGGGCCACAGATATCAGTGGCATGGAGGGTTaGAGACGAGGGCTAGGAGCCTCCTGTGCTGGAAAG +
Preference number: 3 (lower is better)
Translates to: CGRATDISGMEG*RRGLGASCAGK
Trigger: CTTTCCAGCACAGGAGGCTCCTAGCCCTCGTCTCCAACCCTCCATGCCACTGATATCTGTGGCCCTGCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR CCA 72 bp GTACTTTCCACAGTGACGGCCTCTTGCCGGTTGCCCTaGGCTGCTGTTGATTTCTGGCTCTCCAGGTCCTGG +
Preference number: 3 (lower is better)
Translates to: VLSTVTASCRLP*AAVDFWLSRSW
Trigger: CCAGGACCTGGAGAGCCAGAAATCAACAGCAGCCCAGGGCAACCGGCAAGAGGCCGTCACTGTGGAAAGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428570.1
3UTR-3UTR CAA 90 bp TGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCGAACCCAGTCTCTGGTaGGCGTGGCTGAGTGAAGGT +
Preference number: 3 (lower is better)
Translates to: WQGKGGEPSRYWLGMAICEPSLW*AWLSEG
Trigger: ACCTTCACTCAGCCACGCCAACCAGAGACTGGGTTC...GCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CAA 90 bp GGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGGAACCCAGTCTCTGGTaGGCGTGGCTGAGTGAAGGT +
Preference number: 3 (lower is better)
Translates to: GNRLVIGWAWPSAQAPVGEPSLW*AWLSEG
Trigger: ACCTTCACTCAGCCACGCCAACCAGAGACTGGGTTC...CCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CAA 90 bp TCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTACCGTCTCGTTATTGGTaGGGCATGGCCATCTGCACA +
Preference number: 3 (lower is better)
Translates to: SRYWLGMAICTGSCRARVPSRYW*GMAICT
Trigger: TGTGCAGATGGCCATGCCCAACCAATAACGAGACGG...TACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CAA 90 bp TGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCGGAACCGTCTCGTTATaGGTTGGGCATGGCCATCTG +
Preference number: 3 (lower is better)
Translates to: WQGKGGEPSRYWLGMAICGTVSL*VGHGHL
Trigger: CAGATGGCCATGCCCAACCAATAACGAGACGGTTCC...GCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CAA 90 bp TGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCTGTGGTGGGGTGAGATaGGAACCCAGTCTCTGGTTG +
Preference number: 3 (lower is better)
Translates to: WQGKGGEPSRYWLGMAICCGGVR*EPSLWL
Trigger: CAACCAGAGACTGGGTTCCAATCTCACCCCACCACA...GCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CAA 90 bp TCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTATGTGGTGGGGTGAGATaGGAACCCAGTCTCTGGTTG +
Preference number: 3 (lower is better)
Translates to: SRYWLGMAICTGSCRARVCGGVR*EPSLWL
Trigger: CAACCAGAGACTGGGTTCCAATCTCACCCCACCACA...TACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CAA 90 bp GACATGAGCCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATTGCCCTGGGCTGCTGTaGATTTCTGGCTCTCCAGGT +
Preference number: 3 (lower is better)
Translates to: DMSLAGKGRGTVSLLVGHCPGLL*ISGSPG
Trigger: ACCTGGAGAGCCAGAAATCAACAGCAGCCCAGGGCA...ATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGGCTCATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428570.1
3UTR TCA 72 bp CTCTGGTTGGCGTGGCTGAGTGAAGGTGTAAAGACATaGGCCTGGCAGGGAAAGGGAGGGGAACCGTCTCGT +
Preference number: 3 (lower is better)
Translates to: LWLAWLSEGVKT*AWQGKGGEPSR
Trigger: ACGAGACGGTTCCCCTCCCTTTCCCTGCCAGGCTCATGTCTTTACACCTTCACTCAGCCACGCCAACCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR TCA 72 bp CCTCCACCACTCTGCACTTTTGCTTCCTTGCCCATCTaGGATGGGCAGCCGGCCTCGACCATCCCAGAGTTT +
Preference number: 3 (lower is better)
Translates to: PPPLCTFASLPI*DGQPASTIPEF
Trigger: AAACTCTGGGATGGTCGAGGCCGGCTGCCCATCTCAGATGGGCAAGGAAGCAAAAGTGCAGAGTGGTGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR TCA 72 bp GCAGGCACAATTTCTAGAGCGAGGTACTTTCCACAGTaGCGGCCTCTTGCCGGTTGCCCTGGGCTGCTGTTG +
Preference number: 3 (lower is better)
Translates to: AGTISRARYFPQ*RPLAGCPGLLL
Trigger: CAACAGCAGCCCAGGGCAACCGGCAAGAGGCCGTCACTGTGGAAAGTACCTCGCTCTAGAAATTGTGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428570.1
3UTR GCA 72 bp TCATCTTCGTGGGCTCTGCGCACGTGTGTGGTAACCTaGTGCCAGCCTCCTCTGTCTGGTGTTTGGTGGTGT +
Preference number: 3 (lower is better)
Translates to: SSSWALRTCVVT*CQPPLSGVWWC
Trigger: ACACCACCAAACACCAGACAGAGGAGGCTGGCAGCAGGTTACCACACACGTGCGCAGAGCCCACGAAGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR CCA 72 bp GTGGGGTCTCCAGGGAAGGGCATGAGGGTAACTTTGTaGCAGGGCCACAGATATCAGTGGCATGGAGGGTTG +
Preference number: 3 (lower is better)
Translates to: VGSPGKGMRVTL*QGHRYQWHGGL
Trigger: CAACCCTCCATGCCACTGATATCTGTGGCCCTGCCACAAAGTTACCCTCATGCCCTTCCCTGGAGACCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR-3UTR CAA 90 bp CTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCCTTTCCAGGAGTCTTaGACTAAAGGGGCTCCATGC +
Preference number: 3 (lower is better)
Translates to: LAGKGRGTVSLLVGHGHLPFQES*TKGAPC
Trigger: GCATGGAGCCCCTTTAGTCAAAGACTCCTGGAAAGG...CAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CAA 90 bp CATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGACCTTTCCAGGAGTCTTaGACTAAAGGGGCTCCATGC +
Preference number: 3 (lower is better)
Translates to: HARPLKSPNSPPRSDWRRPFQES*TKGAPC
Trigger: GCATGGAGCCCCTTTAGTCAAAGACTCCTGGAAAGG...TCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CAA 90 bp CCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTCCTTTCCAGGAGTCTTaGACTAAAGGGGCTCCATGC +
Preference number: 3 (lower is better)
Translates to: PGREREGNRLVIGWAWPSPFQES*TKGAPC
Trigger: GCATGGAGCCCCTTTAGTCAAAGACTCCTGGAAAGG...AGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CAA 90 bp GGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACCTTTCCAGGAGTCTTaGACTAAAGGGGCTCCATGC +
Preference number: 3 (lower is better)
Translates to: GREREGNRLVIGWAWPSAPFQES*TKGAPC
Trigger: GCATGGAGCCCCTTTAGTCAAAGACTCCTGGAAAGG...TGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CAA 90 bp GGTGGGGTGAGATTGGAACCCAGTCTCTGGTTGGCGTGGCTGAGTGAAGGTGTAGGAACCGTCTCGTTATaGGTTGGGCATGGCCATCTG +
Preference number: 3 (lower is better)
Translates to: GGVRLEPSLWLAWLSEGVGTVSL*VGHGHL
Trigger: CAGATGGCCATGCCCAACCAATAACGAGACGGTTCC...TACACCTTCACTCAGCCACGCCAACCAGAGACTGGGTTCCAATCTCACCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CAA 90 bp TCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCTGATACCCACAGTGACGGCCTCTaGCCGGTTGCCCTGGGCTGC +
Preference number: 3 (lower is better)
Translates to: SQQVPFIWPVLRSVHPDTHSDGL*PVALGC
Trigger: GCAGCCCAGGGCAACCGGCAAGAGGCCGTCACTGTG...GGTATCAGGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428570.1
3UTR TCA 72 bp CAGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTaGTTGGAGAAGAGGCAACTCCTTTCCAGGAGTCTT +
Preference number: 3 (lower is better)
Translates to: QALEVAQLASTL*LEKRQLLSRSL
Trigger: AAGACTCCTGGAAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR TCA 72 bp CCGTTTCTCGCCAGCCTGCAGCATGATGAAACAAGCTaGTTACACCTTCCCGCAGAAGCCAGGAGTTGCCCC +
Preference number: 3 (lower is better)
Translates to: PFLASLQHDETS*LHLPAEARSCP
Trigger: GGGGCAACTCCTGGCTTCTGCGGGAAGGTGTAATCAGCTTGTTTCATCATGCTGCAGGCTGGCGAGAAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR CCA 72 bp TGCCTCGGGCCAGTGCACAACCTGGACACCTGTATCTaGCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCG +
Preference number: 3 (lower is better)
Translates to: CLGPVHNLDTCI*QLSQQVPFIWP
Trigger: CGGCCAAATAAATGGAACCTGCTGAGAGAGCTGCCAGATACAGGTGTCCAGGTTGTGCACTGGCCCGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR CCA 72 bp CACGTGTGTGGTAACCTGCTGCCAGCCTCCTCTGTCTaGTGTTTGGTGGTGTGTTTGGCCGTCTTCGTAACC +
Preference number: 3 (lower is better)
Translates to: HVCGNLLPASSV*CLVVCLAVFVT
Trigger: GGTTACGAAGACGGCCAAACACACCACCAAACACCAGACAGAGGAGGCTGGCAGCAGGTTACCACACACGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR-3UTR CAA 90 bp AAGGGCATGAGGGTAACTTTGTGGCAGGGCCACAGATATCAGTGGCATGGAGGGGGAACCGTCTCGTTATaGGTTGGGCATGGCCATCTG +
Preference number: 3 (lower is better)
Translates to: KGMRVTLWQGHRYQWHGGGTVSL*VGHGHL
Trigger: CAGATGGCCATGCCCAACCAATAACGAGACGGTTCC...CCCTCCATGCCACTGATATCTGTGGCCCTGCCACAAAGTTACCCTCATGCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR TCA 72 bp GAGATTGGAACCCAGTCTCTGGTTGGCGTGGCTGAGTaGAGGTGTAAAGACATGAGCCTGGCAGGGAAAGGG +
Preference number: 3 (lower is better)
Translates to: EIGTQSLVGVAE*RCKDMSLAGKG
Trigger: CCCTTTCCCTGCCAGGCTCATGTCTTTACACCTTCACTCAGCCACGCCAACCAGAGACTGGGTTCCAATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR CCA 72 bp ACCACTCTGCACTTTTGCTTCCTTGCCCATCTGAGATaGGCAGCCGGCCTCGACCATCCCAGAGTTTTCATG +
Preference number: 3 (lower is better)
Translates to: TTLHFCFLAHLR*AAGLDHPRVFM
Trigger: CATGAAAACTCTGGGATGGTCGAGGCCGGCTGCCCATCTCAGATGGGCAAGGAAGCAAAAGTGCAGAGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR-3UTR CAA 90 bp TTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCCTTTCCGTCTCGTTATTGGTaGGGCATGGCCATCTGCACA +
Preference number: 3 (lower is better)
Translates to: LKSPNSPPRSDWRRGNSFPSRYW*GMAICT
Trigger: TGTGCAGATGGCCATGCCCAACCAATAACGAGACGG...AAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CAA 90 bp ACAGATATCAGTGGCATGGAGGGTTGGAGACGAGGGCTAGGAGCCTCCTGTGCTGCAGGTTCCATTTATTaGGCCGGTGCTAAGATCAGT +
Preference number: 3 (lower is better)
Translates to: TDISGMEGWRRGLGASCAAGSIY*AGAKIS
Trigger: ACTGATCTTAGCACCGGCCAAATAAATGGAACCTGC...AGCACAGGAGGCTCCTAGCCCTCGTCTCCAACCCTCCATGCCACTGATATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR TCA 72 bp AGCCGAAAGTTAAGGTTCAGTATTAGGTGCTGCCCTTaGCATCTGGCAAAGCCAGAAGGCCTTGGCAGGCCT +
Preference number: 3 (lower is better)
Translates to: SRKLRFSIRCCP*HLAKPEGLGRP
Trigger: AGGCCTGCCAAGGCCTTCTGGCTTTGCCAGATGTCAAGGGCAGCACCTAATACTGAACCTTAACTTTCGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR GCA 72 bp ATCCCTACGCTTGTAAGGCTCCGTTTCTCGCCAGCCTaGAGCATGATGAAACAAGCTGATTACACCTTCCCG +
Preference number: 3 (lower is better)
Translates to: IPTLVRLRFSPA*SMMKQADYTFP
Trigger: CGGGAAGGTGTAATCAGCTTGTTTCATCATGCTGCAGGCTGGCGAGAAACGGAGCCTTACAAGCGTAGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR-3UTR CAA 90 bp TCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCTGATACCCCGTCTCGTTATTGGTaGGGCATGGCCATCTGCACA +
Preference number: 3 (lower is better)
Translates to: SQQVPFIWPVLRSVHPDTPSRYW*GMAICT
Trigger: TGTGCAGATGGCCATGCCCAACCAATAACGAGACGG...GGTATCAGGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR-3UTR CAA 90 bp TCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCTGATACCGGAACCGTCTCGTTATaGGTTGGGCATGGCCATCTG +
Preference number: 3 (lower is better)
Translates to: SQQVPFIWPVLRSVHPDTGTVSL*VGHGHL
Trigger: CAGATGGCCATGCCCAACCAATAACGAGACGGTTCC...GGTATCAGGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR CCA 72 bp TGTATCTGGCAGCTCTCTCAGCAGGTTCCATTTATTTaGCCGGTGCTAAGATCAGTTCACCCTGATACCTGC +
Preference number: 3 (lower is better)
Translates to: CIWQLSQQVPFI*PVLRSVHPDTC
Trigger: GCAGGTATCAGGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGCCAGATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp GCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCTGGCCTGGCGAGGCCGGCCATaGCCTGGGAACCCGCCTGGA +
Preference number: 4 (lower is better)
Translates to: AFSHSRRPRCPLGHGCLAWRGRP*PGNPPG
Trigger: TCCAGGCGGGTTCCCAGGCCATGGCCGGCCTCGCCA...GGCCAGGCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp GCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCTGGCCCAGCGCCGCCTGGCCTaGGCTGAAGGCACATCCCAC +
Preference number: 4 (lower is better)
Translates to: AFSHSRRPRCPLGHGCLAQRRLA*AEGTSH
Trigger: GTGGGATGTGCCTTCAGCGCAGGCCAGGCGGCGCTG...GGCCAGGCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR TCA 90 bp TGCAGCCCTGGCTGCTCGCTCGGATCCTCAGTGCACCCCGCCCCATGCCTCAGTCCGCCTGGCCTGCGCTaGAGGCACATCCCACCACCG +
Preference number: 4 (lower is better)
Translates to: CSPGCSLGSSVHPAPCLSPPGLR*RHIPPP
Trigger: CGGTGGTGGGATGTGCCTTCAGCGCAGGCCAGGCGG...ACTGAGGCATGGGGCGGGGTGCACTGAGGATCCGAGCGAGCAGCCAGGGCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR TCA 90 bp GCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCTGGCCGCCATGCCAGGCCCTTaGAGTCGCCCAACTCGCCTC +
Preference number: 4 (lower is better)
Translates to: AFSHSRRPRCPLGHGCLAAMPGP*SRPTRL
Trigger: GAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGC...GGCCAGGCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp TGCAGCCCTGGCTGCTCGCTCGGATCCTCAGTGCACCCCGCCCCATGCCTCAGTCCGCCCAGCGCCGCCTaGCCTGCGCTGAAGGCACAT +
Preference number: 4 (lower is better)
Translates to: CSPGCSLGSSVHPAPCLSPPSAA*PALKAH
Trigger: ATGTGCCTTCAGCGCAGGCCAGGCGGCGCTGGGCGG...ACTGAGGCATGGGGCGGGGTGCACTGAGGATCCGAGCGAGCAGCCAGGGCTGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp TCGGCCACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCTCGGCCACGGCTGCCTaGCCTCTGCCATGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SATAAWPLPCQALEVAQLSATAA*PLPCQA
Trigger: GGCCTGGCATGGCAGAGGCCAGGCAGCCGTGGCCGA...GAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGTGGCCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp GCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCTGGCCGGCGGCCAAGGAAACTaGGCAAGAGGGCAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: AFSHSRRPRCPLGHGCLAGGQGN*ARGQWW
Trigger: CCACCACTGCCCTCTTGCTCAGTTTCCTTGGCCGCC...GGCCAGGCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp GCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCTGGCCTCACGGCCCAGGCTCTaGAGGTCGAAGACCAGCCCA +
Preference number: 4 (lower is better)
Translates to: AFSHSRRPRCPLGHGCLASRPRL*RSKTSP
Trigger: TGGGCTGGTCTTCGACCTGCAGAGCCTGGGCCGTGA...GGCCAGGCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp GCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCTGGCCACAGTGACGGCCTCTTaGCGGTTGCCCTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: AFSHSRRPRCPLGHGCLATVTAS*RLPWAA
Trigger: AGCAGCCCAGGGCAACCGGCAAGAGGCCGTCACTGT...GGCCAGGCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp GCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCTGGCCGCCTGGGATGGCGGCTaGGAAGTTCTCCAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: AFSHSRRPRCPLGHGCLAAWDGG*EVLQEH
Trigger: ATGCTCCTGGAGAACTTCTCAGCCGCCATCCCAGGC...GGCCAGGCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR TCA 90 bp GCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCTGGCCGCCCTGGGCTGCTGTTaGTTTCTGGCTCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: AFSHSRRPRCPLGHGCLAALGCC*FLALQV
Trigger: GACCTGGAGAGCCAGAAATCAACAGCAGCCCAGGGC...GGCCAGGCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp TCGGCCACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCTTGGGGCGAAGATGGTaGTGGTGCCCGCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: SATAAWPLPCQALEVAQLLGRRW*WCPPRP
Trigger: TGGCCGTGGCGGGCACCAGCACCATCTTCGCCCCAA...GAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGTGGCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp TCGGCCACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCGGGCGAAGATGGTGCTaGTGCCCGCCACGGCCAACT +
Preference number: 4 (lower is better)
Translates to: SATAAWPLPCQALEVAQLGRRWC*CPPRPT
Trigger: AGTTGGCCGTGGCGGGCACCAGCACCATCTTCGCCC...GAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGTGGCCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp ACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCGGGCGAAGATGGTGCTaGTGCCCGCCACGGCCAACT +
Preference number: 4 (lower is better)
Translates to: TAAWPLPCQALEVAQLASGRRWC*CPPRPT
Trigger: AGTTGGCCGTGGCGGGCACCAGCACCATCTTCGCCC...GGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp GCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCTGGCCACTGATGCTGCCAGCTaGAGAGTCCTCCAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: AFSHSRRPRCPLGHGCLATDAAS*RVLQSR
Trigger: GCGGGACTGGAGGACTCTCCAGCTGGCAGCATCAGT...GGCCAGGCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp GCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCTGGCCGCATGTTGGCTAGAATaGCGAGGCCGGCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: AFSHSRRPRCPLGHGCLAACWLE*RGRPWP
Trigger: AGGCCATGGCCGGCCTCGCCATTCTAGCCAACATGC...GGCCAGGCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGC
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp TGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTAAGGTGGGGATCGGCCACGGCTGCCTaGCCTCTGCCATGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: WLGMAICTGSCRARVRWGSATAA*PLPCQA
Trigger: GGCCTGGCATGGCAGAGGCCAGGCAGCCGTGGCCGA...TCCCCACCTTACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp GCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCTGGCCCTTGCCCATCTGAGATaGGCAGCCGGCCTCGACCAT +
Preference number: 4 (lower is better)
Translates to: AFSHSRRPRCPLGHGCLALAHLR*AAGLDH
Trigger: ATGGTCGAGGCCGGCTGCCCATCTCAGATGGGCAAG...GGCCAGGCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR CAA 72 bp CGGCCACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTaGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGG +
Preference number: 4 (lower is better)
Translates to: RPRLPGLCHARP*KSPNSPPRSDW
Trigger: CCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGTGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp AGTGAGCTGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGCCGCCTGGCCTGCGCTaGAGGCACATCCCACCACCG +
Preference number: 4 (lower is better)
Translates to: SELWKLPSATADGHAVHSPPGLR*RHIPPP
Trigger: CGGTGGTGGGATGTGCCTTCAGCGCAGGCCAGGCGG...CGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR TCA 90 bp ACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCTCCCGGGAAGCCCTGTaGTGCCTCGGGGAAACTCCT +
Preference number: 4 (lower is better)
Translates to: TAAWPLPCQALEVAQLASSREAL*CLGETP
Trigger: AGGAGTTTCCCCGAGGCATCACAGGGCTTCCCGGGA...GGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377585.7
CDS-3UTR GCA 90 bp ACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCCGAAGATGGTGCTGGTaGCCGCCACGGCCAACTGCA +
Preference number: 4 (lower is better)
Translates to: TAAWPLPCQALEVAQLASRRWCW*PPRPTA
Trigger: TGCAGTTGGCCGTGGCGGGCACCAGCACCATCTTCG...GGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR GCA 90 bp GAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCACAGTGACGGCCTCTTaGCGGTTGCCCTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: EAAFSHSRRPRCPLGHGCTVTAS*RLPWAA
Trigger: AGCAGCCCAGGGCAACCGGCAAGAGGCCGTCACTGT...GCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp GCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCTGGCCGCCCCTCCACCACTCTaGACTTTTGCTTCCTTGCCC +
Preference number: 4 (lower is better)
Translates to: AFSHSRRPRCPLGHGCLAAPPPL*TFASLP
Trigger: GGGCAAGGAAGCAAAAGTGCAGAGTGGTGGAGGGGC...GGCCAGGCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp TGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGAGCACCTGCAGGGTCTaGAAGAGGCCCACGCCTCCG +
Preference number: 4 (lower is better)
Translates to: CGSCLQPQQTATLSTRPRSTCRV*KRPTPP
Trigger: CGGAGGCGTGGGCCTCTTCCAGACCCTGCAGGTGCT...CCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp TCGGCCACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCAGGGGCTTCAAGCCCTaGGAGCTGCACACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: SATAAWPLPCQALEVAQLRGFKP*ELHTRS
Trigger: GGACCTGGTGTGCAGCTCCCAGGGCTTGAAGCCCCT...GAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGTGGCCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR TCA 90 bp TCGGCCACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCGCTTCGAGAACGCCATaGACAGAGCTGCCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: SATAAWPLPCQALEVAQLASRTP*TELPRL
Trigger: CAGCCGAGGCAGCTCTGTTCATGGCGTTCTCGAAGC...GAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGTGGCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR TCA 90 bp TGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGGCGGCCAAGGAAACTaGGCAAGAGGGCAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: WKLPSATADGHAVHSATAGGQGN*ARGQWW
Trigger: CCACCACTGCCCTCTTGCTCAGTTTCCTTGGCCGCC...AGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp GATCCTCAGTGCACCCCGCCCCATGCCTCAGTGCAGCGTCATCTTCGTGGGCTCGCCATGCCAGGCCCTTaGAGTCGCCCAACTCGCCTC +
Preference number: 4 (lower is better)
Translates to: DPQCTPPHASVQRHLRGLAMPGP*SRPTRL
Trigger: GAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGC...GAGCCCACGAAGATGACGCTGCACTGAGGCATGGGGCGGGGTGCACTGAGGATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR TCA 90 bp TGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTAAGGTGGGGAGCCATGCCAGGCCCTTaGAGTCGCCCAACTCGCCTC +
Preference number: 4 (lower is better)
Translates to: WLGMAICTGSCRARVRWGAMPGP*SRPTRL
Trigger: GAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGC...TCCCCACCTTACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp TGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTAAGGTGGGGAGCTTCCTTGCCCATCTaGGATGGGCAGCCGGCCTCG +
Preference number: 4 (lower is better)
Translates to: WLGMAICTGSCRARVRWGASLPI*DGQPAS
Trigger: CGAGGCCGGCTGCCCATCTCAGATGGGCAAGGAAGC...TCCCCACCTTACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR GCA 90 bp TCGGCCACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCTCAAGCCCTGGGAGCTaGACACCAGGTCCCACTTGG +
Preference number: 4 (lower is better)
Translates to: SATAAWPLPCQALEVAQLSSPGS*TPGPTW
Trigger: CCAAGTGGGACCTGGTGTGCAGCTCCCAGGGCTTGA...GAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGTGGCCGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR GCA 90 bp GAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCGGCCTCTTGCCGGTTaGCCTGGGCTGCTGTTGATT +
Preference number: 4 (lower is better)
Translates to: EAAFSHSRRPRCPLGHGCRPLAG*PGLLLI
Trigger: AATCAACAGCAGCCCAGGGCAACCGGCAAGAGGCCG...GCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp ACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCCGGCCTCTTGCCGGTTaGCCTGGGCTGCTGTTGATT +
Preference number: 4 (lower is better)
Translates to: TAAWPLPCQALEVAQLASRPLAG*PGLLLI
Trigger: AATCAACAGCAGCCCAGGGCAACCGGCAAGAGGCCG...GGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp TGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGACAGTGACGGCCTCTTaGCGGTTGCCCTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: CGSCLQPQQTATLSTRPRTVTAS*RLPWAA
Trigger: AGCAGCCCAGGGCAACCGGCAAGAGGCCGTCACTGT...CCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp TGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGGACCTTCTGCCTTCCTaGCCCTCAGCCGGATTGGGG +
Preference number: 4 (lower is better)
Translates to: CGSCLQPQQTATLSTRPRDLLPS*PSAGLG
Trigger: CCCCAATCCGGCTGAGGGGCAGGAAGGCAGAAGGTC...CCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377585.7
CDS-3UTR CCA 90 bp TGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGAGGGGCTTCAAGCCCTaGGAGCTGCACACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: CGSCLQPQQTATLSTRPRRGFKP*ELHTRS
Trigger: GGACCTGGTGTGCAGCTCCCAGGGCTTGAAGCCCCT...CCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp ACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCACTGATGCTGCCAGCTaGAGAGTCCTCCAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: TAAWPLPCQALEVAQLASTDAAS*RVLQSR
Trigger: GCGGGACTGGAGGACTCTCCAGCTGGCAGCATCAGT...GGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp TGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCCCGAAGAGGGCCTaGAGGAGGAAGATGTCACGG +
Preference number: 4 (lower is better)
Translates to: WKLPSATADGHAVHSATAAPKRA*RRKMSR
Trigger: CCGTGACATCTTCCTCCTCCAGGCCCTCTTCGGGGC...AGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp AGAGGAGTGAGCTGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCAGGCCGGCCATGGCCTaGGAACCCGCCTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: RGVSCGSCLQPQQTATLSRPAMA*EPAWMV
Trigger: CACCATCCAGGCGGGTTCCCAGGCCATGGCCGGCCT...GGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACTCCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp AGCAGGGGCAGGGCTTGGCGGCTCATCAGGATCAGGGGACCCATCATAGCCCCCGCGGCACCAGCATGTTaGCTAGAATGGCGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: SRGRAWRLIRIRGPIIAPAAPAC*LEWRGR
Trigger: CCGGCCTCGCCATTCTAGCCAACATGCTGGTGCCGC...GGGGGCTATGATGGGTCCCCTGATCCTGATGAGCCGCCAAGCCCTGCCCCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428570.1
CDS-3UTR CCA 90 bp TTGCCCCACCCCCTTTGTGCTCCAAAGCTGCCTTCCTGCAGCCCTGGCTGCTCGAAGGCTGGGGTCCCATaGCTGCCTGACCAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPHPLCAPKLPSCSPGCSKAGVP*LPDQAG
Trigger: CCCTGCCTGGTCAGGCAGCCATGGGACCCCAGCCTT...CGAGCAGCCAGGGCTGCAGGAAGGCAGCTTTGGAGCACAAAGGGGGTGGGGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp GAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCTCTTCACCACCAGCATaGCGCAGCTCCTCCAGCGGA +
Preference number: 4 (lower is better)
Translates to: EAAFSHSRRPRCPLGHGCSSPPA*RSSSSG
Trigger: TCCGCTGGAGGAGCTGCGCCATGCTGGTGGTGAAGA...GCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTC
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377585.7
CDS-3UTR TCA 90 bp GTGCCTCGGGCCAGTGCACAACCTGGACACCTGTATCTGGCAGCTCTCTCAGCACCACCACCGTCATGGTaGCCGCCCTCCTGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: VPRASAQPGHLYLAALSAPPPSW*PPSCWS
Trigger: CGACCAGCAGGAGGGCGGTCACCATGACGGTGGTGG...TGCTGAGAGAGCTGCCAGATACAGGTGTCCAGGTTGTGCACTGGCCCGAGGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR TCA 90 bp GAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCGGCAAAGAAGGGCACTaGTGCTGCCAGCTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: EAAFSHSRRPRCPLGHGCGKEGH*CCQLES
Trigger: ACTCTCCAGCTGGCAGCATCAGTGCCCTTCTTTGCC...GCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR TCA 90 bp GATCCTCAGTGCACCCCGCCCCATGCCTCAGTGCAGCGTCATCTTCGTGGGCTCGGCGGCCAAGGAAACTaGGCAAGAGGGCAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: DPQCTPPHASVQRHLRGLGGQGN*ARGQWW
Trigger: CCACCACTGCCCTCTTGCTCAGTTTCCTTGGCCGCC...GAGCCCACGAAGATGACGCTGCACTGAGGCATGGGGCGGGGTGCACTGAGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR TCA 90 bp TCGGCCACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCAGGTACTTTCCACAGTaGCGGCCTCTTGCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: SATAAWPLPCQALEVAQLRYFPQ*RPLAGC
Trigger: GCAACCGGCAAGAGGCCGTCACTGTGGAAAGTACCT...GAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGTGGCCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp TGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTAAGGTGGGGAGCTCTGCGGAGGGGGTaGAGGGGACTAAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: WLGMAICTGSCRARVRWGALRRG*RGLSSL
Trigger: CAGTGAGCTTAGTCCCCTTCACCCCCTCCGCAGAGC...TCCCCACCTTACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377585.7
CDS-3UTR GCA 90 bp GCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCTGGCCATGCAGAATGCCATCTaGTGTCATCCGCACTGGCGT +
Preference number: 4 (lower is better)
Translates to: AFSHSRRPRCPLGHGCLAMQNAI*CHPHWR
Trigger: ACGCCAGTGCGGATGACAGCAGATGGCATTCTGCAT...GGCCAGGCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR GCA 90 bp TGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGTTGGGCATGGCCATCTaGACAGGCTCCTGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: CGSCLQPQQTATLSTRPRLGMAI*TGSCRA
Trigger: GGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAA...CCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp AGTGAGCTGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCTCCTTGGCTGCGTaGCTCGGGCCAGTGCACAAC +
Preference number: 4 (lower is better)
Translates to: SELWKLPSATADGHAVHSASLAA*LGPVHN
Trigger: GTTGTGCACTGGCCCGAGGCACGCAGCCAAGGAGGC...CGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR GCA 90 bp TTGCCCCACCCCCTTTGTGCTCCAAAGCTGCCTTCCTGCAGCCCTGGCTGCTCGGTGCACCCCGCCCCATaGCTCAGTGCAGCGTCATCT +
Preference number: 4 (lower is better)
Translates to: LPHPLCAPKLPSCSPGCSVHPAP*LSAASS
Trigger: AGATGACGCTGCACTGAGGCATGGGGCGGGGTGCAC...CGAGCAGCCAGGGCTGCAGGAAGGCAGCTTTGGAGCACAAAGGGGGTGGGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp AGTGAGCTGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGAGCACCTGCAGGGTCTaGAAGAGGCCCACGCCTCCG +
Preference number: 4 (lower is better)
Translates to: SELWKLPSATADGHAVHSSTCRV*KRPTPP
Trigger: CGGAGGCGTGGGCCTCTTCCAGACCCTGCAGGTGCT...CGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp GCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCTGGCCGACATGAAGATGGACTaGCTTAGGGGCTTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: AFSHSRRPRCPLGHGCLADMKMD*LRGFKP
Trigger: GGGCTTGAAGCCCCTAAGCCAGTCCATCTTCATGTC...GGCCAGGCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp TGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCCCTCCTGCTGGTCGTaGTCCACTCCACCATCAGTG +
Preference number: 4 (lower is better)
Translates to: CGSCLQPQQTATLSTRPRPSCWS*STPPSV
Trigger: CACTGATGGTGGAGTGGACCACGACCAGCAGGAGGG...CCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp CTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCCGCCCAGCGCCGCCTaGCCTGCGCTGAAGGCACAT +
Preference number: 4 (lower is better)
Translates to: LAGKGRGTVSLLVGHGHLPPSAA*PALKAH
Trigger: ATGTGCCTTCAGCGCAGGCCAGGCGGCGCTGGGCGG...CAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp ACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCAATTCACCACCAGCATaGCGCAGCTCCTCCAGCGGA +
Preference number: 4 (lower is better)
Translates to: TAAWPLPCQALEVAQLASNSPPA*RSSSSG
Trigger: TCCGCTGGAGGAGCTGCGCCATGCTGGTGGTGAATT...GGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301891.9
ENST00000377581.7
CDS-3UTR CCA 90 bp CATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGCCTGGGAACCCGCCTaGATGGTGCGGCGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: HARPLKSPNSPPRSDWRRAWEPA*MVRRPR
Trigger: CCTTGGCCGCCGCACCATCCAGGCGGGTTCCCAGGC...TCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp GGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCAGCCTGGGAACCCGCCTaGATGGTGCGGCGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: GREREGNRLVIGWAWPSAAWEPA*MVRRPR
Trigger: CCTTGGCCGCCGCACCATCCAGGCGGGTTCCCAGGC...TGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp TGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCGCCTGGGAACCCGCCTaGATGGTGCGGCGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: WQGKGGEPSRYWLGMAICAWEPA*MVRRPR
Trigger: CCTTGGCCGCCGCACCATCCAGGCGGGTTCCCAGGC...GCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp ACCACTCTGCACTTTTGCTTCCTTGCCCATCTGAGATGGGCAGCCGGCCTCGACTGGCGAGGCCGGCCATaGCCTGGGAACCCGCCTGGA +
Preference number: 4 (lower is better)
Translates to: TTLHFCFLAHLRWAAGLDWRGRP*PGNPPG
Trigger: TCCAGGCGGGTTCCCAGGCCATGGCCGGCCTCGCCA...GTCGAGGCCGGCTGCCCATCTCAGATGGGCAAGGAAGCAAAAGTGCAGAGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp TCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTATGGCGAGGCCGGCCATaGCCTGGGAACCCGCCTGGA +
Preference number: 4 (lower is better)
Translates to: SRYWLGMAICTGSCRARVWRGRP*PGNPPG
Trigger: TCCAGGCGGGTTCCCAGGCCATGGCCGGCCTCGCCA...TACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp ATAGTGTCAGGGAGCGGAAGTCCCTGGGTCTCCGGGAGGAAGAACAGCACAACCTGGCGAGGCCGGCCATaGCCTGGGAACCCGCCTGGA +
Preference number: 4 (lower is better)
Translates to: IVSGSGSPWVSGRKNSTTWRGRP*PGNPPG
Trigger: TCCAGGCGGGTTCCCAGGCCATGGCCGGCCTCGCCA...GGTTGTGCTGTTCTTCCTCCCGGAGACCCAGGGACTTCCGCTCCCTGACACTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428570.1
CDS-3UTR CCA 90 bp TGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCTCGGCCACGGCTGCCTaGCCTCTGCCATGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: WQGKGGEPSRYWLGMAICSATAA*PLPCQA
Trigger: GGCCTGGCATGGCAGAGGCCAGGCAGCCGTGGCCGA...GCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp ATAGTGTCAGGGAGCGGAAGTCCCTGGGTCTCCGGGAGGAAGAACAGCACAACCTCGGCCACGGCTGCCTaGCCTCTGCCATGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: IVSGSGSPWVSGRKNSTTSATAA*PLPCQA
Trigger: GGCCTGGCATGGCAGAGGCCAGGCAGCCGTGGCCGA...GGTTGTGCTGTTCTTCCTCCCGGAGACCCAGGGACTTCCGCTCCCTGACACTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428570.1
CDS-3UTR CCA 90 bp TGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGAGTGGCATGGAGGGTTaGAGACGAGGGCTAGGAGCC +
Preference number: 4 (lower is better)
Translates to: CGSCLQPQQTATLSTRPRSGMEG*RRGLGA
Trigger: GGCTCCTAGCCCTCGTCTCCAACCCTCCATGCCACT...CCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR TCA 90 bp TGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTAAGGTGGGGAGCTTCGAGAACGCCATaGACAGAGCTGCCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: WLGMAICTGSCRARVRWGASRTP*TELPRL
Trigger: CAGCCGAGGCAGCTCTGTTCATGGCGTTCTCGAAGC...TCCCCACCTTACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR TCA 90 bp TGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCCAGGATCCCGGACATaGAGATGGACTGGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: CGSCLQPQQTATLSTRPRPGSRT*RWTGLG
Trigger: CCCTAAGCCAGTCCATCTTCATGTCCGGGATCCTGG...CCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR TCA 90 bp TGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCAGGCCGCAGTAGATaGCGAATGTTGGGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: WKLPSATADGHAVHSATAAGRSR*RMLGRR
Trigger: TCTTCGCCCCAACATTCGTCATCTACTGCGGCCTGC...AGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR TCA 90 bp CATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGACCACCACCGTCATGGTaGCCGCCCTCCTGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: HARPLKSPNSPPRSDWRRPPPSW*PPSCWS
Trigger: CGACCAGCAGGAGGGCGGTCACCATGACGGTGGTGG...TCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR TCA 90 bp AGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACCCACCACCGTCATGGTaGCCGCCCTCCTGCTGGTCG +
Preference number: 4 (lower is better)
Translates to: RPLKSPNSPPRSDWRRGNPPPSW*PPSCWS
Trigger: CGACCAGCAGGAGGGCGGTCACCATGACGGTGGTGG...GTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR TCA 90 bp GACATGAGCCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATCCGCCTGGCCTGCGCTaGAGGCACATCCCACCACCG +
Preference number: 4 (lower is better)
Translates to: DMSLAGKGRGTVSLLVGHPPGLR*RHIPPP
Trigger: CGGTGGTGGGATGTGCCTTCAGCGCAGGCCAGGCGG...ATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGGCTCATGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR TCA 90 bp TGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGGGCAAAGAAGGGCACTaGTGCTGCCAGCTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: CGSCLQPQQTATLSTRPRGKEGH*CCQLES
Trigger: ACTCTCCAGCTGGCAGCATCAGTGCCCTTCTTTGCC...CCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR TCA 90 bp TGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTAGGTACTTTCCACAGTaGCGGCCTCTTGCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: WKLPSATADGHAVHSATARYFPQ*RPLAGC
Trigger: GCAACCGGCAAGAGGCCGTCACTGTGGAAAGTACCT...AGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp TGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTAAGGTGGGGACCCACGCCTCCGGCTTaGTCCAAGAGCTTCGAGAAC +
Preference number: 4 (lower is better)
Translates to: WLGMAICTGSCRARVRWGPTPPA*SKSFEN
Trigger: GTTCTCGAAGCTCTTGGAGCAAGCCGGAGGCGTGGG...TCCCCACCTTACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR GCA 90 bp CCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTCCCGCCACGGCCAACTaGAGGCAGCACCAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PGREREGNRLVIGWAWPSPATAN*RQHQLS
Trigger: GCTGAGCTGGTGCTGCCTGCAGTTGGCCGTGGCGGG...AGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR GCA 90 bp GGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGCCACGGCCAACTaGAGGCAGCACCAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: GNRLVIGWAWPSAQAPVGPATAN*RQHQLS
Trigger: GCTGAGCTGGTGCTGCCTGCAGTTGGCCGTGGCGGG...CCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR GCA 90 bp AGTGAGCTGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGTCACGGCCCAGGCTCTaGAGGTCGAAGACCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SELWKLPSATADGHAVHSSRPRL*RSKTSP
Trigger: TGGGCTGGTCTTCGACCTGCAGAGCCTGGGCCGTGA...CGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp GTGCCTCGGGCCAGTGCACAACCTGGACACCTGTATCTGGCAGCTCTCTCAGCAACACGCCTCCTTGGCTaGGTGCCTCGGGCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: VPRASAQPGHLYLAALSATRLLG*VPRASA
Trigger: TGCACTGGCCCGAGGCACGCAGCCAAGGAGGCGTGT...TGCTGAGAGAGCTGCCAGATACAGGTGTCCAGGTTGTGCACTGGCCCGAGGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR GCA 90 bp TGCAGCCCTGGCTGCTCGCTCGGATCCTCAGTGCACCCCGCCCCATGCCTCAGTACGTGTGTGGTAACCTaGTGCCAGCCTCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: CSPGCSLGSSVHPAPCLSTCVVT*CQPPLS
Trigger: AGACAGAGGAGGCTGGCAGCAGGTTACCACACACGT...ACTGAGGCATGGGGCGGGGTGCACTGAGGATCCGAGCGAGCAGCCAGGGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR GCA 90 bp TTGCCCCACCCCCTTTGTGCTCCAAAGCTGCCTTCCTGCAGCCCTGGCTGCTCGGCCCCACCCCCTTTGTaGTCCAAAGCTGCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: LPHPLCAPKLPSCSPGCSAPPPL*SKAAFL
Trigger: CAGGAAGGCAGCTTTGGAGCACAAAGGGGGTGGGGC...CGAGCAGCCAGGGCTGCAGGAAGGCAGCTTTGGAGCACAAAGGGGGTGGGGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp TTGGCTGCGTGCCTCGGGCCAGTGCACAACCTGGACACCTGTATCTGGCAGCTCTGGGGCCTGGCGGGATaGAGATGGTCAGAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LAACLGPVHNLDTCIWQLWGLAG*RWSEGP
Trigger: AGGCCCTTCTGACCATCTCCATCCCGCCAGGCCCCA...GAGCTGCCAGATACAGGTGTCCAGGTTGTGCACTGGCCCGAGGCACGCAGCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp TGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTAAGGTGGGGACCCTCCTGCTGGTCGTaGTCCACTCCACCATCAGTG +
Preference number: 4 (lower is better)
Translates to: WLGMAICTGSCRARVRWGPSCWS*STPPSV
Trigger: CACTGATGGTGGAGTGGACCACGACCAGCAGGAGGG...TCCCCACCTTACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp TGCAGCCCTGGCTGCTCGCTCGGATCCTCAGTGCACCCCGCCCCATGCCTCAGTCCTCCTCCTTCACGCTaGACATCAGCACCTCTATGG +
Preference number: 4 (lower is better)
Translates to: CSPGCSLGSSVHPAPCLSPPPSR*TSAPLW
Trigger: CCATAGAGGTGCTGATGTCCAGCGTGAAGGAGGAGG...ACTGAGGCATGGGGCGGGGTGCACTGAGGATCCGAGCGAGCAGCCAGGGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp GAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCCTCCTCCTTCACGCTaGACATCAGCACCTCTATGG +
Preference number: 4 (lower is better)
Translates to: EAAFSHSRRPRCPLGHGCPPPSR*TSAPLW
Trigger: CCATAGAGGTGCTGATGTCCAGCGTGAAGGAGGAGG...GCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp GGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCAAGGCCGGCCATGGCCTaGGAACCCGCCTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: GREREGNRLVIGWAWPSARPAMA*EPAWMV
Trigger: CACCATCCAGGCGGGTTCCCAGGCCATGGCCGGCCT...TGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp AGAGGAGTGAGCTGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCGCGGCACCAGCATGTTaGCTAGAATGGCGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: RGVSCGSCLQPQQTATLSAAPAC*LEWRGR
Trigger: CCGGCCTCGCCATTCTAGCCAACATGCTGGTGCCGC...GGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACTCCTCT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp AGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGTGTGCCCGGGCTGCCTaGGGCATCCGAGCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: REREGNRLVIGWAWPSAQCARAA*GIRAAH
Trigger: GTGGGCAGCTCGGATGCCCCAGGCAGCCCGGGCACA...CTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377585.7
CDS-3UTR TCA 90 bp GATCCTCAGTGCACCCCGCCCCATGCCTCAGTGCAGCGTCATCTTCGTGGGCTCGCAGGCCGCAGTAGATaGCGAATGTTGGGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: DPQCTPPHASVQRHLRGLAGRSR*RMLGRR
Trigger: TCTTCGCCCCAACATTCGTCATCTACTGCGGCCTGC...GAGCCCACGAAGATGACGCTGCACTGAGGCATGGGGCGGGGTGCACTGAGGATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR TCA 90 bp TCGGCCACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCCAGCCTTGTAGATGGTaGGGCAGGTTAGGCTTATCC +
Preference number: 4 (lower is better)
Translates to: SATAAWPLPCQALEVAQLQPCRW*GRLGLS
Trigger: GGATAAGCCTAACCTGCCTCACCATCTACAAGGCTG...GAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGTGGCCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
CDS-3UTR TCA 90 bp ACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCGAAGGTGTAAAGACATaGGCCTGGCAGGGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: TAAWPLPCQALEVAQLASEGVKT*AWQGKG
Trigger: TCCCTTTCCCTGCCAGGCTCATGTCTTTACACCTTC...GGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp GACATGAGCCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATCCCGCCACGGCCAACTaGAGGCAGCACCAGCTCAGC +
Preference number: 4 (lower is better)
Translates to: DMSLAGKGRGTVSLLVGHPATAN*RQHQLS
Trigger: GCTGAGCTGGTGCTGCCTGCAGTTGGCCGTGGCGGG...ATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGGCTCATGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR GCA 90 bp CCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTTTGGGGCGAAGATGGTaGTGGTGCCCGCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: PGREREGNRLVIGWAWPSLGRRW*WCPPRP
Trigger: TGGCCGTGGCGGGCACCAGCACCATCTTCGCCCCAA...AGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR GCA 90 bp ACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCGTGAACTCAGAAAGATaGCGGCCATCCCAAAAGCGG +
Preference number: 4 (lower is better)
Translates to: TAAWPLPCQALEVAQLASVNSER*RPSQKR
Trigger: CCGCTTTTGGGATGGCCGGCATCTTTCTGAGTTCAC...GGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR GCA 90 bp AGTGAGCTGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGTTGGGCATGGCCATCTaGACAGGCTCCTGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: SELWKLPSATADGHAVHSLGMAI*TGSCRA
Trigger: GGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAA...CGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp GCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCTGGCCCCACTGTATGCAGAATaGCATCTGCTGTCATCCTTG +
Preference number: 4 (lower is better)
Translates to: AFSHSRRPRCPLGHGCLAPLYAE*HLLSSL
Trigger: CAAGGATGACAGCAGATGGCATTCTGCATACAGTGG...GGCCAGGCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428570.1
CDS-3UTR CCA 90 bp AGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACGGGCGAAGATGGTGCTaGTGCCCGCCACGGCCAACT +
Preference number: 4 (lower is better)
Translates to: RPLKSPNSPPRSDWRRGNGRRWC*CPPRPT
Trigger: AGTTGGCCGTGGCGGGCACCAGCACCATCTTCGCCC...GTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp TGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTAAGGTGGGGAAATTCACCACCAGCATaGCGCAGCTCCTCCAGCGGA +
Preference number: 4 (lower is better)
Translates to: WLGMAICTGSCRARVRWGNSPPA*RSSSSG
Trigger: TCCGCTGGAGGAGCTGCGCCATGCTGGTGGTGAATT...TCCCCACCTTACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000301891.9
ENST00000377581.7
CDS-3UTR CCA 90 bp CCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGGGAACCCGCCTGGATaGTGCGGCGGCCAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: PGREREGNRLVIGWAWPSGNPPG*CGGQGN
Trigger: GTTTCCTTGGCCGCCGCACCATCCAGGCGGGTTCCC...AGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp TCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTAGGGAACCCGCCTGGATaGTGCGGCGGCCAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: SRYWLGMAICTGSCRARVGNPPG*CGGQGN
Trigger: GTTTCCTTGGCCGCCGCACCATCCAGGCGGGTTCCC...TACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp TGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTAAGGTGGGGATGGCTCTCCAGGTCCTaGATAGTGTCAGGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: WLGMAICTGSCRARVRWGWLSRS*IVSGSG
Trigger: TCCGCTCCCTGACACTATCCAGGACCTGGAGAGCCA...TCCCCACCTTACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp TGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGTCTTGCCGGTTGCCCTaGGCTGCTGTTGATTTCTGG +
Preference number: 4 (lower is better)
Translates to: CGSCLQPQQTATLSTRPRSCRLP*AAVDFW
Trigger: CCAGAAATCAACAGCAGCCCAGGGCAACCGGCAAGA...CCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp TGTTTCTGCAAGCTGGCCCCTCCACCACTCTGCACTTTTGCTTCCTTGCCCATCTCGGCCACGGCTGCCTaGCCTCTGCCATGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: CFCKLAPPPLCTFASLPISATAA*PLPCQA
Trigger: GGCCTGGCATGGCAGAGGCCAGGCAGCCGTGGCCGA...GATGGGCAAGGAAGCAAAAGTGCAGAGTGGTGGAGGGGCCAGCTTGCAGAAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp GAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCGTTATTGGTTGGGCATaGCCATCTGCACAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: EAAFSHSRRPRCPLGHGCVIGWA*PSAQAP
Trigger: AGGAGCCTGTGCAGATGGCCATGCCCAACCAATAAC...GCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp ACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCGAACCGTCTCGTTATTaGTTGGGCATGGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: TAAWPLPCQALEVAQLASEPSRY*LGMAIC
Trigger: GCAGATGGCCATGCCCAACCAATAACGAGACGGTTC...GGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp TGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGGGCTCTGTATGTGGTaGGGTGAGATTGGAACCCAG +
Preference number: 4 (lower is better)
Translates to: WKLPSATADGHAVHSATAGLCMW*GEIGTQ
Trigger: CTGGGTTCCAATCTCACCCCACCACATACAGAGCCC...AGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp GAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCCAGCCTCCTCTGTCTaGTGTTTGGTGGTGTGTTTG +
Preference number: 4 (lower is better)
Translates to: EAAFSHSRRPRCPLGHGCPASSV*CLVVCL
Trigger: CAAACACACCACCAAACACCAGACAGAGGAGGCTGG...GCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp GGGCCAGTGCACAACCTGGACACCTGTATCTGGCAGCTCTCTCAGCAGGTTCCAGCCTTCCTGCAGCCCTaGCTGCTCGCTCGGATCCTC +
Preference number: 4 (lower is better)
Translates to: GPVHNLDTCIWQLSQQVPAFLQP*LLARIL
Trigger: GAGGATCCGAGCGAGCAGCCAGGGCTGCAGGAAGGC...TGGAACCTGCTGAGAGAGCTGCCAGATACAGGTGTCCAGGTTGTGCACTGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR TCA 90 bp GGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCAGGCGGCCAAGGAAACTaGGCAAGAGGGCAGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GREREGNRLVIGWAWPSAGGQGN*ARGQWW
Trigger: CCACCACTGCCCTCTTGCTCAGTTTCCTTGGCCGCC...TGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp ACGGCCTCTTGCCGGTTGCCCTGGGCTGCTGTTGATTTCTGGCTCTCCAGGTCCAGGTACTTTCCACAGTaGCGGCCTCTTGCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: TASCRLPWAAVDFWLSRSRYFPQ*RPLAGC
Trigger: GCAACCGGCAAGAGGCCGTCACTGTGGAAAGTACCT...GGACCTGGAGAGCCAGAAATCAACAGCAGCCCAGGGCAACCGGCAAGAGGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428570.1
CDS-3UTR TCA 90 bp TGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTAAGGTGGGGAGTAAGGTGGGGAATCTaGTCAGGGCAGGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: WLGMAICTGSCRARVRWGVRWGI*SGQGEE
Trigger: CTCTTCTCCCTGCCCTGATCAGATTCCCCACCTTAC...TCCCCACCTTACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp TGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGGTTGGCGTGGCTGAGTaGAGGTGTAAAGACATGAGC +
Preference number: 4 (lower is better)
Translates to: CGSCLQPQQTATLSTRPRVGVAE*RCKDMS
Trigger: GCTCATGTCTTTACACCTTCACTCAGCCACGCCAAC...CCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp TCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTAGCCCTGGGCTGCTGTTaGTTTCCGCACTGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: SRYWLGMAICTGSCRARVALGCC*FPHWRW
Trigger: CCAACGCCAGTGCGGAAATCAACAGCAGCCCAGGGC...TACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377581.7
CDS-3UTR GCA 90 bp CTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCGAAGATGGTGCTGGTaGCCGCCACGGCCAACTGCA +
Preference number: 4 (lower is better)
Translates to: LAGKGRGTVSLLVGHGHLRRWCW*PPRPTA
Trigger: TGCAGTTGGCCGTGGCGGGCACCAGCACCATCTTCG...CAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR GCA 90 bp GGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACGAAGATGGTGCTGGTaGCCGCCACGGCCAACTGCA +
Preference number: 4 (lower is better)
Translates to: GREREGNRLVIGWAWPSARRWCW*PPRPTA
Trigger: TGCAGTTGGCCGTGGCGGGCACCAGCACCATCTTCG...TGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR GCA 90 bp TCGGCCACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCTCTGAGCTCCTGAAGTaGTTGGTCTGGTTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: SATAAWPLPCQALEVAQLSELLK*LVWFAL
Trigger: AAGGGCAAACCAGACCAAGCACTTCAGGAGCTCAGA...GAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGTGGCCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR GCA 90 bp CTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGTCACGGCCCAGGCTCTaGAGGTCGAAGACCAGCCCA +
Preference number: 4 (lower is better)
Translates to: LAGKGRGTVSLLVGHGHLSRPRL*RSKTSP
Trigger: TGGGCTGGTCTTCGACCTGCAGAGCCTGGGCCGTGA...CAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp ATAGTGTCAGGGAGCGGAAGTCCCTGGGTCTCCGGGAGGAAGAACAGCACAACCTCACGGCCCAGGCTCTaGAGGTCGAAGACCAGCCCA +
Preference number: 4 (lower is better)
Translates to: IVSGSGSPWVSGRKNSTTSRPRL*RSKTSP
Trigger: TGGGCTGGTCTTCGACCTGCAGAGCCTGGGCCGTGA...GGTTGTGCTGTTCTTCCTCCCGGAGACCCAGGGACTTCCGCTCCCTGACACTAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428570.1
CDS-3UTR GCA 90 bp AGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACACAGTGACGGCCTCTTaGCGGTTGCCCTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: RPLKSPNSPPRSDWRRGNTVTAS*RLPWAA
Trigger: AGCAGCCCAGGGCAACCGGCAAGAGGCCGTCACTGT...GTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp ACAGATATCAGTGGCATGGAGGGTTGGAGACGAGGGCTAGGAGCCTCCTGTGCTCGCTCGGATCCTCAGTaGACCCCGCCCCATGCCTCA +
Preference number: 4 (lower is better)
Translates to: TDISGMEGWRRGLGASCARSDPQ*TPPHAS
Trigger: TGAGGCATGGGGCGGGGTGCACTGAGGATCCGAGCG...AGCACAGGAGGCTCCTAGCCCTCGTCTCCAACCCTCCATGCCACTGATATCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR GCA 90 bp CTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCCAAAGCTGCCTTCCTaGAGCCCTGGCTGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: LAGKGRGTVSLLVGHGHLPKLPS*SPGCSL
Trigger: GAGCGAGCAGCCAGGGCTGCAGGAAGGCAGCTTTGG...CAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR GCA 90 bp AGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACGGACTAAGCTCACTGTaGCCGGGCTGCCTGGGGCAT +
Preference number: 4 (lower is better)
Translates to: RPLKSPNSPPRSDWRRGNGLSSL*PGCLGH
Trigger: ATGCCCCAGGCAGCCCGGGCACAGTGAGCTTAGTCC...GTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377585.7
CDS-3UTR CCA 90 bp GGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGAGGGGCTTCAAGCCCTaGGAGCTGCACACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GNRLVIGWAWPSAQAPVGRGFKP*ELHTRS
Trigger: GGACCTGGTGTGCAGCTCCCAGGGCTTGAAGCCCCT...CCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp ATAGTGTCAGGGAGCGGAAGTCCCTGGGTCTCCGGGAGGAAGAACAGCACAACCGCCCCGAAGAGGGCCTaGAGGAGGAAGATGTCACGG +
Preference number: 4 (lower is better)
Translates to: IVSGSGSPWVSGRKNSTTAPKRA*RRKMSR
Trigger: CCGTGACATCTTCCTCCTCCAGGCCCTCTTCGGGGC...GGTTGTGCTGTTCTTCCTCCCGGAGACCCAGGGACTTCCGCTCCCTGACACTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428570.1
CDS-3UTR CCA 90 bp TCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTAGCGGCACCAGCATGTTaGCTAGAATGGCGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: SRYWLGMAICTGSCRARVAAPAC*LEWRGR
Trigger: CCGGCCTCGCCATTCTAGCCAACATGCTGGTGCCGC...TACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp AGAGGAGTGAGCTGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCTGGCTCTCCAGGTCCTaGATAGTGTCAGGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: RGVSCGSCLQPQQTATLSWLSRS*IVSGSG
Trigger: TCCGCTCCCTGACACTATCCAGGACCTGGAGAGCCA...GGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACTCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp GAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCGCTGCTGTTGATTTCTaGCTCTCCAGGTCCTGGATA +
Preference number: 4 (lower is better)
Translates to: EAAFSHSRRPRCPLGHGCAAVDF*LSRSWI
Trigger: TATCCAGGACCTGGAGAGCCAGAAATCAACAGCAGC...GCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp TGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTCGTCTCGTTATTGGTTaGGCATGGCCATCTGCACAG +
Preference number: 4 (lower is better)
Translates to: WKLPSATADGHAVHSATARLVIG*AWPSAQ
Trigger: CTGTGCAGATGGCCATGCCCAACCAATAACGAGACG...AGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp AGCAGGGGCAGGGCTTGGCGGCTCATCAGGATCAGGGGACCCATCATAGCCCCCCGTCTCGTTATTGGTTaGGCATGGCCATCTGCACAG +
Preference number: 4 (lower is better)
Translates to: SRGRAWRLIRIRGPIIAPRLVIG*AWPSAQ
Trigger: CTGTGCAGATGGCCATGCCCAACCAATAACGAGACG...GGGGGCTATGATGGGTCCCCTGATCCTGATGAGCCGCCAAGCCCTGCCCCTGCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000428570.1
CDS-3UTR CCA 90 bp TGGGCTAGGATCAGGGCCGGGTTCGGCCGTGTTTCTGCAAGCTGGCCCCTCCACCTTATTGTGAGCCACTaGAGGGCTTTCAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: WARIRAGFGRVSASWPLHLIVSH*RAFSRE
Trigger: CTCCCTGCTGAAAGCCCTCCAGTGGCTCACAATAAG...GTGGAGGGGCCAGCTTGCAGAAACACGGCCGAACCCGGCCCTGATCCTAGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp TGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTAAGGTGGGGACACAACCAGGCGCACTaGCGTTGGAAAGAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: WLGMAICTGSCRARVRWGHNQAH*RWKEFS
Trigger: GCTGAACTCTTTCCAACGCCAGTGCGCCTGGTTGTG...TCCCCACCTTACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416590.1
CDS-3UTR TCA 90 bp CCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCTTCGAGAACGCCATaGACAGAGCTGCCTCGGCTG +
Preference number: 4 (lower is better)
Translates to: PGREREGNRLVIGWAWPSASRTP*TELPRL
Trigger: CAGCCGAGGCAGCTCTGTTCATGGCGTTCTCGAAGC...AGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR TCA 90 bp CATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGCCTGGGATGGCGGCTaGGAAGTTCTCCAGGAGCAT +
Preference number: 4 (lower is better)
Translates to: HARPLKSPNSPPRSDWRRAWDGG*EVLQEH
Trigger: ATGCTCCTGGAGAACTTCTCAGCCGCCATCCCAGGC...TCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR TCA 90 bp GGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCAGCCCTGGGCTGCTGTTaGTTTCTGGCTCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GREREGNRLVIGWAWPSAALGCC*FLALQV
Trigger: GACCTGGAGAGCCAGAAATCAACAGCAGCCCAGGGC...TGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp CCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCCCTGGGCTGCTGTTaGTTTCTGGCTCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: PGREREGNRLVIGWAWPSALGCC*FLALQV
Trigger: GACCTGGAGAGCCAGAAATCAACAGCAGCCCAGGGC...AGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp CATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGCCCTGGGCTGCTGTTaGTTTCTGGCTCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: HARPLKSPNSPPRSDWRRALGCC*FLALQV
Trigger: GACCTGGAGAGCCAGAAATCAACAGCAGCCCAGGGC...TCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp GGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCACGCCTCCGGCTTaGTCCAAGAGCTTCGAGAAC +
Preference number: 4 (lower is better)
Translates to: GNRLVIGWAWPSAQAPVGPTPPA*SKSFEN
Trigger: GTTCTCGAAGCTCTTGGAGCAAGCCGGAGGCGTGGG...CCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR GCA 90 bp TCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTATCAAGCCCTGGGAGCTaGACACCAGGTCCCACTTGG +
Preference number: 4 (lower is better)
Translates to: SRYWLGMAICTGSCRARVSSPGS*TPGPTW
Trigger: CCAAGTGGGACCTGGTGTGCAGCTCCCAGGGCTTGA...TACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR GCA 90 bp CTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGTCAAGCCCTGGGAGCTaGACACCAGGTCCCACTTGG +
Preference number: 4 (lower is better)
Translates to: LAGKGRGTVSLLVGHGHLSSPGS*TPGPTW
Trigger: CCAAGTGGGACCTGGTGTGCAGCTCCCAGGGCTTGA...CAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR GCA 90 bp TGTTTCTGCAAGCTGGCCCCTCCACCACTCTGCACTTTTGCTTCCTTGCCCATCTTGGGGCGAAGATGGTaGTGGTGCCCGCCACGGCCA +
Preference number: 4 (lower is better)
Translates to: CFCKLAPPPLCTFASLPILGRRW*WCPPRP
Trigger: TGGCCGTGGCGGGCACCAGCACCATCTTCGCCCCAA...GATGGGCAAGGAAGCAAAAGTGCAGAGTGGTGGAGGGGCCAGCTTGCAGAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR GCA 90 bp CTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCGGCCTCTTGCCGGTTaGCCTGGGCTGCTGTTGATT +
Preference number: 4 (lower is better)
Translates to: LAGKGRGTVSLLVGHGHLRPLAG*PGLLLI
Trigger: AATCAACAGCAGCCCAGGGCAACCGGCAAGAGGCCG...CAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp TGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCCGGCCTCTTGCCGGTTaGCCTGGGCTGCTGTTGATT +
Preference number: 4 (lower is better)
Translates to: WQGKGGEPSRYWLGMAICRPLAG*PGLLLI
Trigger: AATCAACAGCAGCCCAGGGCAACCGGCAAGAGGCCG...GCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp GAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTACAGTGACGGCCTCTTaGCGGTTGCCCTGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: EREGNRLVIGWAWPSAQATVTAS*RLPWAA
Trigger: AGCAGCCCAGGGCAACCGGCAAGAGGCCGTCACTGT...AGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp GGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCATTGGGCATGGCCATCTaGACAGGCTCCTGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: GREREGNRLVIGWAWPSALGMAI*TGSCRA
Trigger: GGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAA...TGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp GCTAGGAGCCTCCTGTGCTGGAAAGAGCCCTGGGCTAGGATCAGGGCCGGGTTCGCACTTTTGCTTCCTTaGCCATCTGAGATGGGCAGC +
Preference number: 4 (lower is better)
Translates to: ARSLLCWKEPWARIRAGFALLLP*PSEMGS
Trigger: GCTGCCCATCTCAGATGGGCAAGGAAGCAAAAGTGC...GAACCCGGCCCTGATCCTAGCCCAGGGCTCTTTCCAGCACAGGAGGCTCCTAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp TGGGCTAGGATCAGGGCCGGGTTCGGCCGTGTTTCTGCAAGCTGGCCCCTCCACTGGTCAGAAGGGCCTTaGGGGTCATGTTTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: WARIRAGFGRVSASWPLHWSEGP*GSCLWK
Trigger: TTTCCACAAACATGACCCCCAAGGCCCTTCTGACCA...GTGGAGGGGCCAGCTTGCAGAAACACGGCCGAACCCGGCCCTGATCCTAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp ACCACTCTGCACTTTTGCTTCCTTGCCCATCTGAGATGGGCAGCCGGCCTCGACCCCTCCTGCTGGTCGTaGTCCACTCCACCATCAGTG +
Preference number: 4 (lower is better)
Translates to: TTLHFCFLAHLRWAAGLDPSCWS*STPPSV
Trigger: CACTGATGGTGGAGTGGACCACGACCAGCAGGAGGG...GTCGAGGCCGGCTGCCCATCTCAGATGGGCAAGGAAGCAAAAGTGCAGAGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp CATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGACCACCGGGCGGATTCTaGCAGCCACCAGGATATCAG +
Preference number: 4 (lower is better)
Translates to: HARPLKSPNSPPRSDWRRPPGGF*QPPGYQ
Trigger: CTGATATCCTGGTGGCTGCCAGAATCCGCCCGGTGG...TCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp GCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCTGGCCCTGAAGTGCTTGGTCTaGTTTGCCCTTAATAATCAG +
Preference number: 4 (lower is better)
Translates to: AFSHSRRPRCPLGHGCLALKCLV*FALNNQ
Trigger: CTGATTATTAAGGGCAAACCAGACCAAGCACTTCAG...GGCCAGGCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp GCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCGCCTGGGAACCCGCCTaGATGGTGCGGCGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: AALSAGSIYLAGAKISSPAWEPA*MVRRPR
Trigger: CCTTGGCCGCCGCACCATCCAGGCGGGTTCCCAGGC...GGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp CCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCATGTTGGCTAGAATaGCGAGGCCGGCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: PGREREGNRLVIGWAWPSACWLE*RGRPWP
Trigger: AGGCCATGGCCGGCCTCGCCATTCTAGCCAACATGC...AGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp TGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCTGCTGTTGATTTCTaGCTCTCCAGGTCCTGGATA +
Preference number: 4 (lower is better)
Translates to: WKLPSATADGHAVHSATAAAVDF*LSRSWI
Trigger: TATCCAGGACCTGGAGAGCCAGAAATCAACAGCAGC...AGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp ACGGCCTCTTGCCGGTTGCCCTGGGCTGCTGTTGATTTCTGGCTCTCCAGGTCCTCTTGCCGGTTGCCCTaGGCTGCTGTTGATTTCTGG +
Preference number: 4 (lower is better)
Translates to: TASCRLPWAAVDFWLSRSSCRLP*AAVDFW
Trigger: CCAGAAATCAACAGCAGCCCAGGGCAACCGGCAAGA...GGACCTGGAGAGCCAGAAATCAACAGCAGCCCAGGGCAACCGGCAAGAGGCCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428570.1
CDS-3UTR CCA 90 bp AGAGGAGTGAGCTGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCGGGCTCTGTATGTGGTaGGGTGAGATTGGAACCCAG +
Preference number: 4 (lower is better)
Translates to: RGVSCGSCLQPQQTATLSGLCMW*GEIGTQ
Trigger: CTGGGTTCCAATCTCACCCCACCACATACAGAGCCC...GGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACTCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp AGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACAGGAGCCTCCTGTGCTaGAAAGAGCCCTGGGCTAGG +
Preference number: 4 (lower is better)
Translates to: RPLKSPNSPPRSDWRRGNRSLLC*KEPWAR
Trigger: CCTAGCCCAGGGCTCTTTCCAGCACAGGAGGCTCCT...GTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR CAA 72 bp GTTTCTGCAAGCTGGCCCCTCCACCACTCTGCACTTTaGCTTCCTTGCCCATCTGAGATGGGCAGCCGGCCT +
Preference number: 4 (lower is better)
Translates to: VSASWPLHHSAL*LPCPSEMGSRP
Trigger: AGGCCGGCTGCCCATCTCAGATGGGCAAGGAAGCAAAAGTGCAGAGTGGTGGAGGGGCCAGCTTGCAGAAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR CAA 72 bp AGCGAGGTACTTTCCACAGTGACGGCCTCTTGCCGGTaGCCCTGGGCTGCTGTTGATTTCTGGCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SEVLSTVTASCR*PWAAVDFWLSR
Trigger: CCTGGAGAGCCAGAAATCAACAGCAGCCCAGGGCAACCGGCAAGAGGCCGTCACTGTGGAAAGTACCTCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428570.1
CDS-3UTR TCA 90 bp CTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCCAGGATCCCGGACATaGAGATGGACTGGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: LAGKGRGTVSLLVGHGHLPGSRT*RWTGLG
Trigger: CCCTAAGCCAGTCCATCTTCATGTCCGGGATCCTGG...CAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR TCA 90 bp AGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACGGCAAAGAAGGGCACTaGTGCTGCCAGCTGGAGAGT +
Preference number: 4 (lower is better)
Translates to: RPLKSPNSPPRSDWRRGNGKEGH*CCQLES
Trigger: ACTCTCCAGCTGGCAGCATCAGTGCCCTTCTTTGCC...GTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR TCA 90 bp CATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGACTCGCCTCCACGCTCTaGTTGGAGAAGAGGCAACTC +
Preference number: 4 (lower is better)
Translates to: HARPLKSPNSPPRSDWRRLASTL*LEKRQL
Trigger: GAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAG...TCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp CTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCTCGCCTCCACGCTCTaGTTGGAGAAGAGGCAACTC +
Preference number: 4 (lower is better)
Translates to: LAGKGRGTVSLLVGHGHLLASTL*LEKRQL
Trigger: GAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAG...CAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp GGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCTCGCCTCCACGCTCTaGTTGGAGAAGAGGCAACTC +
Preference number: 4 (lower is better)
Translates to: GNRLVIGWAWPSAQAPVGLASTL*LEKRQL
Trigger: GAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAG...CCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp AGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACCTCGCCTCCACGCTCTaGTTGGAGAAGAGGCAACTC +
Preference number: 4 (lower is better)
Translates to: RPLKSPNSPPRSDWRRGNLASTL*LEKRQL
Trigger: GAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAG...GTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp ACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCCTTTCCAGGAGTCTTTGGCCATGCCAGGCCCTTaGAGTCGCCCAACTCGCCTC +
Preference number: 4 (lower is better)
Translates to: TRLHALIGEEATPFQESLAMPGP*SRPTRL
Trigger: GAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGC...CAAAGACTCCTGGAAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp TTGGCTGCGTGCCTCGGGCCAGTGCACAACCTGGACACCTGTATCTGGCAGCTCAGGGAGGTCTGGGCATaGATCAAGAAAAGGTGTCCC +
Preference number: 4 (lower is better)
Translates to: LAACLGPVHNLDTCIWQLREVWA*IKKRCP
Trigger: GGGACACCTTTTCTTGATTCATGCCCAGACCTCCCT...GAGCTGCCAGATACAGGTGTCCAGGTTGTGCACTGGCCCGAGGCACGCAGCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR GCA 90 bp GAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCCACGCCTCCGGCTTaGTCCAAGAGCTTCGAGAAC +
Preference number: 4 (lower is better)
Translates to: EREGNRLVIGWAWPSAQAPTPPA*SKSFEN
Trigger: GTTCTCGAAGCTCTTGGAGCAAGCCGGAGGCGTGGG...AGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR GCA 90 bp CATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAATGAAGGTGAGCACCTaGAGGGTCTGGAAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: HARPLKSPNSPPRSDWRRMKVST*RVWKRP
Trigger: GGGCCTCTTCCAGACCCTGCAGGTGCTCACCTTCAT...TCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR GCA 90 bp TGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACCACACGCAGGGTCTaGAAATCTTGCGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: WQGKGGEPSRYWLGMAICTTRRV*KSCGTS
Trigger: GCTGGTGCCGCAAGATTTGCAGACCCTGCGTGTGGT...GCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
CDS-3UTR GCA 90 bp GGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCAGTGAGCTGTGGAAGCTaGCTTCAGCCACAGCAGACG +
Preference number: 4 (lower is better)
Translates to: GREREGNRLVIGWAWPSAVSCGS*LQPQQT
Trigger: CGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCAC...TGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp TGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCGTGAGCTGTGGAAGCTaGCTTCAGCCACAGCAGACG +
Preference number: 4 (lower is better)
Translates to: WQGKGGEPSRYWLGMAICVSCGS*LQPQQT
Trigger: CGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCAC...GCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp AGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACGTGAGCTGTGGAAGCTaGCTTCAGCCACAGCAGACG +
Preference number: 4 (lower is better)
Translates to: RPLKSPNSPPRSDWRRGNVSCGS*LQPQQT
Trigger: CGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCAC...GTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp GAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCCACTGTATGCAGAATaGCATCTGCTGTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: EAAFSHSRRPRCPLGHGCPLYAE*HLLSSS
Trigger: TGAAGATGACAGCAGATGGCATTCTGCATACAGTGG...GCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377585.7
CDS-3UTR CCA 90 bp CTGGCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCGCCCAGCGCCGCCTaGCCTGCGCTGAAGGCACAT +
Preference number: 4 (lower is better)
Translates to: LAALSAGSIYLAGAKISSPPSAA*PALKAH
Trigger: ATGTGCCTTCAGCGCAGGCCAGGCGGCGCTGGGCGG...TGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp GAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTACTGATGCTGCCAGCTaGAGAGTCCTCCAGTCCCGC +
Preference number: 4 (lower is better)
Translates to: EREGNRLVIGWAWPSAQATDAAS*RVLQSR
Trigger: GCGGGACTGGAGGACTCTCCAGCTGGCAGCATCAGT...AGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp GAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCACCGGGCGGATTCTaGCAGCCACCAGGATATCAG +
Preference number: 4 (lower is better)
Translates to: EREGNRLVIGWAWPSAQAPPGGF*QPPGYQ
Trigger: CTGATATCCTGGTGGCTGCCAGAATCCGCCCGGTGG...AGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp TGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTATGGTCAGGTTCTTaGCCTCCTTGTGGCCATTTA +
Preference number: 4 (lower is better)
Translates to: CGSCLQPQQTATLSTRPRLWSGS*PPCGHL
Trigger: TAAATGGCCACAAGGAGGCCAAGAACCTGACCATAG...CCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp CCAGGGAAGGGCATGAGGGTAACTTTGTGGCAGGGCCACAGATATCAGTGGCATGCCCCGAAGAGGGCCTaGAGGAGGAAGATGTCACGG +
Preference number: 4 (lower is better)
Translates to: PGKGMRVTLWQGHRYQWHAPKRA*RRKMSR
Trigger: CCGTGACATCTTCCTCCTCCAGGCCCTCTTCGGGGC...ATGCCACTGATATCTGTGGCCCTGCCACAAAGTTACCCTCATGCCCTTCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp ACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCCTTTCCAGGAGTCTTTGGGGAACCCGCCTGGATaGTGCGGCGGCCAAGGAAAC +
Preference number: 4 (lower is better)
Translates to: TRLHALIGEEATPFQESLGNPPG*CGGQGN
Trigger: GTTTCCTTGGCCGCCGCACCATCCAGGCGGGTTCCC...CAAAGACTCCTGGAAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp GAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTGCATGTTGGCTAGAATaGCGAGGCCGGCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: EREGNRLVIGWAWPSAQAACWLE*RGRPWP
Trigger: AGGCCATGGCCGGCCTCGCCATTCTAGCCAACATGC...AGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp GGTGGGGTGAGATTGGAACCCAGTCTCTGGTTGGCGTGGCTGAGTGAAGGTGTAGCATGTTGGCTAGAATaGCGAGGCCGGCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: GGVRLEPSLWLAWLSEGVACWLE*RGRPWP
Trigger: AGGCCATGGCCGGCCTCGCCATTCTAGCCAACATGC...TACACCTTCACTCAGCCACGCCAACCAGAGACTGGGTTCCAATCTCACCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp GATCCTCAGTGCACCCCGCCCCATGCCTCAGTGCAGCGTCATCTTCGTGGGCTCGCTGCTGTTGATTTCTaGCTCTCCAGGTCCTGGATA +
Preference number: 4 (lower is better)
Translates to: DPQCTPPHASVQRHLRGLAAVDF*LSRSWI
Trigger: TATCCAGGACCTGGAGAGCCAGAAATCAACAGCAGC...GAGCCCACGAAGATGACGCTGCACTGAGGCATGGGGCGGGGTGCACTGAGGATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp AGTGAGCTGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGCGTCTCGTTATTGGTTaGGCATGGCCATCTGCACAG +
Preference number: 4 (lower is better)
Translates to: SELWKLPSATADGHAVHSRLVIG*AWPSAQ
Trigger: CTGTGCAGATGGCCATGCCCAACCAATAACGAGACG...CGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp TGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCTCTTGCCGGTTGCCCTaGGCTGCTGTTGATTTCCGC +
Preference number: 4 (lower is better)
Translates to: WQGKGGEPSRYWLGMAICSCRLP*AAVDFR
Trigger: GCGGAAATCAACAGCAGCCCAGGGCAACCGGCAAGA...GCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377581.7
CDS-3UTR TCA 90 bp GACATGAGCCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATCCAGGATCCCGGACATaGAGATGGACTGGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: DMSLAGKGRGTVSLLVGHPGSRT*RWTGLG
Trigger: CCCTAAGCCAGTCCATCTTCATGTCCGGGATCCTGG...ATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGGCTCATGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR TCA 90 bp GAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCTCGCCTCCACGCTCTaGTTGGAGAAGAGGCAACTC +
Preference number: 4 (lower is better)
Translates to: EREGNRLVIGWAWPSAQALASTL*LEKRQL
Trigger: GAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAG...AGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp CTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGGTAAGGTGGGGAATCTaGTCAGGGCAGGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LAGKGRGTVSLLVGHGHLVRWGI*SGQGEE
Trigger: CTCTTCTCCCTGCCCTGATCAGATTCCCCACCTTAC...CAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp CATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGTGAGGAGGCAGGAGTaGTTGACCCAGTGTACACAG +
Preference number: 4 (lower is better)
Translates to: HARPLKSPNSPPRSDWRRVRRQE*LTQCTQ
Trigger: CTGTGTACACTGGGTCAATCACTCCTGCCTCCTCAC...TCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR GCA 90 bp ACAGATATCAGTGGCATGGAGGGTTGGAGACGAGGGCTAGGAGCCTCCTGTGCTATGAAGGTGAGCACCTaGAGGGTCTGGAAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: TDISGMEGWRRGLGASCAMKVST*RVWKRP
Trigger: GGGCCTCTTCCAGACCCTGCAGGTGCTCACCTTCAT...AGCACAGGAGGCTCCTAGCCCTCGTCTCCAACCCTCCATGCCACTGATATCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR GCA 90 bp CACGCTCTGATTGGAGAAGAGGCAACTCCTTTCCAGGAGTCTTTGACTAAAGGGCAGCGCCGCCTGGCCTaGGCTGAAGGCACATCCCAC +
Preference number: 4 (lower is better)
Translates to: HALIGEEATPFQESLTKGQRRLA*AEGTSH
Trigger: GTGGGATGTGCCTTCAGCGCAGGCCAGGCGGCGCTG...CCCTTTAGTCAAAGACTCCTGGAAAGGAGTTGCCTCTTCTCCAATCAGAGCGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR GCA 90 bp GGTGGGGTGAGATTGGAACCCAGTCTCTGGTTGGCGTGGCTGAGTGAAGGTGTAACCACACGCAGGGTCTaGAAATCTTGCGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: GGVRLEPSLWLAWLSEGVTTRRV*KSCGTS
Trigger: GCTGGTGCCGCAAGATTTGCAGACCCTGCGTGTGGT...TACACCTTCACTCAGCCACGCCAACCAGAGACTGGGTTCCAATCTCACCCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
CDS-3UTR GCA 90 bp CTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGAGCCGGCCCACTGTATaGAGAATGCCATCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LAGKGRGTVSLLVGHGHLSRPTV*RMPSAV
Trigger: GACAGCAGATGGCATTCTGCATACAGTGGGCCGGCT...CAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377585.7
ENST00000428570.1
CDS-3UTR GCA 90 bp GGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGAGCCGGCCCACTGTATaGAGAATGCCATCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: GNRLVIGWAWPSAQAPVGSRPTV*RMPSAV
Trigger: GACAGCAGATGGCATTCTGCATACAGTGGGCCGGCT...CCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377585.7
ENST00000428570.1
CDS-3UTR GCA 90 bp GAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTGTGAGCTGTGGAAGCTaGCTTCAGCCACAGCAGACG +
Preference number: 4 (lower is better)
Translates to: EREGNRLVIGWAWPSAQAVSCGS*LQPQQT
Trigger: CGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCAC...AGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp TCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTATGTGTGGTAACCTGCTaGCAGCCTCCTCTGTCTGGT +
Preference number: 4 (lower is better)
Translates to: SRYWLGMAICTGSCRARVCVVTC*QPPLSG
Trigger: ACCAGACAGAGGAGGCTGGCAGCAGGTTACCACACA...TACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR GCA 90 bp CCAGGGAAGGGCATGAGGGTAACTTTGTGGCAGGGCCACAGATATCAGTGGCATGTTCGGCCGTGTTTCTaGAAGCTGGCCCCTCCACCA +
Preference number: 4 (lower is better)
Translates to: PGKGMRVTLWQGHRYQWHVRPCF*KLAPPP
Trigger: TGGTGGAGGGGCCAGCTTGCAGAAACACGGCCGAAC...ATGCCACTGATATCTGTGGCCCTGCCACAAAGTTACCCTCATGCCCTTCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR GCA 90 bp TGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTAAGGTGGGGAATGCAGAATGCCATCTaGTGTCATCTTCACCACCAG +
Preference number: 4 (lower is better)
Translates to: WLGMAICTGSCRARVRWGMQNAI*CHLHHQ
Trigger: CTGGTGGTGAAGATGACAGCAGATGGCATTCTGCAT...TCCCCACCTTACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377585.7
CDS-3UTR CCA 90 bp AGTGAGCTGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGTTCTCCAGGAGCATCTaGGAAGGTATCATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SELWKLPSATADGHAVHSFSRSI*EGIMRQ
Trigger: CTGCCTCATGATACCTTCCCAGATGCTCCTGGAGAA...CGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp TTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCCTTTATGTTGGGGCGAAGATaGTGCTGGTGCCCGCCACGG +
Preference number: 4 (lower is better)
Translates to: LKSPNSPPRSDWRRGNSFMLGRR*CWCPPR
Trigger: CCGTGGCGGGCACCAGCACCATCTTCGCCCCAACAT...AAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp CTGGCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCAAGGCCGGCCATGGCCTaGGAACCCGCCTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: LAALSAGSIYLAGAKISSRPAMA*EPAWMV
Trigger: CACCATCCAGGCGGGTTCCCAGGCCATGGCCGGCCT...TGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp GTGCCTCGGGCCAGTGCACAACCTGGACACCTGTATCTGGCAGCTCTCTCAGCATGCTGTCATCCGCACTaGCGTTGGAAAGAGTTCAGC +
Preference number: 4 (lower is better)
Translates to: VPRASAQPGHLYLAALSACCHPH*RWKEFS
Trigger: GCTGAACTCTTTCCAACGCCAGTGCGGATGACAGCA...TGCTGAGAGAGCTGCCAGATACAGGTGTCCAGGTTGTGCACTGGCCCGAGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp AACCAGGCTGGAAGCAATGGAGATAACGCCATAGAGGAGAGGAGGCAGCAGGGGTGGCTCTCCAGGTCCTaGATAGTGTCAGGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: NQAGSNGDNAIEERRQQGWLSRS*IVSGSG
Trigger: TCCGCTCCCTGACACTATCCAGGACCTGGAGAGCCA...CCCCTGCTGCCTCCTCTCCTCTATGGCGTTATCTCCATTGCTTCCAGCCTGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428570.1
CDS-3UTR CCA 90 bp TTACACCTTCCCGCAGAAGCCAGGAGTTGCCCCACCCCCTTTGTGCTCCAAAGCTCTTGCCGGTTGCCCTaGGCTGCTGTTGATTTCTGG +
Preference number: 4 (lower is better)
Translates to: LHLPAEARSCPTPFVLQSSCRLP*AAVDFW
Trigger: CCAGAAATCAACAGCAGCCCAGGGCAACCGGCAAGA...GCTTTGGAGCACAAAGGGGGTGGGGCAACTCCTGGCTTCTGCGGGAAGGTGTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp TCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTATCTTGCCGGTTGCCCTaGGCTGCTGTTGATTTCTGG +
Preference number: 4 (lower is better)
Translates to: SRYWLGMAICTGSCRARVSCRLP*AAVDFW
Trigger: CCAGAAATCAACAGCAGCCCAGGGCAACCGGCAAGA...TACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp TGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCGGGCTCTGTATGTGGTaGGGTGAGATTGGAACCCAG +
Preference number: 4 (lower is better)
Translates to: WQGKGGEPSRYWLGMAICGLCMW*GEIGTQ
Trigger: CTGGGTTCCAATCTCACCCCACCACATACAGAGCCC...GCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp CATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGCTGCCCTTGACATCTaGCAAAGCCAGAAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: HARPLKSPNSPPRSDWRRAALDI*QSQKAL
Trigger: CAAGGCCTTCTGGCTTTGCCAGATGTCAAGGGCAGC...TCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR CAA 72 bp CTGCCAGCCTCCTCTGTCTGGTGTTTGGTGGTGTGTTaGGCCGTCTTCGTAACCATAGGGCTGGAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: LPASSVWCLVVC*AVFVTIGLEAL
Trigger: GAGGGCTTCCAGCCCTATGGTTACGAAGACGGCCAAACACACCACCAAACACCAGACAGAGGAGGCTGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
3UTR CAA 72 bp TTGTGGCAGGGCCACAGATATCAGTGGCATGGAGGGTaGGAGACGAGGGCTAGGAGCCTCCTGTGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LWQGHRYQWHGG*ETRARSLLCWK
Trigger: TTTCCAGCACAGGAGGCTCCTAGCCCTCGTCTCCAACCCTCCATGCCACTGATATCTGTGGCCCTGCCACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR TCA 90 bp GTGCCTCGGGCCAGTGCACAACCTGGACACCTGTATCTGGCAGCTCTCTCAGCAACCTTTCTGAGCTCCTaGAGTGCTTGGTCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: VPRASAQPGHLYLAALSATFLSS*SAWSGL
Trigger: CAAACCAGACCAAGCACTTCAGGAGCTCAGAAAGGT...TGCTGAGAGAGCTGCCAGATACAGGTGTCCAGGTTGTGCACTGGCCCGAGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR TCA 90 bp GGTGGGGTGAGATTGGAACCCAGTCTCTGGTTGGCGTGGCTGAGTGAAGGTGTATCCTGGCCACCTTTCTaGGCTCCTGAAGTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: GGVRLEPSLWLAWLSEGVSWPPF*APEVLG
Trigger: ACCAAGCACTTCAGGAGCTCAGAAAGGTGGCCAGGA...TACACCTTCACTCAGCCACGCCAACCAGAGACTGGGTTCCAATCTCACCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR TCA 90 bp CCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTCAGCCTTGTAGATGGTaGGGCAGGTTAGGCTTATCC +
Preference number: 4 (lower is better)
Translates to: PGREREGNRLVIGWAWPSQPCRW*GRLGLS
Trigger: GGATAAGCCTAACCTGCCTCACCATCTACAAGGCTG...AGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
CDS-3UTR TCA 90 bp CTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCAGCCTTGTAGATGGTaGGGCAGGTTAGGCTTATCC +
Preference number: 4 (lower is better)
Translates to: LAGKGRGTVSLLVGHGHLQPCRW*GRLGLS
Trigger: GGATAAGCCTAACCTGCCTCACCATCTACAAGGCTG...CAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
CDS-3UTR TCA 90 bp CTGGCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCAGCCATGCCAGGCCCTTaGAGTCGCCCAACTCGCCTC +
Preference number: 4 (lower is better)
Translates to: LAALSAGSIYLAGAKISSAMPGP*SRPTRL
Trigger: GAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGC...TGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp ACCACTCTGCACTTTTGCTTCCTTGCCCATCTGAGATGGGCAGCCGGCCTCGACGAAGGTGTAAAGACATaGGCCTGGCAGGGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: TTLHFCFLAHLRWAAGLDEGVKT*AWQGKG
Trigger: TCCCTTTCCCTGCCAGGCTCATGTCTTTACACCTTC...GTCGAGGCCGGCTGCCCATCTCAGATGGGCAAGGAAGCAAAAGTGCAGAGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR TCA 90 bp CATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGTTGGCGTGGCTGAGTaGAGGTGTAAAGACATGAGC +
Preference number: 4 (lower is better)
Translates to: HARPLKSPNSPPRSDWRRVGVAE*RCKDMS
Trigger: GCTCATGTCTTTACACCTTCACTCAGCCACGCCAAC...TCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp CCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGTTGGCGTGGCTGAGTaGAGGTGTAAAGACATGAGC +
Preference number: 4 (lower is better)
Translates to: PGREREGNRLVIGWAWPSVGVAE*RCKDMS
Trigger: GCTCATGTCTTTACACCTTCACTCAGCCACGCCAAC...AGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp TTACACCTTCCCGCAGAAGCCAGGAGTTGCCCCACCCCCTTTGTGCTCCAAAGCGTGAACTCAGAAAGATaGCGGCCATCCCAAAAGCGG +
Preference number: 4 (lower is better)
Translates to: LHLPAEARSCPTPFVLQSVNSER*RPSQKR
Trigger: CCGCTTTTGGGATGGCCGGCATCTTTCTGAGTTCAC...GCTTTGGAGCACAAAGGGGGTGGGGCAACTCCTGGCTTCTGCGGGAAGGTGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR GCA 90 bp TCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCTGATACCCAGCGCCGCCTGGCCTaGGCTGAAGGCACATCCCAC +
Preference number: 4 (lower is better)
Translates to: SQQVPFIWPVLRSVHPDTQRRLA*AEGTSH
Trigger: GTGGGATGTGCCTTCAGCGCAGGCCAGGCGGCGCTG...GGTATCAGGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR GCA 90 bp AAGGGCATGAGGGTAACTTTGTGGCAGGGCCACAGATATCAGTGGCATGGAGGGACCACACGCAGGGTCTaGAAATCTTGCGGCACCAGC +
Preference number: 4 (lower is better)
Translates to: KGMRVTLWQGHRYQWHGGTTRRV*KSCGTS
Trigger: GCTGGTGCCGCAAGATTTGCAGACCCTGCGTGTGGT...CCCTCCATGCCACTGATATCTGTGGCCCTGCCACAAAGTTACCCTCATGCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp GCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCTGGGGCCTGGCGGGATaGAGATGGTCAGAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: AALSAGSIYLAGAKISSPWGLAG*RWSEGP
Trigger: AGGCCCTTCTGACCATCTCCATCCCGCCAGGCCCCA...GGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp AGTGAGCTGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGAGGATATCAGGGAGATaGCAAAGAAGGGCACTGATG +
Preference number: 4 (lower is better)
Translates to: SELWKLPSATADGHAVHSRISGR*QRRALM
Trigger: CATCAGTGCCCTTCTTTGCCATCTCCCTGATATCCT...CGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp GTAGGTGGATTTGGGAGCTGTGAGGAGGCAGGAGTGATTGACCCAGTGTACACACCACCGGGCGGATTCTaGCAGCCACCAGGATATCAG +
Preference number: 4 (lower is better)
Translates to: VGGFGSCEEAGVIDPVYTPPGGF*QPPGYQ
Trigger: CTGATATCCTGGTGGCTGCCAGAATCCGCCCGGTGG...TGTGTACACTGGGTCAATCACTCCTGCCTCCTCACAGCTCCCAAATCCACCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp GGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGTTCTTGGCCTCCTTGTaGCCATTTATCCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: GNRLVIGWAWPSAQAPVGFLASL*PFILAT
Trigger: GGTGGCCAGGATAAATGGCCACAAGGAGGCCAAGAA...CCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp TCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCTGATACCAGGCCGGCCATGGCCTaGGAACCCGCCTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: SQQVPFIWPVLRSVHPDTRPAMA*EPAWMV
Trigger: CACCATCCAGGCGGGTTCCCAGGCCATGGCCGGCCT...GGTATCAGGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp CTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGAAGAGGAGTGAGCTGTaGAAGCTGCCTTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: LAGKGRGTVSLLVGHGHLKRSEL*KLPSAT
Trigger: TGTGGCTGAAGGCAGCTTCCACAGCTCACTCCTCTT...CAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp TGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCAAGAGGAGTGAGCTGTaGAAGCTGCCTTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: WQGKGGEPSRYWLGMAICKRSEL*KLPSAT
Trigger: TGTGGCTGAAGGCAGCTTCCACAGCTCACTCCTCTT...GCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp GGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCAGAACCGTCTCGTTATTaGTTGGGCATGGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: GREREGNRLVIGWAWPSAEPSRY*LGMAIC
Trigger: GCAGATGGCCATGCCCAACCAATAACGAGACGGTTC...TGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp CATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGAACCGTCTCGTTATTaGTTGGGCATGGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: HARPLKSPNSPPRSDWRREPSRY*LGMAIC
Trigger: GCAGATGGCCATGCCCAACCAATAACGAGACGGTTC...TCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp GGGCCAGTGCACAACCTGGACACCTGTATCTGGCAGCTCTCTCAGCAGGTTCCATTGGAACCCAGTCTCTaGTTGGCGTGGCTGAGTGAA +
Preference number: 4 (lower is better)
Translates to: GPVHNLDTCIWQLSQQVPLEPSL*LAWLSE
Trigger: TTCACTCAGCCACGCCAACCAGAGACTGGGTTCCAA...TGGAACCTGCTGAGAGAGCTGCCAGATACAGGTGTCCAGGTTGTGCACTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp AGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTTGGAACCCAGTCTCTaGTTGGCGTGGCTGAGTGAA +
Preference number: 4 (lower is better)
Translates to: RPLKSPNSPPRSDWRRGNLEPSL*LAWLSE
Trigger: TTCACTCAGCCACGCCAACCAGAGACTGGGTTCCAA...GTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp TGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCTTGGAACCCAGTCTCTaGTTGGCGTGGCTGAGTGAA +
Preference number: 4 (lower is better)
Translates to: WQGKGGEPSRYWLGMAICLEPSL*LAWLSE
Trigger: TTCACTCAGCCACGCCAACCAGAGACTGGGTTCCAA...GCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp GACATGAGCCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGGCTCTGTATGTGGTaGGGTGAGATTGGAACCCAG +
Preference number: 4 (lower is better)
Translates to: DMSLAGKGRGTVSLLVGHGLCMW*GEIGTQ
Trigger: CTGGGTTCCAATCTCACCCCACCACATACAGAGCCC...ATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGGCTCATGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp CGTGGTGTGAACCAGGGTGTAGCCAGAGTGAAGGGAAGTAGGTGGATTTGGGAGCGTGTTTCTGCAAGCTaGCCCCTCCACCACTCTGCA +
Preference number: 4 (lower is better)
Translates to: RGVNQGVARVKGSRWIWERVSAS*PLHHSA
Trigger: TGCAGAGTGGTGGAGGGGCCAGCTTGCAGAAACACG...CTCCCAAATCCACCTACTTCCCTTCACTCTGGCTACACCCTGGTTCACACCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp GTAGGTGGATTTGGGAGCTGTGAGGAGGCAGGAGTGATTGACCCAGTGTACACAGGCCTGAGATTGAGGTaGCCCAGAGTGGGGTCTCCA +
Preference number: 4 (lower is better)
Translates to: VGGFGSCEEAGVIDPVYTGLRLR*PRVGSP
Trigger: TGGAGACCCCACTCTGGGCCACCTCAATCTCAGGCC...TGTGTACACTGGGTCAATCACTCCTGCCTCCTCACAGCTCCCAAATCCACCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp CATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGACAGGCGCACTGGCGTTaGAAAGAGTTCAGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: HARPLKSPNSPPRSDWRRQAHWR*KEFSLV
Trigger: TACAAGGCTGAACTCTTTCCAACGCCAGTGCGCCTG...TCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416590.1
CDS-3UTR TCA 90 bp TCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTAACCTTTCTGAGCTCCTaGAGTGCTTGGTCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: SRYWLGMAICTGSCRARVTFLSS*SAWSGL
Trigger: CAAACCAGACCAAGCACTTCAGGAGCTCAGAAAGGT...TACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR TCA 90 bp TTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCCTTTAGGTACTTTCCACAGTaGCGGCCTCTTGCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: LKSPNSPPRSDWRRGNSFRYFPQ*RPLAGC
Trigger: GCAACCGGCAAGAGGCCGTCACTGTGGAAAGTACCT...AAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp GAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTGTTGGCGTGGCTGAGTaGAGGTGTAAAGACATGAGC +
Preference number: 4 (lower is better)
Translates to: EREGNRLVIGWAWPSAQAVGVAE*RCKDMS
Trigger: GCTCATGTCTTTACACCTTCACTCAGCCACGCCAAC...AGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp GGTGGGGTGAGATTGGAACCCAGTCTCTGGTTGGCGTGGCTGAGTGAAGGTGTAGTGAACTCAGAAAGATaGCGGCCATCCCAAAAGCGG +
Preference number: 4 (lower is better)
Translates to: GGVRLEPSLWLAWLSEGVVNSER*RPSQKR
Trigger: CCGCTTTTGGGATGGCCGGCATCTTTCTGAGTTCAC...TACACCTTCACTCAGCCACGCCAACCAGAGACTGGGTTCCAATCTCACCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR GCA 90 bp AGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCTGAGCTCCTGAAGTaGTTGGTCTGGTTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: RPLKSPNSPPRSDWRRGNSELLK*LVWFAL
Trigger: AAGGGCAAACCAGACCAAGCACTTCAGGAGCTCAGA...GTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR GCA 90 bp GCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCTTGGGCATGGCCATCTaGACAGGCTCCTGTAGGGCC +
Preference number: 4 (lower is better)
Translates to: AALSAGSIYLAGAKISSPLGMAI*TGSCRA
Trigger: GGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAA...GGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp CGTGGTGTGAACCAGGGTGTAGCCAGAGTGAAGGGAAGTAGGTGGATTTGGGAGTTTGTGCTCCAAAGCTaGCTTCCTGCAGCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: RGVNQGVARVKGSRWIWEFVLQS*LPAALA
Trigger: AGCCAGGGCTGCAGGAAGGCAGCTTTGGAGCACAAA...CTCCCAAATCCACCTACTTCCCTTCACTCTGGCTACACCCTGGTTCACACCACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR GCA 90 bp TCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTAGGCTGTTGTGCAGAGTaGAATGTAGACATCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SRYWLGMAICTGSCRARVGCCAE*NVDIRD
Trigger: GTCCCTGATGTCTACATTGCACTCTGCACAACAGCC...TACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp TCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCTGATACCAGCACCTGCAGGGTCTaGAAGAGGCCCACGCCTCCG +
Preference number: 4 (lower is better)
Translates to: SQQVPFIWPVLRSVHPDTSTCRV*KRPTPP
Trigger: CGGAGGCGTGGGCCTCTTCCAGACCCTGCAGGTGCT...GGTATCAGGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp CACGCTCTGATTGGAGAAGAGGCAACTCCTTTCCAGGAGTCTTTGACTAAAGGGTGGGGCCTGGCGGGATaGAGATGGTCAGAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: HALIGEEATPFQESLTKGWGLAG*RWSEGP
Trigger: AGGCCCTTCTGACCATCTCCATCCCGCCAGGCCCCA...CCCTTTAGTCAAAGACTCCTGGAAAGGAGTTGCCTCTTCTCCAATCAGAGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp GAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTGACATGAAGATGGACTaGCTTAGGGGCTTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: EREGNRLVIGWAWPSAQADMKMD*LRGFKP
Trigger: GGGCTTGAAGCCCCTAAGCCAGTCCATCTTCATGTC...AGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp CTGGCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCAATGTTGGGGCGAAGATaGTGCTGGTGCCCGCCACGG +
Preference number: 4 (lower is better)
Translates to: LAALSAGSIYLAGAKISSMLGRR*CWCPPR
Trigger: CCGTGGCGGGCACCAGCACCATCTTCGCCCCAACAT...TGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp TCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTAGTAGATGACGAATGTTaGGGCGAAGATGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: SRYWLGMAICTGSCRARVVDDEC*GEDGAG
Trigger: ACCAGCACCATCTTCGCCCCAACATTCGTCATCTAC...TACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp GGTGGGGTGAGATTGGAACCCAGTCTCTGGTTGGCGTGGCTGAGTGAAGGTGTATTCTTGGCCTCCTTGTaGCCATTTATCCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: GGVRLEPSLWLAWLSEGVFLASL*PFILAT
Trigger: GGTGGCCAGGATAAATGGCCACAAGGAGGCCAAGAA...TACACCTTCACTCAGCCACGCCAACCAGAGACTGGGTTCCAATCTCACCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp TCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTAACATCAGCACCTCTATaGTCAGGTTCTTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SRYWLGMAICTGSCRARVTSAPL*SGSWPP
Trigger: AGGAGGCCAAGAACCTGACCATAGAGGTGCTGATGT...TACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp CTGGCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCAGCCCCGAAGAGGGCCTaGAGGAGGAAGATGTCACGG +
Preference number: 4 (lower is better)
Translates to: LAALSAGSIYLAGAKISSAPKRA*RRKMSR
Trigger: CCGTGACATCTTCCTCCTCCAGGCCCTCTTCGGGGC...TGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp CACGCTCTGATTGGAGAAGAGGCAACTCCTTTCCAGGAGTCTTTGACTAAAGGGGCGGCACCAGCATGTTaGCTAGAATGGCGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: HALIGEEATPFQESLTKGAAPAC*LEWRGR
Trigger: CCGGCCTCGCCATTCTAGCCAACATGCTGGTGCCGC...CCCTTTAGTCAAAGACTCCTGGAAAGGAGTTGCCTCTTCTCCAATCAGAGCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp CCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCTGCTGTTGATTTCTaGCTCTCCAGGTCCTGGATA +
Preference number: 4 (lower is better)
Translates to: PGREREGNRLVIGWAWPSAAVDF*LSRSWI
Trigger: TATCCAGGACCTGGAGAGCCAGAAATCAACAGCAGC...AGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp TGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCCCTCCACGCTCTGATTaGAGAAGAGGCAACTCCTTT +
Preference number: 4 (lower is better)
Translates to: WQGKGGEPSRYWLGMAICPPRSD*RRGNSF
Trigger: AAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGG...GCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp CTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCCTCCACGCTCTGATTaGAGAAGAGGCAACTCCTTT +
Preference number: 4 (lower is better)
Translates to: LAGKGRGTVSLLVGHGHLPPRSD*RRGNSF
Trigger: AAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGG...CAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp ATAGTGTCAGGGAGCGGAAGTCCCTGGGTCTCCGGGAGGAAGAACAGCACAACCCCTCCACGCTCTGATTaGAGAAGAGGCAACTCCTTT +
Preference number: 4 (lower is better)
Translates to: IVSGSGSPWVSGRKNSTTPPRSD*RRGNSF
Trigger: AAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGG...GGTTGTGCTGTTCTTCCTCCCGGAGACCCAGGGACTTCCGCTCCCTGACACTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428570.1
CDS-3UTR CCA 90 bp AGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGAAGAGGAGTGAGCTGTaGAAGCTGCCTTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: REREGNRLVIGWAWPSAQKRSEL*KLPSAT
Trigger: TGTGGCTGAAGGCAGCTTCCACAGCTCACTCCTCTT...CTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp GAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTGTTATTGGTTGGGCATaGCCATCTGCACAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: EREGNRLVIGWAWPSAQAVIGWA*PSAQAP
Trigger: AGGAGCCTGTGCAGATGGCCATGCCCAACCAATAAC...AGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp GGTGGGGTGAGATTGGAACCCAGTCTCTGGTTGGCGTGGCTGAGTGAAGGTGTAGTTATTGGTTGGGCATaGCCATCTGCACAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: GGVRLEPSLWLAWLSEGVVIGWA*PSAQAP
Trigger: AGGAGCCTGTGCAGATGGCCATGCCCAACCAATAAC...TACACCTTCACTCAGCCACGCCAACCAGAGACTGGGTTCCAATCTCACCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp GAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCGTCTCGTTATTGGTTaGGCATGGCCATCTGCACAG +
Preference number: 4 (lower is better)
Translates to: EREGNRLVIGWAWPSAQARLVIG*AWPSAQ
Trigger: CTGTGCAGATGGCCATGCCCAACCAATAACGAGACG...AGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp AGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGAACCGTCTCGTTATTaGTTGGGCATGGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: REREGNRLVIGWAWPSAQEPSRY*LGMAIC
Trigger: GCAGATGGCCATGCCCAACCAATAACGAGACGGTTC...CTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp GACATGAGCCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGAACCGTCTCGTTATTaGTTGGGCATGGCCATCTGC +
Preference number: 4 (lower is better)
Translates to: DMSLAGKGRGTVSLLVGHEPSRY*LGMAIC
Trigger: GCAGATGGCCATGCCCAACCAATAACGAGACGGTTC...ATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGGCTCATGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp ACCACTCTGCACTTTTGCTTCCTTGCCCATCTGAGATGGGCAGCCGGCCTCGACATCCCAGAGTTTTCATaGCCTGGACAAGGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: TTLHFCFLAHLRWAAGLDIPEFS*PGQGRS
Trigger: AGACCTCCCTTGTCCAGGCCATGAAAACTCTGGGAT...GTCGAGGCCGGCTGCCCATCTCAGATGGGCAAGGAAGCAAAAGTGCAGAGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp TGTTTCTGCAAGCTGGCCCCTCCACCACTCTGCACTTTTGCTTCCTTGCCCATCGGCCACAGATATCAGTaGCATGGAGGGTTGGAGACG +
Preference number: 4 (lower is better)
Translates to: CFCKLAPPPLCTFASLPIGHRYQ*HGGLET
Trigger: CGTCTCCAACCCTCCATGCCACTGATATCTGTGGCC...GATGGGCAAGGAAGCAAAAGTGCAGAGTGGTGGAGGGGCCAGCTTGCAGAAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR TCA 90 bp GACATGAGCCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATACCTTTCTGAGCTCCTaGAGTGCTTGGTCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: DMSLAGKGRGTVSLLVGHTFLSS*SAWSGL
Trigger: CAAACCAGACCAAGCACTTCAGGAGCTCAGAAAGGT...ATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGGCTCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR TCA 90 bp TTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCCTTTTCCTGGCCACCTTTCTaGGCTCCTGAAGTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: LKSPNSPPRSDWRRGNSFSWPPF*APEVLG
Trigger: ACCAAGCACTTCAGGAGCTCAGAAAGGTGGCCAGGA...AAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR TCA 90 bp ACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCCTTTCCAGGAGTCTTTGGTAAGGTGGGGAATCTaGTCAGGGCAGGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: TRLHALIGEEATPFQESLVRWGI*SGQGEE
Trigger: CTCTTCTCCCTGCCCTGATCAGATTCCCCACCTTAC...CAAAGACTCCTGGAAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp TTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCCTTTGTAAGGTGGGGAATCTaGTCAGGGCAGGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LKSPNSPPRSDWRRGNSFVRWGI*SGQGEE
Trigger: CTCTTCTCCCTGCCCTGATCAGATTCCCCACCTTAC...AAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp CTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGTTCTCATTTCACAGATaGGGGCTCTGTATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LAGKGRGTVSLLVGHGHLFSFHR*GLCMWW
Trigger: CCACCACATACAGAGCCCTCATCTGTGAAATGAGAA...CAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp GCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCGTGAGCTGTGGAAGCTaGCTTCAGCCACAGCAGACG +
Preference number: 4 (lower is better)
Translates to: AALSAGSIYLAGAKISSPVSCGS*LQPQQT
Trigger: CGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCAC...GGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp GGTGGGGTGAGATTGGAACCCAGTCTCTGGTTGGCGTGGCTGAGTGAAGGTGTATGGGGGTCATGTTTGTaGAAACCGCAGAGCCATTGT +
Preference number: 4 (lower is better)
Translates to: GGVRLEPSLWLAWLSEGVWGSCL*KPQSHC
Trigger: ACAATGGCTCTGCGGTTTCCACAAACATGACCCCCA...TACACCTTCACTCAGCCACGCCAACCAGAGACTGGGTTCCAATCTCACCCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp AGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGTAGATGACGAATGTTaGGGCGAAGATGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: REREGNRLVIGWAWPSAQVDDEC*GEDGAG
Trigger: ACCAGCACCATCTTCGCCCCAACATTCGTCATCTAC...CTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp ACCACTCTGCACTTTTGCTTCCTTGCCCATCTGAGATGGGCAGCCGGCCTCGACAGGATATCAGGGAGATaGCAAAGAAGGGCACTGATG +
Preference number: 4 (lower is better)
Translates to: TTLHFCFLAHLRWAAGLDRISGR*QRRALM
Trigger: CATCAGTGCCCTTCTTTGCCATCTCCCTGATATCCT...GTCGAGGCCGGCTGCCCATCTCAGATGGGCAAGGAAGCAAAAGTGCAGAGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp TGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCAGGATATCAGGGAGATaGCAAAGAAGGGCACTGATG +
Preference number: 4 (lower is better)
Translates to: WQGKGGEPSRYWLGMAICRISGR*QRRALM
Trigger: CATCAGTGCCCTTCTTTGCCATCTCCCTGATATCCT...GCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp TGTTTCTGCAAGCTGGCCCCTCCACCACTCTGCACTTTTGCTTCCTTGCCCATCTTCTTGGCCTCCTTGTaGCCATTTATCCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: CFCKLAPPPLCTFASLPIFLASL*PFILAT
Trigger: GGTGGCCAGGATAAATGGCCACAAGGAGGCCAAGAA...GATGGGCAAGGAAGCAAAAGTGCAGAGTGGTGGAGGGGCCAGCTTGCAGAAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp CATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGACTATGGTCAGGTTCTTaGCCTCCTTGTGGCCATTTA +
Preference number: 4 (lower is better)
Translates to: HARPLKSPNSPPRSDWRRLWSGS*PPCGHL
Trigger: TAAATGGCCACAAGGAGGCCAAGAACCTGACCATAG...TCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp GGTGGGGTGAGATTGGAACCCAGTCTCTGGTTGGCGTGGCTGAGTGAAGGTGTAACATCAGCACCTCTATaGTCAGGTTCTTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: GGVRLEPSLWLAWLSEGVTSAPL*SGSWPP
Trigger: AGGAGGCCAAGAACCTGACCATAGAGGTGCTGATGT...TACACCTTCACTCAGCCACGCCAACCAGAGACTGGGTTCCAATCTCACCCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp AGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGCATCCGCACTGGCGTTaGAAAGAGTTCAGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: REREGNRLVIGWAWPSAQHPHWR*KEFSLV
Trigger: TACAAGGCTGAACTCTTTCCAACGCCAGTGCGGATG...CTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp AAGGGCATGAGGGTAACTTTGTGGCAGGGCCACAGATATCAGTGGCATGGAGGGCCTCTGTCTGGTGTTTaGTGGTGTGTTTGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: KGMRVTLWQGHRYQWHGGPLSGV*WCVWPS
Trigger: AGACGGCCAAACACACCACCAAACACCAGACAGAGG...CCCTCCATGCCACTGATATCTGTGGCCCTGCCACAAAGTTACCCTCATGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp CCAGGGAAGGGCATGAGGGTAACTTTGTGGCAGGGCCACAGATATCAGTGGCATAGAGTTTTCATGGCCTaGACAAGGGAGGTCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PGKGMRVTLWQGHRYQWHRVFMA*TREVWA
Trigger: TGCCCAGACCTCCCTTGTCCAGGCCATGAAAACTCT...ATGCCACTGATATCTGTGGCCCTGCCACAAAGTTACCCTCATGCCCTTCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp GGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCAATGAGGGTAACTTTGTaGCAGGGCCACAGATATCAG +
Preference number: 4 (lower is better)
Translates to: GREREGNRLVIGWAWPSAMRVTL*QGHRYQ
Trigger: CTGATATCTGTGGCCCTGCCACAAAGTTACCCTCAT...TGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp AGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACGACCTAACTGCTGTTTaGAACCGATTGCAGCCACAA +
Preference number: 4 (lower is better)
Translates to: RPLKSPNSPPRSDWRRGNDLTAV*NRLQPQ
Trigger: TTGTGGCTGCAATCGGTTCCAAACAGCAGTTAGGTC...GTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377585.7
CDS-3UTR TCA 90 bp TTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCCTTTGTTGGCGTGGCTGAGTaGAGGTGTAAAGACATGAGC +
Preference number: 4 (lower is better)
Translates to: LKSPNSPPRSDWRRGNSFVGVAE*RCKDMS
Trigger: GCTCATGTCTTTACACCTTCACTCAGCCACGCCAAC...AAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR GCA 90 bp TTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCCTTTATCTGCTGTCATCCTTaGGGCACCAGCATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: LKSPNSPPRSDWRRGNSFICCHP*GTSMLA
Trigger: AGCCAACATGCTGGTGCCGCAAGGATGACAGCAGAT...AAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428570.1
CDS-3UTR CCA 90 bp TTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCCTTTGACATGAAGATGGACTaGCTTAGGGGCTTCAAGCCC +
Preference number: 4 (lower is better)
Translates to: LKSPNSPPRSDWRRGNSFDMKMD*LRGFKP
Trigger: GGGCTTGAAGCCCCTAAGCCAGTCCATCTTCATGTC...AAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp CGTGGTGTGAACCAGGGTGTAGCCAGAGTGAAGGGAAGTAGGTGGATTTGGGAGGTAGATGACGAATGTTaGGGCGAAGATGGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: RGVNQGVARVKGSRWIWEVDDEC*GEDGAG
Trigger: ACCAGCACCATCTTCGCCCCAACATTCGTCATCTAC...CTCCCAAATCCACCTACTTCCCTTCACTCTGGCTACACCCTGGTTCACACCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp ACAGATATCAGTGGCATGGAGGGTTGGAGACGAGGGCTAGGAGCCTCCTGTGCTCTATGGTCAGGTTCTTaGCCTCCTTGTGGCCATTTA +
Preference number: 4 (lower is better)
Translates to: TDISGMEGWRRGLGASCALWSGS*PPCGHL
Trigger: TAAATGGCCACAAGGAGGCCAAGAACCTGACCATAG...AGCACAGGAGGCTCCTAGCCCTCGTCTCCAACCCTCCATGCCACTGATATCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp TTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCCTTTAAGAGGAGTGAGCTGTaGAAGCTGCCTTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: LKSPNSPPRSDWRRGNSFKRSEL*KLPSAT
Trigger: TGTGGCTGAAGGCAGCTTCCACAGCTCACTCCTCTT...AAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp GACATGAGCCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATTTTCCGCACTGGCGTTaGAAAGAGTTCAGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: DMSLAGKGRGTVSLLVGHFPHWR*KEFSLV
Trigger: TACAAGGCTGAACTCTTTCCAACGCCAGTGCGGAAA...ATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGGCTCATGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377581.7
CDS-3UTR TCA 90 bp CACGCTCTGATTGGAGAAGAGGCAACTCCTTTCCAGGAGTCTTTGACTAAAGGGTCCTGGCCACCTTTCTaGGCTCCTGAAGTGCTTGGT +
Preference number: 4 (lower is better)
Translates to: HALIGEEATPFQESLTKGSWPPF*APEVLG
Trigger: ACCAAGCACTTCAGGAGCTCAGAAAGGTGGCCAGGA...CCCTTTAGTCAAAGACTCCTGGAAAGGAGTTGCCTCTTCTCCAATCAGAGCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR TCA 90 bp TCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCTGATACCAGGTACTTTCCACAGTaGCGGCCTCTTGCCGGTTGC +
Preference number: 4 (lower is better)
Translates to: SQQVPFIWPVLRSVHPDTRYFPQ*RPLAGC
Trigger: GCAACCGGCAAGAGGCCGTCACTGTGGAAAGTACCT...GGTATCAGGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp GCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCGAAGGTGTAAAGACATaGGCCTGGCAGGGAAAGGGA +
Preference number: 4 (lower is better)
Translates to: AALSAGSIYLAGAKISSPEGVKT*AWQGKG
Trigger: TCCCTTTCCCTGCCAGGCTCATGTCTTTACACCTTC...GGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp TCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCTGATACCTCTTGTGTCCAGGAGTaGCTGTGCGGATGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: SQQVPFIWPVLRSVHPDTSCVQE*LCGCPR
Trigger: TCTGGGGCATCCGCACAGTCACTCCTGGACACAAGA...GGTATCAGGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377585.7
CDS-3UTR GCA 90 bp TTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCCTTTTCTGAGCTCCTGAAGTaGTTGGTCTGGTTTGCCCTT +
Preference number: 4 (lower is better)
Translates to: LKSPNSPPRSDWRRGNSFSELLK*LVWFAL
Trigger: AAGGGCAAACCAGACCAAGCACTTCAGGAGCTCAGA...AAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR GCA 90 bp CTGGCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCAAGCCGGCCCACTGTATaGAGAATGCCATCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LAALSAGSIYLAGAKISSSRPTV*RMPSAV
Trigger: GACAGCAGATGGCATTCTGCATACAGTGGGCCGGCT...TGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377585.7
ENST00000428570.1
CDS-3UTR GCA 90 bp TGTTTCTGCAAGCTGGCCCCTCCACCACTCTGCACTTTTGCTTCCTTGCCCATCCAAACAGCAAAAGGGTaGCGTTTGGTTGAAAGCCGA +
Preference number: 4 (lower is better)
Translates to: CFCKLAPPPLCTFASLPIQTAKG*RLVESR
Trigger: TCGGCTTTCAACCAAACGGCACCCTTTTGCTGTTTG...GATGGGCAAGGAAGCAAAAGTGCAGAGTGGTGGAGGGGCCAGCTTGCAGAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR GCA 90 bp AAGGGCATGAGGGTAACTTTGTGGCAGGGCCACAGATATCAGTGGCATGGAGGGACCACTCTGCACTTTTaGTTCCTTGCCCATCTGAGA +
Preference number: 4 (lower is better)
Translates to: KGMRVTLWQGHRYQWHGGTTLHF*FLAHLR
Trigger: TCTCAGATGGGCAAGGAAGCAAAAGTGCAGAGTGGT...CCCTCCATGCCACTGATATCTGTGGCCCTGCCACAAAGTTACCCTCATGCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp TTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCCTTTTGGTCAGAAGGGCCTTaGGGGTCATGTTTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: LKSPNSPPRSDWRRGNSFWSEGP*GSCLWK
Trigger: TTTCCACAAACATGACCCCCAAGGCCCTTCTGACCA...AAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp AGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACCTGAAGTGCTTGGTCTaGTTTGCCCTTAATAATCAG +
Preference number: 4 (lower is better)
Translates to: RPLKSPNSPPRSDWRRGNLKCLV*FALNNQ
Trigger: CTGATTATTAAGGGCAAACCAGACCAAGCACTTCAG...GTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp TTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCCTTTACATCAGCACCTCTATaGTCAGGTTCTTGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: LKSPNSPPRSDWRRGNSFTSAPL*SGSWPP
Trigger: AGGAGGCCAAGAACCTGACCATAGAGGTGCTGATGT...AAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp CTGGCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCTCCTCCTTCACGCTaGACATCAGCACCTCTATGG +
Preference number: 4 (lower is better)
Translates to: LAALSAGSIYLAGAKISSPPPSR*TSAPLW
Trigger: CCATAGAGGTGCTGATGTCCAGCGTGAAGGAGGAGG...TGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp TCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCTGATACCTGGCTCTCCAGGTCCTaGATAGTGTCAGGGAGCGGA +
Preference number: 4 (lower is better)
Translates to: SQQVPFIWPVLRSVHPDTWLSRS*IVSGSG
Trigger: TCCGCTCCCTGACACTATCCAGGACCTGGAGAGCCA...GGTATCAGGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp CACGCTCTGATTGGAGAAGAGGCAACTCCTTTCCAGGAGTCTTTGACTAAAGGGGGGCTCTGTATGTGGTaGGGTGAGATTGGAACCCAG +
Preference number: 4 (lower is better)
Translates to: HALIGEEATPFQESLTKGGLCMW*GEIGTQ
Trigger: CTGGGTTCCAATCTCACCCCACCACATACAGAGCCC...CCCTTTAGTCAAAGACTCCTGGAAAGGAGTTGCCTCTTCTCCAATCAGAGCGTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp GCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCATTAGGTGCTGCCCTTaGCATCTGGCAAAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: AALSAGSIYLAGAKISSPIRCCP*HLAKPE
Trigger: TTCTGGCTTTGCCAGATGTCAAGGGCAGCACCTAAT...GGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR TCA 90 bp CTGGCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCATGTCCAATAACCAGTTaGGTCAGTCCCTCAGTCCCG +
Preference number: 4 (lower is better)
Translates to: LAALSAGSIYLAGAKISSCPITS*VSPSVP
Trigger: CGGGACTGAGGGACTGACTCAACTGGTTATTGGACA...TGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377585.7
CDS-3UTR GCA 90 bp CACGCTCTGATTGGAGAAGAGGCAACTCCTTTCCAGGAGTCTTTGACTAAAGGGATGCAGAATGCCATCTaGTGTCATCCTTGCGGCACC +
Preference number: 4 (lower is better)
Translates to: HALIGEEATPFQESLTKGMQNAI*CHPCGT
Trigger: GGTGCCGCAAGGATGACAGCAGATGGCATTCTGCAT...CCCTTTAGTCAAAGACTCCTGGAAAGGAGTTGCCTCTTCTCCAATCAGAGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428570.1
CDS-3UTR CCA 90 bp GCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCTGGTCAGAAGGGCCTTaGGGGTCATGTTTGTGGAAA +
Preference number: 4 (lower is better)
Translates to: AALSAGSIYLAGAKISSPWSEGP*GSCLWK
Trigger: TTTCCACAAACATGACCCCCAAGGCCCTTCTGACCA...GGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp GACATGAGCCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATCTGAAGTGCTTGGTCTaGTTTGCCCTTAATAATCAG +
Preference number: 4 (lower is better)
Translates to: DMSLAGKGRGTVSLLVGHLKCLV*FALNNQ
Trigger: CTGATTATTAAGGGCAAACCAGACCAAGCACTTCAG...ATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGGCTCATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp CACGCTCTGATTGGAGAAGAGGCAACTCCTTTCCAGGAGTCTTTGACTAAAGGGAAGAGGAGTGAGCTGTaGAAGCTGCCTTCAGCCACA +
Preference number: 4 (lower is better)
Translates to: HALIGEEATPFQESLTKGKRSEL*KLPSAT
Trigger: TGTGGCTGAAGGCAGCTTCCACAGCTCACTCCTCTT...CCCTTTAGTCAAAGACTCCTGGAAAGGAGTTGCCTCTTCTCCAATCAGAGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp CTGGCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCAGTTATTGGTTGGGCATaGCCATCTGCACAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LAALSAGSIYLAGAKISSVIGWA*PSAQAP
Trigger: AGGAGCCTGTGCAGATGGCCATGCCCAACCAATAAC...TGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp CACGCTCTGATTGGAGAAGAGGCAACTCCTTTCCAGGAGTCTTTGACTAAAGGGCGTCTCGTTATTGGTTaGGCATGGCCATCTGCACAG +
Preference number: 4 (lower is better)
Translates to: HALIGEEATPFQESLTKGRLVIG*AWPSAQ
Trigger: CTGTGCAGATGGCCATGCCCAACCAATAACGAGACG...CCCTTTAGTCAAAGACTCCTGGAAAGGAGTTGCCTCTTCTCCAATCAGAGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp CTGGCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACTGGACACCTGTATCTaGCAGCTCTCTCAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: LAALSAGSIYLAGAKISSLDTCI*QLSQQV
Trigger: AACCTGCTGAGAGAGCTGCCAGATACAGGTGTCCAG...TGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR TCA 90 bp ATTGTGAGCCACTGGAGGGCTTTCAGCAGGGAGGGATTTGGTTTGGATTGCGTTTTCTCATTTCACAGATaGGGGCTCTGTATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: IVSHWRAFSREGFGLDCVFSFHR*GLCMWW
Trigger: CCACCACATACAGAGCCCTCATCTGTGAAATGAGAA...AACGCAATCCAAACCAAATCCCTCCCTGCTGAAAGCCCTCCAGTGGCTCACAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR GCA 90 bp CTGGCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCACTGTATGCAGAATaGCATCTGCTGTCATCCGCA +
Preference number: 4 (lower is better)
Translates to: LAALSAGSIYLAGAKISSPLYAE*HLLSSA
Trigger: TGCGGATGACAGCAGATGGCATTCTGCATACAGTGG...TGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CCA 90 bp CACGCTCTGATTGGAGAAGAGGCAACTCCTTTCCAGGAGTCTTTGACTAAAGGGTTCTCCAGGAGCATCTaGGAAGGTATCATGAGGCAG +
Preference number: 4 (lower is better)
Translates to: HALIGEEATPFQESLTKGFSRSI*EGIMRQ
Trigger: CTGCCTCATGATACCTTCCCAGATGCTCCTGGAGAA...CCCTTTAGTCAAAGACTCCTGGAAAGGAGTTGCCTCTTCTCCAATCAGAGCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp CTGGCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCATGGGGGTCATGTTTGTaGAAACCGCAGAGCCATTGT +
Preference number: 4 (lower is better)
Translates to: LAALSAGSIYLAGAKISSWGSCL*KPQSHC
Trigger: ACAATGGCTCTGCGGTTTCCACAAACATGACCCCCA...TGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp CTGGCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCTCCACGCTCTGATTaGAGAAGAGGCAACTCCTTT +
Preference number: 4 (lower is better)
Translates to: LAALSAGSIYLAGAKISSPPRSD*RRGNSF
Trigger: AAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGG...TGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
3UTR CAA 72 bp CTGGAGGGCTTTCAGCAGGGAGGGATTTGGTTTGGATaGCGTTTCTTAATAAGCATGGTGGCTGTTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LEGFQQGGIWFG*RFLISMVAVVQ
Trigger: CTGCACAACAGCCACCATGCTTATTAAGAAACGCAATCCAAACCAAATCCCTCCCTGCTGAAAGCCCTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR TCA 90 bp CACGCTCTGATTGGAGAAGAGGCAACTCCTTTCCAGGAGTCTTTGACTAAAGGGTTCTCATTTCACAGATaGGGGCTCTGTATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: HALIGEEATPFQESLTKGFSFHR*GLCMWW
Trigger: CCACCACATACAGAGCCCTCATCTGTGAAATGAGAA...CCCTTTAGTCAAAGACTCCTGGAAAGGAGTTGCCTCTTCTCCAATCAGAGCGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp TCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCTGATACCTGGGGGTCATGTTTGTaGAAACCGCAGAGCCATTGT +
Preference number: 4 (lower is better)
Translates to: SQQVPFIWPVLRSVHPDTWGSCL*KPQSHC
Trigger: ACAATGGCTCTGCGGTTTCCACAAACATGACCCCCA...GGTATCAGGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CCA 90 bp ACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCCTTTCCAGGAGTCTTTGCAGGTTCCATTTATTTaGCCGGTGCTAAGATCAGTT +
Preference number: 4 (lower is better)
Translates to: TRLHALIGEEATPFQESLQVPFI*PVLRSV
Trigger: AACTGATCTTAGCACCGGCCAAATAAATGGAACCTG...CAAAGACTCCTGGAAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR TCA 90 bp TCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCTGATACCTTCTCATTTCACAGATaGGGGCTCTGTATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: SQQVPFIWPVLRSVHPDTFSFHR*GLCMWW
Trigger: CCACCACATACAGAGCCCTCATCTGTGAAATGAGAA...GGTATCAGGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp GCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCCAGGTTCCATTTATTTaGCCGGTGCTAAGATCAGTT +
Preference number: 4 (lower is better)
Translates to: AALSAGSIYLAGAKISSPQVPFI*PVLRSV
Trigger: AACTGATCTTAGCACCGGCCAAATAAATGGAACCTG...GGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CCA 90 bp CACGCTCTGATTGGAGAAGAGGCAACTCCTTTCCAGGAGTCTTTGACTAAAGGGCAGGTTCCATTTATTTaGCCGGTGCTAAGATCAGTT +
Preference number: 4 (lower is better)
Translates to: HALIGEEATPFQESLTKGQVPFI*PVLRSV
Trigger: AACTGATCTTAGCACCGGCCAAATAAATGGAACCTG...CCCTTTAGTCAAAGACTCCTGGAAAGGAGTTGCCTCTTCTCCAATCAGAGCGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS TCA 90 bp CCATGGCCTGGGAACCCGCCTGGATGGTGCGGCGGCCAAGGAAACTaGGCAAGAGGGCAGTGGTGGCCCGGCCCAGGAAGTCCACGGCCC +
Preference number: 5 (lower is better)
Translates to: PWPGNPPGWCGGQGN*ARGQWWPGPGSPRP
Trigger: GGGCCGTGGACTTCCTGGGCCGGGCCACCACTGCCCTCTTGCTCAGTTTCCTTGGCCGCCGCACCATCCAGGCGGGTTCCCAGGCCATGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS CCA 90 bp GCAGTGGTGGCCCGGCCCAGGAAGTCCACGGCCCCGAAGAGGGCCTaGAGGAGGAAGATGTCACGGCCCAGGCTCTGCAGGTCGAAGACC +
Preference number: 5 (lower is better)
Translates to: AVVARPRKSTAPKRA*RRKMSRPRLCRSKT
Trigger: GGTCTTCGACCTGCAGAGCCTGGGCCGTGACATCTTCCTCCTCCAGGCCCTCTTCGGGGCCGTGGACTTCCTGGGCCGGGCCACCACTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp GCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCTGGCCCAGTGGCATGGAGGGTaGGAGACGAGGGCTAGGAGC +
Preference number: 5 (lower is better)
Translates to: AFSHSRRPRCPLGHGCLAQWHGG*ETRARS
Trigger: GCTCCTAGCCCTCGTCTCCAACCCTCCATGCCACTG...GGCCAGGCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CAA 90 bp TGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTCCGACCGCGGCTCCTTaGCAGAGGCCACCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: WKLPSATADGHAVHSATAPTAAP*QRPPPP
Trigger: AGGAGGAGGTGGCCTCTGCAAAGGAGCCGCGGTCGG...AGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CAA 90 bp TGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCACAGTGACGGCCTCTaGCCGGTTGCCCTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: CGSCLQPQQTATLSTRPRHSDGL*PVALGC
Trigger: GCAGCCCAGGGCAACCGGCAAGAGGCCGTCACTGTG...CCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS CCA 90 bp CTGCCTTGGGGAGGGACACCAGGACGGCGTACTTCACCACCAGCATaGCGCAGCTCCTCCAGCGGAGCACGGGCACGCAGAACAGGTCCA +
Preference number: 5 (lower is better)
Translates to: LPWGGTPGRRTSPPA*RSSSSGARARRTGP
Trigger: TGGACCTGTTCTGCGTGCCCGTGCTCCGCTGGAGGAGCTGCGCCATGCTGGTGGTGAAGTACGCCGTCCTGGTGTCCCTCCCCAAGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460745.1
ENST00000478051.5
CDS-3UTR CAA 90 bp GAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCTGCGGCACCAGCATGTaGGCTAGAATGGCGAGGCCG +
Preference number: 5 (lower is better)
Translates to: EAAFSHSRRPRCPLGHGCCGTSM*ARMARP
Trigger: CGGCCTCGCCATTCTAGCCAACATGCTGGTGCCGCA...GCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp AGCAGGGGCAGGGCTTGGCGGCTCATCAGGATCAGGGGACCCATCATAGCCCCCCAGCAGGGGCAGGGCTaGGCGGCTCATCAGGATCAG +
Preference number: 5 (lower is better)
Translates to: SRGRAWRLIRIRGPIIAPQQGQG*AAHQDQ
Trigger: CTGATCCTGATGAGCCGCCAAGCCCTGCCCCTGCTG...GGGGGCTATGATGGGTCCCCTGATCCTGATGAGCCGCCAAGCCCTGCCCCTGCT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000428570.1
CDS-3UTR CAA 90 bp TCGGCCACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCTGCCATGCCAGGCCCTaGAAGTCGCCCAACTCGCCT +
Preference number: 5 (lower is better)
Translates to: SATAAWPLPCQALEVAQLCHARP*KSPNSP
Trigger: AGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCA...GAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGTGGCCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS TCA 90 bp TGCCGGCCATCCCAAAAGCGGCCACGAACCGCAGGCCGCAGTAGATaGCGAATGTTGGGGCGAAGATGGTGCTGGTGCCCGCCACGGCCA +
Preference number: 5 (lower is better)
Translates to: CRPSQKRPRTAGRSR*RMLGRRWCWCPPRP
Trigger: TGGCCGTGGCGGGCACCAGCACCATCTTCGCCCCAACATTCGTCATCTACTGCGGCCTGCGGTTCGTGGCCGCTTTTGGGATGGCCGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000478051.5
ENST00000490834.5
CDS CCA 90 bp TGCGGCACCAGCATGTTGGCTAGAATGGCGAGGCCGGCCATGGCCTaGGAACCCGCCTGGATGGTGCGGCGGCCAAGGAAACTGAGCAAG +
Preference number: 5 (lower is better)
Translates to: CGTSMLARMARPAMA*EPAWMVRRPRKLSK
Trigger: CTTGCTCAGTTTCCTTGGCCGCCGCACCATCCAGGCGGGTTCCCAGGCCATGGCCGGCCTCGCCATTCTAGCCAACATGCTGGTGCCGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp AGAGGAGTGAGCTGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCCACAGTGACGGCCTCTaGCCGGTTGCCCTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: RGVSCGSCLQPQQTATLSHSDGL*PVALGC
Trigger: GCAGCCCAGGGCAACCGGCAAGAGGCCGTCACTGTG...GGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACTCCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp GCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGCCTGGCCTGTGGTGGGGTGAGATaGGAACCCAGTCTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: AFSHSRRPRCPLGHGCLACGGVR*EPSLWL
Trigger: CAACCAGAGACTGGGTTCCAATCTCACCCCACCACA...GGCCAGGCAGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS CCA 90 bp CCCAAAAGCGGCCACGAACCGCAGGCCGCAGTAGATGACGAATGTTaGGGCGAAGATGGTGCTGGTGCCCGCCACGGCCAACTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: PKSGHEPQAAVDDEC*GEDGAGARHGQLQA
Trigger: TGCCTGCAGTTGGCCGTGGCGGGCACCAGCACCATCTTCGCCCCAACATTCGTCATCTACTGCGGCCTGCGGTTCGTGGCCGCTTTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000478051.5
ENST00000490834.5
CDS CCA 90 bp ATGTTGGCTAGAATGGCGAGGCCGGCCATGGCCTGGGAACCCGCCTaGATGGTGCGGCGGCCAAGGAAACTGAGCAAGAGGGCAGTGGTG +
Preference number: 5 (lower is better)
Translates to: MLARMARPAMAWEPA*MVRRPRKLSKRAVV
Trigger: CACCACTGCCCTCTTGCTCAGTTTCCTTGGCCGCCGCACCATCCAGGCGGGTTCCCAGGCCATGGCCGGCCTCGCCATTCTAGCCAACAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp TTGCCCCACCCCCTTTGTGCTCCAAAGCTGCCTTCCTGCAGCCCTGGCTGCTCGGCCCACGCCTCCGGCTaGCTCCAAGAGCTTCGAGAA +
Preference number: 5 (lower is better)
Translates to: LPHPLCAPKLPSCSPGCSAHASG*LQELRE
Trigger: TTCTCGAAGCTCTTGGAGCAAGCCGGAGGCGTGGGC...CGAGCAGCCAGGGCTGCAGGAAGGCAGCTTTGGAGCACAAAGGGGGTGGGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CAA 90 bp GCTAGGAGCCTCCTGTGCTGGAAAGAGCCCTGGGCTAGGATCAGGGCCGGGTTCCACACCAGGTCCCACTaGGCCACGATGGTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: ARSLLCWKEPWARIRAGFHTRSH*ATMVEV
Trigger: CACCTCCACCATCGTGGCCAAGTGGGACCTGGTGTG...GAACCCGGCCCTGATCCTAGCCCAGGGCTCTTTCCAGCACAGGAGGCTCCTAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CAA 90 bp ACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCTGCCCTGGGCTGCTGTaGATTTCTGGCTCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: TAAWPLPCQALEVAQLASCPGLL*ISGSPG
Trigger: ACCTGGAGAGCCAGAAATCAACAGCAGCCCAGGGCA...GGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp GATCCTCAGTGCACCCCGCCCCATGCCTCAGTGCAGCGTCATCTTCGTGGGCTCACGGCCTCTTGCCGGTaGCCCTGGGCTGCTGTTGAT +
Preference number: 5 (lower is better)
Translates to: DPQCTPPHASVQRHLRGLTASCR*PWAAVD
Trigger: ATCAACAGCAGCCCAGGGCAACCGGCAAGAGGCCGT...GAGCCCACGAAGATGACGCTGCACTGAGGCATGGGGCGGGGTGCACTGAGGATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CAA 90 bp TGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTAAGGTGGGGAACGGCCTCTTGCCGGTaGCCCTGGGCTGCTGTTGAT +
Preference number: 5 (lower is better)
Translates to: WLGMAICTGSCRARVRWGTASCR*PWAAVD
Trigger: ATCAACAGCAGCCCAGGGCAACCGGCAAGAGGCCGT...TCCCCACCTTACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp TTGCCCCACCCCCTTTGTGCTCCAAAGCTGCCTTCCTGCAGCCCTGGCTGCTCGTGCCATGCCAGGCCCTaGAAGTCGCCCAACTCGCCT +
Preference number: 5 (lower is better)
Translates to: LPHPLCAPKLPSCSPGCSCHARP*KSPNSP
Trigger: AGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCA...CGAGCAGCCAGGGCTGCAGGAAGGCAGCTTTGGAGCACAAAGGGGGTGGGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CAA 90 bp TTGCCCCACCCCCTTTGTGCTCCAAAGCTGCCTTCCTGCAGCCCTGGCTGCTCGGAGAGGACACAGCCTTaGCTAGGGTGGGTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LPHPLCAPKLPSCSPGCSERTQP*LGWVVG
Trigger: CCCCACCACCCACCCTAGCAAAGGCTGTGTCCTCTC...CGAGCAGCCAGGGCTGCAGGAAGGCAGCTTTGGAGCACAAAGGGGGTGGGGCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS CCA 90 bp CAGGATATCAGGGAGATGGCAAAGAAGGGCACTGATGCTGCCAGCTaGAGAGTCCTCCAGTCCCGCAGGGCAAAGGCCAGGCCGCCCAGC +
Preference number: 5 (lower is better)
Translates to: QDIREMAKKGTDAAS*RVLQSRRAKARPPS
Trigger: GCTGGGCGGCCTGGCCTTTGCCCTGCGGGACTGGAGGACTCTCCAGCTGGCAGCATCAGTGCCCTTCTTTGCCATCTCCCTGATATCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000460745.1
ENST00000478051.5
ENST00000490834.5
CDS-3UTR CAA 90 bp TGCAGCCCTGGCTGCTCGCTCGGATCCTCAGTGCACCCCGCCCCATGCCTCAGTGAAACCGCAGAGCCATaGTCCAGCATGTGTGTCCAG +
Preference number: 5 (lower is better)
Translates to: CSPGCSLGSSVHPAPCLSETAEP*SSMCVQ
Trigger: CTGGACACACATGCTGGACAATGGCTCTGCGGTTTC...ACTGAGGCATGGGGCGGGGTGCACTGAGGATCCGAGCGAGCAGCCAGGGCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CAA 90 bp CTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCCGACCGCGGCTCCTTaGCAGAGGCCACCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: LAGKGRGTVSLLVGHGHLPTAAP*QRPPPP
Trigger: AGGAGGAGGTGGCCTCTGCAAAGGAGCCGCGGTCGG...CAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CAA 90 bp GACATCTGGCAAAGCCAGAAGGCCTTGGCAGGCCTGCCTGTGAGCTCCCCTTCTCAGCAGGGGCAGGGCTaGGCGGCTCATCAGGATCAG +
Preference number: 5 (lower is better)
Translates to: DIWQSQKALAGLPVSSPSQQGQG*AAHQDQ
Trigger: CTGATCCTGATGAGCCGCCAAGCCCTGCCCCTGCTG...AGAAGGGGAGCTCACAGGCAGGCCTGCCAAGGCCTTCTGGCTTTGCCAGATGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CAA 90 bp TGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCCACAGTGACGGCCTCTaGCCGGTTGCCCTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: WQGKGGEPSRYWLGMAICHSDGL*PVALGC
Trigger: GCAGCCCAGGGCAACCGGCAAGAGGCCGTCACTGTG...GCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp GGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCACAGTGACGGCCTCTaGCCGGTTGCCCTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: GNRLVIGWAWPSAQAPVGHSDGL*PVALGC
Trigger: GCAGCCCAGGGCAACCGGCAAGAGGCCGTCACTGTG...CCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp ACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCCCGTCTCGTTATTGGTaGGGCATGGCCATCTGCACA +
Preference number: 5 (lower is better)
Translates to: TAAWPLPCQALEVAQLASPSRYW*GMAICT
Trigger: TGTGCAGATGGCCATGCCCAACCAATAACGAGACGG...GGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp TGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGAACCCAGTCTCTGGTaGGCGTGGCTGAGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: WKLPSATADGHAVHSATAEPSLW*AWLSEG
Trigger: ACCTTCACTCAGCCACGCCAACCAGAGACTGGGTTC...AGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp ACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCTGTGGTGGGGTGAGATaGGAACCCAGTCTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: TAAWPLPCQALEVAQLASCGGVR*EPSLWL
Trigger: CAACCAGAGACTGGGTTCCAATCTCACCCCACCACA...GGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp TGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGAAACCGCAGAGCCATaGTCCAGCATGTGTGTCCAG +
Preference number: 5 (lower is better)
Translates to: WKLPSATADGHAVHSATAETAEP*SSMCVQ
Trigger: CTGGACACACATGCTGGACAATGGCTCTGCGGTTTC...AGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CAA 90 bp CTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCAGCAGGGGCAGGGCTaGGCGGCTCATCAGGATCAG +
Preference number: 5 (lower is better)
Translates to: LAGKGRGTVSLLVGHGHLQQGQG*AAHQDQ
Trigger: CTGATCCTGATGAGCCGCCAAGCCCTGCCCCTGCTG...CAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377585.7
ENST00000428570.1
CDS-3UTR CAA 90 bp TGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGCTGGAACCGTCTCGTTATaGGTTGGGCATGGCCATCTG +
Preference number: 5 (lower is better)
Translates to: WKLPSATADGHAVHSATAGTVSL*VGHGHL
Trigger: CAGATGGCCATGCCCAACCAATAACGAGACGGTTCC...AGCCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp AGAGGAGTGAGCTGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCGTTGCCCCACCCCCTTaGTGCTCCAAAGCTGCCTTC +
Preference number: 5 (lower is better)
Translates to: RGVSCGSCLQPQQTATLSVAPPP*CSKAAF
Trigger: GAAGGCAGCTTTGGAGCACAAAGGGGGTGGGGCAAC...GGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACTCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CAA 90 bp TGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGGGTGAAAGAGGTGAGTaGAGGGGCCTGAGATTGAGG +
Preference number: 5 (lower is better)
Translates to: CGSCLQPQQTATLSTRPRGERGE*RGLRLR
Trigger: CCTCAATCTCAGGCCCCTCAACTCACCTCTTTCACC...CCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS GCA 90 bp ATCTGGGAAGGTATCATGAGGCAGGGGAGGATGAAGGTGAGCACCTaGAGGGTCTGGAAGAGGCCCACGCCTCCGGCTTGCTCCAAGAGC +
Preference number: 5 (lower is better)
Translates to: IWEGIMRQGRMKVST*RVWKRPTPPACSKS
Trigger: GCTCTTGGAGCAAGCCGGAGGCGTGGGCCTCTTCCAGACCCTGCAGGTGCTCACCTTCATCCTCCCCTGCCTCATGATACCTTCCCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000478051.5
ENST00000490834.5
CDS CCA 90 bp GGTATCATGAGGCAGGGGAGGATGAAGGTGAGCACCTGCAGGGTCTaGAAGAGGCCCACGCCTCCGGCTTGCTCCAAGAGCTTCGAGAAC +
Preference number: 5 (lower is better)
Translates to: GIMRQGRMKVSTCRV*KRPTPPACSKSFEN
Trigger: GTTCTCGAAGCTCTTGGAGCAAGCCGGAGGCGTGGGCCTCTTCCAGACCCTGCAGGTGCTCACCTTCATCCTCCCCTGCCTCATGATACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000478051.5
ENST00000490834.5
CDS-3UTR CAA 90 bp CTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGGCCCACGCCTCCGGCTaGCTCCAAGAGCTTCGAGAA +
Preference number: 5 (lower is better)
Translates to: LAGKGRGTVSLLVGHGHLAHASG*LQELRE
Trigger: TTCTCGAAGCTCTTGGAGCAAGCCGGAGGCGTGGGC...CAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CAA 90 bp CATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGCCCACGCCTCCGGCTaGCTCCAAGAGCTTCGAGAA +
Preference number: 5 (lower is better)
Translates to: HARPLKSPNSPPRSDWRRAHASG*LQELRE
Trigger: TTCTCGAAGCTCTTGGAGCAAGCCGGAGGCGTGGGC...TCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CAA 90 bp TGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGCCACGGATGGTCAGAAGGGCCTaGGGGGTCATGTTTGTGGAA +
Preference number: 5 (lower is better)
Translates to: CGSCLQPQQTATLSTRPRMVRRA*GVMFVE
Trigger: TTCCACAAACATGACCCCCAAGGCCCTTCTGACCAT...CCGTGGCCGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CAA 90 bp CCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTCACACCAGGTCCCACTaGGCCACGATGGTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: PGREREGNRLVIGWAWPSHTRSH*ATMVEV
Trigger: CACCTCCACCATCGTGGCCAAGTGGGACCTGGTGTG...AGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CAA 90 bp AGAGGAGTGAGCTGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCCAGGGTCTGCAAATCTaGCGGCACCAGCATGTTGGC +
Preference number: 5 (lower is better)
Translates to: RGVSCGSCLQPQQTATLSQGLQI*RHQHVG
Trigger: GCCAACATGCTGGTGCCGCAAGATTTGCAGACCCTG...GGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACTCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
CDS-3UTR CAA 90 bp TGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACGGCCTCTTGCCGGTaGCCCTGGGCTGCTGTTGAT +
Preference number: 5 (lower is better)
Translates to: WQGKGGEPSRYWLGMAICTASCR*PWAAVD
Trigger: ATCAACAGCAGCCCAGGGCAACCGGCAAGAGGCCGT...GCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp TCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTAACGGCCTCTTGCCGGTaGCCCTGGGCTGCTGTTGAT +
Preference number: 5 (lower is better)
Translates to: SRYWLGMAICTGSCRARVTASCR*PWAAVD
Trigger: ATCAACAGCAGCCCAGGGCAACCGGCAAGAGGCCGT...TACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp AGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTGCCATGCCAGGCCCTaGAAGTCGCCCAACTCGCCT +
Preference number: 5 (lower is better)
Translates to: RPLKSPNSPPRSDWRRGNCHARP*KSPNSP
Trigger: AGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCA...GTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp AGAGGAGTGAGCTGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCGAACCCAGTCTCTGGTaGGCGTGGCTGAGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: RGVSCGSCLQPQQTATLSEPSLW*AWLSEG
Trigger: ACCTTCACTCAGCCACGCCAACCAGAGACTGGGTTC...GGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACTCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp GATCCTCAGTGCACCCCGCCCCATGCCTCAGTGCAGCGTCATCTTCGTGGGCTCTGTGGTGGGGTGAGATaGGAACCCAGTCTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: DPQCTPPHASVQRHLRGLCGGVR*EPSLWL
Trigger: CAACCAGAGACTGGGTTCCAATCTCACCCCACCACA...GAGCCCACGAAGATGACGCTGCACTGAGGCATGGGGCGGGGTGCACTGAGGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CAA 90 bp ACCACTCTGCACTTTTGCTTCCTTGCCCATCTGAGATGGGCAGCCGGCCTCGACCAAAGCCAGAAGGCCTaGGCAGGCCTGCCTGTGAGC +
Preference number: 5 (lower is better)
Translates to: TTLHFCFLAHLRWAAGLDQSQKA*AGLPVS
Trigger: GCTCACAGGCAGGCCTGCCAAGGCCTTCTGGCTTTG...GTCGAGGCCGGCTGCCCATCTCAGATGGGCAAGGAAGCAAAAGTGCAGAGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS TCA 90 bp TTCTGGCAGCCACCAGGATATCAGGGAGATGGCAAAGAAGGGCACTaGTGCTGCCAGCTGGAGAGTCCTCCAGTCCCGCAGGGCAAAGGC +
Preference number: 5 (lower is better)
Translates to: FWQPPGYQGDGKEGH*CCQLESPPVPQGKG
Trigger: GCCTTTGCCCTGCGGGACTGGAGGACTCTCCAGCTGGCAGCATCAGTGCCCTTCTTTGCCATCTCCCTGATATCCTGGTGGCTGCCAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000460745.1
CDS GCA 90 bp GATTGCAGCCACAAGATCCAGGGCCACCAAGACCTTCTGCCTTCCTaGCCCTCAGCCGGATTGGGGGTGGGGCACTGTCCAATAACCAGT +
Preference number: 5 (lower is better)
Translates to: DCSHKIQGHQDLLPS*PSAGLGVGHCPITS
Trigger: ACTGGTTATTGGACAGTGCCCCACCCCCAATCCGGCTGAGGGGCAGGAAGGCAGAAGGTCTTGGTGGCCCTGGATCTTGTGGCTGCAATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377585.7
CDS-3UTR CAA 90 bp GGTGGGGTGAGATTGGAACCCAGTCTCTGGTTGGCGTGGCTGAGTGAAGGTGTATGCGGCACCAGCATGTaGGCTAGAATGGCGAGGCCG +
Preference number: 5 (lower is better)
Translates to: GGVRLEPSLWLAWLSEGVCGTSM*ARMARP
Trigger: CGGCCTCGCCATTCTAGCCAACATGCTGGTGCCGCA...TACACCTTCACTCAGCCACGCCAACCAGAGACTGGGTTCCAATCTCACCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp TGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGCCCGGGTAAGGTGGGGATCATCCGCACTGGCGTaGGAAAGAGTTCAGCCTTGT +
Preference number: 5 (lower is better)
Translates to: WLGMAICTGSCRARVRWGSSALA*ERVQPC
Trigger: ACAAGGCTGAACTCTTTCCAACGCCAGTGCGGATGA...TCCCCACCTTACCCGGGCCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CAA 90 bp GGTGGGGTGAGATTGGAACCCAGTCTCTGGTTGGCGTGGCTGAGTGAAGGTGTAACGGCCTCTTGCCGGTaGCCCTGGGCTGCTGTTGAT +
Preference number: 5 (lower is better)
Translates to: GGVRLEPSLWLAWLSEGVTASCR*PWAAVD
Trigger: ATCAACAGCAGCCCAGGGCAACCGGCAAGAGGCCGT...TACACCTTCACTCAGCCACGCCAACCAGAGACTGGGTTCCAATCTCACCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp AGTGAGCTGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGGGAACCGTCTCGTTATaGGTTGGGCATGGCCATCTG +
Preference number: 5 (lower is better)
Translates to: SELWKLPSATADGHAVHSGTVSL*VGHGHL
Trigger: CAGATGGCCATGCCCAACCAATAACGAGACGGTTCC...CGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp TCGGCCACGGCTGCCTGGCCTCTGCCATGCCAGGCCCTTGAAGTCGCCCAACTCGCAGGTTCCATTTATTaGGCCGGTGCTAAGATCAGT +
Preference number: 5 (lower is better)
Translates to: SATAAWPLPCQALEVAQLAGSIY*AGAKIS
Trigger: ACTGATCTTAGCACCGGCCAAATAAATGGAACCTGC...GAGTTGGGCGACTTCAAGGGCCTGGCATGGCAGAGGCCAGGCAGCCGTGGCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp CATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGATGCCCTGGGCTGCTGTaGATTTCCGCACTGGCGTTG +
Preference number: 5 (lower is better)
Translates to: HARPLKSPNSPPRSDWRRCPGLL*ISALAL
Trigger: CAACGCCAGTGCGGAAATCAACAGCAGCCCAGGGCA...TCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377581.7
CDS TCA 90 bp TGGACATCAGCACCAGGATATCAGGGAGATGGCAAAGAAGGGCACTaGTGCTGCCAGCTGGAGAGTCCTCCAGTCCCGCAGGGCAAAGGC +
Preference number: 5 (lower is better)
Translates to: WTSAPGYQGDGKEGH*CCQLESPPVPQGKG
Trigger: GCCTTTGCCCTGCGGGACTGGAGGACTCTCCAGCTGGCAGCATCAGTGCCCTTCTTTGCCATCTCCCTGATATCCTGGTGCTGATGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478051.5
ENST00000490834.5
CDS GCA 90 bp TGGTCGTGGTCCACTCCACCATCAGTGTCAGTGAACTCAGAAAGATaGCGGCCATCCCAAAAGCGGCCACGAACCGCAGGCCGCAGTAGA +
Preference number: 5 (lower is better)
Translates to: WSWSTPPSVSVNSER*RPSQKRPRTAGRSR
Trigger: TCTACTGCGGCCTGCGGTTCGTGGCCGCTTTTGGGATGGCCGGCATCTTTCTGAGTTCACTGACACTGATGGTGGAGTGGACCACGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000460745.1
ENST00000478051.5
ENST00000490834.5
CDS-3UTR CAA 90 bp AGTGAGCTGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGATGGTCAGAAGGGCCTaGGGGGTCATGTTTGTGGAA +
Preference number: 5 (lower is better)
Translates to: SELWKLPSATADGHAVHSMVRRA*GVMFVE
Trigger: TTCCACAAACATGACCCCCAAGGCCCTTCTGACCAT...CGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CAA 90 bp GCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCCCGACCGCGGCTCCTTaGCAGAGGCCACCTCCTCCT +
Preference number: 5 (lower is better)
Translates to: AALSAGSIYLAGAKISSPPTAAP*QRPPPP
Trigger: AGGAGGAGGTGGCCTCTGCAAAGGAGCCGCGGTCGG...GGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CAA 90 bp CCAGGGAAGGGCATGAGGGTAACTTTGTGGCAGGGCCACAGATATCAGTGGCATTGCGGCACCAGCATGTaGGCTAGAATGGCGAGGCCG +
Preference number: 5 (lower is better)
Translates to: PGKGMRVTLWQGHRYQWHCGTSM*ARMARP
Trigger: CGGCCTCGCCATTCTAGCCAACATGCTGGTGCCGCA...ATGCCACTGATATCTGTGGCCCTGCCACAAAGTTACCCTCATGCCCTTCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CAA 90 bp CCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTTGCCCTGGGCTGCTGTaGATTTCTGGCTCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: PGREREGNRLVIGWAWPSCPGLL*ISGSPG
Trigger: ACCTGGAGAGCCAGAAATCAACAGCAGCCCAGGGCA...AGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp AGTGAGCTGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGCCTTTCCAGGAGTCTTaGACTAAAGGGGCTCCATGC +
Preference number: 5 (lower is better)
Translates to: SELWKLPSATADGHAVHSPFQES*TKGAPC
Trigger: GCATGGAGCCCCTTTAGTCAAAGACTCCTGGAAAGG...CGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp AGAGGAGTGAGCTGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCCCTTTCCAGGAGTCTTaGACTAAAGGGGCTCCATGC +
Preference number: 5 (lower is better)
Translates to: RGVSCGSCLQPQQTATLSPFQES*TKGAPC
Trigger: GCATGGAGCCCCTTTAGTCAAAGACTCCTGGAAAGG...GGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp TTGGCTGCGTGCCTCGGGCCAGTGCACAACCTGGACACCTGTATCTGGCAGCTCGGCATGAGGGTAACTTaGTGGCAGGGCCACAGATAT +
Preference number: 5 (lower is better)
Translates to: LAACLGPVHNLDTCIWQLGMRVT*WQGHRY
Trigger: ATATCTGTGGCCCTGCCACAAAGTTACCCTCATGCC...GAGCTGCCAGATACAGGTGTCCAGGTTGTGCACTGGCCCGAGGCACGCAGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CAA 90 bp CATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGACATCTGCTGTCATCCTaGCGGCACCAGCATGTTGGC +
Preference number: 5 (lower is better)
Translates to: HARPLKSPNSPPRSDWRRHLLSS*RHQHVG
Trigger: GCCAACATGCTGGTGCCGCAAGGATGACAGCAGATG...TCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428570.1
CDS TCA 90 bp GGGCTCCATGCAGGCACAATTTCTAGAGCGAGGTACTTTCCACAGTaGCGGCCTCTTGCCGGTTGCCCTGGGCTGCTGTTGATTTCCGCA +
Preference number: 5 (lower is better)
Translates to: GLHAGTISRARYFPQ*RPLAGCPGLLLISA
Trigger: TGCGGAAATCAACAGCAGCCCAGGGCAACCGGCAAGAGGCCGTCACTGTGGAAAGTACCTCGCTCTAGAAATTGTGCCTGCATGGAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377581.7
CDS CCA 90 bp CTGGCGGGATGGAGATGGTCAGAAGGGCCTTGGGGGTCATGTTTGTaGAAACCGCAGAGCCATTGTCCAGCATGTGTGTCCAGCATCGGT +
Preference number: 5 (lower is better)
Translates to: LAGWRWSEGPWGSCL*KPQSHCPACVSSIG
Trigger: ACCGATGCTGGACACACATGCTGGACAATGGCTCTGCGGTTTCCACAAACATGACCCCCAAGGCCCTTCTGACCATCTCCATCCCGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000478051.5
ENST00000490834.5
CDS-3UTR CAA 90 bp GGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACCTTGGGGGTCATGTTaGTGGAAACCGCAGAGCCAT +
Preference number: 5 (lower is better)
Translates to: GREREGNRLVIGWAWPSAPWGSC*WKPQSH
Trigger: ATGGCTCTGCGGTTTCCACAAACATGACCCCCAAGG...TGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CAA 90 bp CATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGACCTTGGGGGTCATGTTaGTGGAAACCGCAGAGCCAT +
Preference number: 5 (lower is better)
Translates to: HARPLKSPNSPPRSDWRRPWGSC*WKPQSH
Trigger: ATGGCTCTGCGGTTTCCACAAACATGACCCCCAAGG...TCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CAA 90 bp GGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCAAGGTTCTTGGCCTCCTaGTGGCCATTTATCCTGGCC +
Preference number: 5 (lower is better)
Translates to: GREREGNRLVIGWAWPSARFLAS*WPFILA
Trigger: GGCCAGGATAAATGGCCACAAGGAGGCCAAGAACCT...TGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CAA 90 bp CATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAAGGTTCTTGGCCTCCTaGTGGCCATTTATCCTGGCC +
Preference number: 5 (lower is better)
Translates to: HARPLKSPNSPPRSDWRRRFLAS*WPFILA
Trigger: GGCCAGGATAAATGGCCACAAGGAGGCCAAGAACCT...TCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CAA 90 bp AGTGAGCTGTGGAAGCTGCCTTCAGCCACAGCAGACGGCCACGCTGTCCACTCGTCTATGGTCAGGTTCTaGGCCTCCTTGTGGCCATTT +
Preference number: 5 (lower is better)
Translates to: SELWKLPSATADGHAVHSSMVRF*ASLWPF
Trigger: AAATGGCCACAAGGAGGCCAAGAACCTGACCATAGA...CGAGTGGACAGCGTGGCCGTCTGCTGTGGCTGAAGGCAGCTTCCACAGCTCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CAA 90 bp ACAGATATCAGTGGCATGGAGGGTTGGAGACGAGGGCTAGGAGCCTCCTGTGCTCAGGGTCTGCAAATCTaGCGGCACCAGCATGTTGGC +
Preference number: 5 (lower is better)
Translates to: TDISGMEGWRRGLGASCAQGLQI*RHQHVG
Trigger: GCCAACATGCTGGTGCCGCAAGATTTGCAGACCCTG...AGCACAGGAGGCTCCTAGCCCTCGTCTCCAACCCTCCATGCCACTGATATCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CAA 90 bp CTGGCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACACAGTGACGGCCTCTaGCCGGTTGCCCTGGGCTGC +
Preference number: 5 (lower is better)
Translates to: LAALSAGSIYLAGAKISSHSDGL*PVALGC
Trigger: GCAGCCCAGGGCAACCGGCAAGAGGCCGTCACTGTG...TGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp ACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCCTTTCCAGGAGTCTTTGTGCCATGCCAGGCCCTaGAAGTCGCCCAACTCGCCT +
Preference number: 5 (lower is better)
Translates to: TRLHALIGEEATPFQESLCHARP*KSPNSP
Trigger: AGGCGAGTTGGGCGACTTCAAGGGCCTGGCATGGCA...CAAAGACTCCTGGAAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp CCTGGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTCCGTCTCGTTATTGGTaGGGCATGGCCATCTGCACA +
Preference number: 5 (lower is better)
Translates to: PGREREGNRLVIGWAWPSPSRYW*GMAICT
Trigger: TGTGCAGATGGCCATGCCCAACCAATAACGAGACGG...AGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp AGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACGGAACCGTCTCGTTATaGGTTGGGCATGGCCATCTG +
Preference number: 5 (lower is better)
Translates to: RPLKSPNSPPRSDWRRGNGTVSL*VGHGHL
Trigger: CAGATGGCCATGCCCAACCAATAACGAGACGGTTCC...GTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp GGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCATGTGGTGGGGTGAGATaGGAACCCAGTCTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: GREREGNRLVIGWAWPSACGGVR*EPSLWL
Trigger: CAACCAGAGACTGGGTTCCAATCTCACCCCACCACA...TGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp GGCAGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCATCCTCTGTCTGGTGTTaGGTGGTGTGTTTGGCCGTC +
Preference number: 5 (lower is better)
Translates to: GREREGNRLVIGWAWPSASSVWC*VVCLAV
Trigger: GACGGCCAAACACACCACCAAACACCAGACAGAGGA...TGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CAA 90 bp ACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCCTTTCCAGGAGTCTTTGTTGAGGGGCCTGAGATaGAGGTGGCCCAGAGTGGGG +
Preference number: 5 (lower is better)
Translates to: TRLHALIGEEATPFQESLLRGLR*RWPRVG
Trigger: CCCCACTCTGGGCCACCTCAATCTCAGGCCCCTCAA...CAAAGACTCCTGGAAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CAA 90 bp GTGCCTCGGGCCAGTGCACAACCTGGACACCTGTATCTGGCAGCTCTCTCAGCAACATCAGGGACCAGTTaGGAGCTACAACCGTGGTGT +
Preference number: 5 (lower is better)
Translates to: VPRASAQPGHLYLAALSATSGTS*ELQPWC
Trigger: ACACCACGGTTGTAGCTCCAAACTGGTCCCTGATGT...TGCTGAGAGAGCTGCCAGATACAGGTGTCCAGGTTGTGCACTGGCCCGAGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS CCA 90 bp AACAGAGCTGCCTCGGCTGAGCGGACTGCTGACCTAACTGCTGTTTaGAACCGATTGCAGCCACAAGATCCAGGGCCACCAAGACCTTCT +
Preference number: 5 (lower is better)
Translates to: NRAASAERTADLTAV*NRLQPQDPGPPRPS
Trigger: AGAAGGTCTTGGTGGCCCTGGATCTTGTGGCTGCAATCGGTTCCAAACAGCAGTTAGGTCAGCAGTCCGCTCAGCCGAGGCAGCTCTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377585.7
CDS-3UTR CAA 90 bp GTGCCTCGGGCCAGTGCACAACCTGGACACCTGTATCTGGCAGCTCTCTCAGCATCTATGGTCAGGTTCTaGGCCTCCTTGTGGCCATTT +
Preference number: 5 (lower is better)
Translates to: VPRASAQPGHLYLAALSASMVRF*ASLWPF
Trigger: AAATGGCCACAAGGAGGCCAAGAACCTGACCATAGA...TGCTGAGAGAGCTGCCAGATACAGGTGTCCAGGTTGTGCACTGGCCCGAGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CAA 90 bp CCAGGGAAGGGCATGAGGGTAACTTTGTGGCAGGGCCACAGATATCAGTGGCATTGCCCTGGGCTGCTGTaGATTTCTGGCTCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: PGKGMRVTLWQGHRYQWHCPGLL*ISGSPG
Trigger: ACCTGGAGAGCCAGAAATCAACAGCAGCCCAGGGCA...ATGCCACTGATATCTGTGGCCCTGCCACAAAGTTACCCTCATGCCCTTCCCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CAA 90 bp GGTGGGGTGAGATTGGAACCCAGTCTCTGGTTGGCGTGGCTGAGTGAAGGTGTATGTGGTGGGGTGAGATaGGAACCCAGTCTCTGGTTG +
Preference number: 5 (lower is better)
Translates to: GGVRLEPSLWLAWLSEGVCGGVR*EPSLWL
Trigger: CAACCAGAGACTGGGTTCCAATCTCACCCCACCACA...TACACCTTCACTCAGCCACGCCAACCAGAGACTGGGTTCCAATCTCACCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp TTGGCTGCGTGCCTCGGGCCAGTGCACAACCTGGACACCTGTATCTGGCAGCTCTCAGCAGGGAGGGATTaGGTTTGGATTGCGTTTCTT +
Preference number: 5 (lower is better)
Translates to: LAACLGPVHNLDTCIWQLSAGRD*VWIAFL
Trigger: AAGAAACGCAATCCAAACCAAATCCCTCCCTGCTGA...GAGCTGCCAGATACAGGTGTCCAGGTTGTGCACTGGCCCGAGGCACGCAGCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CAA 90 bp AGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACCTGTCCAATAACCAGTaGAGTCAGTCCCTCAGTCCC +
Preference number: 5 (lower is better)
Translates to: RPLKSPNSPPRSDWRRGNLSNNQ*SQSLSP
Trigger: GGGACTGAGGGACTGACTCAACTGGTTATTGGACAG...GTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377585.7
CDS-3UTR CAA 90 bp GGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGTCTATGGTCAGGTTCTaGGCCTCCTTGTGGCCATTT +
Preference number: 5 (lower is better)
Translates to: GNRLVIGWAWPSAQAPVGSMVRF*ASLWPF
Trigger: AAATGGCCACAAGGAGGCCAAGAACCTGACCATAGA...CCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CAA 90 bp GGTGGGGTGAGATTGGAACCCAGTCTCTGGTTGGCGTGGCTGAGTGAAGGTGTACCTTTCCAGGAGTCTTaGACTAAAGGGGCTCCATGC +
Preference number: 5 (lower is better)
Translates to: GGVRLEPSLWLAWLSEGVPFQES*TKGAPC
Trigger: GCATGGAGCCCCTTTAGTCAAAGACTCCTGGAAAGG...TACACCTTCACTCAGCCACGCCAACCAGAGACTGGGTTCCAATCTCACCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp ACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCCTTTCCAGGAGTCTTTGGAACCCAGTCTCTGGTaGGCGTGGCTGAGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: TRLHALIGEEATPFQESLEPSLW*AWLSEG
Trigger: ACCTTCACTCAGCCACGCCAACCAGAGACTGGGTTC...CAAAGACTCCTGGAAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp ACAGATATCAGTGGCATGGAGGGTTGGAGACGAGGGCTAGGAGCCTCCTGTGCTCACCACTCTGCACTTTaGCTTCCTTGCCCATCTGAG +
Preference number: 5 (lower is better)
Translates to: TDISGMEGWRRGLGASCAHHSAL*LPCPSE
Trigger: CTCAGATGGGCAAGGAAGCAAAAGTGCAGAGTGGTG...AGCACAGGAGGCTCCTAGCCCTCGTCTCCAACCCTCCATGCCACTGATATCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS CCA 90 bp GCCATTTATCCTGGCCACCTTTCTGAGCTCCTGAAGTGCTTGGTCTaGTTTGCCCTTAATAATCAGCCACCGGGCGGATTCTGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: AIYPGHLSELLKCLV*FALNNQPPGGFWQP
Trigger: TGGCTGCCAGAATCCGCCCGGTGGCTGATTATTAAGGGCAAACCAGACCAAGCACTTCAGGAGCTCAGAAAGGTGGCCAGGATAAATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000460745.1
CDS-3UTR CAA 90 bp TCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCTGATACCCACACCAGGTCCCACTaGGCCACGATGGTGGAGGTG +
Preference number: 5 (lower is better)
Translates to: SQQVPFIWPVLRSVHPDTHTRSH*ATMVEV
Trigger: CACCTCCACCATCGTGGCCAAGTGGGACCTGGTGTG...GGTATCAGGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CAA 90 bp GGGCCAGTGCACAACCTGGACACCTGTATCTGGCAGCTCTCTCAGCAGGTTCCAAGTGCTTGGTCTGGTTaGCCCTTAATAATCAGCCAC +
Preference number: 5 (lower is better)
Translates to: GPVHNLDTCIWQLSQQVPSAWSG*PLIISH
Trigger: GTGGCTGATTATTAAGGGCAAACCAGACCAAGCACT...TGGAACCTGCTGAGAGAGCTGCCAGATACAGGTGTCCAGGTTGTGCACTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CAA 90 bp CATGCCAGGCCCTTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAAGTGCTTGGTCTGGTTaGCCCTTAATAATCAGCCAC +
Preference number: 5 (lower is better)
Translates to: HARPLKSPNSPPRSDWRRSAWSG*PLIISH
Trigger: GTGGCTGATTATTAAGGGCAAACCAGACCAAGCACT...TCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAAGGGCCTGGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CAA 90 bp GGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGAGTGCTTGGTCTGGTTaGCCCTTAATAATCAGCCAC +
Preference number: 5 (lower is better)
Translates to: GNRLVIGWAWPSAQAPVGSAWSG*PLIISH
Trigger: GTGGCTGATTATTAAGGGCAAACCAGACCAAGCACT...CCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CAA 90 bp TTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCCTTTAGGTTCTTGGCCTCCTaGTGGCCATTTATCCTGGCC +
Preference number: 5 (lower is better)
Translates to: LKSPNSPPRSDWRRGNSFRFLAS*WPFILA
Trigger: GGCCAGGATAAATGGCCACAAGGAGGCCAAGAACCT...AAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CAA 90 bp TCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCTGATACCTGCGGCACCAGCATGTaGGCTAGAATGGCGAGGCCG +
Preference number: 5 (lower is better)
Translates to: SQQVPFIWPVLRSVHPDTCGTSM*ARMARP
Trigger: CGGCCTCGCCATTCTAGCCAACATGCTGGTGCCGCA...GGTATCAGGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp GCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCCAGGGTCTGCAAATCTaGCGGCACCAGCATGTTGGC +
Preference number: 5 (lower is better)
Translates to: AALSAGSIYLAGAKISSPQGLQI*RHQHVG
Trigger: GCCAACATGCTGGTGCCGCAAGATTTGCAGACCCTG...GGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
CDS-3UTR CAA 90 bp GCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCTGCCCTGGGCTGCTGTaGATTTCTGGCTCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: AALSAGSIYLAGAKISSPCPGLL*ISGSPG
Trigger: ACCTGGAGAGCCAGAAATCAACAGCAGCCCAGGGCA...GGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp ACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCCTTTCCAGGAGTCTTTGGGAACCGTCTCGTTATaGGTTGGGCATGGCCATCTG +
Preference number: 5 (lower is better)
Translates to: TRLHALIGEEATPFQESLGTVSL*VGHGHL
Trigger: CAGATGGCCATGCCCAACCAATAACGAGACGGTTCC...CAAAGACTCCTGGAAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp GCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCGAACCCAGTCTCTGGTaGGCGTGGCTGAGTGAAGGT +
Preference number: 5 (lower is better)
Translates to: AALSAGSIYLAGAKISSPEPSLW*AWLSEG
Trigger: ACCTTCACTCAGCCACGCCAACCAGAGACTGGGTTC...GGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp GGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCTCCTGTAGGGGCAGGTTCCATTTATTaGGCCGGTGCTAAGATCAGT +
Preference number: 5 (lower is better)
Translates to: GNRLVIGWAWPSAQAPVGAGSIY*AGAKIS
Trigger: ACTGATCTTAGCACCGGCCAAATAAATGGAACCTGC...CCCTACAGGAGCCTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS TCA 90 bp CAACCAGGCGCACTGGCGTTGGAAAGAGTTCAGCCTTGTAGATGGTaGGGCAGGTTAGGCTTATCCCAAAACATCCCTTTCCCAGCACAG +
Preference number: 5 (lower is better)
Translates to: QPGALALERVQPCRW*GRLGLSQNIPFPAQ
Trigger: CTGTGCTGGGAAAGGGATGTTTTGGGATAAGCCTAACCTGCCTCACCATCTACAAGGCTGAACTCTTTCCAACGCCAGTGCGCCTGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416590.1
CDS-3UTR CAA 90 bp GCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCCCTTGGGGGTCATGTTaGTGGAAACCGCAGAGCCAT +
Preference number: 5 (lower is better)
Translates to: AALSAGSIYLAGAKISSPPWGSC*WKPQSH
Trigger: ATGGCTCTGCGGTTTCCACAAACATGACCCCCAAGG...GGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CAA 90 bp TTGAAGTCGCCCAACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCCTTTATGGTCAGAAGGGCCTaGGGGGTCATGTTTGTGGAA +
Preference number: 5 (lower is better)
Translates to: LKSPNSPPRSDWRRGNSFMVRRA*GVMFVE
Trigger: TTCCACAAACATGACCCCCAAGGCCCTTCTGACCAT...AAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGTTGGGCGACTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS-3UTR CAA 90 bp AGGGAAAGGGAGGGGAACCGTCTCGTTATTGGTTGGGCATGGCCATCTGCACAGGCAGGTTCCATTTATTaGGCCGGTGCTAAGATCAGT +
Preference number: 5 (lower is better)
Translates to: REREGNRLVIGWAWPSAQAGSIY*AGAKIS
Trigger: ACTGATCTTAGCACCGGCCAAATAAATGGAACCTGC...CTGTGCAGATGGCCATGCCCAACCAATAACGAGACGGTTCCCCTCCCTTTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS TCA 90 bp CTGTCATCCGCACTGGCGTTGGAAAGAGTTCAGCCTTGTAGATGGTaGGGCAGGTTAGGCTTATCCCAAAACATCCCTTTCCCAGCACAG +
Preference number: 5 (lower is better)
Translates to: LSSALALERVQPCRW*GRLGLSQNIPFPAQ
Trigger: CTGTGCTGGGAAAGGGATGTTTTGGGATAAGCCTAACCTGCCTCACCATCTACAAGGCTGAACTCTTTCCAACGCCAGTGCGGATGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS GCA 90 bp AGTGACAGTGCCGGTAAGCCAAGTGTTAGCTCAGCCCGGTTCCAATaGAGGCTCTATTATTTTGGGCTTGTTCCTTACCCCTCTGGGATC +
Preference number: 5 (lower is better)
Translates to: SDSAGKPSVSSARFQ*RLYYFGLVPYPSGI
Trigger: GATCCCAGAGGGGTAAGGAACAAGCCCAAAATAATAGAGCCTGCATTGGAACCGGGCTGAGCTAACACTTGGCTTACCGGCACTGTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000460745.1
ENST00000478051.5
CDS-3UTR CAA 90 bp ATTGTGAGCCACTGGAGGGCTTTCAGCAGGGAGGGATTTGGTTTGGATTGCGTTCCTTTCCAGGAGTCTTaGACTAAAGGGGCTCCATGC +
Preference number: 5 (lower is better)
Translates to: IVSHWRAFSREGFGLDCVPFQES*TKGAPC
Trigger: GCATGGAGCCCCTTTAGTCAAAGACTCCTGGAAAGG...AACGCAATCCAAACCAAATCCCTCCCTGCTGAAAGCCCTCCAGTGGCTCACAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CAA 90 bp CCAGGGAAGGGCATGAGGGTAACTTTGTGGCAGGGCCACAGATATCAGTGGCATGCAGGTTCCATTTATTaGGCCGGTGCTAAGATCAGT +
Preference number: 5 (lower is better)
Translates to: PGKGMRVTLWQGHRYQWHAGSIY*AGAKIS
Trigger: ACTGATCTTAGCACCGGCCAAATAAATGGAACCTGC...ATGCCACTGATATCTGTGGCCCTGCCACAAAGTTACCCTCATGCCCTTCCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000301891.9
CDS-3UTR CAA 90 bp TCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCTGATACCCCAGGCGCACTGGCGTaGGAAAGAGTTCAGCCTTGT +
Preference number: 5 (lower is better)
Translates to: SQQVPFIWPVLRSVHPDTPGALA*ERVQPC
Trigger: ACAAGGCTGAACTCTTTCCAACGCCAGTGCGCCTGG...GGTATCAGGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416590.1
CDS-3UTR CAA 90 bp ACTCGCCTCCACGCTCTGATTGGAGAAGAGGCAACTCCTTTCCAGGAGTCTTTGGCAGGTTCCATTTATTaGGCCGGTGCTAAGATCAGT +
Preference number: 5 (lower is better)
Translates to: TRLHALIGEEATPFQESLAGSIY*AGAKIS
Trigger: ACTGATCTTAGCACCGGCCAAATAAATGGAACCTGC...CAAAGACTCCTGGAAAGGAGTTGCCTCTTCTCCAATCAGAGCGTGGAGGCGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp TCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCTGATACCGCTGTTTGGAACCGATaGCAGCCACAAGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: SQQVPFIWPVLRSVHPDTAVWNR*QPQDPG
Trigger: CCCTGGATCTTGTGGCTGCAATCGGTTCCAAACAGC...GGTATCAGGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377585.7
CDS TCA 90 bp TTGATTTCCGCACTGGCGTTGGAAAGAGTTCAGCCTTGTAGATGGTaGGGCAGGTTAGGCTTATCCCAAAACATCCCTTTCCCAGCACAG +
Preference number: 5 (lower is better)
Translates to: LISALALERVQPCRW*GRLGLSQNIPFPAQ
Trigger: CTGTGCTGGGAAAGGGATGTTTTGGGATAAGCCTAACCTGCCTCACCATCTACAAGGCTGAACTCTTTCCAACGCCAGTGCGGAAATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377581.7
CDS TCA 90 bp AAGACAGGAAAACCCACAAGGTCACCAGCTTCAAAGCCTCTGATTTaGATAACAAAGGTTGCAGAGCCGGCCCCTGGGAGAACTGAGGAA +
Preference number: 5 (lower is better)
Translates to: KTGKPTRSPASKPLI*ITKVAEPAPGRTEE
Trigger: TTCCTCAGTTCTCCCAGGGGCCGGCTCTGCAACCTTTGTTATTCAAATCAGAGGCTTTGAAGCTGGTGACCTTGTGGGTTTTCCTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460745.1
CDS-3UTR CAA 90 bp TCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCACCCTGATACCCCTTTCCAGGAGTCTTaGACTAAAGGGGCTCCATGC +
Preference number: 5 (lower is better)
Translates to: SQQVPFIWPVLRSVHPDTPFQES*TKGAPC
Trigger: GCATGGAGCCCCTTTAGTCAAAGACTCCTGGAAAGG...GGTATCAGGGTGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000416590.1
ENST00000428570.1
CDS-3UTR CAA 90 bp CTGGCAGCTCTCTCAGCAGGTTCCATTTATTTGGCCGGTGCTAAGATCAGTTCAATTTCCGCACTGGCGTaGGAAAGAGTTCAGCCTTGT +
Preference number: 5 (lower is better)
Translates to: LAALSAGSIYLAGAKISSISALA*ERVQPC
Trigger: ACAAGGCTGAACTCTTTCCAACGCCAGTGCGGAAAT...TGAACTGATCTTAGCACCGGCCAAATAAATGGAACCTGCTGAGAGAGCTGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377581.7
CDS CCA 72 bp GCCCGGCCCAGGAAGTCCACGGCCCCGAAGAGGGCCTaGAGGAGGAAGATGTCACGGCCCAGGCTCTGCAGG +
Preference number: 6 (lower is better)
Translates to: ARPRKSTAPKRA*RRKMSRPRLCR
Trigger: CCTGCAGAGCCTGGGCCGTGACATCTTCCTCCTCCAGGCCCTCTTCGGGGCCGTGGACTTCCTGGGCCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS CAA 90 bp CGTGGCTGGTCCCCTGGCTCTAGGGACCCTGGCTCTGCCTCTGTCTaGGGACCTCCCTGGGACCCTGGGACCCCCAGCCTAGAGCTGCCT +
Preference number: 6 (lower is better)
Translates to: RGWSPGSRDPGSASV*GPPWDPGTPSLELP
Trigger: AGGCAGCTCTAGGCTGGGGGTCCCAGGGTCCCAGGGAGGTCCCAAGACAGAGGCAGAGCCAGGGTCCCTAGAGCCAGGGGACCAGCCACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460745.1
ENST00000478051.5
CDS TCA 72 bp GGGAACCCGCCTGGATGGTGCGGCGGCCAAGGAAACTaGGCAAGAGGGCAGTGGTGGCCCGGCCCAGGAAGT +
Preference number: 6 (lower is better)
Translates to: GNPPGWCGGQGN*ARGQWWPGPGS
Trigger: ACTTCCTGGGCCGGGCCACCACTGCCCTCTTGCTCAGTTTCCTTGGCCGCCGCACCATCCAGGCGGGTTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS CCA 72 bp GCACCAGCATGTTGGCTAGAATGGCGAGGCCGGCCATaGCCTGGGAACCCGCCTGGATGGTGCGGCGGCCAA +
Preference number: 6 (lower is better)
Translates to: APACWLEWRGRP*PGNPPGWCGGQ
Trigger: TTGGCCGCCGCACCATCCAGGCGGGTTCCCAGGCCATGGCCGGCCTCGCCATTCTAGCCAACATGCTGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS CCA 72 bp GGAGGGACACCAGGACGGCGTACTTCACCACCAGCATaGCGCAGCTCCTCCAGCGGAGCACGGGCACGCAGA +
Preference number: 6 (lower is better)
Translates to: GGTPGRRTSPPA*RSSSSGARARR
Trigger: TCTGCGTGCCCGTGCTCCGCTGGAGGAGCTGCGCCATGCTGGTGGTGAAGTACGCCGTCCTGGTGTCCCTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000460745.1
ENST00000478051.5
ENST00000490834.5
CDS CCA 72 bp AGGCAGGGGAGGATGAAGGTGAGCACCTGCAGGGTCTaGAAGAGGCCCACGCCTCCGGCTTGCTCCAAGAGC +
Preference number: 6 (lower is better)
Translates to: RQGRMKVSTCRV*KRPTPPACSKS
Trigger: GCTCTTGGAGCAAGCCGGAGGCGTGGGCCTCTTCCAGACCCTGCAGGTGCTCACCTTCATCCTCCCCTGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000478051.5
ENST00000490834.5
CDS CCA 72 bp GGCCACGAACCGCAGGCCGCAGTAGATGACGAATGTTaGGGCGAAGATGGTGCTGGTGCCCGCCACGGCCAA +
Preference number: 6 (lower is better)
Translates to: GHEPQAAVDDEC*GEDGAGARHGQ
Trigger: TTGGCCGTGGCGGGCACCAGCACCATCTTCGCCCCAACATTCGTCATCTACTGCGGCCTGCGGTTCGTGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000478051.5
ENST00000490834.5
CDS CCA 72 bp AGCATGTTGGCTAGAATGGCGAGGCCGGCCATGGCCTaGGAACCCGCCTGGATGGTGCGGCGGCCAAGGAAA +
Preference number: 6 (lower is better)
Translates to: SMLARMARPAMA*EPAWMVRRPRK
Trigger: TTTCCTTGGCCGCCGCACCATCCAGGCGGGTTCCCAGGCCATGGCCGGCCTCGCCATTCTAGCCAACATGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
ENST00000428570.1
CDS TCA 72 bp CGCCTCCGGCTTGCTCCAAGAGCTTCGAGAACGCCATaGACAGAGCTGCCTCGGCTGAGCGGACTGCTGACC +
Preference number: 6 (lower is better)
Translates to: RLRLAPRASRTP*TELPRLSGLLT
Trigger: GGTCAGCAGTCCGCTCAGCCGAGGCAGCTCTGTTCATGGCGTTCTCGAAGCTCTTGGAGCAAGCCGGAGGCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
CDS GCA 72 bp CACAAGATCCAGGGCCACCAAGACCTTCTGCCTTCCTaGCCCTCAGCCGGATTGGGGGTGGGGCACTGTCCA +
Preference number: 6 (lower is better)
Translates to: HKIQGHQDLLPS*PSAGLGVGHCP
Trigger: TGGACAGTGCCCCACCCCCAATCCGGCTGAGGGGCAGGAAGGCAGAAGGTCTTGGTGGCCCTGGATCTTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377585.7
CDS CAA 72 bp GCACGCAGAACAGGTCCAGCACCGACCGCGGCTCCTTaGCAGAGGCCACCTCCTCCTTCACGCTGGACATCA +
Preference number: 6 (lower is better)
Translates to: ARRTGPAPTAAP*QRPPPPSRWTS
Trigger: TGATGTCCAGCGTGAAGGAGGAGGTGGCCTCTGCAAAGGAGCCGCGGTCGGTGCTGGACCTGTTCTGCGTGC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000460745.1
ENST00000478051.5
ENST00000490834.5
CDS TCA 72 bp TCCCAAAAGCGGCCACGAACCGCAGGCCGCAGTAGATaGCGAATGTTGGGGCGAAGATGGTGCTGGTGCCCG +
Preference number: 6 (lower is better)
Translates to: SQKRPRTAGRSR*RMLGRRWCWCP
Trigger: CGGGCACCAGCACCATCTTCGCCCCAACATTCGTCATCTACTGCGGCCTGCGGTTCGTGGCCGCTTTTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000478051.5
ENST00000490834.5
CDS TCA 72 bp TGTCTGCGTCCTGTCCCAGACAGAAATGCACCCCCTTaGGGCCTGCGGGTGCTGTTTCCCCTGGACGCTCTG +
Preference number: 6 (lower is better)
Translates to: CLRPVPDRNAPP*GLRVLFPLDAL
Trigger: CAGAGCGTCCAGGGGAAACAGCACCCGCAGGCCTCAAGGGGGTGCATTTCTGTCTGGGACAGGACGCAGACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460745.1
ENST00000478051.5
CDS GCA 72 bp GGCTTCCTGCAGATGGCAGCCTCCAGATCCCACCTGTaGATAGTCCCTCTCTGCTGCCTGCCAGGACTCCTG +
Preference number: 6 (lower is better)
Translates to: GFLQMAASRSHL*IVPLCCLPGLL
Trigger: CAGGAGTCCTGGCAGGCAGCAGAGAGGGACTATGCACAGGTGGGATCTGGAGGCTGCCATCTGCAGGAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460745.1
ENST00000478051.5
CDS CCA 72 bp CACGCAGGGTCTGCAAATCTTGCGGCACCAGCATGTTaGCTAGAATGGCGAGGCCGGCCATGGCCTGGGAAC +
Preference number: 6 (lower is better)
Translates to: HAGSANLAAPAC*LEWRGRPWPGN
Trigger: GTTCCCAGGCCATGGCCGGCCTCGCCATTCTAGCCAACATGCTGGTGCCGCAAGATTTGCAGACCCTGCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
CDS CCA 72 bp GCAGAATGCCATCTGCTGTCATCTTCACCACCAGCATaGCGCAGCTCCTCCAGCGGAGCACGGGCACGCAGA +
Preference number: 6 (lower is better)
Translates to: AECHLLSSSPPA*RSSSSGARARR
Trigger: TCTGCGTGCCCGTGCTCCGCTGGAGGAGCTGCGCCATGCTGGTGGTGAAGATGACAGCAGATGGCATTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377585.7
CDS CAA 72 bp CTGTCTGCGTCCTGTCCCAGACAGAAATGCACCCCCTaGAGGCCTGCGGGTGCTGTTTCCCCTGGACGCTCT +
Preference number: 6 (lower is better)
Translates to: LSASCPRQKCTP*RPAGAVSPGRS
Trigger: AGAGCGTCCAGGGGAAACAGCACCCGCAGGCCTCAAGGGGGTGCATTTCTGTCTGGGACAGGACGCAGACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000460745.1
ENST00000478051.5
CDS CAA 90 bp AGTCCCGGGAAGCCCTGTGATGCCTCGGGGAAACTCCTCCTTATCTaGTGTCCAGGAGTGACTGTGCGGATGCCCCAGAGCTCTGCGGAG +
Preference number: 6 (lower is better)
Translates to: SPGKPCDASGKLLLI*CPGVTVRMPQSSAE
Trigger: CTCCGCAGAGCTCTGGGGCATCCGCACAGTCACTCCTGGACACAAGATAAGGAGGAGTTTCCCCGAGGCATCACAGGGCTTCCCGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377585.7
CDS TCA 72 bp GCCGGATTGGGGGTGGGGCACTGTCCAATAACCAGTTaGGTCAGTCCCTCAGTCCCGGGAAGCCCTGTGATG +
Preference number: 6 (lower is better)
Translates to: AGLGVGHCPITS*VSPSVPGSPVM
Trigger: CATCACAGGGCTTCCCGGGACTGAGGGACTGACTCAACTGGTTATTGGACAGTGCCCCACCCCCAATCCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377585.7
CDS CCA 72 bp AAGGAGCCCACCAGGATCCCGGACATGAAGATGGACTaGCTTAGGGGCTTCAAGCCCTGGGAGCTGCACACC +
Preference number: 6 (lower is better)
Translates to: KEPTRIPDMKMD*LRGFKPWELHT
Trigger: GGTGTGCAGCTCCCAGGGCTTGAAGCCCCTAAGCCAGTCCATCTTCATGTCCGGGATCCTGGTGGGCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000478051.5
CDS CCA 72 bp ATGCCATCTGCTGTCATCCTTGCGGCACCAGCATGTTaGCTAGAATGGCGAGGCCGGCCATGGCCTGGGAAC +
Preference number: 6 (lower is better)
Translates to: MPSAVILAAPAC*LEWRGRPWPGN
Trigger: GTTCCCAGGCCATGGCCGGCCTCGCCATTCTAGCCAACATGCTGGTGCCGCAAGGATGACAGCAGATGGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428570.1
CDS CAA 72 bp ACACGCAGGGTCTGCAAATCTTGCGGCACCAGCATGTaGGCTAGAATGGCGAGGCCGGCCATGGCCTGGGAA +
Preference number: 6 (lower is better)
Translates to: TRRVCKSCGTSM*ARMARPAMAWE
Trigger: TTCCCAGGCCATGGCCGGCCTCGCCATTCTAGCCAACATGCTGGTGCCGCAAGATTTGCAGACCCTGCGTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1
CDS CCA 72 bp GGGCGGATTCTGGCAGCCACCAGGATATCAGGGAGATaGCAAAGAAGGGCACTGATGCTGCCAGCTGGAGAG +
Preference number: 6 (lower is better)
Translates to: GRILAATRISGR*QRRALMLPAGE
Trigger: CTCTCCAGCTGGCAGCATCAGTGCCCTTCTTTGCCATCTCCCTGATATCCTGGTGGCTGCCAGAATCCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000460745.1
CDS CCA 72 bp GCCTCGGCTGAGCGGACTGCTGACCTAACTGCTGTTTaGAACCGATTGCAGCCACAAGATCCAGGGCCACCA +
Preference number: 6 (lower is better)
Translates to: ASAERTADLTAV*NRLQPQDPGPP
Trigger: TGGTGGCCCTGGATCTTGTGGCTGCAATCGGTTCCAAACAGCAGTTAGGTCAGCAGTCCGCTCAGCCGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377585.7
CDS CAA 72 bp AGCGAGGTACTTTCCACAGTGACGGCCTCTTGCCGGTaGCCCTGGGCTGCTGTTGATTTCCGCACTGGCGTT +
Preference number: 6 (lower is better)
Translates to: SEVLSTVTASCR*PWAAVDFRTGV
Trigger: AACGCCAGTGCGGAAATCAACAGCAGCCCAGGGCAACCGGCAAGAGGCCGTCACTGTGGAAAGTACCTCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377581.7
CDS CAA 72 bp AGCCGGATTGGGGGTGGGGCACTGTCCAATAACCAGTaGAGTCAGTCCCTCAGTCCCGGGAAGCCCTGTGAT +
Preference number: 6 (lower is better)
Translates to: SRIGGGALSNNQ*SQSLSPGKPCD
Trigger: ATCACAGGGCTTCCCGGGACTGAGGGACTGACTCAACTGGTTATTGGACAGTGCCCCACCCCCAATCCGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377585.7
CDS CAA 72 bp AATGCCATCTGCTGTCATCCTTGCGGCACCAGCATGTaGGCTAGAATGGCGAGGCCGGCCATGGCCTGGGAA +
Preference number: 6 (lower is better)
Translates to: NAICCHPCGTSM*ARMARPAMAWE
Trigger: TTCCCAGGCCATGGCCGGCCTCGCCATTCTAGCCAACATGCTGGTGCCGCAAGGATGACAGCAGATGGCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428570.1
CDS CAA 90 bp GCCTCGGCTGAGCGGACTGCTGACCTAACTGCTGTTTGGAACCGATaGCAGCCACAAGATCCAGGGCCACCAAGACCTTCTGCCTTCCTG +
Preference number: 6 (lower is better)
Translates to: ASAERTADLTAVWNR*QPQDPGPPRPSAFL
Trigger: CAGGAAGGCAGAAGGTCTTGGTGGCCCTGGATCTTGTGGCTGCAATCGGTTCCAAACAGCAGTTAGGTCAGCAGTCCGCTCAGCCGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377585.7
CDS GCA 72 bp TCCACTCCACCATCAGTGTCAGTGAACTCAGAAAGATaGCGGCCATCCCAAAAGCGGCCACGAACCGCAGGC +
Preference number: 6 (lower is better)
Translates to: STPPSVSVNSER*RPSQKRPRTAG
Trigger: GCCTGCGGTTCGTGGCCGCTTTTGGGATGGCCGGCATCTTTCTGAGTTCACTGACACTGATGGTGGAGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000460745.1
ENST00000478051.5
ENST00000490834.5
CDS CCA 72 bp CCTGGGATGGCGGCTGAGAAGTTCTCCAGGAGCATCTaGGAAGGTATCATGAGGCAGGGGAGGATGAAGGTG +
Preference number: 6 (lower is better)
Translates to: PGMAAEKFSRSI*EGIMRQGRMKV
Trigger: CACCTTCATCCTCCCCTGCCTCATGATACCTTCCCAGATGCTCCTGGAGAACTTCTCAGCCGCCATCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000478051.5
ENST00000490834.5
CDS CCA 72 bp GTACTTTCCACAGTGACGGCCTCTTGCCGGTTGCCCTaGGCTGCTGTTGATTTCCGCACTGGCGTTGGAAAG +
Preference number: 6 (lower is better)
Translates to: VLSTVTASCRLP*AAVDFRTGVGK
Trigger: CTTTCCAACGCCAGTGCGGAAATCAACAGCAGCCCAGGGCAACCGGCAAGAGGCCGTCACTGTGGAAAGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377581.7
CDS CAA 72 bp AAGCCCTGTGATGCCTCGGGGAAACTCCTCCTTATCTaGTGTCCAGGAGTGACTGTGCGGATGCCCCAGAGC +
Preference number: 6 (lower is better)
Translates to: KPCDASGKLLLI*CPGVTVRMPQS
Trigger: GCTCTGGGGCATCCGCACAGTCACTCCTGGACACAAGATAAGGAGGAGTTTCCCCGAGGCATCACAGGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377585.7
CDS CCA 72 bp AGTAGGAGATCAATAGAGAGAAATTCACCACCAGCATaGCGCAGCTCCTCCAGCGGAGCACGGGCACGCAGA +
Preference number: 6 (lower is better)
Translates to: SRRSIERNSPPA*RSSSSGARARR
Trigger: TCTGCGTGCCCGTGCTCCGCTGGAGGAGCTGCGCCATGCTGGTGGTGAATTTCTCTCTATTGATCTCCTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301891.9
ENST00000377581.7
CDS CCA 72 bp TGGAGATGGTCAGAAGGGCCTTGGGGGTCATGTTTGTaGAAACCGCAGAGCCATTGTCCAGCATGTGTGTCC +
Preference number: 6 (lower is better)
Translates to: WRWSEGPWGSCL*KPQSHCPACVS
Trigger: GGACACACATGCTGGACAATGGCTCTGCGGTTTCCACAAACATGACCCCCAAGGCCCTTCTGACCATCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000478051.5
ENST00000490834.5
CDS CCA 72 bp CCTGGCCACCTTTCTGAGCTCCTGAAGTGCTTGGTCTaGTTTGCCCTTAATAATCAGCCACCGGGCGGATTC +
Preference number: 6 (lower is better)
Translates to: PGHLSELLKCLV*FALNNQPPGGF
Trigger: GAATCCGCCCGGTGGCTGATTATTAAGGGCAAACCAGACCAAGCACTTCAGGAGCTCAGAAAGGTGGCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000460745.1
CDS CCA 72 bp TTCACGCTGGACATCAGCACCAGGATATCAGGGAGATaGCAAAGAAGGGCACTGATGCTGCCAGCTGGAGAG +
Preference number: 6 (lower is better)
Translates to: FTLDISTRISGR*QRRALMLPAGE
Trigger: CTCTCCAGCTGGCAGCATCAGTGCCCTTCTTTGCCATCTCCCTGATATCCTGGTGCTGATGTCCAGCGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000478051.5
ENST00000490834.5
CDS CAA 72 bp GGATGGAGATGGTCAGAAGGGCCTTGGGGGTCATGTTaGTGGAAACCGCAGAGCCATTGTCCAGCATGTGTG +
Preference number: 6 (lower is better)
Translates to: GWRWSEGPWGSC*WKPQSHCPACV
Trigger: CACACATGCTGGACAATGGCTCTGCGGTTTCCACAAACATGACCCCCAAGGCCCTTCTGACCATCTCCATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000478051.5
ENST00000490834.5
CDS CAA 72 bp GAGCGGACTGCTGACCTAACTGCTGTTTGGAACCGATaGCAGCCACAAGATCCAGGGCCACCAAGACCTTCT +
Preference number: 6 (lower is better)
Translates to: ERTADLTAVWNR*QPQDPGPPRPS
Trigger: AGAAGGTCTTGGTGGCCCTGGATCTTGTGGCTGCAATCGGTTCCAAACAGCAGTTAGGTCAGCAGTCCGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377585.7
CDS CCA 72 bp GAGAGTCACTGGGCTGGTGCTCAAAGCGGCCGACACTaGAGCCTTGGACAGATAACAACTGGGTTAACAAGA +
Preference number: 6 (lower is better)
Translates to: ESHWAGAQSGRH*SLGQITTGLTR
Trigger: TCTTGTTAACCCAGTTGTTATCTGTCCAAGGCTCCAGTGTCGGCCGCTTTGAGCACCAGCCCAGTGACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460745.1
CDS CAA 72 bp GACATCAGCACCTCTATGGTCAGGTTCTTGGCCTCCTaGTGGCCATTTATCCTGGCCACCTTTCTGAGCTCC +
Preference number: 6 (lower is better)
Translates to: DISTSMVRFLAS*WPFILATFLSS
Trigger: GGAGCTCAGAAAGGTGGCCAGGATAAATGGCCACAAGGAGGCCAAGAACCTGACCATAGAGGTGCTGATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000460745.1
CDS GCA 72 bp GCCGGTAAGCCAAGTGTTAGCTCAGCCCGGTTCCAATaGAGGCTCTATTATTTTGGGCTTGTTCCTTACCCC +
Preference number: 6 (lower is better)
Translates to: AGKPSVSSARFQ*RLYYFGLVPYP
Trigger: GGGGTAAGGAACAAGCCCAAAATAATAGAGCCTGCATTGGAACCGGGCTGAGCTAACACTTGGCTTACCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460745.1
ENST00000478051.5
CDS CCA 72 bp CTGGGCTGGTGCTCAAAGCGGCCGACACTGGAGCCTTaGACAGATAACAACTGGGTTAACAAGACAGGAAAA +
Preference number: 6 (lower is better)
Translates to: LGWCSKRPTLEP*TDNNWVNKTGK
Trigger: TTTTCCTGTCTTGTTAACCCAGTTGTTATCTGTCCAAGGCTCCAGTGTCGGCCGCTTTGAGCACCAGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460745.1
CDS TCA 72 bp AAACCCACAAGGTCACCAGCTTCAAAGCCTCTGATTTaGATAACAAAGGTTGCAGAGCCGGCCCCTGGGAGA +
Preference number: 6 (lower is better)
Translates to: KPTRSPASKPLI*ITKVAEPAPGR
Trigger: TCTCCCAGGGGCCGGCTCTGCAACCTTTGTTATTCAAATCAGAGGCTTTGAAGCTGGTGACCTTGTGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460745.1
CDS GCA 72 bp GCCATTTATCCTGGCCACCTTTCTGAGCTCCTGAAGTaGTTGGTCTGGTTTGCCCTTAATAATCAGCCACCG +
Preference number: 6 (lower is better)
Translates to: AIYPGHLSELLK*LVWFALNNQPP
Trigger: CGGTGGCTGATTATTAAGGGCAAACCAGACCAAGCACTTCAGGAGCTCAGAAAGGTGGCCAGGATAAATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000377585.7
ENST00000460745.1
CDS TCA 72 bp GCACTGGCGTTGGAAAGAGTTCAGCCTTGTAGATGGTaGGGCAGGTTAGGCTTATCCCAAAACATCCCTTTC +
Preference number: 6 (lower is better)
Translates to: ALALERVQPCRW*GRLGLSQNIPF
Trigger: GAAAGGGATGTTTTGGGATAAGCCTAACCTGCCTCACCATCTACAAGGCTGAACTCTTTCCAACGCCAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000301891.9
ENST00000377581.7
ENST00000416590.1