RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC12A6 (Homo sapiens)

Ensembl gene IDs: ENSG00000140199

Ensembl transcript IDs: ENST00000290209.9, ENST00000354181.8, ENST00000397702.6, ENST00000397707.6, ENST00000458406.6, ENST00000558589.5, ENST00000558667.5, ENST00000558950.1, ENST00000559236.5, ENST00000559441.1, ENST00000559484.1, ENST00000559523.5, ENST00000559664.5, ENST00000560023.1, ENST00000560164.5, ENST00000560611.5, ENST00000561080.5, ENST00000561120.5, ENST00000675289.1, ENST00000676379.1

Found 1891 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATCCGCCTCACATTGGACTGGTCCGGACGCATGTTAAGCAGGTCCTaGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGATGCCATG +
Preference number: 1 (lower is better)
Translates to: IRLTLDWSGRMLSRS*NPSIDFAFCPRDAM
Trigger: CATGGCATCCCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGACCAGTCCAATGTGAGGCGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR CCA 90 bp TGTGTAAATGTGGCAGAATTCCTAGGCAGGCTGACCTTTACAGTATaGGCCTTTAAGATACTGGATCCTGGTTGGGCACAGTGGCTCACG +
Preference number: 1 (lower is better)
Translates to: CVNVAEFLGRLTFTV*AFKILDPGWAQWLT
Trigger: CGTGAGCCACTGTGCCCAACCAGGATCCAGTATCTTAAAGGCCCATACTGTAAAGGTCAGCCTGCCTAGGAATTCTGCCACATTTACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR GCA 90 bp GCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCATCATCAAAGTaGGCTCGTAAGTATATGCTGATATATCACTGTCATGCATCTCCA +
Preference number: 1 (lower is better)
Translates to: AACAGASGTFVPSSK*ARKYMLIYHCHASP
Trigger: TGGAGATGCATGACAGTGATATATCAGCATATACTTACGAGCGCACTTTGATGATGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559664.5
3UTR GCA 90 bp GCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCATCATCAAAGTaGGCTCGTAAGTATATGCTGATATATCACTGTCATGCTCTTGTA +
Preference number: 1 (lower is better)
Translates to: AACAGASGTFVPSSK*ARKYMLIYHCHALV
Trigger: TACAAGAGCATGACAGTGATATATCAGCATATACTTACGAGCGCACTTTGATGATGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561080.5
3UTR TCA 90 bp TCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTaGGTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGT +
Preference number: 1 (lower is better)
Translates to: SSRVQYDVYRTQASS*VGVVVMSWHFHGGR
Trigger: ACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCACTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR GCA 90 bp CCTTCTCCTGATAGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATaGTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTG +
Preference number: 1 (lower is better)
Translates to: PSPDRFLSLRPHQSQ*WSIVALSFGLSPIV
Trigger: CACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCTATCAGGAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR CCA 90 bp TCTCCTGATAGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTaGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCT +
Preference number: 1 (lower is better)
Translates to: SPDRFLSLRPHQSQC*SIVALSFGLSPIVP
Trigger: AGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCTATCAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR GCA 90 bp GACTCTTTTCTCCATGGTGGGGTGACAGGTCCTAGAAGGACAATGTaGATATTACGACAAACACAAAGAAACTATACCATAACCCAAGGC +
Preference number: 1 (lower is better)
Translates to: DSFLHGGVTGPRRTM*ILRQTQRNYTITQG
Trigger: GCCTTGGGTTATGGTATAGTTTCTTTGTGTTTGTCGTAATATGCACATTGTCCTTCTAGGACCTGTCACCCCACCATGGAGAAAAGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354181.8
3UTR CCA 90 bp GATCCTGCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATaGAGTGTTGCAGTGGGAGTTGTAAATAATGCTTCTACCATCTGT +
Preference number: 1 (lower is better)
Translates to: DPAGHDSLLLNSTKQ*SVAVGVVNNASTIC
Trigger: ACAGATGGTAGAAGCATTATTTACAACTCCCACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGCAGGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR GCA 90 bp TTTCTTAGTGGTAAAATTTCTTCAACAGGTCAATGCCAATCTGTATaGCATTTTAGTAAAGTAGGTAAGGAGAGTAGCCGCTCAGTAACG +
Preference number: 1 (lower is better)
Translates to: FLSGKISSTGQCQSV*HFSKVGKESSRSVT
Trigger: CGTTACTGAGCGGCTACTCTCCTTACCTACTTTACTAAAATGGCATACAGATTGGCATTGACCTGTTGAAGAAATTTTACCACTAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
3UTR-3UTR TCA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGGCGGGCGGATCACCTaGGGTTGGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: GGTRIGGILGPQESEATEGGRIT*GWEFET
Trigger: GGTCTCGAACTCCCAACCTCAGGTGATCCGCCCGCC...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR-3UTR TCA 90 bp TTGTTAGCATGTTTAGGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAAGGCGGGCGGATCACCTaGGGTTGGGAGTTCGAGACC +
Preference number: 2 (lower is better)
Translates to: LLACLGGTRIGGILGPQEGGRIT*GWEFET
Trigger: GGTCTCGAACTCCCAACCTCAGGTGATCCGCCCGCC...TTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCCTAAACATGCTAACAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR-3UTR GCA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGCTGGAGTGCAGAGGTaGAATCCTGGCTCACTGCAA +
Preference number: 2 (lower is better)
Translates to: GGTRIGGILGPQESEATEAGVQR*NPGSLQ
Trigger: TTGCAGTGAGCCAGGATTGCACCTCTGCACTCCAGC...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR-3UTR CCA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAAGCCTTCCGTGTTGCTaGGATCACAGGCATGCACCA +
Preference number: 2 (lower is better)
Translates to: GGTRIGGILGPQESEATESLPCC*DHRHAP
Trigger: TGGTGCATGCCTGTGATCCCAGCAACACGGAAGGCT...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR-3UTR CCA 90 bp GGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGAGCCTTCCGTGTTGCTaGGATCACAGGCATGCACCA +
Preference number: 2 (lower is better)
Translates to: GERGLVGSLGHRNLRQRKSLPCC*DHRHAP
Trigger: TGGTGCATGCCTGTGATCCCAGCAACACGGAAGGCT...CTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR-3UTR CCA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAACATCCTCAGTGGGCCTaGAGGTTGAAGCAAGCAAAG +
Preference number: 2 (lower is better)
Translates to: GGTRIGGILGPQESEATEHPQWA*RLKQAK
Trigger: CTTTGCTTGCTTCAACCTCCAGGCCCACTGAGGATG...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR-3UTR TCA 90 bp CCACCCCGGACAAGTAGGACTCGCTCTAGTCCCTCGGTAAGCACCTCTAGGAACGCCTCAATGCGTAAGTaGTATAGGAAGGTGGCTAGG +
Preference number: 2 (lower is better)
Translates to: PPRTSRTRSSPSVSTSRNASMRK*YRKVAR
Trigger: CCTAGCCACCTTCCTATATCACTTACGCATTGAGGC...GTTCCTAGAGGTGCTTACCGAGGGACTAGAGCGAGTCCTACTTGTCCGGGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR GCA 90 bp TCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGTCCCCGCAATCCTGGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: SLGHRNLRQRKIYRVIVPAILAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCCAGGATTGC...GGGGACGATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR-3UTR TCA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAAAGATAGATAGCTATTaGAGGCAGAGGGTCAGCAGG +
Preference number: 2 (lower is better)
Translates to: GGTRIGGILGPQESEATEKIDSY*RQRVSR
Trigger: CCTGCTGACCCTCTGCCTTCAATAGCTATCTATCTT...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR-3UTR TCA 90 bp ATCACTTCACTGCCACCACCCCGGACAAGTAGGACTCGCTCTAGTCCCTCGGTACTGGAATCCTTCCATTaGCTTCGCTTTTTGTCCCCG +
Preference number: 2 (lower is better)
Translates to: ITSLPPPRTSRTRSSPSVLESFH*LRFLSP
Trigger: CGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAG...TACCGAGGGACTAGAGCGAGTCCTACTTGTCCGGGGTGGTGGCAGTGAAGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp TCTCGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGATCAAGAGTTCAGTATaGTGTGTACAGAACACAGGC +
Preference number: 2 (lower is better)
Translates to: SRFTASSTSRVHAILPPQIKSSV*CVQNTG
Trigger: GCCTGTGTTCTGTACACATCATACTGAACTCTTGAT...CTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
3UTR-3UTR GCA 90 bp GGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGACACCTAGGTCAGCTTaGTCCATGTCCTATTTAGTA +
Preference number: 2 (lower is better)
Translates to: GERGLVGSLGHRNLRQRKTPRSA*SMSYLV
Trigger: TACTAAATAGGACATGGAGCAAGCTGACCTAGGTGT...CTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR-3UTR GCA 90 bp CCTTCTCCTGATAGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCATTGGATAGCCGCATGTaGCGGAGCATCTGGGACCTT +
Preference number: 2 (lower is better)
Translates to: PSPDRFLSLRPHQSQCWSLDSRM*RSIWDL
Trigger: AAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAA...TGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCTATCAGGAGAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAACAAATGAATAATTTGTaGCACCTAGGTCAGCTTGCT +
Preference number: 2 (lower is better)
Translates to: GGTRIGGILGPQESEATEQMNNL*HLGQLA
Trigger: AGCAAGCTGACCTAGGTGTCACAAATTATTCATTTG...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR-3UTR GCA 90 bp AGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGTTGGATAGCCGCATGTaGCGGAGCATCTGGGACCTT +
Preference number: 2 (lower is better)
Translates to: RFLSLRPHQSQCWSIVALLDSRM*RSIWDL
Trigger: AAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAA...CAATGCTACGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR CCA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGGCAGAGGTGCAATCCTaGCTCACTGCAACCTCCGCC +
Preference number: 2 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVAEVQS*LTATSA
Trigger: GGCGGAGGTTGCAGTGAGCCAGGATTGCACCTCTGC...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR-3UTR CCA 90 bp ATCACTTCACTGCCACCACCCCGGACAAGTAGGACTCGCTCTAGTCCCTCGGTAATGTTAAGCAGGTCCTaGAATCCTTCCATTGACTTC +
Preference number: 2 (lower is better)
Translates to: ITSLPPPRTSRTRSSPSVMLSRS*NPSIDF
Trigger: GAAGTCAATGGAAGGATTCCAGGACCTGCTTAACAT...TACCGAGGGACTAGAGCGAGTCCTACTTGTCCGGGGTGGTGGCAGTGAAGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp CCACCCCGGACAAGTAGGACTCGCTCTAGTCCCTCGGTAAGCACCTCTAGGAACTTGAACCATGACTTCTaGGATTCATCTTTAATGCTG +
Preference number: 2 (lower is better)
Translates to: PPRTSRTRSSPSVSTSRNLNHDF*DSSLML
Trigger: CAGCATTAAAGATGAATCTCAGAAGTCATGGTTCAA...GTTCCTAGAGGTGCTTACCGAGGGACTAGAGCGAGTCCTACTTGTCCGGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp CCTCACATTGGACTGGTCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATATCAAGAGTTCAGTATaGTGTGTACAGAACACAGGC +
Preference number: 2 (lower is better)
Translates to: PHIGLVRTHVKQVLESFHIKSSV*CVQNTG
Trigger: GCCTGTGTTCTGTACACATCATACTGAACTCTTGAT...ATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGACCAGTCCAATGTGAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR GCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCGTCTTTCACCAATTGTaGCTCTCTGTCTCGCTCTGT +
Preference number: 2 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIVFHQL*LSVSLC
Trigger: ACAGAGCGAGACAGAGAGGCACAATTGGTGAAAGAC...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR GCA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCAAGTTTCACTGCTGTATaGATCCGCCTCACATTGGAC +
Preference number: 2 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSSFTAV*IRLTLD
Trigger: GTCCAATGTGAGGCGGATGCATACAGCAGTGAAACT...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR CCA 90 bp GGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGACACAAGTATTTCCTTaGCACACTGAACTTTCTTTT +
Preference number: 2 (lower is better)
Translates to: GERGLVGSLGHRNLRQRKTQVFP*HTELSF
Trigger: AAAAGAAAGTTCAGTGTGCCAAGGAAATACTTGTGT...CTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR-3UTR TCA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAACACAGGCTTCTAGTTaGGTGGGAGTGGTAGTAATG +
Preference number: 2 (lower is better)
Translates to: TADQMGALLHRYLRLSSSTQASS*VGVVVM
Trigger: CATTACTACCACTCCCACTCAACTAGAAGCCTGTGT...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCTTTTACACAGGTACTTaGGGCTCAGCTCATCAAGAG +
Preference number: 2 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIFYTGT*GSAHQE
Trigger: CTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAA...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTTTACACAGGTACTTaGGGCTCAGCTCATCAAGAG +
Preference number: 2 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSFYTGT*GSAHQE
Trigger: CTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAA...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp GTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCATTCTAATTTGCCTTTaGCTGCTCAGACGTGGCTTG +
Preference number: 2 (lower is better)
Translates to: VGSLGHRNLRQRKIYRVIILICL*LLRRGL
Trigger: CAAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAAT...GATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
3UTR-3UTR TCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCATTCTAATTTGCCTTTaGCTGCTCAGACGTGGCTTG +
Preference number: 2 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIILICL*LLRRGL
Trigger: CAAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAAT...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp TGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTCTGTCTCGCCTCAATGCGTAAGTaGTATAGGAAGGTGGCTAGG +
Preference number: 2 (lower is better)
Translates to: WSIVALSFGLSPIVPLCLASMRK*YRKVAR
Trigger: CCTAGCCACCTTCCTATATCACTTACGCATTGAGGC...GAGACAGAGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp CCTCACATTGGACTGGTCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATCTCGTAAGTATATGCTaGTATATCACTGTCATGCTC +
Preference number: 2 (lower is better)
Translates to: PHIGLVRTHVKQVLESFHLVSIC*YITVML
Trigger: GAGCATGACAGTGATATATCAGCATATACTTACGAG...ATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGACCAGTCCAATGTGAGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561080.5
3UTR-3UTR GCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGTTGGATAGCCGCATGTaGCGGAGCATCTGGGACCTT +
Preference number: 2 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVELDSRM*RSIWDL
Trigger: AAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAA...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR GCA 90 bp TCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTGTCTTTCACCAATTGTaGCTCTCTGTCTCGCTCTGT +
Preference number: 2 (lower is better)
Translates to: SGRMLSRSWNPSIDFAFCVFHQL*LSVSLC
Trigger: ACAGAGCGAGACAGAGAGGCACAATTGGTGAAAGAC...ACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR GCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGTTTCACTGCTGTATaGATCCGCCTCACATTGGAC +
Preference number: 2 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFSFTAV*IRLTLD
Trigger: GTCCAATGTGAGGCGGATGCATACAGCAGTGAAACT...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR CCA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGGTGGTAGTAATGAGCTaGCACTTCCATGGAGGACGT +
Preference number: 2 (lower is better)
Translates to: PLTAQTWLERLEHCSDVEVVVMS*HFHGGR
Trigger: ACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR CCA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCACATCAGAGCCAATGCTaGTCAATCGTAGCATTGAGT +
Preference number: 2 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSHQSQC*SIVALS
Trigger: ACTCAATGCTACGATTGACCAGCATTGGCTCTGATG...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp TGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTCTGTCTCACACAGGCTTCTAGTTaGGTGGGAGTGGTAGTAATG +
Preference number: 2 (lower is better)
Translates to: WSIVALSFGLSPIVPLCLTQASS*VGVVVM
Trigger: CATTACTACCACTCCCACTCAACTAGAAGCCTGTGT...GAGACAGAGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp TCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCTTTTACACAGGTACTTaGGGCTCAGCTCATCAAGAG +
Preference number: 2 (lower is better)
Translates to: SSSEPMLVNRSIEFRSFTFYTGT*GSAHQE
Trigger: CTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAA...GGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTGATGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCATTCTAATTTGCCTTTaGCTGCTCAGACGTGGCTTG +
Preference number: 2 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFILICL*LLRRGL
Trigger: CAAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAAT...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR GCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACTCGTTGAGTTTCACTaGTGTATGCATCCGCCTCAC +
Preference number: 2 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTLVEFH*CMHPPH
Trigger: GTGAGGCGGATGCATACAGCAGTGAAACTCAACGAG...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR CCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTGTGGTAGTAATGAGCTaGCACTTCCATGGAGGACGT +
Preference number: 2 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASVVVMS*HFHGGR
Trigger: ACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR CCA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGTGGTAGTAATGAGCTaGCACTTCCATGGAGGACGT +
Preference number: 2 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYVVVMS*HFHGGR
Trigger: ACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR CCA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGGTAGTAATGAGCTaGCACTTCCATGGAGGACGT +
Preference number: 2 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDVVVMS*HFHGGR
Trigger: ACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTACACAGGCTTCTAGTTaGGTGGGAGTGGTAGTAATG +
Preference number: 2 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEATQASS*VGVVVM
Trigger: CATTACTACCACTCCCACTCAACTAGAAGCCTGTGT...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTACACAGGCTTCTAGTTaGGTGGGAGTGGTAGTAATG +
Preference number: 2 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVTQASS*VGVVVM
Trigger: CATTACTACCACTCCCACTCAACTAGAAGCCTGTGT...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGTTTTACACAGGTACTTaGGGCTCAGCTCATCAAGAG +
Preference number: 2 (lower is better)
Translates to: PLTAQTWLERLEHCSDVEFYTGT*GSAHQE
Trigger: CTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAA...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCCTTAGTTCGGCCATTTaGAAGGAACCTGAAAGAAAT +
Preference number: 2 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLILSSAI*KEPERN
Trigger: ATTTCTTTCAGGTTCCTTTCAAATGGCCGAACTAAG...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
3UTR-3UTR TCA 90 bp GTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCAAGATTTCACATACTTaGAATTACTGCTCAGCCAGC +
Preference number: 2 (lower is better)
Translates to: VGSLGHRNLRQRKIYRVIKISHT*NYCSAS
Trigger: GCTGGCTGAGCAGTAATTTCAAGTATGTGAAATCTT...GATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR-3UTR TCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTCTAATTGGGCTACTGTaGAGATCCGTATGCTGCACT +
Preference number: 2 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSLIGLL*RSVCCT
Trigger: AGTGCAGCATACGGATCTTCACAGTAGCCCAATTAG...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR GCA 90 bp AATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGATGCCATGTACTTGTCTTTTCTACCTCCGCCTCAATaGGTAAGTGATATAGGAAGG +
Preference number: 2 (lower is better)
Translates to: NPSIDFAFCPRDAMYLSFLPPPQ*VSDIGR
Trigger: CCTTCCTATATCACTTACGCATTGAGGCGGAGGTAG...AAAAGACAAGTACATGGCATCCCGGGGACAAAAAGCGAAGTCAATGGAAGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR CCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGGTGGTAGTAATGAGCTaGCACTTCCATGGAGGACGT +
Preference number: 2 (lower is better)
Translates to: AFSVMTADQMGALLHRYLVVVMS*HFHGGR
Trigger: ACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAATCAAGAGTTCAGTATaGTGTGTACAGAACACAGGC +
Preference number: 2 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTIKSSV*CVQNTG
Trigger: GCCTGTGTTCTGTACACATCATACTGAACTCTTGAT...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGTTTTACACAGGTACTTaGGGCTCAGCTCATCAAGAG +
Preference number: 2 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVFYTGT*GSAHQE
Trigger: CTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAA...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
3UTR-3UTR TCA 90 bp GGTCAATGCCAATCTGTATGCCATTTTAGTAAAGTAGGTAAGGAGAGTAGCCGCATTCTAATTTGCCTTTaGCTGCTCAGACGTGGCTTG +
Preference number: 2 (lower is better)
Translates to: GQCQSVCHFSKVGKESSRILICL*LLRRGL
Trigger: CAAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAAT...GCGGCTACTCTCCTTACCTACTTTACTAAAATGGCATACAGATTGGCATTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
3UTR-3UTR TCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTATTCTAATTTGCCTTTaGCTGCTCAGACGTGGCTTG +
Preference number: 2 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVILICL*LLRRGL
Trigger: CAAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAAT...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp AAAAGACTTAAGATCCTATCCGCTTTGCCATCCTCAGTGGGCCTGGAGGTTGAACTTAGTTCGGCCATTTaGAAGGAACCTGAAAGAAAT +
Preference number: 2 (lower is better)
Translates to: KRLKILSALPSSVGLEVELSSAI*KEPERN
Trigger: ATTTCTTTCAGGTTCCTTTCAAATGGCCGAACTAAG...TTCAACCTCCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTTAAGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
3UTR-3UTR CCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACATGTCTCGCTCTGTTTTaGATAGCCGCATGTGCCGGA +
Preference number: 2 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTCLALF*IAACAG
Trigger: TCCGGCACATGCGGCTATCCAAAACAGAGCGAGACA...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR CAA 90 bp TCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTaGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACA +
Preference number: 2 (lower is better)
Translates to: SVMTADQMGALLHRY*RLSSSRVQYDVYRT
Trigger: TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATATCAAGAGTTCAGTATaGTGTGTACAGAACACAGGC +
Preference number: 2 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDIKSSV*CVQNTG
Trigger: GCCTGTGTTCTGTACACATCATACTGAACTCTTGAT...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGATTCTAATTTGCCTTTaGCTGCTCAGACGTGGCTTG +
Preference number: 2 (lower is better)
Translates to: AFSVMTADQMGALLHRYLILICL*LLRRGL
Trigger: CAAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAAT...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCTTGAACCATGACTTCTaGGATTCATCTTTAATGCTG +
Preference number: 2 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFLNHDF*DSSLML
Trigger: CAGCATTAAAGATGAATCTCAGAAGTCATGGTTCAA...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR GCA 90 bp CTCCAACCACAAACAGCACTTCTAAAACTAACTTTACTTTCTGCCCATAATTTGGCTGGAGTGCAGTGGTaGAATCTCGGTTCACTGCAA +
Preference number: 2 (lower is better)
Translates to: LQPQTALLKLTLLSAHNLAGVQW*NLGSLQ
Trigger: TTGCAGTGAACCGAGATTGCACCACTGCACTCCAGC...CAAATTATGGGCAGAAAGTAAAGTTAGTTTTAGAAGTGCTGTTTGTGGTTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR-3UTR CCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAAAAATGTTTGCATCTTaGCTTGCCGAGGATAATAGG +
Preference number: 2 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTKMFAS*LAEDNR
Trigger: CCTATTATCCTCGGCAAGCCAAGATGCAAACATTTT...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR CCA 90 bp CTCCAACCACAAACAGCACTTCTAAAACTAACTTTACTTTCTGCCCATAATTTGCTTTGCCATCCTCAGTaGGCCTGGAGGTTGAAGCAA +
Preference number: 2 (lower is better)
Translates to: LQPQTALLKLTLLSAHNLLCHPQ*AWRLKQ
Trigger: TTGCTTCAACCTCCAGGCCCACTGAGGATGGCAAAG...CAAATTATGGGCAGAAAGTAAAGTTAGTTTTAGAAGTGCTGTTTGTGGTTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR-3UTR CCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTCTGTTGTCTTCTAATTaGGCTACTGTGAAGATCCGT +
Preference number: 2 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSLLSSN*ATVKIR
Trigger: ACGGATCTTCACAGTAGCCCAATTAGAAGACAACAG...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
3UTR CAA 90 bp TGCCATTTTAGTAAAGTAGGTAAGGAGAGTAGCCGCTCAGTAACGTaGGCACTAAAGAAAGAGTGTGGCTCTAGAACTTCCAATTCCATT +
Preference number: 2 (lower is better)
Translates to: CHFSKVGKESSRSVT*ALKKECGSRTSNSI
Trigger: AATGGAATTGGAAGTTCTAGAGCCACACTCTTTCTTTAGTGCCAACGTTACTGAGCGGCTACTCTCCTTACCTACTTTACTAAAATGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
3UTR-3UTR TCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAACACAGGCTTCTAGTTaGGTGGGAGTGGTAGTAATG +
Preference number: 2 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTTQASS*VGVVVM
Trigger: CATTACTACCACTCCCACTCAACTAGAAGCCTGTGT...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR GCA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATCCTCATCAGAGCCAATaGTGGTCAATCGTAGCATTG +
Preference number: 2 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHPHQSQ*WSIVAL
Trigger: CAATGCTACGATTGACCAGCATTGGCTCTGATGAGG...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR CCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACAAAAATGTTTGCATCTTaGCTTGCCGAGGATAATAGG +
Preference number: 2 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTKMFAS*LAEDNR
Trigger: CCTATTATCCTCGGCAAGCCAAGATGCAAACATTTT...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTTTTACACAGGTACTTaGGGCTCAGCTCATCAAGAG +
Preference number: 2 (lower is better)
Translates to: IFAFSVMTADQMGALLHRFYTGT*GSAHQE
Trigger: CTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAA...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACATTGAACCATGACTTCTaGGATTCATCTTTAATGCTG +
Preference number: 2 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTLNHDF*DSSLML
Trigger: CAGCATTAAAGATGAATCTCAGAAGTCATGGTTCAA...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATTTGAACCATGACTTCTaGGATTCATCTTTAATGCTG +
Preference number: 2 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYLNHDF*DSSLML
Trigger: CAGCATTAAAGATGAATCTCAGAAGTCATGGTTCAA...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR TCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGATCAAGAGTTCAGTATaGTGTGTACAGAACACAGGC +
Preference number: 2 (lower is better)
Translates to: IFAFSVMTADQMGALLHRIKSSV*CVQNTG
Trigger: GCCTGTGTTCTGTACACATCATACTGAACTCTTGAT...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR CCA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGACACAAGTATTTCCTTaGCACACTGAACTTTCTTTT +
Preference number: 2 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVTQVFP*HTELSF
Trigger: AAAAGAAAGTTCAGTGTGCCAAGGAAATACTTGTGT...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR-3UTR CCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAATGTTAAGCAGGTCCTaGAATCCTTCCATTGACTTC +
Preference number: 2 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTMLSRS*NPSIDF
Trigger: GAAGTCAATGGAAGGATTCCAGGACCTGCTTAACAT...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR CAA 90 bp TCCCTTTTACCAATTCATTTATTGGCTCAGCTTGTTAATTCTAATTaGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGT +
Preference number: 2 (lower is better)
Translates to: SLLPIHLLAQLVNSN*PLTAQTWLERLEHC
Trigger: ACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAATTAACAAGCTGAGCCAATAAATGAATTGGTAAAAGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR CCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAAAAATGTTTGCATCTTaGCTTGCCGAGGATAATAGG +
Preference number: 2 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTKMFAS*LAEDNR
Trigger: CCTATTATCCTCGGCAAGCCAAGATGCAAACATTTT...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR CCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGAAAATGTTTGCATCTTaGCTTGCCGAGGATAATAGG +
Preference number: 2 (lower is better)
Translates to: IFAFSVMTADQMGALLHRKMFAS*LAEDNR
Trigger: CCTATTATCCTCGGCAAGCCAAGATGCAAACATTTT...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR CAA 90 bp TTACCAATTCATTTATTGGCTCAGCTTGTTAATTCTAATTTGCCTTaGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGAT +
Preference number: 2 (lower is better)
Translates to: LPIHLLAQLVNSNLP*TAQTWLERLEHCSD
Trigger: ATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAATTAACAAGCTGAGCCAATAAATGAATTGGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR CAA 90 bp CTGTTGATTAATGTGCACCATGACCTGCATTTCTTAGACAACAGCTaGTATGTTTTGTCCATGTTGTATAGAGAACCACAGACTATTTCA +
Preference number: 2 (lower is better)
Translates to: LLINVHHDLHFLDNS*YVLSMLYREPQTIS
Trigger: TGAAATAGTCTGTGGTTCTCTATACAACATGGACAAAACATACAAGCTGTTGTCTAAGAAATGCAGGTCATGGTGCACATTAATCAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
3UTR CAA 90 bp AATGTGCACCATGACCTGCATTTCTTAGACAACAGCTTGTATGTTTaGTCCATGTTGTATAGAGAACCACAGACTATTTCAGTAAATGTT +
Preference number: 2 (lower is better)
Translates to: NVHHDLHFLDNSLYV*SMLYREPQTISVNV
Trigger: AACATTTACTGAAATAGTCTGTGGTTCTCTATACAACATGGACAAAACATACAAGCTGTTGTCTAAGAAATGCAGGTCATGGTGCACATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
3UTR CAA 90 bp CATGACCTGCATTTCTTAGACAACAGCTTGTATGTTTTGTCCATGTaGTATAGAGAACCACAGACTATTTCAGTAAATGTTAATAGCTTC +
Preference number: 2 (lower is better)
Translates to: HDLHFLDNSLYVLSM*YREPQTISVNVNSF
Trigger: GAAGCTATTAACATTTACTGAAATAGTCTGTGGTTCTCTATACAACATGGACAAAACATACAAGCTGTTGTCTAAGAAATGCAGGTCATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
3UTR-3UTR CAA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAAAGATCCTATCCGCTTaGCCATCCTCAGTGGGCCTG +
Preference number: 3 (lower is better)
Translates to: GGTRIGGILGPQESEATEKILSA*PSSVGL
Trigger: CAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTT...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR-3UTR CAA 90 bp GGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGCTGCTCAGACGTGGCTaGAAAGACTTGAGCATTGTT +
Preference number: 3 (lower is better)
Translates to: GERGLVGSLGHRNLRQRKLLRRG*KDLSIV
Trigger: AACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAG...CTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
3UTR-3UTR CAA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAACTTTTACACAGGTACTaGAGGCTCAGCTCATCAAGA +
Preference number: 3 (lower is better)
Translates to: GGTRIGGILGPQESEATELLHRY*RLSSSR
Trigger: TCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
3UTR-3UTR CAA 90 bp TTGTTAGCATGTTTAGGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAAAAGATCCTATCCGCTTaGCCATCCTCAGTGGGCCTG +
Preference number: 3 (lower is better)
Translates to: LLACLGGTRIGGILGPQEKILSA*PSSVGL
Trigger: CAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTT...TTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCCTAAACATGCTAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR-3UTR CAA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAACATGTAACAGTGATTTaGTGTTTCGGGCTGAAGCAG +
Preference number: 3 (lower is better)
Translates to: GGTRIGGILGPQESEATEHVTVI*CFGLKQ
Trigger: CTGCTTCAGCCCGAAACACAAAATCACTGTTACATG...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR-3UTR CAA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCTGCATCCGCCTCACATaGGACTGGTCCGGACGCATG +
Preference number: 3 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFCIRLT*DWSGRM
Trigger: CATGCGTCCGGACCAGTCCAATGTGAGGCGGATGCA...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR GCA 72 bp GCCTCTCTGTCTCGCTCTGTTTTGGATAGCCGCATGTaGCGGAGCATCTGGGACCTTTGTTCCATCATCAAA +
Preference number: 3 (lower is better)
Translates to: ASLSRSVLDSRM*RSIWDLCSIIK
Trigger: TTTGATGATGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCGAGACAGAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
3UTR CCA 72 bp ACATTGGACTGGTCCGGACGCATGTTAAGCAGGTCCTaGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGG +
Preference number: 3 (lower is better)
Translates to: TLDWSGRMLSRS*NPSIDFAFCPR
Trigger: CCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGACCAGTCCAATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACACTGTCTCGCTCTGTTTaGGATAGCCGCATGTGCCGG +
Preference number: 3 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTLSRSV*DSRMCR
Trigger: CCGGCACATGCGGCTATCCAAAACAGAGCGAGACAG...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp CCTCACATTGGACTGGTCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATCGGGATGCCATGTACTaGTCTTTTGTCCAAGTCATG +
Preference number: 3 (lower is better)
Translates to: PHIGLVRTHVKQVLESFHRDAMY*SFVQVM
Trigger: CATGACTTGGACAAAAGACAAGTACATGGCATCCCG...ATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGACCAGTCCAATGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR CCA 72 bp GTGGCAGAATTCCTAGGCAGGCTGACCTTTACAGTATaGGCCTTTAAGATACTGGATCCTGGTTGGGCACAG +
Preference number: 3 (lower is better)
Translates to: VAEFLGRLTFTV*AFKILDPGWAQ
Trigger: CTGTGCCCAACCAGGATCCAGTATCTTAAAGGCCCATACTGTAAAGGTCAGCCTGCCTAGGAATTCTGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR-3UTR CAA 90 bp TCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGTCCCCAGCCGCTCAGTAACGTaGGCACTAAAGAAAGAGTGT +
Preference number: 3 (lower is better)
Translates to: SLGHRNLRQRKIYRVIVPSRSVT*ALKKEC
Trigger: ACACTCTTTCTTTAGTGCCAACGTTACTGAGCGGCT...GGGGACGATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
3UTR-3UTR CAA 90 bp CCACCCCGGACAAGTAGGACTCGCTCTAGTCCCTCGGTAAGCACCTCTAGGAACTTCATTTGGATACTGTaGTCTTCTAATTGGGCTACT +
Preference number: 3 (lower is better)
Translates to: PPRTSRTRSSPSVSTSRNFIWIL*SSNWAT
Trigger: AGTAGCCCAATTAGAAGACAACAGTATCCAAATGAA...GTTCCTAGAGGTGCTTACCGAGGGACTAGAGCGAGTCCTACTTGTCCGGGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp AATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGATGCCATGTACTTGTCTTTTCTGTCTCGCTCTGTTTaGGATAGCCGCATGTGCCGG +
Preference number: 3 (lower is better)
Translates to: NPSIDFAFCPRDAMYLSFLSRSV*DSRMCR
Trigger: CCGGCACATGCGGCTATCCAAAACAGAGCGAGACAG...AAAAGACAAGTACATGGCATCCCGGGGACAAAAAGCGAAGTCAATGGAAGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCCTGCTCAGACGTGGCTaGAAAGACTTGAGCATTGTT +
Preference number: 3 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLILLRRG*KDLSIV
Trigger: AACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAG...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCCCTGGAATCCTTCCATaGACTTCGCTTTTTGTCCCC +
Preference number: 3 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFPGILP*TSLFVP
Trigger: GGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGG...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp TCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCTGCTCAGACGTGGCTaGAAAGACTTGAGCATTGTT +
Preference number: 3 (lower is better)
Translates to: SGRMLSRSWNPSIDFAFCLLRRG*KDLSIV
Trigger: AACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAG...ACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACACTGCTCAGACGTGGCTaGAAAGACTTGAGCATTGTT +
Preference number: 3 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTLLRRG*KDLSIV
Trigger: AACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAG...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAATTCTAATTTGCCTTaGACTGCTCAGACGTGGCTT +
Preference number: 3 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLINSNLP*TAQTWL
Trigger: AAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAATT...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCAAATTCTAATTTGCCTTaGACTGCTCAGACGTGGCTT +
Preference number: 3 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSNSNLP*TAQTWL
Trigger: AAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAATT...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACATGTTTGCATCTTGGCTaGCCGAGGATAATAGGTCCA +
Preference number: 3 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTCLHLG*PRIIGP
Trigger: TGGACCTATTATCCTCGGCAAGCCAAGATGCAAACA...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACTGTCTCGCTCTGTTTaGGATAGCCGCATGTGCCGG +
Preference number: 3 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTLSRSV*DSRMCR
Trigger: CCGGCACATGCGGCTATCCAAAACAGAGCGAGACAG...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCCCATGTACTTGTCTTTaGTCCAAGTCATGTGCACCT +
Preference number: 3 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFPCTCL*SKSCAP
Trigger: AGGTGCACATGACTTGGACAAAAGACAAGTACATGG...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR CCA 72 bp AAAGACTTAAGATCCTATCCGCTTTGCCATCCTCAGTaGGCCTGGAGGTTGAAGCAAGCAAAGGGAACAAAT +
Preference number: 3 (lower is better)
Translates to: KDLRSYPLCHPQ*AWRLKQAKGTN
Trigger: ATTTGTTCCCTTTGCTTGCTTCAACCTCCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTTAAGTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR CCA 72 bp AGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTaGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCA +
Preference number: 3 (lower is better)
Translates to: RFLSLRPHQSQC*SIVALSFGLSP
Trigger: TGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACACTTTTACACAGGTACTaGAGGCTCAGCTCATCAAGA +
Preference number: 3 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTLLHRY*RLSSSR
Trigger: TCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTCTGCTCAGACGTGGCTaGAAAGACTTGAGCATTGTT +
Preference number: 3 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVLLRRG*KDLSIV
Trigger: AACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAG...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp TTGTTAGCATGTTTAGGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATATGTTTTGTCCATGTaGTATAGAGAACCACAGACT +
Preference number: 3 (lower is better)
Translates to: LLACLGGTRIGGILGPQEYVLSM*YREPQT
Trigger: AGTCTGTGGTTCTCTATACAACATGGACAAAACATA...TTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCCTAAACATGCTAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
3UTR-3UTR CAA 90 bp GTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGAAGATTTCACATACTaGAAATTACTGCTCAGCCAG +
Preference number: 3 (lower is better)
Translates to: VGSLGHRNLRQRKIYRVIEDFTY*KLLLSQ
Trigger: CTGGCTGAGCAGTAATTTCAAGTATGTGAAATCTTC...GATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR-3UTR CAA 90 bp TTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGATGCCTTCATTTGGATACTGTaGTCTTCTAATTGGGCTACT +
Preference number: 3 (lower is better)
Translates to: LSRSWNPSIDFAFCPRDAFIWIL*SSNWAT
Trigger: AGTAGCCCAATTAGAAGACAACAGTATCCAAATGAA...GGCATCCCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
3UTR GCA 72 bp GCCGGAGCATCTGGGACCTTTGTTCCATCATCAAAGTaGGCTCGTAAGTATATGCTGATATATCACTGTCAT +
Preference number: 3 (lower is better)
Translates to: AGASGTFVPSSK*ARKYMLIYHCH
Trigger: ATGACAGTGATATATCAGCATATACTTACGAGCGCACTTTGATGATGGAACAAAGGTCCCAGATGCTCCGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
3UTR GCA 72 bp GATAGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATaGTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCA +
Preference number: 3 (lower is better)
Translates to: DRFLSLRPHQSQ*WSIVALSFGLS
Trigger: TGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR CCA 72 bp TTAAGATCCTATCCGCTTTGCCATCCTCAGTGGGCCTaGAGGTTGAAGCAAGCAAAGGGAACAAATCAAAAT +
Preference number: 3 (lower is better)
Translates to: LRSYPLCHPQWA*RLKQAKGTNQN
Trigger: ATTTTGATTTGTTCCCTTTGCTTGCTTCAACCTCCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR-3UTR CAA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATCTTTTACACAGGTACTaGAGGCTCAGCTCATCAAGA +
Preference number: 3 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYLLHRY*RLSSSR
Trigger: TCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTCGTGGCTTGAAAGACTaGAGCATTGTTCTGATGTTG +
Preference number: 3 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVRGLKD*SIVLML
Trigger: CAACATCAGAACAATGCTCAAGTCTTTCAAGCCACG...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACGTGGCTTGAAAGACTaGAGCATTGTTCTGATGTTG +
Preference number: 3 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTRGLKD*SIVLML
Trigger: CAACATCAGAACAATGCTCAAGTCTTTCAAGCCACG...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGCTGCTCAGACGTGGCTaGAAAGACTTGAGCATTGTT +
Preference number: 3 (lower is better)
Translates to: AFSVMTADQMGALLHRYLLLRRG*KDLSIV
Trigger: AACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAG...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATTCGGTCTTTCACCAATaGTGCCTCTCTGTCTCGCTC +
Preference number: 3 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHSVFHQ*CLSVSL
Trigger: GAGCGAGACAGAGAGGCACAATTGGTGAAAGACCGA...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR CCA 72 bp CTTCCAATTCCATTGCTAGATGTGCCCTTTAAAAGATaGTCCAGTGCTTTCAGGGAAGGATGTTTAGCCAGT +
Preference number: 3 (lower is better)
Translates to: LPIPLLDVPFKR*SSAFREGCLAS
Trigger: ACTGGCTAAACATCCTTCCCTGAAAGCACTGGACCATCTTTTAAAGGGCACATCTAGCAATGGAATTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
3UTR-3UTR CAA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGCGTGGCTTGAAAGACTaGAGCATTGTTCTGATGTTG +
Preference number: 3 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVERGLKD*SIVLML
Trigger: CAACATCAGAACAATGCTCAAGTCTTTCAAGCCACG...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACCGTGGCTTGAAAGACTaGAGCATTGTTCTGATGTTG +
Preference number: 3 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYRGLKD*SIVLML
Trigger: CAACATCAGAACAATGCTCAAGTCTTTCAAGCCACG...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp GGCTTGGCTAATCTCGTAGTTCAGGGCCAAGTTTCTGTAGTCAGAATGAAGAATAATTCTAATTTGCCTTaGACTGCTCAGACGTGGCTT +
Preference number: 3 (lower is better)
Translates to: GLANLVVQGQVSVVRMKNNSNLP*TAQTWL
Trigger: AAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAATT...ATTCTTCATTCTGACTACAGAAACTTGGCCCTGAACTACGAGATTAGCCAAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
3UTR-3UTR CAA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGAATTCTAATTTGCCTTaGACTGCTCAGACGTGGCTT +
Preference number: 3 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVNSNLP*TAQTWL
Trigger: AAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAATT...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
3UTR-3UTR CAA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAGAGCATCTGGGACCTTaGTTCCATCATCAAAGTGCG +
Preference number: 3 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTEHLGP*FHHQSA
Trigger: CGCACTTTGATGATGGAACAAAGGTCCCAGATGCTC...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACTGGTCAATCGTAGCATaGAGTTTCGGTCTTTCACCA +
Preference number: 3 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYWSIVA*SFGLSP
Trigger: TGGTGAAAGACCGAAACTCAATGCTACGATTGACCA...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAATTCTAATTTGCCTTaGACTGCTCAGACGTGGCTT +
Preference number: 3 (lower is better)
Translates to: AFSVMTADQMGALLHRYLNSNLP*TAQTWL
Trigger: AAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAATT...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp GGTCAATGCCAATCTGTATGCCATTTTAGTAAAGTAGGTAAGGAGAGTAGCCGCCTTGTTAATTCTAATTaGCCTTTGACTGCTCAGACG +
Preference number: 3 (lower is better)
Translates to: GQCQSVCHFSKVGKESSRLVNSN*PLTAQT
Trigger: CGTCTGAGCAGTCAAAGGCAAATTAGAATTAACAAG...GCGGCTACTCTCCTTACCTACTTTACTAAAATGGCATACAGATTGGCATTGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
3UTR-3UTR CAA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACTTGTTAATTCTAATTaGCCTTTGACTGCTCAGACG +
Preference number: 3 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTLVNSN*PLTAQT
Trigger: CGTCTGAGCAGTCAAAGGCAAATTAGAATTAACAAG...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTCTTGTTAATTCTAATTaGCCTTTGACTGCTCAGACG +
Preference number: 3 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVLVNSN*PLTAQT
Trigger: CGTCTGAGCAGTCAAAGGCAAATTAGAATTAACAAG...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR TCA 72 bp TTGTTCCATCATCAAAGTGCGCTCGTAAGTATATGCTaGTATATCACTGTCATGCATCTCCACCACTTCTAC +
Preference number: 3 (lower is better)
Translates to: LFHHQSALVSIC*YITVMHLHHFY
Trigger: GTAGAAGTGGTGGAGATGCATGACAGTGATATATCAGCATATACTTACGAGCGCACTTTGATGATGGAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559664.5
3UTR-3UTR CAA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGCTTTTACACAGGTACTaGAGGCTCAGCTCATCAAGA +
Preference number: 3 (lower is better)
Translates to: IFAFSVMTADQMGALLHRLLHRY*RLSSSR
Trigger: TCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATCTTTTACACAGGTACTaGAGGCTCAGCTCATCAAGA +
Preference number: 3 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHLLHRY*RLSSSR
Trigger: TCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACATGGTCAATCGTAGCATaGAGTTTCGGTCTTTCACCA +
Preference number: 3 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTWSIVA*SFGLSP
Trigger: TGGTGAAAGACCGAAACTCAATGCTACGATTGACCA...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR-3UTR CAA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATAATTCTAATTTGCCTTaGACTGCTCAGACGTGGCTT +
Preference number: 3 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHNSNLP*TAQTWL
Trigger: AAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAATT...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR GCA 72 bp GGTAAAATTTCTTCAACAGGTCAATGCCAATCTGTATaGCATTTTAGTAAAGTAGGTAAGGAGAGTAGCCGC +
Preference number: 3 (lower is better)
Translates to: GKISSTGQCQSV*HFSKVGKESSR
Trigger: GCGGCTACTCTCCTTACCTACTTTACTAAAATGGCATACAGATTGGCATTGACCTGTTGAAGAAATTTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
3UTR CCA 72 bp GGACATGACTCACTACTGTTAAACTCAACTAAGCAATaGAGTGTTGCAGTGGGAGTTGTAAATAATGCTTCT +
Preference number: 3 (lower is better)
Translates to: GHDSLLLNSTKQ*SVAVGVVNNAS
Trigger: AGAAGCATTATTTACAACTCCCACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
3UTR-3UTR CAA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATTTTGCTTCATGGGACTaGTTAACTATAACCTCGTTG +
Preference number: 3 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHFASWD*LTITSL
Trigger: CAACGAGGTTATAGTTAACAAGTCCCATGAAGCAAA...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
3UTR TCA 72 bp TTGTTCCATCATCAAAGTGCGCTCGTAAGTATATGCTaGTATATCACTGTCATGCTCTTGTATCTCAAACTC +
Preference number: 3 (lower is better)
Translates to: LFHHQSALVSIC*YITVMLLYLKL
Trigger: GAGTTTGAGATACAAGAGCATGACAGTGATATATCAGCATATACTTACGAGCGCACTTTGATGATGGAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561080.5
3UTR TCA 72 bp GTTATCCTCACAGTGTCAACATTGAACCATGACTTCTaGGATTCATCTTTAATGCTGAATACGTACTTGACT +
Preference number: 3 (lower is better)
Translates to: VILTVSTLNHDF*DSSLMLNTYLT
Trigger: AGTCAAGTACGTATTCAGCATTAAAGATGAATCTCAGAAGTCATGGTTCAATGTTGACACTGTGAGGATAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTTGCCCTCTCTCAGCTTaGCGGCCACCACCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RFTASSTSRVHAILPPQPCPLSA*RPPPAG
Trigger: GCCAGCTGGTGGTGGCCGCCAAGCTGAGAGAGGGCA...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp CCACCCCGGACAAGTAGGACTCGCTCTAGTCCCTCGGTAAGCACCTCTAGGAACTCTCCGAGAGGTCGGTaGGGGTGGCGCGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: PPRTSRTRSSPSVSTSRNSPRGR*GWRARS
Trigger: AGAGCGGGCGCGCCACCCCCACCGACCTCTCGGAGA...GTTCCTAGAGGTGCTTACCGAGGGACTAGAGCGAGTCCTACTTGTCCGGGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CCACCCCGGACAAGTAGGACTCGCTCTAGTCCCTCGGTAAGCACCTCTAGGAACAGAGGTCGGTGGGGGTaGCGCGCCCGCTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PPRTSRTRSSPSVSTSRNRGRWG*RARSSP
Trigger: AGGAGAAGAGCGGGCGCGCCACCCCCACCGACCTCT...GTTCCTAGAGGTGCTTACCGAGGGACTAGAGCGAGTCCTACTTGTCCGGGGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGCCTCGGTGCACCTGTaGGGCTCTGAAGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GGTRIGGILGPQESEATEASVHL*GSEVQP
Trigger: GGGCTGGACTTCAGAGCCTCACAGGTGCACCGAGGC...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCGGGCATCTTCGCTTTaGCGCCAGCCATTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RFTASSTSRVHAILPPQPRASSL*RQPLGQ
Trigger: CTGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCG...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp CTCGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCAGACGGCCACGCAGGCTaGCCTGACTGGGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LALFWIAACAGASGTFVPDGHAG*PDWAAG
Trigger: CCCTGCTGCCCAGTCAGGCCAGCCTGCGTGGCCGTC...TGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ATCACTTCACTGCCACCACCCCGGACAAGTAGGACTCGCTCTAGTCCCTCGGTAGCCTCGGTGCACCTGTaGGGCTCTGAAGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: ITSLPPPRTSRTRSSPSVASVHL*GSEVQP
Trigger: GGGCTGGACTTCAGAGCCTCACAGGTGCACCGAGGC...TACCGAGGGACTAGAGCGAGTCCTACTTGTCCGGGGTGGTGGCAGTGAAGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTTCCTGCTTTGAGCTGTaGGGCAAAGGTGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: RFTASSTSRVHAILPPQPSCFEL*GKGEEA
Trigger: CGCCTCCTCACCTTTGCCTCACAGCTCAAAGCAGGA...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp TCTCGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCGGGCATCTTCGCTTTaGCGCCAGCCATTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SRFTASSTSRVHAILPPQRASSL*RQPLGQ
Trigger: CTGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCG...CTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAGCCCGGGGGTGCAGTaGGAGGGCGGAACCGTCCCG +
Preference number: 4 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKSPGVQ*EGGTVP
Trigger: CGGGACGGTTCCGCCCTCTCACTGCACCCCCGGGCT...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397702.6
ENST00000558667.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTGCTAAACTAGGCTCTTaGGAGATCGAAGCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: RFTASSTSRVHAILPPQPAKLGS*EIEAAA
Trigger: GGCAGCGGCTTCGATCTCTCAAGAGCCTAGTTTAGC...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000290209.9
CDS-3UTR TCA 90 bp TCTCGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGGGCCACATGACTGGATaGGGTGGGAAATGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: SRFTASSTSRVHAILPPQGHMTG*GGKCPL
Trigger: GAGAGGGCATTTCCCACCTCATCCAGTCATGTGGCC...CTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp GGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGGCAGAGGTGCAATCCTaGCTCACTGCAACCTCCGCC +
Preference number: 4 (lower is better)
Translates to: GERGLVGSLGHRNLRQRKAEVQS*LTATSA
Trigger: GGCGGAGGTTGCAGTGAGCCAGGATTGCACCTCTGC...CTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp TCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGTCCCCTCTCCGAGAGGTCGGTaGGGGTGGCGCGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: SLGHRNLRQRKIYRVIVPSPRGR*GWRARS
Trigger: AGAGCGGGCGCGCCACCCCCACCGACCTCTCGGAGA...GGGGACGATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp CCACCCCGGACAAGTAGGACTCGCTCTAGTCCCTCGGTAAGCACCTCTAGGAACAGTGCGTCATCACTGTaGAAGATGGCAGCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: PPRTSRTRSSPSVSTSRNSASSL*KMAARG
Trigger: CCCCCGAGCTGCCATCTTTCACAGTGATGACGCACT...GTTCCTAGAGGTGCTTACCGAGGGACTAGAGCGAGTCCTACTTGTCCGGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCCTCTCTGTCTCGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACAGTGCGTCATCACTGTaGAAGATGGCAGCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: ASLSRSVLDSRMCRSIWDSASSL*KMAARG
Trigger: CCCCCGAGCTGCCATCTTTCACAGTGATGACGCACT...GTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCGAGACAGAGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTGGAAGATATATAGAGTaGTCGTCCCCCTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: RFTASSTSRVHAILPPQPGRYIE*SSPCRR
Trigger: CCTTCGGCAGGGGGACGATCACTCTATATATCTTCC...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCATATCCCGGCGCCAGCTaGTGCGGGTGCGCGCGCAGC +
Preference number: 4 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQAYPGAS*CGCARS
Trigger: GCTGCGCGCGCACCCGCATCAGCTGGCGCCGGGATA...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCCTCTCTGTCTCGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACGACTCAGGTCCTCGATaGCATCCTGGGGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: ASLSRSVLDSRMCRSIWDDSGPR*HPGGEK
Trigger: CTTCTCACCCCCAGGATGTCATCGAGGACCTGAGTC...GTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCGAGACAGAGAGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGAGCCCGGGGGTGCAGTaGGAGGGCGGAACCGTCCCG +
Preference number: 4 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSESPGVQ*EGGTVP
Trigger: CGGGACGGTTCCGCCCTCTCACTGCACCCCCGGGCT...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397702.6
ENST00000558667.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGCCCGGGGGTGCAGTaGGAGGGCGGAACCGTCCCG +
Preference number: 4 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFSPGVQ*EGGTVP
Trigger: CGGGACGGTTCCGCCCTCTCACTGCACCCCCGGGCT...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000397702.6
ENST00000558667.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGATGCCACGAGCCACCCCCTTTaGCGGAGGCGCGTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: LSRSWNPSIDFAFCPRDATSHPL*RRRVLP
Trigger: GGGGAGAACGCGCCTCCGGCAAAGGGGGTGGCTCGT...GGCATCCCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTACCAGCAGTGCAAGATaGGCAGCAGTTGTCACTCGA +
Preference number: 4 (lower is better)
Translates to: RFTASSTSRVHAILPPQPTSSAR*AAVVTR
Trigger: TCGAGTGACAACTGCTGCCCATCTTGCACTGCTGGT...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCTTTGCCATCCTCAGTaGGCCTGGAGGTTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: RFTASSTSRVHAILPPQPLCHPQ*AWRLKQ
Trigger: TTGCTTCAACCTCCAGGCCCACTGAGGATGGCAAAG...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp GGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGCCTGCCGAAGGAACCTaGCACCTGTCAAGCAGATGC +
Preference number: 4 (lower is better)
Translates to: GERGLVGSLGHRNLRQRKPAEGT*HLSSRC
Trigger: GCATCTGCTTGACAGGTGCCAGGTTCCTTCGGCAGG...CTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAAGGGGGAACGAGGATTaGTGGGATCCTTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: GGTRIGGILGPQESEATERGNED*WDPWAT
Trigger: TGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCCT...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp CCTTCTCCTGATAGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCATCTCCGAGAGGTCGGTaGGGGTGGCGCGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: PSPDRFLSLRPHQSQCWSSPRGR*GWRARS
Trigger: AGAGCGGGCGCGCCACCCCCACCGACCTCTCGGAGA...TGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCTATCAGGAGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGAGCAGTTACGTGACCTaGCCTCCCCCAGCCCCGGGC +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARSSYVT*PPPAPG
Trigger: GCCCGGGGCTGGGGGAGGCCAGGTCACGTAACTGCT...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000561080.5
CDS-3UTR TCA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCAAGATGGACACAATaGCACAGGCCAGGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: RFTASSTSRVHAILPPQPPRWTQ*HRPGKV
Trigger: CACTTTTCCTGGCCTGTGTCATTGTGTCCATCTTGG...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTGCCTCGGTGCACCTGTaGGGCTCTGAAGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGASVHL*GSEVQP
Trigger: GGGCTGGACTTCAGAGCCTCACAGGTGCACCGAGGC...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTGATCCAGGGAGGCAATaGGTATTCCAAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: RFTASSTSRVHAILPPQPDPGRQ*VFQALQ
Trigger: TTGCAGAGCTTGGAATACTCATTGCCTCCCTGGATC...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTGCCTCAATGCGTAAGTaGTATAGGAAGGTGGCTAGG +
Preference number: 4 (lower is better)
Translates to: RFTASSTSRVHAILPPQPASMRK*YRKVAR
Trigger: CCTAGCCACCTTCCTATATCACTTACGCATTGAGGC...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTTATCCCGGCGCCAGCTaGTGCGGGTGCGCGCGCAGC +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGYPGAS*CGCARS
Trigger: GCTGCGCGCGCACCCGCATCAGCTGGCGCCGGGATA...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCTCGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCACGGCACCCGGCCTaGAGTTTCTTACCAAAAACA +
Preference number: 4 (lower is better)
Translates to: SRFTASSTSRVHAILPPQPRHPA*SFLPKT
Trigger: TGTTTTTGGTAAGAAACTTCAGGCCGGGTGCCGTGG...CTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676379.1
CDS-3UTR CCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTGCCCTCTCTCAGCTTaGCGGCCACCACCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARCPLSA*RPPPAG
Trigger: GCCAGCTGGTGGTGGCCGCCAAGCTGAGAGAGGGCA...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGTGCCCTCTCTCAGCTTaGCGGCCACCACCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKCPLSA*RPPPAG
Trigger: GCCAGCTGGTGGTGGCCGCCAAGCTGAGAGAGGGCA...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTGGGCCTTTAAGATACTaGATCCTGGTTGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: RFTASSTSRVHAILPPQPGPLRY*ILVGHS
Trigger: ACTGTGCCCAACCAGGATCCAGTATCTTAAAGGCCC...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCTGAAGCCATCTTGGTaGTGGTTTCTGGAGGATGCA +
Preference number: 4 (lower is better)
Translates to: RFTASSTSRVHAILPPQPLKPSW*WFLEDA
Trigger: TGCATCCTCCAGAAACCACCACCAAGATGGCTTCAG...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAATTGCCAGCGAAGTGGTaGCCCCAGACATCTCACTCA +
Preference number: 4 (lower is better)
Translates to: GGTRIGGILGPQESEATELPAKW*PQTSHS
Trigger: TGAGTGAGATGTCTGGGGCCACCACTTCGCTGGCAA...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp GCCTCTCTGTCTCGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACAGTCCGGTCACTGGGTaGATCCAGTGCAACAGTTGC +
Preference number: 4 (lower is better)
Translates to: ASLSRSVLDSRMCRSIWDSPVTG*IQCNSC
Trigger: GCAACTGTTGCACTGGATCCACCCAGTGACCGGACT...GTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCGAGACAGAGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGGAGAAGTCCGGTCACTaGGTGGATCCAGTGCAACAG +
Preference number: 4 (lower is better)
Translates to: GERGLVGSLGHRNLRQRKEKSGH*VDPVQQ
Trigger: CTGTTGCACTGGATCCACCCAGTGACCGGACTTCTC...CTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTGAGCAAAAGAAGACTTaGTGGCTCCAGCATAGATGG +
Preference number: 4 (lower is better)
Translates to: RFTASSTSRVHAILPPQPEQKKT*WLQHRW
Trigger: CCATCTATGCTGGAGCCATCAAGTCTTCTTTTGCTC...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp CGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGCAAACCGGGCTGCACTaGGGGACAGCCCACGGATAC +
Preference number: 4 (lower is better)
Translates to: RMLSRSWNPSIDFAFCPRQTGLH*GTAHGY
Trigger: GTATCCGTGGGCTGTCCCTCAGTGCAGCCCGGTTTG...CCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCAAACCGGGCTGCACTaGGGGACAGCCCACGGATAC +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGQTGLH*GTAHGY
Trigger: GTATCCGTGGGCTGTCCCTCAGTGCAGCCCGGTTTG...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCTCGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCTGGAATCCTTCCATTaGCTTCGCTTTTTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: SRFTASSTSRVHAILPPQLESFH*LRFLSP
Trigger: CGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAG...CTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATTATCCCGGCGCCAGCTaGTGCGGGTGCGCGCGCAGC +
Preference number: 4 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYYPGAS*CGCARS
Trigger: GCTGCGCGCGCACCCGCATCAGCTGGCGCCGGGATA...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATTATCCCGGCGCCAGCTaGTGCGGGTGCGCGCGCAGC +
Preference number: 4 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDYPGAS*CGCARS
Trigger: GCTGCGCGCGCACCCGCATCAGCTGGCGCCGGGATA...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTGGTTTCTCCTGCGTGTaGCAGGACGAGCCACCCCCT +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGGFSCV*QDEPPP
Trigger: AGGGGGTGGCTCGTCCTGTCACACGCAGGAGAAACC...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCTCGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGTTGTCGGTGTCACCATaGACCGAACTGAAGCCATCT +
Preference number: 4 (lower is better)
Translates to: SRFTASSTSRVHAILPPQLSVSP*TELKPS
Trigger: AGATGGCTTCAGTTCGGTTCATGGTGACACCGACAA...CTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGTCCGGACTGGTGTCTaGCAAACCTGGAATGTCATC +
Preference number: 4 (lower is better)
Translates to: GGTRIGGILGPQESEATEVRTGV*QTWNVI
Trigger: GATGACATTCCAGGTTTGTCAGACACCAGTCCGGAC...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp TCTCGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGTTTAGCCACCAGCAGTaGAAGATGGGCAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: SRFTASSTSRVHAILPPQFSHQQ*KMGSSC
Trigger: ACAACTGCTGCCCATCTTGCACTGCTGGTGGCTAAA...CTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCTACCTCCGCCTCAATaGGTAAGTGATATAGGAAGG +
Preference number: 4 (lower is better)
Translates to: RFTASSTSRVHAILPPQPLPPPQ*VSDIGR
Trigger: CCTTCCTATATCACTTACGCATTGAGGCGGAGGTAG...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCCTCATCAGAGCCAATaGTGGTCAATCGTAGCATTG +
Preference number: 4 (lower is better)
Translates to: RFTASSTSRVHAILPPQPPHQSQ*WSIVAL
Trigger: CAATGCTACGATTGACCAGCATTGGCTCTGATGAGG...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp AGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCATCATCAAAGTGCGCTCGCAAGACACCTCGGACTaGAGCTCAGAGTCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: SRMCRSIWDLCSIIKVRSQDTSD*SSESWQ
Trigger: TTGCCACGACTCTGAGCTGCAGTCCGAGGTGTCTTG...CGAGCGCACTTTGATGATGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GCCTCTCTGTCTCGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACACTGGGTGGATCCAGTaGAACAGTTGCCAGCGAAGT +
Preference number: 4 (lower is better)
Translates to: ASLSRSVLDSRMCRSIWDTGWIQ*NSCQRS
Trigger: ACTTCGCTGGCAACTGTTGCACTGGATCCACCCAGT...GTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCGAGACAGAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAACCGTCGTCTAACAGTTaGCTGTGTTCCCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: GGTRIGGILGPQESEATEPSSNS*LCSPVM
Trigger: CATCACAGGGGAACACAGCCAACTGTTAGACGACGG...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp GTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCTGCCCTCTCTCAGCTTaGCGGCCACCACCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: VGSLGHRNLRQRKIYRVICPLSA*RPPPAG
Trigger: GCCAGCTGGTGGTGGCCGCCAAGCTGAGAGAGGGCA...GATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp GCCTCTCTGTCTCGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACTGTCTCGCTCTGTTTTaGATAGCCGCATGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: ASLSRSVLDSRMCRSIWDCLALF*IAACAG
Trigger: TCCGGCACATGCGGCTATCCAAAACAGAGCGAGACA...GTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCGAGACAGAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGACGGCCACGCAGGCTaGCCTGACTGGGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQDGHAG*PDWAAG
Trigger: CCCTGCTGCCCAGTCAGGCCAGCCTGCGTGGCCGTC...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTCTGTCTGACGGCCACGCAGGCTaGCCTGACTGGGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LVNRSIEFRSFTNCASLSDGHAG*PDWAAG
Trigger: CCCTGCTGCCCAGTCAGGCCAGCCTGCGTGGCCGTC...AGACAGAGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGGTCGGTGGGGGTaGCGCGCCCGCTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: TADQMGALLHRYLRLSSSRGRWG*RARSSP
Trigger: AGGAGAAGAGCGGGCGCGCCACCCCCACCGACCTCT...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCATCTCCCACGGTTCTAGTTaGGCGAAGTGCGTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: RSVLDSRMCRSIWDLCSISHGSS*AKCVQA
Trigger: TGCCTGCACGCACTTCGCCCAACTAGAACCGTGGGA...GATGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAACAATTGCAAAAGCCTaGAGAACTCCAGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: GGTRIGGILGPQESEATETIAKA*RTPAVP
Trigger: GGGCACAGCTGGAGTTCTTCAGGCTTTTGCAATTGT...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAACTGAAGGCTTTTCGATaGTCTCTCCCTTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: GGTRIGGILGPQESEATELKAFR*SLPWVG
Trigger: ACCTACCCAAGGGAGAGATCATCGAAAAGCCTTCAG...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTATCTCCAGATCTGTTTaGTCCAGCCATGATACCTGT +
Preference number: 4 (lower is better)
Translates to: RFTASSTSRVHAILPPQPISRSV*SSHDTC
Trigger: ACAGGTATCATGGCTGGATCAAACAGATCTGGAGAT...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCAGCCTCGGTGCACCTGTaGGGCTCTGAAGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQAASVHL*GSEVQP
Trigger: GGGCTGGACTTCAGAGCCTCACAGGTGCACCGAGGC...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGGCCTCGGTGCACCTGTaGGGCTCTGAAGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSEASVHL*GSEVQP
Trigger: GGGCTGGACTTCAGAGCCTCACAGGTGCACCGAGGC...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CTCCTGATAGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGCAAACCGGGCTGCACTaGGGGACAGCCCACGGATAC +
Preference number: 4 (lower is better)
Translates to: LLIGFCLFVLIRANAGQSQTGLH*GTAHGY
Trigger: GTATCCGTGGGCTGTCCCTCAGTGCAGCCCGGTTTG...CGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCTATCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGCGGGCATCTTCGCTTTaGCGCCAGCCATTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: RMLSRSWNPSIDFAFCPRRASSL*RQPLGQ
Trigger: CTGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCG...CCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTTTTTACACAGGTACTTaGGGCTCAGCTCATCAAGAG +
Preference number: 4 (lower is better)
Translates to: RFTASSTSRVHAILPPQPFYTGT*GSAHQE
Trigger: CTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAA...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGTATCCCGGCGCCAGCTaGTGCGGGTGCGCGCGCAGC +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVEYPGAS*CGCARS
Trigger: GCTGCGCGCGCACCCGCATCAGCTGGCGCCGGGATA...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCATCATCAAAGTGCGCTCGGTCCGGACTGGTGTCTaGCAAACCTGGAATGTCATC +
Preference number: 4 (lower is better)
Translates to: SRMCRSIWDLCSIIKVRSVRTGV*QTWNVI
Trigger: GATGACATTCCAGGTTTGTCAGACACCAGTCCGGAC...CGAGCGCACTTTGATGATGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGCAGCAGTTACGTaGCCTGGCCTCCCCCAGCCC +
Preference number: 4 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFRAAVT*PGLPQP
Trigger: GGGCTGGGGGAGGCCAGGTCACGTAACTGCTGCTCT...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000561080.5
CDS-3UTR GCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGCAAAGCAAACCGGGCTaGACTGAGGGACAGCCCACG +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARQSKPG*TEGQPT
Trigger: CGTGGGCTGTCCCTCAGTGCAGCCCGGTTTGCTTTG...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTAGGTGCTTTATGGTCTaGTCAGCAGCTAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RFTASSTSRVHAILPPQPRCFMV*SAAKAS
Trigger: TGAAGCTTTAGCTGCTGAGCAGACCATAAAGCACCT...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp GGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGTTTAGCCACCAGCAGTaGAAGATGGGCAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: GERGLVGSLGHRNLRQRKFSHQQ*KMGSSC
Trigger: ACAACTGCTGCCCATCTTGCACTGCTGGTGGCTAAA...CTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp CCTTCTCCTGATAGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAGAAGGAGGTCGCAGGTaGAGTATCCCGGCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PSPDRFLSLRPHQSQCWSEGGRR*SIPAPA
Trigger: AGCTGGCGCCGGGATACTGCACCTGCGACCTCCTTC...TGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCTATCAGGAGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CTCCTGATAGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGGAAGGAGGTCGCAGGTaGAGTATCCCGGCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: LLIGFCLFVLIRANAGQSEGGRR*SIPAPA
Trigger: AGCTGGCGCCGGGATACTGCACCTGCGACCTCCTTC...CGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCTATCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAACGAGCCACCCCCTTTaGCGGAGGCGCGTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTTSHPL*RRRVLP
Trigger: GGGGAGAACGCGCCTCCGGCAAAGGGGGTGGCTCGT...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGGTGAGCAGAGGAGGATaGAGGGGCAGAGCGGATTCC +
Preference number: 4 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKVSRGG*RGRADS
Trigger: GGAATCCGCTCTGCCCCTGCATCCTCCTCTGCTCAC...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGATGCCGTGAGCAGAGGAGGATaGAGGGGCAGAGCGGATTCC +
Preference number: 4 (lower is better)
Translates to: LSRSWNPSIDFAFCPRDAVSRGG*RGRADS
Trigger: GGAATCCGCTCTGCCCCTGCATCCTCCTCTGCTCAC...GGCATCCCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ATCACTTCACTGCCACCACCCCGGACAAGTAGGACTCGCTCTAGTCCCTCGGTAACTGGGTGGATCCAGTaGAACAGTTGCCAGCGAAGT +
Preference number: 4 (lower is better)
Translates to: ITSLPPPRTSRTRSSPSVTGWIQ*NSCQRS
Trigger: ACTTCGCTGGCAACTGTTGCACTGGATCCACCCAGT...TACCGAGGGACTAGAGCGAGTCCTACTTGTCCGGGGTGGTGGCAGTGAAGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCCTCTCTGTCTCGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCATCACTGTGAAAGATaGCAGCTCGGGGGACGATAT +
Preference number: 4 (lower is better)
Translates to: ASLSRSVLDSRMCRSIWDHHCER*QLGGRY
Trigger: ATATCGTCCCCCGAGCTGCCATCTTTCACAGTGATG...GTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCGAGACAGAGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TCTCGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCATTGGCTTTGCTGTaGCCAAAAACCCTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SRFTASSTSRVHAILPPQPLALL*PKTLRN
Trigger: GTTTCTGAGGGTTTTTGGCCACAGCAAAGCCAATGG...CTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCATGCCCTCTCTCAGCTTaGCGGCCACCACCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQACPLSA*RPPPAG
Trigger: GCCAGCTGGTGGTGGCCGCCAAGCTGAGAGAGGGCA...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTTGCCCTCTCTCAGCTTaGCGGCCACCACCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SGRMLSRSWNPSIDFAFCCPLSA*RPPPAG
Trigger: GCCAGCTGGTGGTGGCCGCCAAGCTGAGAGAGGGCA...ACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCTGCCCTCTCTCAGCTTaGCGGCCACCACCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFCPLSA*RPPPAG
Trigger: GCCAGCTGGTGGTGGCCGCCAAGCTGAGAGAGGGCA...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAATGTGCCGGAGCATCTaGGACCTTTGTTCCATCATC +
Preference number: 4 (lower is better)
Translates to: GGTRIGGILGPQESEATEMCRSI*DLCSII
Trigger: GATGATGGAACAAAGGTCCCAGATGCTCCGGCACAT...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGGACGGCCACGCAGGCTaGCCTGACTGGGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVDGHAG*PDWAAG
Trigger: CCCTGCTGCCCAGTCAGGCCAGCCTGCGTGGCCGTC...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTGACGGCCACGCAGGCTaGCCTGACTGGGCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASDGHAG*PDWAAG
Trigger: CCCTGCTGCCCAGTCAGGCCAGCCTGCGTGGCCGTC...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CCTCACATTGGACTGGTCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATAAGGTCCTCGGGGTCTaGGAGGAGGTTAGCGGATCA +
Preference number: 4 (lower is better)
Translates to: PHIGLVRTHVKQVLESFHKVLGV*EEVSGS
Trigger: TGATCCGCTAACCTCCTCCCAGACCCCGAGGACCTT...ATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGACCAGTCCAATGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTCTCCGAGAGGTCGGTaGGGGTGGCGCGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVSPRGR*GWRARS
Trigger: AGAGCGGGCGCGCCACCCCCACCGACCTCTCGGAGA...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCCTCTCTGTCTCGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACTCCACTTGGGTCTGGTaGGAAAGGTGCACATGCATA +
Preference number: 4 (lower is better)
Translates to: ASLSRSVLDSRMCRSIWDSTWVW*ERCTCI
Trigger: TATGCATGTGCACCTTTCCCACCAGACCCAAGTGGA...GTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCGAGACAGAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTAGTGCGTCATCACTGTaGAAGATGGCAGCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGSASSL*KMAARG
Trigger: CCCCCGAGCTGCCATCTTTCACAGTGATGACGCACT...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAGTGCGTCATCACTGTaGAAGATGGCAGCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKSASSL*KMAARG
Trigger: CCCCCGAGCTGCCATCTTTCACAGTGATGACGCACT...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCCTCGGTGCACCTGTaGGGCTCTGAAGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQASVHL*GSEVQP
Trigger: GGGCTGGACTTCAGAGCCTCACAGGTGCACCGAGGC...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AAAAGACTTAAGATCCTATCCGCTTTGCCATCCTCAGTGGGCCTGGAGGTTGAACAAACCGGGCTGCACTaGGGGACAGCCCACGGATAC +
Preference number: 4 (lower is better)
Translates to: KRLKILSALPSSVGLEVEQTGLH*GTAHGY
Trigger: GTATCCGTGGGCTGTCCCTCAGTGCAGCCCGGTTTG...TTCAACCTCCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTTAAGTCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp TTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGATGCCTCCTGCTTTGAGCTGTaGGGCAAAGGTGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: LSRSWNPSIDFAFCPRDASCFEL*GKGEEA
Trigger: CGCCTCCTCACCTTTGCCTCACAGCTCAAAGCAGGA...GGCATCCCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGGGCCACATGACTGGATaGGGTGGGAAATGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKGHMTG*GGKCPL
Trigger: GAGAGGGCATTTCCCACCTCATCCAGTCATGTGGCC...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCATCATCAAAGTGCGCTCGCTGGAATCCTTCCATTaGCTTCGCTTTTTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: SRMCRSIWDLCSIIKVRSLESFH*LRFLSP
Trigger: CGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAG...CGAGCGCACTTTGATGATGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAACACAGGCTTCTAGTTaGGTGGGAGTGGTAGTAATG +
Preference number: 4 (lower is better)
Translates to: GGTRIGGILGPQESEATETQASS*VGVVVM
Trigger: CATTACTACCACTCCCACTCAACTAGAAGCCTGTGT...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCAGGTTTCTCCTGCGTGTaGCAGGACGAGCCACCCCCT +
Preference number: 4 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQAGFSCV*QDEPPP
Trigger: AGGGGGTGGCTCGTCCTGTCACACGCAGGAGAAACC...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTGACTCAGGTCCTCGATaGCATCCTGGGGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGDSGPR*HPGGEK
Trigger: CTTCTCACCCCCAGGATGTCATCGAGGACCTGAGTC...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGACTCAGGTCCTCGATaGCATCCTGGGGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: RMLSRSWNPSIDFAFCPRDSGPR*HPGGEK
Trigger: CTTCTCACCCCCAGGATGTCATCGAGGACCTGAGTC...CCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GACTGGTCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTCCGTGTTGTGCTTCATaGCCCCAAGGCCACATGACT +
Preference number: 4 (lower is better)
Translates to: DWSGRMLSRSWNPSIDFAPCCAS*PQGHMT
Trigger: AGTCATGTGGCCTTGGGGGCATGAAGCACAACACGG...AGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGACCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CCTCACATTGGACTGGTCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATATCACCACCGTGTTGTaGTTCATGCCCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: PHIGLVRTHVKQVLESFHITTVL*FMPPRP
Trigger: TGGCCTTGGGGGCATGAAGCACAACACGGTGGTGAT...ATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGACCAGTCCAATGTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAACCTCATCAGAGCCAATaGTGGTCAATCGTAGCATTG +
Preference number: 4 (lower is better)
Translates to: GGTRIGGILGPQESEATEPHQSQ*WSIVAL
Trigger: CAATGCTACGATTGACCAGCATTGGCTCTGATGAGG...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp GCCTCTCTGTCTCGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCCTCATCAGAGCCAATaGTGGTCAATCGTAGCATTG +
Preference number: 4 (lower is better)
Translates to: ASLSRSVLDSRMCRSIWDPHQSQ*WSIVAL
Trigger: CAATGCTACGATTGACCAGCATTGGCTCTGATGAGG...GTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCGAGACAGAGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCAGAAGGAGGTCGCAGGTaGAGTATCCCGGCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQAEGGRR*SIPAPA
Trigger: AGCTGGCGCCGGGATACTGCACCTGCGACCTCCTTC...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTACGAGCCACCCCCTTTaGCGGAGGCGCGTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVTSHPL*RRRVLP
Trigger: GGGGAGAACGCGCCTCCGGCAAAGGGGGTGGCTCGT...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTACGAGCCACCCCCTTTaGCGGAGGCGCGTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEATSHPL*RRRVLP
Trigger: GGGGAGAACGCGCCTCCGGCAAAGGGGGTGGCTCGT...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTACGAGCCACCCCCTTTaGCGGAGGCGCGTTCTCCCC +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASTSHPL*RRRVLP
Trigger: GGGGAGAACGCGCCTCCGGCAAAGGGGGTGGCTCGT...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGTCTGGTGGGAAAGGTaGACATGCATAACGGGAAAA +
Preference number: 4 (lower is better)
Translates to: GGTRIGGILGPQESEATEVWWER*TCITGK
Trigger: TTTTCCCGTTATGCATGTGCACCTTTCCCACCAGAC...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676379.1
CDS-3UTR GCA 90 bp TCTCCACCACTTCTACCTCCGCCTCAATGCGTAAGTGATATAGGAAGGTGGCTAGGGCTGAAGGCTCAGTaGCATGGTCTCAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: SPPLLPPPQCVSDIGRWLGLKAQ*HGLRAA
Trigger: TGCTGCCCTGAGACCATGGCACTGAGCCTTCAGCCC...TAGCCACCTTCCTATATCACTTACGCATTGAGGCGGAGGTAGAAGTGGTGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTATGTTAAGCAGGTCCTaGAATCCTTCCATTGACTTC +
Preference number: 4 (lower is better)
Translates to: RFTASSTSRVHAILPPQPMLSRS*NPSIDF
Trigger: GAAGTCAATGGAAGGATTCCAGGACCTGCTTAACAT...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp TCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGTCCCCGCATCCGCCTCACATTaGACTGGTCCGGACGCATGT +
Preference number: 4 (lower is better)
Translates to: SLGHRNLRQRKIYRVIVPASASH*TGPDAC
Trigger: ACATGCGTCCGGACCAGTCCAATGTGAGGCGGATGC...GGGGACGATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGGGGAACGAGGATTGGTaGGATCCTTGGGCCACAGGA +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARGNEDW*DPWATG
Trigger: TCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCC...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTAGAGGTCGGTGGGGGTaGCGCGCCCGCTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVRGRWG*RARSSP
Trigger: AGGAGAAGAGCGGGCGCGCCACCCCCACCGACCTCT...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGATGCCATGTACTTGTCTTTTAGAGGTCGGTGGGGGTaGCGCGCCCGCTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: NPSIDFAFCPRDAMYLSFRGRWG*RARSSP
Trigger: AGGAGAAGAGCGGGCGCGCCACCCCCACCGACCTCT...AAAAGACAAGTACATGGCATCCCGGGGACAAAAAGCGAAGTCAATGGAAGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACTCTCCGAGAGGTCGGTaGGGGTGGCGCGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYSPRGR*GWRARS
Trigger: AGAGCGGGCGCGCCACCCCCACCGACCTCTCGGAGA...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGCAGTTGCCAGCGAAGTaGTGGCCCCAGACATCTCAC +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARQLPAK*WPQTSH
Trigger: GTGAGATGTCTGGGGCCACCACTTCGCTGGCAACTG...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGGCCTCGGTGCACCTGTaGGGCTCTGAAGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVASVHL*GSEVQP
Trigger: GGGCTGGACTTCAGAGCCTCACAGGTGCACCGAGGC...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACAGCCTCGGTGCACCTGTaGGGCTCTGAAGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTASVHL*GSEVQP
Trigger: GGGCTGGACTTCAGAGCCTCACAGGTGCACCGAGGC...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCACAAACCGGGCTGCACTaGGGGACAGCCCACGGATAC +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSQTGLH*GTAHGY
Trigger: GTATCCGTGGGCTGTCCCTCAGTGCAGCCCGGTTTG...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATCCTGCTTTGAGCTGTaGGGCAAAGGTGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSSCFEL*GKGEEA
Trigger: CGCCTCCTCACCTTTGCCTCACAGCTCAAAGCAGGA...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCCGGGCATCTTCGCTTTaGCGCCAGCCATTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFRASSL*RQPLGQ
Trigger: CTGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCG...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCCTCTCTGTCTCGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACATTCTAATTTGCCTTTaGCTGCTCAGACGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: ASLSRSVLDSRMCRSIWDILICL*LLRRGL
Trigger: CAAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAAT...GTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCGAGACAGAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTAAGATTTCACATACTTaGAATTACTGCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: RFTASSTSRVHAILPPQPKISHT*NYCSAS
Trigger: GCTGGCTGAGCAGTAATTTCAAGTATGTGAAATCTT...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp CAGAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGGGTTTCTCCTGCGTGTaGCAGGACGAGCCACCCCCT +
Preference number: 4 (lower is better)
Translates to: QSQCWSIVALSFGLSPIVGFSCV*QDEPPP
Trigger: AGGGGGTGGCTCGTCCTGTCACACGCAGGAGAAACC...CACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTGGTTTCTCCTGCGTGTaGCAGGACGAGCCACCCCCT +
Preference number: 4 (lower is better)
Translates to: PMLVNRSIEFRSFTNCASGFSCV*QDEPPP
Trigger: AGGGGGTGGCTCGTCCTGTCACACGCAGGAGAAACC...AGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CTCGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCATTGTCGGTGTCACCATaGACCGAACTGAAGCCATCT +
Preference number: 4 (lower is better)
Translates to: LALFWIAACAGASGTFVPLSVSP*TELKPS
Trigger: AGATGGCTTCAGTTCGGTTCATGGTGACACCGACAA...TGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCATGACATCCTGGGGGTaGGAAGTCCGGTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIMTSWG*EVRSLG
Trigger: ACCCAGTGACCGGACTTCTCACCCCCAGGATGTCAT...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACAAAGCAAACCGGGCTaGACTGAGGGACAGCCCACG +
Preference number: 4 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQAQSKPG*TEGQPT
Trigger: CGTGGGCTGTCCCTCAGTGCAGCCCGGTTTGCTTTG...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCCGTGTTGTGCTTCATaGCCCCAAGGCCACATGACT +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGPCCAS*PQGHMT
Trigger: AGTCATGTGGCCTTGGGGGCATGAAGCACAACACGG...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTGTTAGCATGTTTAGGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAACCGTGTTGTGCTTCATaGCCCCAAGGCCACATGACT +
Preference number: 4 (lower is better)
Translates to: LLACLGGTRIGGILGPQEPCCAS*PQGHMT
Trigger: AGTCATGTGGCCTTGGGGGCATGAAGCACAACACGG...TTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCCTAAACATGCTAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGATCACCACCGTGTTGTaGTTCATGCCCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKITTVL*FMPPRP
Trigger: TGGCCTTGGGGGCATGAAGCACAACACGGTGGTGAT...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TCTCGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGGTTCCATCATCAAAGTaGGCTCGTAAGTATATGCTG +
Preference number: 4 (lower is better)
Translates to: SRFTASSTSRVHAILPPQVPSSK*ARKYML
Trigger: CAGCATATACTTACGAGCGCACTTTGATGATGGAAC...CTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTTTGGATAGCCGCATGTaGCGGAGCATCTGGGACCTT +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGLDSRM*RSIWDL
Trigger: AAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAA...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGTCCCCTTGGATAGCCGCATGTaGCGGAGCATCTGGGACCTT +
Preference number: 4 (lower is better)
Translates to: SLGHRNLRQRKIYRVIVPLDSRM*RSIWDL
Trigger: AAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAA...GGGGACGATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp AGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCATCATCAAAGTGCGCTCGGTCTTTCACCAATTGTaGCTCTCTGTCTCGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SRMCRSIWDLCSIIKVRSVFHQL*LSVSLC
Trigger: ACAGAGCGAGACAGAGAGGCACAATTGGTGAAAGAC...CGAGCGCACTTTGATGATGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCATCCTCGTTGAGTTTCACTaGTGTATGCATCCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: RSVLDSRMCRSIWDLCSILVEFH*CMHPPH
Trigger: GTGAGGCGGATGCATACAGCAGTGAAACTCAACGAG...GATGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp AAAAGACTTAAGATCCTATCCGCTTTGCCATCCTCAGTGGGCCTGGAGGTTGAAGCAATCCTGGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KRLKILSALPSSVGLEVEAILAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCCAGGATTGC...TTCAACCTCCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTTAAGTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTGCTGGAGTGCAGAGGTaGAATCCTGGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGAGVQR*NPGSLQ
Trigger: TTGCAGTGAGCCAGGATTGCACCTCTGCACTCCAGC...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR GCA 90 bp TTGTTAGCATGTTTAGGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAAGCTGGAGTGCAGAGGTaGAATCCTGGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: LLACLGGTRIGGILGPQEAGVQR*NPGSLQ
Trigger: TTGCAGTGAGCCAGGATTGCACCTCTGCACTCCAGC...TTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCCTAAACATGCTAACAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp TCTCGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCTGTCAAGCAGATGCTaGAGTTCAAACTTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: SRFTASSTSRVHAILPPQLSSRC*SSNFSF
Trigger: AAAGCTGAAGTTTGAACTGCAGCATCTGCTTGACAG...CTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp TCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCGTGAGCAGAGGAGGATaGAGGGGCAGAGCGGATTCC +
Preference number: 4 (lower is better)
Translates to: SSSEPMLVNRSIEFRSFTVSRGG*RGRADS
Trigger: GGAATCCGCTCTGCCCCTGCATCCTCCTCTGCTCAC...GGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTGATGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCATCCAGTGCAACAGTTaGCAGCGAAGTGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: VGSLGHRNLRQRKIYRVIIQCNS*QRSGGP
Trigger: GGGGCCACCACTTCGCTGGCAACTGTTGCACTGGAT...GATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACAAGAGAAGCCCGGGGGTaGAGTGAGAGGGCGGAACCG +
Preference number: 4 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTREARG*SERAEP
Trigger: CGGTTCCGCCCTCTCACTGCACCCCCGGGCTTCTCT...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397702.6
ENST00000558667.5
ENST00000561080.5
CDS-3UTR GCA 90 bp AAAAGACTTAAGATCCTATCCGCTTTGCCATCCTCAGTGGGCCTGGAGGTTGAAGGGCTGAAGGCTCAGTaGCATGGTCTCAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: KRLKILSALPSSVGLEVEGLKAQ*HGLRAA
Trigger: TGCTGCCCTGAGACCATGGCACTGAGCCTTCAGCCC...TTCAACCTCCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTTAAGTCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676379.1
CDS-3UTR CCA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATTGCCCTCTCTCAGCTTaGCGGCCACCACCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDCPLSA*RPPPAG
Trigger: GCCAGCTGGTGGTGGCCGCCAAGCTGAGAGAGGGCA...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGCCCTCTCTCAGCTTaGCGGCCACCACCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSCPLSA*RPPPAG
Trigger: GCCAGCTGGTGGTGGCCGCCAAGCTGAGAGAGGGCA...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGTGCCCTTTAAAAGATaGTCCAGTGCTTTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GGTRIGGILGPQESEATEVPFKR*SSAFRE
Trigger: TTCCCTGAAAGCACTGGACCATCTTTTAAAGGGCAC...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCTGACCTTTACAGTATaGGCCTTTAAGATACTGGAT +
Preference number: 4 (lower is better)
Translates to: RFTASSTSRVHAILPPQPLTFTV*AFKILD
Trigger: ATCCAGTATCTTAAAGGCCCATACTGTAAAGGTCAG...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp GGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGAAGCCATCTTGGTGGTaGTTTCTGGAGGATGCATTT +
Preference number: 4 (lower is better)
Translates to: GERGLVGSLGHRNLRQRKKPSWW*FLEDAF
Trigger: AAATGCATCCTCCAGAAACCACCACCAAGATGGCTT...CTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGAGTCCGGTCACTGGGTaGATCCAGTGCAACAGTTGC +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARSPVTG*IQCNSC
Trigger: GCAACTGTTGCACTGGATCCACCCAGTGACCGGACT...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTGAGAAGTCCGGTCACTaGGTGGATCCAGTGCAACAG +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGEKSGH*VDPVQQ
Trigger: CTGTTGCACTGGATCCACCCAGTGACCGGACTTCTC...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGGAGAAGTCCGGTCACTaGGTGGATCCAGTGCAACAG +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQAREKSGH*VDPVQQ
Trigger: CTGTTGCACTGGATCCACCCAGTGACCGGACTTCTC...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGAGAAGTCCGGTCACTaGGTGGATCCAGTGCAACAG +
Preference number: 4 (lower is better)
Translates to: RMLSRSWNPSIDFAFCPREKSGH*VDPVQQ
Trigger: CTGTTGCACTGGATCCACCCAGTGACCGGACTTCTC...CCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CCACCCCGGACAAGTAGGACTCGCTCTAGTCCCTCGGTAAGCACCTCTAGGAACCAGGCGACTATAGCGTaGATCAGATTGCTAAAAGGT +
Preference number: 4 (lower is better)
Translates to: PPRTSRTRSSPSVSTSRNQATIA*IRLLKG
Trigger: ACCTTTTAGCAATCTGATCCACGCTATAGTCGCCTG...GTTCCTAGAGGTGCTTACCGAGGGACTAGAGCGAGTCCTACTTGTCCGGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGAGTGCGTCATCACTGTaGAAGATGGCAGCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSESASSL*KMAARG
Trigger: CCCCCGAGCTGCCATCTTTCACAGTGATGACGCACT...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGCATCACAGGTGGCATTaGAAAATTGACTCGAGTTAC +
Preference number: 4 (lower is better)
Translates to: GERGLVGSLGHRNLRQRKHHRWH*KIDSSY
Trigger: GTAACTCGAGTCAATTTTTCAATGCCACCTGTGATG...CTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp GCCTCTCTGTCTCGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACTGCCCTGGATTGAAGTaGCGTTATTGTGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: ASLSRSVLDSRMCRSIWDCPGLK*RYCEQS
Trigger: ACTTTGTTCACAATAACGTCACTTCAATCCAGGGCA...GTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCGAGACAGAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ATCACTTCACTGCCACCACCCCGGACAAGTAGGACTCGCTCTAGTCCCTCGGTAAGGAATGCCCTGGATTaGAGTGACGTTATTGTGAAC +
Preference number: 4 (lower is better)
Translates to: ITSLPPPRTSRTRSSPSVRNALD*SDVIVN
Trigger: GTTCACAATAACGTCACTTCAATCCAGGGCATTCCT...TACCGAGGGACTAGAGCGAGTCCTACTTGTCCGGGGTGGTGGCAGTGAAGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGGCCTCGGTGCACCTGTaGGGCTCTGAAGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: FSVMTADQMGALLHRYLRASVHL*GSEVQP
Trigger: GGGCTGGACTTCAGAGCCTCACAGGTGCACCGAGGC...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CCTCACATTGGACTGGTCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATGATCCAGGGAGGCAATaGGTATTCCAAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: PHIGLVRTHVKQVLESFHDPGRQ*VFQALQ
Trigger: TTGCAGAGCTTGGAATACTCATTGCCTCCCTGGATC...ATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGACCAGTCCAATGTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGCAAACCGGGCTGCACTaGGGGACAGCCCACGGATAC +
Preference number: 4 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVQTGLH*GTAHGY
Trigger: GTATCCGTGGGCTGTCCCTCAGTGCAGCCCGGTTTG...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp GGTCAATGCCAATCTGTATGCCATTTTAGTAAAGTAGGTAAGGAGAGTAGCCGCCAAACCGGGCTGCACTaGGGGACAGCCCACGGATAC +
Preference number: 4 (lower is better)
Translates to: GQCQSVCHFSKVGKESSRQTGLH*GTAHGY
Trigger: GTATCCGTGGGCTGTCCCTCAGTGCAGCCCGGTTTG...GCGGCTACTCTCCTTACCTACTTTACTAAAATGGCATACAGATTGGCATTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTCAAACCGGGCTGCACTaGGGGACAGCCCACGGATAC +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVQTGLH*GTAHGY
Trigger: GTATCCGTGGGCTGTCCCTCAGTGCAGCCCGGTTTG...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGCAAACCGGGCTGCACTaGGGGACAGCCCACGGATAC +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVQTGLH*GTAHGY
Trigger: GTATCCGTGGGCTGTCCCTCAGTGCAGCCCGGTTTG...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTCAAACCGGGCTGCACTaGGGGACAGCCCACGGATAC +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASQTGLH*GTAHGY
Trigger: GTATCCGTGGGCTGTCCCTCAGTGCAGCCCGGTTTG...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGAGTAATACAAGCAACTaGGGCCTCCAGTTTTTAGTG +
Preference number: 4 (lower is better)
Translates to: GERGLVGSLGHRNLRQRKSNTSN*GLQFLV
Trigger: CACTAAAAACTGGAGGCCTCAGTTGCTTGTATTACT...CTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCATCCTGCTTTGAGCTGTaGGGCAAAGGTGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: TADQMGALLHRYLRLSSSSCFEL*GKGEEA
Trigger: CGCCTCCTCACCTTTGCCTCACAGCTCAAAGCAGGA...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGTCCTGCTTTGAGCTGTaGGGCAAAGGTGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSESCFEL*GKGEEA
Trigger: CGCCTCCTCACCTTTGCCTCACAGCTCAAAGCAGGA...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCAGGCCACATGACTGGATaGGGTGGGAAATGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQAGHMTG*GGKCPL
Trigger: GAGAGGGCATTTCCCACCTCATCCAGTCATGTGGCC...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGGGCCACATGACTGGATaGGGTGGGAAATGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSEGHMTG*GGKCPL
Trigger: GAGAGGGCATTTCCCACCTCATCCAGTCATGTGGCC...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTGGCCACATGACTGGATaGGGTGGGAAATGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: SGRMLSRSWNPSIDFAFCGHMTG*GGKCPL
Trigger: GAGAGGGCATTTCCCACCTCATCCAGTCATGTGGCC...ACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAACGGGCATCTTCGCTTTaGCGCCAGCCATTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQRASSL*RQPLGQ
Trigger: CTGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCG...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGCGGGCATCTTCGCTTTaGCGCCAGCCATTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: PLTAQTWLERLEHCSDVERASSL*RQPLGQ
Trigger: CTGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCG...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCGGGCATCTTCGCTTTaGCGCCAGCCATTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGRASSL*RQPLGQ
Trigger: CTGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCG...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCTCGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCAAATGAATAATTTGTaGCACCTAGGTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SRFTASSTSRVHAILPPQQMNNL*HLGQLA
Trigger: AGCAAGCTGACCTAGGTGTCACAAATTATTCATTTG...CTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp TCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGTCCCCGGAAGATATATAGAGTaGTCGTCCCCCTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: SLGHRNLRQRKIYRVIVPGRYIE*SSPCRR
Trigger: CCTTCGGCAGGGGGACGATCACTCTATATATCTTCC...GGGGACGATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp AGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGCTACTGAGAGAAGGGTaGGCAGAGGAGGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: RFLSLRPHQSQCWSIVALLLREG*AEEDAG
Trigger: CCCTGCATCCTCCTCTGCTCACCCTTCTCTCAGTAG...CAATGCTACGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCACCATGAACCGAACTaGAGCCATCTTGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGHHEPN*SHLGGG
Trigger: ACCACCACCAAGATGGCTTCAGTTCGGTTCATGGTG...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558667.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGCACCATGAACCGAACTaGAGCCATCTTGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKHHEPN*SHLGGG
Trigger: ACCACCACCAAGATGGCTTCAGTTCGGTTCATGGTG...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558667.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGTCCCCCACCATGAACCGAACTaGAGCCATCTTGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SLGHRNLRQRKIYRVIVPHHEPN*SHLGGG
Trigger: ACCACCACCAAGATGGCTTCAGTTCGGTTCATGGTG...GGGGACGATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCAATGACATCCTGGGGGTaGGAAGTCCGGTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQAMTSWG*EVRSLG
Trigger: ACCCAGTGACCGGACTTCTCACCCCCAGGATGTCAT...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCATGACATCCTGGGGGTaGGAAGTCCGGTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: EPMLVNRSIEFRSFTNCAMTSWG*EVRSLG
Trigger: ACCCAGTGACCGGACTTCTCACCCCCAGGATGTCAT...GGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCATGACATCCTGGGGGTaGGAAGTCCGGTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFMTSWG*EVRSLG
Trigger: ACCCAGTGACCGGACTTCTCACCCCCAGGATGTCAT...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTAGAGATCGAAGCCGCTaGCCCCTCCTCTGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVRDRSR*PLLWVL
Trigger: GAGGACCCAGAGGAGGGGGCAGCGGCTTCGATCTCT...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290209.9
CDS-3UTR GCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACACAAAGCAAACCGGGCTaGACTGAGGGACAGCCCACG +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTQSKPG*TEGQPT
Trigger: CGTGGGCTGTCCCTCAGTGCAGCCCGGTTTGCTTTG...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTCAAAGCAAACCGGGCTaGACTGAGGGACAGCCCACG +
Preference number: 4 (lower is better)
Translates to: PMLVNRSIEFRSFTNCASQSKPG*TEGQPT
Trigger: CGTGGGCTGTCCCTCAGTGCAGCCCGGTTTGCTTTG...AGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAACAAAGCAAACCGGGCTaGACTGAGGGACAGCCCACG +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQQSKPG*TEGQPT
Trigger: CGTGGGCTGTCCCTCAGTGCAGCCCGGTTTGCTTTG...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATCACTGTCATaGATCTCCACCACTTCTACC +
Preference number: 4 (lower is better)
Translates to: GGTRIGGILGPQESEATEDISLS*ISTTST
Trigger: GGTAGAAGTGGTGGAGATGCATGACAGTGATATATC...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTGGATAGCCGCATGTaGCGGAGCATCTGGGACCTT +
Preference number: 4 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSLDSRM*RSIWDL
Trigger: AAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAA...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CTCGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCAGTCTTTCACCAATTGTaGCTCTCTGTCTCGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LALFWIAACAGASGTFVPVFHQL*LSVSLC
Trigger: ACAGAGCGAGACAGAGAGGCACAATTGGTGAAAGAC...TGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CCTCACATTGGACTGGTCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATCTCGTTGAGTTTCACTaGTGTATGCATCCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: PHIGLVRTHVKQVLESFHLVEFH*CMHPPH
Trigger: GTGAGGCGGATGCATACAGCAGTGAAACTCAACGAG...ATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGACCAGTCCAATGTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTGTTAGCATGTTTAGGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAAGCTGGAGTGCAGTGGTaGAATCTCGGTTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: LLACLGGTRIGGILGPQEAGVQW*NLGSLQ
Trigger: TTGCAGTGAACCGAGATTGCACCACTGCACTCCAGC...TTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCCTAAACATGCTAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp GTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCAGATCCTATCCGCTTTaGCATCCTCAGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: VGSLGHRNLRQRKIYRVIRSYPL*HPQWAW
Trigger: CCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCT...GATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAACTGTCAAGCAGATGCTaGAGTTCAAACTTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: GGTRIGGILGPQESEATELSSRC*SSNFSF
Trigger: AAAGCTGAAGTTTGAACTGCAGCATCTGCTTGACAG...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGAAGGAGGTCGCAGGTaGAGTATCCCGGCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDEGGRR*SIPAPA
Trigger: AGCTGGCGCCGGGATACTGCACCTGCGACCTCCTTC...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGTGAGCAGAGGAGGATaGAGGGGCAGAGCGGATTCC +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSVSRGG*RGRADS
Trigger: GGAATCCGCTCTGCCCCTGCATCCTCCTCTGCTCAC...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCATCCAGTGCAACAGTTaGCAGCGAAGTGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: EPMLVNRSIEFRSFTNCAIQCNS*QRSGGP
Trigger: GGGGCCACCACTTCGCTGGCAACTGTTGCACTGGAT...GGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAATCCAGTGCAACAGTTaGCAGCGAAGTGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: TADQMGALLHRYLRLSSSIQCNS*QRSGGP
Trigger: GGGGCCACCACTTCGCTGGCAACTGTTGCACTGGAT...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGACTGGGTGGATCCAGTaGAACAGTTGCCAGCGAAGT +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARTGWIQ*NSCQRS
Trigger: ACTTCGCTGGCAACTGTTGCACTGGATCCACCCAGT...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGTCCCCACTGGGTGGATCCAGTaGAACAGTTGCCAGCGAAGT +
Preference number: 4 (lower is better)
Translates to: SLGHRNLRQRKIYRVIVPTGWIQ*NSCQRS
Trigger: ACTTCGCTGGCAACTGTTGCACTGGATCCACCCAGT...GGGGACGATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGAGAAGCCCGGGGGTaGAGTGAGAGGGCGGAACCG +
Preference number: 4 (lower is better)
Translates to: AFSVMTADQMGALLHRYLREARG*SERAEP
Trigger: CGGTTCCGCCCTCTCACTGCACCCCCGGGCTTCTCT...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000397702.6
ENST00000561080.5
CDS-3UTR GCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAGAAGCCCGGGGGTaGAGTGAGAGGGCGGAACCG +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYREARG*SERAEP
Trigger: CGGTTCCGCCCTCTCACTGCACCCCCGGGCTTCTCT...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397702.6
ENST00000558667.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CTCCTGATAGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGATTCGAGGTGAACCTTaGGAAGAGAAGCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: LLIGFCLFVLIRANAGQSIRGEP*EEKPGG
Trigger: ACCCCCGGGCTTCTCTTCGCAAGGTTCACCTCGAAT...CGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCTATCAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAACGCTGCCCCCTCCTCTaGGTCCTCTACCTTAGTCAC +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQRCPLL*VLYLSH
Trigger: GTGACTAAGGTAGAGGACCCAGAGGAGGGGGCAGCG...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000290209.9
CDS-3UTR CCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCCGTCGTCTAACAGTTaGCTGTGTTCCCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGPSSNS*LCSPVM
Trigger: CATCACAGGGGAACACAGCCAACTGTTAGACGACGG...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGATGAAGGTACCCATTTaGGGGGTCTTGGTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARMKVPI*GVLVGF
Trigger: GAAGCCCACCAAGACCCCCCAAATGGGTACCTTCAT...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCCTCTCTGTCTCGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACTGGCTGCTGCAAATGTaGTACCAAGATAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: ASLSRSVLDSRMCRSIWDWLLQM*YQDKSR
Trigger: TCTGCTTTTATCTTGGTACCACATTTGCAGCAGCCA...GTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCGAGACAGAGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAATGGCTGCTGCAAATGTaGTACCAAGATAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: GGTRIGGILGPQESEATEWLLQM*YQDKSR
Trigger: TCTGCTTTTATCTTGGTACCACATTTGCAGCAGCCA...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACTGCCCTCTCTCAGCTTaGCGGCCACCACCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYCPLSA*RPPPAG
Trigger: GCCAGCTGGTGGTGGCCGCCAAGCTGAGAGAGGGCA...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGACCAGCAGTGCAAGATaGGCAGCAGTTGTCACTCGA +
Preference number: 4 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKTSSAR*AAVVTR
Trigger: TCGAGTGACAACTGCTGCCCATCTTGCACTGCTGGT...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CCA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGTGTCTCGCTCTGTTTTaGATAGCCGCATGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKCLALF*IAACAG
Trigger: TCCGGCACATGCGGCTATCCAAAACAGAGCGAGACA...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTGTCTCGCTCTGTTTTaGATAGCCGCATGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARCLALF*IAACAG
Trigger: TCCGGCACATGCGGCTATCCAAAACAGAGCGAGACA...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAATGTTAAGCAGGTCCTaGAATCCTTCCATTGACTTC +
Preference number: 4 (lower is better)
Translates to: GGTRIGGILGPQESEATEMLSRS*NPSIDF
Trigger: GAAGTCAATGGAAGGATTCCAGGACCTGCTTAACAT...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAGCATCCGCCTCACATTaGACTGGTCCGGACGCATGT +
Preference number: 4 (lower is better)
Translates to: TADQMGALLHRYLRLSSSASASH*TGPDAC
Trigger: ACATGCGTCCGGACCAGTCCAATGTGAGGCGGATGC...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGGCATCCGCCTCACATTaGACTGGTCCGGACGCATGT +
Preference number: 4 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSEASASH*TGPDAC
Trigger: ACATGCGTCCGGACCAGTCCAATGTGAGGCGGATGC...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTGCAGAGGTGCAATCCTaGCTCACTGCAACCTCCGCC +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGAEVQS*LTATSA
Trigger: GGCGGAGGTTGCAGTGAGCCAGGATTGCACCTCTGC...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCTTTGCCATCCTCAGTaGGCCTGGAGGTTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGLCHPQ*AWRLKQ
Trigger: TTGCTTCAACCTCCAGGCCCACTGAGGATGGCAAAG...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp TCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAAGGTCCTCGGGGTCTaGGAGGAGGTTAGCGGATCA +
Preference number: 4 (lower is better)
Translates to: SSSEPMLVNRSIEFRSFTKVLGV*EEVSGS
Trigger: TGATCCGCTAACCTCCTCCCAGACCCCGAGGACCTT...GGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTGATGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATTCTCCGAGAGGTCGGTaGGGGTGGCGCGCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHSPRGR*GWRARS
Trigger: AGAGCGGGCGCGCCACCCCCACCGACCTCTCGGAGA...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGATGCCTGTCGACAATCCACTTaGGTCTGGTGGGAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: LSRSWNPSIDFAFCPRDACRQST*VWWERC
Trigger: GCACCTTTCCCACCAGACCCAAGTGGATTGTCGACA...GGCATCCCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGTCCCCTGTCGACAATCCACTTaGGTCTGGTGGGAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: SLGHRNLRQRKIYRVIVPCRQST*VWWERC
Trigger: GCACCTTTCCCACCAGACCCAAGTGGATTGTCGACA...GGGGACGATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676379.1
CDS-3UTR TCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCGGAAATCATAAAGTATaGGCCCCCAGCTGGCACCAC +
Preference number: 4 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIGNHKV*APSWHH
Trigger: GTGGTGCCAGCTGGGGGCTCATACTTTATGATTTCC...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCAGGAAATCATAAAGTATaGGCCCCCAGCTGGCACCAC +
Preference number: 4 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSGNHKV*APSWHH
Trigger: GTGGTGCCAGCTGGGGGCTCATACTTTATGATTTCC...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTTGGCTGCTGATTCCTTaGGTGCGTCATCACTGTGAA +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGWLLIP*VRHHCE
Trigger: TTCACAGTGATGACGCACTCAAGGAATCAGCAGCCA...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCCAAGATGGACACAATaGCACAGGCCAGGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGPRWTQ*HRPGKV
Trigger: CACTTTTCCTGGCCTGTGTCATTGTGTCCATCTTGG...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGCCAAGATGGACACAATaGCACAGGCCAGGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARPRWTQ*HRPGKV
Trigger: CACTTTTCCTGGCCTGTGTCATTGTGTCCATCTTGG...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCTCGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGGAAGTGACGTTATTGTaGACAAAGTATTCATCACAG +
Preference number: 4 (lower is better)
Translates to: SRFTASSTSRVHAILPPQEVTLL*TKYSSQ
Trigger: CTGTGATGAATACTTTGTTCACAATAACGTCACTTC...CTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp CTCGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCAAGGAATGCCCTGGATTaGAGTGACGTTATTGTGAAC +
Preference number: 4 (lower is better)
Translates to: LALFWIAACAGASGTFVPRNALD*SDVIVN
Trigger: GTTCACAATAACGTCACTTCAATCCAGGGCATTCCT...TGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGTCCCCCTGAAGGCTTTTCGATaGTCTCTCCCTTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: SLGHRNLRQRKIYRVIVPLKAFR*SLPWVG
Trigger: ACCTACCCAAGGGAGAGATCATCGAAAAGCCTTCAG...GGGGACGATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCTGAAGGCTTTTCGATaGTCTCTCCCTTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGLKAFR*SLPWVG
Trigger: ACCTACCCAAGGGAGAGATCATCGAAAAGCCTTCAG...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGCTGAAGGCTTTTCGATaGTCTCTCCCTTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARLKAFR*SLPWVG
Trigger: ACCTACCCAAGGGAGAGATCATCGAAAAGCCTTCAG...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GACTGGTCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTCACCGAACTTGTCTCTaGGAACAACCCCTTCAATAC +
Preference number: 4 (lower is better)
Translates to: DWSGRMLSRSWNPSIDFAHRTCL*EQPLQY
Trigger: GTATTGAAGGGGTTGTTCTCAGAGACAAGTTCGGTG...AGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGACCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGGATCCAGGGAGGCAATaGGTATTCCAAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKDPGRQ*VFQALQ
Trigger: TTGCAGAGCTTGGAATACTCATTGCCTCCCTGGATC...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CAGAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGTCCTGCTTTGAGCTGTaGGGCAAAGGTGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: QSQCWSIVALSFGLSPIVSCFEL*GKGEEA
Trigger: CGCCTCCTCACCTTTGCCTCACAGCTCAAAGCAGGA...CACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGGCCACATGACTGGATaGGGTGGGAAATGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSGHMTG*GGKCPL
Trigger: GAGAGGGCATTTCCCACCTCATCCAGTCATGTGGCC...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGCCACATGACTGGATaGGGTGGGAAATGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTGHMTG*GGKCPL
Trigger: GAGAGGGCATTTCCCACCTCATCCAGTCATGTGGCC...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATCGGGCATCTTCGCTTTaGCGCCAGCCATTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDRASSL*RQPLGQ
Trigger: CTGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCG...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTCGGGCATCTTCGCTTTaGCGCCAGCCATTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASRASSL*RQPLGQ
Trigger: CTGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCG...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCGGGCATCTTCGCTTTaGCGCCAGCCATTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEARASSL*RQPLGQ
Trigger: CTGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCG...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGGCCTCAATGCGTAAGTaGTATAGGAAGGTGGCTAGG +
Preference number: 4 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKASMRK*YRKVAR
Trigger: CCTAGCCACCTTCCTATATCACTTACGCATTGAGGC...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGTCCCCCTGGAATCCTTCCATTaGCTTCGCTTTTTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: SLGHRNLRQRKIYRVIVPLESFH*LRFLSP
Trigger: CGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAG...GGGGACGATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTTTGTCGGTGTCACCATaGACCGAACTGAAGCCATCT +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGLSVSP*TELKPS
Trigger: AGATGGCTTCAGTTCGGTTCATGGTGACACCGACAA...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558667.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGAGTGACTCAGGTCCTCGATaGCATCCTGGGGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: FLSLRPHQSQCWSIVALSDSGPR*HPGGEK
Trigger: CTTCTCACCCCCAGGATGTCATCGAGGACCTGAGTC...ACTCAATGCTACGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCCCTGTGATGGAGTTCTaGCTCAGGTCCTCGATGACA +
Preference number: 4 (lower is better)
Translates to: VGSLGHRNLRQRKIYRVIPVMEF*LRSSMT
Trigger: TGTCATCGAGGACCTGAGTCAGAACTCCATCACAGG...GATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGTCCGTCGTCCTCGATaGCATCCTGGGGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVVRRPR*HPGGEK
Trigger: CTTCTCACCCCCAGGATGTCATCGAGGACGACGGAC...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397707.6
CDS-3UTR TCA 90 bp TTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGATGCCTCTGACAAACACTACTaGGAGAAGGGTGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LSRSWNPSIDFAFCPRDASDKHY*EKGEQR
Trigger: CCTCTGCTCACCCTTCTCTCAGTAGTGTTTGTCAGA...GGCATCCCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000559523.5
CDS-3UTR TCA 90 bp CGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGAATAACCCACACTACTaGGAGAAGGGTGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RMLSRSWNPSIDFAFCPRNNPHY*EKGEQR
Trigger: CCTCTGCTCACCCTTCTCTCAGTAGTGTGGGTTATT...CCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGTCCCCAATAACCCACACTACTaGGAGAAGGGTGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: SLGHRNLRQRKIYRVIVPNNPHY*EKGEQR
Trigger: CCTCTGCTCACCCTTCTCTCAGTAGTGTGGGTTATT...GGGGACGATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676379.1
CDS-3UTR GCA 90 bp CCACCCCGGACAAGTAGGACTCGCTCTAGTCCCTCGGTAAGCACCTCTAGGAACTTCAGTGATGTTTTCTaGCTCTTCATGTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: PPRTSRTRSSPSVSTSRNFSDVF*LFMFLC
Trigger: GCAAAGGAACATGAAGAGGCAGAAAACATCACTGAA...GTTCCTAGAGGTGCTTACCGAGGGACTAGAGCGAGTCCTACTTGTCCGGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGGTCTTGATGAAAGGGTaGGGTTACCCAGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKVLMKG*GYPACR
Trigger: TCTGCATGCTGGGTAACCGCACCCTTTCATCAAGAC...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGGTTCCCCATTGGCTTTaGTGTGGCCAAAAACCCTCA +
Preference number: 4 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKVPHWL*CGQKPS
Trigger: TGAGGGTTTTTGGCCACAGCAAAGCCAATGGGGAAC...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGGTTCCCCATTGGCTTTaGTGTGGCCAAAAACCCTCA +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARVPHWL*CGQKPS
Trigger: TGAGGGTTTTTGGCCACAGCAAAGCCAATGGGGAAC...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATCAAAGCAAACCGGGCTaGACTGAGGGACAGCCCACG +
Preference number: 4 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYQSKPG*TEGQPT
Trigger: CGTGGGCTGTCCCTCAGTGCAGCCCGGTTTGCTTTG...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTCAAAGCAAACCGGGCTaGACTGAGGGACAGCCCACG +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVQSKPG*TEGQPT
Trigger: CGTGGGCTGTCCCTCAGTGCAGCCCGGTTTGCTTTG...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAAAGCAAACCGGGCTaGACTGAGGGACAGCCCACG +
Preference number: 4 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTQSKPG*TEGQPT
Trigger: CGTGGGCTGTCCCTCAGTGCAGCCCGGTTTGCTTTG...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCACCGTGTTGTGCTTCATaGCCCCAAGGCCACATGACT +
Preference number: 4 (lower is better)
Translates to: TADQMGALLHRYLRLSSSPCCAS*PQGHMT
Trigger: AGTCATGTGGCCTTGGGGGCATGAAGCACAACACGG...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCCCGTGTTGTGCTTCATaGCCCCAAGGCCACATGACT +
Preference number: 4 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFPCCAS*PQGHMT
Trigger: AGTCATGTGGCCTTGGGGGCATGAAGCACAACACGG...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACCGTGTTGTGCTTCATaGCCCCAAGGCCACATGACT +
Preference number: 4 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQAPCCAS*PQGHMT
Trigger: AGTCATGTGGCCTTGGGGGCATGAAGCACAACACGG...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAATCACCACCGTGTTGTaGTTCATGCCCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: TADQMGALLHRYLRLSSSITTVL*FMPPRP
Trigger: TGGCCTTGGGGGCATGAAGCACAACACGGTGGTGAT...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp AAAAGACTTAAGATCCTATCCGCTTTGCCATCCTCAGTGGGCCTGGAGGTTGAAATCACCACCGTGTTGTaGTTCATGCCCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: KRLKILSALPSSVGLEVEITTVL*FMPPRP
Trigger: TGGCCTTGGGGGCATGAAGCACAACACGGTGGTGAT...TTCAACCTCCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTTAAGTCTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp TCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTTTGGATAGCCGCATGTaGCGGAGCATCTGGGACCTT +
Preference number: 4 (lower is better)
Translates to: SGRMLSRSWNPSIDFAFCLDSRM*RSIWDL
Trigger: AAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAA...ACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGCTCGTTGAGTTTCACTaGTGTATGCATCCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARLVEFH*CMHPPH
Trigger: GTGAGGCGGATGCATACAGCAGTGAAACTCAACGAG...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCCAAGACACCTCGGACTaGAGCTCAGAGTCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFQDTSD*SSESWQ
Trigger: TTGCCACGACTCTGAGCTGCAGTCCGAGGTGTCTTG...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp AATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGATGCCATGTACTTGTCTTTTGTGAGCAGAGGAGGATaGAGGGGCAGAGCGGATTCC +
Preference number: 4 (lower is better)
Translates to: NPSIDFAFCPRDAMYLSFVSRGG*RGRADS
Trigger: GGAATCCGCTCTGCCCCTGCATCCTCCTCTGCTCAC...AAAAGACAAGTACATGGCATCCCGGGGACAAAAAGCGAAGTCAATGGAAGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAATCCAGTGCAACAGTTaGCAGCGAAGTGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTIQCNS*QRSGGP
Trigger: GGGGCCACCACTTCGCTGGCAACTGTTGCACTGGAT...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTATCCAGTGCAACAGTTaGCAGCGAAGTGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGIQCNS*QRSGGP
Trigger: GGGGCCACCACTTCGCTGGCAACTGTTGCACTGGAT...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CCTCACATTGGACTGGTCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATTCTAGTTGGGCGAAGTaGGTGCAGGCAAACCTTTAT +
Preference number: 4 (lower is better)
Translates to: PHIGLVRTHVKQVLESFHSSWAK*VQANLY
Trigger: ATAAAGGTTTGCCTGCACGCACTTCGCCCAACTAGA...ATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGACCAGTCCAATGTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTGGGCTGAAGGCTCAGTaGCATGGTCTCAGGGCAGCA +
Preference number: 4 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSGLKAQ*HGLRAA
Trigger: TGCTGCCCTGAGACCATGGCACTGAGCCTTCAGCCC...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CTCGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCAAAGACACCTTCGGTCTaGTGTCCATTTCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LALFWIAACAGASGTFVPKTPSV*CPFLPQ
Trigger: TTGAGGAAGAAATGGACACCAGACCGAAGGTGTCTT...TGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCATGAAGGTACCCATTTaGGGGGTCTTGGTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIMKVPI*GVLVGF
Trigger: GAAGCCCACCAAGACCCCCCAAATGGGTACCTTCAT...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CTCCTGATAGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGATGAAGGTACCCATTTaGGGGGTCTTGGTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LLIGFCLFVLIRANAGQSMKVPI*GVLVGF
Trigger: GAAGCCCACCAAGACCCCCCAAATGGGTACCTTCAT...CGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCTATCAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCACCAGCAGTGCAAGATaGGCAGCAGTTGTCACTCGA +
Preference number: 4 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLITSSAR*AAVVTR
Trigger: TCGAGTGACAACTGCTGCCCATCTTGCACTGCTGGT...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CCA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGATGTGCCGGAGCATCTaGGACCTTTGTTCCATCATC +
Preference number: 4 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKMCRSI*DLCSII
Trigger: GATGATGGAACAAAGGTCCCAGATGCTCCGGCACAT...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGATGTGCCGGAGCATCTaGGACCTTTGTTCCATCATC +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARMCRSI*DLCSII
Trigger: GATGATGGAACAAAGGTCCCAGATGCTCCGGCACAT...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGCATCCGCCTCACATTaGACTGGTCCGGACGCATGT +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTASASH*TGPDAC
Trigger: ACATGCGTCCGGACCAGTCCAATGTGAGGCGGATGC...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCATCCGCCTCACATTaGACTGGTCCGGACGCATGT +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQASASH*TGPDAC
Trigger: ACATGCGTCCGGACCAGTCCAATGTGAGGCGGATGC...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CAGAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGGCATCCGCCTCACATTaGACTGGTCCGGACGCATGT +
Preference number: 4 (lower is better)
Translates to: QSQCWSIVALSFGLSPIVASASH*TGPDAC
Trigger: ACATGCGTCCGGACCAGTCCAATGTGAGGCGGATGC...CACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTGCATCCGCCTCACATTaGACTGGTCCGGACGCATGT +
Preference number: 4 (lower is better)
Translates to: PMLVNRSIEFRSFTNCASASASH*TGPDAC
Trigger: ACATGCGTCCGGACCAGTCCAATGTGAGGCGGATGC...AGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCCTCTCTGTCTCGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACACCAGCTTTGCTTCATaGGACTTGTTAACTATAACC +
Preference number: 4 (lower is better)
Translates to: ASLSRSVLDSRMCRSIWDTSFAS*DLLTIT
Trigger: GGTTATAGTTAACAAGTCCCATGAAGCAAAGCTGGT...GTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCGAGACAGAGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGGTGGTAGTAATGAGCTaGCACTTCCATGGAGGACGT +
Preference number: 4 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKVVVMS*HFHGGR
Trigger: ACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGATGCCGTGGTAGTAATGAGCTaGCACTTCCATGGAGGACGT +
Preference number: 4 (lower is better)
Translates to: LSRSWNPSIDFAFCPRDAVVVMS*HFHGGR
Trigger: ACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC...GGCATCCCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGGCAGAGGTGCAATCCTaGCTCACTGCAACCTCCGCC +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVAEVQS*LTATSA
Trigger: GGCGGAGGTTGCAGTGAGCCAGGATTGCACCTCTGC...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTACACAAGTATTTCCTTaGCACACTGAACTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: RFTASSTSRVHAILPPQPTQVFP*HTELSF
Trigger: AAAAGAAAGTTCAGTGTGCCAAGGAAATACTTGTGT...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp GGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGCTGACCTTTACAGTATaGGCCTTTAAGATACTGGAT +
Preference number: 4 (lower is better)
Translates to: GERGLVGSLGHRNLRQRKLTFTV*AFKILD
Trigger: ATCCAGTATCTTAAAGGCCCATACTGTAAAGGTCAG...CTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp CCGGAGCATCTGGGACCTTTGTTCCATCATCAAAGTGCGCTCGTAAGTATATGCTGCAGCTCAGAGTCGTaGCAAGTCGTAGCTAGTCCA +
Preference number: 4 (lower is better)
Translates to: PEHLGPLFHHQSALVSICCSSES*QVVASP
Trigger: TGGACTAGCTACGACTTGCCACGACTCTGAGCTGCA...GCATATACTTACGAGCGCACTTTGATGATGGAACAAAGGTCCCAGATGCTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTAAGGTCCTCGGGGTCTaGGAGGAGGTTAGCGGATCA +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGKVLGV*EEVSGS
Trigger: TGATCCGCTAACCTCCTCCCAGACCCCGAGGACCTT...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CAGAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGAAGGTCCTCGGGGTCTaGGAGGAGGTTAGCGGATCA +
Preference number: 4 (lower is better)
Translates to: QSQCWSIVALSFGLSPIVKVLGV*EEVSGS
Trigger: TGATCCGCTAACCTCCTCCCAGACCCCGAGGACCTT...CACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATAGAGGTCGGTGGGGGTaGCGCGCCCGCTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHRGRWG*RARSSP
Trigger: AGGAGAAGAGCGGGCGCGCCACCCCCACCGACCTCT...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGATGCCCTGAAGCCATCTTGGTaGTGGTTTCTGGAGGATGCA +
Preference number: 4 (lower is better)
Translates to: LSRSWNPSIDFAFCPRDALKPSW*WFLEDA
Trigger: TGCATCCTCCAGAAACCACCACCAAGATGGCTTCAG...GGCATCCCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCATTGCCAGCGAAGTGGTaGCCCCAGACATCTCACTCA +
Preference number: 4 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQALPAKW*PQTSHS
Trigger: TGAGTGAGATGTCTGGGGCCACCACTTCGCTGGCAA...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGTTGCCAGCGAAGTGGTaGCCCCAGACATCTCACTCA +
Preference number: 4 (lower is better)
Translates to: RFLSLRPHQSQCWSIVALLPAKW*PQTSHS
Trigger: TGAGTGAGATGTCTGGGGCCACCACTTCGCTGGCAA...CAATGCTACGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCACAGTTGCCAGCGAAGTaGTGGCCCCAGACATCTCAC +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSQLPAK*WPQTSH
Trigger: GTGAGATGTCTGGGGCCACCACTTCGCTGGCAACTG...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAGTTGCCAGCGAAGTaGTGGCCCCAGACATCTCAC +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGQLPAK*WPQTSH
Trigger: GTGAGATGTCTGGGGCCACCACTTCGCTGGCAACTG...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTCAGTTGCCAGCGAAGTaGTGGCCCCAGACATCTCAC +
Preference number: 4 (lower is better)
Translates to: PMLVNRSIEFRSFTNCASQLPAK*WPQTSH
Trigger: GTGAGATGTCTGGGGCCACCACTTCGCTGGCAACTG...AGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTGAGAAGTCCGGTCACTaGGTGGATCCAGTGCAACAG +
Preference number: 4 (lower is better)
Translates to: SGRMLSRSWNPSIDFAFCEKSGH*VDPVQQ
Trigger: CTGTTGCACTGGATCCACCCAGTGACCGGACTTCTC...ACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCAACAATTGCAAAAGCCTaGAGAACTCCAGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSTIAKA*RTPAVP
Trigger: GGGCACAGCTGGAGTTCTTCAGGCTTTTGCAATTGT...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AAAAGACTTAAGATCCTATCCGCTTTGCCATCCTCAGTGGGCCTGGAGGTTGAAGGAAATCATAAAGTATaGGCCCCCAGCTGGCACCAC +
Preference number: 4 (lower is better)
Translates to: KRLKILSALPSSVGLEVEGNHKV*APSWHH
Trigger: GTGGTGCCAGCTGGGGGCTCATACTTTATGATTTCC...TTCAACCTCCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTTAAGTCTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTGCGTCATCACTGTaGAAGATGGCAGCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASSASSL*KMAARG
Trigger: CCCCCGAGCTGCCATCTTTCACAGTGATGACGCACT...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCTGGCTGCTGATTCCTTaGGTGCGTCATCACTGTGAA +
Preference number: 4 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIWLLIP*VRHHCE
Trigger: TTCACAGTGATGACGCACTCAAGGAATCAGCAGCCA...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CTCCTGATAGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGTGGCTGCTGATTCCTTaGGTGCGTCATCACTGTGAA +
Preference number: 4 (lower is better)
Translates to: LLIGFCLFVLIRANAGQSWLLIP*VRHHCE
Trigger: TTCACAGTGATGACGCACTCAAGGAATCAGCAGCCA...CGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCTATCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCCCAAGATGGACACAATaGCACAGGCCAGGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIPRWTQ*HRPGKV
Trigger: CACTTTTCCTGGCCTGTGTCATTGTGTCCATCTTGG...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCTCCACCACTTCTACCTCCGCCTCAATGCGTAAGTGATATAGGAAGGTGGCTACCAAGATGGACACAATaGCACAGGCCAGGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: SPPLLPPPQCVSDIGRWLPRWTQ*HRPGKV
Trigger: CACTTTTCCTGGCCTGTGTCATTGTGTCCATCTTGG...TAGCCACCTTCCTATATCACTTACGCATTGAGGCGGAGGTAGAAGTGGTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGCACCGAACTTGTCTCTaGGAACAACCCCTTCAATAC +
Preference number: 4 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKHRTCL*EQPLQY
Trigger: GTATTGAAGGGGTTGTTCTCAGAGACAAGTTCGGTG...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGCACCGAACTTGTCTCTaGGAACAACCCCTTCAATAC +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARHRTCL*EQPLQY
Trigger: GTATTGAAGGGGTTGTTCTCAGAGACAAGTTCGGTG...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCACCGAACTTGTCTCTaGGAACAACCCCTTCAATAC +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGHRTCL*EQPLQY
Trigger: GTATTGAAGGGGTTGTTCTCAGAGACAAGTTCGGTG...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGGCCTCGGTGCACCTGTaGGGCTCTGAAGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRASVHL*GSEVQP
Trigger: GGGCTGGACTTCAGAGCCTCACAGGTGCACCGAGGC...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATGCCTCGGTGCACCTGTaGGGCTCTGAAGTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHASVHL*GSEVQP
Trigger: GGGCTGGACTTCAGAGCCTCACAGGTGCACCGAGGC...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGCTTGGCTAATCTCGTAGTTCAGGGCCAAGTTTCTGTAGTCAGAATGAAGAATTCCTGCTTTGAGCTGTaGGGCAAAGGTGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: GLANLVVQGQVSVVRMKNSCFEL*GKGEEA
Trigger: CGCCTCCTCACCTTTGCCTCACAGCTCAAAGCAGGA...ATTCTTCATTCTGACTACAGAAACTTGGCCCTGAACTACGAGATTAGCCAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTCCTGCTTTGAGCTGTaGGGCAAAGGTGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVSCFEL*GKGEEA
Trigger: CGCCTCCTCACCTTTGCCTCACAGCTCAAAGCAGGA...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGGCCACATGACTGGATaGGGTGGGAAATGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVGHMTG*GGKCPL
Trigger: GAGAGGGCATTTCCCACCTCATCCAGTCATGTGGCC...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACCGGGCATCTTCGCTTTaGCGCCAGCCATTAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYRASSL*RQPLGQ
Trigger: CTGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCG...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCAGCCTCAATGCGTAAGTaGTATAGGAAGGTGGCTAGG +
Preference number: 4 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSASMRK*YRKVAR
Trigger: CCTAGCCACCTTCCTATATCACTTACGCATTGAGGC...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCACTGGAATCCTTCCATTaGCTTCGCTTTTTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSLESFH*LRFLSP
Trigger: CGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAG...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTACACAGGCTTCTAGTTaGGTGGGAGTGGTAGTAATG +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGTQASS*VGVVVM
Trigger: CATTACTACCACTCCCACTCAACTAGAAGCCTGTGT...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAATTGAACCATGACTTCTaGGATTCATCTTTAATGCTG +
Preference number: 4 (lower is better)
Translates to: GGTRIGGILGPQESEATELNHDF*DSSLML
Trigger: CAGCATTAAAGATGAATCTCAGAAGTCATGGTTCAA...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAATACTTGGCATTAAGTTaGATGCCTCAAGTCTTAACT +
Preference number: 4 (lower is better)
Translates to: GGTRIGGILGPQESEATEYLALS*MPQVLT
Trigger: AGTTAAGACTTGAGGCATTCAACTTAATGCCAAGTA...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGGGATCCTGCAGGACATaGCTCACTACTGTTAAACTC +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARGSCRT*LTTVKL
Trigger: GAGTTTAACAGTAGTGAGTCATGTCCTGCAGGATCC...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp TCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGTCCCCTGGGCCACAGGAATCTaGGGCAACGGAAGATATATA +
Preference number: 4 (lower is better)
Translates to: SLGHRNLRQRKIYRVIVPWATGI*GNGRYI
Trigger: TATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCA...GGGGACGATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCTACTGAGAGAAGGGTaGGCAGAGGAGGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEALLREG*AEEDAG
Trigger: CCCTGCATCCTCCTCTGCTCACCCTTCTCTCAGTAG...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTCTACTGAGAGAAGGGTaGGCAGAGGAGGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVLLREG*AEEDAG
Trigger: CCCTGCATCCTCCTCTGCTCACCCTTCTCTCAGTAG...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCTTGTCGGTGTCACCATaGACCGAACTGAAGCCATCT +
Preference number: 4 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLILSVSP*TELKPS
Trigger: AGATGGCTTCAGTTCGGTTCATGGTGACACCGACAA...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CCTTCTCCTGATAGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCATTGTCGGTGTCACCATaGACCGAACTGAAGCCATCT +
Preference number: 4 (lower is better)
Translates to: PSPDRFLSLRPHQSQCWSLSVSP*TELKPS
Trigger: AGATGGCTTCAGTTCGGTTCATGGTGACACCGACAA...TGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCTATCAGGAGAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCGTCCGGACTGGTGTCTaGCAAACCTGGAATGTCATC +
Preference number: 4 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFVRTGV*QTWNVI
Trigger: GATGACATTCCAGGTTTGTCAGACACCAGTCCGGAC...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558667.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGATGACATCCTGGGGGTaGGAAGTCCGGTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVMTSWG*EVRSLG
Trigger: ACCCAGTGACCGGACTTCTCACCCCCAGGATGTCAT...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTATGACATCCTGGGGGTaGGAAGTCCGGTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASMTSWG*EVRSLG
Trigger: ACCCAGTGACCGGACTTCTCACCCCCAGGATGTCAT...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGATGACATCCTGGGGGTaGGAAGTCCGGTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVMTSWG*EVRSLG
Trigger: ACCCAGTGACCGGACTTCTCACCCCCAGGATGTCAT...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGACTCAGGTCCTCGATaGCATCCTGGGGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYDSGPR*HPGGEK
Trigger: CTTCTCACCCCCAGGATGTCATCGAGGACCTGAGTC...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGGACTCAGGTCCTCGATaGCATCCTGGGGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVDSGPR*HPGGEK
Trigger: CTTCTCACCCCCAGGATGTCATCGAGGACCTGAGTC...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGACTCAGGTCCTCGATaGCATCCTGGGGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVDSGPR*HPGGEK
Trigger: CTTCTCACCCCCAGGATGTCATCGAGGACCTGAGTC...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGGACTCAGGTCCTCGATaGCATCCTGGGGGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVDSGPR*HPGGEK
Trigger: CTTCTCACCCCCAGGATGTCATCGAGGACCTGAGTC...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCACTGTTGTGTATCAGGTaGATACCCCACAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: TADQMGALLHRYLRLSSSLLCIR*IPHRSG
Trigger: GCCAGACCTGTGGGGTATTCACCTGATACACAACAG...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGGGACCAAGAAAGCTGTaGCGTAGACACGCATGTTAT +
Preference number: 4 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKGPRKL*RRHACY
Trigger: ATAACATGCGTGTCTACGGCACAGCTTTCTTGGTCC...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCGTTCCCCATTGGCTTTaGTGTGGCCAAAAACCCTCA +
Preference number: 4 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIVPHWL*CGQKPS
Trigger: TGAGGGTTTTTGGCCACAGCAAAGCCAATGGGGAAC...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp AGTGTGGCTCTAGAACTTCCAATTCCATTGCTAGATGTGCCCTTTAAAAGATGGCAAAGCAAACCGGGCTaGACTGAGGGACAGCCCACG +
Preference number: 4 (lower is better)
Translates to: SVALELPIPLLDVPFKRWQSKPG*TEGQPT
Trigger: CGTGGGCTGTCCCTCAGTGCAGCCCGGTTTGCTTTG...CCATCTTTTAAAGGGCACATCTAGCAATGGAATTGGAAGTTCTAGAGCCACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR GCA 90 bp CGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGTCTGCCTCCATTAGGTaGTTTATGGTCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RMLSRSWNPSIDFAFCPRSASIR*FMVCSA
Trigger: TGCTGAGCAGACCATAAAGCACCTAATGGAGGCAGA...CCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACACCGTGTTGTGCTTCATaGCCCCAAGGCCACATGACT +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTPCCAS*PQGHMT
Trigger: AGTCATGTGGCCTTGGGGGCATGAAGCACAACACGG...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCACCGTGTTGTGCTTCATaGCCCCAAGGCCACATGACT +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSPCCAS*PQGHMT
Trigger: AGTCATGTGGCCTTGGGGGCATGAAGCACAACACGG...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGCTACCTCCGCCTCAATaGGTAAGTGATATAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARLPPPQ*VSDIGR
Trigger: CCTTCCTATATCACTTACGCATTGAGGCGGAGGTAG...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCATCGTTCCATCATCAAAGTaGGCTCGTAAGTATATGCTG +
Preference number: 4 (lower is better)
Translates to: RSVLDSRMCRSIWDLCSIVPSSK*ARKYML
Trigger: CAGCATATACTTACGAGCGCACTTTGATGATGGAAC...GATGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACATTGGATAGCCGCATGTaGCGGAGCATCTGGGACCTT +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTLDSRM*RSIWDL
Trigger: AAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAA...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCCTCATCAGAGCCAATaGTGGTCAATCGTAGCATTG +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGPHQSQ*WSIVAL
Trigger: CAATGCTACGATTGACCAGCATTGGCTCTGATGAGG...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGCCTCATCAGAGCCAATaGTGGTCAATCGTAGCATTG +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARPHQSQ*WSIVAL
Trigger: CAATGCTACGATTGACCAGCATTGGCTCTGATGAGG...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTAGTTTCACTGCTGTATaGATCCGCCTCACATTGGAC +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGSFTAV*IRLTLD
Trigger: GTCCAATGTGAGGCGGATGCATACAGCAGTGAAACT...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGAGTTTCACTGCTGTATaGATCCGCCTCACATTGGAC +
Preference number: 4 (lower is better)
Translates to: RMLSRSWNPSIDFAFCPRSFTAV*IRLTLD
Trigger: GTCCAATGTGAGGCGGATGCATACAGCAGTGAAACT...CCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp AAAAGACTTAAGATCCTATCCGCTTTGCCATCCTCAGTGGGCCTGGAGGTTGAAGCTGGAGTGCAGTGGTaGAATCTCGGTTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: KRLKILSALPSSVGLEVEAGVQW*NLGSLQ
Trigger: TTGCAGTGAACCGAGATTGCACCACTGCACTCCAGC...TTCAACCTCCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTTAAGTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGAGATCCTATCCGCTTTaGCATCCTCAGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: PLTAQTWLERLEHCSDVERSYPL*HPQWAW
Trigger: CCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCT...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR GCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTATCCAGTGCAACAGTTaGCAGCGAAGTGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASIQCNS*QRSGGP
Trigger: GGGGCCACCACTTCGCTGGCAACTGTTGCACTGGAT...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTATCCAGTGCAACAGTTaGCAGCGAAGTGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVIQCNS*QRSGGP
Trigger: GGGGCCACCACTTCGCTGGCAACTGTTGCACTGGAT...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATATCCAGTGCAACAGTTaGCAGCGAAGTGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDIQCNS*QRSGGP
Trigger: GGGGCCACCACTTCGCTGGCAACTGTTGCACTGGAT...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCAACTGGGTGGATCCAGTaGAACAGTTGCCAGCGAAGT +
Preference number: 4 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQATGWIQ*NSCQRS
Trigger: ACTTCGCTGGCAACTGTTGCACTGGATCCACCCAGT...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCACTGGGTGGATCCAGTaGAACAGTTGCCAGCGAAGT +
Preference number: 4 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFTGWIQ*NSCQRS
Trigger: ACTTCGCTGGCAACTGTTGCACTGGATCCACCCAGT...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCAGTTGGGCGAAGTGCGTaGAGGCAAACCTTTATCAGG +
Preference number: 4 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQAVGRSA*RQTFIR
Trigger: CCTGATAAAGGTTTGCCTGCACGCACTTCGCCCAAC...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCGTTGGGCGAAGTGCGTaGAGGCAAACCTTTATCAGG +
Preference number: 4 (lower is better)
Translates to: SSSEPMLVNRSIEFRSFTVGRSA*RQTFIR
Trigger: CCTGATAAAGGTTTGCCTGCACGCACTTCGCCCAAC...GGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTGATGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGTCTAGTTGGGCGAAGTaGGTGCAGGCAAACCTTTAT +
Preference number: 4 (lower is better)
Translates to: RMLSRSWNPSIDFAFCPRSSWAK*VQANLY
Trigger: ATAAAGGTTTGCCTGCACGCACTTCGCCCAACTAGA...CCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTGTTAGCATGTTTAGGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTAGTTGGGCGAAGTaGGTGCAGGCAAACCTTTAT +
Preference number: 4 (lower is better)
Translates to: LLACLGGTRIGGILGPQESSWAK*VQANLY
Trigger: ATAAAGGTTTGCCTGCACGCACTTCGCCCAACTAGA...TTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCCTAAACATGCTAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676379.1
CDS-3UTR CCA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGCCGTCGTCTAACAGTTaGCTGTGTTCCCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSEPSSNS*LCSPVM
Trigger: CATCACAGGGGAACACAGCCAACTGTTAGACGACGG...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCCATTGGCTTTGCTGTaGCCAAAAACCCTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGPLALL*PKTLRN
Trigger: GTTTCTGAGGGTTTTTGGCCACAGCAAAGCCAATGG...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGTTACCATGGCTACAATaGCATAATACCAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: GERGLVGSLGHRNLRQRKLPWLQ*HNTRKK
Trigger: TTTCTTCCTGGTATTATGCCATTGTAGCCATGGTAA...CTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCCAGTTTTTAGTGTGTaGAGGTCCTTCCTCCAATCG +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGPVFSV*RSFLQS
Trigger: CGATTGGAGGAAGGACCTCCACACACTAAAAACTGG...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATTGCCCTCTCTCAGCTTaGCGGCCACCACCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHCPLSA*RPPPAG
Trigger: GCCAGCTGGTGGTGGCCGCCAAGCTGAGAGAGGGCA...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGACCAGCAGTGCAAGATaGGCAGCAGTTGTCACTCGA +
Preference number: 4 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSETSSAR*AAVVTR
Trigger: TCGAGTGACAACTGCTGCCCATCTTGCACTGCTGGT...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CCA 90 bp CGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCATCCTGTTGTCTTCTAATTaGGCTACTGTGAAGATCCGT +
Preference number: 4 (lower is better)
Translates to: RSVLDSRMCRSIWDLCSILLSSN*ATVKIR
Trigger: ACGGATCTTCACAGTAGCCCAATTAGAAGACAACAG...GATGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCATGTCTCGCTCTGTTTTaGATAGCCGCATGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQACLALF*IAACAG
Trigger: TCCGGCACATGCGGCTATCCAAAACAGAGCGAGACA...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTGCATCCGCCTCACATTaGACTGGTCCGGACGCATGT +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASASASH*TGPDAC
Trigger: ACATGCGTCCGGACCAGTCCAATGTGAGGCGGATGC...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGCATCCGCCTCACATTaGACTGGTCCGGACGCATGT +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVASASH*TGPDAC
Trigger: ACATGCGTCCGGACCAGTCCAATGTGAGGCGGATGC...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGGCATCCGCCTCACATTaGACTGGTCCGGACGCATGT +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVASASH*TGPDAC
Trigger: ACATGCGTCCGGACCAGTCCAATGTGAGGCGGATGC...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCGTGGTAGTAATGAGCTaGCACTTCCATGGAGGACGT +
Preference number: 4 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIVVVMS*HFHGGR
Trigger: ACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AAAAGACTTAAGATCCTATCCGCTTTGCCATCCTCAGTGGGCCTGGAGGTTGAACATCCTCAGTGGGCCTaGAGGTTGAAGCAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: KRLKILSALPSSVGLEVEHPQWA*RLKQAK
Trigger: CTTTGCTTGCTTCAACCTCCAGGCCCACTGAGGATG...TTCAACCTCCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTTAAGTCTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATCCTGCCGAAGGAACCTaGCACCTGTCAAGCAGATGC +
Preference number: 4 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDPAEGT*HLSSRC
Trigger: GCATCTGCTTGACAGGTGCCAGGTTCCTTCGGCAGG...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACAGGGAACGAGGATTGGTaGGATCCTTGGGCCACAGGA +
Preference number: 4 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTGNEDW*DPWATG
Trigger: TCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCC...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGAGGGGGAACGAGGATTaGTGGGATCCTTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVRGNED*WDPWAT
Trigger: TGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCCT...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp GGTCAATGCCAATCTGTATGCCATTTTAGTAAAGTAGGTAAGGAGAGTAGCCGCAGGGGGAACGAGGATTaGTGGGATCCTTGGGCCACA +
Preference number: 4 (lower is better)
Translates to: GQCQSVCHFSKVGKESSRRGNED*WDPWAT
Trigger: TGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCCT...GCGGCTACTCTCCTTACCTACTTTACTAAAATGGCATACAGATTGGCATTGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCTGCAGCTCAGAGTCGTaGCAAGTCGTAGCTAGTCCA +
Preference number: 4 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFCSSES*QVVASP
Trigger: TGGACTAGCTACGACTTGCCACGACTCTGAGCTGCA...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAAGGTCCTCGGGGTCTaGGAGGAGGTTAGCGGATCA +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASKVLGV*EEVSGS
Trigger: TGATCCGCTAACCTCCTCCCAGACCCCGAGGACCTT...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CTCCAACCACAAACAGCACTTCTAAAACTAACTTTACTTTCTGCCCATAATTTGAGAGGTCGGTGGGGGTaGCGCGCCCGCTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LQPQTALLKLTLLSAHNLRGRWG*RARSSP
Trigger: AGGAGAAGAGCGGGCGCGCCACCCCCACCGACCTCT...CAAATTATGGGCAGAAAGTAAAGTTAGTTTTAGAAGTGCTGTTTGTGGTTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTGAACTGAAGCCATCTTaGTGGTGGTTTCTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGELKPS*WWFLED
Trigger: ATCCTCCAGAAACCACCACCAAGATGGCTTCAGTTC...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558667.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGTCCCCGAACTGAAGCCATCTTaGTGGTGGTTTCTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: SLGHRNLRQRKIYRVIVPELKPS*WWFLED
Trigger: ATCCTCCAGAAACCACCACCAAGATGGCTTCAGTTC...GGGGACGATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTTTGCCAGCGAAGTGGTaGCCCCAGACATCTCACTCA +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGLPAKW*PQTSHS
Trigger: TGAGTGAGATGTCTGGGGCCACCACTTCGCTGGCAA...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAATTGCCAGCGAAGTGGTaGCCCCAGACATCTCACTCA +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQLPAKW*PQTSHS
Trigger: TGAGTGAGATGTCTGGGGCCACCACTTCGCTGGCAA...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTTTGTCCAAGTCATGTGCACCTTCTCCTGATAGGTTTCTGTCTCTTCGTCCTCTTGCCAGCGAAGTGGTaGCCCCAGACATCTCACTCA +
Preference number: 4 (lower is better)
Translates to: FCPSHVHLLLIGFCLFVLLPAKW*PQTSHS
Trigger: TGAGTGAGATGTCTGGGGCCACCACTTCGCTGGCAA...GAGGACGAAGAGACAGAAACCTATCAGGAGAAGGTGCACATGACTTGGACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTCTGTCTCTTGCCAGCGAAGTGGTaGCCCCAGACATCTCACTCA +
Preference number: 4 (lower is better)
Translates to: WSIVALSFGLSPIVPLCLLPAKW*PQTSHS
Trigger: TGAGTGAGATGTCTGGGGCCACCACTTCGCTGGCAA...GAGACAGAGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATCAGTTGCCAGCGAAGTaGTGGCCCCAGACATCTCAC +
Preference number: 4 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYQLPAK*WPQTSH
Trigger: GTGAGATGTCTGGGGCCACCACTTCGCTGGCAACTG...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGATGCCATGTACTTGTCTTTTCAGTTGCCAGCGAAGTaGTGGCCCCAGACATCTCAC +
Preference number: 4 (lower is better)
Translates to: NPSIDFAFCPRDAMYLSFQLPAK*WPQTSH
Trigger: GTGAGATGTCTGGGGCCACCACTTCGCTGGCAACTG...AAAAGACAAGTACATGGCATCCCGGGGACAAAAAGCGAAGTCAATGGAAGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTTTGTCCAAGTCATGTGCACCTTCTCCTGATAGGTTTCTGTCTCTTCGTCCTCAGTCCGGTCACTGGGTaGATCCAGTGCAACAGTTGC +
Preference number: 4 (lower is better)
Translates to: FCPSHVHLLLIGFCLFVLSPVTG*IQCNSC
Trigger: GCAACTGTTGCACTGGATCCACCCAGTGACCGGACT...GAGGACGAAGAGACAGAAACCTATCAGGAGAAGGTGCACATGACTTGGACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTTGTCGACAATCCACTTaGGTCTGGTGGGAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: SGRMLSRSWNPSIDFAFCCRQST*VWWERC
Trigger: GCACCTTTCCCACCAGACCCAAGTGGATTGTCGACA...ACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATTCCCACGGTTCTAGTTaGGCGAAGTGCGTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDSHGSS*AKCVQA
Trigger: TGCCTGCACGCACTTCGCCCAACTAGAACCGTGGGA...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGTCCCACGGTTCTAGTTaGGCGAAGTGCGTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVSHGSS*AKCVQA
Trigger: TGCCTGCACGCACTTCGCCCAACTAGAACCGTGGGA...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676379.1
CDS-3UTR TCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGGAAATCATAAAGTATaGGCCCCCAGCTGGCACCAC +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSGNHKV*APSWHH
Trigger: GTGGTGCCAGCTGGGGGCTCATACTTTATGATTTCC...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CAGAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGGGAAATCATAAAGTATaGGCCCCCAGCTGGCACCAC +
Preference number: 4 (lower is better)
Translates to: QSQCWSIVALSFGLSPIVGNHKV*APSWHH
Trigger: GTGGTGCCAGCTGGGGGCTCATACTTTATGATTTCC...CACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGGAAATCATAAAGTATaGGCCCCCAGCTGGCACCAC +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQGNHKV*APSWHH
Trigger: GTGGTGCCAGCTGGGGGCTCATACTTTATGATTTCC...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGAGTGCGTCATCACTGTaGAAGATGGCAGCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: FSVMTADQMGALLHRYLRSASSL*KMAARG
Trigger: CCCCCGAGCTGCCATCTTTCACAGTGATGACGCACT...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGTGCGTCATCACTGTaGAAGATGGCAGCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: AFSVMTADQMGALLHRYLSASSL*KMAARG
Trigger: CCCCCGAGCTGCCATCTTTCACAGTGATGACGCACT...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGTGGCTGCTGATTCCTTaGGTGCGTCATCACTGTGAA +
Preference number: 4 (lower is better)
Translates to: RFLSLRPHQSQCWSIVALWLLIP*VRHHCE
Trigger: TTCACAGTGATGACGCACTCAAGGAATCAGCAGCCA...CAATGCTACGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGTGGCTGCTGATTCCTTaGGTGCGTCATCACTGTGAA +
Preference number: 4 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSEWLLIP*VRHHCE
Trigger: TTCACAGTGATGACGCACTCAAGGAATCAGCAGCCA...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGCTGAAGGCTTTTCGATaGTCTCTCCCTTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSELKAFR*SLPWVG
Trigger: ACCTACCCAAGGGAGAGATCATCGAAAAGCCTTCAG...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCTGAAGGCTTTTCGATaGTCTCTCCCTTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: SGRMLSRSWNPSIDFAFCLKAFR*SLPWVG
Trigger: ACCTACCCAAGGGAGAGATCATCGAAAAGCCTTCAG...ACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGTCCCCATCTCCAGATCTGTTTaGTCCAGCCATGATACCTGT +
Preference number: 4 (lower is better)
Translates to: SLGHRNLRQRKIYRVIVPISRSV*SSHDTC
Trigger: ACAGGTATCATGGCTGGATCAAACAGATCTGGAGAT...GGGGACGATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCAGATCCAGGGAGGCAATaGGTATTCCAAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQADPGRQ*VFQALQ
Trigger: TTGCAGAGCTTGGAATACTCATTGCCTCCCTGGATC...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATCAAACCGGGCTGCACTaGGGGACAGCCCACGGATAC +
Preference number: 4 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHQTGLH*GTAHGY
Trigger: GTATCCGTGGGCTGTCCCTCAGTGCAGCCCGGTTTG...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAAACCGGGCTGCACTaGGGGACAGCCCACGGATAC +
Preference number: 4 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTQTGLH*GTAHGY
Trigger: GTATCCGTGGGCTGTCCCTCAGTGCAGCCCGGTTTG...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACTCCTGCTTTGAGCTGTaGGGCAAAGGTGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYSCFEL*GKGEEA
Trigger: CGCCTCCTCACCTTTGCCTCACAGCTCAAAGCAGGA...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGTCCTGCTTTGAGCTGTaGGGCAAAGGTGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: FSVMTADQMGALLHRYLRSCFEL*GKGEEA
Trigger: CGCCTCCTCACCTTTGCCTCACAGCTCAAAGCAGGA...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGGGCCACATGACTGGATaGGGTGGGAAATGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVEGHMTG*GGKCPL
Trigger: GAGAGGGCATTTCCCACCTCATCCAGTCATGTGGCC...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCCTAATTGGGCTACTGTaGAGATCCGTATGCTGCACT +
Preference number: 4 (lower is better)
Translates to: VGSLGHRNLRQRKIYRVILIGLL*RSVCCT
Trigger: AGTGCAGCATACGGATCTTCACAGTAGCCCAATTAG...GATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp TCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCGCCTCAATGCGTAAGTaGTATAGGAAGGTGGCTAGG +
Preference number: 4 (lower is better)
Translates to: SSSEPMLVNRSIEFRSFTASMRK*YRKVAR
Trigger: CCTAGCCACCTTCCTATATCACTTACGCATTGAGGC...GGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTGATGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGCTGGAATCCTTCCATTaGCTTCGCTTTTTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSELESFH*LRFLSP
Trigger: CGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAG...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTTTTTACACAGGTACTTaGGGCTCAGCTCATCAAGAG +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGFYTGT*GSAHQE
Trigger: CTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAA...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCAAGATAGATAGCTATTaGAGGCAGAGGGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VGSLGHRNLRQRKIYRVIKIDSY*RQRVSR
Trigger: CCTGCTGACCCTCTGCCTTCAATAGCTATCTATCTT...GATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACCTACTGAGAGAAGGGTaGGCAGAGGAGGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYLLREG*AEEDAG
Trigger: CCCTGCATCCTCCTCTGCTCACCCTTCTCTCAGTAG...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAACACCATGAACCGAACTaGAGCCATCTTGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQHHEPN*SHLGGG
Trigger: ACCACCACCAAGATGGCTTCAGTTCGGTTCATGGTG...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558667.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACACCTGTGATGGAGTTCTaGCTCAGGTCCTCGATGACA +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTPVMEF*LRSSMT
Trigger: TGTCATCGAGGACCTGAGTCAGAACTCCATCACAGG...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGAGTCCTGTGATGGAGTTCTaGCTCAGGTCCTCGATGACA +
Preference number: 4 (lower is better)
Translates to: FLSLRPHQSQCWSIVALSPVMEF*LRSSMT
Trigger: TGTCATCGAGGACCTGAGTCAGAACTCCATCACAGG...ACTCAATGCTACGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTCTGTCTCTGTTGTGTATCAGGTaGATACCCCACAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: LVNRSIEFRSFTNCASLSLLCIR*IPHRSG
Trigger: GCCAGACCTGTGGGGTATTCACCTGATACACAACAG...AGACAGAGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCGTCTTGATGAAAGGGTaGGGTTACCCAGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFVLMKG*GYPACR
Trigger: TCTGCATGCTGGGTAACCGCACCCTTTCATCAAGAC...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTGTCTTGATGAAAGGGTaGGGTTACCCAGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: SGRMLSRSWNPSIDFAFCVLMKG*GYPACR
Trigger: TCTGCATGCTGGGTAACCGCACCCTTTCATCAAGAC...ACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGGTTCCCCATTGGCTTTaGTGTGGCCAAAAACCCTCA +
Preference number: 4 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSEVPHWL*CGQKPS
Trigger: TGAGGGTTTTTGGCCACAGCAAAGCCAATGGGGAAC...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAGTTCCCCATTGGCTTTaGTGTGGCCAAAAACCCTCA +
Preference number: 4 (lower is better)
Translates to: TADQMGALLHRYLRLSSSVPHWL*CGQKPS
Trigger: TGAGGGTTTTTGGCCACAGCAAAGCCAATGGGGAAC...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTAGGTGCTTTATGGTCTaGTCAGCAGCTAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGRCFMV*SAAKAS
Trigger: TGAAGCTTTAGCTGCTGAGCAGACCATAAAGCACCT...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGATGCCAGGTGCTTTATGGTCTaGTCAGCAGCTAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LSRSWNPSIDFAFCPRDARCFMV*SAAKAS
Trigger: TGAAGCTTTAGCTGCTGAGCAGACCATAAAGCACCT...GGCATCCCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATCTGCCTCCATTAGGTaGTTTATGGTCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSSASIR*FMVCSA
Trigger: TGCTGAGCAGACCATAAAGCACCTAATGGAGGCAGA...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACCGTGTTGTGCTTCATaGCCCCAAGGCCACATGACT +
Preference number: 4 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTPCCAS*PQGHMT
Trigger: AGTCATGTGGCCTTGGGGGCATGAAGCACAACACGG...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGCCGTGTTGTGCTTCATaGCCCCAAGGCCACATGACT +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVPCCAS*PQGHMT
Trigger: AGTCATGTGGCCTTGGGGGCATGAAGCACAACACGG...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGATCACCACCGTGTTGTaGTTCATGCCCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVITTVL*FMPPRP
Trigger: TGGCCTTGGGGGCATGAAGCACAACACGGTGGTGAT...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACAATCACCACCGTGTTGTaGTTCATGCCCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTITTVL*FMPPRP
Trigger: TGGCCTTGGGGGCATGAAGCACAACACGGTGGTGAT...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTATCACCACCGTGTTGTaGTTCATGCCCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEAITTVL*FMPPRP
Trigger: TGGCCTTGGGGGCATGAAGCACAACACGGTGGTGAT...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCATTTAGCCACCAGCAGTaGAAGATGGGCAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: TADQMGALLHRYLRLSSSFSHQQ*KMGSSC
Trigger: ACAACTGCTGCCCATCTTGCACTGCTGGTGGCTAAA...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR GCA 90 bp TCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCTTTAGCCACCAGCAGTaGAAGATGGGCAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: SSSEPMLVNRSIEFRSFTFSHQQ*KMGSSC
Trigger: ACAACTGCTGCCCATCTTGCACTGCTGGTGGCTAAA...GGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTGATGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559523.5
CDS-3UTR GCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACATTGGATAGCCGCATGTaGCGGAGCATCTGGGACCTT +
Preference number: 4 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTLDSRM*RSIWDL
Trigger: AAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAA...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATTTGGATAGCCGCATGTaGCGGAGCATCTGGGACCTT +
Preference number: 4 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYLDSRM*RSIWDL
Trigger: AAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAA...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTTTGGATAGCCGCATGTaGCGGAGCATCTGGGACCTT +
Preference number: 4 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEALDSRM*RSIWDL
Trigger: AAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAA...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATTTGGATAGCCGCATGTaGCGGAGCATCTGGGACCTT +
Preference number: 4 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDLDSRM*RSIWDL
Trigger: AAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAA...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCAGTCTTTCACCAATTGTaGCTCTCTGTCTCGCTCTGT +
Preference number: 4 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSVFHQL*LSVSLC
Trigger: ACAGAGCGAGACAGAGAGGCACAATTGGTGAAAGAC...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCCCTCATCAGAGCCAATaGTGGTCAATCGTAGCATTG +
Preference number: 4 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIPHQSQ*WSIVAL
Trigger: CAATGCTACGATTGACCAGCATTGGCTCTGATGAGG...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCACCTCATCAGAGCCAATaGTGGTCAATCGTAGCATTG +
Preference number: 4 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSPHQSQ*WSIVAL
Trigger: CAATGCTACGATTGACCAGCATTGGCTCTGATGAGG...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CTCCTGATAGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGCCTCATCAGAGCCAATaGTGGTCAATCGTAGCATTG +
Preference number: 4 (lower is better)
Translates to: LLIGFCLFVLIRANAGQSPHQSQ*WSIVAL
Trigger: CAATGCTACGATTGACCAGCATTGGCTCTGATGAGG...CGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCTATCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp AGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGCTCGTTGAGTTTCACTaGTGTATGCATCCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: RFLSLRPHQSQCWSIVALLVEFH*CMHPPH
Trigger: GTGAGGCGGATGCATACAGCAGTGAAACTCAACGAG...CAATGCTACGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCACTCGTTGAGTTTCACTaGTGTATGCATCCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: TADQMGALLHRYLRLSSSLVEFH*CMHPPH
Trigger: GTGAGGCGGATGCATACAGCAGTGAAACTCAACGAG...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGAGAAAAAGGGGGAAATaGTTATACTTGGCATTAAGT +
Preference number: 4 (lower is better)
Translates to: GERGLVGSLGHRNLRQRKRKRGK*LYLALS
Trigger: ACTTAATGCCAAGTATAAGCATTTCCCCCTTTTTCT...CTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR GCA 90 bp ACCAGTTTTCCATGTAACAGTGATTTTGTGTTTCGGGCTGAAGCAGTGGTTATAGCAATCCTGGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: TSFPCNSDFVFRAEAVVIAILAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCCAGGATTGC...TATAACCACTGCTTCAGCCCGAAACACAAAATCACTGTTACATGGAAAACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGGCTGGAGTGCAGAGGTaGAATCCTGGCTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVAGVQR*NPGSLQ
Trigger: TTGCAGTGAGCCAGGATTGCACCTCTGCACTCCAGC...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR GCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAGAAGGAGGTCGCAGGTaGAGTATCCCGGCGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTEGGRR*SIPAPA
Trigger: AGCTGGCGCCGGGATACTGCACCTGCGACCTCCTTC...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTCAAGACACCTCGGACTaGAGCTCAGAGTCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVQDTSD*SSESWQ
Trigger: TTGCCACGACTCTGAGCTGCAGTCCGAGGTGTCTTG...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTACTGGGTGGATCCAGTaGAACAGTTGCCAGCGAAGT +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGTGWIQ*NSCQRS
Trigger: ACTTCGCTGGCAACTGTTGCACTGGATCCACCCAGT...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTGTGTCTGACAAACCTTaGGAAGAGAAGCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASVSDKP*EEKPGG
Trigger: ACCCCCGGGCTTCTCTTCGCAAGGTTTGTCAGACAC...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397702.6
CDS-3UTR CCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTAAGACACCTTCGGTCTaGTGTCCATTTCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGKTPSV*CPFLPQ
Trigger: TTGAGGAAGAAATGGACACCAGACCGAAGGTGTCTT...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAATGAAGGTACCCATTTaGGGGGTCTTGGTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTMKVPI*GVLVGF
Trigger: GAAGCCCACCAAGACCCCCCAAATGGGTACCTTCAT...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAATGAAGGTACCCATTTaGGGGGTCTTGGTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSMKVPI*GVLVGF
Trigger: GAAGCCCACCAAGACCCCCCAAATGGGTACCTTCAT...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AAAAGACTTAAGATCCTATCCGCTTTGCCATCCTCAGTGGGCCTGGAGGTTGAACATCACTGTGAAAGATaGCAGCTCGGGGGACGATAT +
Preference number: 4 (lower is better)
Translates to: KRLKILSALPSSVGLEVEHHCER*QLGGRY
Trigger: ATATCGTCCCCCGAGCTGCCATCTTTCACAGTGATG...TTCAACCTCCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTTAAGTCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCCATCACTGTGAAAGATaGCAGCTCGGGGGACGATAT +
Preference number: 4 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFHHCER*QLGGRY
Trigger: ATATCGTCCCCCGAGCTGCCATCTTTCACAGTGATG...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCACCATTGGCTTTGCTGTaGCCAAAAACCCTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSPLALL*PKTLRN
Trigger: GTTTCTGAGGGTTTTTGGCCACAGCAAAGCCAATGG...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTGTTAGCATGTTTAGGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAAATCGGGGTCTCCAGTTaGGTGTTCGAAGTAATGTTT +
Preference number: 4 (lower is better)
Translates to: LLACLGGTRIGGILGPQEIGVSS*VFEVMF
Trigger: AAACATTACTTCGAACACCCAACTGGAGACCCCGAT...TTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCCTAAACATGCTAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGATCGGGGTCTCCAGTTaGGTGTTCGAAGTAATGTTT +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARIGVSS*VFEVMF
Trigger: AAACATTACTTCGAACACCCAACTGGAGACCCCGAT...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGATCGGGGTCTCCAGTTaGGTGTTCGAAGTAATGTTT +
Preference number: 4 (lower is better)
Translates to: RMLSRSWNPSIDFAFCPRIGVSS*VFEVMF
Trigger: AAACATTACTTCGAACACCCAACTGGAGACCCCGAT...CCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTATCGGGGTCTCCAGTTaGGTGTTCGAAGTAATGTTT +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGIGVSS*VFEVMF
Trigger: AAACATTACTTCGAACACCCAACTGGAGACCCCGAT...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGTCCCCATCGGGGTCTCCAGTTaGGTGTTCGAAGTAATGTTT +
Preference number: 4 (lower is better)
Translates to: SLGHRNLRQRKIYRVIVPIGVSS*VFEVMF
Trigger: AAACATTACTTCGAACACCCAACTGGAGACCCCGAT...GGGGACGATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp AGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCATCATCAAAGTGCGCTCGTTACCATGGCTACAATaGCATAATACCAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SRMCRSIWDLCSIIKVRSLPWLQ*HNTRKK
Trigger: TTTCTTCCTGGTATTATGCCATTGTAGCCATGGTAA...CGAGCGCACTTTGATGATGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCATGTGCCGGAGCATCTaGGACCTTTGTTCCATCATC +
Preference number: 4 (lower is better)
Translates to: EPMLVNRSIEFRSFTNCAMCRSI*DLCSII
Trigger: GATGATGGAACAAAGGTCCCAGATGCTCCGGCACAT...GGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACATGTCTCGCTCTGTTTTaGATAGCCGCATGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTCLALF*IAACAG
Trigger: TCCGGCACATGCGGCTATCCAAAACAGAGCGAGACA...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCATGTCTCGCTCTGTTTTaGATAGCCGCATGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSCLALF*IAACAG
Trigger: TCCGGCACATGCGGCTATCCAAAACAGAGCGAGACA...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATCAGAGCCAATGCTaGTCAATCGTAGCATTGAGT +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGHQSQC*SIVALS
Trigger: ACTCAATGCTACGATTGACCAGCATTGGCTCTGATG...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGCATCAGAGCCAATGCTaGTCAATCGTAGCATTGAGT +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARHQSQC*SIVALS
Trigger: ACTCAATGCTACGATTGACCAGCATTGGCTCTGATG...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGTCCCCCATCAGAGCCAATGCTaGTCAATCGTAGCATTGAGT +
Preference number: 4 (lower is better)
Translates to: SLGHRNLRQRKIYRVIVPHQSQC*SIVALS
Trigger: ACTCAATGCTACGATTGACCAGCATTGGCTCTGATG...GGGGACGATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp CTCGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCAACCAGCTTTGCTTCATaGGACTTGTTAACTATAACC +
Preference number: 4 (lower is better)
Translates to: LALFWIAACAGASGTFVPTSFAS*DLLTIT
Trigger: GGTTATAGTTAACAAGTCCCATGAAGCAAAGCTGGT...TGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCGTGGTAGTAATGAGCTaGCACTTCCATGGAGGACGT +
Preference number: 4 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFVVVMS*HFHGGR
Trigger: ACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CTCGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCAAAAATGTTTGCATCTTaGCTTGCCGAGGATAATAGG +
Preference number: 4 (lower is better)
Translates to: LALFWIAACAGASGTFVPKMFAS*LAEDNR
Trigger: CCTATTATCCTCGGCAAGCCAAGATGCAAACATTTT...TGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGAGCCTTCCGTGTTGCTaGGATCACAGGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVSLPCC*DHRHAP
Trigger: TGGTGCATGCCTGTGATCCCAGCAACACGGAAGGCT...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTAGCCTTCCGTGTTGCTaGGATCACAGGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSSLPCC*DHRHAP
Trigger: TGGTGCATGCCTGTGATCCCAGCAACACGGAAGGCT...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGCTTTGCCATCCTCAGTaGGCCTGGAGGTTGAAGCAA +
Preference number: 4 (lower is better)
Translates to: PLTAQTWLERLEHCSDVELCHPQ*AWRLKQ
Trigger: TTGCTTCAACCTCCAGGCCCACTGAGGATGGCAAAG...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp AGTGTGGCTCTAGAACTTCCAATTCCATTGCTAGATGTGCCCTTTAAAAGATGGCCTGCCGAAGGAACCTaGCACCTGTCAAGCAGATGC +
Preference number: 4 (lower is better)
Translates to: SVALELPIPLLDVPFKRWPAEGT*HLSSRC
Trigger: GCATCTGCTTGACAGGTGCCAGGTTCCTTCGGCAGG...CCATCTTTTAAAGGGCACATCTAGCAATGGAATTGGAAGTTCTAGAGCCACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGTGCAGCTCAGAGTCGTaGCAAGTCGTAGCTAGTCCA +
Preference number: 4 (lower is better)
Translates to: PLTAQTWLERLEHCSDVECSSES*QVVASP
Trigger: TGGACTAGCTACGACTTGCCACGACTCTGAGCTGCA...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGTCAATGCCAATCTGTATGCCATTTTAGTAAAGTAGGTAAGGAGAGTAGCCGCTTGCCAGCGAAGTGGTaGCCCCAGACATCTCACTCA +
Preference number: 4 (lower is better)
Translates to: GQCQSVCHFSKVGKESSRLPAKW*PQTSHS
Trigger: TGAGTGAGATGTCTGGGGCCACCACTTCGCTGGCAA...GCGGCTACTCTCCTTACCTACTTTACTAAAATGGCATACAGATTGGCATTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354181.8
CDS-3UTR CCA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTTTGCCAGCGAAGTGGTaGCCCCAGACATCTCACTCA +
Preference number: 4 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEALPAKW*PQTSHS
Trigger: TGAGTGAGATGTCTGGGGCCACCACTTCGCTGGCAA...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACCAGTTGCCAGCGAAGTaGTGGCCCCAGACATCTCAC +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYQLPAK*WPQTSH
Trigger: GTGAGATGTCTGGGGCCACCACTTCGCTGGCAACTG...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTAGTCCGGTCACTGGGTaGATCCAGTGCAACAGTTGC +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVSPVTG*IQCNSC
Trigger: GCAACTGTTGCACTGGATCCACCCAGTGACCGGACT...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTAGTCCGGTCACTGGGTaGATCCAGTGCAACAGTTGC +
Preference number: 4 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSSPVTG*IQCNSC
Trigger: GCAACTGTTGCACTGGATCCACCCAGTGACCGGACT...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTCCGGTCACTGGGTaGATCCAGTGCAACAGTTGC +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASSPVTG*IQCNSC
Trigger: GCAACTGTTGCACTGGATCCACCCAGTGACCGGACT...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGAGTCCGGTCACTGGGTaGATCCAGTGCAACAGTTGC +
Preference number: 4 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVSPVTG*IQCNSC
Trigger: GCAACTGTTGCACTGGATCCACCCAGTGACCGGACT...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGAAGTCCGGTCACTaGGTGGATCCAGTGCAACAG +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVEKSGH*VDPVQQ
Trigger: CTGTTGCACTGGATCCACCCAGTGACCGGACTTCTC...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGGAGAAGTCCGGTCACTaGGTGGATCCAGTGCAACAG +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVEKSGH*VDPVQQ
Trigger: CTGTTGCACTGGATCCACCCAGTGACCGGACTTCTC...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACAGAGAAGTCCGGTCACTaGGTGGATCCAGTGCAACAG +
Preference number: 4 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTEKSGH*VDPVQQ
Trigger: CTGTTGCACTGGATCCACCCAGTGACCGGACTTCTC...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGAAGTCCGGTCACTaGGTGGATCCAGTGCAACAG +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVEKSGH*VDPVQQ
Trigger: CTGTTGCACTGGATCCACCCAGTGACCGGACTTCTC...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
3UTR CAA 72 bp CGTCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATaGAGTTTCGGTCTTTCACCAATTGTGCCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: RPHQSQCWSIVA*SFGLSPIVPLC
Trigger: ACAGAGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTGATGAGGACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAACAATTGCAAAAGCCTaGAGAACTCCAGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSTIAKA*RTPAVP
Trigger: GGGCACAGCTGGAGTTCTTCAGGCTTTTGCAATTGT...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTACAATTGCAAAAGCCTaGAGAACTCCAGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGTIAKA*RTPAVP
Trigger: GGGCACAGCTGGAGTTCTTCAGGCTTTTGCAATTGT...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGAGTACAATTGCAAAAGCCTaGAGAACTCCAGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: FLSLRPHQSQCWSIVALSTIAKA*RTPAVP
Trigger: GGGCACAGCTGGAGTTCTTCAGGCTTTTGCAATTGT...ACTCAATGCTACGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGGAAATCATAAAGTATaGGCCCCCAGCTGGCACCAC +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVGNHKV*APSWHH
Trigger: GTGGTGCCAGCTGGGGGCTCATACTTTATGATTTCC...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGGAAATCATAAAGTATaGGCCCCCAGCTGGCACCAC +
Preference number: 4 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYGNHKV*APSWHH
Trigger: GTGGTGCCAGCTGGGGGCTCATACTTTATGATTTCC...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGGAAATCATAAAGTATaGGCCCCCAGCTGGCACCAC +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVGNHKV*APSWHH
Trigger: GTGGTGCCAGCTGGGGGCTCATACTTTATGATTTCC...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTTGGCTGCTGATTCCTTaGGTGCGTCATCACTGTGAA +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGWLLIP*VRHHCE
Trigger: TTCACAGTGATGACGCACTCAAGGAATCAGCAGCCA...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCACCAAGATGGACACAATaGCACAGGCCAGGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSPRWTQ*HRPGKV
Trigger: CACTTTTCCTGGCCTGTGTCATTGTGTCCATCTTGG...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGGAGCAAAAGAAGACTTaGTGGCTCCAGCATAGATGG +
Preference number: 4 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSEEQKKT*WLQHRW
Trigger: CCATCTATGCTGGAGCCATCAAGTCTTCTTTTGCTC...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGCATCACAGGTGGCATTaGAAAATTGACTCGAGTTAC +
Preference number: 4 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKHHRWH*KIDSSY
Trigger: GTAACTCGAGTCAATTTTTCAATGCCACCTGTGATG...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTGCCCTGGATTGAAGTaGCGTTATTGTGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARCPGLK*RYCEQS
Trigger: ACTTTGTTCACAATAACGTCACTTCAATCCAGGGCA...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACACTGAAGGCTTTTCGATaGTCTCTCCCTTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTLKAFR*SLPWVG
Trigger: ACCTACCCAAGGGAGAGATCATCGAAAAGCCTTCAG...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCATCTCCAGATCTGTTTaGTCCAGCCATGATACCTGT +
Preference number: 4 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIISRSV*SSHDTC
Trigger: ACAGGTATCATGGCTGGATCAAACAGATCTGGAGAT...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGAGTGATCCAGGGAGGCAATaGGTATTCCAAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: FLSLRPHQSQCWSIVALSDPGRQ*VFQALQ
Trigger: TTGCAGAGCTTGGAATACTCATTGCCTCCCTGGATC...ACTCAATGCTACGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCCTAATTGGGCTACTGTaGAGATCCGTATGCTGCACT +
Preference number: 4 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFLIGLL*RSVCCT
Trigger: AGTGCAGCATACGGATCTTCACAGTAGCCCAATTAG...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGCTAATTGGGCTACTGTaGAGATCCGTATGCTGCACT +
Preference number: 4 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSELIGLL*RSVCCT
Trigger: AGTGCAGCATACGGATCTTCACAGTAGCCCAATTAG...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACTAATTGGGCTACTGTaGAGATCCGTATGCTGCACT +
Preference number: 4 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQALIGLL*RSVCCT
Trigger: AGTGCAGCATACGGATCTTCACAGTAGCCCAATTAG...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGGCCTCAATGCGTAAGTaGTATAGGAAGGTGGCTAGG +
Preference number: 4 (lower is better)
Translates to: PLTAQTWLERLEHCSDVEASMRK*YRKVAR
Trigger: CCTAGCCACCTTCCTATATCACTTACGCATTGAGGC...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGCCTCAATGCGTAAGTaGTATAGGAAGGTGGCTAGG +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSASMRK*YRKVAR
Trigger: CCTAGCCACCTTCCTATATCACTTACGCATTGAGGC...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCTGGAATCCTTCCATTaGCTTCGCTTTTTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGLESFH*LRFLSP
Trigger: CGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAG...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGCTGGAATCCTTCCATTaGCTTCGCTTTTTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: PLTAQTWLERLEHCSDVELESFH*LRFLSP
Trigger: CGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAG...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTTTGTCCAAGTCATGTGCACCTTCTCCTGATAGGTTTCTGTCTCTTCGTCCTCCTGGAATCCTTCCATTaGCTTCGCTTTTTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: FCPSHVHLLLIGFCLFVLLESFH*LRFLSP
Trigger: CGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAG...GAGGACGAAGAGACAGAAACCTATCAGGAGAAGGTGCACATGACTTGGACAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAACTGGAATCCTTCCATTaGCTTCGCTTTTTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQLESFH*LRFLSP
Trigger: CGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAG...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CAGAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCTGGAATCCTTCCATTaGCTTCGCTTTTTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: QSQCWSIVALSFGLSPIVLESFH*LRFLSP
Trigger: CGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAG...CACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGGTTATGAATAAATGGTaGTCACTTCACTGCCACCAC +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARVMNKW*SLHCHH
Trigger: GTGGTGGCAGTGAAGTGATCACCATTTATTCATAAC...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGGTTATGAATAAATGGTaGTCACTTCACTGCCACCAC +
Preference number: 4 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKVMNKW*SLHCHH
Trigger: GTGGTGGCAGTGAAGTGATCACCATTTATTCATAAC...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTGTTATGAATAAATGGTaGTCACTTCACTGCCACCAC +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGVMNKW*SLHCHH
Trigger: GTGGTGGCAGTGAAGTGATCACCATTTATTCATAAC...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGGAAGATATATAGAGTaGTCGTCCCCCTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDGRYIE*SSPCRR
Trigger: CCTTCGGCAGGGGGACGATCACTCTATATATCTTCC...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTCACCATGAACCGAACTaGAGCCATCTTGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSHHEPN*SHLGGG
Trigger: ACCACCACCAAGATGGCTTCAGTTCGGTTCATGGTG...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558667.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAATTGTCGGTGTCACCATaGACCGAACTGAAGCCATCT +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQLSVSP*TELKPS
Trigger: AGATGGCTTCAGTTCGGTTCATGGTGACACCGACAA...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558667.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCATTGTCGGTGTCACCATaGACCGAACTGAAGCCATCT +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSLSVSP*TELKPS
Trigger: AGATGGCTTCAGTTCGGTTCATGGTGACACCGACAA...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558667.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTGTCCGGACTGGTGTCTaGCAAACCTGGAATGTCATC +
Preference number: 4 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSVRTGV*QTWNVI
Trigger: GATGACATTCCAGGTTTGTCAGACACCAGTCCGGAC...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558667.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTCCTGTGATGGAGTTCTaGCTCAGGTCCTCGATGACA +
Preference number: 4 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSPVMEF*LRSSMT
Trigger: TGTCATCGAGGACCTGAGTCAGAACTCCATCACAGG...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGCCTGTGATGGAGTTCTaGCTCAGGTCCTCGATGACA +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVPVMEF*LRSSMT
Trigger: TGTCATCGAGGACCTGAGTCAGAACTCCATCACAGG...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GACTGGTCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTCTCGTAAGTATATGCTaGTATATCACTGTCATGCTC +
Preference number: 4 (lower is better)
Translates to: DWSGRMLSRSWNPSIDFALVSIC*YITVML
Trigger: GAGCATGACAGTGATATATCAGCATATACTTACGAG...AGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGACCAGTC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559523.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCACCTGTGATGGAGTTCTaGCTCAGGTATTACATTTCC +
Preference number: 4 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSPVMEF*LRYYIS
Trigger: GGAAATGTAATACCTGAGTCAGAACTCCATCACAGG...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560164.5
CDS-3UTR GCA 90 bp TCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGTCCCCGATGTACATGGCTGCTaGAAATGTGGTACCAAGATA +
Preference number: 4 (lower is better)
Translates to: SLGHRNLRQRKIYRVIVPDVHGC*KCGTKI
Trigger: TATCTTGGTACCACATTTGCAGCAGCCATGTACATC...GGGGACGATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp TCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCGGACCAAGAAAGCTGTaGCGTAGACACGCATGTTAT +
Preference number: 4 (lower is better)
Translates to: SSSEPMLVNRSIEFRSFTGPRKL*RRHACY
Trigger: ATAACATGCGTGTCTACGGCACAGCTTTCTTGGTCC...GGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTGATGAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGTCTTGATGAAAGGGTaGGGTTACCCAGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSVLMKG*GYPACR
Trigger: TCTGCATGCTGGGTAACCGCACCCTTTCATCAAGAC...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTTTGTCCAAGTCATGTGCACCTTCTCCTGATAGGTTTCTGTCTCTTCGTCCTCGTCTTGATGAAAGGGTaGGGTTACCCAGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: FCPSHVHLLLIGFCLFVLVLMKG*GYPACR
Trigger: TCTGCATGCTGGGTAACCGCACCCTTTCATCAAGAC...GAGGACGAAGAGACAGAAACCTATCAGGAGAAGGTGCACATGACTTGGACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTATGGCCAAGATAAGGTaGCTACCACCAAATTACCTT +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGMAKIR*LPPNYL
Trigger: AAGGTAATTTGGTGGTAGGCACCTTATCTTGGCCAT...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGATGGCCAAGATAAGGTaGCTACCACCAAATTACCTT +
Preference number: 4 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKMAKIR*LPPNYL
Trigger: AAGGTAATTTGGTGGTAGGCACCTTATCTTGGCCAT...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTCTGTCTGTTCCCCATTGGCTTTaGTGTGGCCAAAAACCCTCA +
Preference number: 4 (lower is better)
Translates to: LVNRSIEFRSFTNCASLSVPHWL*CGQKPS
Trigger: TGAGGGTTTTTGGCCACAGCAAAGCCAATGGGGAAC...AGACAGAGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGGTTCCCCATTGGCTTTaGTGTGGCCAAAAACCCTCA +
Preference number: 4 (lower is better)
Translates to: PLTAQTWLERLEHCSDVEVPHWL*CGQKPS
Trigger: TGAGGGTTTTTGGCCACAGCAAAGCCAATGGGGAAC...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCATCTGCCTCCATTAGGTaGTTTATGGTCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TADQMGALLHRYLRLSSSSASIR*FMVCSA
Trigger: TGCTGAGCAGACCATAAAGCACCTAATGGAGGCAGA...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTTCTGCCTCCATTAGGTaGTTTATGGTCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SGRMLSRSWNPSIDFAFCSASIR*FMVCSA
Trigger: TGCTGAGCAGACCATAAAGCACCTAATGGAGGCAGA...ACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp AGTGTGGCTCTAGAACTTCCAATTCCATTGCTAGATGTGCCCTTTAAAAGATGGCCGTGTTGTGCTTCATaGCCCCAAGGCCACATGACT +
Preference number: 4 (lower is better)
Translates to: SVALELPIPLLDVPFKRWPCCAS*PQGHMT
Trigger: AGTCATGTGGCCTTGGGGGCATGAAGCACAACACGG...CCATCTTTTAAAGGGCACATCTAGCAATGGAATTGGAAGTTCTAGAGCCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR GCA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGATCACCACCGTGTTGTaGTTCATGCCCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: FSVMTADQMGALLHRYLRITTVL*FMPPRP
Trigger: TGGCCTTGGGGGCATGAAGCACAACACGGTGGTGAT...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACATCACCACCGTGTTGTaGTTCATGCCCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYITTVL*FMPPRP
Trigger: TGGCCTTGGGGGCATGAAGCACAACACGGTGGTGAT...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGATCACCACCGTGTTGTaGTTCATGCCCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVEITTVL*FMPPRP
Trigger: TGGCCTTGGGGGCATGAAGCACAACACGGTGGTGAT...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTTTTAGCCACCAGCAGTaGAAGATGGGCAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGFSHQQ*KMGSSC
Trigger: ACAACTGCTGCCCATCTTGCACTGCTGGTGGCTAAA...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR GCA 90 bp CCTTCTCCTGATAGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCATTTCGCCACACCTTGTaGTGTTTCAGTAGGAATGGT +
Preference number: 4 (lower is better)
Translates to: PSPDRFLSLRPHQSQCWSFRHTL*CFSRNG
Trigger: ACCATTCCTACTGAAACAGCACAAGGTGTGGCGAAA...TGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCTATCAGGAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCCTACCTCCGCCTCAATaGGTAAGTGATATAGGAAGG +
Preference number: 4 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFLPPPQ*VSDIGR
Trigger: CCTTCCTATATCACTTACGCATTGAGGCGGAGGTAG...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGCTACCTCCGCCTCAATaGGTAAGTGATATAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSELPPPQ*VSDIGR
Trigger: CCTTCCTATATCACTTACGCATTGAGGCGGAGGTAG...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGGTTCCATCATCAAAGTaGGCTCGTAAGTATATGCTG +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARVPSSK*ARKYML
Trigger: CAGCATATACTTACGAGCGCACTTTGATGATGGAAC...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACTTGGATAGCCGCATGTaGCGGAGCATCTGGGACCTT +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYLDSRM*RSIWDL
Trigger: AAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAA...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGTTGGATAGCCGCATGTaGCGGAGCATCTGGGACCTT +
Preference number: 4 (lower is better)
Translates to: AFSVMTADQMGALLHRYLLDSRM*RSIWDL
Trigger: AAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAA...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCGTCTTTCACCAATTGTaGCTCTCTGTCTCGCTCTGT +
Preference number: 4 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFVFHQL*LSVSLC
Trigger: ACAGAGCGAGACAGAGAGGCACAATTGGTGAAAGAC...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCAGTTTCACTGCTGTATaGATCCGCCTCACATTGGAC +
Preference number: 4 (lower is better)
Translates to: EPMLVNRSIEFRSFTNCASFTAV*IRLTLD
Trigger: GTCCAATGTGAGGCGGATGCATACAGCAGTGAAACT...GGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTGTTAGCATGTTTAGGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAAACACCTAGGTCAGCTTaGTCCATGTCCTATTTAGTA +
Preference number: 4 (lower is better)
Translates to: LLACLGGTRIGGILGPQETPRSA*SMSYLV
Trigger: TACTAAATAGGACATGGAGCAAGCTGACCTAGGTGT...TTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCCTAAACATGCTAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGCAAGACACCTCGGACTaGAGCTCAGAGTCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: AFSVMTADQMGALLHRYLQDTSD*SSESWQ
Trigger: TTGCCACGACTCTGAGCTGCAGTCCGAGGTGTCTTG...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCAAGACACCTCGGACTaGAGCTCAGAGTCGTGGCAA +
Preference number: 4 (lower is better)
Translates to: FSVMTADQMGALLHRYLRQDTSD*SSESWQ
Trigger: TTGCCACGACTCTGAGCTGCAGTCCGAGGTGTCTTG...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACAACTGGGTGGATCCAGTaGAACAGTTGCCAGCGAAGT +
Preference number: 4 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTTGWIQ*NSCQRS
Trigger: ACTTCGCTGGCAACTGTTGCACTGGATCCACCCAGT...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGCCGTCGTCTAACAGTTaGCTGTGTTCCCCTGTGATG +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVPSSNS*LCSPVM
Trigger: CATCACAGGGGAACACAGCCAACTGTTAGACGACGG...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTATGAAGGTACCCATTTaGGGGGTCTTGGTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASMKVPI*GVLVGF
Trigger: GAAGCCCACCAAGACCCCCCAAATGGGTACCTTCAT...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAACATCACTGTGAAAGATaGCAGCTCGGGGGACGATAT +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQHHCER*QLGGRY
Trigger: ATATCGTCCCCCGAGCTGCCATCTTTCACAGTGATG...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCATCACTGTGAAAGATaGCAGCTCGGGGGACGATAT +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGHHCER*QLGGRY
Trigger: ATATCGTCCCCCGAGCTGCCATCTTTCACAGTGATG...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTCTGTCTCATCACTGTGAAAGATaGCAGCTCGGGGGACGATAT +
Preference number: 4 (lower is better)
Translates to: LVNRSIEFRSFTNCASLSHHCER*QLGGRY
Trigger: ATATCGTCCCCCGAGCTGCCATCTTTCACAGTGATG...AGACAGAGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGCCATTGGCTTTGCTGTaGCCAAAAACCCTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSEPLALL*PKTLRN
Trigger: GTTTCTGAGGGTTTTTGGCCACAGCAAAGCCAATGG...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTTTCCAAGCTCTGCAATaGCAGCAGTTAGAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGFQALQ*QQLEVK
Trigger: CTTTACTTCTAACTGCTGCCATTGCAGAGCTTGGAA...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCATCGGGGTCTCCAGTTaGGTGTTCGAAGTAATGTTT +
Preference number: 4 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIIGVSS*VFEVMF
Trigger: AAACATTACTTCGAACACCCAACTGGAGACCCCGAT...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CCTCACATTGGACTGGTCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATTACCAGCTATTACCATaGCTACAATGGCATAATACC +
Preference number: 4 (lower is better)
Translates to: PHIGLVRTHVKQVLESFHYQLLP*LQWHNT
Trigger: GGTATTATGCCATTGTAGCCATGGTAATAGCTGGTA...ATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGACCAGTCCAATGTGAGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCACCAGTTTTTAGTGTGTaGAGGTCCTTCCTCCAATCG +
Preference number: 4 (lower is better)
Translates to: TADQMGALLHRYLRLSSSPVFSV*RSFLQS
Trigger: CGATTGGAGGAAGGACCTCCACACACTAAAAACTGG...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCCCAGTTTTTAGTGTGTaGAGGTCCTTCCTCCAATCG +
Preference number: 4 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFPVFSV*RSFLQS
Trigger: CGATTGGAGGAAGGACCTCCACACACTAAAAACTGG...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AAAAGACTTAAGATCCTATCCGCTTTGCCATCCTCAGTGGGCCTGGAGGTTGAACCAGTTTTTAGTGTGTaGAGGTCCTTCCTCCAATCG +
Preference number: 4 (lower is better)
Translates to: KRLKILSALPSSVGLEVEPVFSV*RSFLQS
Trigger: CGATTGGAGGAAGGACCTCCACACACTAAAAACTGG...TTCAACCTCCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTTAAGTCTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp GTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCCCATTAGGTGCTTTATaGTCTGCTCAGCAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: VGSLGHRNLRQRKIYRVIPLGAL*SAQQLK
Trigger: CTTTAGCTGCTGAGCAGACCATAAAGCACCTAATGG...GATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCCCATTAGGTGCTTTATaGTCTGCTCAGCAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIPLGAL*SAQQLK
Trigger: CTTTAGCTGCTGAGCAGACCATAAAGCACCTAATGG...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCACCATTAGGTGCTTTATaGTCTGCTCAGCAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSPLGAL*SAQQLK
Trigger: CTTTAGCTGCTGAGCAGACCATAAAGCACCTAATGG...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGACCAGCAGTGCAAGATaGGCAGCAGTTGTCACTCGA +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVTSSAR*AAVVTR
Trigger: TCGAGTGACAACTGCTGCCCATCTTGCACTGCTGGT...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CCA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATACCAGCAGTGCAAGATaGGCAGCAGTTGTCACTCGA +
Preference number: 4 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYTSSAR*AAVVTR
Trigger: TCGAGTGACAACTGCTGCCCATCTTGCACTGCTGGT...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTACCAGCAGTGCAAGATaGGCAGCAGTTGTCACTCGA +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASTSSAR*AAVVTR
Trigger: TCGAGTGACAACTGCTGCCCATCTTGCACTGCTGGT...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTACCAGCAGTGCAAGATaGGCAGCAGTTGTCACTCGA +
Preference number: 4 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSTSSAR*AAVVTR
Trigger: TCGAGTGACAACTGCTGCCCATCTTGCACTGCTGGT...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CCA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTACCAGCAGTGCAAGATaGGCAGCAGTTGTCACTCGA +
Preference number: 4 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEATSSAR*AAVVTR
Trigger: TCGAGTGACAACTGCTGCCCATCTTGCACTGCTGGT...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CCA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGCTGTTGTCTTCTAATTaGGCTACTGTGAAGATCCGT +
Preference number: 4 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKLLSSN*ATVKIR
Trigger: ACGGATCTTCACAGTAGCCCAATTAGAAGACAACAG...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGCTGTTGTCTTCTAATTaGGCTACTGTGAAGATCCGT +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARLLSSN*ATVKIR
Trigger: ACGGATCTTCACAGTAGCCCAATTAGAAGACAACAG...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTTGTCTCGCTCTGTTTTaGATAGCCGCATGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVCLALF*IAACAG
Trigger: TCCGGCACATGCGGCTATCCAAAACAGAGCGAGACA...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTTGTCTCGCTCTGTTTTaGATAGCCGCATGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEACLALF*IAACAG
Trigger: TCCGGCACATGCGGCTATCCAAAACAGAGCGAGACA...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGATGTTAAGCAGGTCCTaGAATCCTTCCATTGACTTC +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARMLSRS*NPSIDF
Trigger: GAAGTCAATGGAAGGATTCCAGGACCTGCTTAACAT...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGTGGTAGTAATGAGCTaGCACTTCCATGGAGGACGT +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTVVVMS*HFHGGR
Trigger: ACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTGTGGTAGTAATGAGCTaGCACTTCCATGGAGGACGT +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGVVVMS*HFHGGR
Trigger: ACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCATCCTCAGTGGGCCTaGAGGTTGAAGCAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEAHPQWA*RLKQAK
Trigger: CTTTGCTTGCTTCAACCTCCAGGCCCACTGAGGATG...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp GGCTTGGCTAATCTCGTAGTTCAGGGCCAAGTTTCTGTAGTCAGAATGAAGAATCATCCTCAGTGGGCCTaGAGGTTGAAGCAAGCAAAG +
Preference number: 4 (lower is better)
Translates to: GLANLVVQGQVSVVRMKNHPQWA*RLKQAK
Trigger: CTTTGCTTGCTTCAACCTCCAGGCCCACTGAGGATG...ATTCTTCATTCTGACTACAGAAACTTGGCCCTGAACTACGAGATTAGCCAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp ACCAGTTTTCCATGTAACAGTGATTTTGTGTTTCGGGCTGAAGCAGTGGTTATAGGGAACGAGGATTGGTaGGATCCTTGGGCCACAGGA +
Preference number: 4 (lower is better)
Translates to: TSFPCNSDFVFRAEAVVIGNEDW*DPWATG
Trigger: TCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCC...TATAACCACTGCTTCAGCCCGAAACACAAAATCACTGTTACATGGAAAACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTTGCAGCTCAGAGTCGTaGCAAGTCGTAGCTAGTCCA +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVCSSES*QVVASP
Trigger: TGGACTAGCTACGACTTGCCACGACTCTGAGCTGCA...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCTGAAGCCATCTTGGTaGTGGTTTCTGGAGGATGCA +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGLKPSW*WFLEDA
Trigger: TGCATCCTCCAGAAACCACCACCAAGATGGCTTCAG...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558667.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGAGTCCGGTCACTGGGTaGATCCAGTGCAACAGTTGC +
Preference number: 4 (lower is better)
Translates to: FSVMTADQMGALLHRYLRSPVTG*IQCNSC
Trigger: GCAACTGTTGCACTGGATCCACCCAGTGACCGGACT...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGGAGAAGTCCGGTCACTaGGTGGATCCAGTGCAACAG +
Preference number: 4 (lower is better)
Translates to: AFSVMTADQMGALLHRYLEKSGH*VDPVQQ
Trigger: CTGTTGCACTGGATCCACCCAGTGACCGGACTTCTC...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTTCCACTTGGGTCTGGTaGGAAAGGTGCACATGCATA +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGSTWVW*ERCTCI
Trigger: TATGCATGTGCACCTTTCCCACCAGACCCAAGTGGA...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCAGTCAACATTGTCTTaGTGGGCTTCTTTTTCCCTT +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGQSTLS*WASFSL
Trigger: AAGGGAAAAAGAAGCCCACCAAGACAATGTTGACTG...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560164.5
CDS-3UTR TCA 90 bp AATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGATGCCATGTACTTGTCTTTTACAATTGCAAAAGCCTaGAGAACTCCAGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: NPSIDFAFCPRDAMYLSFTIAKA*RTPAVP
Trigger: GGGCACAGCTGGAGTTCTTCAGGCTTTTGCAATTGT...AAAAGACAAGTACATGGCATCCCGGGGACAAAAAGCGAAGTCAATGGAAGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGGGAAATCATAAAGTATaGGCCCCCAGCTGGCACCAC +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVEGNHKV*APSWHH
Trigger: GTGGTGCCAGCTGGGGGCTCATACTTTATGATTTCC...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACGGAAATCATAAAGTATaGGCCCCCAGCTGGCACCAC +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYGNHKV*APSWHH
Trigger: GTGGTGCCAGCTGGGGGCTCATACTTTATGATTTCC...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGGGAAATCATAAAGTATaGGCCCCCAGCTGGCACCAC +
Preference number: 4 (lower is better)
Translates to: AFSVMTADQMGALLHRYLGNHKV*APSWHH
Trigger: GTGGTGCCAGCTGGGGGCTCATACTTTATGATTTCC...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTCATAGGTAAGACTCAAAAGCGGGATCTTATTCAAAAGGCAGGTATTTCCTTTAGTGCGTCATCACTGTaGAAGATGGCAGCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: VIGKTQKRDLIQKAGISFSASSL*KMAARG
Trigger: CCCCCGAGCTGCCATCTTTCACAGTGATGACGCACT...AAAGGAAATACCTGCCTTTTGAATAAGATCCCGCTTTTGAGTCTTACCTATGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATTGGCTGCTGATTCCTTaGGTGCGTCATCACTGTGAA +
Preference number: 4 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYWLLIP*VRHHCE
Trigger: TTCACAGTGATGACGCACTCAAGGAATCAGCAGCCA...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTTGGCTGCTGATTCCTTaGGTGCGTCATCACTGTGAA +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVWLLIP*VRHHCE
Trigger: TTCACAGTGATGACGCACTCAAGGAATCAGCAGCCA...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGTGGCTGCTGATTCCTTaGGTGCGTCATCACTGTGAA +
Preference number: 4 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVWLLIP*VRHHCE
Trigger: TTCACAGTGATGACGCACTCAAGGAATCAGCAGCCA...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTCCAAGATGGACACAATaGCACAGGCCAGGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVPRWTQ*HRPGKV
Trigger: CACTTTTCCTGGCCTGTGTCATTGTGTCCATCTTGG...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACCAAGATGGACACAATaGCACAGGCCAGGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTPRWTQ*HRPGKV
Trigger: CACTTTTCCTGGCCTGTGTCATTGTGTCCATCTTGG...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CCTCACATTGGACTGGTCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATGAAGTGACGTTATTGTaGACAAAGTATTCATCACAG +
Preference number: 4 (lower is better)
Translates to: PHIGLVRTHVKQVLESFHEVTLL*TKYSSQ
Trigger: CTGTGATGAATACTTTGTTCACAATAACGTCACTTC...ATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGACCAGTCCAATGTGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCAAGGAATGCCCTGGATTaGAGTGACGTTATTGTGAAC +
Preference number: 4 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQARNALD*SDVIVN
Trigger: GTTCACAATAACGTCACTTCAATCCAGGGCATTCCT...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTCTGAAGGCTTTTCGATaGTCTCTCCCTTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVLKAFR*SLPWVG
Trigger: ACCTACCCAAGGGAGAGATCATCGAAAAGCCTTCAG...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTCTGAAGGCTTTTCGATaGTCTCTCCCTTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVLKAFR*SLPWVG
Trigger: ACCTACCCAAGGGAGAGATCATCGAAAAGCCTTCAG...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGATCTCCAGATCTGTTTaGTCCAGCCATGATACCTGT +
Preference number: 4 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSEISRSV*SSHDTC
Trigger: ACAGGTATCATGGCTGGATCAAACAGATCTGGAGAT...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCATCTCCAGATCTGTTTaGTCCAGCCATGATACCTGT +
Preference number: 4 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFISRSV*SSHDTC
Trigger: ACAGGTATCATGGCTGGATCAAACAGATCTGGAGAT...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCACCGAACTTGTCTCTaGGAACAACCCCTTCAATAC +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGHRTCL*EQPLQY
Trigger: GTATTGAAGGGGTTGTTCTCAGAGACAAGTTCGGTG...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCACACCGAACTTGTCTCTaGGAACAACCCCTTCAATAC +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSHRTCL*EQPLQY
Trigger: GTATTGAAGGGGTTGTTCTCAGAGACAAGTTCGGTG...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACACACCGAACTTGTCTCTaGGAACAACCCCTTCAATAC +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTHRTCL*EQPLQY
Trigger: GTATTGAAGGGGTTGTTCTCAGAGACAAGTTCGGTG...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGGATCCAGGGAGGCAATaGGTATTCCAAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVDPGRQ*VFQALQ
Trigger: TTGCAGAGCTTGGAATACTCATTGCCTCCCTGGATC...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGTCAATGCCAATCTGTATGCCATTTTAGTAAAGTAGGTAAGGAGAGTAGCCGCGATCCAGGGAGGCAATaGGTATTCCAAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: GQCQSVCHFSKVGKESSRDPGRQ*VFQALQ
Trigger: TTGCAGAGCTTGGAATACTCATTGCCTCCCTGGATC...GCGGCTACTCTCCTTACCTACTTTACTAAAATGGCATACAGATTGGCATTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTGATCCAGGGAGGCAATaGGTATTCCAAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSDPGRQ*VFQALQ
Trigger: TTGCAGAGCTTGGAATACTCATTGCCTCCCTGGATC...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGATCCAGGGAGGCAATaGGTATTCCAAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVDPGRQ*VFQALQ
Trigger: TTGCAGAGCTTGGAATACTCATTGCCTCCCTGGATC...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGATCCAGGGAGGCAATaGGTATTCCAAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVDPGRQ*VFQALQ
Trigger: TTGCAGAGCTTGGAATACTCATTGCCTCCCTGGATC...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACATCCTGCTTTGAGCTGTaGGGCAAAGGTGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTSCFEL*GKGEEA
Trigger: CGCCTCCTCACCTTTGCCTCACAGCTCAAAGCAGGA...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTCATAGGTAAGACTCAAAAGCGGGATCTTATTCAAAAGGCAGGTATTTCCTTTGGCCACATGACTGGATaGGGTGGGAAATGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: VIGKTQKRDLIQKAGISFGHMTG*GGKCPL
Trigger: GAGAGGGCATTTCCCACCTCATCCAGTCATGTGGCC...AAAGGAAATACCTGCCTTTTGAATAAGATCCCGCTTTTGAGTCTTACCTATGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAACTAATTGGGCTACTGTaGAGATCCGTATGCTGCACT +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQLIGLL*RSVCCT
Trigger: AGTGCAGCATACGGATCTTCACAGTAGCCCAATTAG...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACAGCCTCAATGCGTAAGTaGTATAGGAAGGTGGCTAGG +
Preference number: 4 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTASMRK*YRKVAR
Trigger: CCTAGCCACCTTCCTATATCACTTACGCATTGAGGC...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTGCCTCAATGCGTAAGTaGTATAGGAAGGTGGCTAGG +
Preference number: 4 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEAASMRK*YRKVAR
Trigger: CCTAGCCACCTTCCTATATCACTTACGCATTGAGGC...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGCCTCAATGCGTAAGTaGTATAGGAAGGTGGCTAGG +
Preference number: 4 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDASMRK*YRKVAR
Trigger: CCTAGCCACCTTCCTATATCACTTACGCATTGAGGC...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGGCCTCAATGCGTAAGTaGTATAGGAAGGTGGCTAGG +
Preference number: 4 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVASMRK*YRKVAR
Trigger: CCTAGCCACCTTCCTATATCACTTACGCATTGAGGC...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp CCTCACATTGGACTGGTCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATCTCGTAAGTATATGCTaGTATATCACTGTCATGCAT +
Preference number: 4 (lower is better)
Translates to: PHIGLVRTHVKQVLESFHLVSIC*YITVMH
Trigger: ATGCATGACAGTGATATATCAGCATATACTTACGAG...ATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGACCAGTCCAATGTGAGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559664.5
CDS-3UTR TCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTCTGGAATCCTTCCATTaGCTTCGCTTTTTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVLESFH*LRFLSP
Trigger: CGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAG...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCGTTATGAATAAATGGTaGTCACTTCACTGCCACCAC +
Preference number: 4 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIVMNKW*SLHCHH
Trigger: GTGGTGGCAGTGAAGTGATCACCATTTATTCATAAC...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAACACAGGCTTCTAGTTaGGTGGGAGTGGTAGTAATG +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSTQASS*VGVVVM
Trigger: CATTACTACCACTCCCACTCAACTAGAAGCCTGTGT...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTACACAGGCTTCTAGTTaGGTGGGAGTGGTAGTAATG +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGTQASS*VGVVVM
Trigger: CATTACTACCACTCCCACTCAACTAGAAGCCTGTGT...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCATTCTAATTTGCCTTTaGCTGCTCAGACGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: SSSEPMLVNRSIEFRSFTILICL*LLRRGL
Trigger: CAAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAAT...GGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTGATGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGATTCTAATTTGCCTTTaGCTGCTCAGACGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSEILICL*LLRRGL
Trigger: CAAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAAT...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACACTACTTTTGAACTACTaGGAGAAGGGTGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTLLLNY*EKGEQR
Trigger: CCTCTGCTCACCCTTCTCTCAGTAGTTCAAAAGTAG...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354181.8
CDS-3UTR TCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGCACCATGAACCGAACTaGAGCCATCTTGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVEHHEPN*SHLGGG
Trigger: ACCACCACCAAGATGGCTTCAGTTCGGTTCATGGTG...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558667.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGGTCCGGACTGGTGTCTaGCAAACCTGGAATGTCATC +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVEVRTGV*QTWNVI
Trigger: GATGACATTCCAGGTTTGTCAGACACCAGTCCGGAC...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558667.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGATGACATCCTGGGGGTaGGAAGTCCGGTCACTGGGT +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRMTSWG*EVRSLG
Trigger: ACCCAGTGACCGGACTTCTCACCCCCAGGATGTCAT...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGCCTGTGATGGAGTTCTaGCTCAGGTCCTCGATGACA +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVEPVMEF*LRSSMT
Trigger: TGTCATCGAGGACCTGAGTCAGAACTCCATCACAGG...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGTTCTCCATGGTGGGGTaGCAGGTCCTAGAAGGACAA +
Preference number: 4 (lower is better)
Translates to: AFSVMTADQMGALLHRYLFSMVG*QVLEGQ
Trigger: TTGTCCTTCTAGGACCTGTCACCCCACCATGGAGAA...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000354181.8
CDS-3UTR TCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTCTGACAAACACTACTaGGAGAAGGGTGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVSDKHY*EKGEQR
Trigger: CCTCTGCTCACCCTTCTCTCAGTAGTGTTTGTCAGA...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000458406.6
ENST00000559523.5
CDS-3UTR TCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACGTTCCTCATTCGAGGTaGACCTTGCGAAGAGAAGCC +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYVPHSR*TLRREA
Trigger: GGCTTCTCTTCGCAAGGTTCACCTCGAATGAGGAAC...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000561080.5
CDS-3UTR GCA 90 bp TCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGTCCCCTTCAGTGATGTTTTCTaGCTCTTCATGTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: SLGHRNLRQRKIYRVIVPFSDVF*LFMFLC
Trigger: GCAAAGGAACATGAAGAGGCAGAAAACATCACTGAA...GGGGACGATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGGACCAAGAAAGCTGTaGCGTAGACACGCATGTTAT +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSGPRKL*RRHACY
Trigger: ATAACATGCGTGTCTACGGCACAGCTTTCTTGGTCC...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGACCAAGAAAGCTGTaGCGTAGACACGCATGTTAT +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTGPRKL*RRHACY
Trigger: ATAACATGCGTGTCTACGGCACAGCTTTCTTGGTCC...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGGGACCAAGAAAGCTGTaGCGTAGACACGCATGTTAT +
Preference number: 4 (lower is better)
Translates to: PLTAQTWLERLEHCSDVEGPRKL*RRHACY
Trigger: ATAACATGCGTGTCTACGGCACAGCTTTCTTGGTCC...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTTTGTCCAAGTCATGTGCACCTTCTCCTGATAGGTTTCTGTCTCTTCGTCCTCGGACCAAGAAAGCTGTaGCGTAGACACGCATGTTAT +
Preference number: 4 (lower is better)
Translates to: FCPSHVHLLLIGFCLFVLGPRKL*RRHACY
Trigger: ATAACATGCGTGTCTACGGCACAGCTTTCTTGGTCC...GAGGACGAAGAGACAGAAACCTATCAGGAGAAGGTGCACATGACTTGGACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTGTCTTGATGAAAGGGTaGGGTTACCCAGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSVLMKG*GYPACR
Trigger: TCTGCATGCTGGGTAACCGCACCCTTTCATCAAGAC...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGTCTTGATGAAAGGGTaGGGTTACCCAGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVVLMKG*GYPACR
Trigger: TCTGCATGCTGGGTAACCGCACCCTTTCATCAAGAC...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGGTCTTGATGAAAGGGTaGGGTTACCCAGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVVLMKG*GYPACR
Trigger: TCTGCATGCTGGGTAACCGCACCCTTTCATCAAGAC...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCATGGCCAAGATAAGGTaGCTACCACCAAATTACCTT +
Preference number: 4 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIMAKIR*LPPNYL
Trigger: AAGGTAATTTGGTGGTAGGCACCTTATCTTGGCCAT...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCATGGCCAAGATAAGGTaGCTACCACCAAATTACCTT +
Preference number: 4 (lower is better)
Translates to: VGSLGHRNLRQRKIYRVIMAKIR*LPPNYL
Trigger: AAGGTAATTTGGTGGTAGGCACCTTATCTTGGCCAT...GATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTGTTCCCCATTGGCTTTaGTGTGGCCAAAAACCCTCA +
Preference number: 4 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSVPHWL*CGQKPS
Trigger: TGAGGGTTTTTGGCCACAGCAAAGCCAATGGGGAAC...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTGTTCCCCATTGGCTTTaGTGTGGCCAAAAACCCTCA +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASVPHWL*CGQKPS
Trigger: TGAGGGTTTTTGGCCACAGCAAAGCCAATGGGGAAC...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTGTTAGCATGTTTAGGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAAGTTCGAAGTAATGTTTaGAAGGCACATGCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: LLACLGGTRIGGILGPQEVRSNV*KAHAKF
Trigger: AAACTTGGCATGTGCCTTGCAAACATTACTTCGAAC...TTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCCTAAACATGCTAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp CTCCAACCACAAACAGCACTTCTAAAACTAACTTTACTTTCTGCCCATAATTTGCAAAGCAAACCGGGCTaGACTGAGGGACAGCCCACG +
Preference number: 4 (lower is better)
Translates to: LQPQTALLKLTLLSAHNLQSKPG*TEGQPT
Trigger: CGTGGGCTGTCCCTCAGTGCAGCCCGGTTTGCTTTG...CAAATTATGGGCAGAAAGTAAAGTTAGTTTTAGAAGTGCTGTTTGTGGTTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCATCTGCCTCCATTAGGTaGTTTATGGTCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSSASIR*FMVCSA
Trigger: TGCTGAGCAGACCATAAAGCACCTAATGGAGGCAGA...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACATCTGCCTCCATTAGGTaGTTTATGGTCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTSASIR*FMVCSA
Trigger: TGCTGAGCAGACCATAAAGCACCTAATGGAGGCAGA...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTTTAGCCACCAGCAGTaGAAGATGGGCAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSFSHQQ*KMGSSC
Trigger: ACAACTGCTGCCCATCTTGCACTGCTGGTGGCTAAA...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR GCA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATTTTAGCCACCAGCAGTaGAAGATGGGCAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDFSHQQ*KMGSSC
Trigger: ACAACTGCTGCCCATCTTGCACTGCTGGTGGCTAAA...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR GCA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTTTTAGCCACCAGCAGTaGAAGATGGGCAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEAFSHQQ*KMGSSC
Trigger: ACAACTGCTGCCCATCTTGCACTGCTGGTGGCTAAA...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR GCA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCATTTCGCCACACCTTGTaGTGTTTCAGTAGGAATGGT +
Preference number: 4 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQAFRHTL*CFSRNG
Trigger: ACCATTCCTACTGAAACAGCACAAGGTGTGGCGAAA...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCTTTCGCCACACCTTGTaGTGTTTCAGTAGGAATGGT +
Preference number: 4 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFFRHTL*CFSRNG
Trigger: ACCATTCCTACTGAAACAGCACAAGGTGTGGCGAAA...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCTTTCGCCACACCTTGTaGTGTTTCAGTAGGAATGGT +
Preference number: 4 (lower is better)
Translates to: SSSEPMLVNRSIEFRSFTFRHTL*CFSRNG
Trigger: ACCATTCCTACTGAAACAGCACAAGGTGTGGCGAAA...GGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTGATGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCAGATATATCACTGTCATaGATCTCCACCACTTCTACC +
Preference number: 4 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSDISLS*ISTTST
Trigger: GGTAGAAGTGGTGGAGATGCATGACAGTGATATATC...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR GCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCGTTCCATCATCAAAGTaGGCTCGTAAGTATATGCTG +
Preference number: 4 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIVPSSK*ARKYML
Trigger: CAGCATATACTTACGAGCGCACTTTGATGATGGAAC...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCAGTTCCATCATCAAAGTaGGCTCGTAAGTATATGCTG +
Preference number: 4 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSVPSSK*ARKYML
Trigger: CAGCATATACTTACGAGCGCACTTTGATGATGGAAC...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCCTCATCAGAGCCAATaGTGGTCAATCGTAGCATTG +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGPHQSQ*WSIVAL
Trigger: CAATGCTACGATTGACCAGCATTGGCTCTGATGAGG...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAAGTTTCACTGCTGTATaGATCCGCCTCACATTGGAC +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQSFTAV*IRLTLD
Trigger: GTCCAATGTGAGGCGGATGCATACAGCAGTGAAACT...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTAGTTTCACTGCTGTATaGATCCGCCTCACATTGGAC +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGSFTAV*IRLTLD
Trigger: GTCCAATGTGAGGCGGATGCATACAGCAGTGAAACT...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGAGTTTCACTGCTGTATaGATCCGCCTCACATTGGAC +
Preference number: 4 (lower is better)
Translates to: PLTAQTWLERLEHCSDVESFTAV*IRLTLD
Trigger: GTCCAATGTGAGGCGGATGCATACAGCAGTGAAACT...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTCTCGTTGAGTTTCACTaGTGTATGCATCCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVLVEFH*CMHPPH
Trigger: GTGAGGCGGATGCATACAGCAGTGAAACTCAACGAG...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTCTCGTTGAGTTTCACTaGTGTATGCATCCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVLVEFH*CMHPPH
Trigger: GTGAGGCGGATGCATACAGCAGTGAAACTCAACGAG...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGGCTGGAGTGCAGTGGTaGAATCTCGGTTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: FSVMTADQMGALLHRYLRAGVQW*NLGSLQ
Trigger: TTGCAGTGAACCGAGATTGCACCACTGCACTCCAGC...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR GCA 90 bp ACCAGTTTTCCATGTAACAGTGATTTTGTGTTTCGGGCTGAAGCAGTGGTTATAAGATCCTATCCGCTTTaGCATCCTCAGTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TSFPCNSDFVFRAEAVVIRSYPL*HPQWAW
Trigger: CCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCT...TATAACCACTGCTTCAGCCCGAAACACAAAATCACTGTTACATGGAAAACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp GTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCCTGTCAAGCAGATGCTaGAGTTCAAACTTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: VGSLGHRNLRQRKIYRVILSSRC*SSNFSF
Trigger: AAAGCTGAAGTTTGAACTGCAGCATCTGCTTGACAG...GATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp CTCCAACCACAAACAGCACTTCTAAAACTAACTTTACTTTCTGCCCATAATTTGGTGAGCAGAGGAGGATaGAGGGGCAGAGCGGATTCC +
Preference number: 4 (lower is better)
Translates to: LQPQTALLKLTLLSAHNLVSRGG*RGRADS
Trigger: GGAATCCGCTCTGCCCCTGCATCCTCCTCTGCTCAC...CAAATTATGGGCAGAAAGTAAAGTTAGTTTTAGAAGTGCTGTTTGTGGTTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATATCCAGTGCAACAGTTaGCAGCGAAGTGGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHIQCNS*QRSGGP
Trigger: GGGGCCACCACTTCGCTGGCAACTGTTGCACTGGAT...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGACTGGGTGGATCCAGTaGAACAGTTGCCAGCGAAGT +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVETGWIQ*NSCQRS
Trigger: ACTTCGCTGGCAACTGTTGCACTGGATCCACCCAGT...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAAGACACCTTCGGTCTaGTGTCCATTTCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: TADQMGALLHRYLRLSSSKTPSV*CPFLPQ
Trigger: TTGAGGAAGAAATGGACACCAGACCGAAGGTGTCTT...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGATGAAGGTACCCATTTaGGGGGTCTTGGTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: FSVMTADQMGALLHRYLRMKVPI*GVLVGF
Trigger: GAAGCCCACCAAGACCCCCCAAATGGGTACCTTCAT...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCATCACTGTGAAAGATaGCAGCTCGGGGGACGATAT +
Preference number: 4 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEAHHCER*QLGGRY
Trigger: ATATCGTCCCCCGAGCTGCCATCTTTCACAGTGATG...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGCATCACTGTGAAAGATaGCAGCTCGGGGGACGATAT +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVHHCER*QLGGRY
Trigger: ATATCGTCCCCCGAGCTGCCATCTTTCACAGTGATG...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACATCACTGTGAAAGATaGCAGCTCGGGGGACGATAT +
Preference number: 4 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTHHCER*QLGGRY
Trigger: ATATCGTCCCCCGAGCTGCCATCTTTCACAGTGATG...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATCATCACTGTGAAAGATaGCAGCTCGGGGGACGATAT +
Preference number: 4 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYHHCER*QLGGRY
Trigger: ATATCGTCCCCCGAGCTGCCATCTTTCACAGTGATG...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGCATCACTGTGAAAGATaGCAGCTCGGGGGACGATAT +
Preference number: 4 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVHHCER*QLGGRY
Trigger: ATATCGTCCCCCGAGCTGCCATCTTTCACAGTGATG...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAATCCAGGAATGCCCTaGATTGAAGTGACGTTATTG +
Preference number: 4 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLINPGMP*IEVTLL
Trigger: CAATAACGTCACTTCAATCCAGGGCATTCCTGGATT...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTCTGTCTCCCATTGGCTTTGCTGTaGCCAAAAACCCTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: WSIVALSFGLSPIVPLCLPLALL*PKTLRN
Trigger: GTTTCTGAGGGTTTTTGGCCACAGCAAAGCCAATGG...GAGACAGAGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACACCATTGGCTTTGCTGTaGCCAAAAACCCTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTPLALL*PKTLRN
Trigger: GTTTCTGAGGGTTTTTGGCCACAGCAAAGCCAATGG...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCATCGGGGTCTCCAGTTaGGTGTTCGAAGTAATGTTT +
Preference number: 4 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFIGVSS*VFEVMF
Trigger: AAACATTACTTCGAACACCCAACTGGAGACCCCGAT...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTGTTAGCATGTTTAGGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATACCAGCTATTACCATaGCTACAATGGCATAATACC +
Preference number: 4 (lower is better)
Translates to: LLACLGGTRIGGILGPQEYQLLP*LQWHNT
Trigger: GGTATTATGCCATTGTAGCCATGGTAATAGCTGGTA...TTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCCTAAACATGCTAACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGTACCAGCTATTACCATaGCTACAATGGCATAATACC +
Preference number: 4 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKYQLLP*LQWHNT
Trigger: GGTATTATGCCATTGTAGCCATGGTAATAGCTGGTA...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTTACCAGCTATTACCATaGCTACAATGGCATAATACC +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGYQLLP*LQWHNT
Trigger: GGTATTATGCCATTGTAGCCATGGTAATAGCTGGTA...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAACCAGTTTTTAGTGTGTaGAGGTCCTTCCTCCAATCG +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQPVFSV*RSFLQS
Trigger: CGATTGGAGGAAGGACCTCCACACACTAAAAACTGG...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACACCAGTTTTTAGTGTGTaGAGGTCCTTCCTCCAATCG +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTPVFSV*RSFLQS
Trigger: CGATTGGAGGAAGGACCTCCACACACTAAAAACTGG...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCACTGTTGTCTTCTAATTaGGCTACTGTGAAGATCCGT +
Preference number: 4 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSLLSSN*ATVKIR
Trigger: ACGGATCTTCACAGTAGCCCAATTAGAAGACAACAG...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGATGTGCCGGAGCATCTaGGACCTTTGTTCCATCATC +
Preference number: 4 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVMCRSI*DLCSII
Trigger: GATGATGGAACAAAGGTCCCAGATGCTCCGGCACAT...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTATGTGCCGGAGCATCTaGGACCTTTGTTCCATCATC +
Preference number: 4 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSMCRSI*DLCSII
Trigger: GATGATGGAACAAAGGTCCCAGATGCTCCGGCACAT...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGATGTGCCGGAGCATCTaGGACCTTTGTTCCATCATC +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVMCRSI*DLCSII
Trigger: GATGATGGAACAAAGGTCCCAGATGCTCCGGCACAT...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACTGTCTCGCTCTGTTTTaGATAGCCGCATGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYCLALF*IAACAG
Trigger: TCCGGCACATGCGGCTATCCAAAACAGAGCGAGACA...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAGCATCCGCCTCACATTaGACTGGTCCGGACGCATGT +
Preference number: 4 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTASASH*TGPDAC
Trigger: ACATGCGTCCGGACCAGTCCAATGTGAGGCGGATGC...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTACCAGCTTTGCTTCATaGGACTTGTTAACTATAACC +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGTSFAS*DLLTIT
Trigger: GGTTATAGTTAACAAGTCCCATGAAGCAAAGCTGGT...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGGTGGTAGTAATGAGCTaGCACTTCCATGGAGGACGT +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVVVVMS*HFHGGR
Trigger: ACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTGTGGTAGTAATGAGCTaGCACTTCCATGGAGGACGT +
Preference number: 4 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSVVVMS*HFHGGR
Trigger: ACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAATGTTTGCATCTTaGCTTGCCGAGGATAATAGG +
Preference number: 4 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKKMFAS*LAEDNR
Trigger: CCTATTATCCTCGGCAAGCCAAGATGCAAACATTTT...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTAAAATGTTTGCATCTTaGCTTGCCGAGGATAATAGG +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGKMFAS*LAEDNR
Trigger: CCTATTATCCTCGGCAAGCCAAGATGCAAACATTTT...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTGGGCCTTTAAGATACTaGATCCTGGTTGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSGPLRY*ILVGHS
Trigger: ACTGTGCCCAACCAGGATCCAGTATCTTAAAGGCCC...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp GGTCAATGCCAATCTGTATGCCATTTTAGTAAAGTAGGTAAGGAGAGTAGCCGCGGGCCTTTAAGATACTaGATCCTGGTTGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: GQCQSVCHFSKVGKESSRGPLRY*ILVGHS
Trigger: ACTGTGCCCAACCAGGATCCAGTATCTTAAAGGCCC...GCGGCTACTCTCCTTACCTACTTTACTAAAATGGCATACAGATTGGCATTGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGTGCAGCTCAGAGTCGTaGCAAGTCGTAGCTAGTCCA +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVECSSES*QVVASP
Trigger: TGGACTAGCTACGACTTGCCACGACTCTGAGCTGCA...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAAGCCATCTTGGTGGTaGTTTCTGGAGGATGCATTT +
Preference number: 4 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFKPSWW*FLEDAF
Trigger: AAATGCATCCTCCAGAAACCACCACCAAGATGGCTT...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558667.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCAAGCCATCTTGGTGGTaGTTTCTGGAGGATGCATTT +
Preference number: 4 (lower is better)
Translates to: EPMLVNRSIEFRSFTNCAKPSWW*FLEDAF
Trigger: AAATGCATCCTCCAGAAACCACCACCAAGATGGCTT...GGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAAGCCATCTTGGTGGTaGTTTCTGGAGGATGCATTT +
Preference number: 4 (lower is better)
Translates to: TADQMGALLHRYLRLSSSKPSWW*FLEDAF
Trigger: AAATGCATCCTCCAGAAACCACCACCAAGATGGCTT...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AAAAGACTTAAGATCCTATCCGCTTTGCCATCCTCAGTGGGCCTGGAGGTTGAAAAGCCATCTTGGTGGTaGTTTCTGGAGGATGCATTT +
Preference number: 4 (lower is better)
Translates to: KRLKILSALPSSVGLEVEKPSWW*FLEDAF
Trigger: AAATGCATCCTCCAGAAACCACCACCAAGATGGCTT...TTCAACCTCCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTTAAGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTCTGAAGCCATCTTGGTaGTGGTTTCTGGAGGATGCA +
Preference number: 4 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSLKPSW*WFLEDA
Trigger: TGCATCCTCCAGAAACCACCACCAAGATGGCTTCAG...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558667.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACTGAAGCCATCTTGGTaGTGGTTTCTGGAGGATGCA +
Preference number: 4 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTLKPSW*WFLEDA
Trigger: TGCATCCTCCAGAAACCACCACCAAGATGGCTTCAG...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558667.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTGAACTGAAGCCATCTTaGTGGTGGTTTCTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGELKPS*WWFLED
Trigger: ATCCTCCAGAAACCACCACCAAGATGGCTTCAGTTC...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558667.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGTCCACTTGGGTCTGGTaGGAAAGGTGCACATGCATA +
Preference number: 4 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVSTWVW*ERCTCI
Trigger: TATGCATGTGCACCTTTCCCACCAGACCCAAGTGGA...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676379.1
CDS-3UTR CCA 90 bp AAAAGACTTAAGATCCTATCCGCTTTGCCATCCTCAGTGGGCCTGGAGGTTGAACAGGCGACTATAGCGTaGATCAGATTGCTAAAAGGT +
Preference number: 4 (lower is better)
Translates to: KRLKILSALPSSVGLEVEQATIA*IRLLKG
Trigger: ACCTTTTAGCAATCTGATCCACGCTATAGTCGCCTG...TTCAACCTCCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTTAAGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676379.1
CDS-3UTR TCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACCAGGTCTGGTTCATCTaGATCCTGAATCCGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYQVWFI*ILNPGF
Trigger: AAAGCCCGGATTCAGGATTCAGATGAACCAGACCTG...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290209.9
CDS-3UTR TCA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATGGCTGTGTTCCCCTGTaGTGGAGTTCTGACTCAGGT +
Preference number: 4 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHGCVPL*WSSDSG
Trigger: ACCTGAGTCAGAACTCCATCACAGGGGAACACAGCC...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGACAATTGCAAAAGCCTaGAGAACTCCAGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: AFSVMTADQMGALLHRYLTIAKA*RTPAVP
Trigger: GGGCACAGCTGGAGTTCTTCAGGCTTTTGCAATTGT...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGACAATTGCAAAAGCCTaGAGAACTCCAGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVETIAKA*RTPAVP
Trigger: GGGCACAGCTGGAGTTCTTCAGGCTTTTGCAATTGT...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGACAATTGCAAAAGCCTaGAGAACTCCAGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: FSVMTADQMGALLHRYLRTIAKA*RTPAVP
Trigger: GGGCACAGCTGGAGTTCTTCAGGCTTTTGCAATTGT...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CTCCAACCACAAACAGCACTTCTAAAACTAACTTTACTTTCTGCCCATAATTTGAGTGCGTCATCACTGTaGAAGATGGCAGCTCGGGGG +
Preference number: 4 (lower is better)
Translates to: LQPQTALLKLTLLSAHNLSASSL*KMAARG
Trigger: CCCCCGAGCTGCCATCTTTCACAGTGATGACGCACT...CAAATTATGGGCAGAAAGTAAAGTTAGTTTTAGAAGTGCTGTTTGTGGTTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp AGTGTGGCTCTAGAACTTCCAATTCCATTGCTAGATGTGCCCTTTAAAAGATGGTGGCTGCTGATTCCTTaGGTGCGTCATCACTGTGAA +
Preference number: 4 (lower is better)
Translates to: SVALELPIPLLDVPFKRWWLLIP*VRHHCE
Trigger: TTCACAGTGATGACGCACTCAAGGAATCAGCAGCCA...CCATCTTTTAAAGGGCACATCTAGCAATGGAATTGGAAGTTCTAGAGCCACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGTGGCTGCTGATTCCTTaGGTGCGTCATCACTGTGAA +
Preference number: 4 (lower is better)
Translates to: AFSVMTADQMGALLHRYLWLLIP*VRHHCE
Trigger: TTCACAGTGATGACGCACTCAAGGAATCAGCAGCCA...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTGAGCAAAAGAAGACTTaGTGGCTCCAGCATAGATGG +
Preference number: 4 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSEQKKT*WLQHRW
Trigger: CCATCTATGCTGGAGCCATCAAGTCTTCTTTTGCTC...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGCATCACAGGTGGCATTaGAAAATTGACTCGAGTTAC +
Preference number: 4 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSEHHRWH*KIDSSY
Trigger: GTAACTCGAGTCAATTTTTCAATGCCACCTGTGATG...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCCATCACAGGTGGCATTaGAAAATTGACTCGAGTTAC +
Preference number: 4 (lower is better)
Translates to: SSSEPMLVNRSIEFRSFTHHRWH*KIDSSY
Trigger: GTAACTCGAGTCAATTTTTCAATGCCACCTGTGATG...GGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTGATGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCATCACAGGTGGCATTaGAAAATTGACTCGAGTTAC +
Preference number: 4 (lower is better)
Translates to: SGRMLSRSWNPSIDFAFCHHRWH*KIDSSY
Trigger: GTAACTCGAGTCAATTTTTCAATGCCACCTGTGATG...ACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGGAAGTGACGTTATTGTaGACAAAGTATTCATCACAG +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQAREVTLL*TKYSSQ
Trigger: CTGTGATGAATACTTTGTTCACAATAACGTCACTTC...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCATGCCCTGGATTGAAGTaGCGTTATTGTGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: TADQMGALLHRYLRLSSSCPGLK*RYCEQS
Trigger: ACTTTGTTCACAATAACGTCACTTCAATCCAGGGCA...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGTGCCCTGGATTGAAGTaGCGTTATTGTGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: RFLSLRPHQSQCWSIVALCPGLK*RYCEQS
Trigger: ACTTTGTTCACAATAACGTCACTTCAATCCAGGGCA...CAATGCTACGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAAGGAATGCCCTGGATTaGAGTGACGTTATTGTGAAC +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQRNALD*SDVIVN
Trigger: GTTCACAATAACGTCACTTCAATCCAGGGCATTCCT...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGATCTCCAGATCTGTTTaGTCCAGCCATGATACCTGT +
Preference number: 4 (lower is better)
Translates to: PLTAQTWLERLEHCSDVEISRSV*SSHDTC
Trigger: ACAGGTATCATGGCTGGATCAAACAGATCTGGAGAT...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTCACCGAACTTGTCTCTaGGAACAACCCCTTCAATAC +
Preference number: 4 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSHRTCL*EQPLQY
Trigger: GTATTGAAGGGGTTGTTCTCAGAGACAAGTTCGGTG...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGGATCCAGGGAGGCAATaGGTATTCCAAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: AFSVMTADQMGALLHRYLDPGRQ*VFQALQ
Trigger: TTGCAGAGCTTGGAATACTCATTGCCTCCCTGGATC...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGAGTAATACAAGCAACTaGGGCCTCCAGTTTTTAGTG +
Preference number: 4 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSESNTSN*GLQFLV
Trigger: CACTAAAAACTGGAGGCCTCAGTTGCTTGTATTACT...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACTAATTGGGCTACTGTaGAGATCCGTATGCTGCACT +
Preference number: 4 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTLIGLL*RSVCCT
Trigger: AGTGCAGCATACGGATCTTCACAGTAGCCCAATTAG...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATCTAATTGGGCTACTGTaGAGATCCGTATGCTGCACT +
Preference number: 4 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYLIGLL*RSVCCT
Trigger: AGTGCAGCATACGGATCTTCACAGTAGCCCAATTAG...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTCTAATTGGGCTACTGTaGAGATCCGTATGCTGCACT +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVLIGLL*RSVCCT
Trigger: AGTGCAGCATACGGATCTTCACAGTAGCCCAATTAG...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTCTAATTGGGCTACTGTaGAGATCCGTATGCTGCACT +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVLIGLL*RSVCCT
Trigger: AGTGCAGCATACGGATCTTCACAGTAGCCCAATTAG...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGCTCGTAAGTATATGCTaGTATATCACTGTCATGCAT +
Preference number: 4 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARLVSIC*YITVMH
Trigger: ATGCATGACAGTGATATATCAGCATATACTTACGAG...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR TCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCGTTATGAATAAATGGTaGTCACTTCACTGCCACCAC +
Preference number: 4 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFVMNKW*SLHCHH
Trigger: GTGGTGGCAGTGAAGTGATCACCATTTATTCATAAC...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGTCAATGCCAATCTGTATGCCATTTTAGTAAAGTAGGTAAGGAGAGTAGCCGCACACAGGCTTCTAGTTaGGTGGGAGTGGTAGTAATG +
Preference number: 4 (lower is better)
Translates to: GQCQSVCHFSKVGKESSRTQASS*VGVVVM
Trigger: CATTACTACCACTCCCACTCAACTAGAAGCCTGTGT...GCGGCTACTCTCCTTACCTACTTTACTAAAATGGCATACAGATTGGCATTGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTACACAGGCTTCTAGTTaGGTGGGAGTGGTAGTAATG +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASTQASS*VGVVVM
Trigger: CATTACTACCACTCCCACTCAACTAGAAGCCTGTGT...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATACACAGGCTTCTAGTTaGGTGGGAGTGGTAGTAATG +
Preference number: 4 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYTQASS*VGVVVM
Trigger: CATTACTACCACTCCCACTCAACTAGAAGCCTGTGT...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGACACAGGCTTCTAGTTaGGTGGGAGTGGTAGTAATG +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVTQASS*VGVVVM
Trigger: CATTACTACCACTCCCACTCAACTAGAAGCCTGTGT...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGATCAAGAGTTCAGTATaGTGTGTACAGAACACAGGC +
Preference number: 4 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSEIKSSV*CVQNTG
Trigger: GCCTGTGTTCTGTACACATCATACTGAACTCTTGAT...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAATTTTACACAGGTACTTaGGGCTCAGCTCATCAAGAG +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQFYTGT*GSAHQE
Trigger: CTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAA...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTATTCTAATTTGCCTTTaGCTGCTCAGACGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGILICL*LLRRGL
Trigger: CAAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAAT...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGAGTTCGAGACCAGCCTaGCCAACATCAGTTTCAGTA +
Preference number: 4 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVSSRPA*PTSVSV
Trigger: TACTGAAACTGATGTTGGTCAGGCTGGTCTCGAACT...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTTGGGCCACAGGAATCTaGGGCAACGGAAGATATATA +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVWATGI*GNGRYI
Trigger: TATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCA...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGTGGGCCACAGGAATCTaGGGCAACGGAAGATATATA +
Preference number: 4 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVWATGI*GNGRYI
Trigger: TATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCA...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp CTCCAACCACAAACAGCACTTCTAAAACTAACTTTACTTTCTGCCCATAATTTGCTACTGAGAGAAGGGTaGGCAGAGGAGGATGCAGGG +
Preference number: 4 (lower is better)
Translates to: LQPQTALLKLTLLSAHNLLLREG*AEEDAG
Trigger: CCCTGCATCCTCCTCTGCTCACCCTTCTCTCAGTAG...CAAATTATGGGCAGAAAGTAAAGTTAGTTTTAGAAGTGCTGTTTGTGGTTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp ACCAGTTTTCCATGTAACAGTGATTTTGTGTTTCGGGCTGAAGCAGTGGTTATAGTCCGGACTGGTGTCTaGCAAACCTGGAATGTCATC +
Preference number: 4 (lower is better)
Translates to: TSFPCNSDFVFRAEAVVIVRTGV*QTWNVI
Trigger: GATGACATTCCAGGTTTGTCAGACACCAGTCCGGAC...TATAACCACTGCTTCAGCCCGAAACACAAAATCACTGTTACATGGAAAACTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAATGCCAATCTTGTGTaGCTTCTTTCCTTCAGAATG +
Preference number: 4 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLINANLV*LLSFRM
Trigger: CATTCTGAAGGAAAGAAGTCACACAAGATTGGCATT...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CTCCTGATAGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGCTCGTAAGTATATGCTaGTATATCACTGTCATGCTC +
Preference number: 4 (lower is better)
Translates to: LLIGFCLFVLIRANAGQSLVSIC*YITVML
Trigger: GAGCATGACAGTGATATATCAGCATATACTTACGAG...CGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCTATCAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559523.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCATTACATTTCCTGGAGTaGTCACAGGGACCATTAAGG +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSLHFLE*SQGPLR
Trigger: CCTTAATGGTCCCTGTGATCACTCCAGGAAATGTAA...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560164.5
CDS-3UTR GCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTCCAGTTAGTTTTCCCTaGCTACCTCTTCCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVPVSFP*LPLPCC
Trigger: ACAGCAAGGAAGAGGTAGGCAGGGAAAACTAACTGG...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290209.9
CDS-3UTR GCA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGTGATGTTTTCTaGCTCTTCATGTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSFSDVF*LFMFLC
Trigger: GCAAAGGAACATGAAGAGGCAGAAAACATCACTGAA...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCGATGTACATGGCTGCTaGAAATGTGGTACCAAGATA +
Preference number: 4 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFDVHGC*KCGTKI
Trigger: TATCTTGGTACCACATTTGCAGCAGCCATGTACATC...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAGATGTACATGGCTGCTaGAAATGTGGTACCAAGATA +
Preference number: 4 (lower is better)
Translates to: TADQMGALLHRYLRLSSSDVHGC*KCGTKI
Trigger: TATCTTGGTACCACATTTGCAGCAGCCATGTACATC...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACAGGACCAAGAAAGCTGTaGCGTAGACACGCATGTTAT +
Preference number: 4 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTGPRKL*RRHACY
Trigger: ATAACATGCGTGTCTACGGCACAGCTTTCTTGGTCC...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGTCCCCAACCCCTTCAATACATaGACCAAAAAGGACAACATT +
Preference number: 4 (lower is better)
Translates to: SLGHRNLRQRKIYRVIVPNPFNT*TKKDNI
Trigger: AATGTTGTCCTTTTTGGTGCATGTATTGAAGGGGTT...GGGGACGATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp TTGTTAGCATGTTTAGGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAAAACCCCTTCAATACATaGACCAAAAAGGACAACATT +
Preference number: 4 (lower is better)
Translates to: LLACLGGTRIGGILGPQENPFNT*TKKDNI
Trigger: AATGTTGTCCTTTTTGGTGCATGTATTGAAGGGGTT...TTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCCTAAACATGCTAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCAATGGCCAAGATAAGGTaGCTACCACCAAATTACCTT +
Preference number: 4 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQAMAKIR*LPPNYL
Trigger: AAGGTAATTTGGTGGTAGGCACCTTATCTTGGCCAT...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCGTTCGAAGTAATGTTTaGAAGGCACATGCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIVRSNV*KAHAKF
Trigger: AAACTTGGCATGTGCCTTGCAAACATTACTTCGAAC...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CCTTCTCCTGATAGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAGTTCGAAGTAATGTTTaGAAGGCACATGCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: PSPDRFLSLRPHQSQCWSVRSNV*KAHAKF
Trigger: AAACTTGGCATGTGCCTTGCAAACATTACTTCGAAC...TGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCTATCAGGAGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAAGGTGCTTTATGGTCTaGTCAGCAGCTAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQRCFMV*SAAKAS
Trigger: TGAAGCTTTAGCTGCTGAGCAGACCATAAAGCACCT...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAAGGTGCTTTATGGTCTaGTCAGCAGCTAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSRCFMV*SAAKAS
Trigger: TGAAGCTTTAGCTGCTGAGCAGACCATAAAGCACCT...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTAGGTGCTTTATGGTCTaGTCAGCAGCTAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGRCFMV*SAAKAS
Trigger: TGAAGCTTTAGCTGCTGAGCAGACCATAAAGCACCT...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTCTGCCTCCATTAGGTaGTTTATGGTCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSSASIR*FMVCSA
Trigger: TGCTGAGCAGACCATAAAGCACCTAATGGAGGCAGA...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACATCTGCCTCCATTAGGTaGTTTATGGTCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTSASIR*FMVCSA
Trigger: TGCTGAGCAGACCATAAAGCACCTAATGGAGGCAGA...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTTCTGCCTCCATTAGGTaGTTTATGGTCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASSASIR*FMVCSA
Trigger: TGCTGAGCAGACCATAAAGCACCTAATGGAGGCAGA...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGCCGTGTTGTGCTTCATaGCCCCAAGGCCACATGACT +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRPCCAS*PQGHMT
Trigger: AGTCATGTGGCCTTGGGGGCATGAAGCACAACACGG...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAATCACCACCGTGTTGTaGTTCATGCCCCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTITTVL*FMPPRP
Trigger: TGGCCTTGGGGGCATGAAGCACAACACGGTGGTGAT...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGTTTAGCCACCAGCAGTaGAAGATGGGCAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: FSVMTADQMGALLHRYLRFSHQQ*KMGSSC
Trigger: ACAACTGCTGCCCATCTTGCACTGCTGGTGGCTAAA...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR GCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAATTTCGCCACACCTTGTaGTGTTTCAGTAGGAATGGT +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQFRHTL*CFSRNG
Trigger: ACCATTCCTACTGAAACAGCACAAGGTGTGGCGAAA...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCATTTCGCCACACCTTGTaGTGTTTCAGTAGGAATGGT +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSFRHTL*CFSRNG
Trigger: ACCATTCCTACTGAAACAGCACAAGGTGTGGCGAAA...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCAGATATATCACTGTCATaGATCTCCACCACTTCTACC +
Preference number: 4 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQADISLS*ISTTST
Trigger: GGTAGAAGTGGTGGAGATGCATGACAGTGATATATC...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR GCA 90 bp GGCTTGGCTAATCTCGTAGTTCAGGGCCAAGTTTCTGTAGTCAGAATGAAGAATGTCTTTCACCAATTGTaGCTCTCTGTCTCGCTCTGT +
Preference number: 4 (lower is better)
Translates to: GLANLVVQGQVSVVRMKNVFHQL*LSVSLC
Trigger: ACAGAGCGAGACAGAGAGGCACAATTGGTGAAAGAC...ATTCTTCATTCTGACTACAGAAACTTGGCCCTGAACTACGAGATTAGCCAAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR GCA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTCTTTCACCAATTGTaGCTCTCTGTCTCGCTCTGT +
Preference number: 4 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDVFHQL*LSVSLC
Trigger: ACAGAGCGAGACAGAGAGGCACAATTGGTGAAAGAC...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGGTCTTTCACCAATTGTaGCTCTCTGTCTCGCTCTGT +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVVFHQL*LSVSLC
Trigger: ACAGAGCGAGACAGAGAGGCACAATTGGTGAAAGAC...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTGTCTTTCACCAATTGTaGCTCTCTGTCTCGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASVFHQL*LSVSLC
Trigger: ACAGAGCGAGACAGAGAGGCACAATTGGTGAAAGAC...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTCCTCATCAGAGCCAATaGTGGTCAATCGTAGCATTG +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASPHQSQ*WSIVAL
Trigger: CAATGCTACGATTGACCAGCATTGGCTCTGATGAGG...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATAGTTTCACTGCTGTATaGATCCGCCTCACATTGGAC +
Preference number: 4 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDSFTAV*IRLTLD
Trigger: GTCCAATGTGAGGCGGATGCATACAGCAGTGAAACT...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCGTTGAGTTTCACTaGTGTATGCATCCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: FSVMTADQMGALLHRYLRLVEFH*CMHPPH
Trigger: GTGAGGCGGATGCATACAGCAGTGAAACTCAACGAG...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGCTCGTTGAGTTTCACTaGTGTATGCATCCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVELVEFH*CMHPPH
Trigger: GTGAGGCGGATGCATACAGCAGTGAAACTCAACGAG...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGTCTGGTGGGAAAGGTaGACATGCATAACGGGAAAA +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVVWWER*TCITGK
Trigger: TTTTCCCGTTATGCATGTGCACCTTTCCCACCAGAC...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAAAGACACCTTCGGTCTaGTGTCCATTTCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTKTPSV*CPFLPQ
Trigger: TTGAGGAAGAAATGGACACCAGACCGAAGGTGTCTT...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTAAGACACCTTCGGTCTaGTGTCCATTTCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: PMLVNRSIEFRSFTNCASKTPSV*CPFLPQ
Trigger: TTGAGGAAGAAATGGACACCAGACCGAAGGTGTCTT...AGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTTTGTCCAAGTCATGTGCACCTTCTCCTGATAGGTTTCTGTCTCTTCGTCCTCAAGACACCTTCGGTCTaGTGTCCATTTCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: FCPSHVHLLLIGFCLFVLKTPSV*CPFLPQ
Trigger: TTGAGGAAGAAATGGACACCAGACCGAAGGTGTCTT...GAGGACGAAGAGACAGAAACCTATCAGGAGAAGGTGCACATGACTTGGACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AAAAGACTTAAGATCCTATCCGCTTTGCCATCCTCAGTGGGCCTGGAGGTTGAATGGCTGCTGCAAATGTaGTACCAAGATAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: KRLKILSALPSSVGLEVEWLLQM*YQDKSR
Trigger: TCTGCTTTTATCTTGGTACCACATTTGCAGCAGCCA...TTCAACCTCCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTTAAGTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGCATCACTGTGAAAGATaGCAGCTCGGGGGACGATAT +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVEHHCER*QLGGRY
Trigger: ATATCGTCCCCCGAGCTGCCATCTTTCACAGTGATG...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAATCCAGGAATGCCCTaGATTGAAGTGACGTTATTG +
Preference number: 4 (lower is better)
Translates to: TADQMGALLHRYLRLSSSNPGMP*IEVTLL
Trigger: CAATAACGTCACTTCAATCCAGGGCATTCCTGGATT...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCAATCCAGGAATGCCCTaGATTGAAGTGACGTTATTG +
Preference number: 4 (lower is better)
Translates to: EPMLVNRSIEFRSFTNCANPGMP*IEVTLL
Trigger: CAATAACGTCACTTCAATCCAGGGCATTCCTGGATT...GGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTCCATTGGCTTTGCTGTaGCCAAAAACCCTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVPLALL*PKTLRN
Trigger: GTTTCTGAGGGTTTTTGGCCACAGCAAAGCCAATGG...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCCATTGGCTTTGCTGTaGCCAAAAACCCTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEAPLALL*PKTLRN
Trigger: GTTTCTGAGGGTTTTTGGCCACAGCAAAGCCAATGG...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGCCATTGGCTTTGCTGTaGCCAAAAACCCTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVPLALL*PKTLRN
Trigger: GTTTCTGAGGGTTTTTGGCCACAGCAAAGCCAATGG...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGTTCCAAGCTCTGCAATaGCAGCAGTTAGAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSEFQALQ*QQLEVK
Trigger: CTTTACTTCTAACTGCTGCCATTGCAGAGCTTGGAA...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAATCGGGGTCTCCAGTTaGGTGTTCGAAGTAATGTTT +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTIGVSS*VFEVMF
Trigger: AAACATTACTTCGAACACCCAACTGGAGACCCCGAT...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTCTGTCTCATCGGGGTCTCCAGTTaGGTGTTCGAAGTAATGTTT +
Preference number: 4 (lower is better)
Translates to: WSIVALSFGLSPIVPLCLIGVSS*VFEVMF
Trigger: AAACATTACTTCGAACACCCAACTGGAGACCCCGAT...GAGACAGAGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTTTACCATGGCTACAATaGCATAATACCAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGLPWLQ*HNTRKK
Trigger: TTTCTTCCTGGTATTATGCCATTGTAGCCATGGTAA...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGTCAATGCCAATCTGTATGCCATTTTAGTAAAGTAGGTAAGGAGAGTAGCCGCCCAGTTTTTAGTGTGTaGAGGTCCTTCCTCCAATCG +
Preference number: 4 (lower is better)
Translates to: GQCQSVCHFSKVGKESSRPVFSV*RSFLQS
Trigger: CGATTGGAGGAAGGACCTCCACACACTAAAAACTGG...GCGGCTACTCTCCTTACCTACTTTACTAAAATGGCATACAGATTGGCATTGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGCCAGTTTTTAGTGTGTaGAGGTCCTTCCTCCAATCG +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVPVFSV*RSFLQS
Trigger: CGATTGGAGGAAGGACCTCCACACACTAAAAACTGG...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGATGCCATGTACTTGTCTTTTCCAGTTTTTAGTGTGTaGAGGTCCTTCCTCCAATCG +
Preference number: 4 (lower is better)
Translates to: NPSIDFAFCPRDAMYLSFPVFSV*RSFLQS
Trigger: CGATTGGAGGAAGGACCTCCACACACTAAAAACTGG...AAAAGACAAGTACATGGCATCCCGGGGACAAAAAGCGAAGTCAATGGAAGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAACCATTAGGTGCTTTATaGTCTGCTCAGCAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQPLGAL*SAQQLK
Trigger: CTTTAGCTGCTGAGCAGACCATAAAGCACCTAATGG...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGCTGTTGTCTTCTAATTaGGCTACTGTGAAGATCCGT +
Preference number: 4 (lower is better)
Translates to: RFLSLRPHQSQCWSIVALLLSSN*ATVKIR
Trigger: ACGGATCTTCACAGTAGCCCAATTAGAAGACAACAG...CAATGCTACGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AAAAGACTTAAGATCCTATCCGCTTTGCCATCCTCAGTGGGCCTGGAGGTTGAACTGTTGTCTTCTAATTaGGCTACTGTGAAGATCCGT +
Preference number: 4 (lower is better)
Translates to: KRLKILSALPSSVGLEVELLSSN*ATVKIR
Trigger: ACGGATCTTCACAGTAGCCCAATTAGAAGACAACAG...TTCAACCTCCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTTAAGTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACATGTGCCGGAGCATCTaGGACCTTTGTTCCATCATC +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYMCRSI*DLCSII
Trigger: GATGATGGAACAAAGGTCCCAGATGCTCCGGCACAT...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGATGTGCCGGAGCATCTaGGACCTTTGTTCCATCATC +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVEMCRSI*DLCSII
Trigger: GATGATGGAACAAAGGTCCCAGATGCTCCGGCACAT...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCATCAGAGCCAATGCTaGTCAATCGTAGCATTGAGT +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGHQSQC*SIVALS
Trigger: ACTCAATGCTACGATTGACCAGCATTGGCTCTGATG...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGCATCAGAGCCAATGCTaGTCAATCGTAGCATTGAGT +
Preference number: 4 (lower is better)
Translates to: PLTAQTWLERLEHCSDVEHQSQC*SIVALS
Trigger: ACTCAATGCTACGATTGACCAGCATTGGCTCTGATG...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CAGAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCATCAGAGCCAATGCTaGTCAATCGTAGCATTGAGT +
Preference number: 4 (lower is better)
Translates to: QSQCWSIVALSFGLSPIVHQSQC*SIVALS
Trigger: ACTCAATGCTACGATTGACCAGCATTGGCTCTGATG...CACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTATGTTAAGCAGGTCCTaGAATCCTTCCATTGACTTC +
Preference number: 4 (lower is better)
Translates to: SGRMLSRSWNPSIDFAFCMLSRS*NPSIDF
Trigger: GAAGTCAATGGAAGGATTCCAGGACCTGCTTAACAT...ACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAATGTTAAGCAGGTCCTaGAATCCTTCCATTGACTTC +
Preference number: 4 (lower is better)
Translates to: TADQMGALLHRYLRLSSSMLSRS*NPSIDF
Trigger: GAAGTCAATGGAAGGATTCCAGGACCTGCTTAACAT...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTCATAGGTAAGACTCAAAAGCGGGATCTTATTCAAAAGGCAGGTATTTCCTTTAGCCTTCCGTGTTGCTaGGATCACAGGCATGCACCA +
Preference number: 4 (lower is better)
Translates to: VIGKTQKRDLIQKAGISFSLPCC*DHRHAP
Trigger: TGGTGCATGCCTGTGATCCCAGCAACACGGAAGGCT...AAAGGAAATACCTGCCTTTTGAATAAGATCCCGCTTTTGAGTCTTACCTATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGAACTCAACTAAGCAATaGAGTGTTGCAGTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSENSTKQ*SVAVGV
Trigger: AACTCCCACTGCAACACTCCATTGCTTAGTTGAGTT...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACCTGAAGCCATCTTGGTaGTGGTTTCTGGAGGATGCA +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYLKPSW*WFLEDA
Trigger: TGCATCCTCCAGAAACCACCACCAAGATGGCTTCAG...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558667.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CTCCAACCACAAACAGCACTTCTAAAACTAACTTTACTTTCTGCCCATAATTTGCAGTTGCCAGCGAAGTaGTGGCCCCAGACATCTCAC +
Preference number: 4 (lower is better)
Translates to: LQPQTALLKLTLLSAHNLQLPAK*WPQTSH
Trigger: GTGAGATGTCTGGGGCCACCACTTCGCTGGCAACTG...CAAATTATGGGCAGAAAGTAAAGTTAGTTTTAGAAGTGCTGTTTGTGGTTGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGAGTCCGGTCACTGGGTaGATCCAGTGCAACAGTTGC +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRSPVTG*IQCNSC
Trigger: GCAACTGTTGCACTGGATCCACCCAGTGACCGGACT...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACACAGGCGACTATAGCGTaGATCAGATTGCTAAAAGGT +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTQATIA*IRLLKG
Trigger: ACCTTTTAGCAATCTGATCCACGCTATAGTCGCCTG...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
3UTR CAA 72 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTaGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTG +
Preference number: 4 (lower is better)
Translates to: TADQMGALLHRY*RLSSSRVQYDV
Trigger: CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR CAA 72 bp AGTAAAGTAGGTAAGGAGAGTAGCCGCTCAGTAACGTaGGCACTAAAGAAAGAGTGTGGCTCTAGAACTTCC +
Preference number: 4 (lower is better)
Translates to: SKVGKESSRSVT*ALKKECGSRTS
Trigger: GGAAGTTCTAGAGCCACACTCTTTCTTTAGTGCCAACGTTACTGAGCGGCTACTCTCCTTACCTACTTTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACGAGCAAAAGAAGACTTaGTGGCTCCAGCATAGATGG +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYEQKKT*WLQHRW
Trigger: CCATCTATGCTGGAGCCATCAAGTCTTCTTTTGCTC...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGGAGCAAAAGAAGACTTaGTGGCTCCAGCATAGATGG +
Preference number: 4 (lower is better)
Translates to: FSVMTADQMGALLHRYLREQKKT*WLQHRW
Trigger: CCATCTATGCTGGAGCCATCAAGTCTTCTTTTGCTC...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGGAGCAAAAGAAGACTTaGTGGCTCCAGCATAGATGG +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVEEQKKT*WLQHRW
Trigger: CCATCTATGCTGGAGCCATCAAGTCTTCTTTTGCTC...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGGAGCAAAAGAAGACTTaGTGGCTCCAGCATAGATGG +
Preference number: 4 (lower is better)
Translates to: AFSVMTADQMGALLHRYLEQKKT*WLQHRW
Trigger: CCATCTATGCTGGAGCCATCAAGTCTTCTTTTGCTC...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCATCACAGGTGGCATTaGAAAATTGACTCGAGTTAC +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGHHRWH*KIDSSY
Trigger: GTAACTCGAGTCAATTTTTCAATGCCACCTGTGATG...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCACATCACAGGTGGCATTaGAAAATTGACTCGAGTTAC +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSHHRWH*KIDSSY
Trigger: GTAACTCGAGTCAATTTTTCAATGCCACCTGTGATG...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGAAGTGACGTTATTGTaGACAAAGTATTCATCACAG +
Preference number: 4 (lower is better)
Translates to: VGSLGHRNLRQRKIYRVIEVTLL*TKYSSQ
Trigger: CTGTGATGAATACTTTGTTCACAATAACGTCACTTC...GATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCAGAAGTGACGTTATTGTaGACAAAGTATTCATCACAG +
Preference number: 4 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSEVTLL*TKYSSQ
Trigger: CTGTGATGAATACTTTGTTCACAATAACGTCACTTC...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCGAAGTGACGTTATTGTaGACAAAGTATTCATCACAG +
Preference number: 4 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIEVTLL*TKYSSQ
Trigger: CTGTGATGAATACTTTGTTCACAATAACGTCACTTC...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCATGCCCTGGATTGAAGTaGCGTTATTGTGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSCPGLK*RYCEQS
Trigger: ACTTTGTTCACAATAACGTCACTTCAATCCAGGGCA...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGGAATGCCCTGGATTaGAGTGACGTTATTGTGAAC +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASRNALD*SDVIVN
Trigger: GTTCACAATAACGTCACTTCAATCCAGGGCATTCCT...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATAGGAATGCCCTGGATTaGAGTGACGTTATTGTGAAC +
Preference number: 4 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYRNALD*SDVIVN
Trigger: GTTCACAATAACGTCACTTCAATCCAGGGCATTCCT...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTAGGAATGCCCTGGATTaGAGTGACGTTATTGTGAAC +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVRNALD*SDVIVN
Trigger: GTTCACAATAACGTCACTTCAATCCAGGGCATTCCT...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTAGGAATGCCCTGGATTaGAGTGACGTTATTGTGAAC +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVRNALD*SDVIVN
Trigger: GTTCACAATAACGTCACTTCAATCCAGGGCATTCCT...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGATCTCCAGATCTGTTTaGTCCAGCCATGATACCTGT +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVISRSV*SSHDTC
Trigger: ACAGGTATCATGGCTGGATCAAACAGATCTGGAGAT...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTATCTCCAGATCTGTTTaGTCCAGCCATGATACCTGT +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASISRSV*SSHDTC
Trigger: ACAGGTATCATGGCTGGATCAAACAGATCTGGAGAT...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGTGTGGCTCTAGAACTTCCAATTCCATTGCTAGATGTGCCCTTTAAAAGATGGCACCGAACTTGTCTCTaGGAACAACCCCTTCAATAC +
Preference number: 4 (lower is better)
Translates to: SVALELPIPLLDVPFKRWHRTCL*EQPLQY
Trigger: GTATTGAAGGGGTTGTTCTCAGAGACAAGTTCGGTG...CCATCTTTTAAAGGGCACATCTAGCAATGGAATTGGAAGTTCTAGAGCCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGCACCGAACTTGTCTCTaGGAACAACCCCTTCAATAC +
Preference number: 4 (lower is better)
Translates to: AFSVMTADQMGALLHRYLHRTCL*EQPLQY
Trigger: GTATTGAAGGGGTTGTTCTCAGAGACAAGTTCGGTG...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTTTGTCCAAGTCATGTGCACCTTCTCCTGATAGGTTTCTGTCTCTTCGTCCTCAGTAATACAAGCAACTaGGGCCTCCAGTTTTTAGTG +
Preference number: 4 (lower is better)
Translates to: FCPSHVHLLLIGFCLFVLSNTSN*GLQFLV
Trigger: CACTAAAAACTGGAGGCCTCAGTTGCTTGTATTACT...GAGGACGAAGAGACAGAAACCTATCAGGAGAAGGTGCACATGACTTGGACAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCACTCGTAAGTATATGCTaGTATATCACTGTCATGCAT +
Preference number: 4 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSLVSIC*YITVMH
Trigger: ATGCATGACAGTGATATATCAGCATATACTTACGAG...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR TCA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGGTTATGAATAAATGGTaGTCACTTCACTGCCACCAC +
Preference number: 4 (lower is better)
Translates to: PLTAQTWLERLEHCSDVEVMNKW*SLHCHH
Trigger: GTGGTGGCAGTGAAGTGATCACCATTTATTCATAAC...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGTTATGAATAAATGGTaGTCACTTCACTGCCACCAC +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQVMNKW*SLHCHH
Trigger: GTGGTGGCAGTGAAGTGATCACCATTTATTCATAAC...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGACACAGGCTTCTAGTTaGGTGGGAGTGGTAGTAATG +
Preference number: 4 (lower is better)
Translates to: AFSVMTADQMGALLHRYLTQASS*VGVVVM
Trigger: CATTACTACCACTCCCACTCAACTAGAAGCCTGTGT...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTATCAAGAGTTCAGTATaGTGTGTACAGAACACAGGC +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGIKSSV*CVQNTG
Trigger: GCCTGTGTTCTGTACACATCATACTGAACTCTTGAT...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTCTGTCTATCAAGAGTTCAGTATaGTGTGTACAGAACACAGGC +
Preference number: 4 (lower is better)
Translates to: LVNRSIEFRSFTNCASLSIKSSV*CVQNTG
Trigger: GCCTGTGTTCTGTACACATCATACTGAACTCTTGAT...AGACAGAGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTCTGTCTCATCAAGAGTTCAGTATaGTGTGTACAGAACACAGGC +
Preference number: 4 (lower is better)
Translates to: WSIVALSFGLSPIVPLCLIKSSV*CVQNTG
Trigger: GCCTGTGTTCTGTACACATCATACTGAACTCTTGAT...GAGACAGAGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGCTTGGCTAATCTCGTAGTTCAGGGCCAAGTTTCTGTAGTCAGAATGAAGAATTTTTACACAGGTACTTaGGGCTCAGCTCATCAAGAG +
Preference number: 4 (lower is better)
Translates to: GLANLVVQGQVSVVRMKNFYTGT*GSAHQE
Trigger: CTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAA...ATTCTTCATTCTGACTACAGAAACTTGGCCCTGAACTACGAGATTAGCCAAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTTTTTACACAGGTACTTaGGGCTCAGCTCATCAAGAG +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASFYTGT*GSAHQE
Trigger: CTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAA...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTTTTACACAGGTACTTaGGGCTCAGCTCATCAAGAG +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVFYTGT*GSAHQE
Trigger: CTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAA...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATTTTTACACAGGTACTTaGGGCTCAGCTCATCAAGAG +
Preference number: 4 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYFYTGT*GSAHQE
Trigger: CTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAA...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATTTTTACACAGGTACTTaGGGCTCAGCTCATCAAGAG +
Preference number: 4 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDFYTGT*GSAHQE
Trigger: CTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAA...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTATTCTAATTTGCCTTTaGCTGCTCAGACGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVILICL*LLRRGL
Trigger: CAAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAAT...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATATTCTAATTTGCCTTTaGCTGCTCAGACGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYILICL*LLRRGL
Trigger: CAAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAAT...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGTGTGGCTCTAGAACTTCCAATTCCATTGCTAGATGTGCCCTTTAAAAGATGGGGGAGAAGAACCTGTTaGTTAATGTGCACCATGACC +
Preference number: 4 (lower is better)
Translates to: SVALELPIPLLDVPFKRWGRRTC*LMCTMT
Trigger: GGTCATGGTGCACATTAATCAACAGGTTCTTCTCCC...CCATCTTTTAAAGGGCACATCTAGCAATGGAATTGGAAGTTCTAGAGCCACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCCTATGGCTTTGTAGATaGGGCAAAAGATTTCTTAGT +
Preference number: 4 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLILWLCR*GKRFLS
Trigger: ACTAAGAAATCTTTTGCCTCATCTACAAAGCCATAG...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp AAAAGACTTAAGATCCTATCCGCTTTGCCATCCTCAGTGGGCCTGGAGGTTGAACAAATGAATAATTTGTaGCACCTAGGTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: KRLKILSALPSSVGLEVEQMNNL*HLGQLA
Trigger: AGCAAGCTGACCTAGGTGTCACAAATTATTCATTTG...TTCAACCTCCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTTAAGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACGGATCCTGCAGGACATaGCTCACTACTGTTAAACTC +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYGSCRT*LTTVKL
Trigger: GAGTTTAACAGTAGTGAGTCATGTCCTGCAGGATCC...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp AGTGTGGCTCTAGAACTTCCAATTCCATTGCTAGATGTGCCCTTTAAAAGATGGAGTTCGAGACCAGCCTaGCCAACATCAGTTTCAGTA +
Preference number: 4 (lower is better)
Translates to: SVALELPIPLLDVPFKRWSSRPA*PTSVSV
Trigger: TACTGAAACTGATGTTGGTCAGGCTGGTCTCGAACT...CCATCTTTTAAAGGGCACATCTAGCAATGGAATTGGAAGTTCTAGAGCCACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp GTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCTTTTGTGTTTCGGGCTaGAGCAGTGGTTATATTAAA +
Preference number: 4 (lower is better)
Translates to: VGSLGHRNLRQRKIYRVIFCVSG*SSGYIK
Trigger: TTTAATATAACCACTGCTTCAGCCCGAAACACAAAA...GATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGGTCCGGACTGGTGTCTaGCAAACCTGGAATGTCATC +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRVRTGV*QTWNVI
Trigger: GATGACATTCCAGGTTTGTCAGACACCAGTCCGGAC...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATGTCCGGACTGGTGTCTaGCAAACCTTGCGAAGAGAA +
Preference number: 4 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHVRTGV*QTLRRE
Trigger: TTCTCTTCGCAAGGTTTGTCAGACACCAGTCCGGAC...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397702.6
CDS-3UTR TCA 90 bp GTCATAGGTAAGACTCAAAAGCGGGATCTTATTCAAAAGGCAGGTATTTCCTTTCTGTTGTGTATCAGGTaGATACCCCACAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: VIGKTQKRDLIQKAGISFLLCIR*IPHRSG
Trigger: GCCAGACCTGTGGGGTATTCACCTGATACACAACAG...AAAGGAAATACCTGCCTTTTGAATAAGATCCCGCTTTTGAGTCTTACCTATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676379.1
CDS-3UTR GCA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCCTCTTCATGTTCCTTTaGTCCTTGAGTCAGATTAGT +
Preference number: 4 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFLFMFL*SLSQIS
Trigger: ACTAATCTGACTCAAGGAGCAAAGGAACATGAAGAG...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGATGTACATGGCTGCTaGAAATGTGGTACCAAGATA +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTDVHGC*KCGTKI
Trigger: TATCTTGGTACCACATTTGCAGCAGCCATGTACATC...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTGATGTACATGGCTGCTaGAAATGTGGTACCAAGATA +
Preference number: 4 (lower is better)
Translates to: PMLVNRSIEFRSFTNCASDVHGC*KCGTKI
Trigger: TATCTTGGTACCACATTTGCAGCAGCCATGTACATC...AGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGGATGTACATGGCTGCTaGAAATGTGGTACCAAGATA +
Preference number: 4 (lower is better)
Translates to: PLTAQTWLERLEHCSDVEDVHGC*KCGTKI
Trigger: TATCTTGGTACCACATTTGCAGCAGCCATGTACATC...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTATGGCCAAGATAAGGTaGCTACCACCAAATTACCTT +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGMAKIR*LPPNYL
Trigger: AAGGTAATTTGGTGGTAGGCACCTTATCTTGGCCAT...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAATGGCCAAGATAAGGTaGCTACCACCAAATTACCTT +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTMAKIR*LPPNYL
Trigger: AAGGTAATTTGGTGGTAGGCACCTTATCTTGGCCAT...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGATGGCCAAGATAAGGTaGCTACCACCAAATTACCTT +
Preference number: 4 (lower is better)
Translates to: PLTAQTWLERLEHCSDVEMAKIR*LPPNYL
Trigger: AAGGTAATTTGGTGGTAGGCACCTTATCTTGGCCAT...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCAGTTCGAAGTAATGTTTaGAAGGCACATGCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQAVRSNV*KAHAKF
Trigger: AAACTTGGCATGTGCCTTGCAAACATTACTTCGAAC...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATAGGTGCTTTATGGTCTaGTCAGCAGCTAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYRCFMV*SAAKAS
Trigger: TGAAGCTTTAGCTGCTGAGCAGACCATAAAGCACCT...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp AATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGATGCCATGTACTTGTCTTTTAGGTGCTTTATGGTCTaGTCAGCAGCTAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: NPSIDFAFCPRDAMYLSFRCFMV*SAAKAS
Trigger: TGAAGCTTTAGCTGCTGAGCAGACCATAAAGCACCT...AAAAGACAAGTACATGGCATCCCGGGGACAAAAAGCGAAGTCAATGGAAGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACAAGGTGCTTTATGGTCTaGTCAGCAGCTAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTRCFMV*SAAKAS
Trigger: TGAAGCTTTAGCTGCTGAGCAGACCATAAAGCACCT...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCAAAAATTGCTCCACATTaGTGGGAAAGAAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQAKIAPH*WERRRC
Trigger: ACATCTCCTTCTTTCCCAGCAATGTGGAGCAATTTT...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR GCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTTTTCGCCACACCTTGTaGTGTTTCAGTAGGAATGGT +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVFRHTL*CFSRNG
Trigger: ACCATTCCTACTGAAACAGCACAAGGTGTGGCGAAA...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATTTTCGCCACACCTTGTaGTGTTTCAGTAGGAATGGT +
Preference number: 4 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYFRHTL*CFSRNG
Trigger: ACCATTCCTACTGAAACAGCACAAGGTGTGGCGAAA...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTTTTCGCCACACCTTGTaGTGTTTCAGTAGGAATGGT +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVFRHTL*CFSRNG
Trigger: ACCATTCCTACTGAAACAGCACAAGGTGTGGCGAAA...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTTTTCGCCACACCTTGTaGTGTTTCAGTAGGAATGGT +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASFRHTL*CFSRNG
Trigger: ACCATTCCTACTGAAACAGCACAAGGTGTGGCGAAA...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACCTACCTCCGCCTCAATaGGTAAGTGATATAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYLPPPQ*VSDIGR
Trigger: CCTTCCTATATCACTTACGCATTGAGGCGGAGGTAG...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGCTACCTCCGCCTCAATaGGTAAGTGATATAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVELPPPQ*VSDIGR
Trigger: CCTTCCTATATCACTTACGCATTGAGGCGGAGGTAG...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGATATATCACTGTCATaGATCTCCACCACTTCTACC +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQDISLS*ISTTST
Trigger: GGTAGAAGTGGTGGAGATGCATGACAGTGATATATC...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR GCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGATATATCACTGTCATaGATCTCCACCACTTCTACC +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSDISLS*ISTTST
Trigger: GGTAGAAGTGGTGGAGATGCATGACAGTGATATATC...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR GCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGTTCCATCATCAAAGTaGGCTCGTAAGTATATGCTG +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQVPSSK*ARKYML
Trigger: CAGCATATACTTACGAGCGCACTTTGATGATGGAAC...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGGTTCCATCATCAAAGTaGGCTCGTAAGTATATGCTG +
Preference number: 4 (lower is better)
Translates to: PLTAQTWLERLEHCSDVEVPSSK*ARKYML
Trigger: CAGCATATACTTACGAGCGCACTTTGATGATGGAAC...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACGTCTTTCACCAATTGTaGCTCTCTGTCTCGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYVFHQL*LSVSLC
Trigger: ACAGAGCGAGACAGAGAGGCACAATTGGTGAAAGAC...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGAGTTTCACTGCTGTATaGATCCGCCTCACATTGGAC +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVESFTAV*IRLTLD
Trigger: GTCCAATGTGAGGCGGATGCATACAGCAGTGAAACT...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ACCAGTTTTCCATGTAACAGTGATTTTGTGTTTCGGGCTGAAGCAGTGGTTATACTCGTTGAGTTTCACTaGTGTATGCATCCGCCTCAC +
Preference number: 4 (lower is better)
Translates to: TSFPCNSDFVFRAEAVVILVEFH*CMHPPH
Trigger: GTGAGGCGGATGCATACAGCAGTGAAACTCAACGAG...TATAACCACTGCTTCAGCCCGAAACACAAAATCACTGTTACATGGAAAACTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp GTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCTCTTCAACAGGTCAATaGCAATCTGTATGCCATTTT +
Preference number: 4 (lower is better)
Translates to: VGSLGHRNLRQRKIYRVISSTGQ*QSVCHF
Trigger: AAAATGGCATACAGATTGGCATTGACCTGTTGAAGA...GATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR GCA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATACTGGGTGGATCCAGTaGAACAGTTGCCAGCGAAGT +
Preference number: 4 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHTGWIQ*NSCQRS
Trigger: ACTTCGCTGGCAACTGTTGCACTGGATCCACCCAGT...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCCCTAGAAGGACAATGTaGATATTACGACAAACACAA +
Preference number: 4 (lower is better)
Translates to: VGSLGHRNLRQRKIYRVIPRRTM*ILRQTQ
Trigger: TTGTGTTTGTCGTAATATGCACATTGTCCTTCTAGG...GATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354181.8
CDS-3UTR GCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTTGGGAAAGGTGCACATaGATAACGGGAAAAATAACC +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGWERCT*ITGKIT
Trigger: GGTTATTTTTCCCGTTATGCATGTGCACCTTTCCCA...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACGTCTGGTGGGAAAGGTaGACATGCATAACGGGAAAA +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYVWWER*TCITGK
Trigger: TTTTCCCGTTATGCATGTGCACCTTTCCCACCAGAC...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTCATAGGTAAGACTCAAAAGCGGGATCTTATTCAAAAGGCAGGTATTTCCTTTGTTGGGCGAAGTGCGTaGAGGCAAACCTTTATCAGG +
Preference number: 4 (lower is better)
Translates to: VIGKTQKRDLIQKAGISFVGRSA*RQTFIR
Trigger: CCTGATAAAGGTTTGCCTGCACGCACTTCGCCCAAC...AAAGGAAATACCTGCCTTTTGAATAAGATCCCGCTTTTGAGTCTTACCTATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676379.1
CDS-3UTR CCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACAAAGACACCTTCGGTCTaGTGTCCATTTCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTKTPSV*CPFLPQ
Trigger: TTGAGGAAGAAATGGACACCAGACCGAAGGTGTCTT...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAAGACACCTTCGGTCTaGTGTCCATTTCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASKTPSV*CPFLPQ
Trigger: TTGAGGAAGAAATGGACACCAGACCGAAGGTGTCTT...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGATGAAGGTACCCATTTaGGGGGTCTTGGTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRMKVPI*GVLVGF
Trigger: GAAGCCCACCAAGACCCCCCAAATGGGTACCTTCAT...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTCATAGGTAAGACTCAAAAGCGGGATCTTATTCAAAAGGCAGGTATTTCCTTTATGAAGGTACCCATTTaGGGGGTCTTGGTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: VIGKTQKRDLIQKAGISFMKVPI*GVLVGF
Trigger: GAAGCCCACCAAGACCCCCCAAATGGGTACCTTCAT...AAAGGAAATACCTGCCTTTTGAATAAGATCCCGCTTTTGAGTCTTACCTATGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACATGGCTGCTGCAAATGTaGTACCAAGATAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTWLLQM*YQDKSR
Trigger: TCTGCTTTTATCTTGGTACCACATTTGCAGCAGCCA...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAATGGCTGCTGCAAATGTaGTACCAAGATAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQWLLQM*YQDKSR
Trigger: TCTGCTTTTATCTTGGTACCACATTTGCAGCAGCCA...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTTTGTCCAAGTCATGTGCACCTTCTCCTGATAGGTTTCTGTCTCTTCGTCCTCTGGCTGCTGCAAATGTaGTACCAAGATAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: FCPSHVHLLLIGFCLFVLWLLQM*YQDKSR
Trigger: TCTGCTTTTATCTTGGTACCACATTTGCAGCAGCCA...GAGGACGAAGAGACAGAAACCTATCAGGAGAAGGTGCACATGACTTGGACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAAATCCAGGAATGCCCTaGATTGAAGTGACGTTATTG +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSNPGMP*IEVTLL
Trigger: CAATAACGTCACTTCAATCCAGGGCATTCCTGGATT...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAAATCCAGGAATGCCCTaGATTGAAGTGACGTTATTG +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQNPGMP*IEVTLL
Trigger: CAATAACGTCACTTCAATCCAGGGCATTCCTGGATT...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGAATCCAGGAATGCCCTaGATTGAAGTGACGTTATTG +
Preference number: 4 (lower is better)
Translates to: PLTAQTWLERLEHCSDVENPGMP*IEVTLL
Trigger: CAATAACGTCACTTCAATCCAGGGCATTCCTGGATT...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTGTTAGCATGTTTAGGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAAACAAGAACATATTCATaGTTTAAGCTGCCTAAGACA +
Preference number: 4 (lower is better)
Translates to: LLACLGGTRIGGILGPQETRTYS*FKLPKT
Trigger: TGTCTTAGGCAGCTTAAACCATGAATATGTTCTTGT...TTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCCTAAACATGCTAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCCATTGGCTTTGCTGTaGCCAAAAACCCTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: FSVMTADQMGALLHRYLRPLALL*PKTLRN
Trigger: GTTTCTGAGGGTTTTTGGCCACAGCAAAGCCAATGG...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAATTCCAAGCTCTGCAATaGCAGCAGTTAGAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQFQALQ*QQLEVK
Trigger: CTTTACTTCTAACTGCTGCCATTGCAGAGCTTGGAA...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTTTCCAAGCTCTGCAATaGCAGCAGTTAGAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: PMLVNRSIEFRSFTNCASFQALQ*QQLEVK
Trigger: CTTTACTTCTAACTGCTGCCATTGCAGAGCTTGGAA...AGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGCTTGGCTAATCTCGTAGTTCAGGGCCAAGTTTCTGTAGTCAGAATGAAGAATAAACATGGAAAGAATTaGGGCCACAAGATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GLANLVVQGQVSVVRMKNKHGKN*GHKIQG
Trigger: TCCCTGGATCTTGTGGCCCCAATTCTTTCCATGTTT...ATTCTTCATTCTGACTACAGAAACTTGGCCCTGAACTACGAGATTAGCCAAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTAAACATGGAAAGAATTaGGGCCACAAGATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVKHGKN*GHKIQG
Trigger: TCCCTGGATCTTGTGGCCCCAATTCTTTCCATGTTT...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATAAACATGGAAAGAATTaGGGCCACAAGATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDKHGKN*GHKIQG
Trigger: TCCCTGGATCTTGTGGCCCCAATTCTTTCCATGTTT...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGATGCCATGTACTTGTCTTTTAAACATGGAAAGAATTaGGGCCACAAGATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: NPSIDFAFCPRDAMYLSFKHGKN*GHKIQG
Trigger: TCCCTGGATCTTGTGGCCCCAATTCTTTCCATGTTT...AAAAGACAAGTACATGGCATCCCGGGGACAAAAAGCGAAGTCAATGGAAGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGAAACATGGAAAGAATTaGGGCCACAAGATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVKHGKN*GHKIQG
Trigger: TCCCTGGATCTTGTGGCCCCAATTCTTTCCATGTTT...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGAAACATGGAAAGAATTaGGGCCACAAGATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVKHGKN*GHKIQG
Trigger: TCCCTGGATCTTGTGGCCCCAATTCTTTCCATGTTT...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTATCGGGGTCTCCAGTTaGGTGTTCGAAGTAATGTTT +
Preference number: 4 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSIGVSS*VFEVMF
Trigger: AAACATTACTTCGAACACCCAACTGGAGACCCCGAT...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCTTACCATGGCTACAATaGCATAATACCAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLILPWLQ*HNTRKK
Trigger: TTTCTTCCTGGTATTATGCCATTGTAGCCATGGTAA...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCTTACCATGGCTACAATaGCATAATACCAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: VGSLGHRNLRQRKIYRVILPWLQ*HNTRKK
Trigger: TTTCTTCCTGGTATTATGCCATTGTAGCCATGGTAA...GATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGCCAGTTTTTAGTGTGTaGAGGTCCTTCCTCCAATCG +
Preference number: 4 (lower is better)
Translates to: AFSVMTADQMGALLHRYLPVFSV*RSFLQS
Trigger: CGATTGGAGGAAGGACCTCCACACACTAAAAACTGG...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACCCAGTTTTTAGTGTGTaGAGGTCCTTCCTCCAATCG +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYPVFSV*RSFLQS
Trigger: CGATTGGAGGAAGGACCTCCACACACTAAAAACTGG...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGCCATTAGGTGCTTTATaGTCTGCTCAGCAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVPLGAL*SAQQLK
Trigger: CTTTAGCTGCTGAGCAGACCATAAAGCACCTAATGG...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTCCATTAGGTGCTTTATaGTCTGCTCAGCAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVPLGAL*SAQQLK
Trigger: CTTTAGCTGCTGAGCAGACCATAAAGCACCTAATGG...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAACTGTTGTCTTCTAATTaGGCTACTGTGAAGATCCGT +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQLLSSN*ATVKIR
Trigger: ACGGATCTTCACAGTAGCCCAATTAGAAGACAACAG...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCACTGTTGTCTTCTAATTaGGCTACTGTGAAGATCCGT +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSLLSSN*ATVKIR
Trigger: ACGGATCTTCACAGTAGCCCAATTAGAAGACAACAG...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CAGAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCTGTTGTCTTCTAATTaGGCTACTGTGAAGATCCGT +
Preference number: 4 (lower is better)
Translates to: QSQCWSIVALSFGLSPIVLLSSN*ATVKIR
Trigger: ACGGATCTTCACAGTAGCCCAATTAGAAGACAACAG...CACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCTGTTGTCTTCTAATTaGGCTACTGTGAAGATCCGT +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGLLSSN*ATVKIR
Trigger: ACGGATCTTCACAGTAGCCCAATTAGAAGACAACAG...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTGTCTCGCTCTGTTTTaGATAGCCGCATGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRCLALF*IAACAG
Trigger: TCCGGCACATGCGGCTATCCAAAACAGAGCGAGACA...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTCATCAGAGCCAATGCTaGTCAATCGTAGCATTGAGT +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVHQSQC*SIVALS
Trigger: ACTCAATGCTACGATTGACCAGCATTGGCTCTGATG...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATCATCAGAGCCAATGCTaGTCAATCGTAGCATTGAGT +
Preference number: 4 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDHQSQC*SIVALS
Trigger: ACTCAATGCTACGATTGACCAGCATTGGCTCTGATG...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAATGTTAAGCAGGTCCTaGAATCCTTCCATTGACTTC +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQMLSRS*NPSIDF
Trigger: GAAGTCAATGGAAGGATTCCAGGACCTGCTTAACAT...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTATGTTAAGCAGGTCCTaGAATCCTTCCATTGACTTC +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGMLSRS*NPSIDF
Trigger: GAAGTCAATGGAAGGATTCCAGGACCTGCTTAACAT...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCAACCAGCTTTGCTTCATaGGACTTGTTAACTATAACC +
Preference number: 4 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQATSFAS*DLLTIT
Trigger: GGTTATAGTTAACAAGTCCCATGAAGCAAAGCTGGT...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAACCAGCTTTGCTTCATaGGACTTGTTAACTATAACC +
Preference number: 4 (lower is better)
Translates to: TADQMGALLHRYLRLSSSTSFAS*DLLTIT
Trigger: GGTTATAGTTAACAAGTCCCATGAAGCAAAGCTGGT...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGTCAATGCCAATCTGTATGCCATTTTAGTAAAGTAGGTAAGGAGAGTAGCCGCGTGCCCTTTAAAAGATaGTCCAGTGCTTTCAGGGAA +
Preference number: 4 (lower is better)
Translates to: GQCQSVCHFSKVGKESSRVPFKR*SSAFRE
Trigger: TTCCCTGAAAGCACTGGACCATCTTTTAAAGGGCAC...GCGGCTACTCTCCTTACCTACTTTACTAAAATGGCATACAGATTGGCATTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp TTGTTAGCATGTTTAGGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAAACACAAGTATTTCCTTaGCACACTGAACTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LLACLGGTRIGGILGPQETQVFP*HTELSF
Trigger: AAAAGAAAGTTCAGTGTGCCAAGGAAATACTTGTGT...TTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCCTAAACATGCTAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGGAACTGAAGCCATCTTaGTGGTGGTTTCTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: AFSVMTADQMGALLHRYLELKPS*WWFLED
Trigger: ATCCTCCAGAAACCACCACCAAGATGGCTTCAGTTC...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGCCTGTGATGGAGTTCTaGCTCAGGTCTGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRPVMEF*LRSGSS
Trigger: AGATGAACCAGACCTGAGTCAGAACTCCATCACAGG...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000290209.9
CDS-3UTR TCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGACAATTGCAAAAGCCTaGAGAACTCCAGCTGTGCCC +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRTIAKA*RTPAVP
Trigger: GGGCACAGCTGGAGTTCTTCAGGCTTTTGCAATTGT...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATCCAAGATGGACACAATaGCACAGGCCAGGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHPRWTQ*HRPGKV
Trigger: CACTTTTCCTGGCCTGTGTCATTGTGTCCATCTTGG...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGCCAAGATGGACACAATaGCACAGGCCAGGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRPRWTQ*HRPGKV
Trigger: CACTTTTCCTGGCCTGTGTCATTGTGTCCATCTTGG...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACCAAGATGGACACAATaGCACAGGCCAGGAAAAGTG +
Preference number: 4 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTPRWTQ*HRPGKV
Trigger: CACTTTTCCTGGCCTGTGTCATTGTGTCCATCTTGG...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGCATCACAGGTGGCATTaGAAAATTGACTCGAGTTAC +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVHHRWH*KIDSSY
Trigger: GTAACTCGAGTCAATTTTTCAATGCCACCTGTGATG...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGATGCCATGTACTTGTCTTTTCATCACAGGTGGCATTaGAAAATTGACTCGAGTTAC +
Preference number: 4 (lower is better)
Translates to: NPSIDFAFCPRDAMYLSFHHRWH*KIDSSY
Trigger: GTAACTCGAGTCAATTTTTCAATGCCACCTGTGATG...AAAAGACAAGTACATGGCATCCCGGGGACAAAAAGCGAAGTCAATGGAAGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAGAAGTGACGTTATTGTaGACAAAGTATTCATCACAG +
Preference number: 4 (lower is better)
Translates to: TADQMGALLHRYLRLSSSEVTLL*TKYSSQ
Trigger: CTGTGATGAATACTTTGTTCACAATAACGTCACTTC...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGCTGAAGGCTTTTCGATaGTCTCTCCCTTGGGTAGGT +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRLKAFR*SLPWVG
Trigger: ACCTACCCAAGGGAGAGATCATCGAAAAGCCTTCAG...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGATCTCCAGATCTGTTTaGTCCAGCCATGATACCTGT +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVEISRSV*SSHDTC
Trigger: ACAGGTATCATGGCTGGATCAAACAGATCTGGAGAT...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ACCAGTTTTCCATGTAACAGTGATTTTGTGTTTCGGGCTGAAGCAGTGGTTATACACCGAACTTGTCTCTaGGAACAACCCCTTCAATAC +
Preference number: 4 (lower is better)
Translates to: TSFPCNSDFVFRAEAVVIHRTCL*EQPLQY
Trigger: GTATTGAAGGGGTTGTTCTCAGAGACAAGTTCGGTG...TATAACCACTGCTTCAGCCCGAAACACAAAATCACTGTTACATGGAAAACTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTAGTAATACAAGCAACTaGGGCCTCCAGTTTTTAGTG +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVSNTSN*GLQFLV
Trigger: CACTAAAAACTGGAGGCCTCAGTTGCTTGTATTACT...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTAGTAATACAAGCAACTaGGGCCTCCAGTTTTTAGTG +
Preference number: 4 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSSNTSN*GLQFLV
Trigger: CACTAAAAACTGGAGGCCTCAGTTGCTTGTATTACT...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATGCCTCAATGCGTAAGTaGTATAGGAAGGTGGCTAGG +
Preference number: 4 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHASMRK*YRKVAR
Trigger: CCTAGCCACCTTCCTATATCACTTACGCATTGAGGC...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCACTCGTAAGTATATGCTaGTATATCACTGTCATGCAT +
Preference number: 4 (lower is better)
Translates to: TADQMGALLHRYLRLSSSLVSIC*YITVMH
Trigger: ATGCATGACAGTGATATATCAGCATATACTTACGAG...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR TCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGCTGGAATCCTTCCATTaGCTTCGCTTTTTGTCCCCG +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRLESFH*LRFLSP
Trigger: CGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAG...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGTTATGAATAAATGGTaGTCACTTCACTGCCACCAC +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVVMNKW*SLHCHH
Trigger: GTGGTGGCAGTGAAGTGATCACCATTTATTCATAAC...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTATCAAGAGTTCAGTATaGTGTGTACAGAACACAGGC +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVIKSSV*CVQNTG
Trigger: GCCTGTGTTCTGTACACATCATACTGAACTCTTGAT...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTATCAAGAGTTCAGTATaGTGTGTACAGAACACAGGC +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASIKSSV*CVQNTG
Trigger: GCCTGTGTTCTGTACACATCATACTGAACTCTTGAT...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTATCAAGAGTTCAGTATaGTGTGTACAGAACACAGGC +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVIKSSV*CVQNTG
Trigger: GCCTGTGTTCTGTACACATCATACTGAACTCTTGAT...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGTGTGGCTCTAGAACTTCCAATTCCATTGCTAGATGTGCCCTTTAAAAGATGGATTCTAATTTGCCTTTaGCTGCTCAGACGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: SVALELPIPLLDVPFKRWILICL*LLRRGL
Trigger: CAAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAAT...CCATCTTTTAAAGGGCACATCTAGCAATGGAATTGGAAGTTCTAGAGCCACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGATTCTAATTTGCCTTTaGCTGCTCAGACGTGGCTTG +
Preference number: 4 (lower is better)
Translates to: FSVMTADQMGALLHRYLRILICL*LLRRGL
Trigger: CAAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAAT...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGTTGAACCATGACTTCTaGGATTCATCTTTAATGCTG +
Preference number: 4 (lower is better)
Translates to: RFLSLRPHQSQCWSIVALLNHDF*DSSLML
Trigger: CAGCATTAAAGATGAATCTCAGAAGTCATGGTTCAA...CAATGCTACGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCATTGAACCATGACTTCTaGGATTCATCTTTAATGCTG +
Preference number: 4 (lower is better)
Translates to: TADQMGALLHRYLRLSSSLNHDF*DSSLML
Trigger: CAGCATTAAAGATGAATCTCAGAAGTCATGGTTCAA...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCACTATGGCTTTGTAGATaGGGCAAAAGATTTCTTAGT +
Preference number: 4 (lower is better)
Translates to: TADQMGALLHRYLRLSSSLWLCR*GKRFLS
Trigger: ACTAAGAAATCTTTTGCCTCATCTACAAAGCCATAG...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAAAGATTTCACATACTTaGAATTACTGCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSKISHT*NYCSAS
Trigger: GCTGGCTGAGCAGTAATTTCAAGTATGTGAAATCTT...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACACAAATGAATAATTTGTaGCACCTAGGTCAGCTTGCT +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTQMNNL*HLGQLA
Trigger: AGCAAGCTGACCTAGGTGTCACAAATTATTCATTTG...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGTACGCTAGCTACTTTTaGACTACTGAGAGAAGGGTG +
Preference number: 4 (lower is better)
Translates to: FSVMTADQMGALLHRYLRYASYF*TTERRV
Trigger: CACCCTTCTCTCAGTAGTTCAAAAGTAGCTAGCGTA...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000354181.8
CDS-3UTR TCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAAATAACCCACACTACTaGGAGAAGGGTGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTNNPHY*EKGEQR
Trigger: CCTCTGCTCACCCTTCTCTCAGTAGTGTGGGTTATT...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTCTGTCTCAATGCCAATCTTGTGTaGCTTCTTTCCTTCAGAATG +
Preference number: 4 (lower is better)
Translates to: WSIVALSFGLSPIVPLCLNANLV*LLSFRM
Trigger: CATTCTGAAGGAAAGAAGTCACACAAGATTGGCATT...GAGACAGAGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGTTCAGTGATGTTTTCTaGCTCTTCATGTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: PLTAQTWLERLEHCSDVEFSDVF*LFMFLC
Trigger: GCAAAGGAACATGAAGAGGCAGAAAACATCACTGAA...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTTTCAGTGATGTTTTCTaGCTCTTCATGTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGFSDVF*LFMFLC
Trigger: GCAAAGGAACATGAAGAGGCAGAAAACATCACTGAA...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTGATGTACATGGCTGCTaGAAATGTGGTACCAAGATA +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASDVHGC*KCGTKI
Trigger: TATCTTGGTACCACATTTGCAGCAGCCATGTACATC...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTGATGTACATGGCTGCTaGAAATGTGGTACCAAGATA +
Preference number: 4 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEADVHGC*KCGTKI
Trigger: TATCTTGGTACCACATTTGCAGCAGCCATGTACATC...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACAGATGTACATGGCTGCTaGAAATGTGGTACCAAGATA +
Preference number: 4 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTDVHGC*KCGTKI
Trigger: TATCTTGGTACCACATTTGCAGCAGCCATGTACATC...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ACCAGTTTTCCATGTAACAGTGATTTTGTGTTTCGGGCTGAAGCAGTGGTTATAGGACCAAGAAAGCTGTaGCGTAGACACGCATGTTAT +
Preference number: 4 (lower is better)
Translates to: TSFPCNSDFVFRAEAVVIGPRKL*RRHACY
Trigger: ATAACATGCGTGTCTACGGCACAGCTTTCTTGGTCC...TATAACCACTGCTTCAGCCCGAAACACAAAATCACTGTTACATGGAAAACTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATGTCTTGATGAAAGGGTaGGGTTACCCAGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHVLMKG*GYPACR
Trigger: TCTGCATGCTGGGTAACCGCACCCTTTCATCAAGAC...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAGTCTTGATGAAAGGGTaGGGTTACCCAGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTVLMKG*GYPACR
Trigger: TCTGCATGCTGGGTAACCGCACCCTTTCATCAAGAC...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGGTCTTGATGAAAGGGTaGGGTTACCCAGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRVLMKG*GYPACR
Trigger: TCTGCATGCTGGGTAACCGCACCCTTTCATCAAGAC...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTAACCCCTTCAATACATaGACCAAAAAGGACAACATT +
Preference number: 4 (lower is better)
Translates to: SGRMLSRSWNPSIDFAFCNPFNT*TKKDNI
Trigger: AATGTTGTCCTTTTTGGTGCATGTATTGAAGGGGTT...ACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTATGGCCAAGATAAGGTaGCTACCACCAAATTACCTT +
Preference number: 4 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSMAKIR*LPPNYL
Trigger: AAGGTAATTTGGTGGTAGGCACCTTATCTTGGCCAT...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAGTTCCCCATTGGCTTTaGTGTGGCCAAAAACCCTCA +
Preference number: 4 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTVPHWL*CGQKPS
Trigger: TGAGGGTTTTTGGCCACAGCAAAGCCAATGGGGAAC...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTCATAGGTAAGACTCAAAAGCGGGATCTTATTCAAAAGGCAGGTATTTCCTTTGTTCCCCATTGGCTTTaGTGTGGCCAAAAACCCTCA +
Preference number: 4 (lower is better)
Translates to: VIGKTQKRDLIQKAGISFVPHWL*CGQKPS
Trigger: TGAGGGTTTTTGGCCACAGCAAAGCCAATGGGGAAC...AAAGGAAATACCTGCCTTTTGAATAAGATCCCGCTTTTGAGTCTTACCTATGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGTTCGAAGTAATGTTTaGAAGGCACATGCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSVRSNV*KAHAKF
Trigger: AAACTTGGCATGTGCCTTGCAAACATTACTTCGAAC...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGTTCGAAGTAATGTTTaGAAGGCACATGCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTVRSNV*KAHAKF
Trigger: AAACTTGGCATGTGCCTTGCAAACATTACTTCGAAC...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGGTTCGAAGTAATGTTTaGAAGGCACATGCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: PLTAQTWLERLEHCSDVEVRSNV*KAHAKF
Trigger: AAACTTGGCATGTGCCTTGCAAACATTACTTCGAAC...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGGTGCTTTATGGTCTaGTCAGCAGCTAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYRCFMV*SAAKAS
Trigger: TGAAGCTTTAGCTGCTGAGCAGACCATAAAGCACCT...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ACCAGTTTTCCATGTAACAGTGATTTTGTGTTTCGGGCTGAAGCAGTGGTTATATCTGCCTCCATTAGGTaGTTTATGGTCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: TSFPCNSDFVFRAEAVVISASIR*FMVCSA
Trigger: TGCTGAGCAGACCATAAAGCACCTAATGGAGGCAGA...TATAACCACTGCTTCAGCCCGAAACACAAAATCACTGTTACATGGAAAACTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATTTTAGCCACCAGCAGTaGAAGATGGGCAGCAGTTGT +
Preference number: 4 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHFSHQQ*KMGSSC
Trigger: ACAACTGCTGCCCATCTTGCACTGCTGGTGGCTAAA...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR GCA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGAAAATTGCTCCACATTaGTGGGAAAGAAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: PLTAQTWLERLEHCSDVEKIAPH*WERRRC
Trigger: ACATCTCCTTCTTTCCCAGCAATGTGGAGCAATTTT...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR GCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTAAAATTGCTCCACATTaGTGGGAAAGAAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGKIAPH*WERRRC
Trigger: ACATCTCCTTCTTTCCCAGCAATGTGGAGCAATTTT...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR GCA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGTTTCGCCACACCTTGTaGTGTTTCAGTAGGAATGGT +
Preference number: 4 (lower is better)
Translates to: FSVMTADQMGALLHRYLRFRHTL*CFSRNG
Trigger: ACCATTCCTACTGAAACAGCACAAGGTGTGGCGAAA...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGATATATCACTGTCATaGATCTCCACCACTTCTACC +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVDISLS*ISTTST
Trigger: GGTAGAAGTGGTGGAGATGCATGACAGTGATATATC...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR GCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACAGATATATCACTGTCATaGATCTCCACCACTTCTACC +
Preference number: 4 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTDISLS*ISTTST
Trigger: GGTAGAAGTGGTGGAGATGCATGACAGTGATATATC...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR GCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGTTCCATCATCAAAGTaGGCTCGTAAGTATATGCTG +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVVPSSK*ARKYML
Trigger: CAGCATATACTTACGAGCGCACTTTGATGATGGAAC...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGGTTCCATCATCAAAGTaGGCTCGTAAGTATATGCTG +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVVPSSK*ARKYML
Trigger: CAGCATATACTTACGAGCGCACTTTGATGATGGAAC...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTGTTCCATCATCAAAGTaGGCTCGTAAGTATATGCTG +
Preference number: 4 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEAVPSSK*ARKYML
Trigger: CAGCATATACTTACGAGCGCACTTTGATGATGGAAC...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACAGTTCCATCATCAAAGTaGGCTCGTAAGTATATGCTG +
Preference number: 4 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTVPSSK*ARKYML
Trigger: CAGCATATACTTACGAGCGCACTTTGATGATGGAAC...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCAGAAAAAGGGGGAAATaGTTATACTTGGCATTAAGT +
Preference number: 4 (lower is better)
Translates to: VGSLGHRNLRQRKIYRVIRKRGK*LYLALS
Trigger: ACTTAATGCCAAGTATAAGCATTTCCCCCTTTTTCT...GATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR GCA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGACACCTAGGTCAGCTTaGTCCATGTCCTATTTAGTA +
Preference number: 4 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVTPRSA*SMSYLV
Trigger: TACTAAATAGGACATGGAGCAAGCTGACCTAGGTGT...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTTGGGAAAGGTGCACATaGATAACGGGAAAAATAACC +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVWERCT*ITGKIT
Trigger: GGTTATTTTTCCCGTTATGCATGTGCACCTTTCCCA...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGTGGTTTCTGGAGGATaGATTTTGTTCTTGCGAAGA +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVVVSGG*ILFLRR
Trigger: TCTTCGCAAGAACAAAATGCATCCTCCAGAAACCAC...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558667.5
CDS-3UTR CCA 90 bp CTCCAACCACAAACAGCACTTCTAAAACTAACTTTACTTTCTGCCCATAATTTGATGAAGGTACCCATTTaGGGGGTCTTGGTGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LQPQTALLKLTLLSAHNLMKVPI*GVLVGF
Trigger: GAAGCCCACCAAGACCCCCCAAATGGGTACCTTCAT...CAAATTATGGGCAGAAAGTAAAGTTAGTTTTAGAAGTGCTGTTTGTGGTTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTTGGCTGCTGCAAATGTaGTACCAAGATAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVWLLQM*YQDKSR
Trigger: TCTGCTTTTATCTTGGTACCACATTTGCAGCAGCCA...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTTGGCTGCTGCAAATGTaGTACCAAGATAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVWLLQM*YQDKSR
Trigger: TCTGCTTTTATCTTGGTACCACATTTGCAGCAGCCA...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTGGCTGCTGCAAATGTaGTACCAAGATAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVWLLQM*YQDKSR
Trigger: TCTGCTTTTATCTTGGTACCACATTTGCAGCAGCCA...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATAATCCAGGAATGCCCTaGATTGAAGTGACGTTATTG +
Preference number: 4 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYNPGMP*IEVTLL
Trigger: CAATAACGTCACTTCAATCCAGGGCATTCCTGGATT...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAATCCAGGAATGCCCTaGATTGAAGTGACGTTATTG +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASNPGMP*IEVTLL
Trigger: CAATAACGTCACTTCAATCCAGGGCATTCCTGGATT...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCACAAGAACATATTCATaGTTTAAGCTGCCTAAGACA +
Preference number: 4 (lower is better)
Translates to: VGSLGHRNLRQRKIYRVITRTYS*FKLPKT
Trigger: TGTCTTAGGCAGCTTAAACCATGAATATGTTCTTGT...GATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCAACAAGAACATATTCATaGTTTAAGCTGCCTAAGACA +
Preference number: 4 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSTRTYS*FKLPKT
Trigger: TGTCTTAGGCAGCTTAAACCATGAATATGTTCTTGT...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CTCCTGATAGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGACAAGAACATATTCATaGTTTAAGCTGCCTAAGACA +
Preference number: 4 (lower is better)
Translates to: LLIGFCLFVLIRANAGQSTRTYS*FKLPKT
Trigger: TGTCTTAGGCAGCTTAAACCATGAATATGTTCTTGT...CGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCTATCAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTTTCCAAGCTCTGCAATaGCAGCAGTTAGAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVFQALQ*QQLEVK
Trigger: CTTTACTTCTAACTGCTGCCATTGCAGAGCTTGGAA...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTTCCAAGCTCTGCAATaGCAGCAGTTAGAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVFQALQ*QQLEVK
Trigger: CTTTACTTCTAACTGCTGCCATTGCAGAGCTTGGAA...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATTTCCAAGCTCTGCAATaGCAGCAGTTAGAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYFQALQ*QQLEVK
Trigger: CTTTACTTCTAACTGCTGCCATTGCAGAGCTTGGAA...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGTTCCAAGCTCTGCAATaGCAGCAGTTAGAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVFQALQ*QQLEVK
Trigger: CTTTACTTCTAACTGCTGCCATTGCAGAGCTTGGAA...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAAACATGGAAAGAATTaGGGCCACAAGATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYKHGKN*GHKIQG
Trigger: TCCCTGGATCTTGTGGCCCCAATTCTTTCCATGTTT...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAAACATGGAAAGAATTaGGGCCACAAGATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: AFSVMTADQMGALLHRYLKHGKN*GHKIQG
Trigger: TCCCTGGATCTTGTGGCCCCAATTCTTTCCATGTTT...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGATCGGGGTCTCCAGTTaGGTGTTCGAAGTAATGTTT +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVEIGVSS*VFEVMF
Trigger: AAACATTACTTCGAACACCCAACTGGAGACCCCGAT...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGTTACCATGGCTACAATaGCATAATACCAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSELPWLQ*HNTRKK
Trigger: TTTCTTCCTGGTATTATGCCATTGTAGCCATGGTAA...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCATTACCATGGCTACAATaGCATAATACCAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQALPWLQ*HNTRKK
Trigger: TTTCTTCCTGGTATTATGCCATTGTAGCCATGGTAA...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTTTACCATGGCTACAATaGCATAATACCAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: SGRMLSRSWNPSIDFAFCLPWLQ*HNTRKK
Trigger: TTTCTTCCTGGTATTATGCCATTGTAGCCATGGTAA...ACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTTACCAGCTATTACCATaGCTACAATGGCATAATACC +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGYQLLP*LQWHNT
Trigger: GGTATTATGCCATTGTAGCCATGGTAATAGCTGGTA...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACATACCAGCTATTACCATaGCTACAATGGCATAATACC +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTYQLLP*LQWHNT
Trigger: GGTATTATGCCATTGTAGCCATGGTAATAGCTGGTA...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGCCATTAGGTGCTTTATaGTCTGCTCAGCAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVEPLGAL*SAQQLK
Trigger: CTTTAGCTGCTGAGCAGACCATAAAGCACCTAATGG...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTCTGTTGTCTTCTAATTaGGCTACTGTGAAGATCCGT +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASLLSSN*ATVKIR
Trigger: ACGGATCTTCACAGTAGCCCAATTAGAAGACAACAG...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAATGTGCCGGAGCATCTaGGACCTTTGTTCCATCATC +
Preference number: 4 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTMCRSI*DLCSII
Trigger: GATGATGGAACAAAGGTCCCAGATGCTCCGGCACAT...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATATGTGCCGGAGCATCTaGGACCTTTGTTCCATCATC +
Preference number: 4 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHMCRSI*DLCSII
Trigger: GATGATGGAACAAAGGTCCCAGATGCTCCGGCACAT...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CTCCAACCACAAACAGCACTTCTAAAACTAACTTTACTTTCTGCCCATAATTTGTGTCTCGCTCTGTTTTaGATAGCCGCATGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: LQPQTALLKLTLLSAHNLCLALF*IAACAG
Trigger: TCCGGCACATGCGGCTATCCAAAACAGAGCGAGACA...CAAATTATGGGCAGAAAGTAAAGTTAGTTTTAGAAGTGCTGTTTGTGGTTGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGATGTTAAGCAGGTCCTaGAATCCTTCCATTGACTTC +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVMLSRS*NPSIDF
Trigger: GAAGTCAATGGAAGGATTCCAGGACCTGCTTAACAT...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTATGTTAAGCAGGTCCTaGAATCCTTCCATTGACTTC +
Preference number: 4 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEAMLSRS*NPSIDF
Trigger: GAAGTCAATGGAAGGATTCCAGGACCTGCTTAACAT...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTATGTTAAGCAGGTCCTaGAATCCTTCCATTGACTTC +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVMLSRS*NPSIDF
Trigger: GAAGTCAATGGAAGGATTCCAGGACCTGCTTAACAT...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTCTGTCTACCAGCTTTGCTTCATaGGACTTGTTAACTATAACC +
Preference number: 4 (lower is better)
Translates to: LVNRSIEFRSFTNCASLSTSFAS*DLLTIT
Trigger: GGTTATAGTTAACAAGTCCCATGAAGCAAAGCTGGT...AGACAGAGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGAGTAAAATGTTTGCATCTTaGCTTGCCGAGGATAATAGG +
Preference number: 4 (lower is better)
Translates to: FLSLRPHQSQCWSIVALSKMFAS*LAEDNR
Trigger: CCTATTATCCTCGGCAAGCCAAGATGCAAACATTTT...ACTCAATGCTACGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGAACTCAACTAAGCAATaGAGTGTTGCAGTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVNSTKQ*SVAVGV
Trigger: AACTCCCACTGCAACACTCCATTGCTTAGTTGAGTT...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATCTGAAGCCATCTTGGTaGTGGTTTCTGGAGGATGCA +
Preference number: 4 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHLKPSW*WFLEDA
Trigger: TGCATCCTCCAGAAACCACCACCAAGATGGCTTCAG...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTAGGTATTACATTTCCTaGAGTGATCACAGGGACCAT +
Preference number: 4 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEARYYIS*SDHRDH
Trigger: ATGGTCCCTGTGATCACTCCAGGAAATGTAATACCT...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560164.5
CDS-3UTR TCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAGAGCAAAAGAAGACTTaGTGGCTCCAGCATAGATGG +
Preference number: 4 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTEQKKT*WLQHRW
Trigger: CCATCTATGCTGGAGCCATCAAGTCTTCTTTTGCTC...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp AGTGTGGCTCTAGAACTTCCAATTCCATTGCTAGATGTGCCCTTTAAAAGATGGCATCACAGGTGGCATTaGAAAATTGACTCGAGTTAC +
Preference number: 4 (lower is better)
Translates to: SVALELPIPLLDVPFKRWHHRWH*KIDSSY
Trigger: GTAACTCGAGTCAATTTTTCAATGCCACCTGTGATG...CCATCTTTTAAAGGGCACATCTAGCAATGGAATTGGAAGTTCTAGAGCCACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGCATCACAGGTGGCATTaGAAAATTGACTCGAGTTAC +
Preference number: 4 (lower is better)
Translates to: AFSVMTADQMGALLHRYLHHRWH*KIDSSY
Trigger: GTAACTCGAGTCAATTTTTCAATGCCACCTGTGATG...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGTGCCCTGGATTGAAGTaGCGTTATTGTGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: FSVMTADQMGALLHRYLRCPGLK*RYCEQS
Trigger: ACTTTGTTCACAATAACGTCACTTCAATCCAGGGCA...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACTGCCCTGGATTGAAGTaGCGTTATTGTGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYCPGLK*RYCEQS
Trigger: ACTTTGTTCACAATAACGTCACTTCAATCCAGGGCA...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGTGCCCTGGATTGAAGTaGCGTTATTGTGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVECPGLK*RYCEQS
Trigger: ACTTTGTTCACAATAACGTCACTTCAATCCAGGGCA...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGTGCCCTGGATTGAAGTaGCGTTATTGTGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: AFSVMTADQMGALLHRYLCPGLK*RYCEQS
Trigger: ACTTTGTTCACAATAACGTCACTTCAATCCAGGGCA...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ACCAGTTTTCCATGTAACAGTGATTTTGTGTTTCGGGCTGAAGCAGTGGTTATAAGGAATGCCCTGGATTaGAGTGACGTTATTGTGAAC +
Preference number: 4 (lower is better)
Translates to: TSFPCNSDFVFRAEAVVIRNALD*SDVIVN
Trigger: GTTCACAATAACGTCACTTCAATCCAGGGCATTCCT...TATAACCACTGCTTCAGCCCGAAACACAAAATCACTGTTACATGGAAAACTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp ACCAGTTTTCCATGTAACAGTGATTTTGTGTTTCGGGCTGAAGCAGTGGTTATAATCTCCAGATCTGTTTaGTCCAGCCATGATACCTGT +
Preference number: 4 (lower is better)
Translates to: TSFPCNSDFVFRAEAVVIISRSV*SSHDTC
Trigger: ACAGGTATCATGGCTGGATCAAACAGATCTGGAGAT...TATAACCACTGCTTCAGCCCGAAACACAAAATCACTGTTACATGGAAAACTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGAGTAATACAAGCAACTaGGGCCTCCAGTTTTTAGTG +
Preference number: 4 (lower is better)
Translates to: FSVMTADQMGALLHRYLRSNTSN*GLQFLV
Trigger: CACTAAAAACTGGAGGCCTCAGTTGCTTGTATTACT...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCACTCGTAAGTATATGCTaGTATATCACTGTCATGCAT +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSLVSIC*YITVMH
Trigger: ATGCATGACAGTGATATATCAGCATATACTTACGAG...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR TCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACGTTATGAATAAATGGTaGTCACTTCACTGCCACCAC +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYVMNKW*SLHCHH
Trigger: GTGGTGGCAGTGAAGTGATCACCATTTATTCATAAC...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGGTTATGAATAAATGGTaGTCACTTCACTGCCACCAC +
Preference number: 4 (lower is better)
Translates to: AFSVMTADQMGALLHRYLVMNKW*SLHCHH
Trigger: GTGGTGGCAGTGAAGTGATCACCATTTATTCATAAC...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGATCAAGAGTTCAGTATaGTGTGTACAGAACACAGGC +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVEIKSSV*CVQNTG
Trigger: GCCTGTGTTCTGTACACATCATACTGAACTCTTGAT...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTCTTAGTTCGGCCATTTaGAAGGAACCTGAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVLSSAI*KEPERN
Trigger: ATTTCTTTCAGGTTCCTTTCAAATGGCCGAACTAAG...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATCTTAGTTCGGCCATTTaGAAGGAACCTGAAAGAAAT +
Preference number: 4 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYLSSAI*KEPERN
Trigger: ATTTCTTTCAGGTTCCTTTCAAATGGCCGAACTAAG...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGAAGATTTCACATACTTaGAATTACTGCTCAGCCAGC +
Preference number: 4 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVKISHT*NYCSAS
Trigger: GCTGGCTGAGCAGTAATTTCAAGTATGTGAAATCTT...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp GTCATAGGTAAGACTCAAAAGCGGGATCTTATTCAAAAGGCAGGTATTTCCTTTGGATCCTGCAGGACATaGCTCACTACTGTTAAACTC +
Preference number: 4 (lower is better)
Translates to: VIGKTQKRDLIQKAGISFGSCRT*LTTVKL
Trigger: GAGTTTAACAGTAGTGAGTCATGTCCTGCAGGATCC...AAAGGAAATACCTGCCTTTTGAATAAGATCCCGCTTTTGAGTCTTACCTATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCATTTTGTGTTTCGGGCTaGAGCAGTGGTTATATTAAA +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSFCVSG*SSGYIK
Trigger: TTTAATATAACCACTGCTTCAGCCCGAAACACAAAA...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGAATGCCAATCTTGTGTaGCTTCTTTCCTTCAGAATG +
Preference number: 4 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVNANLV*LLSFRM
Trigger: CATTCTGAAGGAAAGAAGTCACACAAGATTGGCATT...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676379.1
CDS-3UTR GCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTCTCTTCATGTTCCTTTaGTCCTTGAGTCAGATTAGT +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVLFMFL*SLSQIS
Trigger: ACTAATCTGACTCAAGGAGCAAAGGAACATGAAGAG...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATTTCAGTGATGTTTTCTaGCTCTTCATGTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDFSDVF*LFMFLC
Trigger: GCAAAGGAACATGAAGAGGCAGAAAACATCACTGAA...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTTTCAGTGATGTTTTCTaGCTCTTCATGTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASFSDVF*LFMFLC
Trigger: GCAAAGGAACATGAAGAGGCAGAAAACATCACTGAA...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTTCAGTGATGTTTTCTaGCTCTTCATGTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVFSDVF*LFMFLC
Trigger: GCAAAGGAACATGAAGAGGCAGAAAACATCACTGAA...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTTTCAGTGATGTTTTCTaGCTCTTCATGTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVFSDVF*LFMFLC
Trigger: GCAAAGGAACATGAAGAGGCAGAAAACATCACTGAA...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp AGTGTGGCTCTAGAACTTCCAATTCCATTGCTAGATGTGCCCTTTAAAAGATGGGATGTACATGGCTGCTaGAAATGTGGTACCAAGATA +
Preference number: 4 (lower is better)
Translates to: SVALELPIPLLDVPFKRWDVHGC*KCGTKI
Trigger: TATCTTGGTACCACATTTGCAGCAGCCATGTACATC...CCATCTTTTAAAGGGCACATCTAGCAATGGAATTGGAAGTTCTAGAGCCACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR GCA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGGATGTACATGGCTGCTaGAAATGTGGTACCAAGATA +
Preference number: 4 (lower is better)
Translates to: FSVMTADQMGALLHRYLRDVHGC*KCGTKI
Trigger: TATCTTGGTACCACATTTGCAGCAGCCATGTACATC...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGGGACCAAGAAAGCTGTaGCGTAGACACGCATGTTAT +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRGPRKL*RRHACY
Trigger: ATAACATGCGTGTCTACGGCACAGCTTTCTTGGTCC...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CTCCAACCACAAACAGCACTTCTAAAACTAACTTTACTTTCTGCCCATAATTTGGTCTTGATGAAAGGGTaGGGTTACCCAGCATGCAGA +
Preference number: 4 (lower is better)
Translates to: LQPQTALLKLTLLSAHNLVLMKG*GYPACR
Trigger: TCTGCATGCTGGGTAACCGCACCCTTTCATCAAGAC...CAAATTATGGGCAGAAAGTAAAGTTAGTTTTAGAAGTGCTGTTTGTGGTTGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTAACCCCTTCAATACATaGACCAAAAAGGACAACATT +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGNPFNT*TKKDNI
Trigger: AATGTTGTCCTTTTTGGTGCATGTATTGAAGGGGTT...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAAACCCCTTCAATACATaGACCAAAAAGGACAACATT +
Preference number: 4 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTNPFNT*TKKDNI
Trigger: AATGTTGTCCTTTTTGGTGCATGTATTGAAGGGGTT...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGAACCCCTTCAATACATaGACCAAAAAGGACAACATT +
Preference number: 4 (lower is better)
Translates to: PLTAQTWLERLEHCSDVENPFNT*TKKDNI
Trigger: AATGTTGTCCTTTTTGGTGCATGTATTGAAGGGGTT...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTGTTCGAAGTAATGTTTaGAAGGCACATGCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEAVRSNV*KAHAKF
Trigger: AAACTTGGCATGTGCCTTGCAAACATTACTTCGAAC...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATTCTGCCTCCATTAGGTaGTTTATGGTCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHSASIR*FMVCSA
Trigger: TGCTGAGCAGACCATAAAGCACCTAATGGAGGCAGA...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GGCTTGGCTAATCTCGTAGTTCAGGGCCAAGTTTCTGTAGTCAGAATGAAGAATAAAATTGCTCCACATTaGTGGGAAAGAAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: GLANLVVQGQVSVVRMKNKIAPH*WERRRC
Trigger: ACATCTCCTTCTTTCCCAGCAATGTGGAGCAATTTT...ATTCTTCATTCTGACTACAGAAACTTGGCCCTGAACTACGAGATTAGCCAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR GCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTAAAATTGCTCCACATTaGTGGGAAAGAAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVKIAPH*WERRRC
Trigger: ACATCTCCTTCTTTCCCAGCAATGTGGAGCAATTTT...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR GCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGAAAATTGCTCCACATTaGTGGGAAAGAAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVKIAPH*WERRRC
Trigger: ACATCTCCTTCTTTCCCAGCAATGTGGAGCAATTTT...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR GCA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATAAAATTGCTCCACATTaGTGGGAAAGAAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDKIAPH*WERRRC
Trigger: ACATCTCCTTCTTTCCCAGCAATGTGGAGCAATTTT...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR GCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGCTACCTCCGCCTCAATaGGTAAGTGATATAGGAAGG +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRLPPPQ*VSDIGR
Trigger: CCTTCCTATATCACTTACGCATTGAGGCGGAGGTAG...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATCTACCTCCGCCTCAATaGGTAAGTGATATAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHLPPPQ*VSDIGR
Trigger: CCTTCCTATATCACTTACGCATTGAGGCGGAGGTAG...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGGATATATCACTGTCATaGATCTCCACCACTTCTACC +
Preference number: 4 (lower is better)
Translates to: AFSVMTADQMGALLHRYLDISLS*ISTTST
Trigger: GGTAGAAGTGGTGGAGATGCATGACAGTGATATATC...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR GCA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGGATATATCACTGTCATaGATCTCCACCACTTCTACC +
Preference number: 4 (lower is better)
Translates to: FSVMTADQMGALLHRYLRDISLS*ISTTST
Trigger: GGTAGAAGTGGTGGAGATGCATGACAGTGATATATC...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR GCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGGTTCCATCATCAAAGTaGGCTCGTAAGTATATGCTG +
Preference number: 4 (lower is better)
Translates to: AFSVMTADQMGALLHRYLVPSSK*ARKYML
Trigger: CAGCATATACTTACGAGCGCACTTTGATGATGGAAC...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTCATAGGTAAGACTCAAAAGCGGGATCTTATTCAAAAGGCAGGTATTTCCTTTGTCTTTCACCAATTGTaGCTCTCTGTCTCGCTCTGT +
Preference number: 4 (lower is better)
Translates to: VIGKTQKRDLIQKAGISFVFHQL*LSVSLC
Trigger: ACAGAGCGAGACAGAGAGGCACAATTGGTGAAAGAC...AAAGGAAATACCTGCCTTTTGAATAAGATCCCGCTTTTGAGTCTTACCTATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp GTCATAGGTAAGACTCAAAAGCGGGATCTTATTCAAAAGGCAGGTATTTCCTTTCCTCATCAGAGCCAATaGTGGTCAATCGTAGCATTG +
Preference number: 4 (lower is better)
Translates to: VIGKTQKRDLIQKAGISFPHQSQ*WSIVAL
Trigger: CAATGCTACGATTGACCAGCATTGGCTCTGATGAGG...AAAGGAAATACCTGCCTTTTGAATAAGATCCCGCTTTTGAGTCTTACCTATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAAGTTTCACTGCTGTATaGATCCGCCTCACATTGGAC +
Preference number: 4 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTSFTAV*IRLTLD
Trigger: GTCCAATGTGAGGCGGATGCATACAGCAGTGAAACT...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGAGTTTCACTGCTGTATaGATCCGCCTCACATTGGAC +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRSFTAV*IRLTLD
Trigger: GTCCAATGTGAGGCGGATGCATACAGCAGTGAAACT...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GTCATAGGTAAGACTCAAAAGCGGGATCTTATTCAAAAGGCAGGTATTTCCTTTAGTTTCACTGCTGTATaGATCCGCCTCACATTGGAC +
Preference number: 4 (lower is better)
Translates to: VIGKTQKRDLIQKAGISFSFTAV*IRLTLD
Trigger: GTCCAATGTGAGGCGGATGCATACAGCAGTGAAACT...AAAGGAAATACCTGCCTTTTGAATAAGATCCCGCTTTTGAGTCTTACCTATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACTGGCTGCTGCAAATGTaGTACCAAGATAAAAGCAGA +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYWLLQM*YQDKSR
Trigger: TCTGCTTTTATCTTGGTACCACATTTGCAGCAGCCA...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAACAAGAACATATTCATaGTTTAAGCTGCCTAAGACA +
Preference number: 4 (lower is better)
Translates to: TADQMGALLHRYLRLSSSTRTYS*FKLPKT
Trigger: TGTCTTAGGCAGCTTAAACCATGAATATGTTCTTGT...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGCCATTGGCTTTGCTGTaGCCAAAAACCCTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRPLALL*PKTLRN
Trigger: GTTTCTGAGGGTTTTTGGCCACAGCAAAGCCAATGG...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACCATTGGCTTTGCTGTaGCCAAAAACCCTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTPLALL*PKTLRN
Trigger: GTTTCTGAGGGTTTTTGGCCACAGCAAAGCCAATGG...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGTTCCAAGCTCTGCAATaGCAGCAGTTAGAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVEFQALQ*QQLEVK
Trigger: CTTTACTTCTAACTGCTGCCATTGCAGAGCTTGGAA...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCATTACCATGGCTACAATaGCATAATACCAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSLPWLQ*HNTRKK
Trigger: TTTCTTCCTGGTATTATGCCATTGTAGCCATGGTAA...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATTACCAGCTATTACCATaGCTACAATGGCATAATACC +
Preference number: 4 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYYQLLP*LQWHNT
Trigger: GGTATTATGCCATTGTAGCCATGGTAATAGCTGGTA...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGTACCAGCTATTACCATaGCTACAATGGCATAATACC +
Preference number: 4 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVYQLLP*LQWHNT
Trigger: GGTATTATGCCATTGTAGCCATGGTAATAGCTGGTA...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACATGTTAAGCAGGTCCTaGAATCCTTCCATTGACTTC +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYMLSRS*NPSIDF
Trigger: GAAGTCAATGGAAGGATTCCAGGACCTGCTTAACAT...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTACCAGCTTTGCTTCATaGGACTTGTTAACTATAACC +
Preference number: 4 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSTSFAS*DLLTIT
Trigger: GGTTATAGTTAACAAGTCCCATGAAGCAAAGCTGGT...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTAAAATGTTTGCATCTTaGCTTGCCGAGGATAATAGG +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVKMFAS*LAEDNR
Trigger: CCTATTATCCTCGGCAAGCCAAGATGCAAACATTTT...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGAACTCAACTAAGCAATaGAGTGTTGCAGTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: FSVMTADQMGALLHRYLRNSTKQ*SVAVGV
Trigger: AACTCCCACTGCAACACTCCATTGCTTAGTTGAGTT...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp TCAAAGTGCGCTCGTAAGTATATGCTGATATATCACTGTCATGCTCTTGTATCTGAACTGAAGCCATCTTaGTGGTGGTTTCTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: SKCARKYMLIYHCHALVSELKPS*WWFLED
Trigger: ATCCTCCAGAAACCACCACCAAGATGGCTTCAGTTC...AGATACAAGAGCATGACAGTGATATATCAGCATATACTTACGAGCGCACTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561080.5
CDS-3UTR TCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGGGTTCATCTGAATCCTaGATCCGGGCTTTTATGTCT +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRGSSES*IRAFMS
Trigger: AGACATAAAAGCCCGGATTCAGGATTCAGATGAACC...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000290209.9
CDS-3UTR TCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGGAAGTGACGTTATTGTaGACAAAGTATTCATCACAG +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVEVTLL*TKYSSQ
Trigger: CTGTGATGAATACTTTGTTCACAATAACGTCACTTC...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACAGAAGTGACGTTATTGTaGACAAAGTATTCATCACAG +
Preference number: 4 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTEVTLL*TKYSSQ
Trigger: CTGTGATGAATACTTTGTTCACAATAACGTCACTTC...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGAGGAATGCCCTGGATTaGAGTGACGTTATTGTGAAC +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRRNALD*SDVIVN
Trigger: GTTCACAATAACGTCACTTCAATCCAGGGCATTCCT...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAATCTCCAGATCTGTTTaGTCCAGCCATGATACCTGT +
Preference number: 4 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTISRSV*SSHDTC
Trigger: ACAGGTATCATGGCTGGATCAAACAGATCTGGAGAT...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGATCTCCAGATCTGTTTaGTCCAGCCATGATACCTGT +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRISRSV*SSHDTC
Trigger: ACAGGTATCATGGCTGGATCAAACAGATCTGGAGAT...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CTCCAACCACAAACAGCACTTCTAAAACTAACTTTACTTTCTGCCCATAATTTGCACCGAACTTGTCTCTaGGAACAACCCCTTCAATAC +
Preference number: 4 (lower is better)
Translates to: LQPQTALLKLTLLSAHNLHRTCL*EQPLQY
Trigger: GTATTGAAGGGGTTGTTCTCAGAGACAAGTTCGGTG...CAAATTATGGGCAGAAAGTAAAGTTAGTTTTAGAAGTGCTGTTTGTGGTTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTCTCGTAAGTATATGCTaGTATATCACTGTCATGCAT +
Preference number: 4 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSLVSIC*YITVMH
Trigger: ATGCATGACAGTGATATATCAGCATATACTTACGAG...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR TCA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGCTCGTAAGTATATGCTaGTATATCACTGTCATGCAT +
Preference number: 4 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVLVSIC*YITVMH
Trigger: ATGCATGACAGTGATATATCAGCATATACTTACGAG...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR TCA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACTCGTAAGTATATGCTaGTATATCACTGTCATGCAT +
Preference number: 4 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTLVSIC*YITVMH
Trigger: ATGCATGACAGTGATATATCAGCATATACTTACGAG...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR TCA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTTTGAACCATGACTTCTaGGATTCATCTTTAATGCTG +
Preference number: 4 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEALNHDF*DSSLML
Trigger: CAGCATTAAAGATGAATCTCAGAAGTCATGGTTCAA...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTTTGAACCATGACTTCTaGGATTCATCTTTAATGCTG +
Preference number: 4 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVLNHDF*DSSLML
Trigger: CAGCATTAAAGATGAATCTCAGAAGTCATGGTTCAA...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTTTGAACCATGACTTCTaGGATTCATCTTTAATGCTG +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVLNHDF*DSSLML
Trigger: CAGCATTAAAGATGAATCTCAGAAGTCATGGTTCAA...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATTTTTGTGTTTCGGGCTaGAGCAGTGGTTATATTAAA +
Preference number: 4 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDFCVSG*SSGYIK
Trigger: TTTAATATAACCACTGCTTCAGCCCGAAACACAAAA...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR TCA 90 bp CTCCAACCACAAACAGCACTTCTAAAACTAACTTTACTTTCTGCCCATAATTTGAAGATAGATAGCTATTaGAGGCAGAGGGTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LQPQTALLKLTLLSAHNLKIDSY*RQRVSR
Trigger: CCTGCTGACCCTCTGCCTTCAATAGCTATCTATCTT...CAAATTATGGGCAGAAAGTAAAGTTAGTTTTAGAAGTGCTGTTTGTGGTTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp AGTGTGGCTCTAGAACTTCCAATTCCATTGCTAGATGTGCCCTTTAAAAGATGGCTCTTCATGTTCCTTTaGTCCTTGAGTCAGATTAGT +
Preference number: 4 (lower is better)
Translates to: SVALELPIPLLDVPFKRWLFMFL*SLSQIS
Trigger: ACTAATCTGACTCAAGGAGCAAAGGAACATGAAGAG...CCATCTTTTAAAGGGCACATCTAGCAATGGAATTGGAAGTTCTAGAGCCACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR GCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACTTCAGTGATGTTTTCTaGCTCTTCATGTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYFSDVF*LFMFLC
Trigger: GCAAAGGAACATGAAGAGGCAGAAAACATCACTGAA...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTAACCCCTTCAATACATaGACCAAAAAGGACAACATT +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVNPFNT*TKKDNI
Trigger: AATGTTGTCCTTTTTGGTGCATGTATTGAAGGGGTT...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATAACCCCTTCAATACATaGACCAAAAAGGACAACATT +
Preference number: 4 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYNPFNT*TKKDNI
Trigger: AATGTTGTCCTTTTTGGTGCATGTATTGAAGGGGTT...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTAACCCCTTCAATACATaGACCAAAAAGGACAACATT +
Preference number: 4 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSNPFNT*TKKDNI
Trigger: AATGTTGTCCTTTTTGGTGCATGTATTGAAGGGGTT...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp AGTGTGGCTCTAGAACTTCCAATTCCATTGCTAGATGTGCCCTTTAAAAGATGGGTTCGAAGTAATGTTTaGAAGGCACATGCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: SVALELPIPLLDVPFKRWVRSNV*KAHAKF
Trigger: AAACTTGGCATGTGCCTTGCAAACATTACTTCGAAC...CCATCTTTTAAAGGGCACATCTAGCAATGGAATTGGAAGTTCTAGAGCCACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR GCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGAGGTGCTTTATGGTCTaGTCAGCAGCTAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRRCFMV*SAAKAS
Trigger: TGAAGCTTTAGCTGCTGAGCAGACCATAAAGCACCT...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAAGGTGCTTTATGGTCTaGTCAGCAGCTAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTRCFMV*SAAKAS
Trigger: TGAAGCTTTAGCTGCTGAGCAGACCATAAAGCACCT...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CTCCAACCACAAACAGCACTTCTAAAACTAACTTTACTTTCTGCCCATAATTTGGTCTTTCACCAATTGTaGCTCTCTGTCTCGCTCTGT +
Preference number: 4 (lower is better)
Translates to: LQPQTALLKLTLLSAHNLVFHQL*LSVSLC
Trigger: ACAGAGCGAGACAGAGAGGCACAATTGGTGAAAGAC...CAAATTATGGGCAGAAAGTAAAGTTAGTTTTAGAAGTGCTGTTTGTGGTTGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTTCTTCAACAGGTCAATaGCAATCTGTATGCCATTTT +
Preference number: 4 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEASSTGQ*QSVCHF
Trigger: AAAATGGCATACAGATTGGCATTGACCTGTTGAAGA...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR GCA 90 bp ACCAGTTTTCCATGTAACAGTGATTTTGTGTTTCGGGCTGAAGCAGTGGTTATATGGGAAAGGTGCACATaGATAACGGGAAAAATAACC +
Preference number: 4 (lower is better)
Translates to: TSFPCNSDFVFRAEAVVIWERCT*ITGKIT
Trigger: GGTTATTTTTCCCGTTATGCATGTGCACCTTTCCCA...TATAACCACTGCTTCAGCCCGAAACACAAAATCACTGTTACATGGAAAACTGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676379.1
CDS-3UTR CCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGAAGACACCTTCGGTCTaGTGTCCATTTCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRKTPSV*CPFLPQ
Trigger: TTGAGGAAGAAATGGACACCAGACCGAAGGTGTCTT...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTCATAGGTAAGACTCAAAAGCGGGATCTTATTCAAAAGGCAGGTATTTCCTTTAAGACACCTTCGGTCTaGTGTCCATTTCTTCCTCAA +
Preference number: 4 (lower is better)
Translates to: VIGKTQKRDLIQKAGISFKTPSV*CPFLPQ
Trigger: TTGAGGAAGAAATGGACACCAGACCGAAGGTGTCTT...AAAGGAAATACCTGCCTTTTGAATAAGATCCCGCTTTTGAGTCTTACCTATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAACAAGAACATATTCATaGTTTAAGCTGCCTAAGACA +
Preference number: 4 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSTRTYS*FKLPKT
Trigger: TGTCTTAGGCAGCTTAAACCATGAATATGTTCTTGT...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTACAAGAACATATTCATaGTTTAAGCTGCCTAAGACA +
Preference number: 4 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGTRTYS*FKLPKT
Trigger: TGTCTTAGGCAGCTTAAACCATGAATATGTTCTTGT...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTACAAGAACATATTCATaGTTTAAGCTGCCTAAGACA +
Preference number: 4 (lower is better)
Translates to: PMLVNRSIEFRSFTNCASTRTYS*FKLPKT
Trigger: TGTCTTAGGCAGCTTAAACCATGAATATGTTCTTGT...AGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAACAAGAACATATTCATaGTTTAAGCTGCCTAAGACA +
Preference number: 4 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQTRTYS*FKLPKT
Trigger: TGTCTTAGGCAGCTTAAACCATGAATATGTTCTTGT...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAAAACATGGAAAGAATTaGGGCCACAAGATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTKHGKN*GHKIQG
Trigger: TCCCTGGATCTTGTGGCCCCAATTCTTTCCATGTTT...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGAAACATGGAAAGAATTaGGGCCACAAGATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRKHGKN*GHKIQG
Trigger: TCCCTGGATCTTGTGGCCCCAATTCTTTCCATGTTT...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATTTACCATGGCTACAATaGCATAATACCAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDLPWLQ*HNTRKK
Trigger: TTTCTTCCTGGTATTATGCCATTGTAGCCATGGTAA...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATTTACCATGGCTACAATaGCATAATACCAGGAAGAAA +
Preference number: 4 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYLPWLQ*HNTRKK
Trigger: TTTCTTCCTGGTATTATGCCATTGTAGCCATGGTAA...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGTACCAGCTATTACCATaGCTACAATGGCATAATACC +
Preference number: 4 (lower is better)
Translates to: AFSVMTADQMGALLHRYLYQLLP*LQWHNT
Trigger: GGTATTATGCCATTGTAGCCATGGTAATAGCTGGTA...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGTACCAGCTATTACCATaGCTACAATGGCATAATACC +
Preference number: 4 (lower is better)
Translates to: FSVMTADQMGALLHRYLRYQLLP*LQWHNT
Trigger: GGTATTATGCCATTGTAGCCATGGTAATAGCTGGTA...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGTACCAGCTATTACCATaGCTACAATGGCATAATACC +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVEYQLLP*LQWHNT
Trigger: GGTATTATGCCATTGTAGCCATGGTAATAGCTGGTA...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATCCATTAGGTGCTTTATaGTCTGCTCAGCAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHPLGAL*SAQQLK
Trigger: CTTTAGCTGCTGAGCAGACCATAAAGCACCTAATGG...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGCCATTAGGTGCTTTATaGTCTGCTCAGCAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRPLGAL*SAQQLK
Trigger: CTTTAGCTGCTGAGCAGACCATAAAGCACCTAATGG...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACCATTAGGTGCTTTATaGTCTGCTCAGCAGCTAAAG +
Preference number: 4 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTPLGAL*SAQQLK
Trigger: CTTTAGCTGCTGAGCAGACCATAAAGCACCTAATGG...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGCATCAGAGCCAATGCTaGTCAATCGTAGCATTGAGT +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRHQSQC*SIVALS
Trigger: ACTCAATGCTACGATTGACCAGCATTGGCTCTGATG...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGACCAGCTTTGCTTCATaGGACTTGTTAACTATAACC +
Preference number: 4 (lower is better)
Translates to: AFSVMTADQMGALLHRYLTSFAS*DLLTIT
Trigger: GGTTATAGTTAACAAGTCCCATGAAGCAAAGCTGGT...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACACCAGCTTTGCTTCATaGGACTTGTTAACTATAACC +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYTSFAS*DLLTIT
Trigger: GGTTATAGTTAACAAGTCCCATGAAGCAAAGCTGGT...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGACCAGCTTTGCTTCATaGGACTTGTTAACTATAACC +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVETSFAS*DLLTIT
Trigger: GGTTATAGTTAACAAGTCCCATGAAGCAAAGCTGGT...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAAAATGTTTGCATCTTaGCTTGCCGAGGATAATAGG +
Preference number: 4 (lower is better)
Translates to: AFSVMTADQMGALLHRYLKMFAS*LAEDNR
Trigger: CCTATTATCCTCGGCAAGCCAAGATGCAAACATTTT...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AGTGTGGCTCTAGAACTTCCAATTCCATTGCTAGATGTGCCCTTTAAAAGATGGTTAATAGCTTCCTTTTaGAGTTCTCTTAGTTCGGCC +
Preference number: 4 (lower is better)
Translates to: SVALELPIPLLDVPFKRWLIASF*SSLSSA
Trigger: GGCCGAACTAAGAGAACTCCAAAAGGAAGCTATTAA...CCATCTTTTAAAGGGCACATCTAGCAATGGAATTGGAAGTTCTAGAGCCACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGTTAATAGCTTCCTTTTaGAGTTCTCTTAGTTCGGCC +
Preference number: 4 (lower is better)
Translates to: FSVMTADQMGALLHRYLRLIASF*SSLSSA
Trigger: GGCCGAACTAAGAGAACTCCAAAAGGAAGCTATTAA...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp AGTGTGGCTCTAGAACTTCCAATTCCATTGCTAGATGTGCCCTTTAAAAGATGGCTGACCTTTACAGTATaGGCCTTTAAGATACTGGAT +
Preference number: 4 (lower is better)
Translates to: SVALELPIPLLDVPFKRWLTFTV*AFKILD
Trigger: ATCCAGTATCTTAAAGGCCCATACTGTAAAGGTCAG...CCATCTTTTAAAGGGCACATCTAGCAATGGAATTGGAAGTTCTAGAGCCACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGAAGCCATCTTGGTGGTaGTTTCTGGAGGATGCATTT +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRKPSWW*FLEDAF
Trigger: AAATGCATCCTCCAGAAACCACCACCAAGATGGCTT...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAAAGCCATCTTGGTGGTaGTTTCTGGAGGATGCATTT +
Preference number: 4 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTKPSWW*FLEDAF
Trigger: AAATGCATCCTCCAGAAACCACCACCAAGATGGCTT...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTTGGTCCCTATGTATTTaGGTCTTATTTACATCCTTC +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVWSLCI*VLFTSF
Trigger: GAAGGATGTAAATAAGACCCAAATACATAGGGACCA...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354181.8
CDS-3UTR TCA 90 bp GTCATAGGTAAGACTCAAAAGCGGGATCTTATTCAAAAGGCAGGTATTTCCTTTCATCACAGGTGGCATTaGAAAATTGACTCGAGTTAC +
Preference number: 4 (lower is better)
Translates to: VIGKTQKRDLIQKAGISFHHRWH*KIDSSY
Trigger: GTAACTCGAGTCAATTTTTCAATGCCACCTGTGATG...AAAGGAAATACCTGCCTTTTGAATAAGATCCCGCTTTTGAGTCTTACCTATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGGAAGTGACGTTATTGTaGACAAAGTATTCATCACAG +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVEEVTLL*TKYSSQ
Trigger: CTGTGATGAATACTTTGTTCACAATAACGTCACTTC...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACATGCCCTGGATTGAAGTaGCGTTATTGTGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTCPGLK*RYCEQS
Trigger: ACTTTGTTCACAATAACGTCACTTCAATCCAGGGCA...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGAGTAATACAAGCAACTaGGGCCTCCAGTTTTTAGTG +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRSNTSN*GLQFLV
Trigger: CACTAAAAACTGGAGGCCTCAGTTGCTTGTATTACT...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp TCAAAGTGCGCTCGTAAGTATATGCTGATATATCACTGTCATGCTCTTGTATCTAGTAATACAAGCAACTaGGGCCTCCAGTTTTTAGTG +
Preference number: 4 (lower is better)
Translates to: SKCARKYMLIYHCHALVSSNTSN*GLQFLV
Trigger: CACTAAAAACTGGAGGCCTCAGTTGCTTGTATTACT...AGATACAAGAGCATGACAGTGATATATCAGCATATACTTACGAGCGCACTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561080.5
CDS-3UTR TCA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGCTCGTAAGTATATGCTaGTATATCACTGTCATGCAT +
Preference number: 4 (lower is better)
Translates to: AFSVMTADQMGALLHRYLLVSIC*YITVMH
Trigger: ATGCATGACAGTGATATATCAGCATATACTTACGAG...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR TCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGTTGAACCATGACTTCTaGGATTCATCTTTAATGCTG +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVELNHDF*DSSLML
Trigger: CAGCATTAAAGATGAATCTCAGAAGTCATGGTTCAA...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAACCCCTTCAATACATaGACCAAAAAGGACAACATT +
Preference number: 4 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYNPFNT*TKKDNI
Trigger: AATGTTGTCCTTTTTGGTGCATGTATTGAAGGGGTT...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAATGGCCAAGATAAGGTaGCTACCACCAAATTACCTT +
Preference number: 4 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTMAKIR*LPPNYL
Trigger: AAGGTAATTTGGTGGTAGGCACCTTATCTTGGCCAT...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ACCAGTTTTCCATGTAACAGTGATTTTGTGTTTCGGGCTGAAGCAGTGGTTATAAAAATTGCTCCACATTaGTGGGAAAGAAGGAGATGT +
Preference number: 4 (lower is better)
Translates to: TSFPCNSDFVFRAEAVVIKIAPH*WERRRC
Trigger: ACATCTCCTTCTTTCCCAGCAATGTGGAGCAATTTT...TATAACCACTGCTTCAGCCCGAAACACAAAATCACTGTTACATGGAAAACTGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp CTCCAACCACAAACAGCACTTCTAAAACTAACTTTACTTTCTGCCCATAATTTGTTTCGCCACACCTTGTaGTGTTTCAGTAGGAATGGT +
Preference number: 4 (lower is better)
Translates to: LQPQTALLKLTLLSAHNLFRHTL*CFSRNG
Trigger: ACCATTCCTACTGAAACAGCACAAGGTGTGGCGAAA...CAAATTATGGGCAGAAAGTAAAGTTAGTTTTAGAAGTGCTGTTTGTGGTTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTCAATGCCAATCTGTATaGCATTTTAGTAAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASQCQSV*HFSKVG
Trigger: ACCTACTTTACTAAAATGGCATACAGATTGGCATTG...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp GTCATAGGTAAGACTCAAAAGCGGGATCTTATTCAAAAGGCAGGTATTTCCTTTAATCCAGGAATGCCCTaGATTGAAGTGACGTTATTG +
Preference number: 4 (lower is better)
Translates to: VIGKTQKRDLIQKAGISFNPGMP*IEVTLL
Trigger: CAATAACGTCACTTCAATCCAGGGCATTCCTGGATT...AAAGGAAATACCTGCCTTTTGAATAAGATCCCGCTTTTGAGTCTTACCTATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGAATCCAGGAATGCCCTaGATTGAAGTGACGTTATTG +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRNPGMP*IEVTLL
Trigger: CAATAACGTCACTTCAATCCAGGGCATTCCTGGATT...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATTTCCAAGCTCTGCAATaGCAGCAGTTAGAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHFQALQ*QQLEVK
Trigger: CTTTACTTCTAACTGCTGCCATTGCAGAGCTTGGAA...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTTCCAAGCTCTGCAATaGCAGCAGTTAGAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRFQALQ*QQLEVK
Trigger: CTTTACTTCTAACTGCTGCCATTGCAGAGCTTGGAA...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGCTGTTGTCTTCTAATTaGGCTACTGTGAAGATCCGT +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRLLSSN*ATVKIR
Trigger: ACGGATCTTCACAGTAGCCCAATTAGAAGACAACAG...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATATGTTAAGCAGGTCCTaGAATCCTTCCATTGACTTC +
Preference number: 4 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHMLSRS*NPSIDF
Trigger: GAAGTCAATGGAAGGATTCCAGGACCTGCTTAACAT...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTACACAAGTATTTCCTTaGCACACTGAACTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVTQVFP*HTELSF
Trigger: AAAAGAAAGTTCAGTGTGCCAAGGAAATACTTGTGT...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
3UTR CAA 72 bp CATTTATTGGCTCAGCTTGTTAATTCTAATTTGCCTTaGACTGCTCAGACGTGGCTTGAAAGACTTGAGCAT +
Preference number: 4 (lower is better)
Translates to: HLLAQLVNSNLP*TAQTWLERLEH
Trigger: ATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAATTAACAAGCTGAGCCAATAAATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp CTCCAACCACAAACAGCACTTCTAAAACTAACTTTACTTTCTGCCCATAATTTGTGCCCTGGATTGAAGTaGCGTTATTGTGAACAAAGT +
Preference number: 4 (lower is better)
Translates to: LQPQTALLKLTLLSAHNLCPGLK*RYCEQS
Trigger: ACTTTGTTCACAATAACGTCACTTCAATCCAGGGCA...CAAATTATGGGCAGAAAGTAAAGTTAGTTTTAGAAGTGCTGTTTGTGGTTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp GTCATAGGTAAGACTCAAAAGCGGGATCTTATTCAAAAGGCAGGTATTTCCTTTTTCAGTGATGTTTTCTaGCTCTTCATGTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: VIGKTQKRDLIQKAGISFFSDVF*LFMFLC
Trigger: GCAAAGGAACATGAAGAGGCAGAAAACATCACTGAA...AAAGGAAATACCTGCCTTTTGAATAAGATCCCGCTTTTGAGTCTTACCTATGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR GCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTTCAGTGATGTTTTCTaGCTCTTCATGTTCCTTTGC +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRFSDVF*LFMFLC
Trigger: GCAAAGGAACATGAAGAGGCAGAAAACATCACTGAA...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAGTTCGAAGTAATGTTTaGAAGGCACATGCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTVRSNV*KAHAKF
Trigger: AAACTTGGCATGTGCCTTGCAAACATTACTTCGAAC...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGGTTCGAAGTAATGTTTaGAAGGCACATGCCAAGTTT +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRVRSNV*KAHAKF
Trigger: AAACTTGGCATGTGCCTTGCAAACATTACTTCGAAC...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR GCA 90 bp CTCCAACCACAAACAGCACTTCTAAAACTAACTTTACTTTCTGCCCATAATTTGACACCTAGGTCAGCTTaGTCCATGTCCTATTTAGTA +
Preference number: 4 (lower is better)
Translates to: LQPQTALLKLTLLSAHNLTPRSA*SMSYLV
Trigger: TACTAAATAGGACATGGAGCAAGCTGACCTAGGTGT...CAAATTATGGGCAGAAAGTAAAGTTAGTTTTAGAAGTGCTGTTTGTGGTTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp CTCCAACCACAAACAGCACTTCTAAAACTAACTTTACTTTCTGCCCATAATTTGAATCCAGGAATGCCCTaGATTGAAGTGACGTTATTG +
Preference number: 4 (lower is better)
Translates to: LQPQTALLKLTLLSAHNLNPGMP*IEVTLL
Trigger: CAATAACGTCACTTCAATCCAGGGCATTCCTGGATT...CAAATTATGGGCAGAAAGTAAAGTTAGTTTTAGAAGTGCTGTTTGTGGTTGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGACAAGAACATATTCATaGTTTAAGCTGCCTAAGACA +
Preference number: 4 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVETRTYS*FKLPKT
Trigger: TGTCTTAGGCAGCTTAAACCATGAATATGTTCTTGT...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAACCAGCTTTGCTTCATaGGACTTGTTAACTATAACC +
Preference number: 4 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTTSFAS*DLLTIT
Trigger: GGTTATAGTTAACAAGTCCCATGAAGCAAAGCTGGT...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp GTCATAGGTAAGACTCAAAAGCGGGATCTTATTCAAAAGGCAGGTATTTCCTTTACCAGCTTTGCTTCATaGGACTTGTTAACTATAACC +
Preference number: 4 (lower is better)
Translates to: VIGKTQKRDLIQKAGISFTSFAS*DLLTIT
Trigger: GGTTATAGTTAACAAGTCCCATGAAGCAAAGCTGGT...AAAGGAAATACCTGCCTTTTGAATAAGATCCCGCTTTTGAGTCTTACCTATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CCA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATAAAATGTTTGCATCTTaGCTTGCCGAGGATAATAGG +
Preference number: 4 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHKMFAS*LAEDNR
Trigger: CCTATTATCCTCGGCAAGCCAAGATGCAAACATTTT...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR CAA 72 bp CCAATTCATTTATTGGCTCAGCTTGTTAATTCTAATTaGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTT +
Preference number: 4 (lower is better)
Translates to: PIHLLAQLVNSN*PLTAQTWLERL
Trigger: AAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAATTAACAAGCTGAGCCAATAAATGAATTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAGAAGTGACGTTATTGTaGACAAAGTATTCATCACAG +
Preference number: 4 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTEVTLL*TKYSSQ
Trigger: CTGTGATGAATACTTTGTTCACAATAACGTCACTTC...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTCATAGGTAAGACTCAAAAGCGGGATCTTATTCAAAAGGCAGGTATTTCCTTTCTCGTAAGTATATGCTaGTATATCACTGTCATGCAT +
Preference number: 4 (lower is better)
Translates to: VIGKTQKRDLIQKAGISFLVSIC*YITVMH
Trigger: ATGCATGACAGTGATATATCAGCATATACTTACGAG...AAAGGAAATACCTGCCTTTTGAATAAGATCCCGCTTTTGAGTCTTACCTATGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR TCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTTGAACCATGACTTCTaGGATTCATCTTTAATGCTG +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRLNHDF*DSSLML
Trigger: CAGCATTAAAGATGAATCTCAGAAGTCATGGTTCAA...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR TCA 90 bp GTCATAGGTAAGACTCAAAAGCGGGATCTTATTCAAAAGGCAGGTATTTCCTTTTACTTGGCATTAAGTTaGATGCCTCAAGTCTTAACT +
Preference number: 4 (lower is better)
Translates to: VIGKTQKRDLIQKAGISFYLALS*MPQVLT
Trigger: AGTTAAGACTTGAGGCATTCAACTTAATGCCAAGTA...AAAGGAAATACCTGCCTTTTGAATAAGATCCCGCTTTTGAGTCTTACCTATGAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR GCA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATAACCCCTTCAATACATaGACCAAAAAGGACAACATT +
Preference number: 4 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHNPFNT*TKKDNI
Trigger: AATGTTGTCCTTTTTGGTGCATGTATTGAAGGGGTT...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
3UTR CAA 72 bp CATGACCTGCATTTCTTAGACAACAGCTTGTATGTTTaGTCCATGTTGTATAGAGAACCACAGACTATTTCA +
Preference number: 4 (lower is better)
Translates to: HDLHFLDNSLYV*SMLYREPQTIS
Trigger: TGAAATAGTCTGTGGTTCTCTATACAACATGGACAAAACATACAAGCTGTTGTCTAAGAAATGCAGGTCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR GCA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATCAATGCCAATCTGTATaGCATTTTAGTAAAGTAGGT +
Preference number: 4 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHQCQSV*HFSKVG
Trigger: ACCTACTTTACTAAAATGGCATACAGATTGGCATTG...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CCA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGACAAGAACATATTCATaGTTTAAGCTGCCTAAGACA +
Preference number: 4 (lower is better)
Translates to: IFAFSVMTADQMGALLHRTRTYS*FKLPKT
Trigger: TGTCTTAGGCAGCTTAAACCATGAATATGTTCTTGT...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CCA 90 bp CTCCAACCACAAACAGCACTTCTAAAACTAACTTTACTTTCTGCCCATAATTTGACAAGAACATATTCATaGTTTAAGCTGCCTAAGACA +
Preference number: 4 (lower is better)
Translates to: LQPQTALLKLTLLSAHNLTRTYS*FKLPKT
Trigger: TGTCTTAGGCAGCTTAAACCATGAATATGTTCTTGT...CAAATTATGGGCAGAAAGTAAAGTTAGTTTTAGAAGTGCTGTTTGTGGTTGGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS TCA 90 bp GACTGGTGTCTGACAAACCTTGCGAAGAGAAGCCCGGGGGTGCAGTaGGAGGGCGGAACCGTCCCGCGGGCGCCCGAAAGCCCCGCCCAG +
Preference number: 5 (lower is better)
Translates to: DWCLTNLAKRSPGVQ*EGGTVPRAPESPAQ
Trigger: CTGGGCGGGGCTTTCGGGCGCCCGCGGGACGGTTCCGCCCTCTCACTGCACCCCCGGGCTTCTCTTCGCAAGGTTTGTCAGACACCAGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397702.6
CDS TCA 90 bp TCCTCATTCGAGGTGAACCTTGCGAAGAGAAGCCCGGGGGTGCAGTaGGAGGGCGGAACCGTCCCGCGGGCGCCCGAAAGCCCCGCCCAG +
Preference number: 5 (lower is better)
Translates to: SSFEVNLAKRSPGVQ*EGGTVPRAPESPAQ
Trigger: CTGGGCGGGGCTTTCGGGCGCCCGCGGGACGGTTCCGCCCTCTCACTGCACCCCCGGGCTTCTCTTCGCAAGGTTCACCTCGAATGAGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561080.5
CDS TCA 90 bp CCATCTTGGTGGTGGTTTCTTGCGAAGAGAAGCCCGGGGGTGCAGTaGGAGGGCGGAACCGTCCCGCGGGCGCCCGAAAGCCCCGCCCAG +
Preference number: 5 (lower is better)
Translates to: PSWWWFLAKRSPGVQ*EGGTVPRAPESPAQ
Trigger: CTGGGCGGGGCTTTCGGGCGCCCGCGGGACGGTTCCGCCCTCTCACTGCACCCCCGGGCTTCTCTTCGCAAGAAACCACCACCAAGATGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561120.5
CDS CCA 90 bp AGGAGGATGCAGGGGCAGAGCGGATTCCTGTCTCCGAGAGGTCGGTaGGGGTGGCGCGCCCGCTCTTCTCCTAGCAGAAAGGTCCTCGGG +
Preference number: 5 (lower is better)
Translates to: RRMQGQSGFLSPRGR*GWRARSSPSRKVLG
Trigger: CCCGAGGACCTTTCTGCTAGGAGAAGAGCGGGCGCGCCACCCCCACCGACCTCTCGGAGACAGGAATCCGCTCTGCCCCTGCATCCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000558589.5
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
ENST00000675289.1
ENST00000676379.1
CDS-3UTR CAA 90 bp TCTCGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGGACGAGCCACCCCCTTaGCCGGAGGCGCGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: SRFTASSTSRVHAILPPQDEPPP*PEARSP
Trigger: GGGAGAACGCGCCTCCGGCAAAGGGGGTGGCTCGTC...CTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000354181.8
CDS TCA 90 bp CGCCGCAGCCCTTCCCTTCCCTCCCCGCTTGTTCCTCATTCGAGGTaGACCTTGCGAAGAGAAGCCCGGGGGTGCAGTGAGAGGGCGGAA +
Preference number: 5 (lower is better)
Translates to: RRSPSLPSPLVPHSR*TLRREARGCSERAE
Trigger: TTCCGCCCTCTCACTGCACCCCCGGGCTTCTCTTCGCAAGGTTCACCTCGAATGAGGAACAAGCGGGGAGGGAAGGGAAGGGCTGCGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561080.5
CDS GCA 90 bp GCCCTTCCCTTCCCTCCCCGCTTGTTCCTCATTCGAGGTGAACCTTaGGAAGAGAAGCCCGGGGGTGCAGTGAGAGGGCGGAACCGTCCC +
Preference number: 5 (lower is better)
Translates to: ALPFPPRLFLIRGEP*EEKPGGAVRGRNRP
Trigger: GGGACGGTTCCGCCCTCTCACTGCACCCCCGGGCTTCTCTTCGCAAGGTTCACCTCGAATGAGGAACAAGCGGGGAGGGAAGGGAAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561080.5
CDS CCA 90 bp GGGTGGCGCGCCCGCTCTTCTCCTAGCAGAAAGGTCCTCGGGGTCTaGGAGGAGGTTAGCGGATCAAGACACCTCGGACTGCAGCTCAGA +
Preference number: 5 (lower is better)
Translates to: GWRARSSPSRKVLGV*EEVSGSRHLGLQLR
Trigger: TCTGAGCTGCAGTCCGAGGTGTCTTGATCCGCTAACCTCCTCCCAGACCCCGAGGACCTTTCTGCTAGGAGAAGAGCGGGCGCGCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000558589.5
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTGATACTGGATCCTGGTaGGGCACAGTGGCTCACGCC +
Preference number: 5 (lower is better)
Translates to: RFTASSTSRVHAILPPQPDTGSW*GTVAHA
Trigger: GGCGTGAGCCACTGTGCCCAACCAGGATCCAGTATC...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp TCTCGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGTGCATCCGCCTCACATaGGACTGGTCCGGACGCATG +
Preference number: 5 (lower is better)
Translates to: SRFTASSTSRVHAILPPQCIRLT*DWSGRM
Trigger: CATGCGTCCGGACCAGTCCAATGTGAGGCGGATGCA...CTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp GACTGGTCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTGACGAGCCACCCCCTTaGCCGGAGGCGCGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: DWSGRMLSRSWNPSIDFADEPPP*PEARSP
Trigger: GGGAGAACGCGCCTCCGGCAAAGGGGGTGGCTCGTC...AGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGACCAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS GCA 90 bp TCCTCGGGGTCTGGGAGGAGGTTAGCGGATCAAGACACCTCGGACTaGAGCTCAGAGTCGTGGCAAGTCGTAGCTAGTCCACTGAGCCAC +
Preference number: 5 (lower is better)
Translates to: SSGSGRRLADQDTSD*SSESWQVVASPLSH
Trigger: GTGGCTCAGTGGACTAGCTACGACTTGCCACGACTCTGAGCTGCAGTCCGAGGTGTCTTGATCCGCTAACCTCCTCCCAGACCCCGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000558589.5
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS CCA 90 bp AGGAGGTTAGCGGATCAAGACACCTCGGACTGCAGCTCAGAGTCGTaGCAAGTCGTAGCTAGTCCACTGAGCCACGGTCCGCTCGCTAGG +
Preference number: 5 (lower is better)
Translates to: RRLADQDTSDCSSES*QVVASPLSHGPLAR
Trigger: CCTAGCGAGCGGACCGTGGCTCAGTGGACTAGCTACGACTTGCCACGACTCTGAGCTGCAGTCCGAGGTGTCTTGATCCGCTAACCTCCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000558589.5
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS CCA 90 bp CAGGTCCTCGATGACATCCTGGGGGTGAGAAGTCCGGTCACTGGGTaGATCCAGTGCAACAGTTGCCAGCGAAGTGGTGGCCCCAGACAT +
Preference number: 5 (lower is better)
Translates to: QVLDDILGVRSPVTG*IQCNSCQRSGGPRH
Trigger: ATGTCTGGGGCCACCACTTCGCTGGCAACTGTTGCACTGGATCCACCCAGTGACCGGACTTCTCACCCCCAGGATGTCATCGAGGACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000458406.6
ENST00000558589.5
ENST00000558667.5
ENST00000559236.5
ENST00000559484.1
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
ENST00000561120.5
ENST00000675289.1
ENST00000676379.1
CDS CCA 90 bp GTCGTCCTCGATGACATCCTGGGGGTGAGAAGTCCGGTCACTGGGTaGATCCAGTGCAACAGTTGCCAGCGAAGTGGTGGCCCCAGACAT +
Preference number: 5 (lower is better)
Translates to: VVLDDILGVRSPVTG*IQCNSCQRSGGPRH
Trigger: ATGTCTGGGGCCACCACTTCGCTGGCAACTGTTGCACTGGATCCACCCAGTGACCGGACTTCTCACCCCCAGGATGTCATCGAGGACGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397707.6
CDS-3UTR CAA 90 bp CTCGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCAATGCCCTCTCTCAGCTaGGCGGCCACCACCAGCTGG +
Preference number: 5 (lower is better)
Translates to: LALFWIAACAGASGTFVPMPSLS*AATTSW
Trigger: CCAGCTGGTGGTGGCCGCCAAGCTGAGAGAGGGCAT...TGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGGCGGGCATCTTCGCTTaGACGCCAGCCATTAGGCCA +
Preference number: 5 (lower is better)
Translates to: GERGLVGSLGHRNLRQRKAGIFA*TPAIRP
Trigger: TGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCGC...CTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS GCA 90 bp CTGGGGGTGAGAAGTCCGGTCACTGGGTGGATCCAGTGCAACAGTTaGCAGCGAAGTGGTGGCCCCAGACATCTCACTCATAGGCTCACT +
Preference number: 5 (lower is better)
Translates to: LGVRSPVTGWIQCNS*QRSGGPRHLTHRLT
Trigger: AGTGAGCCTATGAGTGAGATGTCTGGGGCCACCACTTCGCTGGCAACTGTTGCACTGGATCCACCCAGTGACCGGACTTCTCACCCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558589.5
ENST00000558667.5
ENST00000559236.5
ENST00000559484.1
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
ENST00000561120.5
ENST00000675289.1
ENST00000676379.1
CDS GCA 90 bp TGGTGTCTGACAAACACTACTGAGAGAAGGGTGAGCAGAGGAGGATaGAGGGGCAGAGCGGATTCCTGTCTCCGAGAGGTCGGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: WCLTNTTERRVSRGG*RGRADSCLREVGGG
Trigger: ACCCCCACCGACCTCTCGGAGACAGGAATCCGCTCTGCCCCTGCATCCTCCTCTGCTCACCCTTCTCTCAGTAGTGTTTGTCAGACACCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000458406.6
ENST00000559523.5
CDS GCA 90 bp TCTTGGTGGTGGTTTACTACTGAGAGAAGGGTGAGCAGAGGAGGATaGAGGGGCAGAGCGGATTCCTGTCTCCGAGAGGTCGGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: SWWWFTTERRVSRGG*RGRADSCLREVGGG
Trigger: ACCCCCACCGACCTCTCGGAGACAGGAATCCGCTCTGCCCCTGCATCCTCCTCTGCTCACCCTTCTCTCAGTAGTAAACCACCACCAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558589.5
CDS-3UTR CAA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAACTGTCTCGCTCTGTTTaGGATAGCCGCATGTGCCGG +
Preference number: 5 (lower is better)
Translates to: GGTRIGGILGPQESEATELSRSV*DSRMCR
Trigger: CCGGCACATGCGGCTATCCAAAACAGAGCGAGACAG...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp GGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGCTGTCTCGCTCTGTTTaGGATAGCCGCATGTGCCGG +
Preference number: 5 (lower is better)
Translates to: GERGLVGSLGHRNLRQRKLSRSV*DSRMCR
Trigger: CCGGCACATGCGGCTATCCAAAACAGAGCGAGACAG...CTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp GGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGGGATTGGTGGGATCCTaGGGCCACAGGAATCTGAGG +
Preference number: 5 (lower is better)
Translates to: GERGLVGSLGHRNLRQRKGLVGS*GHRNLR
Trigger: CCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCC...CTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTATGTCGACAATCCACTaGGGTCTGGTGGGAAAGGTG +
Preference number: 5 (lower is better)
Translates to: RFTASSTSRVHAILPPQPMSTIH*GLVGKV
Trigger: CACCTTTCCCACCAGACCCAAGTGGATTGTCGACAT...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676379.1
CDS-3UTR CAA 90 bp GGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGGGTTCCCCATTGGCTTaGCTGTGGCCAAAAACCCTC +
Preference number: 5 (lower is better)
Translates to: GERGLVGSLGHRNLRQRKGSPLA*LWPKTL
Trigger: GAGGGTTTTTGGCCACAGCAAAGCCAATGGGGAACC...CTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp TCTCGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCAGGTAGGTTCCCCATaGGCTTTGCTGTGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: SRFTASSTSRVHAILPPQQVGSP*ALLWPK
Trigger: TTTTGGCCACAGCAAAGCCAATGGGGAACCTACCTG...CTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGATGCCCTCTCTCAGCTaGGCGGCCACCACCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARMPSLS*AATTSW
Trigger: CCAGCTGGTGGTGGCCGCCAAGCTGAGAGAGGGCAT...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCATCGCGGGCATCTTCGCTTaGACGCCAGCCATTAGGCCA +
Preference number: 5 (lower is better)
Translates to: RSVLDSRMCRSIWDLCSIAGIFA*TPAIRP
Trigger: TGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCGC...GATGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TCTCGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCAAGATGGGCAGCAGTaGTCACTCGAACTGTGCCAA +
Preference number: 5 (lower is better)
Translates to: SRFTASSTSRVHAILPPQQDGQQ*SLELCQ
Trigger: TTGGCACAGTTCGAGTGACAACTGCTGCCCATCTTG...CTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTGAGCATCTGGGACCTTaGTTCCATCATCAAAGTGCG +
Preference number: 5 (lower is better)
Translates to: RFTASSTSRVHAILPPQPEHLGP*FHHQSA
Trigger: CGCACTTTGATGATGGAACAAAGGTCCCAGATGCTC...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp CGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCATCTGCATCCGCCTCACATaGGACTGGTCCGGACGCATG +
Preference number: 5 (lower is better)
Translates to: RSVLDSRMCRSIWDLCSICIRLT*DWSGRM
Trigger: CATGCGTCCGGACCAGTCCAATGTGAGGCGGATGCA...GATGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS TCA 90 bp GTGGAGGTCCTTCCTCCAATCGAAGCAAAGCAAACCGGGCTGCACTaGGGGACAGCCCACGGATACCATCACCCCATTCTTTCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: VEVLPPIEAKQTGLH*GTAHGYHHPILSQL
Trigger: GAGCTGAGAAAGAATGGGGTGATGGTATCCGTGGGCTGTCCCTCAGTGCAGCCCGGTTTGCTTTGCTTCGATTGGAGGAAGGACCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558589.5
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560023.1
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
ENST00000676379.1
CDS-3UTR CAA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTAAAACATGGAAAGAATaGGGGCCACAAGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: RFTASSTSRVHAILPPQPKTWKE*GPQDPG
Trigger: CCCTGGATCTTGTGGCCCCAATTCTTTCCATGTTTT...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp CTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTCTGTCTGACGAGCCACCCCCTTaGCCGGAGGCGCGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: LVNRSIEFRSFTNCASLSDEPPP*PEARSP
Trigger: GGGAGAACGCGCCTCCGGCAAAGGGGGTGGCTCGTC...AGACAGAGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGACGAGCCACCCCCTTaGCCGGAGGCGCGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQDEPPP*PEARSP
Trigger: GGGAGAACGCGCCTCCGGCAAAGGGGGTGGCTCGTC...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTATAGCGTGGATCAGATaGCTAAAAGGTGTACACCCG +
Preference number: 5 (lower is better)
Translates to: RFTASSTSRVHAILPPQPIAWIR*LKGVHP
Trigger: CGGGTGTACACCTTTTAGCAATCTGATCCACGCTAT...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676379.1
CDS-3UTR CAA 90 bp CGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCATCCCCTTCCCTCCCCGCTaGTTCCTCATTCGAGGTGAA +
Preference number: 5 (lower is better)
Translates to: RSVLDSRMCRSIWDLCSIPFPPR*FLIRGE
Trigger: TTCACCTCGAATGAGGAACAAGCGGGGAGGGAAGGG...GATGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000561080.5
CDS-3UTR CAA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCAATGCCCTCTCTCAGCTaGGCGGCCACCACCAGCTGG +
Preference number: 5 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQAMPSLS*AATTSW
Trigger: CCAGCTGGTGGTGGCCGCCAAGCTGAGAGAGGGCAT...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCATGCCCTCTCTCAGCTaGGCGGCCACCACCAGCTGG +
Preference number: 5 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFMPSLS*AATTSW
Trigger: CCAGCTGGTGGTGGCCGCCAAGCTGAGAGAGGGCAT...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGGCGGGCATCTTCGCTTaGACGCCAGCCATTAGGCCA +
Preference number: 5 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARAGIFA*TPAIRP
Trigger: TGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCGC...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCCTCTCTGTCTCGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACGAGCATCTGGGACCTTaGTTCCATCATCAAAGTGCG +
Preference number: 5 (lower is better)
Translates to: ASLSRSVLDSRMCRSIWDEHLGP*FHHQSA
Trigger: CGCACTTTGATGATGGAACAAAGGTCCCAGATGCTC...GTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCGAGACAGAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAACCTGGAATCCTTCCATaGACTTCGCTTTTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: GGTRIGGILGPQESEATEPGILP*TSLFVP
Trigger: GGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGG...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGTGCATCCGCCTCACATaGGACTGGTCCGGACGCATG +
Preference number: 5 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKCIRLT*DWSGRM
Trigger: CATGCGTCCGGACCAGTCCAATGTGAGGCGGATGCA...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCGTGGCTTGAAAGACTaGAGCATTGTTCTGATGTTG +
Preference number: 5 (lower is better)
Translates to: RFTASSTSRVHAILPPQPRGLKD*SIVLML
Trigger: CAACATCAGAACAATGCTCAAGTCTTTCAAGCCACG...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CAA 90 bp TCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGTCCCCGATACTGGATCCTGGTaGGGCACAGTGGCTCACGCC +
Preference number: 5 (lower is better)
Translates to: SLGHRNLRQRKIYRVIVPDTGSW*GTVAHA
Trigger: GGCGTGAGCCACTGTGCCCAACCAGGATCCAGTATC...GGGGACGATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGACGAGCCACCCCCTTaGCCGGAGGCGCGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVDEPPP*PEARSP
Trigger: GGGAGAACGCGCCTCCGGCAAAGGGGGTGGCTCGTC...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTAGAATCCCCATAACTTaGATGGGACTGTCATGTTGT +
Preference number: 5 (lower is better)
Translates to: RFTASSTSRVHAILPPQPRIPIT*MGLSCC
Trigger: ACAACATGACAGTCCCATCAAAGTTATGGGGATTCT...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp CTCGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCACAGGTAGGTTCCCCATaGGCTTTGCTGTGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: LALFWIAACAGASGTFVPQVGSP*ALLWPK
Trigger: TTTTGGCCACAGCAAAGCCAATGGGGAACCTACCTG...TGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGATGCCCTCTCTCAGCTaGGCGGCCACCACCAGCTGG +
Preference number: 5 (lower is better)
Translates to: PLTAQTWLERLEHCSDVEMPSLS*AATTSW
Trigger: CCAGCTGGTGGTGGCCGCCAAGCTGAGAGAGGGCAT...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCCCCATCACCACCGTGTaGTGCTTCATGCCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIPITTV*CFMPPR
Trigger: CCTTGGGGGCATGAAGCACAACACGGTGGTGATGGG...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCGCGGGCATCTTCGCTTaGACGCCAGCCATTAGGCCA +
Preference number: 5 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIAGIFA*TPAIRP
Trigger: TGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCGC...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAACACCACACATCAATGTaGCCCTCAGAAAATTGCTCC +
Preference number: 5 (lower is better)
Translates to: GGTRIGGILGPQESEATEHHTSM*PSENCS
Trigger: GGAGCAATTTTCTGAGGGCAACATTGATGTGTGGTG...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp GGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGCACTTTCGCCACACCTaGTGCTGTTTCAGTAGGAAT +
Preference number: 5 (lower is better)
Translates to: GERGLVGSLGHRNLRQRKHFRHT*CCFSRN
Trigger: ATTCCTACTGAAACAGCACAAGGTGTGGCGAAAGTG...CTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGCTGTCTCGCTCTGTTTaGGATAGCCGCATGTGCCGG +
Preference number: 5 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARLSRSV*DSRMCR
Trigger: CCGGCACATGCGGCTATCCAAAACAGAGCGAGACAG...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATGCATCCGCCTCACATaGGACTGGTCCGGACGCATG +
Preference number: 5 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSCIRLT*DWSGRM
Trigger: CATGCGTCCGGACCAGTCCAATGTGAGGCGGATGCA...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CCACCCCGGACAAGTAGGACTCGCTCTAGTCCCTCGGTAAGCACCTCTAGGAACCTGCTCAGACGTGGCTaGAAAGACTTGAGCATTGTT +
Preference number: 5 (lower is better)
Translates to: PPRTSRTRSSPSVSTSRNLLRRG*KDLSIV
Trigger: AACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAG...GTTCCTAGAGGTGCTTACCGAGGGACTAGAGCGAGTCCTACTTGTCCGGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TCTCGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCATGTAACAGTGATTTaGTGTTTCGGGCTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SRFTASSTSRVHAILPPQHVTVI*CFGLKQ
Trigger: CTGCTTCAGCCCGAAACACAAAATCACTGTTACATG...CTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp TTGTTAGCATGTTTAGGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAAGGATTGGTGGGATCCTaGGGCCACAGGAATCTGAGG +
Preference number: 5 (lower is better)
Translates to: LLACLGGTRIGGILGPQEGLVGS*GHRNLR
Trigger: CCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCC...TTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCCTAAACATGCTAACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS TCA 90 bp ACCTGGAATGTCATCGATCTTTGTCGGTGTCACCATGAACCGAACTaGAGCCATCTTGGTGGTGGTTTCTTGCGAAGAGAAGCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: TWNVIDLCRCHHEPN*SHLGGGFLRREARG
Trigger: CCCCCGGGCTTCTCTTCGCAAGAAACCACCACCAAGATGGCTTCAGTTCGGTTCATGGTGACACCGACAAAGATCGATGACATTCCAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561120.5
CDS-3UTR CAA 90 bp TCTCGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGAAGACATCAGAAGATTaGGCTGAAGGCTTTTCGATG +
Preference number: 5 (lower is better)
Translates to: SRFTASSTSRVHAILPPQKTSED*AEGFSM
Trigger: CATCGAAAAGCCTTCAGCCAAATCTTCTGATGTCTT...CTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTATGCCCTCTCTCAGCTaGGCGGCCACCACCAGCTGG +
Preference number: 5 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASMPSLS*AATTSW
Trigger: CCAGCTGGTGGTGGCCGCCAAGCTGAGAGAGGGCAT...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACAATGCCCTCTCTCAGCTaGGCGGCCACCACCAGCTGG +
Preference number: 5 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTMPSLS*AATTSW
Trigger: CCAGCTGGTGGTGGCCGCCAAGCTGAGAGAGGGCAT...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTATGCCCTCTCTCAGCTaGGCGGCCACCACCAGCTGG +
Preference number: 5 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEAMPSLS*AATTSW
Trigger: CCAGCTGGTGGTGGCCGCCAAGCTGAGAGAGGGCAT...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATATGCCCTCTCTCAGCTaGGCGGCCACCACCAGCTGG +
Preference number: 5 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYMPSLS*AATTSW
Trigger: CCAGCTGGTGGTGGCCGCCAAGCTGAGAGAGGGCAT...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCCCCATCACCACCGTGTaGTGCTTCATGCCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFPITTV*CFMPPR
Trigger: CCTTGGGGGCATGAAGCACAACACGGTGGTGATGGG...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AAAAGACTTAAGATCCTATCCGCTTTGCCATCCTCAGTGGGCCTGGAGGTTGAACCCATCACCACCGTGTaGTGCTTCATGCCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: KRLKILSALPSSVGLEVEPITTV*CFMPPR
Trigger: CCTTGGGGGCATGAAGCACAACACGGTGGTGATGGG...TTCAACCTCCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTTAAGTCTTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAGCGGGCATCTTCGCTTaGACGCCAGCCATTAGGCCA +
Preference number: 5 (lower is better)
Translates to: TADQMGALLHRYLRLSSSAGIFA*TPAIRP
Trigger: TGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCGC...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGAAAATTGCTCCACATaGCTGGGAAAGAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: GGTRIGGILGPQESEATEENCST*LGKKEM
Trigger: CATCTCCTTCTTTCCCAGCAATGTGGAGCAATTTTC...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp CGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCATCGAGCATCTGGGACCTTaGTTCCATCATCAAAGTGCG +
Preference number: 5 (lower is better)
Translates to: RSVLDSRMCRSIWDLCSIEHLGP*FHHQSA
Trigger: CGCACTTTGATGATGGAACAAAGGTCCCAGATGCTC...GATGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCACTGTCTCGCTCTGTTTaGGATAGCCGCATGTGCCGG +
Preference number: 5 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSLSRSV*DSRMCR
Trigger: CCGGCACATGCGGCTATCCAAAACAGAGCGAGACAG...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCATCCCTGGAATCCTTCCATaGACTTCGCTTTTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: RSVLDSRMCRSIWDLCSIPGILP*TSLFVP
Trigger: GGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGG...GATGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCATGCATCCGCCTCACATaGGACTGGTCCGGACGCATG +
Preference number: 5 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQACIRLT*DWSGRM
Trigger: CATGCGTCCGGACCAGTCCAATGTGAGGCGGATGCA...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTTTTGCTTCATGGGACTaGTTAACTATAACCTCGTTG +
Preference number: 5 (lower is better)
Translates to: RFTASSTSRVHAILPPQPFASWD*LTITSL
Trigger: CAACGAGGTTATAGTTAACAAGTCCCATGAAGCAAA...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp TCTCGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGAATTCTAATTTGCCTTaGACTGCTCAGACGTGGCTT +
Preference number: 5 (lower is better)
Translates to: SRFTASSTSRVHAILPPQNSNLP*TAQTWL
Trigger: AAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAATT...CTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CAA 90 bp TCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGTCCCCAAGATCCTATCCGCTTaGCCATCCTCAGTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: SLGHRNLRQRKIYRVIVPKILSA*PSSVGL
Trigger: CAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTT...GGGGACGATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp AGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCATCATCAAAGTGCGCTCGATAGCGTGGATCAGATaGCTAAAAGGTGTACACCCG +
Preference number: 5 (lower is better)
Translates to: SRMCRSIWDLCSIIKVRSIAWIR*LKGVHP
Trigger: CGGGTGTACACCTTTTAGCAATCTGATCCACGCTAT...CGAGCGCACTTTGATGATGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGGGATGCATTTTGTTCTaGCGAAGAGAAGCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARGCILF*RREARG
Trigger: CCCCCGGGCTTCTCTTCGCAAGAACAAAATGCATCC...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000558667.5
CDS CCA 90 bp TGGGCGAAGTGCGTGCAGGCAAACCTTTATCAGGCGACTATAGCGTaGATCAGATTGCTAAAAGGTGTACACCCGGCCACCTGTTGTGTA +
Preference number: 5 (lower is better)
Translates to: WAKCVQANLYQATIA*IRLLKGVHPATCCV
Trigger: TACACAACAGGTGGCCGGGTGTACACCTTTTAGCAATCTGATCCACGCTATAGTCGCCTGATAAAGGTTTGCCTGCACGCACTTCGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559664.5
ENST00000561080.5
ENST00000675289.1
ENST00000676379.1
CDS-3UTR CAA 90 bp CCTTCTCCTGATAGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAGGTTCCCCATTGGCTTaGCTGTGGCCAAAAACCCTC +
Preference number: 5 (lower is better)
Translates to: PSPDRFLSLRPHQSQCWSGSPLA*LWPKTL
Trigger: GAGGGTTTTTGGCCACAGCAAAGCCAATGGGGAACC...TGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCTATCAGGAGAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCGGTTCCCCATTGGCTTaGCTGTGGCCAAAAACCCTC +
Preference number: 5 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIGSPLA*LWPKTL
Trigger: GAGGGTTTTTGGCCACAGCAAAGCCAATGGGGAACC...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGTCCCCCAGGTAGGTTCCCCATaGGCTTTGCTGTGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: SLGHRNLRQRKIYRVIVPQVGSP*ALLWPK
Trigger: TTTTGGCCACAGCAAAGCCAATGGGGAACCTACCTG...GGGGACGATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGCAGGTAGGTTCCCCATaGGCTTTGCTGTGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARQVGSP*ALLWPK
Trigger: TTTTGGCCACAGCAAAGCCAATGGGGAACCTACCTG...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGCAGGTAGGTTCCCCATaGGCTTTGCTGTGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKQVGSP*ALLWPK
Trigger: TTTTGGCCACAGCAAAGCCAATGGGGAACCTACCTG...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGTGTGGCTCTAGAACTTCCAATTCCATTGCTAGATGTGCCCTTTAAAAGATGGATGCCCTCTCTCAGCTaGGCGGCCACCACCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SVALELPIPLLDVPFKRWMPSLS*AATTSW
Trigger: CCAGCTGGTGGTGGCCGCCAAGCTGAGAGAGGGCAT...CCATCTTTTAAAGGGCACATCTAGCAATGGAATTGGAAGTTCTAGAGCCACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CAA 90 bp CCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTCCCATCACCACCGTGTaGTGCTTCATGCCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: PMLVNRSIEFRSFTNCASPITTV*CFMPPR
Trigger: CCTTGGGGGCATGAAGCACAACACGGTGGTGATGGG...AGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCCCATCACCACCGTGTaGTGCTTCATGCCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGPITTV*CFMPPR
Trigger: CCTTGGGGGCATGAAGCACAACACGGTGGTGATGGG...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGAGTGCGGGCATCTTCGCTTaGACGCCAGCCATTAGGCCA +
Preference number: 5 (lower is better)
Translates to: FLSLRPHQSQCWSIVALSAGIFA*TPAIRP
Trigger: TGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCGC...ACTCAATGCTACGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGCAAGATGGGCAGCAGTaGTCACTCGAACTGTGCCAA +
Preference number: 5 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARQDGQQ*SLELCQ
Trigger: TTGGCACAGTTCGAGTGACAACTGCTGCCCATCTTG...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CAA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTTTCATTTGGATACTGTaGTCTTCTAATTGGGCTACT +
Preference number: 5 (lower is better)
Translates to: RFTASSTSRVHAILPPQPFIWIL*SSNWAT
Trigger: AGTAGCCCAATTAGAAGACAACAGTATCCAAATGAA...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp AGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGCTGTCTCGCTCTGTTTaGGATAGCCGCATGTGCCGG +
Preference number: 5 (lower is better)
Translates to: RFLSLRPHQSQCWSIVALLSRSV*DSRMCR
Trigger: CCGGCACATGCGGCTATCCAAAACAGAGCGAGACAG...CAATGCTACGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGTTAGCATGTTTAGGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCGGTCTTTCACCAATaGTGCCTCTCTGTCTCGCTC +
Preference number: 5 (lower is better)
Translates to: LLACLGGTRIGGILGPQESVFHQ*CLSVSL
Trigger: GAGCGAGACAGAGAGGCACAATTGGTGAAAGACCGA...TTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCCTAAACATGCTAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp ATCACTTCACTGCCACCACCCCGGACAAGTAGGACTCGCTCTAGTCCCTCGGTATGGTCAATCGTAGCATaGAGTTTCGGTCTTTCACCA +
Preference number: 5 (lower is better)
Translates to: ITSLPPPRTSRTRSSPSVWSIVA*SFGLSP
Trigger: TGGTGAAAGACCGAAACTCAATGCTACGATTGACCA...TACCGAGGGACTAGAGCGAGTCCTACTTGTCCGGGGTGGTGGCAGTGAAGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CTCGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCACGGGATGCCATGTACTaGTCTTTTGTCCAAGTCATG +
Preference number: 5 (lower is better)
Translates to: LALFWIAACAGASGTFVPRDAMY*SFVQVM
Trigger: CATGACTTGGACAAAAGACAAGTACATGGCATCCCG...TGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTTGCATCCGCCTCACATaGGACTGGTCCGGACGCATG +
Preference number: 5 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGCIRLT*DWSGRM
Trigger: CATGCGTCCGGACCAGTCCAATGTGAGGCGGATGCA...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGTGCATCCGCCTCACATaGGACTGGTCCGGACGCATG +
Preference number: 5 (lower is better)
Translates to: PLTAQTWLERLEHCSDVECIRLT*DWSGRM
Trigger: CATGCGTCCGGACCAGTCCAATGTGAGGCGGATGCA...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAAATTCTAATTTGCCTTaGACTGCTCAGACGTGGCTT +
Preference number: 5 (lower is better)
Translates to: GGTRIGGILGPQESEATENSNLP*TAQTWL
Trigger: AAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAATT...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CAA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTTATGTTTTGTCCATGTaGTATAGAGAACCACAGACT +
Preference number: 5 (lower is better)
Translates to: RFTASSTSRVHAILPPQPYVLSM*YREPQT
Trigger: AGTCTGTGGTTCTCTATACAACATGGACAAAACATA...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CAA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAACACGATAAGGGATTTTaGTTAGCATGTTTAGGGGGA +
Preference number: 5 (lower is better)
Translates to: GGTRIGGILGPQESEATEHDKGF*LACLGG
Trigger: TCCCCCTAAACATGCTAACAAAAATCCCTTATCGTG...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp CGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGCCTCTAAATCAAGAACTGTaGCAGCATCTCCTTTCAATA +
Preference number: 5 (lower is better)
Translates to: RFTASSTSRVHAILPPQPLNQEL*QHLLSI
Trigger: TATTGAAAGGAGATGCTGCAACAGTTCTTGATTTAG...AGGCTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGCGAACTGAAGCCATCTaGGTGGTGGTTTCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKRTEAI*VVVSGG
Trigger: TCCTCCAGAAACCACCACCAAGATGGCTTCAGTTCG...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558667.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGATGCCATGTCGACAATCCACTaGGGTCTGGTGGGAAAGGTG +
Preference number: 5 (lower is better)
Translates to: LSRSWNPSIDFAFCPRDAMSTIH*GLVGKV
Trigger: CACCTTTCCCACCAGACCCAAGTGGATTGTCGACAT...GGCATCCCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TCTCGGTTCACTGCAAGTTCCACCTCCCGGGTTCACGCCATTCTCCCGCCTCAGATGTTGTTAATTTCCTaGGTCTTAGAGCAAACGTCA +
Preference number: 5 (lower is better)
Translates to: SRFTASSTSRVHAILPPQMLLIS*VLEQTS
Trigger: TGACGTTTGCTCTAAGACCAAGGAAATTAACAACAT...CTGAGGCGGGAGAATGGCGTGAACCCGGGAGGTGGAACTTGCAGTGAACCGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGACAGCATCACCGAACTaGTCTCTGAGAACAACCCCT +
Preference number: 5 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKTASPN*SLRTTP
Trigger: AGGGGTTGTTCTCAGAGACAAGTTCGGTGATGCTGT...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTACAGCATCACCGAACTaGTCTCTGAGAACAACCCCT +
Preference number: 5 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGTASPN*SLRTTP
Trigger: AGGGGTTGTTCTCAGAGACAAGTTCGGTGATGCTGT...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGTTAGCATGTTTAGGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAAACAGCATCACCGAACTaGTCTCTGAGAACAACCCCT +
Preference number: 5 (lower is better)
Translates to: LLACLGGTRIGGILGPQETASPN*SLRTTP
Trigger: AGGGGTTGTTCTCAGAGACAAGTTCGGTGATGCTGT...TTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCCTAAACATGCTAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp CGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCATCGGTATGATGTTATCCTaGGCAATAGCTTGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: RSVLDSRMCRSIWDLCSIGMMLS*AIACSS
Trigger: GCTGCTACAAGCTATTGCCAAGGATAACATCATACC...GATGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCGGTTCCCCATTGGCTTaGCTGTGGCCAAAAACCCTC +
Preference number: 5 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFGSPLA*LWPKTL
Trigger: GAGGGTTTTTGGCCACAGCAAAGCCAATGGGGAACC...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGGGTTCCCCATTGGCTTaGCTGTGGCCAAAAACCCTC +
Preference number: 5 (lower is better)
Translates to: RFLSLRPHQSQCWSIVALGSPLA*LWPKTL
Trigger: GAGGGTTTTTGGCCACAGCAAAGCCAATGGGGAACC...CAATGCTACGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAGACCTTTTCCTGCTTaGAGCTGTGAGGCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKRPFPA*SCEAKV
Trigger: CACCTTTGCCTCACAGCTCAAAGCAGGAAAAGGTCT...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGTCAATGCCAATCTGTATGCCATTTTAGTAAAGTAGGTAAGGAGAGTAGCCGCCCCATCACCACCGTGTaGTGCTTCATGCCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: GQCQSVCHFSKVGKESSRPITTV*CFMPPR
Trigger: CCTTGGGGGCATGAAGCACAACACGGTGGTGATGGG...GCGGCTACTCTCCTTACCTACTTTACTAAAATGGCATACAGATTGGCATTGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CAA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATCCCATCACCACCGTGTaGTGCTTCATGCCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDPITTV*CFMPPR
Trigger: CCTTGGGGGCATGAAGCACAACACGGTGGTGATGGG...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACAGCGGGCATCTTCGCTTaGACGCCAGCCATTAGGCCA +
Preference number: 5 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTAGIFA*TPAIRP
Trigger: TGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCGC...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGCGGGCATCTTCGCTTaGACGCCAGCCATTAGGCCA +
Preference number: 5 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVAGIFA*TPAIRP
Trigger: TGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCGC...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTGCGGGCATCTTCGCTTaGACGCCAGCCATTAGGCCA +
Preference number: 5 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASAGIFA*TPAIRP
Trigger: TGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCGC...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGCGGGCATCTTCGCTTaGACGCCAGCCATTAGGCCA +
Preference number: 5 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYAGIFA*TPAIRP
Trigger: TGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCGC...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCATCGAAAATTGCTCCACATaGCTGGGAAAGAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: RSVLDSRMCRSIWDLCSIENCST*LGKKEM
Trigger: CATCTCCTTCTTTCCCAGCAATGTGGAGCAATTTTC...GATGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559523.5
CDS-3UTR CAA 90 bp CCTCACATTGGACTGGTCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATCACCACACATCAATGTaGCCCTCAGAAAATTGCTCC +
Preference number: 5 (lower is better)
Translates to: PHIGLVRTHVKQVLESFHHHTSM*PSENCS
Trigger: GGAGCAATTTTCTGAGGGCAACATTGATGTGTGGTG...ATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGACCAGTCCAATGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCACTGTCTCGCTCTGTTTaGGATAGCCGCATGTGCCGG +
Preference number: 5 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSLSRSV*DSRMCR
Trigger: CCGGCACATGCGGCTATCCAAAACAGAGCGAGACAG...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATCGGTCTTTCACCAATaGTGCCTCTCTGTCTCGCTC +
Preference number: 5 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSSVFHQ*CLSVSL
Trigger: GAGCGAGACAGAGAGGCACAATTGGTGAAAGACCGA...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CCGGAGCATCTGGGACCTTTGTTCCATCATCAAAGTGCGCTCGTAAGTATATGCTCGGTCTTTCACCAATaGTGCCTCTCTGTCTCGCTC +
Preference number: 5 (lower is better)
Translates to: PEHLGPLFHHQSALVSICSVFHQ*CLSVSL
Trigger: GAGCGAGACAGAGAGGCACAATTGGTGAAAGACCGA...GCATATACTTACGAGCGCACTTTGATGATGGAACAAAGGTCCCAGATGCTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCATCCCATGTACTTGTCTTTaGTCCAAGTCATGTGCACCT +
Preference number: 5 (lower is better)
Translates to: RSVLDSRMCRSIWDLCSIPCTCL*SKSCAP
Trigger: AGGTGCACATGACTTGGACAAAAGACAAGTACATGG...GATGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTTGCATCCGCCTCACATaGGACTGGTCCGGACGCATG +
Preference number: 5 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEACIRLT*DWSGRM
Trigger: CATGCGTCCGGACCAGTCCAATGTGAGGCGGATGCA...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGTTAACTATAACCTCGTaGAGTTTCACTGCTGTATGC +
Preference number: 5 (lower is better)
Translates to: GERGLVGSLGHRNLRQRKLTITS*SFTAVC
Trigger: GCATACAGCAGTGAAACTCAACGAGGTTATAGTTAA...CTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp GGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGGAAGATTTCACATACTaGAAATTACTGCTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: GERGLVGSLGHRNLRQRKEDFTY*KLLLSQ
Trigger: CTGGCTGAGCAGTAATTTCAAGTATGTGAAATCTTC...CTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS TCA 90 bp TCTTACTCGGGAACTAGATCGAGAGCTGAGGTCCGGACTGGTGTCTaGCAAACCTGGAATGTCATCGATCTTTGTCGGTGTCACCATGAA +
Preference number: 5 (lower is better)
Translates to: SYSGTRSRAEVRTGV*QTWNVIDLCRCHHE
Trigger: TTCATGGTGACACCGACAAAGATCGATGACATTCCAGGTTTGTCAGACACCAGTCCGGACCTCAGCTCTCGATCTAGTTCCCGAGTAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558589.5
ENST00000558667.5
ENST00000559236.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
ENST00000561120.5
ENST00000675289.1
ENST00000676379.1
CDS-3UTR CAA 90 bp CTCCTGATAGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGACAGCATCACCGAACTaGTCTCTGAGAACAACCCCT +
Preference number: 5 (lower is better)
Translates to: LLIGFCLFVLIRANAGQSTASPN*SLRTTP
Trigger: AGGGGTTGTTCTCAGAGACAAGTTCGGTGATGCTGT...CGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCTATCAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGGTTCCCCATTGGCTTaGCTGTGGCCAAAAACCCTC +
Preference number: 5 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSGSPLA*LWPKTL
Trigger: GAGGGTTTTTGGCCACAGCAAAGCCAATGGGGAACC...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTGGTTCCCCATTGGCTTaGCTGTGGCCAAAAACCCTC +
Preference number: 5 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGGSPLA*LWPKTL
Trigger: GAGGGTTTTTGGCCACAGCAAAGCCAATGGGGAACC...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CAGAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGGGTTCCCCATTGGCTTaGCTGTGGCCAAAAACCCTC +
Preference number: 5 (lower is better)
Translates to: QSQCWSIVALSFGLSPIVGSPLA*LWPKTL
Trigger: GAGGGTTTTTGGCCACAGCAAAGCCAATGGGGAACC...CACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACAGGTAGGTTCCCCATaGGCTTTGCTGTGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQAQVGSP*ALLWPK
Trigger: TTTTGGCCACAGCAAAGCCAATGGGGAACCTACCTG...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGCAGGTAGGTTCCCCATaGGCTTTGCTGTGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSEQVGSP*ALLWPK
Trigger: TTTTGGCCACAGCAAAGCCAATGGGGAACCTACCTG...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGAAAACATGGAAAGAATaGGGGCCACAAGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARKTWKE*GPQDPG
Trigger: CCCTGGATCTTGTGGCCCCAATTCTTTCCATGTTTT...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTAAAACATGGAAAGAATaGGGGCCACAAGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGKTWKE*GPQDPG
Trigger: CCCTGGATCTTGTGGCCCCAATTCTTTCCATGTTTT...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGAATCGGGGTCTCCAGTaGGGTGTTCGAAGTAATGTT +
Preference number: 5 (lower is better)
Translates to: RMLSRSWNPSIDFAFCPRNRGLQ*GVRSNV
Trigger: AACATTACTTCGAACACCCAACTGGAGACCCCGATT...CCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGTTAGCATGTTTAGGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAAAATCGGGGTCTCCAGTaGGGTGTTCGAAGTAATGTT +
Preference number: 5 (lower is better)
Translates to: LLACLGGTRIGGILGPQENRGLQ*GVRSNV
Trigger: AACATTACTTCGAACACCCAACTGGAGACCCCGATT...TTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCCTAAACATGCTAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp GGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAATTCTTTCTCAGCTCCTaGGTATTCAATGTACTTGTA +
Preference number: 5 (lower is better)
Translates to: GGTRIGGILGPQESEATEFFLSS*VFNVLV
Trigger: TACAAGTACATTGAATACCAAGGAGCTGAGAAAGAA...TTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGAGGAGGCGAGGATGCTaGACATGTAAGTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARRRRGC*TCKSSS
Trigger: AGATGAAGACTTACATGTCAAGCATCCTCGCCTCCT...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAGACCTTTTCCTGCTTaGAGCTGTGAGGCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIRPFPA*SCEAKV
Trigger: CACCTTTGCCTCACAGCTCAAAGCAGGAAAAGGTCT...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGATGCCCTCTCTCAGCTaGGCGGCCACCACCAGCTGG +
Preference number: 5 (lower is better)
Translates to: IFAFSVMTADQMGALLHRMPSLS*AATTSW
Trigger: CCAGCTGGTGGTGGCCGCCAAGCTGAGAGAGGGCAT...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGTGTGGCTCTAGAACTTCCAATTCCATTGCTAGATGTGCCCTTTAAAAGATGGCCCATCACCACCGTGTaGTGCTTCATGCCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: SVALELPIPLLDVPFKRWPITTV*CFMPPR
Trigger: CCTTGGGGGCATGAAGCACAACACGGTGGTGATGGG...CCATCTTTTAAAGGGCACATCTAGCAATGGAATTGGAAGTTCTAGAGCCACACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CAA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCCCATCACCACCGTGTaGTGCTTCATGCCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: FSVMTADQMGALLHRYLRPITTV*CFMPPR
Trigger: CCTTGGGGGCATGAAGCACAACACGGTGGTGATGGG...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACCCCATCACCACCGTGTaGTGCTTCATGCCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYPITTV*CFMPPR
Trigger: CCTTGGGGGCATGAAGCACAACACGGTGGTGATGGG...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGGCGGGCATCTTCGCTTaGACGCCAGCCATTAGGCCA +
Preference number: 5 (lower is better)
Translates to: AFSVMTADQMGALLHRYLAGIFA*TPAIRP
Trigger: TGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCGC...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACAAGATGGGCAGCAGTaGTCACTCGAACTGTGCCAA +
Preference number: 5 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQAQDGQQ*SLELCQ
Trigger: TTGGCACAGTTCGAGTGACAACTGCTGCCCATCTTG...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CAA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGGTTGCCCTCAGAAAATaGCTCCACATTGCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARVALRK*LHIAGK
Trigger: TTTCCCAGCAATGTGGAGCAATTTTCTGAGGGCAAC...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CAA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGGTTGCCCTCAGAAAATaGCTCCACATTGCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKVALRK*LHIAGK
Trigger: TTTCCCAGCAATGTGGAGCAATTTTCTGAGGGCAAC...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CAA 90 bp TTGTTAGCATGTTTAGGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAAGTTGCCCTCAGAAAATaGCTCCACATTGCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: LLACLGGTRIGGILGPQEVALRK*LHIAGK
Trigger: TTTCCCAGCAATGTGGAGCAATTTTCTGAGGGCAAC...TTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCCTAAACATGCTAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGCACTTTCGCCACACCTaGTGCTGTTTCAGTAGGAAT +
Preference number: 5 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARHFRHT*CCFSRN
Trigger: ATTCCTACTGAAACAGCACAAGGTGTGGCGAAAGTG...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGCACTTTCGCCACACCTaGTGCTGTTTCAGTAGGAAT +
Preference number: 5 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKHFRHT*CCFSRN
Trigger: ATTCCTACTGAAACAGCACAAGGTGTGGCGAAAGTG...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCAGAGCATCTGGGACCTTaGTTCCATCATCAAAGTGCG +
Preference number: 5 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSEHLGP*FHHQSA
Trigger: CGCACTTTGATGATGGAACAAAGGTCCCAGATGCTC...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCTGTCTCGCTCTGTTTaGGATAGCCGCATGTGCCGG +
Preference number: 5 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEALSRSV*DSRMCR
Trigger: CCGGCACATGCGGCTATCCAAAACAGAGCGAGACAG...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTCTGTCTCGCTCTGTTTaGGATAGCCGCATGTGCCGG +
Preference number: 5 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASLSRSV*DSRMCR
Trigger: CCGGCACATGCGGCTATCCAAAACAGAGCGAGACAG...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTCTGTCTCGCTCTGTTTaGGATAGCCGCATGTGCCGG +
Preference number: 5 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVLSRSV*DSRMCR
Trigger: CCGGCACATGCGGCTATCCAAAACAGAGCGAGACAG...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCTCGGTCTTTCACCAATaGTGCCTCTCTGTCTCGCTC +
Preference number: 5 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFSVFHQ*CLSVSL
Trigger: GAGCGAGACAGAGAGGCACAATTGGTGAAAGACCGA...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCTCGGTCTTTCACCAATaGTGCCTCTCTGTCTCGCTC +
Preference number: 5 (lower is better)
Translates to: SSSEPMLVNRSIEFRSFTSVFHQ*CLSVSL
Trigger: GAGCGAGACAGAGAGGCACAATTGGTGAAAGACCGA...GGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTGATGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGTCGGTCTTTCACCAATaGTGCCTCTCTGTCTCGCTC +
Preference number: 5 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSESVFHQ*CLSVSL
Trigger: GAGCGAGACAGAGAGGCACAATTGGTGAAAGACCGA...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCGGGATGCCATGTACTaGTCTTTTGTCCAAGTCATG +
Preference number: 5 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGRDAMY*SFVQVM
Trigger: CATGACTTGGACAAAAGACAAGTACATGGCATCCCG...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGTGCATCCGCCTCACATaGGACTGGTCCGGACGCATG +
Preference number: 5 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVECIRLT*DWSGRM
Trigger: CATGCGTCCGGACCAGTCCAATGTGAGGCGGATGCA...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGCTGCTCAGACGTGGCTaGAAAGACTTGAGCATTGTT +
Preference number: 5 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARLLRRG*KDLSIV
Trigger: AACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAG...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGGGGGAGAAGAACCTGTaGATTAATGTGCACCATGAC +
Preference number: 5 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKGEKNL*INVHHD
Trigger: GTCATGGTGCACATTAATCAACAGGTTCTTCTCCCC...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CAA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGAGCCGCTCAGTAACGTaGGCACTAAAGAAAGAGTGT +
Preference number: 5 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARSRSVT*ALKKEC
Trigger: ACACTCTTTCTTTAGTGCCAACGTTACTGAGCGGCT...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CAA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGAACTGAAGCCATCTaGGTGGTGGTTTCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQARTEAI*VVVSGG
Trigger: TCCTCCAGAAACCACCACCAAGATGGCTTCAGTTCG...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558667.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCAGCCACCCGGTGTTTTaGATGTCGACAATCCACTTG +
Preference number: 5 (lower is better)
Translates to: VGSLGHRNLRQRKIYRVISHPVF*MSTIHL
Trigger: CAAGTGGATTGTCGACATCAAAAACACCGGGTGGCT...GATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676379.1
CDS TCA 90 bp GAGCTTTCTTATGTCCGTCGTCTAACAGTTGGCTGTGTTCCCCTGTaGTGGAGTTCTGACTCAGGTCTGGTTCATCTGAATCCTGAATCC +
Preference number: 5 (lower is better)
Translates to: ELSYVRRLTVGCVPL*WSSDSGLVHLNPES
Trigger: GGATTCAGGATTCAGATGAACCAGACCTGAGTCAGAACTCCATCACAGGGGAACACAGCCAACTGTTAGACGACGGACATAAGAAAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290209.9
CDS TCA 90 bp TGTCTGACAAACCTGGAATGTCATCGATCTTTGTCGGTGTCACCATaGACCGAACTGAAGCCATCTTGGTGGTGGTTTCTGGAGGATGCA +
Preference number: 5 (lower is better)
Translates to: CLTNLECHRSLSVSP*TELKPSWWWFLEDA
Trigger: TGCATCCTCCAGAAACCACCACCAAGATGGCTTCAGTTCGGTTCATGGTGACACCGACAAAGATCGATGACATTCCAGGTTTGTCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558667.5
ENST00000559236.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
ENST00000675289.1
ENST00000676379.1
CDS-3UTR CAA 90 bp CGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCATCGATGGGACTGTCATGTaGTTAATTTCCTTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: RSVLDSRMCRSIWDLCSIDGTVM*LISLVL
Trigger: TAAGACCAAGGAAATTAACAACATGACAGTCCCATC...GATGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCACAGCATCACCGAACTaGTCTCTGAGAACAACCCCT +
Preference number: 5 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFTASPN*SLRTTP
Trigger: AGGGGTTGTTCTCAGAGACAAGTTCGGTGATGCTGT...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGTTAGCATGTTTAGGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAAGGTATGATGTTATCCTaGGCAATAGCTTGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: LLACLGGTRIGGILGPQEGMMLS*AIACSS
Trigger: GCTGCTACAAGCTATTGCCAAGGATAACATCATACC...TTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCCTAAACATGCTAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTGGTTCCCCATTGGCTTaGCTGTGGCCAAAAACCCTC +
Preference number: 5 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEAGSPLA*LWPKTL
Trigger: GAGGGTTTTTGGCCACAGCAAAGCCAATGGGGAACC...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGGGTTCCCCATTGGCTTaGCTGTGGCCAAAAACCCTC +
Preference number: 5 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVGSPLA*LWPKTL
Trigger: GAGGGTTTTTGGCCACAGCAAAGCCAATGGGGAACC...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGGTTCCCCATTGGCTTaGCTGTGGCCAAAAACCCTC +
Preference number: 5 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDGSPLA*LWPKTL
Trigger: GAGGGTTTTTGGCCACAGCAAAGCCAATGGGGAACC...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAACAGGTAGGTTCCCCATaGGCTTTGCTGTGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQQVGSP*ALLWPK
Trigger: TTTTGGCCACAGCAAAGCCAATGGGGAACCTACCTG...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAAACATGGAAAGAATaGGGGCCACAAGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIKTWKE*GPQDPG
Trigger: CCCTGGATCTTGTGGCCCCAATTCTTTCCATGTTTT...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CCTTCTCCTGATAGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAAAAACATGGAAAGAATaGGGGCCACAAGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: PSPDRFLSLRPHQSQCWSKTWKE*GPQDPG
Trigger: CCCTGGATCTTGTGGCCCCAATTCTTTCCATGTTTT...TGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCTATCAGGAGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAATCGGGGTCTCCAGTaGGGTGTTCGAAGTAATGTT +
Preference number: 5 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLINRGLQ*GVRSNV
Trigger: AACATTACTTCGAACACCCAACTGGAGACCCCGATT...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGAGACCTTTTCCTGCTTaGAGCTGTGAGGCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSERPFPA*SCEAKV
Trigger: CACCTTTGCCTCACAGCTCAAAGCAGGAAAAGGTCT...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CTCCAACCACAAACAGCACTTCTAAAACTAACTTTACTTTCTGCCCATAATTTGATGCCCTCTCTCAGCTaGGCGGCCACCACCAGCTGG +
Preference number: 5 (lower is better)
Translates to: LQPQTALLKLTLLSAHNLMPSLS*AATTSW
Trigger: CCAGCTGGTGGTGGCCGCCAAGCTGAGAGAGGGCAT...CAAATTATGGGCAGAAAGTAAAGTTAGTTTTAGAAGTGCTGTTTGTGGTTGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCACAAGATGGGCAGCAGTaGTCACTCGAACTGTGCCAA +
Preference number: 5 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSQDGQQ*SLELCQ
Trigger: TTGGCACAGTTCGAGTGACAACTGCTGCCCATCTTG...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CAA 90 bp TGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTCTGTCTCCAAGATGGGCAGCAGTaGTCACTCGAACTGTGCCAA +
Preference number: 5 (lower is better)
Translates to: WSIVALSFGLSPIVPLCLQDGQQ*SLELCQ
Trigger: TTGGCACAGTTCGAGTGACAACTGCTGCCCATCTTG...GAGACAGAGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559523.5
CDS-3UTR CAA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTGAAAATTGCTCCACATaGCTGGGAAAGAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGENCST*LGKKEM
Trigger: CATCTCCTTCTTTCCCAGCAATGTGGAGCAATTTTC...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CAA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCGTTGCCCTCAGAAAATaGCTCCACATTGCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIVALRK*LHIAGK
Trigger: TTTCCCAGCAATGTGGAGCAATTTTCTGAGGGCAAC...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CAA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCAGAGCATCTGGGACCTTaGTTCCATCATCAAAGTGCG +
Preference number: 5 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQAEHLGP*FHHQSA
Trigger: CGCACTTTGATGATGGAACAAAGGTCCCAGATGCTC...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCGAGCATCTGGGACCTTaGTTCCATCATCAAAGTGCG +
Preference number: 5 (lower is better)
Translates to: EPMLVNRSIEFRSFTNCAEHLGP*FHHQSA
Trigger: CGCACTTTGATGATGGAACAAAGGTCCCAGATGCTC...GGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCGAGCATCTGGGACCTTaGTTCCATCATCAAAGTGCG +
Preference number: 5 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFEHLGP*FHHQSA
Trigger: CGCACTTTGATGATGGAACAAAGGTCCCAGATGCTC...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGCTGTCTCGCTCTGTTTaGGATAGCCGCATGTGCCGG +
Preference number: 5 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVELSRSV*DSRMCR
Trigger: CCGGCACATGCGGCTATCCAAAACAGAGCGAGACAG...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGCTGTCTCGCTCTGTTTaGGATAGCCGCATGTGCCGG +
Preference number: 5 (lower is better)
Translates to: AFSVMTADQMGALLHRYLLSRSV*DSRMCR
Trigger: CCGGCACATGCGGCTATCCAAAACAGAGCGAGACAG...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTGTCTCGCTCTGTTTaGGATAGCCGCATGTGCCGG +
Preference number: 5 (lower is better)
Translates to: FSVMTADQMGALLHRYLRLSRSV*DSRMCR
Trigger: CCGGCACATGCGGCTATCCAAAACAGAGCGAGACAG...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGTCGGTCTTTCACCAATaGTGCCTCTCTGTCTCGCTC +
Preference number: 5 (lower is better)
Translates to: PLTAQTWLERLEHCSDVESVFHQ*CLSVSL
Trigger: GAGCGAGACAGAGAGGCACAATTGGTGAAAGACCGA...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAATCGGTCTTTCACCAATaGTGCCTCTCTGTCTCGCTC +
Preference number: 5 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQSVFHQ*CLSVSL
Trigger: GAGCGAGACAGAGAGGCACAATTGGTGAAAGACCGA...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTGGTCAATCGTAGCATaGAGTTTCGGTCTTTCACCA +
Preference number: 5 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARWSIVA*SFGLSP
Trigger: TGGTGAAAGACCGAAACTCAATGCTACGATTGACCA...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGTGGTCAATCGTAGCATaGAGTTTCGGTCTTTCACCA +
Preference number: 5 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKWSIVA*SFGLSP
Trigger: TGGTGAAAGACCGAAACTCAATGCTACGATTGACCA...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGCCATGTACTTGTCTTTaGTCCAAGTCATGTGCACCT +
Preference number: 5 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKPCTCL*SKSCAP
Trigger: AGGTGCACATGACTTGGACAAAAGACAAGTACATGG...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGATGCCCCATGTACTTGTCTTTaGTCCAAGTCATGTGCACCT +
Preference number: 5 (lower is better)
Translates to: LSRSWNPSIDFAFCPRDAPCTCL*SKSCAP
Trigger: AGGTGCACATGACTTGGACAAAAGACAAGTACATGG...GGCATCCCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCCGGGATGCCATGTACTaGTCTTTTGTCCAAGTCATG +
Preference number: 5 (lower is better)
Translates to: VGSLGHRNLRQRKIYRVIRDAMY*SFVQVM
Trigger: CATGACTTGGACAAAAGACAAGTACATGGCATCCCG...GATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACCTGGAATCCTTCCATaGACTTCGCTTTTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQAPGILP*TSLFVP
Trigger: GGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGG...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCACCTGGAATCCTTCCATaGACTTCGCTTTTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: TADQMGALLHRYLRLSSSPGILP*TSLFVP
Trigger: GGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGG...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ACCAGTTTTCCATGTAACAGTGATTTTGTGTTTCGGGCTGAAGCAGTGGTTATATGCATCCGCCTCACATaGGACTGGTCCGGACGCATG +
Preference number: 5 (lower is better)
Translates to: TSFPCNSDFVFRAEAVVICIRLT*DWSGRM
Trigger: CATGCGTCCGGACCAGTCCAATGTGAGGCGGATGCA...TATAACCACTGCTTCAGCCCGAAACACAAAATCACTGTTACATGGAAAACTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGCTTTTACACAGGTACTaGAGGCTCAGCTCATCAAGA +
Preference number: 5 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKLLHRY*RLSSSR
Trigger: TCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGTTAGCATGTTTAGGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAACGTGGCTTGAAAGACTaGAGCATTGTTCTGATGTTG +
Preference number: 5 (lower is better)
Translates to: LLACLGGTRIGGILGPQERGLKD*SIVLML
Trigger: CAACATCAGAACAATGCTCAAGTCTTTCAAGCCACG...TTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCCTAAACATGCTAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CAA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGCGTGGCTTGAAAGACTaGAGCATTGTTCTGATGTTG +
Preference number: 5 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARRGLKD*SIVLML
Trigger: CAACATCAGAACAATGCTCAAGTCTTTCAAGCCACG...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCGTGGCTTGAAAGACTaGAGCATTGTTCTGATGTTG +
Preference number: 5 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGRGLKD*SIVLML
Trigger: CAACATCAGAACAATGCTCAAGTCTTTCAAGCCACG...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CTCCTGATAGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGCTGCTCAGACGTGGCTaGAAAGACTTGAGCATTGTT +
Preference number: 5 (lower is better)
Translates to: LLIGFCLFVLIRANAGQSLLRRG*KDLSIV
Trigger: AACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAG...CGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCTATCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GACTGGTCCGGACGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTAATTCTAATTTGCCTTaGACTGCTCAGACGTGGCTT +
Preference number: 5 (lower is better)
Translates to: DWSGRMLSRSWNPSIDFANSNLP*TAQTWL
Trigger: AAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAATT...AGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCGTCCGGACCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CCGGAGCATCTGGGACCTTTGTTCCATCATCAAAGTGCGCTCGTAAGTATATGCTGTTTGCATCTTGGCTaGCCGAGGATAATAGGTCCA +
Preference number: 5 (lower is better)
Translates to: PEHLGPLFHHQSALVSICCLHLG*PRIIGP
Trigger: TGGACCTATTATCCTCGGCAAGCCAAGATGCAAACA...GCATATACTTACGAGCGCACTTTGATGATGGAACAAAGGTCCCAGATGCTCCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATAAGATCCTATCCGCTTaGCCATCCTCAGTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYKILSA*PSSVGL
Trigger: CAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTT...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CAA 90 bp TCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCGTCCCCCATGTAACAGTGATTTaGTGTTTCGGGCTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: SLGHRNLRQRKIYRVIVPHVTVI*CFGLKQ
Trigger: CTGCTTCAGCCCGAAACACAAAATCACTGTTACATG...GGGGACGATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp CCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTCGAACTGAAGCCATCTaGGTGGTGGTTTCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: PMLVNRSIEFRSFTNCASRTEAI*VVVSGG
Trigger: TCCTCCAGAAACCACCACCAAGATGGCTTCAGTTCG...AGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGCGAACTGAAGCCATCTaGGTGGTGGTTTCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: PLTAQTWLERLEHCSDVERTEAI*VVVSGG
Trigger: TCCTCCAGAAACCACCACCAAGATGGCTTCAGTTCG...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAGCCACCCGGTGTTTTaGATGTCGACAATCCACTTG +
Preference number: 5 (lower is better)
Translates to: SSSEPMLVNRSIEFRSFTSHPVF*MSTIHL
Trigger: CAAGTGGATTGTCGACATCAAAAACACCGGGTGGCT...GGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTGATGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCGCAGTCAACATTGTCTaGGTGGGCTTCTTTTTCCCT +
Preference number: 5 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIAVNIV*VGFFFP
Trigger: AGGGAAAAAGAAGCCCACCAAGACAATGTTGACTGC...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560164.5
CDS TCA 90 bp TGTCTGACAAACCTGGAATGTCATCGATCTTTGTCGGTGTCACCATaGACCGAACTGAAGCCATCTTGGTGGTGGTTTCTTGCGAAGAGA +
Preference number: 5 (lower is better)
Translates to: CLTNLECHRSLSVSP*TELKPSWWWFLAKR
Trigger: TCTCTTCGCAAGAAACCACCACCAAGATGGCTTCAGTTCGGTTCATGGTGACACCGACAAAGATCGATGACATTCCAGGTTTGTCAGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561120.5
CDS GCA 90 bp CTCCACATTGCTGGGAAAGAAGGAGATGTTTTTAGCCACCAGCAGTaGAAGATGGGCAGCAGTTGTCACTCGAACTGTGCCAATAAAAGT +
Preference number: 5 (lower is better)
Translates to: LHIAGKEGDVFSHQQ*KMGSSCHSNCANKS
Trigger: ACTTTTATTGGCACAGTTCGAGTGACAACTGCTGCCCATCTTGCACTGCTGGTGGCTAAAAACATCTCCTTCTTTCCCAGCAATGTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558589.5
ENST00000558667.5
ENST00000558950.1
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
ENST00000676379.1
CDS-3UTR CAA 90 bp CGCTCTGTTTTGGATAGCCGCATGTGCCGGAGCATCTGGGACCTTTGTTCCATCATGTTGTTAATTTCCTaGGTCTTAGAGCAAACGTCA +
Preference number: 5 (lower is better)
Translates to: RSVLDSRMCRSIWDLCSIMLLIS*VLEQTS
Trigger: TGACGTTTGCTCTAAGACCAAGGAAATTAACAACAT...GATGGAACAAAGGTCCCAGATGCTCCGGCACATGCGGCTATCCAAAACAGAGCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTAGAATCCCCATAACTTaGATGGGACTGTCATGTTGT +
Preference number: 5 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGRIPIT*MGLSCC
Trigger: ACAACATGACAGTCCCATCAAAGTTATGGGGATTCT...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGTTAGCATGTTTAGGGGGAACGAGGATTGGTGGGATCCTTGGGCCACAGGAAAAGACATCAGAAGATTaGGCTGAAGGCTTTTCGATG +
Preference number: 5 (lower is better)
Translates to: LLACLGGTRIGGILGPQEKTSED*AEGFSM
Trigger: CATCGAAAAGCCTTCAGCCAAATCTTCTGATGTCTT...TTCCTGTGGCCCAAGGATCCCACCAATCCTCGTTCCCCCTAAACATGCTAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp CGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGAAGACATCAGAAGATTaGGCTGAAGGCTTTTCGATG +
Preference number: 5 (lower is better)
Translates to: RMLSRSWNPSIDFAFCPRKTSED*AEGFSM
Trigger: CATCGAAAAGCCTTCAGCCAAATCTTCTGATGTCTT...CCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGACAGCATCACCGAACTaGTCTCTGAGAACAACCCCT +
Preference number: 5 (lower is better)
Translates to: PLTAQTWLERLEHCSDVETASPN*SLRTTP
Trigger: AGGGGTTGTTCTCAGAGACAAGTTCGGTGATGCTGT...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCGGTATGATGTTATCCTaGGCAATAGCTTGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIGMMLS*AIACSS
Trigger: GCTGCTACAAGCTATTGCCAAGGATAACATCATACC...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCAGGTATGATGTTATCCTaGGCAATAGCTTGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSGMMLS*AIACSS
Trigger: GCTGCTACAAGCTATTGCCAAGGATAACATCATACC...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACGGTTCCCCATTGGCTTaGCTGTGGCCAAAAACCCTC +
Preference number: 5 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYGSPLA*LWPKTL
Trigger: GAGGGTTTTTGGCCACAGCAAAGCCAATGGGGAACC...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTCAGGTAGGTTCCCCATaGGCTTTGCTGTGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVQVGSP*ALLWPK
Trigger: TTTTGGCCACAGCAAAGCCAATGGGGAACCTACCTG...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATCAGGTAGGTTCCCCATaGGCTTTGCTGTGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYQVGSP*ALLWPK
Trigger: TTTTGGCCACAGCAAAGCCAATGGGGAACCTACCTG...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGCAGGTAGGTTCCCCATaGGCTTTGCTGTGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVQVGSP*ALLWPK
Trigger: TTTTGGCCACAGCAAAGCCAATGGGGAACCTACCTG...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAATCGGGGTCTCCAGTaGGGTGTTCGAAGTAATGTT +
Preference number: 5 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFNRGLQ*GVRSNV
Trigger: AACATTACTTCGAACACCCAACTGGAGACCCCGATT...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGGAGGCGAGGATGCTaGACATGTAAGTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: TADQMGALLHRYLRLSSSRRRGC*TCKSSS
Trigger: AGATGAAGACTTACATGTCAAGCATCCTCGCCTCCT...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAAGACCTTTTCCTGCTTaGAGCTGTGAGGCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSRPFPA*SCEAKV
Trigger: CACCTTTGCCTCACAGCTCAAAGCAGGAAAAGGTCT...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTCTGTCTAGACCTTTTCCTGCTTaGAGCTGTGAGGCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: LVNRSIEFRSFTNCASLSRPFPA*SCEAKV
Trigger: CACCTTTGCCTCACAGCTCAAAGCAGGAAAAGGTCT...AGACAGAGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTCTGTCTCAGACCTTTTCCTGCTTaGAGCTGTGAGGCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: WSIVALSFGLSPIVPLCLRPFPA*SCEAKV
Trigger: CACCTTTGCCTCACAGCTCAAAGCAGGAAAAGGTCT...GAGACAGAGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATCCCATCACCACCGTGTaGTGCTTCATGCCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHPITTV*CFMPPR
Trigger: CCTTGGGGGCATGAAGCACAACACGGTGGTGATGGG...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGCAAGATGGGCAGCAGTaGTCACTCGAACTGTGCCAA +
Preference number: 5 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVQDGQQ*SLELCQ
Trigger: TTGGCACAGTTCGAGTGACAACTGCTGCCCATCTTG...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTCAAGATGGGCAGCAGTaGTCACTCGAACTGTGCCAA +
Preference number: 5 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVQDGQQ*SLELCQ
Trigger: TTGGCACAGTTCGAGTGACAACTGCTGCCCATCTTG...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CAA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCAGAAAATTGCTCCACATaGCTGGGAAAGAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSENCST*LGKKEM
Trigger: CATCTCCTTCTTTCCCAGCAATGTGGAGCAATTTTC...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CAA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCGTTGCCCTCAGAAAATaGCTCCACATTGCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFVALRK*LHIAGK
Trigger: TTTCCCAGCAATGTGGAGCAATTTTCTGAGGGCAAC...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CAA 90 bp GAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCGTTGCCCTCAGAAAATaGCTCCACATTGCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: EPMLVNRSIEFRSFTNCAVALRK*LHIAGK
Trigger: TTTCCCAGCAATGTGGAGCAATTTTCTGAGGGCAAC...GGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559523.5
CDS-3UTR CAA 90 bp TCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCCACCACACATCAATGTaGCCCTCAGAAAATTGCTCC +
Preference number: 5 (lower is better)
Translates to: SSSEPMLVNRSIEFRSFTHHTSM*PSENCS
Trigger: GGAGCAATTTTCTGAGGGCAACATTGATGTGTGGTG...GGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTGATGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCACACTTTCGCCACACCTaGTGCTGTTTCAGTAGGAAT +
Preference number: 5 (lower is better)
Translates to: TADQMGALLHRYLRLSSSHFRHT*CCFSRN
Trigger: ATTCCTACTGAAACAGCACAAGGTGTGGCGAAAGTG...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTCGGTCTTTCACCAATaGTGCCTCTCTGTCTCGCTC +
Preference number: 5 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSSVFHQ*CLSVSL
Trigger: GAGCGAGACAGAGAGGCACAATTGGTGAAAGACCGA...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTTCGGTCTTTCACCAATaGTGCCTCTCTGTCTCGCTC +
Preference number: 5 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASSVFHQ*CLSVSL
Trigger: GAGCGAGACAGAGAGGCACAATTGGTGAAAGACCGA...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCACCATGTACTTGTCTTTaGTCCAAGTCATGTGCACCT +
Preference number: 5 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSPCTCL*SKSCAP
Trigger: AGGTGCACATGACTTGGACAAAAGACAAGTACATGG...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTGGGATCCTTGGGCCACAGGAATCTGAGGCAACGGAAGATATATAGAGTGATCCCATGTACTTGTCTTTaGTCCAAGTCATGTGCACCT +
Preference number: 5 (lower is better)
Translates to: VGSLGHRNLRQRKIYRVIPCTCL*SKSCAP
Trigger: AGGTGCACATGACTTGGACAAAAGACAAGTACATGG...GATCACTCTATATATCTTCCGTTGCCTCAGATTCCTGTGGCCCAAGGATCCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGGATGCCATGTACTaGTCTTTTGTCCAAGTCATG +
Preference number: 5 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQARDAMY*SFVQVM
Trigger: CATGACTTGGACAAAAGACAAGTACATGGCATCCCG...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTCTGTCTCCCTGGAATCCTTCCATaGACTTCGCTTTTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: WSIVALSFGLSPIVPLCLPGILP*TSLFVP
Trigger: GGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGG...GAGACAGAGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAACCTGGAATCCTTCCATaGACTTCGCTTTTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQPGILP*TSLFVP
Trigger: GGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGG...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCCTTTTACACAGGTACTaGAGGCTCAGCTCATCAAGA +
Preference number: 5 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLILLHRY*RLSSSR
Trigger: TCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CTCCTGATAGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGCGTGGCTTGAAAGACTaGAGCATTGTTCTGATGTTG +
Preference number: 5 (lower is better)
Translates to: LLIGFCLFVLIRANAGQSRGLKD*SIVLML
Trigger: CAACATCAGAACAATGCTCAAGTCTTTCAAGCCACG...CGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCTATCAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGCTGCTCAGACGTGGCTaGAAAGACTTGAGCATTGTT +
Preference number: 5 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSELLRRG*KDLSIV
Trigger: AACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAG...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCCTGCTCAGACGTGGCTaGAAAGACTTGAGCATTGTT +
Preference number: 5 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFLLRRG*KDLSIV
Trigger: AACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAG...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAATTCTAATTTGCCTTaGACTGCTCAGACGTGGCTT +
Preference number: 5 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKNSNLP*TAQTWL
Trigger: AAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAATT...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCTGTTTGCATCTTGGCTaGCCGAGGATAATAGGTCCA +
Preference number: 5 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFCLHLG*PRIIGP
Trigger: TGGACCTATTATCCTCGGCAAGCCAAGATGCAAACA...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATGATACTGGATCCTGGTaGGGCACAGTGGCTCACGCC +
Preference number: 5 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHDTGSW*GTVAHA
Trigger: GGCGTGAGCCACTGTGCCCAACCAGGATCCAGTATC...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CAA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGCGAACTGAAGCCATCTaGGTGGTGGTTTCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVRTEAI*VVVSGG
Trigger: TCCTCCAGAAACCACCACCAAGATGGCTTCAGTTCG...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558667.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGCGAACTGAAGCCATCTaGGTGGTGGTTTCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVRTEAI*VVVSGG
Trigger: TCCTCCAGAAACCACCACCAAGATGGCTTCAGTTCG...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTATGTCGACAATCCACTaGGGTCTGGTGGGAAAGGTG +
Preference number: 5 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASMSTIH*GLVGKV
Trigger: CACCTTTCCCACCAGACCCAAGTGGATTGTCGACAT...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS TCA 90 bp ACCTGGAATGTCATCGATCTTTGTCGGTGTCACCATGAACCGAACTaGAGCCATCTTGGTGGTGGTTTCTGGAGGATGCATTTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: TWNVIDLCRCHHEPN*SHLGGGFWRMHFVL
Trigger: AAGAACAAAATGCATCCTCCAGAAACCACCACCAAGATGGCTTCAGTTCGGTTCATGGTGACACCGACAAAGATCGATGACATTCCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558667.5
ENST00000559236.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
ENST00000675289.1
ENST00000676379.1
CDS TCA 90 bp GAGCTTTCTTATGTCCGTCGTCTAACAGTTGGCTGTGTTCCCCTGTaGTGGAGTTCTGACTCAGGTATTACATTTCCTGGAGTGATCACA +
Preference number: 5 (lower is better)
Translates to: ELSYVRRLTVGCVPL*WSSDSGITFPGVIT
Trigger: TGTGATCACTCCAGGAAATGTAATACCTGAGTCAGAACTCCATCACAGGGGAACACAGCCAACTGTTAGACGACGGACATAAGAAAGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560164.5
CDS TCA 90 bp TGTCTGACAAACCTGGAATGTCATCGATCTTTGTCGGTGTCACCATaGACCGAACTGAAGCCATCTTGGTGGTGGTTTACTACTGAGAGA +
Preference number: 5 (lower is better)
Translates to: CLTNLECHRSLSVSP*TELKPSWWWFTTER
Trigger: TCTCTCAGTAGTAAACCACCACCAAGATGGCTTCAGTTCGGTTCATGGTGACACCGACAAAGATCGATGACATTCCAGGTTTGTCAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558589.5
CDS CCA 90 bp TTGCTGGGAAAGAAGGAGATGTTTTTAGCCACCAGCAGTGCAAGATaGGCAGCAGTTGTCACTCGAACTGTGCCAATAAAAGTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: LLGKKEMFLATSSAR*AAVVTRTVPIKVFQ
Trigger: TTGGAAGACTTTTATTGGCACAGTTCGAGTGACAACTGCTGCCCATCTTGCACTGCTGGTGGCTAAAAACATCTCCTTCTTTCCCAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558589.5
ENST00000558667.5
ENST00000558950.1
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
ENST00000676379.1
CDS-3UTR CAA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGGATGGGACTGTCATGTaGTTAATTTCCTTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKDGTVM*LISLVL
Trigger: TAAGACCAAGGAAATTAACAACATGACAGTCCCATC...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTGATGGGACTGTCATGTaGTTAATTTCCTTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGDGTVM*LISLVL
Trigger: TAAGACCAAGGAAATTAACAACATGACAGTCCCATC...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCAAGAATCCCCATAACTTaGATGGGACTGTCATGTTGT +
Preference number: 5 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSRIPIT*MGLSCC
Trigger: ACAACATGACAGTCCCATCAAAGTTATGGGGATTCT...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CCGGAGCATCTGGGACCTTTGTTCCATCATCAAAGTGCGCTCGTAAGTATATGCAGAATCCCCATAACTTaGATGGGACTGTCATGTTGT +
Preference number: 5 (lower is better)
Translates to: PEHLGPLFHHQSALVSICRIPIT*MGLSCC
Trigger: ACAACATGACAGTCCCATCAAAGTTATGGGGATTCT...GCATATACTTACGAGCGCACTTTGATGATGGAACAAAGGTCCCAGATGCTCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTGGTGGCATTGAAAAATaGACTCGAGTTACAGAAGAA +
Preference number: 5 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGGGIEK*TRVTEE
Trigger: TTCTTCTGTAACTCGAGTCAATTTTTCAATGCCACC...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGACATCAGAAGATTaGGCTGAAGGCTTTTCGATG +
Preference number: 5 (lower is better)
Translates to: DCRSDGSSFTQVLEAQLIKTSED*AEGFSM
Trigger: CATCGAAAAGCCTTCAGCCAAATCTTCTGATGTCTT...GATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTACAGCATCACCGAACTaGTCTCTGAGAACAACCCCT +
Preference number: 5 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASTASPN*SLRTTP
Trigger: AGGGGTTGTTCTCAGAGACAAGTTCGGTGATGCTGT...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTACAGCATCACCGAACTaGTCTCTGAGAACAACCCCT +
Preference number: 5 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVTASPN*SLRTTP
Trigger: AGGGGTTGTTCTCAGAGACAAGTTCGGTGATGCTGT...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGACAGCATCACCGAACTaGTCTCTGAGAACAACCCCT +
Preference number: 5 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVTASPN*SLRTTP
Trigger: AGGGGTTGTTCTCAGAGACAAGTTCGGTGATGCTGT...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACAACAGCATCACCGAACTaGTCTCTGAGAACAACCCCT +
Preference number: 5 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTTASPN*SLRTTP
Trigger: AGGGGTTGTTCTCAGAGACAAGTTCGGTGATGCTGT...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCAGGTATGATGTTATCCTaGGCAATAGCTTGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQAGMMLS*AIACSS
Trigger: GCTGCTACAAGCTATTGCCAAGGATAACATCATACC...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCAGGTAGGTTCCCCATaGGCTTTGCTGTGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: FSVMTADQMGALLHRYLRQVGSP*ALLWPK
Trigger: TTTTGGCCACAGCAAAGCCAATGGGGAACCTACCTG...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAAATCGGGGTCTCCAGTaGGGTGTTCGAAGTAATGTT +
Preference number: 5 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSNRGLQ*GVRSNV
Trigger: AACATTACTTCGAACACCCAACTGGAGACCCCGATT...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTAATCGGGGTCTCCAGTaGGGTGTTCGAAGTAATGTT +
Preference number: 5 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGNRGLQ*GVRSNV
Trigger: AACATTACTTCGAACACCCAACTGGAGACCCCGATT...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAAGGAGGCGAGGATGCTaGACATGTAAGTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQRRRGC*TCKSSS
Trigger: AGATGAAGACTTACATGTCAAGCATCCTCGCCTCCT...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTAGGAGGCGAGGATGCTaGACATGTAAGTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGRRRGC*TCKSSS
Trigger: AGATGAAGACTTACATGTCAAGCATCCTCGCCTCCT...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAAGGAGGCGAGGATGCTaGACATGTAAGTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSRRRGC*TCKSSS
Trigger: AGATGAAGACTTACATGTCAAGCATCCTCGCCTCCT...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAAGGAGGCGAGGATGCTaGACATGTAAGTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTRRRGC*TCKSSS
Trigger: AGATGAAGACTTACATGTCAAGCATCCTCGCCTCCT...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTAGACCTTTTCCTGCTTaGAGCTGTGAGGCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVRPFPA*SCEAKV
Trigger: CACCTTTGCCTCACAGCTCAAAGCAGGAAAAGGTCT...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTAGACCTTTTCCTGCTTaGAGCTGTGAGGCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVRPFPA*SCEAKV
Trigger: CACCTTTGCCTCACAGCTCAAAGCAGGAAAAGGTCT...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACAAGACCTTTTCCTGCTTaGAGCTGTGAGGCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTRPFPA*SCEAKV
Trigger: CACCTTTGCCTCACAGCTCAAAGCAGGAAAAGGTCT...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCAAGATGGGCAGCAGTaGTCACTCGAACTGTGCCAA +
Preference number: 5 (lower is better)
Translates to: FSVMTADQMGALLHRYLRQDGQQ*SLELCQ
Trigger: TTGGCACAGTTCGAGTGACAACTGCTGCCCATCTTG...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CAA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGCAAGATGGGCAGCAGTaGTCACTCGAACTGTGCCAA +
Preference number: 5 (lower is better)
Translates to: AFSVMTADQMGALLHRYLQDGQQ*SLELCQ
Trigger: TTGGCACAGTTCGAGTGACAACTGCTGCCCATCTTG...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CAA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGGAAAATTGCTCCACATaGCTGGGAAAGAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSEENCST*LGKKEM
Trigger: CATCTCCTTCTTTCCCAGCAATGTGGAGCAATTTTC...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CAA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACACACCACACATCAATGTaGCCCTCAGAAAATTGCTCC +
Preference number: 5 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTHHTSM*PSENCS
Trigger: GGAGCAATTTTCTGAGGGCAACATTGATGTGTGGTG...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCACACCACACATCAATGTaGCCCTCAGAAAATTGCTCC +
Preference number: 5 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSHHTSM*PSENCS
Trigger: GGAGCAATTTTCTGAGGGCAACATTGATGTGTGGTG...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGCACTTTCGCCACACCTaGTGCTGTTTCAGTAGGAAT +
Preference number: 5 (lower is better)
Translates to: PLTAQTWLERLEHCSDVEHFRHT*CCFSRN
Trigger: ATTCCTACTGAAACAGCACAAGGTGTGGCGAAAGTG...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTTTGTCCAAGTCATGTGCACCTTCTCCTGATAGGTTTCTGTCTCTTCGTCCTCCACTTTCGCCACACCTaGTGCTGTTTCAGTAGGAAT +
Preference number: 5 (lower is better)
Translates to: FCPSHVHLLLIGFCLFVLHFRHT*CCFSRN
Trigger: ATTCCTACTGAAACAGCACAAGGTGTGGCGAAAGTG...GAGGACGAAGAGACAGAAACCTATCAGGAGAAGGTGCACATGACTTGGACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACACACTTTCGCCACACCTaGTGCTGTTTCAGTAGGAAT +
Preference number: 5 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTHFRHT*CCFSRN
Trigger: ATTCCTACTGAAACAGCACAAGGTGTGGCGAAAGTG...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGGAGCATCTGGGACCTTaGTTCCATCATCAAAGTGCG +
Preference number: 5 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVEHLGP*FHHQSA
Trigger: CGCACTTTGATGATGGAACAAAGGTCCCAGATGCTC...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTGAGCATCTGGGACCTTaGTTCCATCATCAAAGTGCG +
Preference number: 5 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEAEHLGP*FHHQSA
Trigger: CGCACTTTGATGATGGAACAAAGGTCCCAGATGCTC...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACAGAGCATCTGGGACCTTaGTTCCATCATCAAAGTGCG +
Preference number: 5 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTEHLGP*FHHQSA
Trigger: CGCACTTTGATGATGGAACAAAGGTCCCAGATGCTC...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACTCGGTCTTTCACCAATaGTGCCTCTCTGTCTCGCTC +
Preference number: 5 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYSVFHQ*CLSVSL
Trigger: GAGCGAGACAGAGAGGCACAATTGGTGAAAGACCGA...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCATGGTCAATCGTAGCATaGAGTTTCGGTCTTTCACCA +
Preference number: 5 (lower is better)
Translates to: TADQMGALLHRYLRLSSSWSIVA*SFGLSP
Trigger: TGGTGAAAGACCGAAACTCAATGCTACGATTGACCA...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AAAAGACTTAAGATCCTATCCGCTTTGCCATCCTCAGTGGGCCTGGAGGTTGAATGGTCAATCGTAGCATaGAGTTTCGGTCTTTCACCA +
Preference number: 5 (lower is better)
Translates to: KRLKILSALPSSVGLEVEWSIVA*SFGLSP
Trigger: TGGTGAAAGACCGAAACTCAATGCTACGATTGACCA...TTCAACCTCCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTTAAGTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACCATGTACTTGTCTTTaGTCCAAGTCATGTGCACCT +
Preference number: 5 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQAPCTCL*SKSCAP
Trigger: AGGTGCACATGACTTGGACAAAAGACAAGTACATGG...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCGGGATGCCATGTACTaGTCTTTTGTCCAAGTCATG +
Preference number: 5 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGRDAMY*SFVQVM
Trigger: CATGACTTGGACAAAAGACAAGTACATGGCATCCCG...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCCTGGAATCCTTCCATaGACTTCGCTTTTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEAPGILP*TSLFVP
Trigger: GGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGG...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATCCTGGAATCCTTCCATaGACTTCGCTTTTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDPGILP*TSLFVP
Trigger: GGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGG...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTCCTGGAATCCTTCCATaGACTTCGCTTTTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVPGILP*TSLFVP
Trigger: GGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGG...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTTAACTATAACCTCGTaGAGTTTCACTGCTGTATGC +
Preference number: 5 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARLTITS*SFTAVC
Trigger: GCATACAGCAGTGAAACTCAACGAGGTTATAGTTAA...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTGGGAGTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGTTAACTATAACCTCGTaGAGTTTCACTGCTGTATGC +
Preference number: 5 (lower is better)
Translates to: VGVVVMSWHFHGGRRPFKLTITS*SFTAVC
Trigger: GCATACAGCAGTGAAACTCAACGAGGTTATAGTTAA...CTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCACTCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTTTGCTTCATGGGACTaGTTAACTATAACCTCGTTG +
Preference number: 5 (lower is better)
Translates to: SWHFHGGRRPFKKTGQARFASWD*LTITSL
Trigger: CAACGAGGTTATAGTTAACAAGTCCCATGAAGCAAA...CCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTTTTGCTTCATGGGACTaGTTAACTATAACCTCGTTG +
Preference number: 5 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGFASWD*LTITSL
Trigger: CAACGAGGTTATAGTTAACAAGTCCCATGAAGCAAA...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGCTTTTACACAGGTACTaGAGGCTCAGCTCATCAAGA +
Preference number: 5 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSELLHRY*RLSSSR
Trigger: TCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCCTTTTACACAGGTACTaGAGGCTCAGCTCATCAAGA +
Preference number: 5 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFLLHRY*RLSSSR
Trigger: TCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCACTGCTCAGACGTGGCTaGAAAGACTTGAGCATTGTT +
Preference number: 5 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSLLRRG*KDLSIV
Trigger: AACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAG...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGCTTGTTAATTCTAATTaGCCTTTGACTGCTCAGACG +
Preference number: 5 (lower is better)
Translates to: RMLSRSWNPSIDFAFCPRLVNSN*PLTAQT
Trigger: CGTCTGAGCAGTCAAAGGCAAATTAGAATTAACAAG...CCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCATGTTTGCATCTTGGCTaGCCGAGGATAATAGGTCCA +
Preference number: 5 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSCLHLG*PRIIGP
Trigger: TGGACCTATTATCCTCGGCAAGCCAAGATGCAAACA...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAGGATTGGTGGGATCCTaGGGCCACAGGAATCTGAGG +
Preference number: 5 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTGLVGS*GHRNLR
Trigger: CCTCAGATTCCTGTGGCCCAAGGATCCCACCAATCC...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CAA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACCGAACTGAAGCCATCTaGGTGGTGGTTTCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYRTEAI*VVVSGG
Trigger: TCCTCCAGAAACCACCACCAAGATGGCTTCAGTTCG...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558667.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTAGCCACCCGGTGTTTTaGATGTCGACAATCCACTTG +
Preference number: 5 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVSHPVF*MSTIHL
Trigger: CAAGTGGATTGTCGACATCAAAAACACCGGGTGGCT...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGAAACGTCAATGTGTCTaGATGAAAGGGTGCGGTTAC +
Preference number: 5 (lower is better)
Translates to: PLTAQTWLERLEHCSDVEKRQCV*MKGCGY
Trigger: GTAACCGCACCCTTTCATCAAGACACATTGACGTTT...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAAAACGTCAATGTGTCTaGATGAAAGGGTGCGGTTAC +
Preference number: 5 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTKRQCV*MKGCGY
Trigger: GTAACCGCACCCTTTCATCAAGACACATTGACGTTT...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCAGGTGGCATTGAAAAATaGACTCGAGTTACAGAAGAA +
Preference number: 5 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSGGIEK*TRVTEE
Trigger: TTCTTCTGTAACTCGAGTCAATTTTTCAATGCCACC...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TCTCCACCACTTCTACCTCCGCCTCAATGCGTAAGTGATATAGGAAGGTGGCTAGGTGGCATTGAAAAATaGACTCGAGTTACAGAAGAA +
Preference number: 5 (lower is better)
Translates to: SPPLLPPPQCVSDIGRWLGGIEK*TRVTEE
Trigger: TTCTTCTGTAACTCGAGTCAATTTTTCAATGCCACC...TAGCCACCTTCCTATATCACTTACGCATTGAGGCGGAGGTAGAAGTGGTGGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAAGACATCAGAAGATTaGGCTGAAGGCTTTTCGATG +
Preference number: 5 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFKTSED*AEGFSM
Trigger: CATCGAAAAGCCTTCAGCCAAATCTTCTGATGTCTT...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAAGACATCAGAAGATTaGGCTGAAGGCTTTTCGATG +
Preference number: 5 (lower is better)
Translates to: TADQMGALLHRYLRLSSSKTSED*AEGFSM
Trigger: CATCGAAAAGCCTTCAGCCAAATCTTCTGATGTCTT...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGACAGCATCACCGAACTaGTCTCTGAGAACAACCCCT +
Preference number: 5 (lower is better)
Translates to: FSVMTADQMGALLHRYLRTASPN*SLRTTP
Trigger: AGGGGTTGTTCTCAGAGACAAGTTCGGTGATGCTGT...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGGTATGATGTTATCCTaGGCAATAGCTTGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQGMMLS*AIACSS
Trigger: GCTGCTACAAGCTATTGCCAAGGATAACATCATACC...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGGTATGATGTTATCCTaGGCAATAGCTTGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSGMMLS*AIACSS
Trigger: GCTGCTACAAGCTATTGCCAAGGATAACATCATACC...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTGGTATGATGTTATCCTaGGCAATAGCTTGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGGMMLS*AIACSS
Trigger: GCTGCTACAAGCTATTGCCAAGGATAACATCATACC...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTAAAACATGGAAAGAATaGGGGCCACAAGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEAKTWKE*GPQDPG
Trigger: CCCTGGATCTTGTGGCCCCAATTCTTTCCATGTTTT...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGAAAACATGGAAAGAATaGGGGCCACAAGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVKTWKE*GPQDPG
Trigger: CCCTGGATCTTGTGGCCCCAATTCTTTCCATGTTTT...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTAAAACATGGAAAGAATaGGGGCCACAAGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVKTWKE*GPQDPG
Trigger: CCCTGGATCTTGTGGCCCCAATTCTTTCCATGTTTT...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGATGCCATGTACTTGTCTTTTAATCGGGGTCTCCAGTaGGGTGTTCGAAGTAATGTT +
Preference number: 5 (lower is better)
Translates to: NPSIDFAFCPRDAMYLSFNRGLQ*GVRSNV
Trigger: AACATTACTTCGAACACCCAACTGGAGACCCCGATT...AAAAGACAAGTACATGGCATCCCGGGGACAAAAAGCGAAGTCAATGGAAGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTAATCGGGGTCTCCAGTaGGGTGTTCGAAGTAATGTT +
Preference number: 5 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVNRGLQ*GVRSNV
Trigger: AACATTACTTCGAACACCCAACTGGAGACCCCGATT...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGTTCTTTCTCAGCTCCTaGGTATTCAATGTACTTGTA +
Preference number: 5 (lower is better)
Translates to: RMLSRSWNPSIDFAFCPRFFLSS*VFNVLV
Trigger: TACAAGTACATTGAATACCAAGGAGCTGAGAAAGAA...CCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTTTCTTTCTCAGCTCCTaGGTATTCAATGTACTTGTA +
Preference number: 5 (lower is better)
Translates to: AGTSMEDVGLLRKQVKHGFFLSS*VFNVLV
Trigger: TACAAGTACATTGAATACCAAGGAGCTGAGAAAGAA...ACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTAGGAGGCGAGGATGCTaGACATGTAAGTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSRRRGC*TCKSSS
Trigger: AGATGAAGACTTACATGTCAAGCATCCTCGCCTCCT...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTAGGAGGCGAGGATGCTaGACATGTAAGTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEARRRGC*TCKSSS
Trigger: AGATGAAGACTTACATGTCAAGCATCCTCGCCTCCT...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTAGGAGGCGAGGATGCTaGACATGTAAGTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVRRRGC*TCKSSS
Trigger: AGATGAAGACTTACATGTCAAGCATCCTCGCCTCCT...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGAGACCTTTTCCTGCTTaGAGCTGTGAGGCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVERPFPA*SCEAKV
Trigger: CACCTTTGCCTCACAGCTCAAAGCAGGAAAAGGTCT...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGACCTTTTCCTGCTTaGAGCTGTGAGGCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYRPFPA*SCEAKV
Trigger: CACCTTTGCCTCACAGCTCAAAGCAGGAAAAGGTCT...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAAAATTGCTCCACATaGCTGGGAAAGAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSENCST*LGKKEM
Trigger: CATCTCCTTCTTTCCCAGCAATGTGGAGCAATTTTC...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CAA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGGAAAATTGCTCCACATaGCTGGGAAAGAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: PLTAQTWLERLEHCSDVEENCST*LGKKEM
Trigger: CATCTCCTTCTTTCCCAGCAATGTGGAGCAATTTTC...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CAA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTGTTGCCCTCAGAAAATaGCTCCACATTGCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASVALRK*LHIAGK
Trigger: TTTCCCAGCAATGTGGAGCAATTTTCTGAGGGCAAC...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CAA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACACCACACATCAATGTaGCCCTCAGAAAATTGCTCC +
Preference number: 5 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTHHTSM*PSENCS
Trigger: GGAGCAATTTTCTGAGGGCAACATTGATGTGTGGTG...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCACCACACATCAATGTaGCCCTCAGAAAATTGCTCC +
Preference number: 5 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEAHHTSM*PSENCS
Trigger: GGAGCAATTTTCTGAGGGCAACATTGATGTGTGGTG...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTCACCACACATCAATGTaGCCCTCAGAAAATTGCTCC +
Preference number: 5 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASHHTSM*PSENCS
Trigger: GGAGCAATTTTCTGAGGGCAACATTGATGTGTGGTG...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGATGCCATGTACTTGTCTTTTCACCACACATCAATGTaGCCCTCAGAAAATTGCTCC +
Preference number: 5 (lower is better)
Translates to: NPSIDFAFCPRDAMYLSFHHTSM*PSENCS
Trigger: GGAGCAATTTTCTGAGGGCAACATTGATGTGTGGTG...AAAAGACAAGTACATGGCATCCCGGGGACAAAAAGCGAAGTCAATGGAAGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATCACTTTCGCCACACCTaGTGCTGTTTCAGTAGGAAT +
Preference number: 5 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDHFRHT*CCFSRN
Trigger: ATTCCTACTGAAACAGCACAAGGTGTGGCGAAAGTG...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTCACTTTCGCCACACCTaGTGCTGTTTCAGTAGGAAT +
Preference number: 5 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASHFRHT*CCFSRN
Trigger: ATTCCTACTGAAACAGCACAAGGTGTGGCGAAAGTG...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGGAGCATCTGGGACCTTaGTTCCATCATCAAAGTGCG +
Preference number: 5 (lower is better)
Translates to: AFSVMTADQMGALLHRYLEHLGP*FHHQSA
Trigger: CGCACTTTGATGATGGAACAAAGGTCCCAGATGCTC...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACATGGTCAATCGTAGCATaGAGTTTCGGTCTTTCACCA +
Preference number: 5 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTWSIVA*SFGLSP
Trigger: TGGTGAAAGACCGAAACTCAATGCTACGATTGACCA...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGCCATGTACTTGTCTTTaGTCCAAGTCATGTGCACCT +
Preference number: 5 (lower is better)
Translates to: PLTAQTWLERLEHCSDVEPCTCL*SKSCAP
Trigger: AGGTGCACATGACTTGGACAAAAGACAAGTACATGG...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATCGGGATGCCATGTACTaGTCTTTTGTCCAAGTCATG +
Preference number: 5 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYRDAMY*SFVQVM
Trigger: CATGACTTGGACAAAAGACAAGTACATGGCATCCCG...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACGGGATGCCATGTACTaGTCTTTTGTCCAAGTCATG +
Preference number: 5 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTRDAMY*SFVQVM
Trigger: CATGACTTGGACAAAAGACAAGTACATGGCATCCCG...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTCGGGATGCCATGTACTaGTCTTTTGTCCAAGTCATG +
Preference number: 5 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVRDAMY*SFVQVM
Trigger: CATGACTTGGACAAAAGACAAGTACATGGCATCCCG...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACCCTGGAATCCTTCCATaGACTTCGCTTTTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYPGILP*TSLFVP
Trigger: GGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGG...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGCCTGGAATCCTTCCATaGACTTCGCTTTTTGTCCCC +
Preference number: 5 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVEPGILP*TSLFVP
Trigger: GGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGG...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTTGCTTCATGGGACTaGTTAACTATAACCTCGTTG +
Preference number: 5 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSFASWD*LTITSL
Trigger: CAACGAGGTTATAGTTAACAAGTCCCATGAAGCAAA...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCACTTTTACACAGGTACTaGAGGCTCAGCTCATCAAGA +
Preference number: 5 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSLLHRY*RLSSSR
Trigger: TCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCACGTGGCTTGAAAGACTaGAGCATTGTTCTGATGTTG +
Preference number: 5 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSRGLKD*SIVLML
Trigger: CAACATCAGAACAATGCTCAAGTCTTTCAAGCCACG...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGTTTGCATCTTGGCTaGCCGAGGATAATAGGTCCA +
Preference number: 5 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSCLHLG*PRIIGP
Trigger: TGGACCTATTATCCTCGGCAAGCCAAGATGCAAACA...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTGTTTGCATCTTGGCTaGCCGAGGATAATAGGTCCA +
Preference number: 5 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVCLHLG*PRIIGP
Trigger: TGGACCTATTATCCTCGGCAAGCCAAGATGCAAACA...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTTGTTTGCATCTTGGCTaGCCGAGGATAATAGGTCCA +
Preference number: 5 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEACLHLG*PRIIGP
Trigger: TGGACCTATTATCCTCGGCAAGCCAAGATGCAAACA...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTTGTTTGCATCTTGGCTaGCCGAGGATAATAGGTCCA +
Preference number: 5 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASCLHLG*PRIIGP
Trigger: TGGACCTATTATCCTCGGCAAGCCAAGATGCAAACA...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CGCATGTTAAGCAGGTCCTGGAATCCTTCCATTGACTTCGCTTTTTGTCCCCGGAAAACAATGCCAATCTaGTGTGACTTCTTTCCTTCA +
Preference number: 5 (lower is better)
Translates to: RMLSRSWNPSIDFAFCPRKTMPI*CDFFPS
Trigger: TGAAGGAAAGAAGTCACACAAGATTGGCATTGTTTT...CCGGGGACAAAAAGCGAAGTCAATGGAAGGATTCCAGGACCTGCTTAACATGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATAAACGTCAATGTGTCTaGATGAAAGGGTGCGGTTAC +
Preference number: 5 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDKRQCV*MKGCGY
Trigger: GTAACCGCACCCTTTCATCAAGACACATTGACGTTT...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTAAACGTCAATGTGTCTaGATGAAAGGGTGCGGTTAC +
Preference number: 5 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEAKRQCV*MKGCGY
Trigger: GTAACCGCACCCTTTCATCAAGACACATTGACGTTT...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCAATGTTGTTAATTTCCTaGGTCTTAGAGCAAACGTCA +
Preference number: 5 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSMLLIS*VLEQTS
Trigger: TGACGTTTGCTCTAAGACCAAGGAAATTAACAACAT...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGGATGGGACTGTCATGTaGTTAATTTCCTTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSEDGTVM*LISLVL
Trigger: TAAGACCAAGGAAATTAACAACATGACAGTCCCATC...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AAAAGACTTAAGATCCTATCCGCTTTGCCATCCTCAGTGGGCCTGGAGGTTGAAGATGGGACTGTCATGTaGTTAATTTCCTTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: KRLKILSALPSSVGLEVEDGTVM*LISLVL
Trigger: TAAGACCAAGGAAATTAACAACATGACAGTCCCATC...TTCAACCTCCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTTAAGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAAGAATCCCCATAACTTaGATGGGACTGTCATGTTGT +
Preference number: 5 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQRIPIT*MGLSCC
Trigger: ACAACATGACAGTCCCATCAAAGTTATGGGGATTCT...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTAGAATCCCCATAACTTaGATGGGACTGTCATGTTGT +
Preference number: 5 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGRIPIT*MGLSCC
Trigger: ACAACATGACAGTCCCATCAAAGTTATGGGGATTCT...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAAGAATCCCCATAACTTaGATGGGACTGTCATGTTGT +
Preference number: 5 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSRIPIT*MGLSCC
Trigger: ACAACATGACAGTCCCATCAAAGTTATGGGGATTCT...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGGGTGGCATTGAAAAATaGACTCGAGTTACAGAAGAA +
Preference number: 5 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSEGGIEK*TRVTEE
Trigger: TTCTTCTGTAACTCGAGTCAATTTTTCAATGCCACC...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAAAGACATCAGAAGATTaGGCTGAAGGCTTTTCGATG +
Preference number: 5 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTKTSED*AEGFSM
Trigger: CATCGAAAAGCCTTCAGCCAAATCTTCTGATGTCTT...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGGTATGATGTTATCCTaGGCAATAGCTTGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVGMMLS*AIACSS
Trigger: GCTGCTACAAGCTATTGCCAAGGATAACATCATACC...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGAAAACATGGAAAGAATaGGGGCCACAAGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: FSVMTADQMGALLHRYLRKTWKE*GPQDPG
Trigger: CCCTGGATCTTGTGGCCCCAATTCTTTCCATGTTTT...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAAAACATGGAAAGAATaGGGGCCACAAGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYKTWKE*GPQDPG
Trigger: CCCTGGATCTTGTGGCCCCAATTCTTTCCATGTTTT...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGAATCGGGGTCTCCAGTaGGGTGTTCGAAGTAATGTT +
Preference number: 5 (lower is better)
Translates to: FSVMTADQMGALLHRYLRNRGLQ*GVRSNV
Trigger: AACATTACTTCGAACACCCAACTGGAGACCCCGATT...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGAGGAGGCGAGGATGCTaGACATGTAAGTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: FSVMTADQMGALLHRYLRRRRGC*TCKSSS
Trigger: AGATGAAGACTTACATGTCAAGCATCCTCGCCTCCT...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGGAGGCGAGGATGCTaGACATGTAAGTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYRRRGC*TCKSSS
Trigger: AGATGAAGACTTACATGTCAAGCATCCTCGCCTCCT...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ACCAGTTTTCCATGTAACAGTGATTTTGTGTTTCGGGCTGAAGCAGTGGTTATAAGACCTTTTCCTGCTTaGAGCTGTGAGGCAAAGGTG +
Preference number: 5 (lower is better)
Translates to: TSFPCNSDFVFRAEAVVIRPFPA*SCEAKV
Trigger: CACCTTTGCCTCACAGCTCAAAGCAGGAAAAGGTCT...TATAACCACTGCTTCAGCCCGAAACACAAAATCACTGTTACATGGAAAACTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGCAAGATGGGCAGCAGTaGTCACTCGAACTGTGCCAA +
Preference number: 5 (lower is better)
Translates to: IFAFSVMTADQMGALLHRQDGQQ*SLELCQ
Trigger: TTGGCACAGTTCGAGTGACAACTGCTGCCCATCTTG...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CAA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGGAAAATTGCTCCACATaGCTGGGAAAGAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVENCST*LGKKEM
Trigger: CATCTCCTTCTTTCCCAGCAATGTGGAGCAATTTTC...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CAA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACGTTGCCCTCAGAAAATaGCTCCACATTGCTGGGAAA +
Preference number: 5 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYVALRK*LHIAGK
Trigger: TTTCCCAGCAATGTGGAGCAATTTTCTGAGGGCAAC...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CAA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACCACCACACATCAATGTaGCCCTCAGAAAATTGCTCC +
Preference number: 5 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYHHTSM*PSENCS
Trigger: GGAGCAATTTTCTGAGGGCAACATTGATGTGTGGTG...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGCACCACACATCAATGTaGCCCTCAGAAAATTGCTCC +
Preference number: 5 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVEHHTSM*PSENCS
Trigger: GGAGCAATTTTCTGAGGGCAACATTGATGTGTGGTG...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGCACTTTCGCCACACCTaGTGCTGTTTCAGTAGGAAT +
Preference number: 5 (lower is better)
Translates to: AFSVMTADQMGALLHRYLHFRHT*CCFSRN
Trigger: ATTCCTACTGAAACAGCACAAGGTGTGGCGAAAGTG...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCACTTTCGCCACACCTaGTGCTGTTTCAGTAGGAAT +
Preference number: 5 (lower is better)
Translates to: FSVMTADQMGALLHRYLRHFRHT*CCFSRN
Trigger: ATTCCTACTGAAACAGCACAAGGTGTGGCGAAAGTG...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCATTTGGATACTGTaGTCTTCTAATTGGGCTACT +
Preference number: 5 (lower is better)
Translates to: WHFHGGRRPFKKTGQARSFIWIL*SSNWAT
Trigger: AGTAGCCCAATTAGAAGACAACAGTATCCAAATGAA...TGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTCATAGGTAAGACTCAAAAGCGGGATCTTATTCAAAAGGCAGGTATTTCCTTTTCGGTCTTTCACCAATaGTGCCTCTCTGTCTCGCTC +
Preference number: 5 (lower is better)
Translates to: VIGKTQKRDLIQKAGISFSVFHQ*CLSVSL
Trigger: GAGCGAGACAGAGAGGCACAATTGGTGAAAGACCGA...AAAGGAAATACCTGCCTTTTGAATAAGATCCCGCTTTTGAGTCTTACCTATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp GGTCAATGCCAATCTGTATGCCATTTTAGTAAAGTAGGTAAGGAGAGTAGCCGCTGGTCAATCGTAGCATaGAGTTTCGGTCTTTCACCA +
Preference number: 5 (lower is better)
Translates to: GQCQSVCHFSKVGKESSRWSIVA*SFGLSP
Trigger: TGGTGAAAGACCGAAACTCAATGCTACGATTGACCA...GCGGCTACTCTCCTTACCTACTTTACTAAAATGGCATACAGATTGGCATTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CAA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATTGGTCAATCGTAGCATaGAGTTTCGGTCTTTCACCA +
Preference number: 5 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDWSIVA*SFGLSP
Trigger: TGGTGAAAGACCGAAACTCAATGCTACGATTGACCA...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTTGGTCAATCGTAGCATaGAGTTTCGGTCTTTCACCA +
Preference number: 5 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVWSIVA*SFGLSP
Trigger: TGGTGAAAGACCGAAACTCAATGCTACGATTGACCA...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTTGGTCAATCGTAGCATaGAGTTTCGGTCTTTCACCA +
Preference number: 5 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASWSIVA*SFGLSP
Trigger: TGGTGAAAGACCGAAACTCAATGCTACGATTGACCA...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGCCATGTACTTGTCTTTaGTCCAAGTCATGTGCACCT +
Preference number: 5 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVPCTCL*SKSCAP
Trigger: AGGTGCACATGACTTGGACAAAAGACAAGTACATGG...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTCCATGTACTTGTCTTTaGTCCAAGTCATGTGCACCT +
Preference number: 5 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSPCTCL*SKSCAP
Trigger: AGGTGCACATGACTTGGACAAAAGACAAGTACATGG...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACCGGGATGCCATGTACTaGTCTTTTGTCCAAGTCATG +
Preference number: 5 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYRDAMY*SFVQVM
Trigger: CATGACTTGGACAAAAGACAAGTACATGGCATCCCG...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCATTAACTATAACCTCGTaGAGTTTCACTGCTGTATGC +
Preference number: 5 (lower is better)
Translates to: TADQMGALLHRYLRLSSSLTITS*SFTAVC
Trigger: GCATACAGCAGTGAAACTCAACGAGGTTATAGTTAA...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGGTTTCTGTCTCTTCGTCCTCATCAGAGCCAATGCTGGTCAATCGTAGCATTGTTAACTATAACCTCGTaGAGTTTCACTGCTGTATGC +
Preference number: 5 (lower is better)
Translates to: RFLSLRPHQSQCWSIVALLTITS*SFTAVC
Trigger: GCATACAGCAGTGAAACTCAACGAGGTTATAGTTAA...CAATGCTACGATTGACCAGCATTGGCTCTGATGAGGACGAAGAGACAGAAACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCATTAACTATAACCTCGTaGAGTTTCACTGCTGTATGC +
Preference number: 5 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQALTITS*SFTAVC
Trigger: GCATACAGCAGTGAAACTCAACGAGGTTATAGTTAA...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AAAAGACTTAAGATCCTATCCGCTTTGCCATCCTCAGTGGGCCTGGAGGTTGAATTTGCTTCATGGGACTaGTTAACTATAACCTCGTTG +
Preference number: 5 (lower is better)
Translates to: KRLKILSALPSSVGLEVEFASWD*LTITSL
Trigger: CAACGAGGTTATAGTTAACAAGTCCCATGAAGCAAA...TTCAACCTCCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTTAAGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp TCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAGAGTTTGCTTCATGGGACTaGTTAACTATAACCTCGTTG +
Preference number: 5 (lower is better)
Translates to: SMEDVGLLRKQVKHGHSEFASWD*LTITSL
Trigger: CAACGAGGTTATAGTTAACAAGTCCCATGAAGCAAA...CTCTGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACTTTTACACAGGTACTaGAGGCTCAGCTCATCAAGA +
Preference number: 5 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTLLHRY*RLSSSR
Trigger: TCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AATCCTTCCATTGACTTCGCTTTTTGTCCCCGGGATGCCATGTACTTGTCTTTTCTTTTACACAGGTACTaGAGGCTCAGCTCATCAAGA +
Preference number: 5 (lower is better)
Translates to: NPSIDFAFCPRDAMYLSFLLHRY*RLSSSR
Trigger: TCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG...AAAAGACAAGTACATGGCATCCCGGGGACAAAAAGCGAAGTCAATGGAAGGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTCTTTTACACAGGTACTaGAGGCTCAGCTCATCAAGA +
Preference number: 5 (lower is better)
Translates to: GSAHQEFSMMCTEHRLLVLLHRY*RLSSSR
Trigger: TCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG...AACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTCGTGGCTTGAAAGACTaGAGCATTGTTCTGATGTTG +
Preference number: 5 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASRGLKD*SIVLML
Trigger: CAACATCAGAACAATGCTCAAGTCTTTCAAGCCACG...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCGTGGCTTGAAAGACTaGAGCATTGTTCTGATGTTG +
Preference number: 5 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEARGLKD*SIVLML
Trigger: CAACATCAGAACAATGCTCAAGTCTTTCAAGCCACG...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTGCTCAGACGTGGCTaGAAAGACTTGAGCATTGTT +
Preference number: 5 (lower is better)
Translates to: FSVMTADQMGALLHRYLRLLRRG*KDLSIV
Trigger: AACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAG...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAAATTCTAATTTGCCTTaGACTGCTCAGACGTGGCTT +
Preference number: 5 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTNSNLP*TAQTWL
Trigger: AAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAATT...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAAATTCTAATTTGCCTTaGACTGCTCAGACGTGGCTT +
Preference number: 5 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQNSNLP*TAQTWL
Trigger: AAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAATT...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTAATTCTAATTTGCCTTaGACTGCTCAGACGTGGCTT +
Preference number: 5 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGNSNLP*TAQTWL
Trigger: AAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAATT...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTAATTCTAATTTGCCTTaGACTGCTCAGACGTGGCTT +
Preference number: 5 (lower is better)
Translates to: PMLVNRSIEFRSFTNCASNSNLP*TAQTWL
Trigger: AAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAATT...AGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGTGTTTGCATCTTGGCTaGCCGAGGATAATAGGTCCA +
Preference number: 5 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVECLHLG*PRIIGP
Trigger: TGGACCTATTATCCTCGGCAAGCCAAGATGCAAACA...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCGAACTTCCAATTCCATaGCTAGATGTGCCCTTTAAA +
Preference number: 5 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFELPIP*LDVPFK
Trigger: TTTAAAGGGCACATCTAGCAATGGAATTGGAAGTTC...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CAA 90 bp AAAAGACTTAAGATCCTATCCGCTTTGCCATCCTCAGTGGGCCTGGAGGTTGAAGAAGATTTCACATACTaGAAATTACTGCTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: KRLKILSALPSSVGLEVEEDFTY*KLLLSQ
Trigger: CTGGCTGAGCAGTAATTTCAAGTATGTGAAATCTTC...TTCAACCTCCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTTAAGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGCATGTAACAGTGATTTaGTGTTTCGGGCTGAAGCAG +
Preference number: 5 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVHVTVI*CFGLKQ
Trigger: CTGCTTCAGCCCGAAACACAAAATCACTGTTACATG...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp ATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCAATCACTGTCATGCTCTaGTATCTCAAACTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: MSWHFHGGRRPFKKTGQAITVML*YLKLSF
Trigger: AAAGCTGAGTTTGAGATACAAGAGCATGACAGTGAT...TGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559523.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACTCTGGAGGATGCATTTaGTTCTTGCGAAGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYSGGCI*FLRREA
Trigger: GGCTTCTCTTCGCAAGAACAAAATGCATCCTCCAGA...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558667.5
CDS-3UTR CAA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAAACGTCAATGTGTCTaGATGAAAGGGTGCGGTTAC +
Preference number: 5 (lower is better)
Translates to: AFSVMTADQMGALLHRYLKRQCV*MKGCGY
Trigger: GTAACCGCACCCTTTCATCAAGACACATTGACGTTT...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGGATGGGACTGTCATGTaGTTAATTTCCTTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: PLTAQTWLERLEHCSDVEDGTVM*LISLVL
Trigger: TAAGACCAAGGAAATTAACAACATGACAGTCCCATC...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGATGGGACTGTCATGTaGTTAATTTCCTTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQDGTVM*LISLVL
Trigger: TAAGACCAAGGAAATTAACAACATGACAGTCCCATC...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGATGGGACTGTCATGTaGTTAATTTCCTTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTDGTVM*LISLVL
Trigger: TAAGACCAAGGAAATTAACAACATGACAGTCCCATC...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCAGGACATGACTCACTACTGTTAAACTCAACTAAGCAATGGAGTGTTGCAGTGAGAATCCCCATAACTTaGATGGGACTGTCATGTTGT +
Preference number: 5 (lower is better)
Translates to: AGHDSLLLNSTKQWSVAVRIPIT*MGLSCC
Trigger: ACAACATGACAGTCCCATCAAAGTTATGGGGATTCT...CACTGCAACACTCCATTGCTTAGTTGAGTTTAACAGTAGTGAGTCATGTCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTAGAATCCCCATAACTTaGATGGGACTGTCATGTTGT +
Preference number: 5 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEARIPIT*MGLSCC
Trigger: ACAACATGACAGTCCCATCAAAGTTATGGGGATTCT...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACAAAGACATCAGAAGATTaGGCTGAAGGCTTTTCGATG +
Preference number: 5 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTKTSED*AEGFSM
Trigger: CATCGAAAAGCCTTCAGCCAAATCTTCTGATGTCTT...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGAAGACATCAGAAGATTaGGCTGAAGGCTTTTCGATG +
Preference number: 5 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVKTSED*AEGFSM
Trigger: CATCGAAAAGCCTTCAGCCAAATCTTCTGATGTCTT...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAAGACATCAGAAGATTaGGCTGAAGGCTTTTCGATG +
Preference number: 5 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASKTSED*AEGFSM
Trigger: CATCGAAAAGCCTTCAGCCAAATCTTCTGATGTCTT...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACGGTATGATGTTATCCTaGGCAATAGCTTGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYGMMLS*AIACSS
Trigger: GCTGCTACAAGCTATTGCCAAGGATAACATCATACC...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGGGTATGATGTTATCCTaGGCAATAGCTTGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: AFSVMTADQMGALLHRYLGMMLS*AIACSS
Trigger: GCTGCTACAAGCTATTGCCAAGGATAACATCATACC...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCATTCTTTCTCAGCTCCTaGGTATTCAATGTACTTGTA +
Preference number: 5 (lower is better)
Translates to: TADQMGALLHRYLRLSSSFFLSS*VFNVLV
Trigger: TACAAGTACATTGAATACCAAGGAGCTGAGAAAGAA...TGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCTTCTTTCTCAGCTCCTaGGTATTCAATGTACTTGTA +
Preference number: 5 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFFFLSS*VFNVLV
Trigger: TACAAGTACATTGAATACCAAGGAGCTGAGAAAGAA...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGGAAAATTGCTCCACATaGCTGGGAAAGAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVEENCST*LGKKEM
Trigger: CATCTCCTTCTTTCCCAGCAATGTGGAGCAATTTTC...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
CDS-3UTR CAA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCTTCATTTGGATACTGTaGTCTTCTAATTGGGCTACT +
Preference number: 5 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFFIWIL*SSNWAT
Trigger: AGTAGCCCAATTAGAAGACAACAGTATCCAAATGAA...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGTGGTCAATCGTAGCATaGAGTTTCGGTCTTTCACCA +
Preference number: 5 (lower is better)
Translates to: FSVMTADQMGALLHRYLRWSIVA*SFGLSP
Trigger: TGGTGAAAGACCGAAACTCAATGCTACGATTGACCA...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAATTTGCTTCATGGGACTaGTTAACTATAACCTCGTTG +
Preference number: 5 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQFASWD*LTITSL
Trigger: CAACGAGGTTATAGTTAACAAGTCCCATGAAGCAAA...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGCTTTTACACAGGTACTaGAGGCTCAGCTCATCAAGA +
Preference number: 5 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVELLHRY*RLSSSR
Trigger: TCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACAAATTCTAATTTGCCTTaGACTGCTCAGACGTGGCTT +
Preference number: 5 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTNSNLP*TAQTWL
Trigger: AAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAATT...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAATTCTAATTTGCCTTaGACTGCTCAGACGTGGCTT +
Preference number: 5 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASNSNLP*TAQTWL
Trigger: AAGCCACGTCTGAGCAGTCAAAGGCAAATTAGAATT...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAACTTGTTAATTCTAATTaGCCTTTGACTGCTCAGACG +
Preference number: 5 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQLVNSN*PLTAQT
Trigger: CGTCTGAGCAGTCAAAGGCAAATTAGAATTAACAAG...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCTTCTTAGACAACAGCTaGTATGTTTTGTCCATGTTG +
Preference number: 5 (lower is better)
Translates to: HFHGGRRPFKKTGQARSFFLDNS*YVLSML
Trigger: CAACATGGACAAAACATACAAGCTGTTGTCTAAGAA...GAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CAA 90 bp AAAAGACTTAAGATCCTATCCGCTTTGCCATCCTCAGTGGGCCTGGAGGTTGAAAAAACAATGCCAATCTaGTGTGACTTCTTTCCTTCA +
Preference number: 5 (lower is better)
Translates to: KRLKILSALPSSVGLEVEKTMPI*CDFFPS
Trigger: TGAAGGAAAGAAGTCACACAAGATTGGCATTGTTTT...TTCAACCTCCAGGCCCACTGAGGATGGCAAAGCGGATAGGATCTTAAGTCTTTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000676379.1
CDS-3UTR CAA 90 bp CCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGAGGTTGCCCTCAGAAAATaGCTCCACATTGCAATAAAA +
Preference number: 5 (lower is better)
Translates to: PLTAQTWLERLEHCSDVEVALRK*LHIAIK
Trigger: TTTTATTGCAATGTGGAGCAATTTTCTGAGGGCAAC...CTCAACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS TCA 90 bp CAGAAGGAAGAGATCACAGGAGATGACAGGATAAGGGCATTATTTTaGATGCTCCCAGTACTATCTCAAGTTGATCAGTCTTCAAGGAAG +
Preference number: 5 (lower is better)
Translates to: QKEEITGDDRIRALF*MLPVLSQVDQSSRK
Trigger: CTTCCTTGAAGACTGATCAACTTGAGATAGTACTGGGAGCATTCAAAATAATGCCCTTATCCTGTCATCTCCTGTGATCTCTTCCTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558950.1
CDS-3UTR CAA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAATGTTGTTAATTTCCTaGGTCTTAGAGCAAACGTCA +
Preference number: 5 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQMLLIS*VLEQTS
Trigger: TGACGTTTGCTCTAAGACCAAGGAAATTAACAACAT...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAATGTTGTTAATTTCCTaGGTCTTAGAGCAAACGTCA +
Preference number: 5 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTMLLIS*VLEQTS
Trigger: TGACGTTTGCTCTAAGACCAAGGAAATTAACAACAT...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAAGCACGGTCATTCAATGTTGTTAATTTCCTaGGTCTTAGAGCAAACGTCA +
Preference number: 5 (lower is better)
Translates to: TSMEDVGLLRKQVKHGHSMLLIS*VLEQTS
Trigger: TGACGTTTGCTCTAAGACCAAGGAAATTAACAACAT...TGAATGACCGTGCTTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTATGTTGTTAATTTCCTaGGTCTTAGAGCAAACGTCA +
Preference number: 5 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGMLLIS*VLEQTS
Trigger: TGACGTTTGCTCTAAGACCAAGGAAATTAACAACAT...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTGATGGGACTGTCATGTaGTTAATTTCCTTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSDGTVM*LISLVL
Trigger: TAAGACCAAGGAAATTAACAACATGACAGTCCCATC...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTGATGGGACTGTCATGTaGTTAATTTCCTTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVDGTVM*LISLVL
Trigger: TAAGACCAAGGAAATTAACAACATGACAGTCCCATC...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGGTGGCATTGAAAAATaGACTCGAGTTACAGAAGAA +
Preference number: 5 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDGGIEK*TRVTEE
Trigger: TTCTTCTGTAACTCGAGTCAATTTTTCAATGCCACC...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTGGTGGCATTGAAAAATaGACTCGAGTTACAGAAGAA +
Preference number: 5 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASGGIEK*TRVTEE
Trigger: TTCTTCTGTAACTCGAGTCAATTTTTCAATGCCACC...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAAGACATCAGAAGATTaGGCTGAAGGCTTTTCGATG +
Preference number: 5 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYKTSED*AEGFSM
Trigger: CATCGAAAAGCCTTCAGCCAAATCTTCTGATGTCTT...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAAAAACATGGAAAGAATaGGGGCCACAAGATCCAGGG +
Preference number: 5 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTKTWKE*GPQDPG
Trigger: CCCTGGATCTTGTGGCCCCAATTCTTTCCATGTTTT...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAAATCGGGGTCTCCAGTaGGGTGTTCGAAGTAATGTT +
Preference number: 5 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTNRGLQ*GVRSNV
Trigger: AACATTACTTCGAACACCCAACTGGAGACCCCGATT...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATAATCGGGGTCTCCAGTaGGGTGTTCGAAGTAATGTT +
Preference number: 5 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHNRGLQ*GVRSNV
Trigger: AACATTACTTCGAACACCCAACTGGAGACCCCGATT...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTGGTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACATTCTTTCTCAGCTCCTaGGTATTCAATGTACTTGTA +
Preference number: 5 (lower is better)
Translates to: VVVMSWHFHGGRRPFKKTFFLSS*VFNVLV
Trigger: TACAAGTACATTGAATACCAAGGAGCTGAGAAAGAA...TGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTACCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAATTCTTTCTCAGCTCCTaGGTATTCAATGTACTTGTA +
Preference number: 5 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQFFLSS*VFNVLV
Trigger: TACAAGTACATTGAATACCAAGGAGCTGAGAAAGAA...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTCATAGGTAAGACTCAAAAGCGGGATCTTATTCAAAAGGCAGGTATTTCCTTTAGGAGGCGAGGATGCTaGACATGTAAGTCTTCATCT +
Preference number: 5 (lower is better)
Translates to: VIGKTQKRDLIQKAGISFRRRGC*TCKSSS
Trigger: AGATGAAGACTTACATGTCAAGCATCCTCGCCTCCT...AAAGGAAATACCTGCCTTTTGAATAAGATCCCGCTTTTGAGTCTTACCTATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp ACCAGTTTTCCATGTAACAGTGATTTTGTGTTTCGGGCTGAAGCAGTGGTTATAGAAAATTGCTCCACATaGCTGGGAAAGAAGGAGATG +
Preference number: 5 (lower is better)
Translates to: TSFPCNSDFVFRAEAVVIENCST*LGKKEM
Trigger: CATCTCCTTCTTTCCCAGCAATGTGGAGCAATTTTC...TATAACCACTGCTTCAGCCCGAAACACAAAATCACTGTTACATGGAAAACTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp CAGAGCCAATGCTGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGTTCATTTGGATACTGTaGTCTTCTAATTGGGCTACT +
Preference number: 5 (lower is better)
Translates to: QSQCWSIVALSFGLSPIVFIWIL*SSNWAT
Trigger: AGTAGCCCAATTAGAAGACAACAGTATCCAAATGAA...CACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCAGCATTGGCTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TGGTCAATCGTAGCATTGAGTTTCGGTCTTTCACCAATTGTGCCTCTCTGTCTCTTCATTTGGATACTGTaGTCTTCTAATTGGGCTACT +
Preference number: 5 (lower is better)
Translates to: WSIVALSFGLSPIVPLCLFIWIL*SSNWAT
Trigger: AGTAGCCCAATTAGAAGACAACAGTATCCAAATGAA...GAGACAGAGAGGCACAATTGGTGAAAGACCGAAACTCAATGCTACGATTGACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTCAATTCATTTGGATACTGTaGTCTTCTAATTGGGCTACT +
Preference number: 5 (lower is better)
Translates to: VMSWHFHGGRRPFKKTGQFIWIL*SSNWAT
Trigger: AGTAGCCCAATTAGAAGACAACAGTATCCAAATGAA...TTGACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTAGTAATGAGCTGGCACTTCCATGGAGGACGTAGGCCTTTTAAGAAAACAGGTTTCATTTGGATACTGTaGTCTTCTAATTGGGCTACT +
Preference number: 5 (lower is better)
Translates to: VVMSWHFHGGRRPFKKTGFIWIL*SSNWAT
Trigger: AGTAGCCCAATTAGAAGACAACAGTATCCAAATGAA...ACCTGTTTTCTTAAAAGGCCTACGTCCTCCATGGAAGTGCCAGCTCATTACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACGGGATGCCATGTACTaGTCTTTTGTCCAAGTCATG +
Preference number: 5 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTRDAMY*SFVQVM
Trigger: CATGACTTGGACAAAAGACAAGTACATGGCATCCCG...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATTTAACTATAACCTCGTaGAGTTTCACTGCTGTATGC +
Preference number: 5 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYLTITS*SFTAVC
Trigger: GCATACAGCAGTGAAACTCAACGAGGTTATAGTTAA...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATTTAACTATAACCTCGTaGAGTTTCACTGCTGTATGC +
Preference number: 5 (lower is better)
Translates to: GALLHRYLRLSSSRVQYDLTITS*SFTAVC
Trigger: GCATACAGCAGTGAAACTCAACGAGGTTATAGTTAA...ATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTTAACTATAACCTCGTaGAGTTTCACTGCTGTATGC +
Preference number: 5 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSLTITS*SFTAVC
Trigger: GCATACAGCAGTGAAACTCAACGAGGTTATAGTTAA...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTTTAACTATAACCTCGTaGAGTTTCACTGCTGTATGC +
Preference number: 5 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASLTITS*SFTAVC
Trigger: GCATACAGCAGTGAAACTCAACGAGGTTATAGTTAA...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTTTTGCTTCATGGGACTaGTTAACTATAACCTCGTTG +
Preference number: 5 (lower is better)
Translates to: LRLSSSRVQYDVYRTQASFASWD*LTITSL
Trigger: CAACGAGGTTATAGTTAACAAGTCCCATGAAGCAAA...AGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTCATAGGTAAGACTCAAAAGCGGGATCTTATTCAAAAGGCAGGTATTTCCTTTCTGCTCAGACGTGGCTaGAAAGACTTGAGCATTGTT +
Preference number: 5 (lower is better)
Translates to: VIGKTQKRDLIQKAGISFLLRRG*KDLSIV
Trigger: AACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAG...AAAGGAAATACCTGCCTTTTGAATAAGATCCCGCTTTTGAGTCTTACCTATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CAA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATCTTGTTAATTCTAATTaGCCTTTGACTGCTCAGACG +
Preference number: 5 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYLVNSN*PLTAQT
Trigger: CGTCTGAGCAGTCAAAGGCAAATTAGAATTAACAAG...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGCTTGTTAATTCTAATTaGCCTTTGACTGCTCAGACG +
Preference number: 5 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVLVNSN*PLTAQT
Trigger: CGTCTGAGCAGTCAAAGGCAAATTAGAATTAACAAG...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTGTTTGCATCTTGGCTaGCCGAGGATAATAGGTCCA +
Preference number: 5 (lower is better)
Translates to: IFAFSVMTADQMGALLHRCLHLG*PRIIGP
Trigger: TGGACCTATTATCCTCGGCAAGCCAAGATGCAAACA...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATGGGGAGAAGAACCTGTaGATTAATGTGCACCATGAC +
Preference number: 5 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHGEKNL*INVHHD
Trigger: GTCATGGTGCACATTAATCAACAGGTTCTTCTCCCC...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CAA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATATAGCGTGGATCAGATaGCTAAAAGGTGTACACCCG +
Preference number: 5 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHIAWIR*LKGVHP
Trigger: CGGGTGTACACCTTTTAGCAATCTGATCCACGCTAT...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTGTTGCCCTCAGAAAATaGCTCCACATTGCAATAAAA +
Preference number: 5 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEAVALRK*LHIAIK
Trigger: TTTTATTGCAATGTGGAGCAATTTTCTGAGGGCAAC...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTATGTTGTTAATTTCCTaGGTCTTAGAGCAAACGTCA +
Preference number: 5 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVMLLIS*VLEQTS
Trigger: TGACGTTTGCTCTAAGACCAAGGAAATTAACAACAT...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ATGGGAGCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATATGTTGTTAATTTCCTaGGTCTTAGAGCAAACGTCA +
Preference number: 5 (lower is better)
Translates to: MGALLHRYLRLSSSRVQYMLLIS*VLEQTS
Trigger: TGACGTTTGCTCTAAGACCAAGGAAATTAACAACAT...ATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGCTCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGGGTGGCATTGAAAAATaGACTCGAGTTACAGAAGAA +
Preference number: 5 (lower is better)
Translates to: AFSVMTADQMGALLHRYLGGIEK*TRVTEE
Trigger: TTCTTCTGTAACTCGAGTCAATTTTTCAATGCCACC...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGGGTATGATGTTATCCTaGGCAATAGCTTGTAGCAGC +
Preference number: 5 (lower is better)
Translates to: IFAFSVMTADQMGALLHRGMMLS*AIACSS
Trigger: GCTGCTACAAGCTATTGCCAAGGATAACATCATACC...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTTCTTTCTCAGCTCCTaGGTATTCAATGTACTTGTA +
Preference number: 5 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVFFLSS*VFNVLV
Trigger: TACAAGTACATTGAATACCAAGGAGCTGAGAAAGAA...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTTTCTTTCTCAGCTCCTaGGTATTCAATGTACTTGTA +
Preference number: 5 (lower is better)
Translates to: FCNDCRSDGSSFTQVLEAFFLSS*VFNVLV
Trigger: TACAAGTACATTGAATACCAAGGAGCTGAGAAAGAA...AGCCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACATTCTTTCTCAGCTCCTaGGTATTCAATGTACTTGTA +
Preference number: 5 (lower is better)
Translates to: HRYLRLSSSRVQYDVYRTFFLSS*VFNVLV
Trigger: TACAAGTACATTGAATACCAAGGAGCTGAGAAAGAA...TGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTTCATTTGGATACTGTaGTCTTCTAATTGGGCTACT +
Preference number: 5 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVFIWIL*SSNWAT
Trigger: AGTAGCCCAATTAGAAGACAACAGTATCCAAATGAA...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTTCATTTGGATACTGTaGTCTTCTAATTGGGCTACT +
Preference number: 5 (lower is better)
Translates to: RLSSSRVQYDVYRTQASSFIWIL*SSNWAT
Trigger: AGTAGCCCAATTAGAAGACAACAGTATCCAAATGAA...ACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGAGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATTGGTCAATCGTAGCATaGAGTTTCGGTCTTTCACCA +
Preference number: 5 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHWSIVA*SFGLSP
Trigger: TGGTGAAAGACCGAAACTCAATGCTACGATTGACCA...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGTGTGGCTCTAGAACTTCCAATTCCATTGCTAGATGTGCCCTTTAAAAGATGGTTTGCTTCATGGGACTaGTTAACTATAACCTCGTTG +
Preference number: 5 (lower is better)
Translates to: SVALELPIPLLDVPFKRWFASWD*LTITSL
Trigger: CAACGAGGTTATAGTTAACAAGTCCCATGAAGCAAA...CCATCTTTTAAAGGGCACATCTAGCAATGGAATTGGAAGTTCTAGAGCCACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CAA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACTTTGCTTCATGGGACTaGTTAACTATAACCTCGTTG +
Preference number: 5 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYFASWD*LTITSL
Trigger: CAACGAGGTTATAGTTAACAAGTCCCATGAAGCAAA...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGTTTGCTTCATGGGACTaGTTAACTATAACCTCGTTG +
Preference number: 5 (lower is better)
Translates to: FSVMTADQMGALLHRYLRFASWD*LTITSL
Trigger: CAACGAGGTTATAGTTAACAAGTCCCATGAAGCAAA...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGTACCTTGTTAATTCTAATTaGCCTTTGACTGCTCAGACG +
Preference number: 5 (lower is better)
Translates to: LLHRYLRLSSSRVQYDVYLVNSN*PLTAQT
Trigger: CGTCTGAGCAGTCAAAGGCAAATTAGAATTAACAAG...GTACACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGCTTGTTAATTCTAATTaGCCTTTGACTGCTCAGACG +
Preference number: 5 (lower is better)
Translates to: AFSVMTADQMGALLHRYLLVNSN*PLTAQT
Trigger: CGTCTGAGCAGTCAAAGGCAAATTAGAATTAACAAG...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGAGGCTTGTTAATTCTAATTaGCCTTTGACTGCTCAGACG +
Preference number: 5 (lower is better)
Translates to: FSVMTADQMGALLHRYLRLVNSN*PLTAQT
Trigger: CGTCTGAGCAGTCAAAGGCAAATTAGAATTAACAAG...CCTCAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGGAACTTCCAATTCCATaGCTAGATGTGCCCTTTAAA +
Preference number: 5 (lower is better)
Translates to: AFSVMTADQMGALLHRYLELPIP*LDVPFK
Trigger: TTTAAAGGGCACATCTAGCAATGGAATTGGAAGTTC...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CAA 90 bp GCTCTTTTACACAGGTACTTGAGGCTCAGCTCATCAAGAGTTCAGTATGATGTGCTAAATCAAGAACTGTaGCAGCATCTCCTTTCAATA +
Preference number: 5 (lower is better)
Translates to: ALLHRYLRLSSSRVQYDVLNQEL*QHLLSI
Trigger: TATTGAAAGGAGATGCTGCAACAGTTCTTGATTTAG...CACATCATACTGAACTCTTGATGAGCTGAGCCTCAAGTACCTGTGTAAAAGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CAA 90 bp TTGCCTTTGACTGCTCAGACGTGGCTTGAAAGACTTGAGCATTGTTCTGATGTTAAAACAATGCCAATCTaGTGTGACTTCTTTCCTTCA +
Preference number: 5 (lower is better)
Translates to: LPLTAQTWLERLEHCSDVKTMPI*CDFFPS
Trigger: TGAAGGAAAGAAGTCACACAAGATTGGCATTGTTTT...AACATCAGAACAATGCTCAAGTCTTTCAAGCCACGTCTGAGCAGTCAAAGGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS-3UTR CAA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGATCACTGTCATGCTCTaGTATCTCAAACTCAGCTTT +
Preference number: 5 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVEITVML*YLKLSF
Trigger: AAAGCTGAGTTTGAGATACAAGAGCATGACAGTGAT...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000559523.5
ENST00000561080.5
CDS TCA 90 bp CCTAGCATGTCAGGAAAGCAAGGAAATGCTCTTTTCACACTTCTTTaGGCAAGGGGTCCTATTTACTTAGTAGGTTATTTCTCATTACGT +
Preference number: 5 (lower is better)
Translates to: PSMSGKQGNALFTLL*ARGPIYLVGYFSLR
Trigger: ACGTAATGAGAAATAACCTACTAAGTAAATAGGACCCCTTGCTCAAAGAAGTGTGAAAAGAGCATTTCCTTGCTTTCCTGACATGCTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559441.1
CDS-3UTR CAA 90 bp GCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTACTTGTTCTTTCTCAGCTCCTaGGTATTCAATGTACTTGTA +
Preference number: 5 (lower is better)
Translates to: AFSVMTADQMGALLHRYLFFLSS*VFNVLV
Trigger: TACAAGTACATTGAATACCAAGGAGCTGAGAAAGAA...CAAGTACCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CTCCAACCACAAACAGCACTTCTAAAACTAACTTTACTTTCTGCCCATAATTTGCCATGTACTTGTCTTTaGTCCAAGTCATGTGCACCT +
Preference number: 5 (lower is better)
Translates to: LQPQTALLKLTLLSAHNLPCTCL*SKSCAP
Trigger: AGGTGCACATGACTTGGACAAAAGACAAGTACATGG...CAAATTATGGGCAGAAAGTAAAGTTAGTTTTAGAAGTGCTGTTTGTGGTTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp TCAGCTCATCAAGAGTTCAGTATGATGTGTACAGAACACAGGCTTCTAGTTGAGTTCTTAGACAACAGCTaGTATGTTTTGTCCATGTTG +
Preference number: 5 (lower is better)
Translates to: SAHQEFSMMCTEHRLLVEFLDNS*YVLSML
Trigger: CAACATGGACAAAACATACAAGCTGTTGTCTAAGAA...CTCAACTAGAAGCCTGTGTTCTGTACACATCATACTGAACTCTTGATGAGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CAA 90 bp GTCATAGGTAAGACTCAAAAGCGGGATCTTATTCAAAAGGCAGGTATTTCCTTTCACGATAAGGGATTTTaGTTAGCATGTTTAGGGGGA +
Preference number: 5 (lower is better)
Translates to: VIGKTQKRDLIQKAGISFHDKGF*LACLGG
Trigger: TCCCCCTAAACATGCTAACAAAAATCCCTTATCGTG...AAAGGAAATACCTGCCTTTTGAATAAGATCCCGCTTTTGAGTCTTACCTATGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAGGTGGCATTGAAAAATaGACTCGAGTTACAGAAGAA +
Preference number: 5 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTGGIEK*TRVTEE
Trigger: TTCTTCTGTAACTCGAGTCAATTTTTCAATGCCACC...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp AGTAAGATGAAGCTGTCTCTAGTTGTTATCCTCACAGTGTCAACATTGAACCATGGTGGCATTGAAAAATaGACTCGAGTTACAGAAGAA +
Preference number: 5 (lower is better)
Translates to: SKMKLSLVVILTVSTLNHGGIEK*TRVTEE
Trigger: TTCTTCTGTAACTCGAGTCAATTTTTCAATGCCACC...ATGGTTCAATGTTGACACTGTGAGGATAACAACTAGAGACAGCTTCATCTTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GTCATAGGTAAGACTCAAAAGCGGGATCTTATTCAAAAGGCAGGTATTTCCTTTGGTGGCATTGAAAAATaGACTCGAGTTACAGAAGAA +
Preference number: 5 (lower is better)
Translates to: VIGKTQKRDLIQKAGISFGGIEK*TRVTEE
Trigger: TTCTTCTGTAACTCGAGTCAATTTTTCAATGCCACC...AAAGGAAATACCTGCCTTTTGAATAAGATCCCGCTTTTGAGTCTTACCTATGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACTTGTTAATTCTAATTaGCCTTTGACTGCTCAGACG +
Preference number: 5 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTLVNSN*PLTAQT
Trigger: CGTCTGAGCAGTCAAAGGCAAATTAGAATTAACAAG...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACAGAAGATTTCACATACTaGAAATTACTGCTCAGCCAG +
Preference number: 5 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTEDFTY*KLLLSQ
Trigger: CTGGCTGAGCAGTAATTTCAAGTATGTGAAATCTTC...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000290209.9
ENST00000354181.8
CDS-3UTR CAA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGATGTTGTTAATTTCCTaGGTCTTAGAGCAAACGTCA +
Preference number: 5 (lower is better)
Translates to: IFAFSVMTADQMGALLHRMLLIS*VLEQTS
Trigger: TGACGTTTGCTCTAAGACCAAGGAAATTAACAACAT...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CTCCAACCACAAACAGCACTTCTAAAACTAACTTTACTTTCTGCCCATAATTTGGATGGGACTGTCATGTaGTTAATTTCCTTGGTCTTA +
Preference number: 5 (lower is better)
Translates to: LQPQTALLKLTLLSAHNLDGTVM*LISLVL
Trigger: TAAGACCAAGGAAATTAACAACATGACAGTCCCATC...CAAATTATGGGCAGAAAGTAAAGTTAGTTTTAGAAGTGCTGTTTGTGGTTGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS-3UTR CAA 90 bp ATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACACAGGTTCTTTCTCAGCTCCTaGGTATTCAATGTACTTGTA +
Preference number: 5 (lower is better)
Translates to: IFAFSVMTADQMGALLHRFFLSS*VFNVLV
Trigger: TACAAGTACATTGAATACCAAGGAGCTGAGAAAGAA...CCTGTGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp GGGAATATTTGCTTTTTCTGTAATGACTGCAGATCAGATGGGAGCTCTTTTACATTCATTTGGATACTGTaGTCTTCTAATTGGGCTACT +
Preference number: 5 (lower is better)
Translates to: GNICFFCNDCRSDGSSFTFIWIL*SSNWAT
Trigger: AGTAGCCCAATTAGAAGACAACAGTATCCAAATGAA...TGTAAAAGAGCTCCCATCTGATCTGCAGTCATTACAGAAAAAGCAAATATTCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
CDS-3UTR CAA 90 bp CTCCAACCACAAACAGCACTTCTAAAACTAACTTTACTTTCTGCCCATAATTTGTTAACTATAACCTCGTaGAGTTTCACTGCTGTATGC +
Preference number: 5 (lower is better)
Translates to: LQPQTALLKLTLLSAHNLLTITS*SFTAVC
Trigger: GCATACAGCAGTGAAACTCAACGAGGTTATAGTTAA...CAAATTATGGGCAGAAAGTAAAGTTAGTTTTAGAAGTGCTGTTTGTGGTTGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000676379.1
CDS TCA 72 bp GAGGTGAACCTTGCGAAGAGAAGCCCGGGGGTGCAGTaGGAGGGCGGAACCGTCCCGCGGGCGCCCGAAAGC +
Preference number: 6 (lower is better)
Translates to: EVNLAKRSPGVQ*EGGTVPRAPES
Trigger: GCTTTCGGGCGCCCGCGGGACGGTTCCGCCCTCTCACTGCACCCCCGGGCTTCTCTTCGCAAGGTTCACCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561080.5
CDS GCA 72 bp CTTGGTGGTGGTTTCTTGCGAAGAGAAGCCCGGGGGTaGAGTGAGAGGGCGGAACCGTCCCGCGGGCGCCCG +
Preference number: 6 (lower is better)
Translates to: LGGGFLRREARG*SERAEPSRGRP
Trigger: CGGGCGCCCGCGGGACGGTTCCGCCCTCTCACTGCACCCCCGGGCTTCTCTTCGCAAGAAACCACCACCAAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561120.5
CDS TCA 72 bp CTGACAAACCTTGCGAAGAGAAGCCCGGGGGTGCAGTaGGAGGGCGGAACCGTCCCGCGGGCGCCCGAAAGC +
Preference number: 6 (lower is better)
Translates to: LTNLAKRSPGVQ*EGGTVPRAPES
Trigger: GCTTTCGGGCGCCCGCGGGACGGTTCCGCCCTCTCACTGCACCCCCGGGCTTCTCTTCGCAAGGTTTGTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397702.6
CDS TCA 72 bp TGGTGGTTTCTTGCGAAGAGAAGCCCGGGGGTGCAGTaGGAGGGCGGAACCGTCCCGCGGGCGCCCGAAAGC +
Preference number: 6 (lower is better)
Translates to: WWFLAKRSPGVQ*EGGTVPRAPES
Trigger: GCTTTCGGGCGCCCGCGGGACGGTTCCGCCCTCTCACTGCACCCCCGGGCTTCTCTTCGCAAGAAACCACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561120.5
CDS GCA 72 bp GGATGCATTTTGTTCTTGCGAAGAGAAGCCCGGGGGTaGAGTGAGAGGGCGGAACCGTCCCGCGGGCGCCCG +
Preference number: 6 (lower is better)
Translates to: GCILFLRREARG*SERAEPSRGRP
Trigger: CGGGCGCCCGCGGGACGGTTCCGCCCTCTCACTGCACCCCCGGGCTTCTCTTCGCAAGAACAAAATGCATCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558667.5
CDS CCA 72 bp CAGGGGCAGAGCGGATTCCTGTCTCCGAGAGGTCGGTaGGGGTGGCGCGCCCGCTCTTCTCCTAGCAGAAAG +
Preference number: 6 (lower is better)
Translates to: QGQSGFLSPRGR*GWRARSSPSRK
Trigger: CTTTCTGCTAGGAGAAGAGCGGGCGCGCCACCCCCACCGACCTCTCGGAGACAGGAATCCGCTCTGCCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000558589.5
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
ENST00000675289.1
ENST00000676379.1
CDS TCA 72 bp CATTTTGTTCTTGCGAAGAGAAGCCCGGGGGTGCAGTaGGAGGGCGGAACCGTCCCGCGGGCGCCCGAAAGC +
Preference number: 6 (lower is better)
Translates to: HFVLAKRSPGVQ*EGGTVPRAPES
Trigger: GCTTTCGGGCGCCCGCGGGACGGTTCCGCCCTCTCACTGCACCCCCGGGCTTCTCTTCGCAAGAACAAAATG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558667.5
CDS CCA 72 bp CAGAGCGGATTCCTGTCTCCGAGAGGTCGGTGGGGGTaGCGCGCCCGCTCTTCTCCTAGCAGAAAGGTCCTC +
Preference number: 6 (lower is better)
Translates to: QSGFLSPRGRWG*RARSSPSRKVL
Trigger: GAGGACCTTTCTGCTAGGAGAAGAGCGGGCGCGCCACCCCCACCGACCTCTCGGAGACAGGAATCCGCTCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000558589.5
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
ENST00000675289.1
ENST00000676379.1
CDS TCA 72 bp AGAAGGAGGTCGCAGGTGCAGTATCCCGGCGCCAGCTaGTGCGGGTGCGCGCGCAGCTGTTGTTTACTAGCC +
Preference number: 6 (lower is better)
Translates to: RRRSQVQYPGAS*CGCARSCCLLA
Trigger: GGCTAGTAAACAACAGCTGCGCGCGCACCCGCATCAGCTGGCGCCGGGATACTGCACCTGCGACCTCCTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000354181.8
ENST00000559664.5
ENST00000561080.5
CDS TCA 72 bp GCTGAAGGCTCAGTGCCATGGTCTCAGGGCAGCAGATaGAGCCTCCCTCCCCTCAGCCCCCAGTTTCCTGTC +
Preference number: 6 (lower is better)
Translates to: AEGSVPWSQGSR*SLPPLSPQFPV
Trigger: GACAGGAAACTGGGGGCTGAGGGGAGGGAGGCTTCATCTGCTGCCCTGAGACCATGGCACTGAGCCTTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000559664.5
ENST00000561080.5
ENST00000675289.1
ENST00000676379.1
CDS GCA 72 bp CTAGCTAACCCCTCTGGTCCGGGGCTGAAGGCTCAGTaGCATGGTCTCAGGGCAGCAGATGAAGCCTCCCTC +
Preference number: 6 (lower is better)
Translates to: LANPSGPGLKAQ*HGLRAADEASL
Trigger: GAGGGAGGCTTCATCTGCTGCCCTGAGACCATGGCACTGAGCCTTCAGCCCCGGACCAGAGGGGTTAGCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000559664.5
ENST00000561080.5
ENST00000675289.1
ENST00000676379.1
CDS GCA 72 bp TTCCCTCCCCGCTTGTTCCTCATTCGAGGTGAACCTTaGGAAGAGAAGCCCGGGGGTGCAGTGAGAGGGCGG +
Preference number: 6 (lower is better)
Translates to: FPPRLFLIRGEP*EEKPGGAVRGR
Trigger: CCGCCCTCTCACTGCACCCCCGGGCTTCTCTTCGCAAGGTTCACCTCGAATGAGGAACAAGCGGGGAGGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561080.5
CDS CCA 72 bp GCGGATCAAGACACCTCGGACTGCAGCTCAGAGTCGTaGCAAGTCGTAGCTAGTCCACTGAGCCACGGTCCG +
Preference number: 6 (lower is better)
Translates to: ADQDTSDCSSES*QVVASPLSHGP
Trigger: CGGACCGTGGCTCAGTGGACTAGCTACGACTTGCCACGACTCTGAGCTGCAGTCCGAGGTGTCTTGATCCGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000558589.5
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS CCA 72 bp GCCCGCTCTTCTCCTAGCAGAAAGGTCCTCGGGGTCTaGGAGGAGGTTAGCGGATCAAGACACCTCGGACTG +
Preference number: 6 (lower is better)
Translates to: ARSSPSRKVLGV*EEVSGSRHLGL
Trigger: CAGTCCGAGGTGTCTTGATCCGCTAACCTCCTCCCAGACCCCGAGGACCTTTCTGCTAGGAGAAGAGCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000558589.5
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS CCA 72 bp GATGACATCCTGGGGGTGAGAAGTCCGGTCACTGGGTaGATCCAGTGCAACAGTTGCCAGCGAAGTGGTGGC +
Preference number: 6 (lower is better)
Translates to: DDILGVRSPVTG*IQCNSCQRSGG
Trigger: GCCACCACTTCGCTGGCAACTGTTGCACTGGATCCACCCAGTGACCGGACTTCTCACCCCCAGGATGTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558589.5
ENST00000558667.5
ENST00000559236.5
ENST00000559484.1
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
ENST00000561120.5
ENST00000675289.1
ENST00000676379.1
CDS TCA 72 bp CCAATAAAAGTCTTCCAAGCGCGGGCATCTTCGCTTTaGCGCCAGCCATTAGGCCAGCCCATCACCACCGTG +
Preference number: 6 (lower is better)
Translates to: PIKVFQARASSL*RQPLGQPITTV
Trigger: CACGGTGGTGATGGGCTGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCGCGCTTGGAAGACTTTTATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558589.5
ENST00000558667.5
ENST00000558950.1
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
ENST00000676379.1
CDS TCA 72 bp GCAATAAAAGTCTTCCAAGCGCGGGCATCTTCGCTTTaGCGCCAGCCATTAGGCCAGCCCATCACCACCGTG +
Preference number: 6 (lower is better)
Translates to: AIKVFQARASSL*RQPLGQPITTV
Trigger: CACGGTGGTGATGGGCTGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCGCGCTTGGAAGACTTTTATTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS GCA 72 bp TCTGGGAGGAGGTTAGCGGATCAAGACACCTCGGACTaGAGCTCAGAGTCGTGGCAAGTCGTAGCTAGTCCA +
Preference number: 6 (lower is better)
Translates to: SGRRLADQDTSD*SSESWQVVASP
Trigger: TGGACTAGCTACGACTTGCCACGACTCTGAGCTGCAGTCCGAGGTGTCTTGATCCGCTAACCTCCTCCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000354181.8
ENST00000458406.6
ENST00000558589.5
ENST00000559523.5
ENST00000559664.5
ENST00000561080.5
CDS GCA 72 bp AGAAGTCCGGTCACTGGGTGGATCCAGTGCAACAGTTaGCAGCGAAGTGGTGGCCCCAGACATCTCACTCAT +
Preference number: 6 (lower is better)
Translates to: RSPVTGWIQCNS*QRSGGPRHLTH
Trigger: ATGAGTGAGATGTCTGGGGCCACCACTTCGCTGGCAACTGTTGCACTGGATCCACCCAGTGACCGGACTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558589.5
ENST00000558667.5
ENST00000559236.5
ENST00000559484.1
ENST00000559523.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
ENST00000561120.5
ENST00000675289.1
ENST00000676379.1
CDS CAA 72 bp GCCAATAAAAGTCTTCCAAGCGCGGGCATCTTCGCTTaGACGCCAGCCATTAGGCCAGCCCATCACCACCGT +
Preference number: 6 (lower is better)
Translates to: ANKSLPSAGIFA*TPAIRPAHHHR
Trigger: ACGGTGGTGATGGGCTGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCGCGCTTGGAAGACTTTTATTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558589.5
ENST00000558667.5
ENST00000558950.1
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
ENST00000676379.1
CDS TCA 72 bp CTTCCTCCAATCGAAGCAAAGCAAACCGGGCTGCACTaGGGGACAGCCCACGGATACCATCACCCCATTCTT +
Preference number: 6 (lower is better)
Translates to: LPPIEAKQTGLH*GTAHGYHHPIL
Trigger: AAGAATGGGGTGATGGTATCCGTGGGCTGTCCCTCAGTGCAGCCCGGTTTGCTTTGCTTCGATTGGAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558589.5
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560023.1
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
ENST00000676379.1
CDS TCA 72 bp TTCTTATGTCCGTCGTCCTCGATGACATCCTGGGGGTaGGAAGTCCGGTCACTGGGTGGATCCAGTGCAACA +
Preference number: 6 (lower is better)
Translates to: FLCPSSSMTSWG*EVRSLGGSSAT
Trigger: TGTTGCACTGGATCCACCCAGTGACCGGACTTCTCACCCCCAGGATGTCATCGAGGACGACGGACATAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397707.6
CDS CAA 72 bp TGCAATAAAAGTCTTCCAAGCGCGGGCATCTTCGCTTaGACGCCAGCCATTAGGCCAGCCCATCACCACCGT +
Preference number: 6 (lower is better)
Translates to: CNKSLPSAGIFA*TPAIRPAHHHR
Trigger: ACGGTGGTGATGGGCTGGCCTAATGGCTGGCGTCAAAGCGAAGATGCCCGCGCTTGGAAGACTTTTATTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000559664.5
ENST00000561080.5
CDS CCA 72 bp GGGCCCAATGGTAGTAGCGGAATCGGGGTCTCCAGTTaGGTGTTCGAAGTAATGTTTGCAAGGCACATGCCA +
Preference number: 6 (lower is better)
Translates to: GPNGSSGIGVSS*VFEVMFARHMP
Trigger: TGGCATGTGCCTTGCAAACATTACTTCGAACACCCAACTGGAGACCCCGATTCCGCTACTACCATTGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558589.5
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560023.1
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
ENST00000675289.1
ENST00000676379.1
CDS CAA 72 bp TTTGTCGGTGTCACCATGAACCGAACTGAAGCCATCTaGGTGGTGGTTTCTTGCGAAGAGAAGCCCGGGGGT +
Preference number: 6 (lower is better)
Translates to: FVGVTMNRTEAI*VVVSCEEKPGG
Trigger: ACCCCCGGGCTTCTCTTCGCAAGAAACCACCACCAAGATGGCTTCAGTTCGGTTCATGGTGACACCGACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561120.5
CDS TCA 72 bp CTTACGCTAGCTACTTTTGAACTACTGAGAGAAGGGTaGGCAGAGGAGGATGCAGGGGCAGAGCGGATTCCT +
Preference number: 6 (lower is better)
Translates to: LTLATFELLREG*AEEDAGAERIP
Trigger: AGGAATCCGCTCTGCCCCTGCATCCTCCTCTGCTCACCCTTCTCTCAGTAGTTCAAAAGTAGCTAGCGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000354181.8
CDS GCA 72 bp GCTGGGAAAGAAGGAGATGTTTTTAGCCACCAGCAGTaGAAGATGGGCAGCAGTTGTCACTCGAACTGTGCC +
Preference number: 6 (lower is better)
Translates to: AGKEGDVFSHQQ*KMGSSCHSNCA
Trigger: GGCACAGTTCGAGTGACAACTGCTGCCCATCTTGCACTGCTGGTGGCTAAAAACATCTCCTTCTTTCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558589.5
ENST00000558667.5
ENST00000558950.1
ENST00000559441.1
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
ENST00000676379.1
CDS CCA 72 bp TGCGTGCAGGCAAACCTTTATCAGGCGACTATAGCGTaGATCAGATTGCTAAAAGGTGTACACCCGGCCACC +
Preference number: 6 (lower is better)
Translates to: CVQANLYQATIA*IRLLKGVHPAT
Trigger: GGTGGCCGGGTGTACACCTTTTAGCAATCTGATCCACGCTATAGTCGCCTGATAAAGGTTTGCCTGCACGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559664.5
ENST00000561080.5
ENST00000675289.1
ENST00000676379.1
CDS CAA 72 bp CAAAGCCACCCGGTGTTTTTGATGTCGACAATCCACTaGGGTCTGGTGGGAAAGGTGCACATGCATAACGGG +
Preference number: 6 (lower is better)
Translates to: QSHPVFLMSTIH*GLVGKVHMHNG
Trigger: CCCGTTATGCATGTGCACCTTTCCCACCAGACCCAAGTGGATTGTCGACATCAAAAACACCGGGTGGCTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000559664.5
ENST00000561080.5
ENST00000675289.1
ENST00000676379.1
CDS TCA 72 bp GGAACTAGATCGAGAGCTGAGGTCCGGACTGGTGTCTaGCAAACCTGGAATGTCATCGATCTTTGTCGGTGT +
Preference number: 6 (lower is better)
Translates to: GTRSRAEVRTGV*QTWNVIDLCRC
Trigger: ACACCGACAAAGATCGATGACATTCCAGGTTTGTCAGACACCAGTCCGGACCTCAGCTCTCGATCTAGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558589.5
ENST00000558667.5
ENST00000559236.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
ENST00000561120.5
ENST00000675289.1
ENST00000676379.1
CDS CCA 72 bp AAGAAGGAGATGTTTTTAGCCACCAGCAGTGCAAGATaGGCAGCAGTTGTCACTCGAACTGTGCCTAGGGAG +
Preference number: 6 (lower is better)
Translates to: KKEMFLATSSAR*AAVVTRTVPRE
Trigger: CTCCCTAGGCACAGTTCGAGTGACAACTGCTGCCCATCTTGCACTGCTGGTGGCTAAAAACATCTCCTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559441.1
CDS CAA 90 bp TGCGTGCAGGCAAACCTTTATCAGGCGACTATAGCGTGGATCAGATaGCTAAAAGGTGTACACCCGGCCACCTGTTGTGTATCAGGTGAA +
Preference number: 6 (lower is better)
Translates to: CVQANLYQATIAWIR*LKGVHPATCCVSGE
Trigger: TTCACCTGATACACAACAGGTGGCCGGGTGTACACCTTTTAGCAATCTGATCCACGCTATAGTCGCCTGATAAAGGTTTGCCTGCACGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559664.5
ENST00000561080.5
ENST00000675289.1
ENST00000676379.1
CDS CAA 72 bp TGGCCAAAAACCCTCAGAAACGGTATGATGTTATCCTaGGCAATAGCTTGTAGCAGCCTCGGTGCACCTGTG +
Preference number: 6 (lower is better)
Translates to: WPKTLRNGMMLS*AIACSSLGAPV
Trigger: CACAGGTGCACCGAGGCTGCTACAAGCTATTGCCAAGGATAACATCATACCGTTTCTGAGGGTTTTTGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558589.5
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
ENST00000675289.1
ENST00000676379.1
CDS TCA 72 bp TATGTCCGTCGTCTAACAGTTGGCTGTGTTCCCCTGTaGTGGAGTTCTGACTCAGGTCTGGTTCATCTGAAT +
Preference number: 6 (lower is better)
Translates to: YVRRLTVGCVPL*WSSDSGLVHLN
Trigger: ATTCAGATGAACCAGACCTGAGTCAGAACTCCATCACAGGGGAACACAGCCAACTGTTAGACGACGGACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000290209.9
CDS TCA 72 bp TGGAAAGAATTGGGGCCACAAGATCCAGGGAGGCAATaGGTATTCCAAGCTCTGCAATGGCAGCAGTTAGAA +
Preference number: 6 (lower is better)
Translates to: WKELGPQDPGRQ*VFQALQWQQLE
Trigger: TTCTAACTGCTGCCATTGCAGAGCTTGGAATACTCATTGCCTCCCTGGATCTTGTGGCCCCAATTCTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558589.5
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
ENST00000675289.1
ENST00000676379.1
CDS TCA 72 bp AACCTGGAATGTCATCGATCTTTGTCGGTGTCACCATaGACCGAACTGAAGCCATCTTGGTGGTGGTTTCTG +
Preference number: 6 (lower is better)
Translates to: NLECHRSLSVSP*TELKPSWWWFL
Trigger: CAGAAACCACCACCAAGATGGCTTCAGTTCGGTTCATGGTGACACCGACAAAGATCGATGACATTCCAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000558667.5
ENST00000559236.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
ENST00000675289.1
ENST00000676379.1
CDS TCA 72 bp GTCATCGATCTTTGTCGGTGTCACCATGAACCGAACTaGAGCCATCTTGGTGGTGGTTTCTTGCGAAGAGAA +
Preference number: 6 (lower is better)
Translates to: VIDLCRCHHEPN*SHLGGGFLRRE
Trigger: TTCTCTTCGCAAGAAACCACCACCAAGATGGCTTCAGTTCGGTTCATGGTGACACCGACAAAGATCGATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561120.5
CDS GCA 72 bp CGACAATCCACTTGGGTCTGGTGGGAAAGGTGCACATaGATAACGGGAAAAATAACCCACACTACTGAGAGA +
Preference number: 6 (lower is better)
Translates to: RQSTWVWWERCT*ITGKITHTTER
Trigger: TCTCTCAGTAGTGTGGGTTATTTTTCCCGTTATGCATGTGCACCTTTCCCACCAGACCCAAGTGGATTGTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000559664.5
ENST00000561080.5
ENST00000675289.1
ENST00000676379.1
CDS CAA 72 bp GCAAACCTTTATCAGGCGACTATAGCGTGGATCAGATaGCTAAAAGGTGTACACCCGGCCACCTGTTGTGTA +
Preference number: 6 (lower is better)
Translates to: ANLYQATIAWIR*LKGVHPATCCV
Trigger: TACACAACAGGTGGCCGGGTGTACACCTTTTAGCAATCTGATCCACGCTATAGTCGCCTGATAAAGGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000559664.5
ENST00000561080.5
ENST00000675289.1
ENST00000676379.1
CDS CAA 90 bp TCTGCAATGGCAGCAGTTAGAAGTAAAGCCCAGGTAGGTTCCCCATaGGCTTTGCTGTGGCCAAAAACCCTCAGAAACGGTATGATGTTA +
Preference number: 6 (lower is better)
Translates to: SAMAAVRSKAQVGSP*ALLWPKTLRNGMML
Trigger: TAACATCATACCGTTTCTGAGGGTTTTTGGCCACAGCAAAGCCAATGGGGAACCTACCTGGGCTTTACTTCTAACTGCTGCCATTGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558589.5
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
ENST00000675289.1
ENST00000676379.1
CDS CAA 90 bp AGGTGTATGCAAAGCCACCCGGTGTTTTTGATGTCGACAATCCACTaGGGTCTGGTGGGAAAGGTGCACATGCATAACGGGAAAAATAAC +
Preference number: 6 (lower is better)
Translates to: RCMQSHPVFLMSTIH*GLVGKVHMHNGKNN
Trigger: GTTATTTTTCCCGTTATGCATGTGCACCTTTCCCACCAGACCCAAGTGGATTGTCGACATCAAAAACACCGGGTGGCTTTGCATACACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000559664.5
ENST00000561080.5
ENST00000675289.1
ENST00000676379.1
CDS CAA 90 bp TCATCGATCTTTGTCGGTGTCACCATGAACCGAACTGAAGCCATCTaGGTGGTGGTTTCTGGAGGATGCATTTTGTTCTTGCGAAGAGAA +
Preference number: 6 (lower is better)
Translates to: SSIFVGVTMNRTEAI*VVVSGGCILFLRRE
Trigger: TTCTCTTCGCAAGAACAAAATGCATCCTCCAGAAACCACCACCAAGATGGCTTCAGTTCGGTTCATGGTGACACCGACAAAGATCGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558667.5
CDS TCA 72 bp TCTAACAGTTGGCTGTGTTCCCCTGTGATGGAGTTCTaGCTCAGGTATTACATTTCCTGGAGTGATCACAGG +
Preference number: 6 (lower is better)
Translates to: SNSWLCSPVMEF*LRYYISWSDHR
Trigger: CCTGTGATCACTCCAGGAAATGTAATACCTGAGTCAGAACTCCATCACAGGGGAACACAGCCAACTGTTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560164.5
CDS TCA 72 bp TATGTCCGTCGTCTAACAGTTGGCTGTGTTCCCCTGTaGTGGAGTTCTGACTCAGGTATTACATTTCCTGGA +
Preference number: 6 (lower is better)
Translates to: YVRRLTVGCVPL*WSSDSGITFPG
Trigger: TCCAGGAAATGTAATACCTGAGTCAGAACTCCATCACAGGGGAACACAGCCAACTGTTAGACGACGGACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560164.5
CDS TCA 72 bp AACCTGGAATGTCATCGATCTTTGTCGGTGTCACCATaGACCGAACTGAAGCCATCTTGGTGGTGGTTTCTT +
Preference number: 6 (lower is better)
Translates to: NLECHRSLSVSP*TELKPSWWWFL
Trigger: AAGAAACCACCACCAAGATGGCTTCAGTTCGGTTCATGGTGACACCGACAAAGATCGATGACATTCCAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561120.5
CDS TCA 72 bp GTCATCGATCTTTGTCGGTGTCACCATGAACCGAACTaGAGCCATCTTGGTGGTGGTTTACTACTGAGAGAA +
Preference number: 6 (lower is better)
Translates to: VIDLCRCHHEPN*SHLGGGLLLRE
Trigger: TTCTCTCAGTAGTAAACCACCACCAAGATGGCTTCAGTTCGGTTCATGGTGACACCGACAAAGATCGATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558589.5
CDS TCA 72 bp AACCTGGAATGTCATCGATCTTTGTCGGTGTCACCATaGACCGAACTGAAGCCATCTTGGTGGTGGTTTACT +
Preference number: 6 (lower is better)
Translates to: NLECHRSLSVSP*TELKPSWWWFT
Trigger: AGTAAACCACCACCAAGATGGCTTCAGTTCGGTTCATGGTGACACCGACAAAGATCGATGACATTCCAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558589.5
CDS CAA 72 bp TTTGTCGGTGTCACCATGAACCGAACTGAAGCCATCTaGGTGGTGGTTTCTGGAGGATGCATTTTGTTCTTG +
Preference number: 6 (lower is better)
Translates to: FVGVTMNRTEAI*VVVSGGCILFL
Trigger: CAAGAACAAAATGCATCCTCCAGAAACCACCACCAAGATGGCTTCAGTTCGGTTCATGGTGACACCGACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558667.5
CDS CCA 72 bp AAGAAGGAGATGTTTTTAGCCACCAGCAGTGCAAGATaGGCAGCAGTTGTCACTCGAACTGTGCCAATAAAA +
Preference number: 6 (lower is better)
Translates to: KKEMFLATSSAR*AAVVTRTVPIK
Trigger: TTTTATTGGCACAGTTCGAGTGACAACTGCTGCCCATCTTGCACTGCTGGTGGCTAAAAACATCTCCTTCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558589.5
ENST00000558667.5
ENST00000558950.1
ENST00000559523.5
ENST00000560164.5
ENST00000560611.5
ENST00000676379.1
CDS CAA 72 bp TTTGTCGGTGTCACCATGAACCGAACTGAAGCCATCTaGGTGGTGGTTTCTGGAGGATGCATTTTGTTCTTT +
Preference number: 6 (lower is better)
Translates to: FVGVTMNRTEAI*VVVSGGCILFF
Trigger: AAAGAACAAAATGCATCCTCCAGAAACCACCACCAAGATGGCTTCAGTTCGGTTCATGGTGACACCGACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000354181.8
ENST00000397707.6
ENST00000559236.5
ENST00000559664.5
ENST00000560611.5
ENST00000561080.5
ENST00000675289.1
ENST00000676379.1
CDS TCA 72 bp AGGATGGCAAGGATAGTACCAATCGGAATAGACTTCTaGGCATCTTTCAGATCTCCAGATCTGTTTGATCCA +
Preference number: 6 (lower is better)
Translates to: RMARIVPIGIDF*ASFRSPDLFDP
Trigger: TGGATCAAACAGATCTGGAGATCTGAAAGATGCTCAGAAGTCTATTCCGATTGGTACTATCCTTGCCATCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558589.5
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
ENST00000675289.1
ENST00000676379.1
CDS CAA 72 bp TATTCATGGTTTAAGCTGCCTAAGACATCAGAAGATTaGGCTGAAGGCTTTTCGATGATCTCTCCCTTGGGT +
Preference number: 6 (lower is better)
Translates to: YSWFKLPKTSED*AEGFSMISPLG
Trigger: ACCCAAGGGAGAGATCATCGAAAAGCCTTCAGCCAAATCTTCTGATGTCTTAGGCAGCTTAAACCATGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558589.5
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
ENST00000675289.1
ENST00000676379.1
CDS CAA 90 bp AAGAATCCCCATAACTTTGATGGGACTGTCATGTTGTTAATTTCCTaGGTCTTAGAGCAAACGTCAATGTGTCTTGATGAAAGGGTGCGG +
Preference number: 6 (lower is better)
Translates to: KNPHNFDGTVMLLIS*VLEQTSMCLDERVR
Trigger: CCGCACCCTTTCATCAAGACACATTGACGTTTGCTCTAAGACCAAGGAAATTAACAACATGACAGTCCCATCAAAGTTATGGGGATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558589.5
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
ENST00000675289.1
ENST00000676379.1
CDS CAA 72 bp AAAAAGAATAAGCAGAGAAGAATCCTTAGGCTTGCCTaGCTTCCTAGCATGTCAGGAAAGCAAGGAAATGCT +
Preference number: 6 (lower is better)
Translates to: KKNKQRRILRLA*LPSMSGKQGNA
Trigger: AGCATTTCCTTGCTTTCCTGACATGCTAGGAAGCAAGGCAAGCCTAAGGATTCTTCTCTGCTTATTCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000559441.1
CDS CAA 90 bp CTCGAGTTACAGAAGAATCCCCATAACTTTGATGGGACTGTCATGTaGTTAATTTCCTTGGTCTTAGAGCAAACGTCAATGTGTCTTGAT +
Preference number: 6 (lower is better)
Translates to: LELQKNPHNFDGTVM*LISLVLEQTSMCLD
Trigger: ATCAAGACACATTGACGTTTGCTCTAAGACCAAGGAAATTAACAACATGACAGTCCCATCAAAGTTATGGGGATTCTTCTGTAACTCGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558589.5
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
ENST00000675289.1
ENST00000676379.1
CDS CAA 90 bp AACACATATTTTTGTGTGTTAACCATGTGCCAAATACTGCTAGTGTaGATTTCTTTACCTCCAGTTTTTAGTGTGTGGAGGTCCTTCCTC +
Preference number: 6 (lower is better)
Translates to: NTYFCVLTMCQILLV*ISLPPVFSVWRSFL
Trigger: GAGGAAGGACCTCCACACACTAAAAACTGGAGGTAAAGAAATCAACACTAGCAGTATTTGGCACATGGTTAACACACAAAAATATGTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000560023.1
CDS CAA 72 bp GTCAGGAAAGCAAGGAAATGCTCTTTTCACACTTCTTaGAGCAAGGGGTCCTATTTACTTAGTAGGTTATTT +
Preference number: 6 (lower is better)
Translates to: VRKARKCSFHTS*SKGSYLLSRLF
Trigger: AAATAACCTACTAAGTAAATAGGACCCCTTGCTCAAAGAAGTGTGAAAAGAGCATTTCCTTGCTTTCCTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000559441.1
CDS CAA 72 bp CATAACTTTGATGGGACTGTCATGTTGTTAATTTCCTaGGTCTTAGAGCAAACGTCAATGTGTCTTGATGAA +
Preference number: 6 (lower is better)
Translates to: HNFDGTVMLLIS*VLEQTSMCLDE
Trigger: TTCATCAAGACACATTGACGTTTGCTCTAAGACCAAGGAAATTAACAACATGACAGTCCCATCAAAGTTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000290209.9
ENST00000354181.8
ENST00000397702.6
ENST00000397707.6
ENST00000458406.6
ENST00000558589.5
ENST00000558667.5
ENST00000559523.5
ENST00000559664.5
ENST00000560164.5
ENST00000560611.5
ENST00000561080.5
ENST00000675289.1
ENST00000676379.1
CDS TCA 72 bp AGAATAGTTCAAAACAGGTCCATTATACCAATTCCTTaGGCCACATATGGTTTCCTTATCCTAAAATCAACA +
Preference number: 6 (lower is better)
Translates to: RIVQNRSIIPIP*ATYGFLILKST
Trigger: TGTTGATTTTAGGATAAGGAAACCATATGTGGCTCAAGGAATTGGTATAATGGACCTGTTTTGAACTATTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560023.1