RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC18A1 (Homo sapiens)

Ensembl gene IDs: ENSG00000036565

Ensembl transcript IDs: ENST00000265808.11, ENST00000276373.10, ENST00000381608.8, ENST00000437980.3, ENST00000440926.3, ENST00000517776.5, ENST00000519026.5, ENST00000519171.1, ENST00000522513.5, ENST00000524272.1

Found 642 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GAGGGGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTaGGCCGTGGGCTCAGCCATGGTGATCTGGTCCCAGGGAAAGAGG +
Preference number: 1 (lower is better)
Translates to: EGRKEDSQAEVCEAH*AVGSAMVIWSQGKR
Trigger: CCTCTTTCCCTGGGACCAGATCACCATGGCTGAGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
3UTR CCA 90 bp GGTCAGGCTCCTCATCACTGTCCTCCCCCAGAGGAAATTCCTTCGTaGGCTTCTGGGTTGCATACATCCGGGTCTCCATGGGGCAGTCCT +
Preference number: 1 (lower is better)
Translates to: GQAPHHCPPPEEIPS*ASGLHTSGSPWGSP
Trigger: AGGACTGCCCCATGGAGACCCGGATGTATGCAACCCAGAAGCCCACGAAGGAATTTCCTCTGGGGGAGGACAGTGATGAGGAGCCTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517776.5
3UTR GCA 90 bp ATCACTGTCCTCCCCCAGAGGAAATTCCTTCGTGGGCTTCTGGGTTaGATACATCCGGGTCTCCATGGGGCAGTCCTGACTCAGAATAGC +
Preference number: 1 (lower is better)
Translates to: ITVLPQRKFLRGLLG*IHPGLHGAVLTQNS
Trigger: GCTATTCTGAGTCAGGACTGCCCCATGGAGACCCGGATGTATGCAACCCAGAAGCCCACGAAGGAATTTCCTCTGGGGGAGGACAGTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517776.5
3UTR GCA 90 bp ACCCGTCACAGCTCAAGTTTAATCAACCTCACAGCAGCGGGAAGGTaGATCACTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCA +
Preference number: 1 (lower is better)
Translates to: TRHSSSLINLTAAGR*ITLSSHKRWATAAP
Trigger: TGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAGTGATGCACCTTCCCGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGACGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR TCA 90 bp CCCACTGGTTTCAGGGGCACATTACTCACTACCACCTCTATGCAATaGGTCACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAAC +
Preference number: 1 (lower is better)
Translates to: PTGFRGTLLTTTSMQ*VTPCRTRHSSSLIN
Trigger: GTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR TCA 90 bp AATCCACCATGCCTATGGCAAGGCCAAGCCCTGCATTGGGGCCAATaGGACCAAAAATATTGTGAGCCAGAGGAACCTAAACATACACTC +
Preference number: 1 (lower is better)
Translates to: NPPCLWQGQALHWGQ*DQKYCEPEEPKHTL
Trigger: GAGTGTATGTTTAGGTTCCTCTGGCTCACAATATTTTTGGTCTCATTGGCCCCAATGCAGGGCTTGGCCTTGCCATAGGCATGGTGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517776.5
3UTR-3UTR TCA 90 bp GATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGCCAGGCAGAGGTATGTaGAGCCCACTGAGCCGTGGG +
Preference number: 2 (lower is better)
Translates to: DGPLRHQGIEEELQVTQVPGRGM*SPLSRG
Trigger: CCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGG...CACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
3UTR-3UTR GCA 90 bp GACCATGAGCCAGGGAAAACCGATGGCCTTTACAATGGCACCACCGGTGGATGGGGCAAGGCCAAGCCCTaGATTGGGGCCAATGAGACC +
Preference number: 2 (lower is better)
Translates to: DHEPGKTDGLYNGTTGGWGKAKP*IGANET
Trigger: GGTCTCATTGGCCCCAATGCAGGGCTTGGCCTTGCC...CCATCCACCGGTGGTGCCATTGTAAAGGCCATCGGTTTTCCCTGGCTCATGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517776.5
3UTR-3UTR TCA 90 bp GGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTTGGGCTCAGCCATGGTaGTCTGGTCCCAGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: GGKKIPRQRYVKPTEPWAWAQPW*SGPRER
Trigger: TCTTTCCCTGGGACCAGATCACCATGGCTGAGCCCA...AGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
3UTR-3UTR TCA 90 bp AGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTCCAGGCAGAGGTATGTaGAGCCCACTGAGCCGTGGG +
Preference number: 2 (lower is better)
Translates to: RWATAAPRHRGRATSYTGPGRGM*SPLSRG
Trigger: CCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGG...ACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
3UTR-3UTR TCA 90 bp GATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGTGGGCTCAGCCATGGTaGTCTGGTCCCAGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: DGPLRHQGIEEELQVTQVWAQPW*SGPRER
Trigger: TCTTTCCCTGGGACCAGATCACCATGGCTGAGCCCA...CACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
3UTR-3UTR TCA 90 bp CTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGGTATGTGAAGCCCACTaGGCCGTGGGCTCAGCCATG +
Preference number: 2 (lower is better)
Translates to: LQVTQVRRVSGTVSMGGEVCEAH*AVGSAM
Trigger: CATGGCTGAGCCCACGGCTCAGTGGGCTTCACATAC...CTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
3UTR-3UTR TCA 90 bp TGGTTTCAGGGGCACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCCAGGCAGAGGTATGTaGAGCCCACTGAGCCGTGGG +
Preference number: 2 (lower is better)
Translates to: WFQGHITHYHLYAMSHPLPGRGM*SPLSRG
Trigger: CCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGG...CAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR CCA 90 bp GGGAGGGGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTCCCAGGGAAAGAGGTaGTCACTGAGGCATCATGAA +
Preference number: 2 (lower is better)
Translates to: GRGGKKIPRQRYVKPTEPSQGKR*SLRHHE
Trigger: TTCATGATGCCTCAGTGACCACCTCTTTCCCTGGGA...CGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
3UTR-3UTR TCA 90 bp GCAATGAGTCACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACGTATGTGAAGCCCACTaGGCCGTGGGCTCAGCCATG +
Preference number: 2 (lower is better)
Translates to: AMSHPLQNPSQLKFNQPHVCEAH*AVGSAM
Trigger: CATGGCTGAGCCCACGGCTCAGTGGGCTTCACATAC...GTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR CCA 90 bp GATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGCAGGGACAGTGTCCATaGGAGGGGAGGAAAGAAGAT +
Preference number: 2 (lower is better)
Translates to: DGPLRHQGIEEELQVTQVQGQCP*EGRKED
Trigger: ATCTTCTTTCCTCCCCTCCCATGGACACTGTCCCTG...CACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
3UTR-3UTR CCA 90 bp GGTCTCCATGGGGCAGTCCTGACTCAGAATAGCAAGCTTCTCTTCCTTTGCCGGTCTTCCCATAAAAGATaGGCCACTGCGGCACCAAGG +
Preference number: 2 (lower is better)
Translates to: GLHGAVLTQNSKLLFLCRSSHKR*ATAAPR
Trigger: CCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGA...CCGGCAAAGGAAGAGAAGCTTGCTATTCTGAGTCAGGACTGCCCCATGGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517776.5
3UTR-3UTR CCA 90 bp GGTCTCCATGGGGCAGTCCTGACTCAGAATAGCAAGCTTCTCTTCCTTTGCCGGAATCCACCATGCCTATaGCAAGGCCAAGCCCTGCAT +
Preference number: 2 (lower is better)
Translates to: GLHGAVLTQNSKLLFLCRNPPCL*QGQALH
Trigger: ATGCAGGGCTTGGCCTTGCCATAGGCATGGTGGATT...CCGGCAAAGGAAGAGAAGCTTGCTATTCTGAGTCAGGACTGCCCCATGGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517776.5
3UTR-3UTR CCA 90 bp GGCCTTTACAATGGCACCACCGGTGGATGGACCTATAGCAAAGCCCATGCAAAACCATACACCGAGGTGTaGCGTAGATCCACCAGGTGC +
Preference number: 2 (lower is better)
Translates to: GLYNGTTGGWTYSKAHAKPYTEV*RRSTRC
Trigger: GCACCTGGTGGATCTACGCCACACCTCGGTGTATGG...TTTTGCATGGGCTTTGCTATAGGTCCATCCACCGGTGGTGCCATTGTAAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517776.5
3UTR-3UTR TCA 90 bp GGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTCAGGTCACTGAGGCATCATaGATTCAAGGAGCACCTTCT +
Preference number: 2 (lower is better)
Translates to: GKKIPRQRYVKPTEPWAQVTEAS*IQGAPS
Trigger: AGAAGGTGCTCCTTGAATTCATGATGCCTCAGTGAC...CTGAGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
3UTR-3UTR TCA 90 bp ATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGAACCCGTCACAGTGGGCTCAGCCATGGTaGTCTGGTCCCAGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: ITHYHLYAMSHPLQNPSQWAQPW*SGPRER
Trigger: TCTTTCCCTGGGACCAGATCACCATGGCTGAGCCCA...CTGTGACGGGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR TCA 90 bp GAACACGTTGAGGAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGTATGTGAAGCCCACTaGGCCGTGGGCTCAGCCATG +
Preference number: 2 (lower is better)
Translates to: EHVEEKRVTLFRSVGTMPVCEAH*AVGSAM
Trigger: CATGGCTGAGCCCACGGCTCAGTGGGCTTCACATAC...TGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTCCTCAACGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR TCA 90 bp ATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACAGTATGTGAAGCCCACTaGGCCGTGGGCTCAGCCATG +
Preference number: 2 (lower is better)
Translates to: IKDGPLRHQGIEEELQVTVCEAH*AVGSAM
Trigger: CATGGCTGAGCCCACGGCTCAGTGGGCTTCACATAC...TGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
3UTR-3UTR TCA 90 bp GAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCCAGGCAGAGGTATGTaGAGCCCACTGAGCCGTGGG +
Preference number: 2 (lower is better)
Translates to: EKRVTLFRSVGTMPEKIRPGRGM*SPLSRG
Trigger: CCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGG...CCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR GCA 90 bp GTCACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACAGCAGCGACAGCAGCGGGAAGGTaGATCACTCTGTCTTCCCAT +
Preference number: 2 (lower is better)
Translates to: VTPCRTRHSSSLINLTAATAAGR*ITLSSH
Trigger: ATGGGAAGACAGAGTGATGCACCTTCCCGCTGCTGT...CGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR GCA 90 bp CTTGTCAGTCACCCCACTGGTTTCAGGGGCACATTACTCACTACCACCTCTATGAGGAGCACCTTCTGCTaGTACTCCTCATGGTCAGGC +
Preference number: 2 (lower is better)
Translates to: LVSHPTGFRGTLLTTTSMRSTFC*YSSWSG
Trigger: GCCTGACCATGAGGAGTAGCAGCAGAAGGTGCTCCT...CATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCAGTGGGGTGACTGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437980.3
ENST00000517776.5
3UTR-3UTR TCA 90 bp GATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGGTCACTGAGGCATCATaGATTCAAGGAGCACCTTCT +
Preference number: 2 (lower is better)
Translates to: DGPLRHQGIEEELQVTQVVTEAS*IQGAPS
Trigger: AGAAGGTGCTCCTTGAATTCATGATGCCTCAGTGAC...CACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
3UTR-3UTR TCA 90 bp GAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGGTATGTGAAGCCCACTaGGCCGTGGGCTCAGCCATG +
Preference number: 2 (lower is better)
Translates to: EKRVTLFRSVGTMPEKIRVCEAH*AVGSAM
Trigger: CATGGCTGAGCCCACGGCTCAGTGGGCTTCACATAC...CCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR TCA 90 bp CTTGTCAGTCACCCCACTGGTTTCAGGGGCACATTACTCACTACCACCTCTATGACCACCTCTATGCAATaGGTCACCCCTTGCAGAACC +
Preference number: 2 (lower is better)
Translates to: LVSHPTGFRGTLLTTTSMTTSMQ*VTPCRT
Trigger: GGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGT...CATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCAGTGGGGTGACTGACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR TCA 90 bp CTGCTGCTACTCCTCATGGTCAGGCTCCTCATCACTGTCCTCCCCCAGAGGAAACTGCATTGGGGCCAATaGGACCAAAAATATTGTGAG +
Preference number: 2 (lower is better)
Translates to: LLLLLMVRLLITVLPQRKLHWGQ*DQKYCE
Trigger: CTCACAATATTTTTGGTCTCATTGGCCCCAATGCAG...TTTCCTCTGGGGGAGGACAGTGATGAGGAGCCTGACCATGAGGAGTAGCAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000517776.5
3UTR-3UTR GCA 90 bp CTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGACAGCAGCGGGAAGGTaGATCACTCTGTCTTCCCAT +
Preference number: 2 (lower is better)
Translates to: LQVTQVRRVSGTVSMGGETAAGR*ITLSSH
Trigger: ATGGGAAGACAGAGTGATGCACCTTCCCGCTGCTGT...CTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
3UTR-3UTR GCA 90 bp TCACAGCTCAAGTTTAATCAACCTCACAGCAGCGGGAAGGTGCATCACTCTGTCCGTGGGCTTCTGGGTTaGATACATCCGGGTCTCCAT +
Preference number: 2 (lower is better)
Translates to: SQLKFNQPHSSGKVHHSVRGLLG*IHPGLH
Trigger: ATGGAGACCCGGATGTATGCAACCCAGAAGCCCACG...GACAGAGTGATGCACCTTCCCGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517776.5
3UTR-3UTR CCA 90 bp TCACAGCTCAAGTTTAATCAACCTCACAGCAGCGGGAAGGTGCATCACTCTGTCACATCCGGGTCTCCATaGGGCAGTCCTGACTCAGAA +
Preference number: 2 (lower is better)
Translates to: SQLKFNQPHSSGKVHHSVTSGSP*GSPDSE
Trigger: TTCTGAGTCAGGACTGCCCCATGGAGACCCGGATGT...GACAGAGTGATGCACCTTCCCGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517776.5
3UTR CAA 90 bp CAGGGGCACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTaGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACAGCAGC +
Preference number: 2 (lower is better)
Translates to: QGHITHYHLYAMSHP*QNPSQLKFNQPHSS
Trigger: GCTGCTGTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTGCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR TCA 90 bp ACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGAACCCGTCACAGCTCGTCACTGAGGCATCATaGATTCAAGGAGCACCTTCT +
Preference number: 2 (lower is better)
Translates to: THYHLYAMSHPLQNPSQLVTEAS*IQGAPS
Trigger: AGAAGGTGCTCCTTGAATTCATGATGCCTCAGTGAC...GAGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR TCA 90 bp GGAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGTGGGCTCAGCCATGGTaGTCTGGTCCCAGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: GKEGNTLPICWDYARENQWAQPW*SGPRER
Trigger: TCTTTCCCTGGGACCAGATCACCATGGCTGAGCCCA...CTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR GCA 90 bp GGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCAGGAGCACCTTCTGCTaGTACTCCTCATGGTCAGGC +
Preference number: 2 (lower is better)
Translates to: GTMPEKIRQQIKEACQSPRSTFC*YSSWSG
Trigger: GCCTGACCATGAGGAGTAGCAGCAGAAGGTGCTCCT...GGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437980.3
ENST00000517776.5
3UTR-3UTR CCA 90 bp CCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTTCCCAGGGAAAGAGGTaGTCACTGAGGCATCATGAA +
Preference number: 2 (lower is better)
Translates to: PIKDGPLRHQGIEEELQVSQGKR*SLRHHE
Trigger: TTCATGATGCCTCAGTGACCACCTCTTTCCCTGGGA...AACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
3UTR-3UTR CCA 90 bp AAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACACAGGGACAGTGTCCATaGGAGGGGAGGAAAGAAGAT +
Preference number: 2 (lower is better)
Translates to: KRWATAAPRHRGRATSYTQGQCP*EGRKED
Trigger: ATCTTCTTTCCTCCCCTCCCATGGACACTGTCCCTG...TGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
3UTR-3UTR TCA 90 bp CTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGGTCACTGAGGCATCATaGATTCAAGGAGCACCTTCT +
Preference number: 2 (lower is better)
Translates to: LQVTQVRRVSGTVSMGGEVTEAS*IQGAPS
Trigger: AGAAGGTGCTCCTTGAATTCATGATGCCTCAGTGAC...CTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
3UTR-3UTR TCA 90 bp ACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGGCAGTTTCTTTGGGCTCAGCCATGGTaGTCTGGTCCCAGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: TPLLLGNLQSGGISRQFLWAQPW*SGPRER
Trigger: TCTTTCCCTGGGACCAGATCACCATGGCTGAGCCCA...AAGAAACTGCCTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR TCA 90 bp CTTTTCACTGAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAACCAGGCAGAGGTATGTaGAGCCCACTGAGCCGTGGG +
Preference number: 2 (lower is better)
Translates to: LFTEGKALLAALDLATEKPGRGM*SPLSRG
Trigger: CCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGG...TTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTCAGTGAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR CCA 90 bp GGAAAACCCGGGAAAGAACACGTTGAGGAAAAGAGGGTAACACTCTTCCGATCTTCTTCCCATAAAAGATaGGCCACTGCGGCACCAAGG +
Preference number: 2 (lower is better)
Translates to: GKPGKEHVEEKRVTLFRSSSHKR*ATAAPR
Trigger: CCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGA...AGATCGGAAGAGTGTTACCCTCTTTTCCTCAACGTGTTCTTTCCCGGGTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR TCA 90 bp CTTTTCACTGAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAAGTATGTGAAGCCCACTaGGCCGTGGGCTCAGCCATG +
Preference number: 2 (lower is better)
Translates to: LFTEGKALLAALDLATEKVCEAH*AVGSAM
Trigger: CATGGCTGAGCCCACGGCTCAGTGGGCTTCACATAC...TTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTCAGTGAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR TCA 90 bp CTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGTACAAGTTACACAGGTaGGAAGAGTATCAGGGACAG +
Preference number: 2 (lower is better)
Translates to: LQVTQVRRVSGTVSMGGEYKLHR*EEYQGQ
Trigger: CTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTA...CTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
3UTR-3UTR GCA 90 bp AAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAAACAGCAGCGGGAAGGTaGATCACTCTGTCTTCCCAT +
Preference number: 2 (lower is better)
Translates to: KRVTLFRSVGTMPEKIRQTAAGR*ITLSSH
Trigger: ATGGGAAGACAGAGTGATGCACCTTCCCGCTGCTGT...TTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR CCA 90 bp GGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCTCCCAGGGAAAGAGGTaGTCACTGAGGCATCATGAA +
Preference number: 2 (lower is better)
Translates to: GTMPEKIRQQIKEACQSPSQGKR*SLRHHE
Trigger: TTCATGATGCCTCAGTGACCACCTCTTTCCCTGGGA...GGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR CCA 90 bp CTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTCAGGGACAGTGTCCATaGGAGGGGAGGAAAGAAGAT +
Preference number: 2 (lower is better)
Translates to: LCQRKSGNRLKRLVSHPTQGQCP*EGRKED
Trigger: ATCTTCTTTCCTCCCCTCCCATGGACACTGTCCCTG...AGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR CCA 90 bp TGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTGGTTGTCAGTCACCCCACTaGTTTCAGGGGCACATTACT +
Preference number: 2 (lower is better)
Translates to: CQRKSGNRLKRLVSHPTGCQSPH*FQGHIT
Trigger: AGTAATGTGCCCCTGAAACCAGTGGGGTGACTGACA...ACCAGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR CCA 90 bp TCACAGCTCAAGTTTAATCAACCTCACAGCAGCGGGAAGGTGCATCACTCTGTCTTTTCTCAACTCGGCTaGGAAAACCCGGGAAAGAAC +
Preference number: 2 (lower is better)
Translates to: SQLKFNQPHSSGKVHHSVFSQLG*ENPGKN
Trigger: GTTCTTTCCCGGGTTTTCCCAGCCGAGTTGAGAAAA...GACAGAGTGATGCACCTTCCCGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR CCA 90 bp GAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGTGCTGCTACTCCTCATaGTCAGGCTCCTCATCACTG +
Preference number: 2 (lower is better)
Translates to: EKRVTLFRSVGTMPEKIRCCYSS*SGSSSL
Trigger: CAGTGATGAGGAGCCTGACCATGAGGAGTAGCAGCA...CCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517776.5
3UTR-3UTR TCA 90 bp TGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTGGTGTCACTGAGGCATCATaGATTCAAGGAGCACCTTCT +
Preference number: 2 (lower is better)
Translates to: CQRKSGNRLKRLVSHPTGVTEAS*IQGAPS
Trigger: AGAAGGTGCTCCTTGAATTCATGATGCCTCAGTGAC...ACCAGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR TCA 90 bp ACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGGCAGTTTCTTACCACCTCTATGCAATaGGTCACCCCTTGCAGAACC +
Preference number: 2 (lower is better)
Translates to: TPLLLGNLQSGGISRQFLTTSMQ*VTPCRT
Trigger: GGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGT...AAGAAACTGCCTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR TCA 90 bp TCACAGCTCAAGTTTAATCAACCTCACAGCAGCGGGAAGGTGCATCACTCTGTCGCAGCAAGACAATGCTaGGAACATTTTCTCAACTCG +
Preference number: 2 (lower is better)
Translates to: SQLKFNQPHSSGKVHHSVAARQC*EHFLNS
Trigger: CGAGTTGAGAAAATGTTCTCAGCATTGTCTTGCTGC...GACAGAGTGATGCACCTTCCCGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR GCA 90 bp TACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGGCAGTTTCTACAGCAGCGGGAAGGTaGATCACTCTGTCTTCCCAT +
Preference number: 2 (lower is better)
Translates to: YTPPVRKSTIRRDFKAVSTAAGR*ITLSSH
Trigger: ATGGGAAGACAGAGTGATGCACCTTCCCGCTGCTGT...AGAAACTGCCTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR GCA 90 bp CTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTTCAAGGAGCACCTTCTaGTGCTACTCCTCATGGTCA +
Preference number: 2 (lower is better)
Translates to: LCQRKSGNRLKRLVSHPTSRSTF*CYSSWS
Trigger: TGACCATGAGGAGTAGCAGCAGAAGGTGCTCCTTGA...AGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437980.3
ENST00000517776.5
3UTR-3UTR CCA 90 bp CTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTTCCCAGGGAAAGAGGTaGTCACTGAGGCATCATGAA +
Preference number: 2 (lower is better)
Translates to: LCQRKSGNRLKRLVSHPTSQGKR*SLRHHE
Trigger: TTCATGATGCCTCAGTGACCACCTCTTTCCCTGGGA...AGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR CCA 90 bp TACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGGCAGTTTCTCAGGGACAGTGTCCATaGGAGGGGAGGAAAGAAGAT +
Preference number: 2 (lower is better)
Translates to: YTPPVRKSTIRRDFKAVSQGQCP*EGRKED
Trigger: ATCTTCTTTCCTCCCCTCCCATGGACACTGTCCCTG...AGAAACTGCCTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR TCA 90 bp GGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCTACAAGTTACACAGGTaGGAAGAGTATCAGGGACAG +
Preference number: 2 (lower is better)
Translates to: GTMPEKIRQQIKEACQSPYKLHR*EEYQGQ
Trigger: CTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTA...GGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR TCA 90 bp GAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATCACTCACTACCACCTCTATGCAATaGGTCACCCCTTGCAGAACC +
Preference number: 2 (lower is better)
Translates to: EGKALLAALDLATEKSLTTTSMQ*VTPCRT
Trigger: GGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGT...AGTGAGTGATTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR CCA 90 bp ACAATGTCACATTACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCTGTCAGTCACCCCACTaGTTTCAGGGGCACATTACT +
Preference number: 2 (lower is better)
Translates to: TMSHYTPPVRKSTIRRDFCQSPH*FQGHIT
Trigger: AGTAATGTGCCCCTGAAACCAGTGGGGTGACTGACA...GAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTAATGTGACATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR CCA 90 bp CAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGGAATGGTCTCATTCTTCATaGAATAAAGTTGCCTCTGTT +
Preference number: 2 (lower is better)
Translates to: QVTQVRRVSGTVSMGGEEWSHSS*NKVASV
Trigger: AACAGAGGCAACTTTATTCCATGAAGAATGAGACCA...TTCCTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517776.5
3UTR-3UTR TCA 90 bp TCTTCTACTTTTATTTCTAAGAGTCTAAGAGGTTCAGAAAAGGTAGGAACACACTGGGCTCAGCCATGGTaGTCTGGTCCCAGGGAAAGA +
Preference number: 2 (lower is better)
Translates to: SSTFISKSLRGSEKVGTHWAQPW*SGPRER
Trigger: TCTTTCCCTGGGACCAGATCACCATGGCTGAGCCCA...GTGTGTTCCTACCTTTTCTGAACCTCTTAGACTCTTAGAAATAAAAGTAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR GCA 90 bp ACAATGTCACATTACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCTCACTACCACCTCTATaGAATGAGTCACCCCTTGCA +
Preference number: 2 (lower is better)
Translates to: TMSHYTPPVRKSTIRRDFSLPPL*NESPLA
Trigger: TGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGA...GAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTAATGTGACATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR GCA 90 bp TTCACTGAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATCATCAAGGAGCACCTTCTaGTGCTACTCCTCATGGTCA +
Preference number: 2 (lower is better)
Translates to: FTEGKALLAALDLATEKSSRSTF*CYSSWS
Trigger: TGACCATGAGGAGTAGCAGCAGAAGGTGCTCCTTGA...TGATTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTCAGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437980.3
ENST00000517776.5
3UTR-3UTR CCA 90 bp TTCACTGAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATCATCCCAGGGAAAGAGGTaGTCACTGAGGCATCATGAA +
Preference number: 2 (lower is better)
Translates to: FTEGKALLAALDLATEKSSQGKR*SLRHHE
Trigger: TTCATGATGCCTCAGTGACCACCTCTTTCCCTGGGA...TGATTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTCAGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR CCA 90 bp CTTTTCACTGAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATGTCAGTCACCCCACTaGTTTCAGGGGCACATTACT +
Preference number: 2 (lower is better)
Translates to: LFTEGKALLAALDLATEKCQSPH*FQGHIT
Trigger: AGTAATGTGCCCCTGAAACCAGTGGGGTGACTGACA...TTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTCAGTGAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR CCA 90 bp GAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGACTCTTCCGATCTGTTaGGACTATGCCAGAGAAAAT +
Preference number: 2 (lower is better)
Translates to: EKRVTLFRSVGTMPEKIRTLPIC*DYAREN
Trigger: ATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGT...CCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR TCA 90 bp ATGTCACATTACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGTACAAGTTACACAGGTaGGAAGAGTATCAGGGACAG +
Preference number: 2 (lower is better)
Translates to: MSHYTPPVRKSTIRRDFKYKLHR*EEYQGQ
Trigger: CTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTA...CTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTAATGTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR TCA 90 bp CTTTTCACTGAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAACGGGAAAGAACACGTTaGGGAAAAGAGGGTAACACT +
Preference number: 2 (lower is better)
Translates to: LFTEGKALLAALDLATEKRERTR*GKEGNT
Trigger: AGTGTTACCCTCTTTTCCTCAACGTGTTCTTTCCCG...TTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTCAGTGAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR CCA 90 bp ATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACTAAACATACACTCCTaGTCTCATTCTTCATGGAAT +
Preference number: 2 (lower is better)
Translates to: IKDGPLRHQGIEEELQVTLNIHS*SHSSWN
Trigger: ATTCCATGAAGAATGAGACCAGGAGTGTATGTTTAG...TGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517776.5
3UTR-3UTR CCA 90 bp GAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATCACTCACTCAAAACTCTTCAAGCTaGCATTTGGCAGCAAGACAA +
Preference number: 2 (lower is better)
Translates to: EGKALLAALDLATEKSLTQNSSS*HLAARQ
Trigger: TTGTCTTGCTGCCAAATGCCAGCTTGAAGAGTTTTG...AGTGAGTGATTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR CCA 72 bp CTGTCCTCCCCCAGAGGAAATTCCTTCGTGGGCTTCTaGGTTGCATACATCCGGGTCTCCATGGGGCAGTCC +
Preference number: 3 (lower is better)
Translates to: LSSPRGNSFVGF*VAYIRVSMGQS
Trigger: GGACTGCCCCATGGAGACCCGGATGTATGCAACCCAGAAGCCCACGAAGGAATTTCCTCTGGGGGAGGACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517776.5
3UTR-3UTR CAA 90 bp CTGCTGCTACTCCTCATGGTCAGGCTCCTCATCACTGTCCTCCCCCAGAGGAAAGCAATGAGTCACCCCTaGCAGAACCCGTCACAGCTC +
Preference number: 3 (lower is better)
Translates to: LLLLLMVRLLITVLPQRKAMSHP*QNPSQL
Trigger: GAGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGC...TTTCCTCTGGGGGAGGACAGTGATGAGGAGCCTGACCATGAGGAGTAGCAGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517776.5
3UTR TCA 72 bp AAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTaGGCCGTGGGCTCAGCCATGGTGATCTGGTCCCAG +
Preference number: 3 (lower is better)
Translates to: KEDSQAEVCEAH*AVGSAMVIWSQ
Trigger: CTGGGACCAGATCACCATGGCTGAGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
3UTR CCA 72 bp CCTCATCACTGTCCTCCCCCAGAGGAAATTCCTTCGTaGGCTTCTGGGTTGCATACATCCGGGTCTCCATGG +
Preference number: 3 (lower is better)
Translates to: PHHCPPPEEIPS*ASGLHTSGSPW
Trigger: CCATGGAGACCCGGATGTATGCAACCCAGAAGCCCACGAAGGAATTTCCTCTGGGGGAGGACAGTGATGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517776.5
3UTR GCA 72 bp CTGGTTTCAGGGGCACATTACTCACTACCACCTCTATaGAATGAGTCACCCCTTGCAGAACCCGTCACAGCT +
Preference number: 3 (lower is better)
Translates to: LVSGAHYSLPPL*NESPLAEPVTA
Trigger: AGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR CAA 90 bp GGAAAACCCGGGAAAGAACACGTTGAGGAAAAGAGGGTAACACTCTTCCGATCTGCAATGAGTCACCCCTaGCAGAACCCGTCACAGCTC +
Preference number: 3 (lower is better)
Translates to: GKPGKEHVEEKRVTLFRSAMSHP*QNPSQL
Trigger: GAGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGC...AGATCGGAAGAGTGTTACCCTCTTTTCCTCAACGTGTTCTTTCCCGGGTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR-3UTR CAA 90 bp ATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTGGGCAATGAGTCACCCCTaGCAGAACCCGTCACAGCTC +
Preference number: 3 (lower is better)
Translates to: MPEKIRQQIKEACQSPHWAMSHP*QNPSQL
Trigger: GAGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGC...CCAGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR TCA 72 bp TTCAGGGGCACATTACTCACTACCACCTCTATGCAATaGGTCACCCCTTGCAGAACCCGTCACAGCTCAAGT +
Preference number: 3 (lower is better)
Translates to: FRGTLLTTTSMQ*VTPCRTRHSSS
Trigger: ACTTGAGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTGCCCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR TCA 72 bp CTCAACTCGGCTGGGAAAACCCGGGAAAGAACACGTTaGGGAAAAGAGGGTAACACTCTTCCGATCTGTTGG +
Preference number: 3 (lower is better)
Translates to: LNSAGKTRERTR*GKEGNTLPICW
Trigger: CCAACAGATCGGAAGAGTGTTACCCTCTTTTCCTCAACGTGTTCTTTCCCGGGTTTTCCCAGCCGAGTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR TCA 72 bp TGCCTATGGCAAGGCCAAGCCCTGCATTGGGGCCAATaGGACCAAAAATATTGTGAGCCAGAGGAACCTAAA +
Preference number: 3 (lower is better)
Translates to: CLWQGQALHWGQ*DQKYCEPEEPK
Trigger: TTTAGGTTCCTCTGGCTCACAATATTTTTGGTCTCATTGGCCCCAATGCAGGGCTTGGCCTTGCCATAGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517776.5
3UTR-3UTR CAA 90 bp CTGCTGCTACTCCTCATGGTCAGGCTCCTCATCACTGTCCTCCCCCAGAGGAAACTTCATGGAATAAAGTaGCCTCTGTTTTCCATTATG +
Preference number: 3 (lower is better)
Translates to: LLLLLMVRLLITVLPQRKLHGIK*PLFSIM
Trigger: CATAATGGAAAACAGAGGCAACTTTATTCCATGAAG...TTTCCTCTGGGGGAGGACAGTGATGAGGAGCCTGACCATGAGGAGTAGCAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517776.5
3UTR GCA 72 bp AGCTCAAGTTTAATCAACCTCACAGCAGCGGGAAGGTaGATCACTCTGTCTTCCCATAAAAGATGGGCCACT +
Preference number: 3 (lower is better)
Translates to: SSSLINLTAAGR*ITLSSHKRWAT
Trigger: AGTGGCCCATCTTTTATGGGAAGACAGAGTGATGCACCTTCCCGCTGCTGTGAGGTTGATTAAACTTGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR CCA 72 bp AGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTaGTTTCAGGGGCACATTACTCACTACCACCTCTAT +
Preference number: 3 (lower is better)
Translates to: RQQIKEACQSPH*FQGHITHYHLY
Trigger: ATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCAGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
3UTR CCA 72 bp AATATTGTGAGCCAGAGGAACCTAAACATACACTCCTaGTCTCATTCTTCATGGAATAAAGTTGCCTCTGTT +
Preference number: 3 (lower is better)
Translates to: NIVSQRNLNIHS*SHSSWNKVASV
Trigger: AACAGAGGCAACTTTATTCCATGAAGAATGAGACCAGGAGTGTATGTTTAGGTTCCTCTGGCTCACAATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS-3UTR CCA 90 bp GGGAGGGGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGAGAGGCGAGGGCATGTaGGGAACTTCCGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: GRGGKKIPRQRYVKPTEPRGEGM*GTSGMA
Trigger: GGCCATGCCGGAAGTTCCCCACATGCCCTCGCCTCT...CGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp GATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGTGGTCCGGAGCATGGTaGTGGCCGGACTGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: DGPLRHQGIEEELQVTQVWSGAW*WPDWGS
Trigger: ACTGCCCCAGTCCGGCCATCACCATGCTCCGGACCA...CACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
3UTR CAA 72 bp CCTCCCCCAGAGGAAATTCCTTCGTGGGCTTCTGGGTaGCATACATCCGGGTCTCCATGGGGCAGTCCTGAC +
Preference number: 4 (lower is better)
Translates to: PPPEEIPSWASG*HTSGSPWGSPD
Trigger: GTCAGGACTGCCCCATGGAGACCCGGATGTATGCAACCCAGAAGCCCACGAAGGAATTTCCTCTGGGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS-3UTR TCA 90 bp CTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTTGGTCCGGAGCATGGTaGTGGCCGGACTGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LSSHKRWATAAPRHRGRAWSGAW*WPDWGS
Trigger: ACTGCCCCAGTCCGGCCATCACCATGCTCCGGACCA...AGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp GGTGCATCACTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATATGGTCCGGAGCATGGTaGTGGCCGGACTGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: GASLCLPIKDGPLRHQGIWSGAW*WPDWGS
Trigger: ACTGCCCCAGTCCGGCCATCACCATGCTCCGGACCA...TATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAGTGATGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp GGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTCAGGTATGTGAAGCCCACTaGGCCGTGGGCTCAGCCATG +
Preference number: 4 (lower is better)
Translates to: GKKIPRQRYVKPTEPWAQVCEAH*AVGSAM
Trigger: CATGGCTGAGCCCACGGCTCAGTGGGCTTCACATAC...CTGAGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp CCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACCACCAGCACCAGCTaGCGGGACGCTCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PIKDGPLRHQGIEEELQVTTSTS*RDALPS
Trigger: GGAGGGGAGAGCGTCCCGGCAGCTGGTGCTGGTGGT...AACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp CACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACAGCAGCGGGAGAGGCGAGGGCATGTaGGGAACTTCCGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: HPLQNPSQLKFNQPHSSGRGEGM*GTSGMA
Trigger: GGCCATGCCGGAAGTTCCCCACATGCCCTCGCCTCT...CCCGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp AGGGGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGTGGGCTCAGCCATGGTaGTCTGGTCCCAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: RGGKKIPRQRYVKPTEPWWAQPW*SGPRER
Trigger: TCTTTCCCTGGGACCAGATCACCATGGCTGAGCCCA...CCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp TCACAGCTCAAGTTTAATCAACCTCACAGCAGCGGGAAGGTGCATCACTCTGTCACCACCAGCACCAGCTaGCGGGACGCTCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SQLKFNQPHSSGKVHHSVTTSTS*RDALPS
Trigger: GGAGGGGAGAGCGTCCCGGCAGCTGGTGCTGGTGGT...GACAGAGTGATGCACCTTCCCGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp TGGTTTCAGGGGCACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGACCACCAGCACCAGCTaGCGGGACGCTCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: WFQGHITHYHLYAMSHPLTTSTS*RDALPS
Trigger: GGAGGGGAGAGCGTCCCGGCAGCTGGTGCTGGTGGT...CAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp GATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGGGCAAGGCCAAGCCCTaGATTGGGGCCAATGAGACC +
Preference number: 4 (lower is better)
Translates to: DGPLRHQGIEEELQVTQVGKAKP*IGANET
Trigger: GGTCTCATTGGCCCCAATGCAGGGCTTGGCCTTGCC...CACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp GGGAGGGGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGAGGAGCACCTTCTGCTaGTACTCCTCATGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: GRGGKKIPRQRYVKPTEPRSTFC*YSSWSG
Trigger: GCCTGACCATGAGGAGTAGCAGCAGAAGGTGCTCCT...CGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCCCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp AGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTAGAGGCGAGGGCATGTaGGGAACTTCCGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: RWATAAPRHRGRATSYTGRGEGM*GTSGMA
Trigger: GGCCATGCCGGAAGTTCCCCACATGCCCTCGCCTCT...ACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp CTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATGGTCCGGAGCATGGTaGTGGCCGGACTGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LRHQGIEEELQVTQVRRVWSGAW*WPDWGS
Trigger: ACTGCCCCAGTCCGGCCATCACCATGCTCCGGACCA...TACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp CTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGCCAGGCAGAGGTATGTaGAGCCCACTGAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: LQVTQVRRVSGTVSMGGEPGRGM*SPLSRG
Trigger: CCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGG...CTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp GGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTCAGAGAGGGGAGGGAGTCTaGCCAGACGAAGGAAACTCA +
Preference number: 4 (lower is better)
Translates to: GKKIPRQRYVKPTEPWAQRGEGV*PDEGNS
Trigger: TGAGTTTCCTTCGTCTGGGCAGACTCCCTCCCCTCT...CTGAGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp ATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTGGACCACCAGCACCAGCTaGCGGGACGCTCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: MPEKIRQQIKEACQSPHWTTSTS*RDALPS
Trigger: GGAGGGGAGAGCGTCCCGGCAGCTGGTGCTGGTGGT...CCAGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GACCATGAGCCAGGGAAAACCGATGGCCTTTACAATGGCACCACCGGTGGATGGCTCCTGCAGCCTTTATaGAAGAGGGGAGGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: DHEPGKTDGLYNGTTGGWLLQPL*KRGGSL
Trigger: CAGACTCCCTCCCCTCTTCCATAAAGGCTGCAGGAG...CCATCCACCGGTGGTGCCATTGTAAAGGCCATCGGTTTTCCCTGGCTCATGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS-3UTR CCA 90 bp AGCCAGGGAAAACCGATGGCCTTTACAATGGCACCACCGGTGGATGGACCTATAGGGGAACTTCCGGCATaGCCGAGGTGCAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: SQGKPMAFTMAPPVDGPIGELPA*PRCREE
Trigger: CTCTTCTCTGCACCTCGGCCATGCCGGAAGTTCCCC...TATAGGTCCATCCACCGGTGGTGCCATTGTAAAGGCCATCGGTTTTCCCTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS-3UTR CCA 90 bp GGTGCATCACTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGGGGAACTTCCGGCATaGCCGAGGTGCAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: GASLCLPIKDGPLRHQGIGELPA*PRCREE
Trigger: CTCTTCTCTGCACCTCGGCCATGCCGGAAGTTCCCC...TATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAGTGATGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GACCATGAGCCAGGGAAAACCGATGGCCTTTACAATGGCACCACCGGTGGATGGTGGCTGGAGGTGGGATaGTGCTGGCAGTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: DHEPGKTDGLYNGTTGGWWLEVG*CWQCHS
Trigger: TGAATGACACTGCCAGCACCATCCCACCTCCAGCCA...CCATCCACCGGTGGTGCCATTGTAAAGGCCATCGGTTTTCCCTGGCTCATGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS-3UTR CCA 90 bp ATGGTCAGGCTCCTCATCACTGTCCTCCCCCAGAGGAAATTCCTTCGTGGGCTTCTGAGATGGCTTCAGTaGCTGGAGGTGGGATGGTGC +
Preference number: 4 (lower is better)
Translates to: MVRLLITVLPQRKFLRGLLRWLQ*LEVGWC
Trigger: GCACCATCCCACCTCCAGCCACTGAAGCCATCTCAG...AAGCCCACGAAGGAATTTCCTCTGGGGGAGGACAGTGATGAGGAGCCTGACCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS-3UTR CCA 90 bp AGGGGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGGCACCACCGGTGGATaGACCTATAGCAAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: RGGKKIPRQRYVKPTEPWGTTGG*TYSKAH
Trigger: ATGGGCTTTGCTATAGGTCCATCCACCGGTGGTGCC...CCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTGGCACCACCGGTGGATaGACCTATAGCAAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: GGKKIPRQRYVKPTEPWAGTTGG*TYSKAH
Trigger: ATGGGCTTTGCTATAGGTCCATCCACCGGTGGTGCC...AGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTCAGACATCCGGGTCTCCATaGGGCAGTCCTGACTCAGAA +
Preference number: 4 (lower is better)
Translates to: GKKIPRQRYVKPTEPWAQTSGSP*GSPDSE
Trigger: TTCTGAGTCAGGACTGCCCCATGGAGACCCGGATGT...CTGAGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTCAGTCCTTCGTGGGCTTCTaGGTTGCATACATCCGGGTC +
Preference number: 4 (lower is better)
Translates to: GKKIPRQRYVKPTEPWAQSFVGF*VAYIRV
Trigger: GACCCGGATGTATGCAACCCAGAAGCCCACGAAGGA...CTGAGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp CTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTGTGTGGGCTCCAGGATaGCCACCCCCATGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LSSHKRWATAAPRHRGRAVWAPG*PPPCWQ
Trigger: TTGCCAACATGGGGGTGGCCATCCTGGAGCCCACAC...AGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp GAACACGTTGAGGAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCATGGTCCGGAGCATGGTaGTGGCCGGACTGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: EHVEEKRVTLFRSVGTMPWSGAW*WPDWGS
Trigger: ACTGCCCCAGTCCGGCCATCACCATGCTCCGGACCA...TGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTCCTCAACGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp GATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGGGCCCACGAATGGGTTaGCCAGAAGTTGCATCACAG +
Preference number: 4 (lower is better)
Translates to: DGPLRHQGIEEELQVTQVGPRMG*PEVASQ
Trigger: CTGTGATGCAACTTCTGGTCAACCCATTCGTGGGCC...CACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp CTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGTGGGCTCAGCCATGGTaGTCTGGTCCCAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: LCLPIKDGPLRHQGIEEEWAQPW*SGPRER
Trigger: TCTTTCCCTGGGACCAGATCACCATGGCTGAGCCCA...CTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp CAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGGAAGTATGTGAAGCCCACTaGGCCGTGGGCTCAGCCATG +
Preference number: 4 (lower is better)
Translates to: QVTQVRRVSGTVSMGGEEVCEAH*AVGSAM
Trigger: CATGGCTGAGCCCACGGCTCAGTGGGCTTCACATAC...TTCCTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp AGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATACCACCAGCACCAGCTaGCGGGACGCTCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: RGRATSYTGEKSIRDSVHTTSTS*RDALPS
Trigger: GGAGGGGAGAGCGTCCCGGCAGCTGGTGCTGGTGGT...ATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp ATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCACCACCAGCACCAGCTaGCGGGACGCTCTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: IEEELQVTQVRRVSGTVSTTSTS*RDALPS
Trigger: GGAGGGGAGAGCGTCCCGGCAGCTGGTGCTGGTGGT...GGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp GGGAGGGGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGAAGGCTGTAGGATaGAAAGCTGGAGTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: GRGGKKIPRQRYVKPTEPWKAVG*KAGVLH
Trigger: ATGGAGCACTCCAGCTTTGCATCCTACAGCCTTCCA...CGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp CCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTGGCAAGGCCAAGCCCTaGATTGGGGCCAATGAGACC +
Preference number: 4 (lower is better)
Translates to: PIKDGPLRHQGIEEELQVGKAKP*IGANET
Trigger: GGTCTCATTGGCCCCAATGCAGGGCTTGGCCTTGCC...AACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp AGGGGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGACAGCAGCGGGAAGGTaGATCACTCTGTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: RGGKKIPRQRYVKPTEPWTAAGR*ITLSSH
Trigger: ATGGGAAGACAGAGTGATGCACCTTCCCGCTGCTGT...CCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp GGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTCAGAAAGCAGATGGACCCTaGAGCCACCAGGATGTAAGG +
Preference number: 4 (lower is better)
Translates to: GKKIPRQRYVKPTEPWAQKADGP*SHQDVR
Trigger: CCTTACATCCTGGTGGCTGCAGGGTCCATCTGCTTT...CTGAGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACAGCAGCGGGCTCCTGCAGCCTTTATaGAAGAGGGGAGGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: HPLQNPSQLKFNQPHSSGLLQPL*KRGGSL
Trigger: CAGACTCCCTCCCCTCTTCCATAAAGGCTGCAGGAG...CCCGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp TCAGGGGCACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGAAAGAGGCGAGGGCATGTaGGGAACTTCCGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: SGAHYSLPPLCNESPLAERGEGM*GTSGMA
Trigger: GGCCATGCCGGAAGTTCCCCACATGCCCTCGCCTCT...TTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTGCCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTGAGGTGGGATGGTGCTaGCAGTGTCATTCATCCATG +
Preference number: 4 (lower is better)
Translates to: GGKKIPRQRYVKPTEPWAEVGWC*QCHSSM
Trigger: CATGGATGAATGACACTGCCAGCACCATCCCACCTC...AGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGTGGCTGGAGGTGGGATaGTGCTGGCAGTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: DGPLRHQGIEEELQVTQVWLEVG*CWQCHS
Trigger: TGAATGACACTGCCAGCACCATCCCACCTCCAGCCA...CACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GGTGCATCACTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATATTCAGTGGCTGGAGGTaGGATGGTGCTGGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: GASLCLPIKDGPLRHQGIFSGWR*DGAGSV
Trigger: GACACTGCCAGCACCATCCCACCTCCAGCCACTGAA...TATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAGTGATGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp AGCCAGGGAAAACCGATGGCCTTTACAATGGCACCACCGGTGGATGGACCTATACCATACACCGAGGTGTaGCGTAGATCCACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: SQGKPMAFTMAPPVDGPIPYTEV*RRSTRC
Trigger: GCACCTGGTGGATCTACGCCACACCTCGGTGTATGG...TATAGGTCCATCCACCGGTGGTGCCATTGTAAAGGCCATCGGTTTTCCCTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS-3UTR CCA 90 bp GGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTGCCAGGGAAAACCGATaGCCTTTACAATGGCACCAC +
Preference number: 4 (lower is better)
Translates to: GGKKIPRQRYVKPTEPWAARENR*PLQWHH
Trigger: GTGGTGCCATTGTAAAGGCCATCGGTTTTCCCTGGC...AGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp AGGGGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGCAGGGACAGTGTCCATaGGAGGGGAGGAAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: RGGKKIPRQRYVKPTEPWQGQCP*EGRKED
Trigger: ATCTTCTTTCCTCCCCTCCCATGGACACTGTCCCTG...CCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp GGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTTTGCATCACAGCCTTTaGAGCAAACAGAACCCCGAC +
Preference number: 4 (lower is better)
Translates to: GGKKIPRQRYVKPTEPWALHHSL*SKQNPD
Trigger: GTCGGGGTTCTGTTTGCTTCAAAGGCTGTGATGCAA...AGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp GGTGCATCACTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGGCCCACGAATGGGTTaGCCAGAAGTTGCATCACAG +
Preference number: 4 (lower is better)
Translates to: GASLCLPIKDGPLRHQGIGPRMG*PEVASQ
Trigger: CTGTGATGCAACTTCTGGTCAACCCATTCGTGGGCC...TATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAGTGATGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp CTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTGGCCCACGAATGGGTTaGCCAGAAGTTGCATCACAG +
Preference number: 4 (lower is better)
Translates to: LSSHKRWATAAPRHRGRAGPRMG*PEVASQ
Trigger: CTGTGATGCAACTTCTGGTCAACCCATTCGTGGGCC...AGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp GGTGCATCACTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAATCCAATCCTGTTGGTaGGAGGGCCCACGAATGGGT +
Preference number: 4 (lower is better)
Translates to: GASLCLPIKDGPLRHQGIIQSCW*EGPRMG
Trigger: ACCCATTCGTGGGCCCTCTCACCAACAGGATTGGAT...TATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAGTGATGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp GATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGGAAGATCCAATGCCTTaGAGGGTTCGGGCCACAAAG +
Preference number: 4 (lower is better)
Translates to: DGPLRHQGIEEELQVTQVEDPMP*RVRATK
Trigger: CTTTGTGGCCCGAACCCTTCAAGGCATTGGATCTTC...CACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp ATGGTCAGGCTCCTCATCACTGTCCTCCCCCAGAGGAAATTCCTTCGTGGGCTTGAAGATCCAATGCCTTaGAGGGTTCGGGCCACAAAG +
Preference number: 4 (lower is better)
Translates to: MVRLLITVLPQRKFLRGLEDPMP*RVRATK
Trigger: CTTTGTGGCCCGAACCCTTCAAGGCATTGGATCTTC...AAGCCCACGAAGGAATTTCCTCTGGGGGAGGACAGTGATGAGGAGCCTGACCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS-3UTR TCA 90 bp CTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGAGAGGTTGGTGCCAATaGGGTAGGACACACTGGCAG +
Preference number: 4 (lower is better)
Translates to: LCLPIKDGPLRHQGIEEERGWCQ*GRTHWQ
Trigger: CTGCCAGTGTGTCCTACCTCATTGGCACCAACCTCT...CTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp CAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGGAATGGGCTCAGCCATGGTaGTCTGGTCCCAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: QVTQVRRVSGTVSMGGEEWAQPW*SGPRER
Trigger: TCTTTCCCTGGGACCAGATCACCATGGCTGAGCCCA...TTCCTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp CGTCACAGCTCAAGTTTAATCAACCTCACAGCAGCGGGAAGGTGCATCACTCTGTGGGCTCAGCCATGGTaGTCTGGTCCCAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: RHSSSLINLTAAGRCITLWAQPW*SGPRER
Trigger: TCTTTCCCTGGGACCAGATCACCATGGCTGAGCCCA...CAGAGTGATGCACCTTCCCGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp CTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTAGTATGTGAAGCCCACTaGGCCGTGGGCTCAGCCATG +
Preference number: 4 (lower is better)
Translates to: LRHQGIEEELQVTQVRRVVCEAH*AVGSAM
Trigger: CATGGCTGAGCCCACGGCTCAGTGGGCTTCACATAC...TACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp TGGTTTCAGGGGCACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGGTATGTGAAGCCCACTaGGCCGTGGGCTCAGCCATG +
Preference number: 4 (lower is better)
Translates to: WFQGHITHYHLYAMSHPLVCEAH*AVGSAM
Trigger: CATGGCTGAGCCCACGGCTCAGTGGGCTTCACATAC...CAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp AGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGTATGTGAAGCCCACTaGGCCGTGGGCTCAGCCATG +
Preference number: 4 (lower is better)
Translates to: RATSYTGEKSIRDSVHGRVCEAH*AVGSAM
Trigger: CATGGCTGAGCCCACGGCTCAGTGGGCTTCACATAC...CCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp ATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACCAGGCAGAGGTATGTaGAGCCCACTGAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: IKDGPLRHQGIEEELQVTPGRGM*SPLSRG
Trigger: CCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGG...TGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp GATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGCAGCTACAGGTCTCCTaGAGCCTTTATGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: DGPLRHQGIEEELQVTQVQLQVS*SLYGRG
Trigger: CCCTCTTCCATAAAGGCTGCAGGAGACCTGTAGCTG...CACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp GGTGCATCACTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATACTGGAGGTGGGATGGTaGTGGCAGTGTCATTCATCC +
Preference number: 4 (lower is better)
Translates to: GASLCLPIKDGPLRHQGILEVGW*WQCHSS
Trigger: GGATGAATGACACTGCCAGCACCATCCCACCTCCAG...TATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAGTGATGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp GCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCGGCAAGGCCAAGCCCTaGATTGGGGCCAATGAGACC +
Preference number: 4 (lower is better)
Translates to: AAPRHRGRATSYTGEKSIGKAKP*IGANET
Trigger: GGTCTCATTGGCCCCAATGCAGGGCTTGGCCTTGCC...GATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp CTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCGTGGGCTTCTGGGTTaGATACATCCGGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LCLPIKDGPLRHQGIEEERGLLG*IHPGLH
Trigger: ATGGAGACCCGGATGTATGCAACCCAGAAGCCCACG...CTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp AGGGGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGTCAAGGAGCACCTTCTaGTGCTACTCCTCATGGTCA +
Preference number: 4 (lower is better)
Translates to: RGGKKIPRQRYVKPTEPWSRSTF*CYSSWS
Trigger: TGACCATGAGGAGTAGCAGCAGAAGGTGCTCCTTGA...CCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp GATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGACAGCAGCGGGAAGGTaGATCACTCTGTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: DGPLRHQGIEEELQVTQVTAAGR*ITLSSH
Trigger: ATGGGAAGACAGAGTGATGCACCTTCCCGCTGCTGT...CACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp GGTCTCCATGGGGCAGTCCTGACTCAGAATAGCAAGCTTCTCTTCCTTTGCCGGAAAGCAGATGGACCCTaGAGCCACCAGGATGTAAGG +
Preference number: 4 (lower is better)
Translates to: GLHGAVLTQNSKLLFLCRKADGP*SHQDVR
Trigger: CCTTACATCCTGGTGGCTGCAGGGTCCATCTGCTTT...CCGGCAAAGGAAGAGAAGCTTGCTATTCTGAGTCAGGACTGCCCCATGGAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS-3UTR GCA 90 bp GTCACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACAGCAGCGAAAGCTAGACCCAGCTaGCACTTGGGGGAGCACATG +
Preference number: 4 (lower is better)
Translates to: VTPCRTRHSSSLINLTAAKARPS*HLGEHM
Trigger: CATGTGCTCCCCCAAGTGGCAGCTGGGTCTAGCTTT...CGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp CTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGAAAGCTAGACCCAGCTaGCACTTGGGGGAGCACATG +
Preference number: 4 (lower is better)
Translates to: LCLPIKDGPLRHQGIEEEKARPS*HLGEHM
Trigger: CATGTGCTCCCCCAAGTGGCAGCTGGGTCTAGCTTT...CTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTCCTGCAGCCTTTATaGAAGAGGGGAGGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: LCLPIKDGPLRHQGIEEELLQPL*KRGGSL
Trigger: CAGACTCCCTCCCCTCTTCCATAAAGGCTGCAGGAG...CTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GTCACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACAGCAGCGTCCTTCAGCAACCGCTaGGGAGCATCCAGAATGGTC +
Preference number: 4 (lower is better)
Translates to: VTPCRTRHSSSLINLTAASFSNR*GASRMV
Trigger: GACCATTCTGGATGCTCCCCAGCGGTTGCTGAAGGA...CGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTTCCTTCAGCAACCGCTaGGGAGCATCCAGAATGGTC +
Preference number: 4 (lower is better)
Translates to: LSSHKRWATAAPRHRGRASFSNR*GASRMV
Trigger: GACCATTCTGGATGCTCCCCAGCGGTTGCTGAAGGA...AGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp CTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGTCCTTCAGCAACCGCTaGGGAGCATCCAGAATGGTC +
Preference number: 4 (lower is better)
Translates to: LCLPIKDGPLRHQGIEEESFSNR*GASRMV
Trigger: GACCATTCTGGATGCTCCCCAGCGGTTGCTGAAGGA...CTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp TGGTTTCAGGGGCACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGGGGGAACTTCCGGCATaGCCGAGGTGCAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: WFQGHITHYHLYAMSHPLGELPA*PRCREE
Trigger: CTCTTCTCTGCACCTCGGCCATGCCGGAAGTTCCCC...CAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp TCAAGTTTAATCAACCTCACAGCAGCGGGAAGGTGCATCACTCTGTCTTCCCATAGAGGCGAGGGCATGTaGGGAACTTCCGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: SSLINLTAAGRCITLSSHRGEGM*GTSGMA
Trigger: GGCCATGCCGGAAGTTCCCCACATGCCCTCGCCTCT...ATGGGAAGACAGAGTGATGCACCTTCCCGCTGCTGTGAGGTTGATTAAACTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp ACTCCTCATGGTCAGGCTCCTCATCACTGTCCTCCCCCAGAGGAAATTCCTTCGGAGGTGGGATGGTGCTaGCAGTGTCATTCATCCATG +
Preference number: 4 (lower is better)
Translates to: TPHGQAPHHCPPPEEIPSEVGWC*QCHSSM
Trigger: CATGGATGAATGACACTGCCAGCACCATCCCACCTC...CGAAGGAATTTCCTCTGGGGGAGGACAGTGATGAGGAGCCTGACCATGAGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS-3UTR CCA 90 bp AGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTTGGCTGGAGGTGGGATaGTGCTGGCAGTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: RWATAAPRHRGRATSYTGWLEVG*CWQCHS
Trigger: TGAATGACACTGCCAGCACCATCCCACCTCCAGCCA...ACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GGTGCATCACTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATATGGCTGGAGGTGGGATaGTGCTGGCAGTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: GASLCLPIKDGPLRHQGIWLEVG*CWQCHS
Trigger: TGAATGACACTGCCAGCACCATCCCACCTCCAGCCA...TATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAGTGATGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp CGTCACAGCTCAAGTTTAATCAACCTCACAGCAGCGGGAAGGTGCATCACTCTGTTCAGTGGCTGGAGGTaGGATGGTGCTGGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: RHSSSLINLTAAGRCITLFSGWR*DGAGSV
Trigger: GACACTGCCAGCACCATCCCACCTCCAGCCACTGAA...CAGAGTGATGCACCTTCCCGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CATCATGAATTCAAGGAGCACCTTCTGCTGCTACTCCTCATGGTCAGGCTCCTCTTCAGTGGCTGGAGGTaGGATGGTGCTGGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: HHEFKEHLLLLLLMVRLLFSGWR*DGAGSV
Trigger: GACACTGCCAGCACCATCCCACCTCCAGCCACTGAA...GAGGAGCCTGACCATGAGGAGTAGCAGCAGAAGGTGCTCCTTGAATTCATGATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437980.3
ENST00000517776.5
CDS-3UTR CCA 90 bp AAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGATGGCTTCAGTGGCTaGAGGTGGGATGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: KRWATAAPRHRGRATSYTDGFSG*RWDGAG
Trigger: GCCAGCACCATCCCACCTCCAGCCACTGAAGCCATC...TGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp TGGTTTCAGGGGCACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGGATGGCTTCAGTGGCTaGAGGTGGGATGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: WFQGHITHYHLYAMSHPLDGFSG*RWDGAG
Trigger: GCCAGCACCATCCCACCTCCAGCCACTGAAGCCATC...CAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTCTGAGATGGCTTCAGTaGCTGGAGGTGGGATGGTGC +
Preference number: 4 (lower is better)
Translates to: PIKDGPLRHQGIEEELQVLRWLQ*LEVGWC
Trigger: GCACCATCCCACCTCCAGCCACTGAAGCCATCTCAG...AACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp CTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGCTGAGATGGCTTCAGTaGCTGGAGGTGGGATGGTGC +
Preference number: 4 (lower is better)
Translates to: LQVTQVRRVSGTVSMGGELRWLQ*LEVGWC
Trigger: GCACCATCCCACCTCCAGCCACTGAAGCCATCTCAG...CTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp CAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGGAACTGAGATGGCTTCAGTaGCTGGAGGTGGGATGGTGC +
Preference number: 4 (lower is better)
Translates to: QVTQVRRVSGTVSMGGEELRWLQ*LEVGWC
Trigger: GCACCATCCCACCTCCAGCCACTGAAGCCATCTCAG...TTCCTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp AGGGGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGCATCAGTGTAGACACTaGCCAGCATTCCAAGACCTG +
Preference number: 4 (lower is better)
Translates to: RGGKKIPRQRYVKPTEPWHQCRH*PAFQDL
Trigger: CAGGTCTTGGAATGCTGGCCAGTGTCTACACTGATG...CCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GGTGCATCACTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAAGAGGGGAGTCCCCTTaGCACTCTCAGGAGAGACTT +
Preference number: 4 (lower is better)
Translates to: GASLCLPIKDGPLRHQGIRGESP*HSQERL
Trigger: AAGTCTCTCCTGAGAGTGCCAAGGGGACTCCCCTCT...TATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAGTGATGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp AGGGGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGACCGACCCATCTTGTTaGCCAACACACCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: RGGKKIPRQRYVKPTEPWTDPSC*PTHQRG
Trigger: ACCTCTTTGGTGTGTTGGCCAACAAGATGGGTCGGT...CCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp CTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGCCATACACCGAGGTGTaGCGTAGATCCACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LQVTQVRRVSGTVSMGGEPYTEV*RRSTRC
Trigger: GCACCTGGTGGATCTACGCCACACCTCGGTGTATGG...CTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp CAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGGAACCATACACCGAGGTGTaGCGTAGATCCACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: QVTQVRRVSGTVSMGGEEPYTEV*RRSTRC
Trigger: GCACCTGGTGGATCTACGCCACACCTCGGTGTATGG...TTCCTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp CTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTGGCACCACCGGTGGATaGACCTATAGCAAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: LSSHKRWATAAPRHRGRAGTTGG*TYSKAH
Trigger: ATGGGCTTTGCTATAGGTCCATCCACCGGTGGTGCC...AGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GGGAGGGGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGGAGGAAATTCCTTCGTaGGCTTCTGGGTTGCATACA +
Preference number: 4 (lower is better)
Translates to: GRGGKKIPRQRYVKPTEPEEIPS*ASGLHT
Trigger: TGTATGCAACCCAGAAGCCCACGAAGGAATTTCCTC...CGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCCCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp ACTCCTCATGGTCAGGCTCCTCATCACTGTCCTCCCCCAGAGGAAATTCCTTCGTGCTGCTACTCCTCATaGTCAGGCTCCTCATCACTG +
Preference number: 4 (lower is better)
Translates to: TPHGQAPHHCPPPEEIPSCCYSS*SGSSSL
Trigger: CAGTGATGAGGAGCCTGACCATGAGGAGTAGCAGCA...CGAAGGAATTTCCTCTGGGGGAGGACAGTGATGAGGAGCCTGACCATGAGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS-3UTR CCA 90 bp AGGGGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGCGAAGGAAACTCACTTaGAGCCCATGTTGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: RGGKKIPRQRYVKPTEPWRRKLT*SPCWCE
Trigger: CTCACACCAACATGGGCTCCAAGTGAGTTTCCTTCG...CCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276373.10
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GGTGCATCACTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATATGTTGGCAAAGCAGATaGACCCTGCAGCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: GASLCLPIKDGPLRHQGICWQSR*TLQPPG
Trigger: TCCTGGTGGCTGCAGGGTCCATCTGCTTTGCCAACA...TATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAGTGATGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp ACTCCTCATGGTCAGGCTCCTCATCACTGTCCTCCCCCAGAGGAAATTCCTTCGCCACGGTGTTGTTGTTaGAGAAGGAGAAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: TPHGQAPHHCPPPEEIPSPRCCC*RRRRWW
Trigger: CCACCATCTTCTCCTTCTTCAACAACAACACCGTGG...CGAAGGAATTTCCTCTGGGGGAGGACAGTGATGAGGAGCCTGACCATGAGGAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS-3UTR TCA 90 bp CGTCACAGCTCAAGTTTAATCAACCTCACAGCAGCGGGAAGGTGCATCACTCTGGGCCCACGAATGGGTTaGCCAGAAGTTGCATCACAG +
Preference number: 4 (lower is better)
Translates to: RHSSSLINLTAAGRCITLGPRMG*PEVASQ
Trigger: CTGTGATGCAACTTCTGGTCAACCCATTCGTGGGCC...CAGAGTGATGCACCTTCCCGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp CTTGTCAGTCACCCCACTGGTTTCAGGGGCACATTACTCACTACCACCTCTATGATCCAATCCTGTTGGTaGGAGGGCCCACGAATGGGT +
Preference number: 4 (lower is better)
Translates to: LVSHPTGFRGTLLTTTSMIQSCW*EGPRMG
Trigger: ACCCATTCGTGGGCCCTCTCACCAACAGGATTGGAT...CATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCAGTGGGGTGACTGACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp CTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGAGAGGTTGGTGCCAATaGGGTAGGACACACTGGCAG +
Preference number: 4 (lower is better)
Translates to: LQVTQVRRVSGTVSMGGERGWCQ*GRTHWQ
Trigger: CTGCCAGTGTGTCCTACCTCATTGGCACCAACCTCT...CTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp CCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTAGAGGTTGGTGCCAATaGGGTAGGACACACTGGCAG +
Preference number: 4 (lower is better)
Translates to: PIKDGPLRHQGIEEELQVRGWCQ*GRTHWQ
Trigger: CTGCCAGTGTGTCCTACCTCATTGGCACCAACCTCT...AACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp AGGGGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGTCACTGAGGCATCATaGATTCAAGGAGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: RGGKKIPRQRYVKPTEPWVTEAS*IQGAPS
Trigger: AGAAGGTGCTCCTTGAATTCATGATGCCTCAGTGAC...CCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp TGGTTTCAGGGGCACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGTGGGCTCAGCCATGGTaGTCTGGTCCCAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: WFQGHITHYHLYAMSHPLWAQPW*SGPRER
Trigger: TCTTTCCCTGGGACCAGATCACCATGGCTGAGCCCA...CAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp AAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACATGGGCTCAGCCATGGTaGTCTGGTCCCAGGGAAAGA +
Preference number: 4 (lower is better)
Translates to: KRWATAAPRHRGRATSYTWAQPW*SGPRER
Trigger: TCTTTCCCTGGGACCAGATCACCATGGCTGAGCCCA...TGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp AGGGGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGCGGGAAAGAACACGTTaGGGAAAAGAGGGTAACACT +
Preference number: 4 (lower is better)
Translates to: RGGKKIPRQRYVKPTEPWRERTR*GKEGNT
Trigger: AGTGTTACCCTCTTTTCCTCAACGTGTTCTTTCCCG...CCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp GGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTCGGGAAAGAACACGTTaGGGAAAAGAGGGTAACACT +
Preference number: 4 (lower is better)
Translates to: GGKKIPRQRYVKPTEPWARERTR*GKEGNT
Trigger: AGTGTTACCCTCTTTTCCTCAACGTGTTCTTTCCCG...AGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp GGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTCAGCGGGAAAGAACACGTTaGGGAAAAGAGGGTAACACT +
Preference number: 4 (lower is better)
Translates to: GKKIPRQRYVKPTEPWAQRERTR*GKEGNT
Trigger: AGTGTTACCCTCTTTTCCTCAACGTGTTCTTTCCCG...CTGAGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp CAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGGAAAGAGGGGAGGGAGTCTaGCCAGACGAAGGAAACTCA +
Preference number: 4 (lower is better)
Translates to: QVTQVRRVSGTVSMGGEERGEGV*PDEGNS
Trigger: TGAGTTTCCTTCGTCTGGGCAGACTCCCTCCCCTCT...TTCCTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp AGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTCAGCTACAGGTCTCCTaGAGCCTTTATGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: RWATAAPRHRGRATSYTGQLQVS*SLYGRG
Trigger: CCCTCTTCCATAAAGGCTGCAGGAGACCTGTAGCTG...ACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp CCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTCTGGAGGTGGGATGGTaGTGGCAGTGTCATTCATCC +
Preference number: 4 (lower is better)
Translates to: PIKDGPLRHQGIEEELQVLEVGW*WQCHSS
Trigger: GGATGAATGACACTGCCAGCACCATCCCACCTCCAG...AACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp GGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTGGGTTGACCAGAAGTTaGATCACAGCCTTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: GGKKIPRQRYVKPTEPWAGLTRS*ITAFEA
Trigger: TGCTTCAAAGGCTGTGATGCAACTTCTGGTCAACCC...AGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp GATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGCAGGATGAGGAAGGGTaGAGACTTCCCAACAAACTC +
Preference number: 4 (lower is better)
Translates to: DGPLRHQGIEEELQVTQVQDEEG*RLPNKL
Trigger: GAGTTTGTTGGGAAGTCTGCACCCTTCCTCATCCTG...CACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp CTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGAGGAGCACCTTCTGCTaGTACTCCTCATGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: LQVTQVRRVSGTVSMGGERSTFC*YSSWSG
Trigger: GCCTGACCATGAGGAGTAGCAGCAGAAGGTGCTCCT...CTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp AGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTTCTTGGAGCCCATGTTaGTGTGAGGCACTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: RWATAAPRHRGRATSYTGSWSPC*CEALSE
Trigger: CTCACTGAGTGCCTCACACCAACATGGGCTCCAAGA...ACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS-3UTR CCA 90 bp AGGGGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGTGTCATATAGGAAGGTaGGCACAATTGGCACCACCA +
Preference number: 4 (lower is better)
Translates to: RGGKKIPRQRYVKPTEPWCHIGR*AQLAPP
Trigger: TGGTGGTGCCAATTGTGCCCACCTTCCTATATGACA...CCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp ATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTGGGGGGAACTTCCGGCATaGCCGAGGTGCAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: MPEKIRQQIKEACQSPHWGELPA*PRCREE
Trigger: CTCTTCTCTGCACCTCGGCCATGCCGGAAGTTCCCC...CCAGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCAT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp AGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATAGAGGCGAGGGCATGTaGGGAACTTCCGGCATGGCC +
Preference number: 4 (lower is better)
Translates to: RGRATSYTGEKSIRDSVHRGEGM*GTSGMA
Trigger: GGCCATGCCGGAAGTTCCCCACATGCCCTCGCCTCT...ATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp TCACAGCTCAAGTTTAATCAACCTCACAGCAGCGGGAAGGTGCATCACTCTGTCTTCAGTGGCTGGAGGTaGGATGGTGCTGGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: SQLKFNQPHSSGKVHHSVFSGWR*DGAGSV
Trigger: GACACTGCCAGCACCATCCCACCTCCAGCCACTGAA...GACAGAGTGATGCACCTTCCCGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGATGGCTTCAGTGGCTaGAGGTGGGATGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: EELQVTQVRRVSGTVSMGDGFSG*RWDGAG
Trigger: GCCAGCACCATCCCACCTCCAGCCACTGAAGCCATC...TCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp AGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGCTGAGATGGCTTCAGTaGCTGGAGGTGGGATGGTGC +
Preference number: 4 (lower is better)
Translates to: RATSYTGEKSIRDSVHGRLRWLQ*LEVGWC
Trigger: GCACCATCCCACCTCCAGCCACTGAAGCCATCTCAG...CCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp CAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGGAAAGAGGGGAGTCCCCTTaGCACTCTCAGGAGAGACTT +
Preference number: 4 (lower is better)
Translates to: QVTQVRRVSGTVSMGGEERGESP*HSQERL
Trigger: AAGTCTCTCCTGAGAGTGCCAAGGGGACTCCCCTCT...TTCCTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GGTGCATCACTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAAATCCACCATGCCTATaGCAAGGCCAAGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: GASLCLPIKDGPLRHQGINPPCL*QGQALH
Trigger: ATGCAGGGCTTGGCCTTGCCATAGGCATGGTGGATT...TATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAGTGATGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GTCACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACAGCAGCGGCCAGGGAAAACCGATaGCCTTTACAATGGCACCAC +
Preference number: 4 (lower is better)
Translates to: VTPCRTRHSSSLINLTAAARENR*PLQWHH
Trigger: GTGGTGCCATTGTAAAGGCCATCGGTTTTCCCTGGC...CGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCAGGGACAGTGTCCATaGGAGGGGAGGAAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: LCLPIKDGPLRHQGIEEEQGQCP*EGRKED
Trigger: ATCTTCTTTCCTCCCCTCCCATGGACACTGTCCCTG...CTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GGTGCATCACTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATATCTTCCCATAAAAGATaGGCCACTGCGGCACCAAGG +
Preference number: 4 (lower is better)
Translates to: GASLCLPIKDGPLRHQGISSHKR*ATAAPR
Trigger: CCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGA...TATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAGTGATGCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTCAGCACTCAGTGAGGTATTaGCAGCTGTTAGCAAGACAG +
Preference number: 4 (lower is better)
Translates to: GKKIPRQRYVKPTEPWAQHSVRY*QLLARQ
Trigger: CTGTCTTGCTAACAGCTGCCAATACCTCACTGAGTG...CTGAGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp CTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACTTGGAGCCCATGTTaGTGTGAGGCACTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: LSSHKRWATAAPRHRGRATWSPC*CEALSE
Trigger: CTCACTGAGTGCCTCACACCAACATGGGCTCCAAGT...AGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276373.10
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp CACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACAGCAGCGGGCGAAGGAAACTCACTTaGAGCCCATGTTGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: HPLQNPSQLKFNQPHSSGRRKLT*SPCWCE
Trigger: CTCACACCAACATGGGCTCCAAGTGAGTTTCCTTCG...CCCGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276373.10
ENST00000517776.5
CDS-3UTR CCA 90 bp ATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTGGGTGTGGGCTCCAGGATaGCCACCCCCATGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: MPEKIRQQIKEACQSPHWVWAPG*PPPCWQ
Trigger: TTGCCAACATGGGGGTGGCCATCCTGGAGCCCACAC...CCAGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GAACACGTTGAGGAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGTGTGGGCTCCAGGATaGCCACCCCCATGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: EHVEEKRVTLFRSVGTMPVWAPG*PPPCWQ
Trigger: TTGCCAACATGGGGGTGGCCATCCTGGAGCCCACAC...TGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTCCTCAACGTGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCGTGTGGGCTCCAGGATaGCCACCCCCATGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: GTMPEKIRQQIKEACQSPVWAPG*PPPCWQ
Trigger: TTGCCAACATGGGGGTGGCCATCCTGGAGCCCACAC...GGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp GCAATGAGTCACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACTTAGGGAAGGTCCTGTaGCAGCTACAGGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: AMSHPLQNPSQLKFNQPHLGKVL*QLQVSC
Trigger: GCAGGAGACCTGTAGCTGTCACAGGACCTTCCCTAA...GTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp ATGTCACATTACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGTGGTCCGGAGCATGGTaGTGGCCGGACTGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: MSHYTPPVRKSTIRRDFKWSGAW*WPDWGS
Trigger: ACTGCCCCAGTCCGGCCATCACCATGCTCCGGACCA...CTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTAATGTGACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp CTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCCACGGTGTTGTTGTTaGAGAAGGAGAAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: LCLPIKDGPLRHQGIEEEPRCCC*RRRRWW
Trigger: CCACCATCTTCTCCTTCTTCAACAACAACACCGTGG...CTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp AGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGCCCACGAATGGGTTaGCCAGAAGTTGCATCACAG +
Preference number: 4 (lower is better)
Translates to: RATSYTGEKSIRDSVHGRGPRMG*PEVASQ
Trigger: CTGTGATGCAACTTCTGGTCAACCCATTCGTGGGCC...CCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp ATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGAACCCGTCACAGATCCAATCCTGTTGGTaGGAGGGCCCACGAATGGGT +
Preference number: 4 (lower is better)
Translates to: ITHYHLYAMSHPLQNPSQIQSCW*EGPRMG
Trigger: ACCCATTCGTGGGCCCTCTCACCAACAGGATTGGAT...CTGTGACGGGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp CTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGGAAGATCCAATGCCTTaGAGGGTTCGGGCCACAAAG +
Preference number: 4 (lower is better)
Translates to: LQVTQVRRVSGTVSMGGEEDPMP*RVRATK
Trigger: CTTTGTGGCCCGAACCCTTCAAGGCATTGGATCTTC...CTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp AGGGGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGCTGCATTGGGGCCAATaGGACCAAAAATATTGTGAG +
Preference number: 4 (lower is better)
Translates to: RGGKKIPRQRYVKPTEPWLHWGQ*DQKYCE
Trigger: CTCACAATATTTTTGGTCTCATTGGCCCCAATGCAG...CCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCCCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp GGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTCAGTACAAGTTACACAGGTaGGAAGAGTATCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: GKKIPRQRYVKPTEPWAQYKLHR*EEYQGQ
Trigger: CTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTA...CTGAGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp CAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGGAAACCACCTCTATGCAATaGGTCACCCCTTGCAGAACC +
Preference number: 4 (lower is better)
Translates to: QVTQVRRVSGTVSMGGEETTSMQ*VTPCRT
Trigger: GGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGT...TTCCTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp GACCATGAGCCAGGGAAAACCGATGGCCTTTACAATGGCACCACCGGTGGATGGGCAGCAAGACAATGCTaGGAACATTTTCTCAACTCG +
Preference number: 4 (lower is better)
Translates to: DHEPGKTDGLYNGTTGGWAARQC*EHFLNS
Trigger: CGAGTTGAGAAAATGTTCTCAGCATTGTCTTGCTGC...CCATCCACCGGTGGTGCCATTGTAAAGGCCATCGGTTTTCCCTGGCTCATGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS-3UTR TCA 90 bp CCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTTCCATGGGGCAGTCCTaGCTCAGAATAGCCTATAGC +
Preference number: 4 (lower is better)
Translates to: PIKDGPLRHQGIEEELQVSMGQS*LRIAYS
Trigger: GCTATAGGCTATTCTGAGTCAGGACTGCCCCATGGA...AACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437980.3
CDS-3UTR GCA 90 bp ATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGAACCCGTCACAGAGAGGGGAGGGAGTCTaGCCAGACGAAGGAAACTCA +
Preference number: 4 (lower is better)
Translates to: ITHYHLYAMSHPLQNPSQRGEGV*PDEGNS
Trigger: TGAGTTTCCTTCGTCTGGGCAGACTCCCTCCCCTCT...CTGTGACGGGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp AGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGAGAGGGGAGGGAGTCTaGCCAGACGAAGGAAACTCA +
Preference number: 4 (lower is better)
Translates to: RATSYTGEKSIRDSVHGRRGEGV*PDEGNS
Trigger: TGAGTTTCCTTCGTCTGGGCAGACTCCCTCCCCTCT...CCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp CCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTCAGCTACAGGTCTCCTaGAGCCTTTATGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: PIKDGPLRHQGIEEELQVQLQVS*SLYGRG
Trigger: CCCTCTTCCATAAAGGCTGCAGGAGACCTGTAGCTG...AACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp GCAATGAGTCACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACCTGGAGGTGGGATGGTaGTGGCAGTGTCATTCATCC +
Preference number: 4 (lower is better)
Translates to: AMSHPLQNPSQLKFNQPHLEVGW*WQCHSS
Trigger: GGATGAATGACACTGCCAGCACCATCCCACCTCCAG...GTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp CACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGAACCCGTCACTGGAGGTGGGATGGTaGTGGCAGTGTCATTCATCC +
Preference number: 4 (lower is better)
Translates to: HITHYHLYAMSHPLQNPSLEVGW*WQCHSS
Trigger: GGATGAATGACACTGCCAGCACCATCCCACCTCCAG...TGACGGGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp CTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCAGGATGAGGAAGGGTaGAGACTTCCCAACAAACTC +
Preference number: 4 (lower is better)
Translates to: LCLPIKDGPLRHQGIEEEQDEEG*RLPNKL
Trigger: GAGTTTGTTGGGAAGTCTGCACCCTTCCTCATCCTG...CTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp ACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGAACCCGTCACAGCTCCAGGATGAGGAAGGGTaGAGACTTCCCAACAAACTC +
Preference number: 4 (lower is better)
Translates to: THYHLYAMSHPLQNPSQLQDEEG*RLPNKL
Trigger: GAGTTTGTTGGGAAGTCTGCACCCTTCCTCATCCTG...GAGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp CTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTCAGGATGAGGAAGGGTaGAGACTTCCCAACAAACTC +
Preference number: 4 (lower is better)
Translates to: LSSHKRWATAAPRHRGRAQDEEG*RLPNKL
Trigger: GAGTTTGTTGGGAAGTCTGCACCCTTCCTCATCCTG...AGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp GCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGAGCACCTTCTGCTaGTACTCCTCATGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: AAPRHRGRATSYTGEKSIRSTFC*YSSWSG
Trigger: GCCTGACCATGAGGAGTAGCAGCAGAAGGTGCTCCT...GATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp AGCCAGGGAAAACCGATGGCCTTTACAATGGCACCACCGGTGGATGGACCTATATCAAGGAGCACCTTCTaGTGCTACTCCTCATGGTCA +
Preference number: 4 (lower is better)
Translates to: SQGKPMAFTMAPPVDGPISRSTF*CYSSWS
Trigger: TGACCATGAGGAGTAGCAGCAGAAGGTGCTCCTTGA...TATAGGTCCATCCACCGGTGGTGCCATTGTAAAGGCCATCGGTTTTCCCTGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS-3UTR GCA 90 bp GGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTGATCTGTTGGGACTATaGCAGAGAAAATCAGGCAAC +
Preference number: 4 (lower is better)
Translates to: GGKKIPRQRYVKPTEPWADLLGL*QRKSGN
Trigger: GTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATC...AGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GCAATGAGTCACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACTCCTTCAGCAACCGCTaGGGAGCATCCAGAATGGTC +
Preference number: 4 (lower is better)
Translates to: AMSHPLQNPSQLKFNQPHSFSNR*GASRMV
Trigger: GACCATTCTGGATGCTCCCCAGCGGTTGCTGAAGGA...GTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp ACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGAACCCGTCACAGCTCGAAGGTGGGCACAATTaGCACCACCACAGTAAACAG +
Preference number: 4 (lower is better)
Translates to: THYHLYAMSHPLQNPSQLEGGHN*HHHSKQ
Trigger: CTGTTTACTGTGGTGGTGCCAATTGTGCCCACCTTC...GAGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTGAAGGTGGGCACAATTaGCACCACCACAGTAAACAG +
Preference number: 4 (lower is better)
Translates to: LSSHKRWATAAPRHRGRAEGGHN*HHHSKQ
Trigger: CTGTTTACTGTGGTGGTGCCAATTGTGCCCACCTTC...AGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GTCACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACAGCAGCGGAAGGTGGGCACAATTaGCACCACCACAGTAAACAG +
Preference number: 4 (lower is better)
Translates to: VTPCRTRHSSSLINLTAAEGGHN*HHHSKQ
Trigger: CTGTTTACTGTGGTGGTGCCAATTGTGCCCACCTTC...CGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTGAGGTGGGATGGTGCTaGCAGTGTCATTCATCCATG +
Preference number: 4 (lower is better)
Translates to: PIKDGPLRHQGIEEELQVEVGWC*QCHSSM
Trigger: CATGGATGAATGACACTGCCAGCACCATCCCACCTC...AACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGATTCAGTGGCTGGAGGTaGGATGGTGCTGGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: EELQVTQVRRVSGTVSMGFSGWR*DGAGSV
Trigger: GACACTGCCAGCACCATCCCACCTCCAGCCACTGAA...TCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp CTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTGATGGCTTCAGTGGCTaGAGGTGGGATGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: LCQRKSGNRLKRLVSHPTDGFSG*RWDGAG
Trigger: GCCAGCACCATCCCACCTCCAGCCACTGAAGCCATC...AGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGGAGAGGGCCCACGAATaGGTTGACCAGAAGTTGCAT +
Preference number: 4 (lower is better)
Translates to: LQVTQVRRVSGTVSMGGEERAHE*VDQKLH
Trigger: ATGCAACTTCTGGTCAACCCATTCGTGGGCCCTCTC...CTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp AAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAAGAGGGGAGTCCCCTTaGCACTCTCAGGAGAGACTT +
Preference number: 4 (lower is better)
Translates to: KRWATAAPRHRGRATSYTRGESP*HSQERL
Trigger: AAGTCTCTCCTGAGAGTGCCAAGGGGACTCCCCTCT...TGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GCAATGAGTCACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACAGAGGGGAGTCCCCTTaGCACTCTCAGGAGAGACTT +
Preference number: 4 (lower is better)
Translates to: AMSHPLQNPSQLKFNQPHRGESP*HSQERL
Trigger: AAGTCTCTCCTGAGAGTGCCAAGGGGACTCCCCTCT...GTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp AGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAACACAGAGCAAGCTaGTACCTACTACCAGCATCC +
Preference number: 4 (lower is better)
Translates to: RWATAAPRHRGRATSYTGEHRAS*YLLPAS
Trigger: GGATGCTGGTAGTAGGTACCAGCTTGCTCTGTGTTC...ACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000519026.5
CDS-3UTR CCA 90 bp CCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTAATCCACCATGCCTATaGCAAGGCCAAGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: PIKDGPLRHQGIEEELQVNPPCL*QGQALH
Trigger: ATGCAGGGCTTGGCCTTGCCATAGGCATGGTGGATT...AACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GAACACGTTGAGGAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCACCATACACCGAGGTGTaGCGTAGATCCACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: EHVEEKRVTLFRSVGTMPPYTEV*RRSTRC
Trigger: GCACCTGGTGGATCTACGCCACACCTCGGTGTATGG...TGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTCCTCAACGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGACCATACACCGAGGTGTaGCGTAGATCCACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: EELQVTQVRRVSGTVSMGPYTEV*RRSTRC
Trigger: GCACCTGGTGGATCTACGCCACACCTCGGTGTATGG...TCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp ATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTGGCCATACACCGAGGTGTaGCGTAGATCCACCAGGTGC +
Preference number: 4 (lower is better)
Translates to: MPEKIRQQIKEACQSPHWPYTEV*RRSTRC
Trigger: GCACCTGGTGGATCTACGCCACACCTCGGTGTATGG...CCAGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp AGGGGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGCAGGTAGTAGCAGAGTaGAGCATAGACGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: RGGKKIPRQRYVKPTEPWQVVAE*SIDDVD
Trigger: ATCAACATCGTCTATGCTCCACTCTGCTACTACCTG...CCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCACATCCGGGTCTCCATaGGGCAGTCCTGACTCAGAA +
Preference number: 4 (lower is better)
Translates to: AAPRHRGRATSYTGEKSITSGSP*GSPDSE
Trigger: TTCTGAGTCAGGACTGCCCCATGGAGACCCGGATGT...GATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp AAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAACATCCGGGTCTCCATaGGGCAGTCCTGACTCAGAA +
Preference number: 4 (lower is better)
Translates to: KRWATAAPRHRGRATSYTTSGSP*GSPDSE
Trigger: TTCTGAGTCAGGACTGCCCCATGGAGACCCGGATGT...TGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GCAATGAGTCACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACTCCTTCGTGGGCTTCTaGGTTGCATACATCCGGGTC +
Preference number: 4 (lower is better)
Translates to: AMSHPLQNPSQLKFNQPHSFVGF*VAYIRV
Trigger: GACCCGGATGTATGCAACCCAGAAGCCCACGAAGGA...GTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCTCCTTCGTGGGCTTCTaGGTTGCATACATCCGGGTC +
Preference number: 4 (lower is better)
Translates to: AAPRHRGRATSYTGEKSISFVGF*VAYIRV
Trigger: GACCCGGATGTATGCAACCCAGAAGCCCACGAAGGA...GATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp AGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGTCCTTCGTGGGCTTCTaGGTTGCATACATCCGGGTC +
Preference number: 4 (lower is better)
Translates to: RATSYTGEKSIRDSVHGRSFVGF*VAYIRV
Trigger: GACCCGGATGTATGCAACCCAGAAGCCCACGAAGGA...CCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp AAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACATCCTTCGTGGGCTTCTaGGTTGCATACATCCGGGTC +
Preference number: 4 (lower is better)
Translates to: KRWATAAPRHRGRATSYTSFVGF*VAYIRV
Trigger: GACCCGGATGTATGCAACCCAGAAGCCCACGAAGGA...TGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp CTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGTGCTGCTACTCCTCATaGTCAGGCTCCTCATCACTG +
Preference number: 4 (lower is better)
Translates to: LQVTQVRRVSGTVSMGGECCYSS*SGSSSL
Trigger: CAGTGATGAGGAGCCTGACCATGAGGAGTAGCAGCA...CTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp CTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGTGTCAGTCACCCCACTaGTTTCAGGGGCACATTACT +
Preference number: 4 (lower is better)
Translates to: LCLPIKDGPLRHQGIEEECQSPH*FQGHIT
Trigger: AGTAATGTGCCCCTGAAACCAGTGGGGTGACTGACA...CTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GTCACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACAGCAGCGTGTCAGTCACCCCACTaGTTTCAGGGGCACATTACT +
Preference number: 4 (lower is better)
Translates to: VTPCRTRHSSSLINLTAACQSPH*FQGHIT
Trigger: AGTAATGTGCCCCTGAAACCAGTGGGGTGACTGACA...CGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGCTTCAAGCTGGCATTTaGCAGCAAGACAATGCTGAG +
Preference number: 4 (lower is better)
Translates to: DGPLRHQGIEEELQVTQVLQAGI*QQDNAE
Trigger: CTCAGCATTGTCTTGCTGCCAAATGCCAGCTTGAAG...CACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACTTGGAGCCCATGTTaGTGTGAGGCACTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: PIKDGPLRHQGIEEELQVTWSPC*CEALSE
Trigger: CTCACTGAGTGCCTCACACCAACATGGGCTCCAAGT...AACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276373.10
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp CACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACAGCAGCGGGAGTGTCAAACTGGGATaGAATCCCACGCTTTTCAAC +
Preference number: 4 (lower is better)
Translates to: HPLQNPSQLKFNQPHSSGSVKLG*NPTLFN
Trigger: GTTGAAAAGCGTGGGATTTCATCCCAGTTTGACACT...CCCGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS-3UTR TCA 90 bp CTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGCCACGGTGTTGTTGTTaGAGAAGGAGAAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: LQVTQVRRVSGTVSMGGEPRCCC*RRRRWW
Trigger: CCACCATCTTCTCCTTCTTCAACAACAACACCGTGG...CTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp CTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTGTTGTTTTTATGAGCTaGGATGGCTTCAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LSSHKRWATAAPRHRGRAVVFMS*DGFSGW
Trigger: CCAGCCACTGAAGCCATCTCAGCTCATAAAAACAAC...AGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp GATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGGCAAACATGGGGATATaGTATCCAATCCTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: DGPLRHQGIEEELQVTQVANMGI*YPILLV
Trigger: CACCAACAGGATTGGATATCATATCCCCATGTTTGC...CACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp TGGTTTCAGGGGCACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGGAAGATCCAATGCCTTaGAGGGTTCGGGCCACAAAG +
Preference number: 4 (lower is better)
Translates to: WFQGHITHYHLYAMSHPLEDPMP*RVRATK
Trigger: CTTTGTGGCCCGAACCCTTCAAGGCATTGGATCTTC...CAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp TGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTGGTAGAGGTTGGTGCCAATaGGGTAGGACACACTGGCAG +
Preference number: 4 (lower is better)
Translates to: CQRKSGNRLKRLVSHPTGRGWCQ*GRTHWQ
Trigger: CTGCCAGTGTGTCCTACCTCATTGGCACCAACCTCT...ACCAGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp GCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCTCCATGGGGCAGTCCTaGCTCAGAATAGCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: AAPRHRGRATSYTGEKSISMGQS*LRIASF
Trigger: GAAGCTTGCTATTCTGAGTCAGGACTGCCCCATGGA...GATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp CTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCCATGGGGCAGTCCTaGCTCAGAATAGCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: LRHQGIEEELQVTQVRRVSMGQS*LRIASF
Trigger: GAAGCTTGCTATTCTGAGTCAGGACTGCCCCATGGA...TACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp GTCACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACAGCAGCGGTCACTGAGGCATCATaGATTCAAGGAGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: VTPCRTRHSSSLINLTAAVTEAS*IQGAPS
Trigger: AGAAGGTGCTCCTTGAATTCATGATGCCTCAGTGAC...CGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp TCACAGCTCAAGTTTAATCAACCTCACAGCAGCGGGAAGGTGCATCACTCTGTCAGGGACACTGTTCTCTaGACGTGGATGTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SQLKFNQPHSSGKVHHSVRDTVL*TWMCCW
Trigger: CCAACAGCACATCCACGTTCAGAGAACAGTGTCCCT...GACAGAGTGATGCACCTTCCCGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437980.3
ENST00000440926.3
CDS-3UTR TCA 90 bp CACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGAACCCGTCAAGGGACACTGTTCTCTaGACGTGGATGTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: HITHYHLYAMSHPLQNPSRDTVL*TWMCCW
Trigger: CCAACAGCACATCCACGTTCAGAGAACAGTGTCCCT...TGACGGGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437980.3
ENST00000440926.3
CDS-3UTR TCA 90 bp CTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTAAGGGACACTGTTCTCTaGACGTGGATGTGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: LRHQGIEEELQVTQVRRVRDTVL*TWMCCW
Trigger: CCAACAGCACATCCACGTTCAGAGAACAGTGTCCCT...TACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000437980.3
ENST00000440926.3
ENST00000519026.5
CDS-3UTR GCA 90 bp GAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGACTGGAGGTGGGATGGTaGTGGCAGTGTCATTCATCC +
Preference number: 4 (lower is better)
Translates to: EELQVTQVRRVSGTVSMGLEVGW*WQCHSS
Trigger: GGATGAATGACACTGCCAGCACCATCCCACCTCCAG...TCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp CTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGGCAAGGCCAAGCCCTaGATTGGGGCCAATGAGACC +
Preference number: 4 (lower is better)
Translates to: LFRSVGTMPEKIRQQIKEGKAKP*IGANET
Trigger: GGTCTCATTGGCCCCAATGCAGGGCTTGGCCTTGCC...CTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp TCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGGCAAGGCCAAGCCCTaGATTGGGGCCAATGAGACC +
Preference number: 4 (lower is better)
Translates to: SDLLGLCQRKSGNRLKRLGKAKP*IGANET
Trigger: GGTCTCATTGGCCCCAATGCAGGGCTTGGCCTTGCC...AAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp GAACACGTTGAGGAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAAGGAGCACCTTCTGCTaGTACTCCTCATGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: EHVEEKRVTLFRSVGTMPRSTFC*YSSWSG
Trigger: GCCTGACCATGAGGAGTAGCAGCAGAAGGTGCTCCT...TGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTCCTCAACGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp AGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGACAGCAGCGGGAAGGTaGATCACTCTGTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: RATSYTGEKSIRDSVHGRTAAGR*ITLSSH
Trigger: ATGGGAAGACAGAGTGATGCACCTTCCCGCTGCTGT...CCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp CACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGAACCCGTCATCTTGGAGCCCATGTTaGTGTGAGGCACTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: HITHYHLYAMSHPLQNPSSWSPC*CEALSE
Trigger: CTCACTGAGTGCCTCACACCAACATGGGCTCCAAGA...TGACGGGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS-3UTR CCA 90 bp GGAAAACCCGGGAAAGAACACGTTGAGGAAAAGAGGGTAACACTCTTCCGATCTTCCTTCAGCAACCGCTaGGGAGCATCCAGAATGGTC +
Preference number: 4 (lower is better)
Translates to: GKPGKEHVEEKRVTLFRSSFSNR*GASRMV
Trigger: GACCATTCTGGATGCTCCCCAGCGGTTGCTGAAGGA...AGATCGGAAGAGTGTTACCCTCTTTTCCTCAACGTGTTCTTTCCCGGGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp TTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACGGGGAACTTCCGGCATaGCCGAGGTGCAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LGLCQRKSGNRLKRLVSHGELPA*PRCREE
Trigger: CTCTTCTCTGCACCTCGGCCATGCCGGAAGTTCCCC...GTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp TACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGGCAGTTTCTGGGGAACTTCCGGCATaGCCGAGGTGCAGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: YTPPVRKSTIRRDFKAVSGELPA*PRCREE
Trigger: CTCTTCTCTGCACCTCGGCCATGCCGGAAGTTCCCC...AGAAACTGCCTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GCAATGAGTCACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACGAGGTGGGATGGTGCTaGCAGTGTCATTCATCCATG +
Preference number: 4 (lower is better)
Translates to: AMSHPLQNPSQLKFNQPHEVGWC*QCHSSM
Trigger: CATGGATGAATGACACTGCCAGCACCATCCCACCTC...GTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp AGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGAGGTGGGATGGTGCTaGCAGTGTCATTCATCCATG +
Preference number: 4 (lower is better)
Translates to: RATSYTGEKSIRDSVHGREVGWC*QCHSSM
Trigger: CATGGATGAATGACACTGCCAGCACCATCCCACCTC...CCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GAACACGTTGAGGAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCATGGCTGGAGGTGGGATaGTGCTGGCAGTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: EHVEEKRVTLFRSVGTMPWLEVG*CWQCHS
Trigger: TGAATGACACTGCCAGCACCATCCCACCTCCAGCCA...TGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTCCTCAACGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp ATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCTTCAGTGGCTGGAGGTaGGATGGTGCTGGCAGTGTC +
Preference number: 4 (lower is better)
Translates to: IEEELQVTQVRRVSGTVSFSGWR*DGAGSV
Trigger: GACACTGCCAGCACCATCCCACCTCCAGCCACTGAA...GGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp TACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGGCAGTTTCTGATGGCTTCAGTGGCTaGAGGTGGGATGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: YTPPVRKSTIRRDFKAVSDGFSG*RWDGAG
Trigger: GCCAGCACCATCCCACCTCCAGCCACTGAAGCCATC...AGAAACTGCCTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp TCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGATGGCTTCAGTGGCTaGAGGTGGGATGGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: SDLLGLCQRKSGNRLKRLDGFSG*RWDGAG
Trigger: GCCAGCACCATCCCACCTCCAGCCACTGAAGCCATC...AAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GGAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGCTGAGATGGCTTCAGTaGCTGGAGGTGGGATGGTGC +
Preference number: 4 (lower is better)
Translates to: GKEGNTLPICWDYARENQLRWLQ*LEVGWC
Trigger: GCACCATCCCACCTCCAGCCACTGAAGCCATCTCAG...CTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp ATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGAACCCGTCACAGGAGAGGGCCCACGAATaGGTTGACCAGAAGTTGCAT +
Preference number: 4 (lower is better)
Translates to: ITHYHLYAMSHPLQNPSQERAHE*VDQKLH
Trigger: ATGCAACTTCTGGTCAACCCATTCGTGGGCCCTCTC...CTGTGACGGGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACAGCAGCGGGTCTCAGGAGAGACTTTaGAAGGCTGTAGGATGCAAA +
Preference number: 4 (lower is better)
Translates to: HPLQNPSQLKFNQPHSSGSQERL*KAVGCK
Trigger: TTTGCATCCTACAGCCTTCCAAAGTCTCTCCTGAGA...CCCGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp ATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACAAGAGGGGAGTCCCCTTaGCACTCTCAGGAGAGACTT +
Preference number: 4 (lower is better)
Translates to: IKDGPLRHQGIEEELQVTRGESP*HSQERL
Trigger: AAGTCTCTCCTGAGAGTGCCAAGGGGACTCCCCTCT...TGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp TGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTGGTAGAGGGGAGTCCCCTTaGCACTCTCAGGAGAGACTT +
Preference number: 4 (lower is better)
Translates to: CQRKSGNRLKRLVSHPTGRGESP*HSQERL
Trigger: AAGTCTCTCCTGAGAGTGCCAAGGGGACTCCCCTCT...ACCAGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGGAAACCGACCCATCTTGTTaGCCAACACACCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: QVTQVRRVSGTVSMGGEETDPSC*PTHQRG
Trigger: ACCTCTTTGGTGTGTTGGCCAACAAGATGGGTCGGT...TTCCTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GAATTCAAGGAGCACCTTCTGCTGCTACTCCTCATGGTCAGGCTCCTCATCACTACCGACCCATCTTGTTaGCCAACACACCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: EFKEHLLLLLLMVRLLITTDPSC*PTHQRG
Trigger: ACCTCTTTGGTGTGTTGGCCAACAAGATGGGTCGGT...AGTGATGAGGAGCCTGACCATGAGGAGTAGCAGCAGAAGGTGCTCCTTGAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS-3UTR CCA 90 bp AAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAAATCCACCATGCCTATaGCAAGGCCAAGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: KRWATAAPRHRGRATSYTNPPCL*QGQALH
Trigger: ATGCAGGGCTTGGCCTTGCCATAGGCATGGTGGATT...TGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp TGGTTTCAGGGGCACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGAATCCACCATGCCTATaGCAAGGCCAAGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: WFQGHITHYHLYAMSHPLNPPCL*QGQALH
Trigger: ATGCAGGGCTTGGCCTTGCCATAGGCATGGTGGATT...CAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp ATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGAACCCGTCACAGGCCAGGGAAAACCGATaGCCTTTACAATGGCACCAC +
Preference number: 4 (lower is better)
Translates to: ITHYHLYAMSHPLQNPSQARENR*PLQWHH
Trigger: GTGGTGCCATTGTAAAGGCCATCGGTTTTCCCTGGC...CTGTGACGGGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCACATCCGGGTCTCCATaGGGCAGTCCTGACTCAGAA +
Preference number: 4 (lower is better)
Translates to: GTMPEKIRQQIKEACQSPTSGSP*GSPDSE
Trigger: TTCTGAGTCAGGACTGCCCCATGGAGACCCGGATGT...GGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp TCAAGTTTAATCAACCTCACAGCAGCGGGAAGGTGCATCACTCTGTCTTCCCATTCCTTCGTGGGCTTCTaGGTTGCATACATCCGGGTC +
Preference number: 4 (lower is better)
Translates to: SSLINLTAAGRCITLSSHSFVGF*VAYIRV
Trigger: GACCCGGATGTATGCAACCCAGAAGCCCACGAAGGA...ATGGGAAGACAGAGTGATGCACCTTCCCGCTGCTGTGAGGTTGATTAAACTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GGTGCATCACTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAATTCCTTCGTaGGCTTCTGGGTTGCATACA +
Preference number: 4 (lower is better)
Translates to: GASLCLPIKDGPLRHQGIEEIPS*ASGLHT
Trigger: TGTATGCAACCCAGAAGCCCACGAAGGAATTTCCTC...TATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAGTGATGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp TGGTTTCAGGGGCACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGGGACAGTGTCCATaGGAGGGGAGGAAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: WFQGHITHYHLYAMSHPLQGQCP*EGRKED
Trigger: ATCTTCTTTCCTCCCCTCCCATGGACACTGTCCCTG...CAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGTGTCAGTCACCCCACTaGTTTCAGGGGCACATTACT +
Preference number: 4 (lower is better)
Translates to: LQVTQVRRVSGTVSMGGECQSPH*FQGHIT
Trigger: AGTAATGTGCCCCTGAAACCAGTGGGGTGACTGACA...CTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CGTCACAGCTCAAGTTTAATCAACCTCACAGCAGCGGGAAGGTGCATCACTCTGTGTCAGTCACCCCACTaGTTTCAGGGGCACATTACT +
Preference number: 4 (lower is better)
Translates to: RHSSSLINLTAAGRCITLCQSPH*FQGHIT
Trigger: AGTAATGTGCCCCTGAAACCAGTGGGGTGACTGACA...CAGAGTGATGCACCTTCCCGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTACTCTTCCGATCTGTTaGGACTATGCCAGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: GGKKIPRQRYVKPTEPWATLPIC*DYAREN
Trigger: ATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGT...AGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp AGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTCTTCAAGCTGGCATTTaGCAGCAAGACAATGCTGAG +
Preference number: 4 (lower is better)
Translates to: RWATAAPRHRGRATSYTGLQAGI*QQDNAE
Trigger: CTCAGCATTGTCTTGCTGCCAAATGCCAGCTTGAAG...ACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTCAGCAAAACTCTTCAAGCTaGCATTTGGCAGCAAGACAA +
Preference number: 4 (lower is better)
Translates to: GKKIPRQRYVKPTEPWAQQNSSS*HLAARQ
Trigger: TTGTCTTGCTGCCAAATGCCAGCTTGAAGAGTTTTG...CTGAGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CGTCACAGCTCAAGTTTAATCAACCTCACAGCAGCGGGAAGGTGCATCACTCTGGTAGACAGAGCAAGCTaGTACCTACTACCAGCATCC +
Preference number: 4 (lower is better)
Translates to: RHSSSLINLTAAGRCITLVDRAS*YLLPAS
Trigger: GGATGCTGGTAGTAGGTACCAGCTTGCTCTGTCTAC...CAGAGTGATGCACCTTCCCGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS-3UTR TCA 90 bp CACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGAACCCGTCACCACGGTGTTGTTGTTaGAGAAGGAGAAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: HITHYHLYAMSHPLQNPSPRCCC*RRRRWW
Trigger: CCACCATCTTCTCCTTCTTCAACAACAACACCGTGG...TGACGGGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp CGTCACAGCTCAAGTTTAATCAACCTCACAGCAGCGGGAAGGTGCATCACTCTGGTTGTTTTTATGAGCTaGGATGGCTTCAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RHSSSLINLTAAGRCITLVVFMS*DGFSGW
Trigger: CCAGCCACTGAAGCCATCTCAGCTCATAAAAACAAC...CAGAGTGATGCACCTTCCCGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp CTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGGTTGTTTTTATGAGCTaGGATGGCTTCAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: LQVTQVRRVSGTVSMGGEVVFMS*DGFSGW
Trigger: CCAGCCACTGAAGCCATCTCAGCTCATAAAAACAAC...CTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp GATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAAGCAGTTGTTTTTATaGGCTGAGATGGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: DGPLRHQGIEEELQVTQVKQLFL*AEMASV
Trigger: CACTGAAGCCATCTCAGCTCATAAAAACAACTGCTT...CACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp AGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGTTGCATCACAGCCTTTaGAGCAAACAGAACCCCGAC +
Preference number: 4 (lower is better)
Translates to: RATSYTGEKSIRDSVHGRLHHSL*SKQNPD
Trigger: GTCGGGGTTCTGTTTGCTTCAAAGGCTGTGATGCAA...CCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp GAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGGGCCCACGAATGGGTTaGCCAGAAGTTGCATCACAG +
Preference number: 4 (lower is better)
Translates to: EKRVTLFRSVGTMPEKIRGPRMG*PEVASQ
Trigger: CTGTGATGCAACTTCTGGTCAACCCATTCGTGGGCC...CCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp CTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTATCCAATCCTGTTGGTaGGAGGGCCCACGAATGGGT +
Preference number: 4 (lower is better)
Translates to: LCQRKSGNRLKRLVSHPTIQSCW*EGPRMG
Trigger: ACCCATTCGTGGGCCCTCTCACCAACAGGATTGGAT...AGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp AGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATATCCAATCCTGTTGGTaGGAGGGCCCACGAATGGGT +
Preference number: 4 (lower is better)
Translates to: RGRATSYTGEKSIRDSVHIQSCW*EGPRMG
Trigger: ACCCATTCGTGGGCCCTCTCACCAACAGGATTGGAT...ATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp ATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACAGAAGATCCAATGCCTTaGAGGGTTCGGGCCACAAAG +
Preference number: 4 (lower is better)
Translates to: IKDGPLRHQGIEEELQVTEDPMP*RVRATK
Trigger: CTTTGTGGCCCGAACCCTTCAAGGCATTGGATCTTC...TGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp GTCACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACAGCAGCGCTGCATTGGGGCCAATaGGACCAAAAATATTGTGAG +
Preference number: 4 (lower is better)
Translates to: VTPCRTRHSSSLINLTAALHWGQ*DQKYCE
Trigger: CTCACAATATTTTTGGTCTCATTGGCCCCAATGCAG...CGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp ATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACATCCATGGGGCAGTCCTaGCTCAGAATAGCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: IKDGPLRHQGIEEELQVTSMGQS*LRIASF
Trigger: GAAGCTTGCTATTCTGAGTCAGGACTGCCCCATGGA...TGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp TTCACTGAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATCACCAGGCAGAGGTATGTaGAGCCCACTGAGCCGTGGG +
Preference number: 4 (lower is better)
Translates to: FTEGKALLAALDLATEKSPGRGM*SPLSRG
Trigger: CCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGG...TGATTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTCAGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp CTTGTCAGTCACCCCACTGGTTTCAGGGGCACATTACTCACTACCACCTCTATGCGGGAAAGAACACGTTaGGGAAAAGAGGGTAACACT +
Preference number: 4 (lower is better)
Translates to: LVSHPTGFRGTLLTTTSMRERTR*GKEGNT
Trigger: AGTGTTACCCTCTTTTCCTCAACGTGTTCTTTCCCG...CATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCAGTGGGGTGACTGACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp CATCATGAATTCAAGGAGCACCTTCTGCTGCTACTCCTCATGGTCAGGCTCCTCCGGGAAAGAACACGTTaGGGAAAAGAGGGTAACACT +
Preference number: 4 (lower is better)
Translates to: HHEFKEHLLLLLLMVRLLRERTR*GKEGNT
Trigger: AGTGTTACCCTCTTTTCCTCAACGTGTTCTTTCCCG...GAGGAGCCTGACCATGAGGAGTAGCAGCAGAAGGTGCTCCTTGAATTCATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437980.3
ENST00000517776.5
CDS-3UTR TCA 90 bp CTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTGCAGCAAGACAATGCTaGGAACATTTTCTCAACTCG +
Preference number: 4 (lower is better)
Translates to: LSSHKRWATAAPRHRGRAAARQC*EHFLNS
Trigger: CGAGTTGAGAAAATGTTCTCAGCATTGTCTTGCTGC...AGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp CTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGGCAGCAAGACAATGCTaGGAACATTTTCTCAACTCG +
Preference number: 4 (lower is better)
Translates to: LCLPIKDGPLRHQGIEEEAARQC*EHFLNS
Trigger: CGAGTTGAGAAAATGTTCTCAGCATTGTCTTGCTGC...CTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp GGAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGAGAGGGGAGGGAGTCTaGCCAGACGAAGGAAACTCA +
Preference number: 4 (lower is better)
Translates to: GKEGNTLPICWDYARENQRGEGV*PDEGNS
Trigger: TGAGTTTCCTTCGTCTGGGCAGACTCCCTCCCCTCT...CTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp CAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGGAAGGGTTGACCAGAAGTTaGATCACAGCCTTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: QVTQVRRVSGTVSMGGEEGLTRS*ITAFEA
Trigger: TGCTTCAAAGGCTGTGATGCAACTTCTGGTCAACCC...TTCCTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp TCAGGGGCACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGAATGGAAGGCTGTAGGATaGAAAGCTGGAGTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: SGAHYSLPPLCNESPLAEWKAVG*KAGVLH
Trigger: ATGGAGCACTCCAGCTTTGCATCCTACAGCCTTCCA...TTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTGCCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp TGGTTTCAGGGGCACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGTGGAAGGCTGTAGGATaGAAAGCTGGAGTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: WFQGHITHYHLYAMSHPLWKAVG*KAGVLH
Trigger: ATGGAGCACTCCAGCTTTGCATCCTACAGCCTTCCA...CAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp GGAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGCGTGGGCTTCTGGGTTaGATACATCCGGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: GKEGNTLPICWDYARENQRGLLG*IHPGLH
Trigger: ATGGAGACCCGGATGTATGCAACCCAGAAGCCCACG...CTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp AAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACGTGGGCTTCTGGGTTaGATACATCCGGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: KRVTLFRSVGTMPEKIRQRGLLG*IHPGLH
Trigger: ATGGAGACCCGGATGTATGCAACCCAGAAGCCCACG...TTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp AGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATAGGAGCACCTTCTGCTaGTACTCCTCATGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: RGRATSYTGEKSIRDSVHRSTFC*YSSWSG
Trigger: GCCTGACCATGAGGAGTAGCAGCAGAAGGTGCTCCT...ATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp GCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCTCAAGGAGCACCTTCTaGTGCTACTCCTCATGGTCA +
Preference number: 4 (lower is better)
Translates to: AAPRHRGRATSYTGEKSISRSTF*CYSSWS
Trigger: TGACCATGAGGAGTAGCAGCAGAAGGTGCTCCTTGA...GATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp CATCATGAATTCAAGGAGCACCTTCTGCTGCTACTCCTCATGGTCAGGCTCCTCTCACTACCACCTCTATaGAATGAGTCACCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: HHEFKEHLLLLLLMVRLLSLPPL*NESPLA
Trigger: TGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGA...GAGGAGCCTGACCATGAGGAGTAGCAGCAGAAGGTGCTCCTTGAATTCATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437980.3
ENST00000517776.5
CDS-3UTR GCA 90 bp AGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGATCTGTTGGGACTATaGCAGAGAAAATCAGGCAAC +
Preference number: 4 (lower is better)
Translates to: RWATAAPRHRGRATSYTGDLLGL*QRKSGN
Trigger: GTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATC...ACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp TCAAGTTTAATCAACCTCACAGCAGCGGGAAGGTGCATCACTCTGTCTTCCCATAAAGCAGATGGACCCTaGAGCCACCAGGATGTAAGG +
Preference number: 4 (lower is better)
Translates to: SSLINLTAAGRCITLSSHKADGP*SHQDVR
Trigger: CCTTACATCCTGGTGGCTGCAGGGTCCATCTGCTTT...ATGGGAAGACAGAGTGATGCACCTTCCCGCTGCTGTGAGGTTGATTAAACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCTCCTGCAGCCTTTATaGAAGAGGGGAGGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: EKRVTLFRSVGTMPEKIRLLQPL*KRGGSL
Trigger: CAGACTCCCTCCCCTCTTCCATAAAGGCTGCAGGAG...CCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTAGAAGGTGGGCACAATTaGCACCACCACAGTAAACAG +
Preference number: 4 (lower is better)
Translates to: LRHQGIEEELQVTQVRRVEGGHN*HHHSKQ
Trigger: CTGTTTACTGTGGTGGTGCCAATTGTGCCCACCTTC...TACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp AGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGAAGGTGGGCACAATTaGCACCACCACAGTAAACAG +
Preference number: 4 (lower is better)
Translates to: RATSYTGEKSIRDSVHGREGGHN*HHHSKQ
Trigger: CTGTTTACTGTGGTGGTGCCAATTGTGCCCACCTTC...CCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GGCCTTTACAATGGCACCACCGGTGGATGGACCTATAGCAAAGCCCATGCAAAATGTCATATAGGAAGGTaGGCACAATTGGCACCACCA +
Preference number: 4 (lower is better)
Translates to: GLYNGTTGGWTYSKAHAKCHIGR*AQLAPP
Trigger: TGGTGGTGCCAATTGTGCCCACCTTCCTATATGACA...TTTTGCATGGGCTTTGCTATAGGTCCATCCACCGGTGGTGCCATTGTAAAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS-3UTR CCA 90 bp CAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGGAATGTCATATAGGAAGGTaGGCACAATTGGCACCACCA +
Preference number: 4 (lower is better)
Translates to: QVTQVRRVSGTVSMGGEECHIGR*AQLAPP
Trigger: TGGTGGTGCCAATTGTGCCCACCTTCCTATATGACA...TTCCTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp ATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACAGAGAGGGCCCACGAATaGGTTGACCAGAAGTTGCAT +
Preference number: 4 (lower is better)
Translates to: IKDGPLRHQGIEEELQVTERAHE*VDQKLH
Trigger: ATGCAACTTCTGGTCAACCCATTCGTGGGCCCTCTC...TGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp CACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACAGCAGCGGGCAAAGCCAGCAAACATaGGGATATGATATCCAATCC +
Preference number: 4 (lower is better)
Translates to: HPLQNPSQLKFNQPHSSGQSQQT*GYDIQS
Trigger: GGATTGGATATCATATCCCCATGTTTGCTGGCTTTG...CCCGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp AGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGCATCAGTGTAGACACTaGCCAGCATTCCAAGACCTG +
Preference number: 4 (lower is better)
Translates to: RATSYTGEKSIRDSVHGRHQCRH*PAFQDL
Trigger: CAGGTCTTGGAATGCTGGCCAGTGTCTACACTGATG...CCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCGAACACAGAGCAAGCTaGTACCTACTACCAGCATCC +
Preference number: 4 (lower is better)
Translates to: AAPRHRGRATSYTGEKSIEHRAS*YLLPAS
Trigger: GGATGCTGGTAGTAGGTACCAGCTTGCTCTGTGTTC...GATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000519026.5
CDS-3UTR CCA 90 bp GAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAAATCCACCATGCCTATaGCAAGGCCAAGCCCTGCAT +
Preference number: 4 (lower is better)
Translates to: EELQVTQVRRVSGTVSMGNPPCL*QGQALH
Trigger: ATGCAGGGCTTGGCCTTGCCATAGGCATGGTGGATT...TCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp CTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCAGGTAGTAGCAGAGTaGAGCATAGACGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: LCLPIKDGPLRHQGIEEEQVVAE*SIDDVD
Trigger: ATCAACATCGTCTATGCTCCACTCTGCTACTACCTG...CTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp CTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTACATCCGGGTCTCCATaGGGCAGTCCTGACTCAGAA +
Preference number: 4 (lower is better)
Translates to: LCQRKSGNRLKRLVSHPTTSGSP*GSPDSE
Trigger: TTCTGAGTCAGGACTGCCCCATGGAGACCCGGATGT...AGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GAACACGTTGAGGAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCATGCTGCTACTCCTCATaGTCAGGCTCCTCATCACTG +
Preference number: 4 (lower is better)
Translates to: EHVEEKRVTLFRSVGTMPCCYSS*SGSSSL
Trigger: CAGTGATGAGGAGCCTGACCATGAGGAGTAGCAGCA...TGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTCCTCAACGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp TGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTGGTTGCTGCTACTCCTCATaGTCAGGCTCCTCATCACTG +
Preference number: 4 (lower is better)
Translates to: CQRKSGNRLKRLVSHPTGCCYSS*SGSSSL
Trigger: CAGTGATGAGGAGCCTGACCATGAGGAGTAGCAGCA...ACCAGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGATGCTGCTACTCCTCATaGTCAGGCTCCTCATCACTG +
Preference number: 4 (lower is better)
Translates to: EELQVTQVRRVSGTVSMGCCYSS*SGSSSL
Trigger: CAGTGATGAGGAGCCTGACCATGAGGAGTAGCAGCA...TCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp ATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGAACCCGTCACAGTCCCAGGGAAAGAGGTaGTCACTGAGGCATCATGAA +
Preference number: 4 (lower is better)
Translates to: ITHYHLYAMSHPLQNPSQSQGKR*SLRHHE
Trigger: TTCATGATGCCTCAGTGACCACCTCTTTCCCTGGGA...CTGTGACGGGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp TCAAGTTTAATCAACCTCACAGCAGCGGGAAGGTGCATCACTCTGTCTTCCCATTCTTCCCATAAAAGATaGGCCACTGCGGCACCAAGG +
Preference number: 4 (lower is better)
Translates to: SSLINLTAAGRCITLSSHSSHKR*ATAAPR
Trigger: CCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGA...ATGGGAAGACAGAGTGATGCACCTTCCCGCTGCTGTGAGGTTGATTAAACTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CTTGTCAGTCACCCCACTGGTTTCAGGGGCACATTACTCACTACCACCTCTATGTTTTCTCAACTCGGCTaGGAAAACCCGGGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: LVSHPTGFRGTLLTTTSMFSQLG*ENPGKN
Trigger: GTTCTTTCCCGGGTTTTCCCAGCCGAGTTGAGAAAA...CATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCAGTGGGGTGACTGACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CTTGTCAGTCACCCCACTGGTTTCAGGGGCACATTACTCACTACCACCTCTATGCACTCAGTGAGGTATTaGCAGCTGTTAGCAAGACAG +
Preference number: 4 (lower is better)
Translates to: LVSHPTGFRGTLLTTTSMHSVRY*QLLARQ
Trigger: CTGTCTTGCTAACAGCTGCCAATACCTCACTGAGTG...CATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCAGTGGGGTGACTGACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp ACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGGCAGTTTCTTTTAGGGAAGGTCCTGTaGCAGCTACAGGTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TPLLLGNLQSGGISRQFLLGKVL*QLQVSC
Trigger: GCAGGAGACCTGTAGCTGTCACAGGACCTTCCCTAA...AAGAAACTGCCTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp TGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTGGTCCACGGTGTTGTTGTTaGAGAAGGAGAAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: CQRKSGNRLKRLVSHPTGPRCCC*RRRRWW
Trigger: CCACCATCTTCTCCTTCTTCAACAACAACACCGTGG...ACCAGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp AAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGTTGTTTTTATGAGCTaGGATGGCTTCAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: KRWATAAPRHRGRATSYTVVFMS*DGFSGW
Trigger: CCAGCCACTGAAGCCATCTCAGCTCATAAAAACAAC...TGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp GAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGATTGCATCACAGCCTTTaGAGCAAACAGAACCCCGAC +
Preference number: 4 (lower is better)
Translates to: EELQVTQVRRVSGTVSMGLHHSL*SKQNPD
Trigger: GTCGGGGTTCTGTTTGCTTCAAAGGCTGTGATGCAA...TCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp CAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGGAAGCAAACATGGGGATATaGTATCCAATCCTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: QVTQVRRVSGTVSMGGEEANMGI*YPILLV
Trigger: CACCAACAGGATTGGATATCATATCCCCATGTTTGC...TTCCTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp TCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTAGAGGTTGGTGCCAATaGGGTAGGACACACTGGCAG +
Preference number: 4 (lower is better)
Translates to: SDLLGLCQRKSGNRLKRLRGWCQ*GRTHWQ
Trigger: CTGCCAGTGTGTCCTACCTCATTGGCACCAACCTCT...AAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp CCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTCTGCATTGGGGCCAATaGGACCAAAAATATTGTGAG +
Preference number: 4 (lower is better)
Translates to: PIKDGPLRHQGIEEELQVLHWGQ*DQKYCE
Trigger: CTCACAATATTTTTGGTCTCATTGGCCCCAATGCAG...AACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp CGTCACAGCTCAAGTTTAATCAACCTCACAGCAGCGGGAAGGTGCATCACTCTGCTGCATTGGGGCCAATaGGACCAAAAATATTGTGAG +
Preference number: 4 (lower is better)
Translates to: RHSSSLINLTAAGRCITLLHWGQ*DQKYCE
Trigger: CTCACAATATTTTTGGTCTCATTGGCCCCAATGCAG...CAGAGTGATGCACCTTCCCGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp GCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCGTCACTGAGGCATCATaGATTCAAGGAGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: AAPRHRGRATSYTGEKSIVTEAS*IQGAPS
Trigger: AGAAGGTGCTCCTTGAATTCATGATGCCTCAGTGAC...GATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp CTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTACCACCTCTATGCAATaGGTCACCCCTTGCAGAACC +
Preference number: 4 (lower is better)
Translates to: LCQRKSGNRLKRLVSHPTTTSMQ*VTPCRT
Trigger: GGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGT...AGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp AGGGGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGTTTAACTTCTTCCCATaGAATCTTGGGTCTAATCAG +
Preference number: 4 (lower is better)
Translates to: RGGKKIPRQRYVKPTEPWFNFFP*NLGSNQ
Trigger: CTGATTAGACCCAAGATTTCATGGGAAGAAGTTAAA...CCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp AAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGCTACAGGTCTCCTaGAGCCTTTATGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: KRVTLFRSVGTMPEKIRQQLQVS*SLYGRG
Trigger: CCCTCTTCCATAAAGGCTGCAGGAGACCTGTAGCTG...TTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp AGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGGTTGACCAGAAGTTaGATCACAGCCTTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: RATSYTGEKSIRDSVHGRGLTRS*ITAFEA
Trigger: TGCTTCAAAGGCTGTGATGCAACTTCTGGTCAACCC...CCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp TGGTTTCAGGGGCACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGGGGTTGACCAGAAGTTaGATCACAGCCTTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: WFQGHITHYHLYAMSHPLGLTRS*ITAFEA
Trigger: TGCTTCAAAGGCTGTGATGCAACTTCTGGTCAACCC...CAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp TCAAGTTTAATCAACCTCACAGCAGCGGGAAGGTGCATCACTCTGTCTTCCCATCAGGATGAGGAAGGGTaGAGACTTCCCAACAAACTC +
Preference number: 4 (lower is better)
Translates to: SSLINLTAAGRCITLSSHQDEEG*RLPNKL
Trigger: GAGTTTGTTGGGAAGTCTGCACCCTTCCTCATCCTG...ATGGGAAGACAGAGTGATGCACCTTCCCGCTGCTGTGAGGTTGATTAAACTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp GGAAAACCCGGGAAAGAACACGTTGAGGAAAAGAGGGTAACACTCTTCCGATCTTGGAAGGCTGTAGGATaGAAAGCTGGAGTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: GKPGKEHVEEKRVTLFRSWKAVG*KAGVLH
Trigger: ATGGAGCACTCCAGCTTTGCATCCTACAGCCTTCCA...AGATCGGAAGAGTGTTACCCTCTTTTCCTCAACGTGTTCTTTCCCGGGTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp ATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTGGTGGAAGGCTGTAGGATaGAAAGCTGGAGTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: MPEKIRQQIKEACQSPHWWKAVG*KAGVLH
Trigger: ATGGAGCACTCCAGCTTTGCATCCTACAGCCTTCCA...CCAGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp CTTTTCACTGAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAAGGCAAGGCCAAGCCCTaGATTGGGGCCAATGAGACC +
Preference number: 4 (lower is better)
Translates to: LFTEGKALLAALDLATEKGKAKP*IGANET
Trigger: GGTCTCATTGGCCCCAATGCAGGGCTTGGCCTTGCC...TTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTCAGTGAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp CACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGCGTGGGCTTCTGGGTTaGATACATCCGGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: HSSDLLGLCQRKSGNRLKRGLLG*IHPGLH
Trigger: ATGGAGACCCGGATGTATGCAACCCAGAAGCCCACG...CTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp CTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGCGTGGGCTTCTGGGTTaGATACATCCGGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LFRSVGTMPEKIRQQIKERGLLG*IHPGLH
Trigger: ATGGAGACCCGGATGTATGCAACCCAGAAGCCCACG...CTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp ATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTGGTCAAGGAGCACCTTCTaGTGCTACTCCTCATGGTCA +
Preference number: 4 (lower is better)
Translates to: MPEKIRQQIKEACQSPHWSRSTF*CYSSWS
Trigger: TGACCATGAGGAGTAGCAGCAGAAGGTGCTCCTTGA...CCAGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp ATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCACAGCAGCGGGAAGGTaGATCACTCTGTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: IEEELQVTQVRRVSGTVSTAAGR*ITLSSH
Trigger: ATGGGAAGACAGAGTGATGCACCTTCCCGCTGCTGT...GGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp TCACAGCTCAAGTTTAATCAACCTCACAGCAGCGGGAAGGTGCATCACTCTGTCTCACTACCACCTCTATaGAATGAGTCACCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: SQLKFNQPHSSGKVHHSVSLPPL*NESPLA
Trigger: TGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGA...GACAGAGTGATGCACCTTCCCGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp CCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTGATCTGTTGGGACTATaGCAGAGAAAATCAGGCAAC +
Preference number: 4 (lower is better)
Translates to: PIKDGPLRHQGIEEELQVDLLGL*QRKSGN
Trigger: GTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATC...AACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp ATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCAAAGCAGATGGACCCTaGAGCCACCAGGATGTAAGG +
Preference number: 4 (lower is better)
Translates to: IEEELQVTQVRRVSGTVSKADGP*SHQDVR
Trigger: CCTTACATCCTGGTGGCTGCAGGGTCCATCTGCTTT...GGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp CACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAAAGCTAGACCCAGCTaGCACTTGGGGGAGCACATG +
Preference number: 4 (lower is better)
Translates to: HSSDLLGLCQRKSGNRLKKARPS*HLGEHM
Trigger: CATGTGCTCCCCCAAGTGGCAGCTGGGTCTAGCTTT...CTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGCTCCTGCAGCCTTTATaGAAGAGGGGAGGGAGTCTG +
Preference number: 4 (lower is better)
Translates to: LFRSVGTMPEKIRQQIKELLQPL*KRGGSL
Trigger: CAGACTCCCTCCCCTCTTCCATAAAGGCTGCAGGAG...CTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp TCAGGGGCACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGAATGTCATATAGGAAGGTaGGCACAATTGGCACCACCA +
Preference number: 4 (lower is better)
Translates to: SGAHYSLPPLCNESPLAECHIGR*AQLAPP
Trigger: TGGTGGTGCCAATTGTGCCCACCTTCCTATATGACA...TTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTGCCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp ATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGAACCCGTCACAGTGTCATATAGGAAGGTaGGCACAATTGGCACCACCA +
Preference number: 4 (lower is better)
Translates to: ITHYHLYAMSHPLQNPSQCHIGR*AQLAPP
Trigger: TGGTGGTGCCAATTGTGCCCACCTTCCTATATGACA...CTGTGACGGGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GGAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGAGAGGGCCCACGAATaGGTTGACCAGAAGTTGCAT +
Preference number: 4 (lower is better)
Translates to: GKEGNTLPICWDYARENQERAHE*VDQKLH
Trigger: ATGCAACTTCTGGTCAACCCATTCGTGGGCCCTCTC...CTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGGAGAGGGCCCACGAATaGGTTGACCAGAAGTTGCAT +
Preference number: 4 (lower is better)
Translates to: EKRVTLFRSVGTMPEKIRERAHE*VDQKLH
Trigger: ATGCAACTTCTGGTCAACCCATTCGTGGGCCCTCTC...CCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp ATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACATCAGTGTAGACACTaGCCAGCATTCCAAGACCTG +
Preference number: 4 (lower is better)
Translates to: IKDGPLRHQGIEEELQVTHQCRH*PAFQDL
Trigger: CAGGTCTTGGAATGCTGGCCAGTGTCTACACTGATG...TGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp TCAGGGGCACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGAATGTAGGATGCAAAGCTaGAGTGCTCCATCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: SGAHYSLPPLCNESPLAECRMQS*SAPSSS
Trigger: ACTACTGGATGGAGCACTCCAGCTTTGCATCCTACA...TTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTGCCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp ATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGAACCCGTCACAGTGTAGGATGCAAAGCTaGAGTGCTCCATCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: ITHYHLYAMSHPLQNPSQCRMQS*SAPSSS
Trigger: ACTACTGGATGGAGCACTCCAGCTTTGCATCCTACA...CTGTGACGGGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CTTGTCAGTCACCCCACTGGTTTCAGGGGCACATTACTCACTACCACCTCTATGTCTCAGGAGAGACTTTaGAAGGCTGTAGGATGCAAA +
Preference number: 4 (lower is better)
Translates to: LVSHPTGFRGTLLTTTSMSQERL*KAVGCK
Trigger: TTTGCATCCTACAGCCTTCCAAAGTCTCTCCTGAGA...CATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCAGTGGGGTGACTGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GGAAAACCCGGGAAAGAACACGTTGAGGAAAAGAGGGTAACACTCTTCCGATCTACCGACCCATCTTGTTaGCCAACACACCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: GKPGKEHVEEKRVTLFRSTDPSC*PTHQRG
Trigger: ACCTCTTTGGTGTGTTGGCCAACAAGATGGGTCGGT...AGATCGGAAGAGTGTTACCCTCTTTTCCTCAACGTGTTCTTTCCCGGGTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp TCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGGCACCACCGGTGGATaGACCTATAGCAAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: SDLLGLCQRKSGNRLKRLGTTGG*TYSKAH
Trigger: ATGGGCTTTGCTATAGGTCCATCCACCGGTGGTGCC...AAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp AAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAAGCCAGGGAAAACCGATaGCCTTTACAATGGCACCAC +
Preference number: 4 (lower is better)
Translates to: KRVTLFRSVGTMPEKIRQARENR*PLQWHH
Trigger: GTGGTGCCATTGTAAAGGCCATCGGTTTTCCCTGGC...TTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGATCCCAGGGAAAGAGGTaGTCACTGAGGCATCATGAA +
Preference number: 4 (lower is better)
Translates to: EELQVTQVRRVSGTVSMGSQGKR*SLRHHE
Trigger: TTCATGATGCCTCAGTGACCACCTCTTTCCCTGGGA...TCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GGAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGCAGGGACAGTGTCCATaGGAGGGGAGGAAAGAAGAT +
Preference number: 4 (lower is better)
Translates to: GKEGNTLPICWDYARENQQGQCP*EGRKED
Trigger: ATCTTCTTTCCTCCCCTCCCATGGACACTGTCCCTG...CTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCTTTTCTCAACTCGGCTaGGAAAACCCGGGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: AAPRHRGRATSYTGEKSIFSQLG*ENPGKN
Trigger: GTTCTTTCCCGGGTTTTCCCAGCCGAGTTGAGAAAA...GATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGAACCCGTCACTTCAAGCTGGCATTTaGCAGCAAGACAATGCTGAG +
Preference number: 4 (lower is better)
Translates to: HITHYHLYAMSHPLQNPSLQAGI*QQDNAE
Trigger: CTCAGCATTGTCTTGCTGCCAAATGCCAGCTTGAAG...TGACGGGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp TGGTTTCAGGGGCACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCTTCAAGCTGGCATTTaGCAGCAAGACAATGCTGAG +
Preference number: 4 (lower is better)
Translates to: WFQGHITHYHLYAMSHPLLQAGI*QQDNAE
Trigger: CTCAGCATTGTCTTGCTGCCAAATGCCAGCTTGAAG...CAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp ACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGGCAGTTTCTTTGTTGGCAAAGCAGATaGACCCTGCAGCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: TPLLLGNLQSGGISRQFLCWQSR*TLQPPG
Trigger: TCCTGGTGGCTGCAGGGTCCATCTGCTTTGCCAACA...AAGAAACTGCCTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp TACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGGCAGTTTCTTGTTGGCAAAGCAGATaGACCCTGCAGCCACCAGGA +
Preference number: 4 (lower is better)
Translates to: YTPPVRKSTIRRDFKAVSCWQSR*TLQPPG
Trigger: TCCTGGTGGCTGCAGGGTCCATCTGCTTTGCCAACA...AGAAACTGCCTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GGTGCATCACTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAACGTGGATGTGCTGTTaGATTTATTGCCTCCTGTTA +
Preference number: 4 (lower is better)
Translates to: GASLCLPIKDGPLRHQGITWMCC*IYCLLL
Trigger: TAACAGGAGGCAATAAATCCAACAGCACATCCACGT...TATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAGTGATGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437980.3
ENST00000440926.3
CDS-3UTR TCA 90 bp AAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAAGTGTCAAACTGGGATaGAATCCCACGCTTTTCAAC +
Preference number: 4 (lower is better)
Translates to: KRWATAAPRHRGRATSYTSVKLG*NPTLFN
Trigger: GTTGAAAAGCGTGGGATTTCATCCCAGTTTGACACT...TGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS-3UTR TCA 90 bp CTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTAAGTGTCAAACTGGGATaGAATCCCACGCTTTTCAAC +
Preference number: 4 (lower is better)
Translates to: LRHQGIEEELQVTQVRRVSVKLG*NPTLFN
Trigger: GTTGAAAAGCGTGGGATTTCATCCCAGTTTGACACT...TACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS-3UTR TCA 90 bp GGAAAACCCGGGAAAGAACACGTTGAGGAAAAGAGGGTAACACTCTTCCGATCTGTTGTTTTTATGAGCTaGGATGGCTTCAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GKPGKEHVEEKRVTLFRSVVFMS*DGFSGW
Trigger: CCAGCCACTGAAGCCATCTCAGCTCATAAAAACAAC...AGATCGGAAGAGTGTTACCCTCTTTTCCTCAACGTGTTCTTTCCCGGGTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp CATCATGAATTCAAGGAGCACCTTCTGCTGCTACTCCTCATGGTCAGGCTCCTCAAGCAGTTGTTTTTATaGGCTGAGATGGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: HHEFKEHLLLLLLMVRLLKQLFL*AEMASV
Trigger: CACTGAAGCCATCTCAGCTCATAAAAACAACTGCTT...GAGGAGCCTGACCATGAGGAGTAGCAGCAGAAGGTGCTCCTTGAATTCATGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000437980.3
ENST00000517776.5
CDS-3UTR TCA 90 bp GGAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGTTGCATCACAGCCTTTaGAGCAAACAGAACCCCGAC +
Preference number: 4 (lower is better)
Translates to: GKEGNTLPICWDYARENQLHHSL*SKQNPD
Trigger: GTCGGGGTTCTGTTTGCTTCAAAGGCTGTGATGCAA...CTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp AGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGCAAACATGGGGATATaGTATCCAATCCTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: RATSYTGEKSIRDSVHGRANMGI*YPILLV
Trigger: CACCAACAGGATTGGATATCATATCCCCATGTTTGC...CCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp AAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACACTGCATTGGGGCCAATaGGACCAAAAATATTGTGAG +
Preference number: 4 (lower is better)
Translates to: KRWATAAPRHRGRATSYTLHWGQ*DQKYCE
Trigger: CTCACAATATTTTTGGTCTCATTGGCCCCAATGCAG...TGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp GGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCGTCACTGAGGCATCATaGATTCAAGGAGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: GTMPEKIRQQIKEACQSPVTEAS*IQGAPS
Trigger: AGAAGGTGCTCCTTGAATTCATGATGCCTCAGTGAC...GGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp GCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCTACAAGTTACACAGGTaGGAAGAGTATCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: AAPRHRGRATSYTGEKSIYKLHR*EEYQGQ
Trigger: CTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTA...GATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp CACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGACCACCTCTATGCAATaGGTCACCCCTTGCAGAACC +
Preference number: 4 (lower is better)
Translates to: HSSDLLGLCQRKSGNRLKTTSMQ*VTPCRT
Trigger: GGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGT...CTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp GGTCTCCATGGGGCAGTCCTGACTCAGAATAGCAAGCTTCTCTTCCTTTGCCGGTTTAACTTCTTCCCATaGAATCTTGGGTCTAATCAG +
Preference number: 4 (lower is better)
Translates to: GLHGAVLTQNSKLLFLCRFNFFP*NLGSNQ
Trigger: CTGATTAGACCCAAGATTTCATGGGAAGAAGTTAAA...CCGGCAAAGGAAGAGAAGCTTGCTATTCTGAGTCAGGACTGCCCCATGGAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS-3UTR GCA 90 bp ACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGGCAGTTTCTTCAGCTACAGGTCTCCTaGAGCCTTTATGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: TPLLLGNLQSGGISRQFLQLQVS*SLYGRG
Trigger: CCCTCTTCCATAAAGGCTGCAGGAGACCTGTAGCTG...AAGAAACTGCCTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp GCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAAAATGAAGATCCAATaGCTTGAAGGGTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: AAPRHRGRATSYTGEKSIKMKIQ*LEGFGP
Trigger: TGGCCCGAACCCTTCAAGGCATTGGATCTTCATTTT...GATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp AAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAAAAATGAAGATCCAATaGCTTGAAGGGTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: KRWATAAPRHRGRATSYTKMKIQ*LEGFGP
Trigger: TGGCCCGAACCCTTCAAGGCATTGGATCTTCATTTT...TGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR GCA 90 bp GAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGTGGAAGGCTGTAGGATaGAAAGCTGGAGTGCTCCAT +
Preference number: 4 (lower is better)
Translates to: EKRVTLFRSVGTMPEKIRWKAVG*KAGVLH
Trigger: ATGGAGCACTCCAGCTTTGCATCCTACAGCCTTCCA...CCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp GAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGTCAAGGAGCACCTTCTaGTGCTACTCCTCATGGTCA +
Preference number: 4 (lower is better)
Translates to: EKRVTLFRSVGTMPEKIRSRSTF*CYSSWS
Trigger: TGACCATGAGGAGTAGCAGCAGAAGGTGCTCCTTGA...CCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp TTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACACAGCAGCGGGAAGGTaGATCACTCTGTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LGLCQRKSGNRLKRLVSHTAAGR*ITLSSH
Trigger: ATGGGAAGACAGAGTGATGCACCTTCCCGCTGCTGT...GTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp GAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATCACTCACTAAAGCTAGACCCAGCTaGCACTTGGGGGAGCACATG +
Preference number: 4 (lower is better)
Translates to: EGKALLAALDLATEKSLTKARPS*HLGEHM
Trigger: CATGTGCTCCCCCAAGTGGCAGCTGGGTCTAGCTTT...AGTGAGTGATTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp TGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTGGTAAGATGCCTTCATCTTaGAGCCCATGTTGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: CQRKSGNRLKRLVSHPTGKMPSS*SPCWCE
Trigger: CTCACACCAACATGGGCTCCAAGATGAAGGCATCTT...ACCAGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS-3UTR CCA 90 bp ACAATGTCACATTACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCTCCTTCAGCAACCGCTaGGGAGCATCCAGAATGGTC +
Preference number: 4 (lower is better)
Translates to: TMSHYTPPVRKSTIRRDFSFSNR*GASRMV
Trigger: GACCATTCTGGATGCTCCCCAGCGGTTGCTGAAGGA...GAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTAATGTGACATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp AAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAAGAAGGTGGGCACAATTaGCACCACCACAGTAAACAG +
Preference number: 4 (lower is better)
Translates to: KRVTLFRSVGTMPEKIRQEGGHN*HHHSKQ
Trigger: CTGTTTACTGTGGTGGTGCCAATTGTGCCCACCTTC...TTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGAGGTGGGATGGTGCTaGCAGTGTCATTCATCCATG +
Preference number: 4 (lower is better)
Translates to: LFRSVGTMPEKIRQQIKEEVGWC*QCHSSM
Trigger: CATGGATGAATGACACTGCCAGCACCATCCCACCTC...CTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CTTGTCAGTCACCCCACTGGTTTCAGGGGCACATTACTCACTACCACCTCTATGCAAAGCCAGCAAACATaGGGATATGATATCCAATCC +
Preference number: 4 (lower is better)
Translates to: LVSHPTGFRGTLLTTTSMQSQQT*GYDIQS
Trigger: GGATTGGATATCATATCCCCATGTTTGCTGGCTTTG...CATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCAGTGGGGTGACTGACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTCAAAGCCAGCAAACATaGGGATATGATATCCAATCC +
Preference number: 4 (lower is better)
Translates to: PIKDGPLRHQGIEEELQVQSQQT*GYDIQS
Trigger: GGATTGGATATCATATCCCCATGTTTGCTGGCTTTG...AACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp CTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGCAAAGCCAGCAAACATaGGGATATGATATCCAATCC +
Preference number: 4 (lower is better)
Translates to: LQVTQVRRVSGTVSMGGEQSQQT*GYDIQS
Trigger: GGATTGGATATCATATCCCCATGTTTGCTGGCTTTG...CTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GAACACGTTGAGGAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCATGTAGGATGCAAAGCTaGAGTGCTCCATCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: EHVEEKRVTLFRSVGTMPCRMQS*SAPSSS
Trigger: ACTACTGGATGGAGCACTCCAGCTTTGCATCCTACA...TGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTCCTCAACGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp ATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACATGTAGGATGCAAAGCTaGAGTGCTCCATCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: IKDGPLRHQGIEEELQVTCRMQS*SAPSSS
Trigger: ACTACTGGATGGAGCACTCCAGCTTTGCATCCTACA...TGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp AAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACATCTCAGGAGAGACTTTaGAAGGCTGTAGGATGCAAA +
Preference number: 4 (lower is better)
Translates to: KRWATAAPRHRGRATSYTSQERL*KAVGCK
Trigger: TTTGCATCCTACAGCCTTCCAAAGTCTCTCCTGAGA...TGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp ATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCGAACACAGAGCAAGCTaGTACCTACTACCAGCATCC +
Preference number: 4 (lower is better)
Translates to: IEEELQVTQVRRVSGTVSEHRAS*YLLPAS
Trigger: GGATGCTGGTAGTAGGTACCAGCTTGCTCTGTGTTC...GGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000519026.5
CDS-3UTR CCA 90 bp GAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATCACTCACTGGCACCACCGGTGGATaGACCTATAGCAAAGCCCAT +
Preference number: 4 (lower is better)
Translates to: EGKALLAALDLATEKSLTGTTGG*TYSKAH
Trigger: ATGGGCTTTGCTATAGGTCCATCCACCGGTGGTGCC...AGTGAGTGATTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTGCCAGGGAAAACCGATaGCCTTTACAATGGCACCAC +
Preference number: 4 (lower is better)
Translates to: VTLFRSVGTMPEKIRQQIARENR*PLQWHH
Trigger: GTGGTGCCATTGTAAAGGCCATCGGTTTTCCCTGGC...AATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GCAATGAGTCACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACCAGGTAGTAGCAGAGTaGAGCATAGACGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: AMSHPLQNPSQLKFNQPHQVVAE*SIDDVD
Trigger: ATCAACATCGTCTATGCTCCACTCTGCTACTACCTG...GTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGTCCCAGGGAAAGAGGTaGTCACTGAGGCATCATGAA +
Preference number: 4 (lower is better)
Translates to: EKRVTLFRSVGTMPEKIRSQGKR*SLRHHE
Trigger: TTCATGATGCCTCAGTGACCACCTCTTTCCCTGGGA...CCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGGAAACTCTTCCGATCTGTTaGGACTATGCCAGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: QVTQVRRVSGTVSMGGEETLPIC*DYAREN
Trigger: ATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGT...TTCCTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCTTTTCTCAACTCGGCTaGGAAAACCCGGGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: GTMPEKIRQQIKEACQSPFSQLG*ENPGKN
Trigger: GTTCTTTCCCGGGTTTTCCCAGCCGAGTTGAGAAAA...GGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGACTTCAAGCTGGCATTTaGCAGCAAGACAATGCTGAG +
Preference number: 4 (lower is better)
Translates to: EELQVTQVRRVSGTVSMGLQAGI*QQDNAE
Trigger: CTCAGCATTGTCTTGCTGCCAAATGCCAGCTTGAAG...TCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp ATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACACTCAGTGAGGTATTaGCAGCTGTTAGCAAGACAG +
Preference number: 4 (lower is better)
Translates to: IKDGPLRHQGIEEELQVTHSVRY*QLLARQ
Trigger: CTGTCTTGCTAACAGCTGCCAATACCTCACTGAGTG...TGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp ATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTGGCACTCAGTGAGGTATTaGCAGCTGTTAGCAAGACAG +
Preference number: 4 (lower is better)
Translates to: MPEKIRQQIKEACQSPHWHSVRY*QLLARQ
Trigger: CTGTCTTGCTAACAGCTGCCAATACCTCACTGAGTG...CCAGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTACTTGGAGCCCATGTTaGTGTGAGGCACTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: VTLFRSVGTMPEKIRQQITWSPC*CEALSE
Trigger: CTCACTGAGTGCCTCACACCAACATGGGCTCCAAGT...AATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276373.10
ENST00000517776.5
CDS-3UTR TCA 90 bp CACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGCCACGGTGTTGTTGTTaGAGAAGGAGAAGATGGTGG +
Preference number: 4 (lower is better)
Translates to: HSSDLLGLCQRKSGNRLKPRCCC*RRRRWW
Trigger: CCACCATCTTCTCCTTCTTCAACAACAACACCGTGG...CTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp AAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAAGTTGTTTTTATGAGCTaGGATGGCTTCAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: KRVTLFRSVGTMPEKIRQVVFMS*DGFSGW
Trigger: CCAGCCACTGAAGCCATCTCAGCTCATAAAAACAAC...TTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp CTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTAAAGCAGTTGTTTTTATaGGCTGAGATGGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: LRHQGIEEELQVTQVRRVKQLFL*AEMASV
Trigger: CACTGAAGCCATCTCAGCTCATAAAAACAACTGCTT...TACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp ACAATGTCACATTACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCTCCATGGGGCAGTCCTaGCTCAGAATAGCAAGCTTC +
Preference number: 4 (lower is better)
Translates to: TMSHYTPPVRKSTIRRDFSMGQS*LRIASF
Trigger: GAAGCTTGCTATTCTGAGTCAGGACTGCCCCATGGA...GAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTAATGTGACATTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp CTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTGTCACTGAGGCATCATaGATTCAAGGAGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: LCQRKSGNRLKRLVSHPTVTEAS*IQGAPS
Trigger: AGAAGGTGCTCCTTGAATTCATGATGCCTCAGTGAC...AGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp GAACACGTTGAGGAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGCAGCAAGACAATGCTaGGAACATTTTCTCAACTCG +
Preference number: 4 (lower is better)
Translates to: EHVEEKRVTLFRSVGTMPAARQC*EHFLNS
Trigger: CGAGTTGAGAAAATGTTCTCAGCATTGTCTTGCTGC...TGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTCCTCAACGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp GAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGCAGCAAGACAATGCTaGGAACATTTTCTCAACTCG +
Preference number: 4 (lower is better)
Translates to: EELQVTQVRRVSGTVSMGAARQC*EHFLNS
Trigger: CGAGTTGAGAAAATGTTCTCAGCATTGTCTTGCTGC...TCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp CTTTTCACTGAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAACTGGAGGTGGGATGGTaGTGGCAGTGTCATTCATCC +
Preference number: 4 (lower is better)
Translates to: LFTEGKALLAALDLATEKLEVGW*WQCHSS
Trigger: GGATGAATGACACTGCCAGCACCATCCCACCTCCAG...TTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTCAGTGAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp GGAAAACCCGGGAAAGAACACGTTGAGGAAAAGAGGGTAACACTCTTCCGATCTAAAATGAAGATCCAATaGCTTGAAGGGTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: GKPGKEHVEEKRVTLFRSKMKIQ*LEGFGP
Trigger: TGGCCCGAACCCTTCAAGGCATTGGATCTTCATTTT...AGATCGGAAGAGTGTTACCCTCTTTTCCTCAACGTGTTCTTTCCCGGGTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp TACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGGCAGTTTCTCAGGATGAGGAAGGGTaGAGACTTCCCAACAAACTC +
Preference number: 4 (lower is better)
Translates to: YTPPVRKSTIRRDFKAVSQDEEG*RLPNKL
Trigger: GAGTTTGTTGGGAAGTCTGCACCCTTCCTCATCCTG...AGAAACTGCCTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp AAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAATCACTACCACCTCTATaGAATGAGTCACCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: KRVTLFRSVGTMPEKIRQSLPPL*NESPLA
Trigger: TGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGA...TTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp ATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCTCACTACCACCTCTATaGAATGAGTCACCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: IEEELQVTQVRRVSGTVSSLPPL*NESPLA
Trigger: TGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGA...GGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp ATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACAGATCTGTTGGGACTATaGCAGAGAAAATCAGGCAAC +
Preference number: 4 (lower is better)
Translates to: IKDGPLRHQGIEEELQVTDLLGL*QRKSGN
Trigger: GTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATC...TGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CTTTTCACTGAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATGGCTGGAGGTGGGATaGTGCTGGCAGTGTCATTCA +
Preference number: 4 (lower is better)
Translates to: LFTEGKALLAALDLATEKWLEVG*CWQCHS
Trigger: TGAATGACACTGCCAGCACCATCCCACCTCCAGCCA...TTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTCAGTGAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGCATCAGTGTAGACACTaGCCAGCATTCCAAGACCTG +
Preference number: 4 (lower is better)
Translates to: LFRSVGTMPEKIRQQIKEHQCRH*PAFQDL
Trigger: CAGGTCTTGGAATGCTGGCCAGTGTCTACACTGATG...CTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp TACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGGCAGTTTCTCATCAGTGTAGACACTaGCCAGCATTCCAAGACCTG +
Preference number: 4 (lower is better)
Translates to: YTPPVRKSTIRRDFKAVSHQCRH*PAFQDL
Trigger: CAGGTCTTGGAATGCTGGCCAGTGTCTACACTGATG...AGAAACTGCCTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GAACACGTTGAGGAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCATCTCAGGAGAGACTTTaGAAGGCTGTAGGATGCAAA +
Preference number: 4 (lower is better)
Translates to: EHVEEKRVTLFRSVGTMPSQERL*KAVGCK
Trigger: TTTGCATCCTACAGCCTTCCAAAGTCTCTCCTGAGA...TGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTCCTCAACGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGACAGGTAGTAGCAGAGTaGAGCATAGACGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: EELQVTQVRRVSGTVSMGQVVAE*SIDDVD
Trigger: ATCAACATCGTCTATGCTCCACTCTGCTACTACCTG...TCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCAGGTAGTAGCAGAGTaGAGCATAGACGATGTTGAT +
Preference number: 4 (lower is better)
Translates to: GTMPEKIRQQIKEACQSPQVVAE*SIDDVD
Trigger: ATCAACATCGTCTATGCTCCACTCTGCTACTACCTG...GGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CTTTTCACTGAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAAACATCCGGGTCTCCATaGGGCAGTCCTGACTCAGAA +
Preference number: 4 (lower is better)
Translates to: LFTEGKALLAALDLATEKTSGSP*GSPDSE
Trigger: TTCTGAGTCAGGACTGCCCCATGGAGACCCGGATGT...TTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTCAGTGAAAAG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp ATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCGAGGAAATTCCTTCGTaGGCTTCTGGGTTGCATACA +
Preference number: 4 (lower is better)
Translates to: IEEELQVTQVRRVSGTVSEEIPS*ASGLHT
Trigger: TGTATGCAACCCAGAAGCCCACGAAGGAATTTCCTC...GGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp ATGTCACATTACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGTCTTCCCATAAAAGATaGGCCACTGCGGCACCAAGG +
Preference number: 4 (lower is better)
Translates to: MSHYTPPVRKSTIRRDFKSSHKR*ATAAPR
Trigger: CCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGA...CTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTAATGTGACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGAACCCGTCAACTCTTCCGATCTGTTaGGACTATGCCAGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: HITHYHLYAMSHPLQNPSTLPIC*DYAREN
Trigger: ATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGT...TGACGGGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp AGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGCAAAACTCTTCAAGCTaGCATTTGGCAGCAAGACAA +
Preference number: 4 (lower is better)
Translates to: RATSYTGEKSIRDSVHGRQNSSS*HLAARQ
Trigger: TTGTCTTGCTGCCAAATGCCAGCTTGAAGAGTTTTG...CCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp AGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATCACTCAGTGAGGTATTaGCAGCTGTTAGCAAGACAG +
Preference number: 4 (lower is better)
Translates to: RGRATSYTGEKSIRDSVHHSVRY*QLLARQ
Trigger: CTGTCTTGCTAACAGCTGCCAATACCTCACTGAGTG...ATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp ACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGAACCCGTCACAGCTCTGGTCTCATTCTTCATaGAATAAAGTTGCCTCTGTT +
Preference number: 4 (lower is better)
Translates to: THYHLYAMSHPLQNPSQLWSHSS*NKVASV
Trigger: AACAGAGGCAACTTTATTCCATGAAGAATGAGACCA...GAGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS-3UTR TCA 90 bp ATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACAAAGCAGTTGTTTTTATaGGCTGAGATGGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: IKDGPLRHQGIEEELQVTKQLFL*AEMASV
Trigger: CACTGAAGCCATCTCAGCTCATAAAAACAACTGCTT...TGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR TCA 90 bp ATGTCACATTACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGTTGCATCACAGCCTTTaGAGCAAACAGAACCCCGAC +
Preference number: 4 (lower is better)
Translates to: MSHYTPPVRKSTIRRDFKLHHSL*SKQNPD
Trigger: GTCGGGGTTCTGTTTGCTTCAAAGGCTGTGATGCAA...CTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTAATGTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp TCTTCTACTTTTATTTCTAAGAGTCTAAGAGGTTCAGAAAAGGTAGGAACACACGTATGTGAAGCCCACTaGGCCGTGGGCTCAGCCATG +
Preference number: 4 (lower is better)
Translates to: SSTFISKSLRGSEKVGTHVCEAH*AVGSAM
Trigger: CATGGCTGAGCCCACGGCTCAGTGGGCTTCACATAC...GTGTGTTCCTACCTTTTCTGAACCTCTTAGACTCTTAGAAATAAAAGTAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp AAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAATTGCCTCCTGTTATCTaGGGATTCTGTGTATGTGTG +
Preference number: 4 (lower is better)
Translates to: KRVTLFRSVGTMPEKIRQLPPVI*GFCVCV
Trigger: CACACATACACAGAATCCTCAGATAACAGGAGGCAA...TTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437980.3
ENST00000440926.3
CDS-3UTR GCA 90 bp CTTTTCACTGAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAACAGCTACAGGTCTCCTaGAGCCTTTATGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: LFTEGKALLAALDLATEKQLQVS*SLYGRG
Trigger: CCCTCTTCCATAAAGGCTGCAGGAGACCTGTAGCTG...TTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTCAGTGAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp TACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGGCAGTTTCTGGGTTGACCAGAAGTTaGATCACAGCCTTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: YTPPVRKSTIRRDFKAVSGLTRS*ITAFEA
Trigger: TGCTTCAAAGGCTGTGATGCAACTTCTGGTCAACCC...AGAAACTGCCTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp TTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACGGGTTGACCAGAAGTTaGATCACAGCCTTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LGLCQRKSGNRLKRLVSHGLTRS*ITAFEA
Trigger: TGCTTCAAAGGCTGTGATGCAACTTCTGGTCAACCC...GTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp GAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATCACTCACTTCAAGGAGCACCTTCTaGTGCTACTCCTCATGGTCA +
Preference number: 4 (lower is better)
Translates to: EGKALLAALDLATEKSLTSRSTF*CYSSWS
Trigger: TGACCATGAGGAGTAGCAGCAGAAGGTGCTCCTTGA...AGTGAGTGATTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp TGGTTTCAGGGGCACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGTGCTGTTGGATTTATTaGCTCCTGTTATCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: WFQGHITHYHLYAMSHPLCCWIY*LLLSED
Trigger: ATCCTCAGATAACAGGAGGCAATAAATCCAACAGCA...CAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000437980.3
ENST00000440926.3
CDS-3UTR CCA 90 bp CTTTTCACTGAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATCTTGGAGCCCATGTTaGTGTGAGGCACTCAGTGAG +
Preference number: 4 (lower is better)
Translates to: LFTEGKALLAALDLATEKSWSPC*CEALSE
Trigger: CTCACTGAGTGCCTCACACCAACATGGGCTCCAAGA...TTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTCAGTGAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS-3UTR CCA 90 bp TACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGGCAGTTTCTAAGATGCCTTCATCTTaGAGCCCATGTTGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: YTPPVRKSTIRRDFKAVSKMPSS*SPCWCE
Trigger: CTCACACCAACATGGGCTCCAAGATGAAGGCATCTT...AGAAACTGCCTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS-3UTR CCA 90 bp TTCACTGAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATCAGAGAGGGCCCACGAATaGGTTGACCAGAAGTTGCAT +
Preference number: 4 (lower is better)
Translates to: FTEGKALLAALDLATEKSERAHE*VDQKLH
Trigger: ATGCAACTTCTGGTCAACCCATTCGTGGGCCCTCTC...TGATTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTCAGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp ATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAAAGCCAGCAAACATaGGGATATGATATCCAATCC +
Preference number: 4 (lower is better)
Translates to: IKDGPLRHQGIEEELQVTQSQQT*GYDIQS
Trigger: GGATTGGATATCATATCCCCATGTTTGCTGGCTTTG...TGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CCA 90 bp GAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATCACTCACTCATCAGTGTAGACACTaGCCAGCATTCCAAGACCTG +
Preference number: 4 (lower is better)
Translates to: EGKALLAALDLATEKSLTHQCRH*PAFQDL
Trigger: CAGGTCTTGGAATGCTGGCCAGTGTCTACACTGATG...AGTGAGTGATTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp TCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTTGTAGGATGCAAAGCTaGAGTGCTCCATCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: SDLLGLCQRKSGNRLKRLCRMQS*SAPSSS
Trigger: ACTACTGGATGGAGCACTCCAGCTTTGCATCCTACA...AAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp ATGTCACATTACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGACCGACCCATCTTGTTaGCCAACACACCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: MSHYTPPVRKSTIRRDFKTDPSC*PTHQRG
Trigger: ACCTCTTTGGTGTGTTGGCCAACAAGATGGGTCGGT...CTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTAATGTGACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATCACTCACTGAACACAGAGCAAGCTaGTACCTACTACCAGCATCC +
Preference number: 4 (lower is better)
Translates to: EGKALLAALDLATEKSLTEHRAS*YLLPAS
Trigger: GGATGCTGGTAGTAGGTACCAGCTTGCTCTGTGTTC...AGTGAGTGATTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
CDS-3UTR CCA 90 bp CACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGGAGGAAATTCCTTCGTaGGCTTCTGGGTTGCATACA +
Preference number: 4 (lower is better)
Translates to: HSSDLLGLCQRKSGNRLKEEIPS*ASGLHT
Trigger: TGTATGCAACCCAGAAGCCCACGAAGGAATTTCCTC...CTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp TTCACTGAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATCATCTTCCCATAAAAGATaGGCCACTGCGGCACCAAGG +
Preference number: 4 (lower is better)
Translates to: FTEGKALLAALDLATEKSSSHKR*ATAAPR
Trigger: CCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGA...TGATTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTCAGTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GAACACGTTGAGGAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAACTCTTCCGATCTGTTaGGACTATGCCAGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: EHVEEKRVTLFRSVGTMPTLPIC*DYAREN
Trigger: ATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGT...TGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTCCTCAACGTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp CTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGTTTTCTCAACTCGGCTaGGAAAACCCGGGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: LFRSVGTMPEKIRQQIKEFSQLG*ENPGKN
Trigger: GTTCTTTCCCGGGTTTTCCCAGCCGAGTTGAGAAAA...CTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp TACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGGCAGTTTCTTTTTCTCAACTCGGCTaGGAAAACCCGGGAAAGAAC +
Preference number: 4 (lower is better)
Translates to: YTPPVRKSTIRRDFKAVSFSQLG*ENPGKN
Trigger: GTTCTTTCCCGGGTTTTCCCAGCCGAGTTGAGAAAA...AGAAACTGCCTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp TCAAGTTTAATCAACCTCACAGCAGCGGGAAGGTGCATCACTCTGTCTTCCCATACGTGGATGTGCTGTTaGATTTATTGCCTCCTGTTA +
Preference number: 4 (lower is better)
Translates to: SSLINLTAAGRCITLSSHTWMCC*IYCLLL
Trigger: TAACAGGAGGCAATAAATCCAACAGCACATCCACGT...ATGGGAAGACAGAGTGATGCACCTTCCCGCTGCTGTGAGGTTGATTAAACTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437980.3
ENST00000440926.3
CDS-3UTR TCA 90 bp TACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGGCAGTTTCTGCAAACATGGGGATATaGTATCCAATCCTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: YTPPVRKSTIRRDFKAVSANMGI*YPILLV
Trigger: CACCAACAGGATTGGATATCATATCCCCATGTTTGC...AGAAACTGCCTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp GTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTGCAAACATGGGGATATaGTATCCAATCCTGTTGGTG +
Preference number: 4 (lower is better)
Translates to: VTLFRSVGTMPEKIRQQIANMGI*YPILLV
Trigger: CACCAACAGGATTGGATATCATATCCCCATGTTTGC...AATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp TTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACTACAAGTTACACAGGTaGGAAGAGTATCAGGGACAG +
Preference number: 4 (lower is better)
Translates to: LGLCQRKSGNRLKRLVSHYKLHR*EEYQGQ
Trigger: CTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTA...GTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp AGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGTTTAACTTCTTCCCATaGAATCTTGGGTCTAATCAG +
Preference number: 4 (lower is better)
Translates to: RATSYTGEKSIRDSVHGRFNFFP*NLGSNQ
Trigger: CTGATTAGACCCAAGATTTCATGGGAAGAAGTTAAA...CCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp GTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAATGAAGATCCAATaGCTTGAAGGGTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: VTLFRSVGTMPEKIRQQIKMKIQ*LEGFGP
Trigger: TGGCCCGAACCCTTCAAGGCATTGGATCTTCATTTT...AATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp GGTCTCATTCTTCATGGAATAAAGTTGCCTCTGTTTTCCATTATGGACATCACTACAGCAGCGGGAAGGTaGATCACTCTGTCTTCCCAT +
Preference number: 4 (lower is better)
Translates to: GLILHGIKLPLFSIMDITTAAGR*ITLSSH
Trigger: ATGGGAAGACAGAGTGATGCACCTTCCCGCTGCTGT...AGTGATGTCCATAATGGAAAACAGAGGCAACTTTATTCCATGAAGAATGAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS-3UTR GCA 90 bp ATGTCACATTACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGTCACTACCACCTCTATaGAATGAGTCACCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: MSHYTPPVRKSTIRRDFKSLPPL*NESPLA
Trigger: TGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGA...CTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTAATGTGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp ATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACATGCTGTTGGATTTATTaGCTCCTGTTATCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: IKDGPLRHQGIEEELQVTCCWIY*LLLSED
Trigger: ATCCTCAGATAACAGGAGGCAATAAATCCAACAGCA...TGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437980.3
ENST00000440926.3
CDS-3UTR CCA 90 bp ACAATGTCACATTACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCTGTCATATAGGAAGGTaGGCACAATTGGCACCACCA +
Preference number: 4 (lower is better)
Translates to: TMSHYTPPVRKSTIRRDFCHIGR*AQLAPP
Trigger: TGGTGGTGCCAATTGTGCCCACCTTCCTATATGACA...GAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTAATGTGACATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp ACAATGTCACATTACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCTGTAGGATGCAAAGCTaGAGTGCTCCATCCAGTAGT +
Preference number: 4 (lower is better)
Translates to: TMSHYTPPVRKSTIRRDFCRMQS*SAPSSS
Trigger: ACTACTGGATGGAGCACTCCAGCTTTGCATCCTACA...GAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTAATGTGACATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp TCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTTCTCAGGAGAGACTTTaGAAGGCTGTAGGATGCAAA +
Preference number: 4 (lower is better)
Translates to: SDLLGLCQRKSGNRLKRLSQERL*KAVGCK
Trigger: TTTGCATCCTACAGCCTTCCAAAGTCTCTCCTGAGA...AAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp TTCACTGAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATCAACCGACCCATCTTGTTaGCCAACACACCAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: FTEGKALLAALDLATEKSTDPSC*PTHQRG
Trigger: ACCTCTTTGGTGTGTTGGCCAACAAGATGGGTCGGT...TGATTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTCAGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp ACAATGTCACATTACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCGAGGAAATTCCTTCGTaGGCTTCTGGGTTGCATACA +
Preference number: 4 (lower is better)
Translates to: TMSHYTPPVRKSTIRRDFEEIPS*ASGLHT
Trigger: TGTATGCAACCCAGAAGCCCACGAAGGAATTTCCTC...GAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTAATGTGACATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp ATGTCACATTACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGGAGGAAATTCCTTCGTaGGCTTCTGGGTTGCATACA +
Preference number: 4 (lower is better)
Translates to: MSHYTPPVRKSTIRRDFKEEIPS*ASGLHT
Trigger: TGTATGCAACCCAGAAGCCCACGAAGGAATTTCCTC...CTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTAATGTGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp GAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAAAACTCTTCAAGCTaGCATTTGGCAGCAAGACAA +
Preference number: 4 (lower is better)
Translates to: EKRVTLFRSVGTMPEKIRQNSSS*HLAARQ
Trigger: TTGTCTTGCTGCCAAATGCCAGCTTGAAGAGTTTTG...CCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp TTCACTGAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATCACGAAGGAAACTCACTTaGAGCCCATGTTGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: FTEGKALLAALDLATEKSRRKLT*SPCWCE
Trigger: CTCACACCAACATGGGCTCCAAGTGAGTTTCCTTCG...TGATTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTCAGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276373.10
ENST00000517776.5
CDS-3UTR GCA 90 bp TCTTCTACTTTTATTTCTAAGAGTCTAAGAGGTTCAGAAAAGGTAGGAACACACAGGAGCACCTTCTGCTaGTACTCCTCATGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: SSTFISKSLRGSEKVGTHRSTFC*YSSWSG
Trigger: GCCTGACCATGAGGAGTAGCAGCAGAAGGTGCTCCT...GTGTGTTCCTACCTTTTCTGAACCTCTTAGACTCTTAGAAATAAAAGTAGAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp ACAATGTCACATTACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCGATCTGTTGGGACTATaGCAGAGAAAATCAGGCAAC +
Preference number: 4 (lower is better)
Translates to: TMSHYTPPVRKSTIRRDFDLLGL*QRKSGN
Trigger: GTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATC...GAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTAATGTGACATTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp TCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTCAAAGCCAGCAAACATaGGGATATGATATCCAATCC +
Preference number: 4 (lower is better)
Translates to: SDLLGLCQRKSGNRLKRLQSQQT*GYDIQS
Trigger: GGATTGGATATCATATCCCCATGTTTGCTGGCTTTG...AAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp ATGTCACATTACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGTCTCAGGAGAGACTTTaGAAGGCTGTAGGATGCAAA +
Preference number: 4 (lower is better)
Translates to: MSHYTPPVRKSTIRRDFKSQERL*KAVGCK
Trigger: TTTGCATCCTACAGCCTTCCAAAGTCTCTCCTGAGA...CTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTAATGTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp GGTCTCATTCTTCATGGAATAAAGTTGCCTCTGTTTTCCATTATGGACATCACTGTCACTGAGGCATCATaGATTCAAGGAGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: GLILHGIKLPLFSIMDITVTEAS*IQGAPS
Trigger: AGAAGGTGCTCCTTGAATTCATGATGCCTCAGTGAC...AGTGATGTCCATAATGGAAAACAGAGGCAACTTTATTCCATGAAGAATGAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS-3UTR TCA 90 bp AGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATTTTAACTTCTTCCCATaGAATCTTGGGTCTAATCAG +
Preference number: 4 (lower is better)
Translates to: RGRATSYTGEKSIRDSVHFNFFP*NLGSNQ
Trigger: CTGATTAGACCCAAGATTTCATGGGAAGAAGTTAAA...ATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp TTCACTGAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATCATTGCCTCCTGTTATCTaGGGATTCTGTGTATGTGTG +
Preference number: 4 (lower is better)
Translates to: FTEGKALLAALDLATEKSLPPVI*GFCVCV
Trigger: CACACATACACAGAATCCTCAGATAACAGGAGGCAA...TGATTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTCAGTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000437980.3
ENST00000440926.3
CDS-3UTR CCA 90 bp GAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATCACTCACTACTCTTCCGATCTGTTaGGACTATGCCAGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: EGKALLAALDLATEKSLTTLPIC*DYAREN
Trigger: ATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGT...AGTGAGTGATTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp ATGTCACATTACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGCAAAACTCTTCAAGCTaGCATTTGGCAGCAAGACAA +
Preference number: 4 (lower is better)
Translates to: MSHYTPPVRKSTIRRDFKQNSSS*HLAARQ
Trigger: TTGTCTTGCTGCCAAATGCCAGCTTGAAGAGTTTTG...CTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTAATGTGACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CCA 90 bp AAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACTAAACATACACTCCTaGTCTCATTCTTCATGGAAT +
Preference number: 4 (lower is better)
Translates to: KRVTLFRSVGTMPEKIRQLNIHS*SHSSWN
Trigger: ATTCCATGAAGAATGAGACCAGGAGTGTATGTTTAG...TTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS-3UTR TCA 90 bp TTCACTGAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATCAAAGCAGTTGTTTTTATaGGCTGAGATGGCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: FTEGKALLAALDLATEKSKQLFL*AEMASV
Trigger: CACTGAAGCCATCTCAGCTCATAAAAACAACTGCTT...TGATTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTCAGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp GTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTTTTAACTTCTTCCCATaGAATCTTGGGTCTAATCAG +
Preference number: 4 (lower is better)
Translates to: VTLFRSVGTMPEKIRQQIFNFFP*NLGSNQ
Trigger: CTGATTAGACCCAAGATTTCATGGGAAGAAGTTAAA...AATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR GCA 90 bp TGGTCTCATTCTTCATGGAATAAAGTTGCCTCTGTTTTCCATTATGGACATCACAAAATGAAGATCCAATaGCTTGAAGGGTTCGGGCCA +
Preference number: 4 (lower is better)
Translates to: WSHSSWNKVASVFHYGHHKMKIQ*LEGFGP
Trigger: TGGCCCGAACCCTTCAAGGCATTGGATCTTCATTTT...GTGATGTCCATAATGGAAAACAGAGGCAACTTTATTCCATGAAGAATGAGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS-3UTR CCA 90 bp TTCACTGAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATCACAAAACTCTTCAAGCTaGCATTTGGCAGCAAGACAA +
Preference number: 4 (lower is better)
Translates to: FTEGKALLAALDLATEKSQNSSS*HLAARQ
Trigger: TTGTCTTGCTGCCAAATGCCAGCTTGAAGAGTTTTG...TGATTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTCAGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR TCA 90 bp TCTTCTACTTTTATTTCTAAGAGTCTAAGAGGTTCAGAAAAGGTAGGAACACACCTGCATTGGGGCCAATaGGACCAAAAATATTGTGAG +
Preference number: 4 (lower is better)
Translates to: SSTFISKSLRGSEKVGTHLHWGQ*DQKYCE
Trigger: CTCACAATATTTTTGGTCTCATTGGCCCCAATGCAG...GTGTGTTCCTACCTTTTCTGAACCTCTTAGACTCTTAGAAATAAAAGTAGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS GCA 90 bp ATGTTGTCCAGGAGCAAAGCGACGAATACCACCACCAGCACCAGCTaGCGGGACGCTCTCCCCTCCTTCAGCAACCGCTGGGGAGCATCC +
Preference number: 5 (lower is better)
Translates to: MLSRSKATNTTTSTS*RDALPSFSNRWGAS
Trigger: GGATGCTCCCCAGCGGTTGCTGAAGGAGGGGAGAGCGTCCCGGCAGCTGGTGCTGGTGGTGGTATTCGTCGCTTTGCTCCTGGACAACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000381608.8
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
ENST00000522513.5
CDS-3UTR CAA 90 bp GGGAGGGGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTCGTGGGCTTCTGGGTaGCATACATCCGGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: GRGGKKIPRQRYVKPTEPSWASG*HTSGSP
Trigger: TGGAGACCCGGATGTATGCAACCCAGAAGCCCACGA...CGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCCCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp GGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTTCGTGGGCTTCTGGGTaGCATACATCCGGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: GGKKIPRQRYVKPTEPWASWASG*HTSGSP
Trigger: TGGAGACCCGGATGTATGCAACCCAGAAGCCCACGA...AGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp GGTCTCCATGGGGCAGTCCTGACTCAGAATAGCAAGCTTCTCTTCCTTTGCCGGAAGAGGGGAGTCCCCTaGGCACTCTCAGGAGAGACT +
Preference number: 5 (lower is better)
Translates to: GLHGAVLTQNSKLLFLCRKRGVP*ALSGET
Trigger: AGTCTCTCCTGAGAGTGCCAAGGGGACTCCCCTCTT...CCGGCAAAGGAAGAGAAGCTTGCTATTCTGAGTCAGGACTGCCCCATGGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS-3UTR CAA 90 bp GGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTAGCCACCGACCCATCTaGTTGGCCAACACACCAAAG +
Preference number: 5 (lower is better)
Translates to: GGKKIPRQRYVKPTEPWASHRPI*LANTPK
Trigger: CTTTGGTGTGTTGGCCAACAAGATGGGTCGGTGGCT...AGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS TCA 90 bp ACCGACCCATCTTGTTGGCCAACACACCAAAGAGGTTGGTGCCAATaGGGTAGGACACACTGGCAGGCAAGAAAGCTAGACCCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: TDPSCWPTHQRGWCQ*GRTHWQARKLDPAA
Trigger: GGCAGCTGGGTCTAGCTTTCTTGCCTGCCAGTGTGTCCTACCTCATTGGCACCAACCTCTTTGGTGTGTTGGCCAACAAGATGGGTCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276373.10
ENST00000381608.8
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS CCA 90 bp CTTAGGGAAGGTCCTGTGACAGCTACAGGTCTCCTGCAGCCTTTATaGAAGAGGGGAGGGAGTCTGCCCAGACGAAGGAAACTCACTTGG +
Preference number: 5 (lower is better)
Translates to: LREGPVTATGLLQPL*KRGGSLPRRRKLTW
Trigger: CCAAGTGAGTTTCCTTCGTCTGGGCAGACTCCCTCCCCTCTTCCATAAAGGCTGCAGGAGACCTGTAGCTGTCACAGGACCTTCCCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276373.10
ENST00000517776.5
ENST00000519026.5
ENST00000522513.5
CDS-3UTR CAA 90 bp GATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGGGGCCCACGAATGGGTaGACCAGAAGTTGCATCACA +
Preference number: 5 (lower is better)
Translates to: DGPLRHQGIEEELQVTQVGPTNG*TRSCIT
Trigger: TGTGATGCAACTTCTGGTCAACCCATTCGTGGGCCC...CACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp GTCACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACAGCAGCGAAGAGGGGAGTCCCCTaGGCACTCTCAGGAGAGACT +
Preference number: 5 (lower is better)
Translates to: VTPCRTRHSSSLINLTAAKRGVP*ALSGET
Trigger: AGTCTCTCCTGAGAGTGCCAAGGGGACTCCCCTCTT...CGCTGCTGTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp CTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGAAGAGGGGAGTCCCCTaGGCACTCTCAGGAGAGACT +
Preference number: 5 (lower is better)
Translates to: LCLPIKDGPLRHQGIEEEKRGVP*ALSGET
Trigger: AGTCTCTCCTGAGAGTGCCAAGGGGACTCCCCTCTT...CTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp GGTGCATCACTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATATCGTGGGCTTCTGGGTaGCATACATCCGGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: GASLCLPIKDGPLRHQGISWASG*HTSGSP
Trigger: TGGAGACCCGGATGTATGCAACCCAGAAGCCCACGA...TATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAGTGATGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp CTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGGCAATGAGTCACCCCTaGCAGAACCCGTCACAGCTC +
Preference number: 5 (lower is better)
Translates to: LCLPIKDGPLRHQGIEEEAMSHP*QNPSQL
Trigger: GAGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGC...CTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS TCA 90 bp ACCGACCCATCTTGTTGGCCAACACACCAAAGAGGTTGGTGCCAATaGGGTAGGACACACTGGCAGGCAAGAAAGCTAGACCTGCAGCCA +
Preference number: 5 (lower is better)
Translates to: TDPSCWPTHQRGWCQ*GRTHWQARKLDLQP
Trigger: TGGCTGCAGGTCTAGCTTTCTTGCCTGCCAGTGTGTCCTACCTCATTGGCACCAACCTCTTTGGTGTGTTGGCCAACAAGATGGGTCGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265808.11
ENST00000519026.5
CDS GCA 90 bp GCAGGAGAGGCGAGGGCATGTGGGGAACTTCCGGCATGGCCGAGGTaGAGAGAAGAGTTGACTTCTTTGAACTCCATGTCATATAGGAAG +
Preference number: 5 (lower is better)
Translates to: AGEARACGELPAWPR*REELTSLNSMSYRK
Trigger: CTTCCTATATGACATGGAGTTCAAAGAAGTCAACTCTTCTCTGCACCTCGGCCATGCCGGAAGTTCCCCACATGCCCTCGCCTCTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000381608.8
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
ENST00000522513.5
CDS CCA 90 bp CTTAGGGAAGGTCCTGTGACAGCTACAGGTCTCCTGCAGCCTTTATaGAAGAGGGGAGGGAGTCTGCCCAGACGAAGGAAACTCACTTCA +
Preference number: 5 (lower is better)
Translates to: LREGPVTATGLLQPL*KRGGSLPRRRKLTS
Trigger: TGAAGTGAGTTTCCTTCGTCTGGGCAGACTCCCTCCCCTCTTCCATAAAGGCTGCAGGAGACCTGTAGCTGTCACAGGACCTTCCCTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS-3UTR CAA 90 bp GGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTCCCACGCTTTTCAACTaGCCAGCTTATCCTCTACCA +
Preference number: 5 (lower is better)
Translates to: GGKKIPRQRYVKPTEPWAPTLFN*PAYPLP
Trigger: TGGTAGAGGATAAGCTGGCAAGTTGAAAAGCGTGGG...AGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS-3UTR CAA 90 bp GGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTACAGTAAACAGCATGTaGTCCAGGAGCAAAGCGACG +
Preference number: 5 (lower is better)
Translates to: GGKKIPRQRYVKPTEPWATVNSM*SRSKAT
Trigger: CGTCGCTTTGCTCCTGGACAACATGCTGTTTACTGT...AGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp GACCATGAGCCAGGGAAAACCGATGGCCTTTACAATGGCACCACCGGTGGATGGACAGTAAACAGCATGTaGTCCAGGAGCAAAGCGACG +
Preference number: 5 (lower is better)
Translates to: DHEPGKTDGLYNGTTGGWTVNSM*SRSKAT
Trigger: CGTCGCTTTGCTCCTGGACAACATGCTGTTTACTGT...CCATCCACCGGTGGTGCCATTGTAAAGGCCATCGGTTTTCCCTGGCTCATGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS-3UTR CAA 90 bp AGGGGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCCACGGTGTTGTTGTaGAAGAAGGAGAAGATGGTG +
Preference number: 5 (lower is better)
Translates to: RGGKKIPRQRYVKPTEPWATVLL*KKEKMV
Trigger: CACCATCTTCTCCTTCTTCAACAACAACACCGTGGC...CCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp GGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTGCCACGGTGTTGTTGTaGAAGAAGGAGAAGATGGTG +
Preference number: 5 (lower is better)
Translates to: GGKKIPRQRYVKPTEPWAATVLL*KKEKMV
Trigger: CACCATCTTCTCCTTCTTCAACAACAACACCGTGGC...AGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp AGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGGGCCCACGAATGGGTaGACCAGAAGTTGCATCACA +
Preference number: 5 (lower is better)
Translates to: RWATAAPRHRGRATSYTGGPTNG*TRSCIT
Trigger: TGTGATGCAACTTCTGGTCAACCCATTCGTGGGCCC...ACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp CCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTAAGAGGGGAGTCCCCTaGGCACTCTCAGGAGAGACT +
Preference number: 5 (lower is better)
Translates to: PIKDGPLRHQGIEEELQVKRGVP*ALSGET
Trigger: AGTCTCTCCTGAGAGTGCCAAGGGGACTCCCCTCTT...AACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp AGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTAGCCACCGACCCATCTaGTTGGCCAACACACCAAAG +
Preference number: 5 (lower is better)
Translates to: RWATAAPRHRGRATSYTGSHRPI*LANTPK
Trigger: CTTTGGTGTGTTGGCCAACAAGATGGGTCGGTGGCT...ACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp CTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTAGCCACCGACCCATCTaGTTGGCCAACACACCAAAG +
Preference number: 5 (lower is better)
Translates to: LSSHKRWATAAPRHRGRASHRPI*LANTPK
Trigger: CTTTGGTGTGTTGGCCAACAAGATGGGTCGGTGGCT...AGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS TCA 90 bp GAGAGGGCCCACGAATGGGTTGACCAGAAGTTGCATCACAGCCTTTaGAGCAAACAGAACCCCGACCCGGGTAATCTCTTCCTCCAAGAA +
Preference number: 5 (lower is better)
Translates to: ERAHEWVDQKLHHSL*SKQNPDPGNLFLQE
Trigger: TTCTTGGAGGAAGAGATTACCCGGGTCGGGGTTCTGTTTGCTTCAAAGGCTGTGATGCAACTTCTGGTCAACCCATTCGTGGGCCCTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000381608.8
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
ENST00000522513.5
CDS TCA 90 bp ACCGACCCATCTTGTTGGCCAACACACCAAAGAGGTTGGTGCCAATaGGGTAGGACACACTGGCAGGCAAGAAAGCTAGACCTGTGGAAG +
Preference number: 5 (lower is better)
Translates to: TDPSCWPTHQRGWCQ*GRTHWQARKLDLWK
Trigger: CTTCCACAGGTCTAGCTTTCTTGCCTGCCAGTGTGTCCTACCTCATTGGCACCAACCTCTTTGGTGTGTTGGCCAACAAGATGGGTCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519171.1
CDS-3UTR CAA 90 bp GGAGGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTACAGCCACGGTGTTGTaGTTGAAGAAGGAGAAGATG +
Preference number: 5 (lower is better)
Translates to: GGKKIPRQRYVKPTEPWATATVL*LKKEKM
Trigger: CATCTTCTCCTTCTTCAACAACAACACCGTGGCTGT...AGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp CTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGCACCGACCCATCTTGTaGGCCAACACACCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: LQVTQVRRVSGTVSMGGEHRPIL*ANTPKR
Trigger: CCTCTTTGGTGTGTTGGCCAACAAGATGGGTCGGTG...CTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp CATCATGAATTCAAGGAGCACCTTCTGCTGCTACTCCTCATGGTCAGGCTCCTCCACCGACCCATCTTGTaGGCCAACACACCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: HHEFKEHLLLLLLMVRLLHRPIL*ANTPKR
Trigger: CCTCTTTGGTGTGTTGGCCAACAAGATGGGTCGGTG...GAGGAGCCTGACCATGAGGAGTAGCAGCAGAAGGTGCTCCTTGAATTCATGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437980.3
ENST00000517776.5
CDS-3UTR CAA 90 bp GCAATGAGTCACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACGCAATGAGTCACCCCTaGCAGAACCCGTCACAGCTC +
Preference number: 5 (lower is better)
Translates to: AMSHPLQNPSQLKFNQPHAMSHP*QNPSQL
Trigger: GAGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGC...GTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp GATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGGCACTCAGTGAGGTATaGGCAGCTGTTAGCAAGACA +
Preference number: 5 (lower is better)
Translates to: DGPLRHQGIEEELQVTQVALSEV*AAVSKT
Trigger: TGTCTTGCTAACAGCTGCCAATACCTCACTGAGTGC...CACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS TCA 90 bp AATCCACCATGCCTATGGCAAGGCCAAGCCCTGCATTGGGGCCAATaGGACCAAAAATATTGTGAGCCAGAGGAACACAGAGCAAGCTGG +
Preference number: 5 (lower is better)
Translates to: NPPCLWQGQALHWGQ*DQKYCEPEEHRASW
Trigger: CCAGCTTGCTCTGTGTTCCTCTGGCTCACAATATTTTTGGTCTCATTGGCCCCAATGCAGGGCTTGGCCTTGCCATAGGCATGGTGGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000381608.8
ENST00000437980.3
ENST00000440926.3
ENST00000519026.5
CDS CCA 90 bp CTTCATCTTGGAGCCCATGTTGGTGTGAGGCACTCAGTGAGGTATTaGCAGCTGTTAGCAAGACAGCAGGGACACTGTTCTCTGAACGTG +
Preference number: 5 (lower is better)
Translates to: LHLGAHVGVRHSVRY*QLLARQQGHCSLNV
Trigger: CACGTTCAGAGAACAGTGTCCCTGCTGTCTTGCTAACAGCTGCCAATACCTCACTGAGTGCCTCACACCAACATGGGCTCCAAGATGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437980.3
ENST00000440926.3
CDS CCA 90 bp AACTCACTTGGAGCCCATGTTGGTGTGAGGCACTCAGTGAGGTATTaGCAGCTGTTAGCAAGACAGCAGGGACACTGTTCTCTGAACGTG +
Preference number: 5 (lower is better)
Translates to: NSLGAHVGVRHSVRY*QLLARQQGHCSLNV
Trigger: CACGTTCAGAGAACAGTGTCCCTGCTGTCTTGCTAACAGCTGCCAATACCTCACTGAGTGCCTCACACCAACATGGGCTCCAAGTGAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519026.5
CDS-3UTR CAA 90 bp GGTGCATCACTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAACAGTAAACAGCATGTaGTCCAGGAGCAAAGCGACG +
Preference number: 5 (lower is better)
Translates to: GASLCLPIKDGPLRHQGITVNSM*SRSKAT
Trigger: CGTCGCTTTGCTCCTGGACAACATGCTGTTTACTGT...TATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAGTGATGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp ACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGAACCCGTCACAGCTCGCCACGGTGTTGTTGTaGAAGAAGGAGAAGATGGTG +
Preference number: 5 (lower is better)
Translates to: THYHLYAMSHPLQNPSQLATVLL*KKEKMV
Trigger: CACCATCTTCTCCTTCTTCAACAACAACACCGTGGC...GAGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp GGTGCATCACTCTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGCCACGGTGTTGTTGTaGAAGAAGGAGAAGATGGTG +
Preference number: 5 (lower is better)
Translates to: GASLCLPIKDGPLRHQGIATVLL*KKEKMV
Trigger: CACCATCTTCTCCTTCTTCAACAACAACACCGTGGC...TATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAGAGTGATGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp CTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTAGGGCCCACGAATGGGTaGACCAGAAGTTGCATCACA +
Preference number: 5 (lower is better)
Translates to: LRHQGIEEELQVTQVRRVGPTNG*TRSCIT
Trigger: TGTGATGCAACTTCTGGTCAACCCATTCGTGGGCCC...TACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp TCAGGGGCACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGAAGGGCCCACGAATGGGTaGACCAGAAGTTGCATCACA +
Preference number: 5 (lower is better)
Translates to: SGAHYSLPPLCNESPLAEGPTNG*TRSCIT
Trigger: TGTGATGCAACTTCTGGTCAACCCATTCGTGGGCCC...TTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTGCCCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp GCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGCCACCGACCCATCTaGTTGGCCAACACACCAAAG +
Preference number: 5 (lower is better)
Translates to: AAPRHRGRATSYTGEKSISHRPI*LANTPK
Trigger: CTTTGGTGTGTTGGCCAACAAGATGGGTCGGTGGCT...GATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp GGAAAACCCGGGAAAGAACACGTTGAGGAAAAGAGGGTAACACTCTTCCGATCTTCGTGGGCTTCTGGGTaGCATACATCCGGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: GKPGKEHVEEKRVTLFRSSWASG*HTSGSP
Trigger: TGGAGACCCGGATGTATGCAACCCAGAAGCCCACGA...AGATCGGAAGAGTGTTACCCTCTTTTCCTCAACGTGTTCTTTCCCGGGTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp TCAAGTTTAATCAACCTCACAGCAGCGGGAAGGTGCATCACTCTGTCTTCCCATGCAATGAGTCACCCCTaGCAGAACCCGTCACAGCTC +
Preference number: 5 (lower is better)
Translates to: SSLINLTAAGRCITLSSHAMSHP*QNPSQL
Trigger: GAGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGC...ATGGGAAGACAGAGTGATGCACCTTCCCGCTGCTGTGAGGTTGATTAAACTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp CTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTGCACTCAGTGAGGTATaGGCAGCTGTTAGCAAGACA +
Preference number: 5 (lower is better)
Translates to: LSSHKRWATAAPRHRGRAALSEV*AAVSKT
Trigger: TGTCTTGCTAACAGCTGCCAATACCTCACTGAGTGC...AGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS CCA 90 bp CTGTGCCTTGCAAGCAGTTGTTTTTATGAGCTGAGATGGCTTCAGTaGCTGGAGGTGGGATGGTGCTGGCAGTGTCATTCATCCATGCTA +
Preference number: 5 (lower is better)
Translates to: LCLASSCFYELRWLQ*LEVGWCWQCHSSML
Trigger: TAGCATGGATGAATGACACTGCCAGCACCATCCCACCTCCAGCCACTGAAGCCATCTCAGCTCATAAAAACAACTGCTTGCAAGGCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000381608.8
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
ENST00000522513.5
CDS-3UTR CAA 90 bp CTTGTCAGTCACCCCACTGGTTTCAGGGGCACATTACTCACTACCACCTCTATGGCCACGGTGTTGTTGTaGAAGAAGGAGAAGATGGTG +
Preference number: 5 (lower is better)
Translates to: LVSHPTGFRGTLLTTTSMATVLL*KKEKMV
Trigger: CACCATCTTCTCCTTCTTCAACAACAACACCGTGGC...CATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCAGTGGGGTGACTGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp CTGTCTTCCCATAAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAGCCACGGTGTTGTaGTTGAAGAAGGAGAAGATG +
Preference number: 5 (lower is better)
Translates to: LSSHKRWATAAPRHRGRATATVL*LKKEKM
Trigger: CATCTTCTCCTTCTTCAACAACAACACCGTGGCTGT...AGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTTATGGGAAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp AGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTTCAACAGCCACGGTGTaGTTGTTGAAGAAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: RWATAAPRHRGRATSYTGSTATV*LLKKEK
Trigger: CTTCTCCTTCTTCAACAACAACACCGTGGCTGTTGA...ACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp GAACACGTTGAGGAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAAGCCACCGACCCATCTaGTTGGCCAACACACCAAAG +
Preference number: 5 (lower is better)
Translates to: EHVEEKRVTLFRSVGTMPSHRPI*LANTPK
Trigger: CTTTGGTGTGTTGGCCAACAAGATGGGTCGGTGGCT...TGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTCCTCAACGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp AGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATTCGTGGGCTTCTGGGTaGCATACATCCGGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: RGRATSYTGEKSIRDSVHSWASG*HTSGSP
Trigger: TGGAGACCCGGATGTATGCAACCCAGAAGCCCACGA...ATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp CTTGTCAGTCACCCCACTGGTTTCAGGGGCACATTACTCACTACCACCTCTATGGCACTCAGTGAGGTATaGGCAGCTGTTAGCAAGACA +
Preference number: 5 (lower is better)
Translates to: LVSHPTGFRGTLLTTTSMALSEV*AAVSKT
Trigger: TGTCTTGCTAACAGCTGCCAATACCTCACTGAGTGC...CATAGAGGTGGTAGTGAGTAATGTGCCCCTGAAACCAGTGGGGTGACTGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp AAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACACCCACGCTTTTCAACTaGCCAGCTTATCCTCTACCA +
Preference number: 5 (lower is better)
Translates to: KRWATAAPRHRGRATSYTPTLFN*PAYPLP
Trigger: TGGTAGAGGATAAGCTGGCAAGTTGAAAAGCGTGGG...TGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS-3UTR CAA 90 bp GGAAAGAAGATTCCCAGGCAGAGGTATGTGAAGCCCACTGAGCCGTGGGCTCAGGAAGAGTTGACTTCTTaGAACTCCATGTCATATAGG +
Preference number: 5 (lower is better)
Translates to: GKKIPRQRYVKPTEPWAQEELTS*NSMSYR
Trigger: CCTATATGACATGGAGTTCAAAGAAGTCAACTCTTC...CTGAGCCCACGGCTCAGTGGGCTTCACATACCTCTGCCTGGGAATCTTCTTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp GCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCGCCACGGTGTTGTTGTaGAAGAAGGAGAAGATGGTG +
Preference number: 5 (lower is better)
Translates to: AAPRHRGRATSYTGEKSIATVLL*KKEKMV
Trigger: CACCATCTTCTCCTTCTTCAACAACAACACCGTGGC...GATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp CTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGTCAACAGCCACGGTGTaGTTGTTGAAGAAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: LQVTQVRRVSGTVSMGGESTATV*LLKKEK
Trigger: CTTCTCCTTCTTCAACAACAACACCGTGGCTGTTGA...CTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp GTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAGAGGGGAGTCCCCTaGGCACTCTCAGGAGAGACT +
Preference number: 5 (lower is better)
Translates to: VTLFRSVGTMPEKIRQQIKRGVP*ALSGET
Trigger: AGTCTCTCCTGAGAGTGCCAAGGGGACTCCCCTCTT...AATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp CACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAAGAGGGGAGTCCCCTaGGCACTCTCAGGAGAGACT +
Preference number: 5 (lower is better)
Translates to: HSSDLLGLCQRKSGNRLKKRGVP*ALSGET
Trigger: AGTCTCTCCTGAGAGTGCCAAGGGGACTCCCCTCTT...CTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp ATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCCACCGACCCATCTTGTaGGCCAACACACCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: IEEELQVTQVRRVSGTVSHRPIL*ANTPKR
Trigger: CCTCTTTGGTGTGTTGGCCAACAAGATGGGTCGGTG...GGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp TCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTTCGTGGGCTTCTGGGTaGCATACATCCGGGTCTCCA +
Preference number: 5 (lower is better)
Translates to: SDLLGLCQRKSGNRLKRLSWASG*HTSGSP
Trigger: TGGAGACCCGGATGTATGCAACCCAGAAGCCCACGA...AAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp CAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATGGGAGGGGAGGAAAGCACGCTCATTCTTTaGTTTGAGCTACAAACCCCT +
Preference number: 5 (lower is better)
Translates to: QVTQVRRVSGTVSMGGEESTLIL*FELQTP
Trigger: AGGGGTTTGTAGCTCAAACAAAAGAATGAGCGTGCT...TTCCTCCCCTCCCATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS-3UTR CAA 90 bp ATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTGGACAGTAAACAGCATGTaGTCCAGGAGCAAAGCGACG +
Preference number: 5 (lower is better)
Translates to: MPEKIRQQIKEACQSPHWTVNSM*SRSKAT
Trigger: CGTCGCTTTGCTCCTGGACAACATGCTGTTTACTGT...CCAGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp CACATTACTCACTACCACCTCTATGCAATGAGTCACCCCTTGCAGAACCCGTCAACAGCCACGGTGTTGTaGTTGAAGAAGGAGAAGATG +
Preference number: 5 (lower is better)
Translates to: HITHYHLYAMSHPLQNPSTATVL*LKKEKM
Trigger: CATCTTCTCCTTCTTCAACAACAACACCGTGGCTGT...TGACGGGTTCTGCAAGGGGTGACTCATTGCATAGAGGTGGTAGTGAGTAATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp GCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCTCAACAGCCACGGTGTaGTTGTTGAAGAAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: AAPRHRGRATSYTGEKSISTATV*LLKKEK
Trigger: CTTCTCCTTCTTCAACAACAACACCGTGGCTGTTGA...GATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp ACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGGCAGTTTCTTCACCGACCCATCTTGTaGGCCAACACACCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: TPLLLGNLQSGGISRQFLHRPIL*ANTPKR
Trigger: CCTCTTTGGTGTGTTGGCCAACAAGATGGGTCGGTG...AAGAAACTGCCTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp GCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCCGCTCATTCTTTTGTTaGAGCTACAAACCCCTGATC +
Preference number: 5 (lower is better)
Translates to: AAPRHRGRATSYTGEKSIRSFFC*SYKPLI
Trigger: GATCAGGGGTTTGTAGCTCAAACAAAAGAATGAGCG...GATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS-3UTR CAA 90 bp GCAATGAGTCACCCCTTGCAGAACCCGTCACAGCTCAAGTTTAATCAACCTCACAGCACGCTCATTCTTTaGTTTGAGCTACAAACCCCT +
Preference number: 5 (lower is better)
Translates to: AMSHPLQNPSQLKFNQPHSTLIL*FELQTP
Trigger: AGGGGTTTGTAGCTCAAACAAAAGAATGAGCGTGCT...GTGAGGTTGATTAAACTTGAGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS-3UTR CAA 90 bp AGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATACAGTAAACAGCATGTaGTCCAGGAGCAAAGCGACG +
Preference number: 5 (lower is better)
Translates to: RGRATSYTGEKSIRDSVHTVNSM*SRSKAT
Trigger: CGTCGCTTTGCTCCTGGACAACATGCTGTTTACTGT...ATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp AGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAAGAGTTGACTTCTTaGAACTCCATGTCATATAGG +
Preference number: 5 (lower is better)
Translates to: RWATAAPRHRGRATSYTGEELTS*NSMSYR
Trigger: CCTATATGACATGGAGTTCAAAGAAGTCAACTCTTC...ACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp GGAAAACCCGGGAAAGAACACGTTGAGGAAAAGAGGGTAACACTCTTCCGATCTACAGCCACGGTGTTGTaGTTGAAGAAGGAGAAGATG +
Preference number: 5 (lower is better)
Translates to: GKPGKEHVEEKRVTLFRSTATVL*LKKEKM
Trigger: CATCTTCTCCTTCTTCAACAACAACACCGTGGCTGT...AGATCGGAAGAGTGTTACCCTCTTTTCCTCAACGTGTTCTTTCCCGGGTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp GGAAAACCCGGGAAAGAACACGTTGAGGAAAAGAGGGTAACACTCTTCCGATCTTCAACAGCCACGGTGTaGTTGTTGAAGAAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: GKPGKEHVEEKRVTLFRSSTATV*LLKKEK
Trigger: CTTCTCCTTCTTCAACAACAACACCGTGGCTGTTGA...AGATCGGAAGAGTGTTACCCTCTTTTCCTCAACGTGTTCTTTCCCGGGTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp TGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCCACTGGTTCAACAGCCACGGTGTaGTTGTTGAAGAAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: CQRKSGNRLKRLVSHPTGSTATV*LLKKEK
Trigger: CTTCTCCTTCTTCAACAACAACACCGTGGCTGTTGA...ACCAGTGGGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp GAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATCACTCACTGGGCCCACGAATGGGTaGACCAGAAGTTGCATCACA +
Preference number: 5 (lower is better)
Translates to: EGKALLAALDLATEKSLTGPTNG*TRSCIT
Trigger: TGTGATGCAACTTCTGGTCAACCCATTCGTGGGCCC...AGTGAGTGATTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp ATGTCACATTACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGCACCGACCCATCTTGTaGGCCAACACACCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: MSHYTPPVRKSTIRRDFKHRPIL*ANTPKR
Trigger: CCTCTTTGGTGTGTTGGCCAACAAGATGGGTCGGTG...CTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTAATGTGACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp TTCACTGAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATCAGCAATGAGTCACCCCTaGCAGAACCCGTCACAGCTC +
Preference number: 5 (lower is better)
Translates to: FTEGKALLAALDLATEKSAMSHP*QNPSQL
Trigger: GAGCTGTGACGGGTTCTGCAAGGGGTGACTCATTGC...TGATTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTCAGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp AAAAGATGGGCCACTGCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAAACGTGGATGTGCTGTaGGATTTATTGCCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: KRWATAAPRHRGRATSYTNVDVL*DLLPPV
Trigger: AACAGGAGGCAATAAATCCAACAGCACATCCACGTT...TGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGCAGTGGCCCATCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000437980.3
ENST00000440926.3
CDS-3UTR CAA 90 bp ATGGTCAGGCTCCTCATCACTGTCCTCCCCCAGAGGAAATTCCTTCGTGGGCTTCTTCATGGAATAAAGTaGCCTCTGTTTTCCATTATG +
Preference number: 5 (lower is better)
Translates to: MVRLLITVLPQRKFLRGLLHGIK*PLFSIM
Trigger: CATAATGGAAAACAGAGGCAACTTTATTCCATGAAG...AAGCCCACGAAGGAATTTCCTCTGGGGGAGGACAGTGATGAGGAGCCTGACCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517776.5
CDS GCA 90 bp TCCCACGCTTTTCAACTTGCCAGCTTATCCTCTACCATGTTCCCTTaGTCTGTGGTTCTAGAAGCACGCTCATTCTTTTGTTTGAGCTAC +
Preference number: 5 (lower is better)
Translates to: SHAFQLASLSSTMFP*SVVLEARSFFCLSY
Trigger: GTAGCTCAAACAAAAGAATGAGCGTGCTTCTAGAACCACAGAGCAAGGGAACATGGTAGAGGATAAGCTGGCAAGTTGAAAAGCGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS-3UTR CAA 90 bp GAACACGTTGAGGAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCACGCTCATTCTTTTGTTaGAGCTACAAACCCCTGATC +
Preference number: 5 (lower is better)
Translates to: EHVEEKRVTLFRSVGTMPRSFFC*SYKPLI
Trigger: GATCAGGGGTTTGTAGCTCAAACAAAAGAATGAGCG...TGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTCCTCAACGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS-3UTR CAA 90 bp TTCACTGAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATCAGGGCCCACGAATGGGTaGACCAGAAGTTGCATCACA +
Preference number: 5 (lower is better)
Translates to: FTEGKALLAALDLATEKSGPTNG*TRSCIT
Trigger: TGTGATGCAACTTCTGGTCAACCCATTCGTGGGCCC...TGATTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTCAGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp CTTTTCACTGAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAACACCGACCCATCTTGTaGGCCAACACACCAAAGAGG +
Preference number: 5 (lower is better)
Translates to: LFTEGKALLAALDLATEKHRPIL*ANTPKR
Trigger: CCTCTTTGGTGTGTTGGCCAACAAGATGGGTCGGTG...TTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTCAGTGAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp TCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGCACTCAGTGAGGTATaGGCAGCTGTTAGCAAGACA +
Preference number: 5 (lower is better)
Translates to: SDLLGLCQRKSGNRLKRLALSEV*AAVSKT
Trigger: TGTCTTGCTAACAGCTGCCAATACCTCACTGAGTGC...AAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp ACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCAAGGCAGTTTCTTGCACTCAGTGAGGTATaGGCAGCTGTTAGCAAGACA +
Preference number: 5 (lower is better)
Translates to: TPLLLGNLQSGGISRQFLALSEV*AAVSKT
Trigger: TGTCTTGCTAACAGCTGCCAATACCTCACTGAGTGC...AAGAAACTGCCTTGAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp GCGGCACCAAGGCATAGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCGAAGAGTTGACTTCTTaGAACTCCATGTCATATAGG +
Preference number: 5 (lower is better)
Translates to: AAPRHRGRATSYTGEKSIEELTS*NSMSYR
Trigger: CCTATATGACATGGAGTTCAAAGAAGTCAACTCTTC...GATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCTATGCCTTGGTGCCGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
CDS-3UTR CAA 90 bp CTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGACAGCCACGGTGTTGTaGTTGAAGAAGGAGAAGATG +
Preference number: 5 (lower is better)
Translates to: LFRSVGTMPEKIRQQIKETATVL*LKKEKM
Trigger: CATCTTCTCCTTCTTCAACAACAACACCGTGGCTGT...CTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp CTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGTCAACAGCCACGGTGTaGTTGTTGAAGAAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: LFRSVGTMPEKIRQQIKESTATV*LLKKEK
Trigger: CTTCTCCTTCTTCAACAACAACACCGTGGCTGTTGA...CTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp AGAGGAAGAGCTACAAGTTACACAGGTGAGAAGAGTATCAGGGACAGTGTCCATAACGTGGATGTGCTGTaGGATTTATTGCCTCCTGTT +
Preference number: 5 (lower is better)
Translates to: RGRATSYTGEKSIRDSVHNVDVL*DLLPPV
Trigger: AACAGGAGGCAATAAATCCAACAGCACATCCACGTT...ATGGACACTGTCCCTGATACTCTTCTCACCTGTGTAACTTGTAGCTCTTCCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437980.3
ENST00000440926.3
CDS-3UTR CAA 90 bp TTCACTGAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATCACCCACGCTTTTCAACTaGCCAGCTTATCCTCTACCA +
Preference number: 5 (lower is better)
Translates to: FTEGKALLAALDLATEKSPTLFN*PAYPLP
Trigger: TGGTAGAGGATAAGCTGGCAAGTTGAAAAGCGTGGG...TGATTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTCAGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS-3UTR CAA 90 bp GGGACTATGCCAGAGAAAATCAGGCAACAGATTAAAGAGGCTTGTCAGTCACCCGAAGAGTTGACTTCTTaGAACTCCATGTCATATAGG +
Preference number: 5 (lower is better)
Translates to: GTMPEKIRQQIKEACQSPEELTS*NSMSYR
Trigger: CCTATATGACATGGAGTTCAAAGAAGTCAACTCTTC...GGGTGACTGACAAGCCTCTTTAATCTGTTGCCTGATTTTCTCTGGCATAGTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp GAGGGTAAAGCCCTTTTAGCAGCTCTAGATTTAGCCACAGAAAAATCACTCACTACAGCCACGGTGTTGTaGTTGAAGAAGGAGAAGATG +
Preference number: 5 (lower is better)
Translates to: EGKALLAALDLATEKSLTTATVL*LKKEKM
Trigger: CATCTTCTCCTTCTTCAACAACAACACCGTGGCTGT...AGTGAGTGATTTTTCTGTGGCTAAATCTAGAGCTGCTAAAAGGGCTTTACCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS CCA 90 bp CTAATAAATGTCCATGAAATCTTCATGATTTATGTTCTTCTGTCATaGCTTCAGCAGGTCCTTCCATTCAGGGTCCCTGACTTCCCGCAA +
Preference number: 5 (lower is better)
Translates to: LINVHEIFMIYVLLS*LQQVLPFRVPDFPQ
Trigger: TTGCGGGAAGTCAGGGACCCTGAATGGAAGGACCTGCTGAAGCCATGACAGAAGAACATAAATCATGAAGATTTCATGGACATTTATTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524272.1
CDS-3UTR CAA 90 bp GGAAAAGAGGGTAACACTCTTCCGATCTGTTGGGACTATGCCAGAGAAAATCAGGAAGAGTTGACTTCTTaGAACTCCATGTCATATAGG +
Preference number: 5 (lower is better)
Translates to: GKEGNTLPICWDYARENQEELTS*NSMSYR
Trigger: CCTATATGACATGGAGTTCAAAGAAGTCAACTCTTC...CTGATTTTCTCTGGCATAGTCCCAACAGATCGGAAGAGTGTTACCCTCTTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp TCTTCTACTTTTATTTCTAAGAGTCTAAGAGGTTCAGAAAAGGTAGGAACACACACAGTAAACAGCATGTaGTCCAGGAGCAAAGCGACG +
Preference number: 5 (lower is better)
Translates to: SSTFISKSLRGSEKVGTHTVNSM*SRSKAT
Trigger: CGTCGCTTTGCTCCTGGACAACATGCTGTTTACTGT...GTGTGTTCCTACCTTTTCTGAACCTCTTAGACTCTTAGAAATAAAAGTAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp ACAATGTCACATTACACCCCTCCTGTTAGGAAATCTACAATCAGGAGGGATTTCGAAGAGTTGACTTCTTaGAACTCCATGTCATATAGG +
Preference number: 5 (lower is better)
Translates to: TMSHYTPPVRKSTIRRDFEELTS*NSMSYR
Trigger: CCTATATGACATGGAGTTCAAAGAAGTCAACTCTTC...GAAATCCCTCCTGATTGTAGATTTCCTAACAGGAGGGGTGTAATGTGACATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
CDS-3UTR CAA 90 bp TCTTCTACTTTTATTTCTAAGAGTCTAAGAGGTTCAGAAAAGGTAGGAACACACCGCTCATTCTTTTGTTaGAGCTACAAACCCCTGATC +
Preference number: 5 (lower is better)
Translates to: SSTFISKSLRGSEKVGTHRSFFC*SYKPLI
Trigger: GATCAGGGGTTTGTAGCTCAAACAAAAGAATGAGCG...GTGTGTTCCTACCTTTTCTGAACCTCTTAGACTCTTAGAAATAAAAGTAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS CCA 72 bp GCAGGAGAGGCGAGGGCATGTGGGGAACTTCCGGCATaGCCGAGGTGCAGAGAAGAGTTGACTTCTTTGAAC +
Preference number: 6 (lower is better)
Translates to: AGEARACGELPA*PRCREELTSLN
Trigger: GTTCAAAGAAGTCAACTCTTCTCTGCACCTCGGCCATGCCGGAAGTTCCCCACATGCCCTCGCCTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000381608.8
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
ENST00000522513.5
CDS TCA 72 bp GCAGTCTTCCCCTGCGGGCTCTTAGGGAAGGTCCTGTaGCAGCTACAGGTCTCCTGCAGCCTTTATGGAAGA +
Preference number: 6 (lower is better)
Translates to: AVFPCGLLGKVL*QLQVSCSLYGR
Trigger: TCTTCCATAAAGGCTGCAGGAGACCTGTAGCTGTCACAGGACCTTCCCTAAGAGCCCGCAGGGGAAGACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
ENST00000522513.5
CDS GCA 72 bp GCGAGGGCATGTGGGGAACTTCCGGCATGGCCGAGGTaGAGAGAAGAGTTGACTTCTTTGAACTCCATGTCA +
Preference number: 6 (lower is better)
Translates to: ARACGELPAWPR*REELTSLNSMS
Trigger: TGACATGGAGTTCAAAGAAGTCAACTCTTCTCTGCACCTCGGCCATGCCGGAAGTTCCCCACATGCCCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000381608.8
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
ENST00000522513.5
CDS CCA 72 bp GGAGCCCATGTTGGTGTGAGGCACTCAGTGAGGTATTaGCAGCTGTTAGCAAGACAGCAGGGACACTGTTCT +
Preference number: 6 (lower is better)
Translates to: GAHVGVRHSVRY*QLLARQQGHCS
Trigger: AGAACAGTGTCCCTGCTGTCTTGCTAACAGCTGCCAATACCTCACTGAGTGCCTCACACCAACATGGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000437980.3
ENST00000440926.3
ENST00000519026.5
CDS CAA 72 bp GTGGGCACAATTGGCACCACCACAGTAAACAGCATGTaGTCCAGGAGCAAAGCGACGAATACCACCACCAGC +
Preference number: 6 (lower is better)
Translates to: VGTIGTTTVNSM*SRSKATNTTTS
Trigger: GCTGGTGGTGGTATTCGTCGCTTTGCTCCTGGACAACATGCTGTTTACTGTGGTGGTGCCAATTGTGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000381608.8
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
ENST00000522513.5
CDS CAA 90 bp CCTTCATCTTGGAGCCCATGTTGGTGTGAGGCACTCAGTGAGGTATaGGCAGCTGTTAGCAAGACAGCAGGGACACTGTTCTCTGAACGT +
Preference number: 6 (lower is better)
Translates to: PSSWSPCWCEALSEV*AAVSKTAGTLFSER
Trigger: ACGTTCAGAGAACAGTGTCCCTGCTGTCTTGCTAACAGCTGCCAATACCTCACTGAGTGCCTCACACCAACATGGGCTCCAAGATGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437980.3
ENST00000440926.3
CDS CAA 90 bp AAACTCACTTGGAGCCCATGTTGGTGTGAGGCACTCAGTGAGGTATaGGCAGCTGTTAGCAAGACAGCAGGGACACTGTTCTCTGAACGT +
Preference number: 6 (lower is better)
Translates to: KLTWSPCWCEALSEV*AAVSKTAGTLFSER
Trigger: ACGTTCAGAGAACAGTGTCCCTGCTGTCTTGCTAACAGCTGCCAATACCTCACTGAGTGCCTCACACCAACATGGGCTCCAAGTGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519026.5
CDS TCA 72 bp CACGAATGGGTTGACCAGAAGTTGCATCACAGCCTTTaGAGCAAACAGAACCCCGACCCGGGTAATCTCTTC +
Preference number: 6 (lower is better)
Translates to: HEWVDQKLHHSL*SKQNPDPGNLF
Trigger: GAAGAGATTACCCGGGTCGGGGTTCTGTTTGCTTCAAAGGCTGTGATGCAACTTCTGGTCAACCCATTCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000381608.8
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
ENST00000522513.5
CDS TCA 72 bp TCTTGTTGGCCAACACACCAAAGAGGTTGGTGCCAATaGGGTAGGACACACTGGCAGGCAAGAAAGCTAGAC +
Preference number: 6 (lower is better)
Translates to: SCWPTHQRGWCQ*GRTHWQARKLD
Trigger: GTCTAGCTTTCTTGCCTGCCAGTGTGTCCTACCTCATTGGCACCAACCTCTTTGGTGTGTTGGCCAACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000381608.8
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
ENST00000519171.1
CDS TCA 72 bp TGCCTATGGCAAGGCCAAGCCCTGCATTGGGGCCAATaGGACCAAAAATATTGTGAGCCAGAGGAACACAGA +
Preference number: 6 (lower is better)
Translates to: CLWQGQALHWGQ*DQKYCEPEEHR
Trigger: TCTGTGTTCCTCTGGCTCACAATATTTTTGGTCTCATTGGCCCCAATGCAGGGCTTGGCCTTGCCATAGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000381608.8
ENST00000437980.3
ENST00000440926.3
ENST00000519026.5
CDS GCA 72 bp TGGAGGTGGGATGGTGCTGGCAGTGTCATTCATCCATaGTATTCCACTAGGTACGCTTTCTTCAACAGCCAC +
Preference number: 6 (lower is better)
Translates to: WRWDGAGSVIHP*YSTRYAFFNSH
Trigger: GTGGCTGTTGAAGAAAGCGTACCTAGTGGAATAGCATGGATGAATGACACTGCCAGCACCATCCCACCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000381608.8
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
ENST00000522513.5
CDS GCA 72 bp TATGATCTGGGGACCTTTGTGCAAACCCACAGTAGTTaGCATAGGACCCCCACACCTCTCCTTTCTTCAGGA +
Preference number: 6 (lower is better)
Translates to: YDLGTFVQTHSS*HRTPTPLLSSG
Trigger: TCCTGAAGAAAGGAGAGGTGTGGGGGTCCTATGGCAACTACTGTGGGTTTGCACAAAGGTCCCCAGATCATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000519171.1
CDS CCA 72 bp GCAAGCAGTTGTTTTTATGAGCTGAGATGGCTTCAGTaGCTGGAGGTGGGATGGTGCTGGCAGTGTCATTCA +
Preference number: 6 (lower is better)
Translates to: ASSCFYELRWLQ*LEVGWCWQCHS
Trigger: TGAATGACACTGCCAGCACCATCCCACCTCCAGCCACTGAAGCCATCTCAGCTCATAAAAACAACTGCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000381608.8
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
ENST00000522513.5
CDS CCA 72 bp GGTAGGACACACTGGCAGGCAAGAAAGCTAGACCTGTaGAAGGACACAGATCCTTACCTTAGGACATGTCCA +
Preference number: 6 (lower is better)
Translates to: GRTHWQARKLDL*KDTDPYLRTCP
Trigger: TGGACATGTCCTAAGGTAAGGATCTGTGTCCTTCCACAGGTCTAGCTTTCTTGCCTGCCAGTGTGTCCTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519171.1
CDS CAA 90 bp CATGCTATTCCACTAGGTACGCTTTCTTCAACAGCCACGGTGTTGTaGTTGAAGAAGGAGAAGATGGTGGAAAAGGCAGGAGAGGCGAGG +
Preference number: 6 (lower is better)
Translates to: HAIPLGTLSSTATVL*LKKEKMVEKAGEAR
Trigger: CCTCGCCTCTCCTGCCTTTTCCACCATCTTCTCCTTCTTCAACAACAACACCGTGGCTGTTGAAGAAAGCGTACCTAGTGGAATAGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000381608.8
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
ENST00000522513.5
CDS CAA 72 bp TATCCAATCCTGTTGGTGAGAGGGCCCACGAATGGGTaGACCAGAAGTTGCATCACAGCCTTTGAAGCAAAC +
Preference number: 6 (lower is better)
Translates to: YPILLVRGPTNG*TRSCITAFEAN
Trigger: GTTTGCTTCAAAGGCTGTGATGCAACTTCTGGTCAACCCATTCGTGGGCCCTCTCACCAACAGGATTGGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000265808.11
ENST00000276373.10
ENST00000381608.8
ENST00000437980.3
ENST00000440926.3
ENST00000517776.5
ENST00000519026.5
ENST00000522513.5
CDS CAA 72 bp CCCTTGCTCTGTGGTTCTAGAAGCACGCTCATTCTTTaGTTTGAGCTACAAACCCCTGATCAGAAAGATGCC +
Preference number: 6 (lower is better)
Translates to: PLLCGSRSTLIL*FELQTPDQKDA
Trigger: GGCATCTTTCTGATCAGGGGTTTGTAGCTCAAACAAAAGAATGAGCGTGCTTCTAGAACCACAGAGCAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS CAA 90 bp ATCCCACGCTTTTCAACTTGCCAGCTTATCCTCTACCATGTTCCCTaGCTCTGTGGTTCTAGAAGCACGCTCATTCTTTTGTTTGAGCTA +
Preference number: 6 (lower is better)
Translates to: IPRFSTCQLILYHVP*LCGSRSTLILLFEL
Trigger: TAGCTCAAACAAAAGAATGAGCGTGCTTCTAGAACCACAGAGCAAGGGAACATGGTAGAGGATAAGCTGGCAAGTTGAAAAGCGTGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS CCA 72 bp GGAGATTTGTTTGGGGTTGCACAGTTAGTGTCAAACTaGGATGAAATCCCACGCTTTTCAACTTGCCAGCTT +
Preference number: 6 (lower is better)
Translates to: GDLFGVAQLVSN*DEIPRFSTCQL
Trigger: AAGCTGGCAAGTTGAAAAGCGTGGGATTTCATCCCAGTTTGACACTAACTGTGCAACCCCAAACAAATCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS CCA 72 bp GTCCATGAAATCTTCATGATTTATGTTCTTCTGTCATaGCTTCAGCAGGTCCTTCCATTCAGGGTCCCTGAC +
Preference number: 6 (lower is better)
Translates to: VHEIFMIYVLLS*LQQVLPFRVPD
Trigger: GTCAGGGACCCTGAATGGAAGGACCTGCTGAAGCCATGACAGAAGAACATAAATCATGAAGATTTCATGGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524272.1
CDS CAA 90 bp TACCATGTTCCCTTGCTCTGTGGTTCTAGAAGCACGCTCATTCTTTaGTTTGAGCTACAAACCCCTGATCAGAAAGATGCCTTCATCTTG +
Preference number: 6 (lower is better)
Translates to: YHVPLLCGSRSTLIL*FELQTPDQKDAFIL
Trigger: CAAGATGAAGGCATCTTTCTGATCAGGGGTTTGTAGCTCAAACAAAAGAATGAGCGTGCTTCTAGAACCACAGAGCAAGGGAACATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS TCA 72 bp TTTGTTTGGGGTTGCACAGTTAGTGTCAAACTGGGATaGAATCCCACGCTTTTCAACTTGCCAGCTTATCCT +
Preference number: 6 (lower is better)
Translates to: FVWGCTVSVKLG*NPTLFNLPAYP
Trigger: AGGATAAGCTGGCAAGTTGAAAAGCGTGGGATTTCATCCCAGTTTGACACTAACTGTGCAACCCCAAACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS GCA 72 bp TTTCAACTTGCCAGCTTATCCTCTACCATGTTCCCTTaGTCTGTGGTTCTAGAAGCACGCTCATTCTTTTGT +
Preference number: 6 (lower is better)
Translates to: FQLASLSSTMFP*SVVLEARSFFC
Trigger: ACAAAAGAATGAGCGTGCTTCTAGAACCACAGAGCAAGGGAACATGGTAGAGGATAAGCTGGCAAGTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS CAA 72 bp TGCTCTGTGGTTCTAGAAGCACGCTCATTCTTTTGTTaGAGCTACAAACCCCTGATCAGAAAGATGCCTTCA +
Preference number: 6 (lower is better)
Translates to: CSVVLEARSFFC*SYKPLIRKMPS
Trigger: TGAAGGCATCTTTCTGATCAGGGGTTTGTAGCTCAAACAAAAGAATGAGCGTGCTTCTAGAACCACAGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS CAA 72 bp TTTTCAACTTGCCAGCTTATCCTCTACCATGTTCCCTaGCTCTGTGGTTCTAGAAGCACGCTCATTCTTTTG +
Preference number: 6 (lower is better)
Translates to: FSTCQLILYHVP*LCGSRSTLILL
Trigger: CAAAAGAATGAGCGTGCTTCTAGAACCACAGAGCAAGGGAACATGGTAGAGGATAAGCTGGCAAGTTGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265808.11
ENST00000437980.3
ENST00000440926.3
CDS GCA 72 bp ATCCTTACCTTAGGACATGTCCAATTTACTCTAAAATaGCTTGTCTCGTACAAGACACTGAAGTCCACCCCT +
Preference number: 6 (lower is better)
Translates to: ILTLGHVQFTLK*LVSYKTLKSTP
Trigger: AGGGGTGGACTTCAGTGTCTTGTACGAGACAAGGCATTTTAGAGTAAATTGGACATGTCCTAAGGTAAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519171.1
CDS CAA 90 bp AATCAGAAGAATTGTAATCCCTTTGCCCATTCATTACAGATGTCTTaGGTTGTGTTTTTAATCTTCTCCCATTACTTCCCGGCAGACATG +
Preference number: 6 (lower is better)
Translates to: NQKNCNPFAHSLQMS*VVFLIFSHYFPADM
Trigger: CATGTCTGCCGGGAAGTAATGGGAGAAGATTAAAAACACAACCAAAGACATCTGTAATGAATGGGCAAAGGGATTACAATTCTTCTGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000524272.1