RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLAIN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000139737

Ensembl transcript IDs: ENST00000267219.12, ENST00000314070.9, ENST00000351546.7, ENST00000358679.3, ENST00000377236.2, ENST00000418532.6, ENST00000422114.5, ENST00000441784.5, ENST00000442759.5, ENST00000446759.5, ENST00000462234.5, ENST00000465831.1, ENST00000466548.5, ENST00000474663.5, ENST00000488699.5, ENST00000496045.5

Found 355 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTTTAGTCTCTGGTGACTaGTCCATTGAGAAACAATGC +
Preference number: 2 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVLVSGD*SIEKQC
Trigger: GCATTGTTTCTCAATGGACCAGTCACCAGAGACTAA...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
3UTR-3UTR CCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGTTAGTCTCTGGTGACTaGTCCATTGAGAAACAATGC +
Preference number: 2 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMLVSGD*SIEKQC
Trigger: GCATTGTTTCTCAATGGACCAGTCACCAGAGACTAA...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
3UTR-3UTR TCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGCTGCAACCATGGGTTTaGGAATGTTGCAGTATCTCA +
Preference number: 2 (lower is better)
Translates to: LKINCGTVANIAGIKCNELQPWV*ECCSIS
Trigger: TGAGATACTGCAACATTCTCAAACCCATGGTTGCAG...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
3UTR-3UTR CCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGTTAGTCTCTGGTGACTaGTCCATTGAGAAACAATGC +
Preference number: 2 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKLVSGD*SIEKQC
Trigger: GCATTGTTTCTCAATGGACCAGTCACCAGAGACTAA...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
3UTR-3UTR CCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAATTAGTCTCTGGTGACTaGTCCATTGAGAAACAATGC +
Preference number: 2 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQLVSGD*SIEKQC
Trigger: GCATTGTTTCTCAATGGACCAGTCACCAGAGACTAA...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
3UTR-3UTR CCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGTTAGTCTCTGGTGACTaGTCCATTGAGAAACAATGC +
Preference number: 2 (lower is better)
Translates to: LKINCGTVANIAGIKCNELVSGD*SIEKQC
Trigger: GCATTGTTTCTCAATGGACCAGTCACCAGAGACTAA...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
3UTR CAA 90 bp CAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTaGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGTGCAATAAT +
Preference number: 2 (lower is better)
Translates to: QKLPRSKCHNTATMG*RMLQYLRQIFKCNN
Trigger: ATTATTGCACTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
3UTR-3UTR GCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGGTTATCTCCTTGCAATaGTTCAAATTATGTTGTGCT +
Preference number: 2 (lower is better)
Translates to: LKINCGTVANIAGIKCNEVISLQ*FKLCCA
Trigger: AGCACAACATAATTTGAAGCATTGCAAGGAGATAAC...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
3UTR-3UTR CAA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGCTGGTGACTGGTCCATaGAGAAACAATGCAGTAAAT +
Preference number: 3 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMLVTGP*RNNAVN
Trigger: ATTTACTGCATTGTTTCTCAATGGACCAGTCACCAG...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
3UTR-3UTR CAA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTCTGGTGACTGGTCCATaGAGAAACAATGCAGTAAAT +
Preference number: 3 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVLVTGP*RNNAVN
Trigger: ATTTACTGCATTGTTTCTCAATGGACCAGTCACCAG...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
3UTR-3UTR CAA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAACTGGTGACTGGTCCATaGAGAAACAATGCAGTAAAT +
Preference number: 3 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQLVTGP*RNNAVN
Trigger: ATTTACTGCATTGTTTCTCAATGGACCAGTCACCAG...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
3UTR-3UTR CAA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTCTGGTGACTGGTCCATaGAGAAACAATGCAGTAAAT +
Preference number: 3 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTLVTGP*RNNAVN
Trigger: ATTTACTGCATTGTTTCTCAATGGACCAGTCACCAG...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
3UTR-3UTR CAA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGCTGGTGACTGGTCCATaGAGAAACAATGCAGTAAAT +
Preference number: 3 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKLVTGP*RNNAVN
Trigger: ATTTACTGCATTGTTTCTCAATGGACCAGTCACCAG...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
3UTR-3UTR CAA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGACTGCAACCATGGGTTaGAGAATGTTGCAGTATCTC +
Preference number: 3 (lower is better)
Translates to: LKINCGTVANIAGIKCNETATMG*RMLQYL
Trigger: GAGATACTGCAACATTCTCAAACCCATGGTTGCAGT...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
3UTR-3UTR CAA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTATGGGTTTGAGAATGTaGCAGTATCTCAGGCAAATA +
Preference number: 3 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTMGLRM*QYLRQI
Trigger: TATTTGCCTGAGATACTGCAACATTCTCAAACCCAT...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
3UTR-3UTR CAA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAATGGGTTTGAGAATGTaGCAGTATCTCAGGCAAATA +
Preference number: 3 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQMGLRM*QYLRQI
Trigger: TATTTGCCTGAGATACTGCAACATTCTCAAACCCAT...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
3UTR TCA 72 bp CTAGATCTAAGTGTCACAATACTGCAACCATGGGTTTaGGAATGTTGCAGTATCTCAGGCAAATATTTAAGT +
Preference number: 3 (lower is better)
Translates to: LDLSVTILQPWV*ECCSISGKYLS
Trigger: ACTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATTGTGACACTTAGATCTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
3UTR-3UTR CAA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAGGCACAAAATTTAAGTaGTTCCATAGTGGTTCACAT +
Preference number: 3 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQGTKFK*FHSGSH
Trigger: ATGTGAACCACTATGGAACAACTTAAATTTTGTGCC...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
3UTR-3UTR CAA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGTGTCTGGTTATCTCCTaGCAATGCTTCAAATTATGT +
Preference number: 3 (lower is better)
Translates to: LKINCGTVANIAGIKCNECLVIS*QCFKLC
Trigger: ACATAATTTGAAGCATTGCAAGGAGATAACCAGACA...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGTGGCTGCGCCAGGCTaGAAAGCAGGGAGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMVAAPG*KAGRAR
Trigger: CCGCGCCCTCCCTGCTTTGCAGCCTGGCGCAGCCAC...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGCGCCTCGGGTGGCTaGGCCAGGCTGCAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMGASGG*ARLQSR
Trigger: CCTGCTTTGCAGCCTGGCGCAGCCACCCGAGGCGCC...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGAGCCCGCTCCAGAGCTaGCCCCTGCCGAGGCGCATT +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMSPLQS*PLPRRI
Trigger: AATGCGCCTCGGCAGGGGTCAGCTCTGGAGCGGGCT...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAATGGAGCCACCGCCGCTaGCACTACCGCTGCCGCCAC +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQWSHRR*HYRCRH
Trigger: GTGGCGGCAGCGGTAGTGGCAGCGGCGGTGGCTCCA...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000418532.6
CDS-3UTR GCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGGTGGCTGCGCCAGGCTaGAAAGCAGGGAGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKVAAPG*KAGRAR
Trigger: CCGCGCCCTCCCTGCTTTGCAGCCTGGCGCAGCCAC...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGGGCGCCTCGGGTGGCTaGGCCAGGCTGCAAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNEGASGG*ARLQSR
Trigger: CCTGCTTTGCAGCCTGGCGCAGCCACCCGAGGCGCC...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAGAAGGGCGCCTCGGGTaGCTGCGCCAGGCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQEGRLG*LRQAAK
Trigger: CTTTGCAGCCTGGCGCAGCCACCCGAGGCGCCCTTC...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGAGCCCGCTCCAGAGCTaGCCCCTGCCGAGGCGCATT +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNESPLQS*PLPRRI
Trigger: AATGCGCCTCGGCAGGGGTCAGCTCTGGAGCGGGCT...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGAGCCTGCTGCCGGCTTaGAGTAGACGAAGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMSLLPA*SRRRAP
Trigger: AGGCGCCCTTCGTCTACTTCAAGCCGGCAGCAGGCT...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGGAAGGGCGCCTCGGGTaGCTGCGCCAGGCTGCAAAG +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNEEGRLG*LRQAAK
Trigger: CTTTGCAGCCTGGCGCAGCCACCCGAGGCGCCCTTC...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGAGCCTGCTGCCGGCTTaGAGTAGACGAAGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKSLLPA*SRRRAP
Trigger: AGGCGCCCTTCGTCTACTTCAAGCCGGCAGCAGGCT...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTCGCAGCTGCTCGTTCTaGTTCTCCAGCTTGCGCACC +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVRSCSF*FSSLRT
Trigger: GGTGCGCAAGCTGGAGAAGCAGAACGAGCAGCTGCG...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGCGCGCCGAAGAAGCCTaGTGCCGGCTTGAAGTAGAC +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMRAEEA*CRLEVD
Trigger: GTCTACTTCAAGCCGGCAGCAGGCTTCTTCGGCGCG...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGCTGTGGACCCTGTGTTaGAGCTGTCCCGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMLWTLC*SCPGDG
Trigger: TCCATCACCGGGACAGCTTCAACACAGGGTCCACAG...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAGAGGCGCATTTCACCTaGTCCGCCATCATCGTGGGC +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQEAHFT*SAIIVG
Trigger: GCCCACGATGATGGCGGAGCAGGTGAAATGCGCCTC...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGTCCAGAGCTGACCCCTaGCGAGGCGCATTTCACCTG +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKSRADP*RGAFHL
Trigger: CAGGTGAAATGCGCCTCGGCAGGGGTCAGCTCTGGA...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTCGCGCCGAAGAAGCCTaGTGCCGGCTTGAAGTAGAC +
Preference number: 4 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTRAEEA*CRLEVD
Trigger: GTCTACTTCAAGCCGGCAGCAGGCTTCTTCGGCGCG...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTCTGTCGATAGATGACTaGGGACTGAGTGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVLSIDD*GLSGEP
Trigger: GGGCTCCCCACTCAGTCCCCAGTCATCTATCGACAG...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGCTGTCGATAGATGACTaGGGACTGAGTGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMLSIDD*GLSGEP
Trigger: GGGCTCCCCACTCAGTCCCCAGTCATCTATCGACAG...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTCTCACTGTCGATAGATaGCTGGGGACTGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVLTVDR*LGTEWG
Trigger: TCCCCACTCAGTCCCCAGTCATCTATCGACAGTGAG...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGCTCACTGTCGATAGATaGCTGGGGACTGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMLTVDR*LGTEWG
Trigger: TCCCCACTCAGTCCCCAGTCATCTATCGACAGTGAG...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAACTGTGGACCCTGTGTTaGAGCTGTCCCGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQLWTLC*SCPGDG
Trigger: TCCATCACCGGGACAGCTTCAACACAGGGTCCACAG...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGCTGTGGACCCTGTGTTaGAGCTGTCCCGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKLWTLC*SCPGDG
Trigger: TCCATCACCGGGACAGCTTCAACACAGGGTCCACAG...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTCTGTGGACCCTGTGTTaGAGCTGTCCCGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTLWTLC*SCPGDG
Trigger: TCCATCACCGGGACAGCTTCAACACAGGGTCCACAG...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGCAGGGAACGTCTCGCTaGTTCCATCTCAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMQGTSR*FHLRSW
Trigger: CCAACTCCTGAGATGGAAGCAGCGAGACGTTCCCTG...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267219.12
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTCAGGGAACGTCTCGCTaGTTCCATCTCAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVQGTSR*FHLRSW
Trigger: CCAACTCCTGAGATGGAAGCAGCGAGACGTTCCCTG...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267219.12
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTCGAAGGTCTTGGGAGTaGACTGCGACCCATTATCCC +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVRRSWE*TATHYP
Trigger: GGGATAATGGGTCGCAGTGCACTCCCAAGACCTTCG...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGAGCTGATCTGCACATaGTCAGTGCGTCCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMELICT*SVRPSS
Trigger: ACTGGAGGGACGCACTGAGCATGTGCAGATCAGCTC...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418532.6
CDS-3UTR GCA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTACCACCGAGCTGATCTaGACATGCTCAGTGCGTCCC +
Preference number: 4 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTTTELI*TCSVRP
Trigger: GGGACGCACTGAGCATGTGCAGATCAGCTCGGTGGT...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000418532.6
CDS-3UTR GCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGTCCAGAGCTGACCCCTaGCGAGGCGCATTTCACCTG +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNESRADP*RGAFHL
Trigger: CAGGTGAAATGCGCCTCGGCAGGGGTCAGCTCTGGA...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTGCCGAAGAAGCCTGCTaGCGGCTTGAAGTAGACGAA +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVAEEAC*RLEVDE
Trigger: TTCGTCTACTTCAAGCCGGCAGCAGGCTTCTTCGGC...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAACTGTCGATAGATGACTaGGGACTGAGTGGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQLSIDD*GLSGEP
Trigger: GGGCTCCCCACTCAGTCCCCAGTCATCTATCGACAG...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTCTGTCGGATAGACACTaGGAAATGCCCCACGCTGTG +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVLSDRH*EMPHAV
Trigger: CACAGCGTGGGGCATTTCCCAGTGTCTATCCGACAG...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGCTGCCTTGAACGGTTaGACTCACATAGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMAALNG*THIGCG
Trigger: GCCACAGCCTATGTGAGTCCAACCGTTCAAGGCAGC...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTGCTGCCTTGAACGGTTaGACTCACATAGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVAALNG*THIGCG
Trigger: GCCACAGCCTATGTGAGTCCAACCGTTCAAGGCAGC...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGTGCCAACGAAGGTCTTaGGAGTGCACTGCGACCCAT +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMCQRRS*ECTATH
Trigger: ATGGGTCGCAGTGCACTCCCAAGACCTTCGTTGGCA...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAACTCACTGTCGATAGATaGCTGGGGACTGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQLTVDR*LGTEWG
Trigger: TCCCCACTCAGTCCCCAGTCATCTATCGACAGTGAG...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTCTCACTGTCGATAGATaGCTGGGGACTGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTLTVDR*LGTEWG
Trigger: TCCCCACTCAGTCCCCAGTCATCTATCGACAGTGAG...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGCTGTGGACCCTGTGTTaGAGCTGTCCCGGTGATGGA +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNELWTLC*SCPGDG
Trigger: TCCATCACCGGGACAGCTTCAACACAGGGTCCACAG...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGCTGGAGAGAAATGCCTaGACCTCCCCCTCTGCCTGT +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNELERNA*TSPSAC
Trigger: ACAGGCAGAGGGGGAGGTTCAGGCATTTCTCTCCAG...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000351546.7
CDS-3UTR GCA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTATAGACACTGGGAAATaGCCCACGCTGTGGACCCTG +
Preference number: 4 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTIDTGK*PTLWTL
Trigger: CAGGGTCCACAGCGTGGGGCATTTCCCAGTGTCTAT...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGATAGACACTGGGAAATaGCCCACGCTGTGGACCCTG +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKIDTGK*PTLWTL
Trigger: CAGGGTCCACAGCGTGGGGCATTTCCCAGTGTCTAT...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAACGAAGGTCTTGGGAGTaGACTGCGACCCATTATCCC +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQRRSWE*TATHYP
Trigger: GGGATAATGGGTCGCAGTGCACTCCCAAGACCTTCG...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGCGAAGGTCTTGGGAGTaGACTGCGACCCATTATCCC +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKRRSWE*TATHYP
Trigger: GGGATAATGGGTCGCAGTGCACTCCCAAGACCTTCG...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTCGAAGGTCTTGGGAGTaGACTGCGACCCATTATCCC +
Preference number: 4 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTRRSWE*TATHYP
Trigger: GGGATAATGGGTCGCAGTGCACTCCCAAGACCTTCG...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGAAAGGGGAACATCTTaGAAGACGAGGCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMERGTS*KTRLRW
Trigger: CCACCTCAGCCTCGTCTTCCAAGATGTTCCCCTTTC...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTGAAAATACTGGGAACTaGGGCTCCTCCTACACTCCC +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVENTGN*GSSYTP
Trigger: GGGAGTGTAGGAGGAGCCCCAGTTCCCAGTATTTTC...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTCTGTCGGATAGACACTaGGAAATGCCCCACGCTGTG +
Preference number: 4 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTLSDRH*EMPHAV
Trigger: CACAGCGTGGGGCATTTCCCAGTGTCTATCCGACAG...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAACTGTCGGATAGACACTaGGAAATGCCCCACGCTGTG +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQLSDRH*EMPHAV
Trigger: CACAGCGTGGGGCATTTCCCAGTGTCTATCCGACAG...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCTGCCTTGAACGGTTaGACTCACATAGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTAALNG*THIGCG
Trigger: GCCACAGCCTATGTGAGTCCAACCGTTCAAGGCAGC...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAGCTGCCTTGAACGGTTaGACTCACATAGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQAALNG*THIGCG
Trigger: GCCACAGCCTATGTGAGTCCAACCGTTCAAGGCAGC...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAATGCCAACGAAGGTCTTaGGAGTGCACTGCGACCCAT +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQCQRRS*ECTATH
Trigger: ATGGGTCGCAGTGCACTCCCAAGACCTTCGTTGGCA...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGCTCACTGTCGATAGATaGCTGGGGACTGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNELTVDR*LGTEWG
Trigger: TCCCCACTCAGTCCCCAGTCATCTATCGACAGTGAG...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTAGACGAGCCATGATCTaGACATCAGTGAGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVRRAMI*TSVRSC
Trigger: ACAGGACCTCACTGATGTTCAGATCATGGCTCGTCT...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGAGACGAGCCATGATCTaGACATCAGTGAGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMRRAMI*TSVRSC
Trigger: ACAGGACCTCACTGATGTTCAGATCATGGCTCGTCT...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGCAGGGAACGTCTCGCTaGTTCCATCTCAGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNEQGTSR*FHLRSW
Trigger: CCAACTCCTGAGATGGAAGCAGCGAGACGTTCCCTG...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267219.12
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGATAGACACTGGGAAATaGCCCACGCTGTGGACCCTG +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNEIDTGK*PTLWTL
Trigger: CAGGGTCCACAGCGTGGGGCATTTCCCAGTGTCTAT...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGCATTATCCCAGAAGCTaGAGCTTTGTTCGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMHYPRS*SFVRCG
Trigger: CCCACACCGAACAAAGCTGCAGCTTCTGGGATAATG...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTCATTATCCCAGAAGCTaGAGCTTTGTTCGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVHYPRS*SFVRCG
Trigger: CCCACACCGAACAAAGCTGCAGCTTCTGGGATAATG...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGGCCGAAGAAGCCTGCTaGCGGCTTGAAGTAGACGAA +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNEAEEAC*RLEVDE
Trigger: TTCGTCTACTTCAAGCCGGCAGCAGGCTTCTTCGGC...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGGAAAGGGGAACATCTTaGAAGACGAGGCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKERGTS*KTRLRW
Trigger: CCACCTCAGCCTCGTCTTCCAAGATGTTCCCCTTTC...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAGAAAGGGGAACATCTTaGAAGACGAGGCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQERGTS*KTRLRW
Trigger: CCACCTCAGCCTCGTCTTCCAAGATGTTCCCCTTTC...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGGAAAATACTGGGAACTaGGGCTCCTCCTACACTCCC +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKENTGN*GSSYTP
Trigger: GGGAGTGTAGGAGGAGCCCCAGTTCCCAGTATTTTC...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGAAAATACTGGGAACTaGGGCTCCTCCTACACTCCC +
Preference number: 4 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTENTGN*GSSYTP
Trigger: GGGAGTGTAGGAGGAGCCCCAGTTCCCAGTATTTTC...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGCTGTCGGATAGACACTaGGAAATGCCCCACGCTGTG +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNELSDRH*EMPHAV
Trigger: CACAGCGTGGGGCATTTCCCAGTGTCTATCCGACAG...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGTGCCAACGAAGGTCTTaGGAGTGCACTGCGACCCAT +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNECQRRS*ECTATH
Trigger: ATGGGTCGCAGTGCACTCCCAAGACCTTCGTTGGCA...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTCGCCATCGGCTAGAGTaGTTAAGCAGCTTTTCCCAA +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVRHRLE*LSSFSQ
Trigger: TTGGGAAAAGCTGCTTAACCACTCTAGCCGATGGCG...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000314070.9
CDS-3UTR TCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAAGACGAGCCATGATCTaGACATCAGTGAGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQRRAMI*TSVRSC
Trigger: ACAGGACCTCACTGATGTTCAGATCATGGCTCGTCT...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTAGACGAGCCATGATCTaGACATCAGTGAGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTRRAMI*TSVRSC
Trigger: ACAGGACCTCACTGATGTTCAGATCATGGCTCGTCT...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTGCTGGAGAAAGTCTGTaGATGGGGAATTCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVAGESL*MGNSSL
Trigger: CAAAGAGGAATTCCCCATTCACAGACTTTCTCCAGC...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTCTTGAGTCAAAACTCTaGCTATTTCGCACGGTGACC +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVLESKL*LFRTVT
Trigger: GGTCACCGTGCGAAATAGTCAGAGTTTTGACTCAAG...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTAAGGCATGTTACTGCTaGCTTGAACGGTTGGACTCA +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVKACYC*LERLDS
Trigger: TGAGTCCAACCGTTCAAGGCAGCAGTAACATGCCTT...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGAAGGCATGTTACTGCTaGCTTGAACGGTTGGACTCA +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMKACYC*LERLDS
Trigger: TGAGTCCAACCGTTCAAGGCAGCAGTAACATGCCTT...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGCATTATCCCAGAAGCTaGAGCTTTGTTCGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKHYPRS*SFVRCG
Trigger: CCCACACCGAACAAAGCTGCAGCTTCTGGGATAATG...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTCATTATCCCAGAAGCTaGAGCTTTGTTCGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTHYPRS*SFVRCG
Trigger: CCCACACCGAACAAAGCTGCAGCTTCTGGGATAATG...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTCAGGTTGTGCAATTTTaGTTCGAGGCAGGTTACTCC +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVQVVQF*FEAGYS
Trigger: GGAGTAACCTGCCTCGAAGCAAAATTGCACAACCTG...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGCAGGTTGTGCAATTTTaGTTCGAGGCAGGTTACTCC +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMQVVQF*FEAGYS
Trigger: GGAGTAACCTGCCTCGAAGCAAAATTGCACAACCTG...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTCTGAACCTCCCCCTCTaGCTGTATATTCCAAGTGGA +
Preference number: 4 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTLNLPL*LYIPSG
Trigger: TCCACTTGGAATATACAGGCAGAGGGGGAGGTTCAG...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000351546.7
CDS-3UTR CCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTACGAGGCTGAGGTGGTaGCAAATGATCAAATTCCTC +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVTRLRW*QMIKFL
Trigger: GAGGAATTTGATCATTTGCCACCACCTCAGCCTCGT...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGGAAAGGGGAACATCTTaGAAGACGAGGCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNEERGTS*KTRLRW
Trigger: CCACCTCAGCCTCGTCTTCCAAGATGTTCCCCTTTC...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGTGGGGATTCCTGTGTTaGAATACAGCTGTAAGCCGT +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMWGFLC*NTAVSR
Trigger: ACGGCTTACAGCTGTATTCCAACACAGGAATCCCCA...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTCAGCTTTGTTCGGTGTaGGGATTCCTGTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVQLCSV*GFLCWN
Trigger: ATTCCAACACAGGAATCCCCACACCGAACAAAGCTG...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGAGACGAGCCATGATCTaGACATCAGTGAGGTCCTGT +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNERRAMI*TSVRSC
Trigger: ACAGGACCTCACTGATGTTCAGATCATGGCTCGTCT...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGGCTGGAGAAAGTCTGTaGATGGGGAATTCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKAGESL*MGNSSL
Trigger: CAAAGAGGAATTCCCCATTCACAGACTTTCTCCAGC...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAGCTGGAGAAAGTCTGTaGATGGGGAATTCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQAGESL*MGNSSL
Trigger: CAAAGAGGAATTCCCCATTCACAGACTTTCTCCAGC...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCTGGAGAAAGTCTGTaGATGGGGAATTCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTAGESL*MGNSSL
Trigger: CAAAGAGGAATTCCCCATTCACAGACTTTCTCCAGC...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGCTTGAGTCAAAACTCTaGCTATTTCGCACGGTGACC +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKLESKL*LFRTVT
Trigger: GGTCACCGTGCGAAATAGTCAGAGTTTTGACTCAAG...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTCTTGAGTCAAAACTCTaGCTATTTCGCACGGTGACC +
Preference number: 4 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTLESKL*LFRTVT
Trigger: GGTCACCGTGCGAAATAGTCAGAGTTTTGACTCAAG...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAACTTGAGTCAAAACTCTaGCTATTTCGCACGGTGACC +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQLESKL*LFRTVT
Trigger: GGTCACCGTGCGAAATAGTCAGAGTTTTGACTCAAG...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGAGAGGCTTTGGAGGCTaGAGAAAACTTCTAACAGGT +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMRGFGG*RKLLTG
Trigger: ACCTGTTAGAAGTTTTCTTCAGCCTCCAAAGCCTCT...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTAGAGGCTTTGGAGGCTaGAGAAAACTTCTAACAGGT +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVRGFGG*RKLLTG
Trigger: ACCTGTTAGAAGTTTTCTTCAGCCTCCAAAGCCTCT...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGCTGCAACCATGGGTTTaGGAATGTTGCAGTATCTCA +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMLQPWV*ECCSIS
Trigger: TGAGATACTGCAACATTCTCAAACCCATGGTTGCAG...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTCTGCAACCATGGGTTTaGGAATGTTGCAGTATCTCA +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVLQPWV*ECCSIS
Trigger: TGAGATACTGCAACATTCTCAAACCCATGGTTGCAG...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTCCATTTCCAGCTCCATaGAAGCTTGAGTCAAAACTC +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVPFPAP*KLESKL
Trigger: GAGTTTTGACTCAAGCTTGCATGGAGCTGGAAATGG...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGCCATTTCCAGCTCCATaGAAGCTTGAGTCAAAACTC +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMPFPAP*KLESKL
Trigger: GAGTTTTGACTCAAGCTTGCATGGAGCTGGAAATGG...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTAAGGCATGTTACTGCTaGCTTGAACGGTTGGACTCA +
Preference number: 4 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTKACYC*LERLDS
Trigger: TGAGTCCAACCGTTCAAGGCAGCAGTAACATGCCTT...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAAAGGCATGTTACTGCTaGCTTGAACGGTTGGACTCA +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQKACYC*LERLDS
Trigger: TGAGTCCAACCGTTCAAGGCAGCAGTAACATGCCTT...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGAAGGCATGTTACTGCTaGCTTGAACGGTTGGACTCA +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKKACYC*LERLDS
Trigger: TGAGTCCAACCGTTCAAGGCAGCAGTAACATGCCTT...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTATAAAGGCATGTTACTaGTGCCTTGAACGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVIKACY*CLERLD
Trigger: GTCCAACCGTTCAAGGCAGCAGTAACATGCCTTTAT...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGATAAAGGCATGTTACTaGTGCCTTGAACGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMIKACY*CLERLD
Trigger: GTCCAACCGTTCAAGGCAGCAGTAACATGCCTTTAT...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGCATTATCCCAGAAGCTaGAGCTTTGTTCGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNEHYPRS*SFVRCG
Trigger: CCCACACCGAACAAAGCTGCAGCTTCTGGGATAATG...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTGTTACTCCCATTTATTaGCAACGAAGGTCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVVTPIY*QRRSWE
Trigger: CTCCCAAGACCTTCGTTGGCAATAAATGGGAGTAAC...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGCAGGTTGTGCAATTTTaGTTCGAGGCAGGTTACTCC +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKQVVQF*FEAGYS
Trigger: GGAGTAACCTGCCTCGAAGCAAAATTGCACAACCTG...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTCAGGTTGTGCAATTTTaGTTCGAGGCAGGTTACTCC +
Preference number: 4 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTQVVQF*FEAGYS
Trigger: GGAGTAACCTGCCTCGAAGCAAAATTGCACAACCTG...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAACAGGTTGTGCAATTTTaGTTCGAGGCAGGTTACTCC +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQQVVQF*FEAGYS
Trigger: GGAGTAACCTGCCTCGAAGCAAAATTGCACAACCTG...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTACGAGGCTGAGGTGGTaGCAAATGATCAAATTCCTC +
Preference number: 4 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTTRLRW*QMIKFL
Trigger: GAGGAATTTGATCATTTGCCACCACCTCAGCCTCGT...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTAAGACGAGGCTGAGGTaGTGGCAAATGATCAAATTC +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVKTRLR*WQMIKF
Trigger: GAATTTGATCATTTGCCACCACCTCAGCCTCGTCTT...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGAAGACGAGGCTGAGGTaGTGGCAAATGATCAAATTC +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMKTRLR*WQMIKF
Trigger: GAATTTGATCATTTGCCACCACCTCAGCCTCGTCTT...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGTGGGGAATTCCTCTTTaGAAAGGGGAACATCTTGGA +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMWGIPL*KGEHLG
Trigger: TCCAAGATGTTCCCCTTTCCAAAGAGGAATTCCCCA...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTTGGGGAATTCCTCTTTaGAAAGGGGAACATCTTGGA +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVWGIPL*KGEHLG
Trigger: TCCAAGATGTTCCCCTTTCCAAAGAGGAATTCCCCA...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGTACACTCCCGAATGCTaGAGAAAGTCTGTGAATGGG +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKYTPEC*RKSVNG
Trigger: CCCATTCACAGACTTTCTCCAGCATTCGGGAGTGTA...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTTACACTCCCGAATGCTaGAGAAAGTCTGTGAATGGG +
Preference number: 4 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTYTPEC*RKSVNG
Trigger: CCCATTCACAGACTTTCTCCAGCATTCGGGAGTGTA...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAATACACTCCCGAATGCTaGAGAAAGTCTGTGAATGGG +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQYTPEC*RKSVNG
Trigger: CCCATTCACAGACTTTCTCCAGCATTCGGGAGTGTA...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGTGGGGATTCCTGTGTTaGAATACAGCTGTAAGCCGT +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKWGFLC*NTAVSR
Trigger: ACGGCTTACAGCTGTATTCCAACACAGGAATCCCCA...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAATGGGGATTCCTGTGTTaGAATACAGCTGTAAGCCGT +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQWGFLC*NTAVSR
Trigger: ACGGCTTACAGCTGTATTCCAACACAGGAATCCCCA...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAACAGCTTTGTTCGGTGTaGGGATTCCTGTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQQLCSV*GFLCWN
Trigger: ATTCCAACACAGGAATCCCCACACCGAACAAAGCTG...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTCAGCTTTGTTCGGTGTaGGGATTCCTGTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTQLCSV*GFLCWN
Trigger: ATTCCAACACAGGAATCCCCACACCGAACAAAGCTG...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTAAGCATAATCTTGCCTaGGACTTTCTTCTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVKHNLA*DFLLAD
Trigger: GTCTGCAAGAAGAAAGTCTCAGGCAAGATTATGCTT...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267219.12
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAAGTTTGGGCTTGAGGTaGATAATACTGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQSLGLR*IILLLL
Trigger: CAGCAGCAACAGTATTATTCACCTCAAGCCCAAACT...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTAGTTTGGGCTTGAGGTaGATAATACTGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTSLGLR*IILLLL
Trigger: CAGCAGCAACAGTATTATTCACCTCAAGCCCAAACT...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGCTTGAGTCAAAACTCTaGCTATTTCGCACGGTGACC +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNELESKL*LFRTVT
Trigger: GGTCACCGTGCGAAATAGTCAGAGTTTTGACTCAAG...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGTTGAAGCTGTCCCGGTaGTGGAATACAAGATTGTAT +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMLKLSR*WNTRLY
Trigger: ATACAATCTTGTATTCCATCACCGGGACAGCTTCAA...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTTTGAAGCTGTCCCGGTaGTGGAATACAAGATTGTAT +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVLKLSR*WNTRLY
Trigger: ATACAATCTTGTATTCCATCACCGGGACAGCTTCAA...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGAGAGGCTTTGGAGGCTaGAGAAAACTTCTAACAGGT +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKRGFGG*RKLLTG
Trigger: ACCTGTTAGAAGTTTTCTTCAGCCTCCAAAGCCTCT...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAACTGCAACCATGGGTTTaGGAATGTTGCAGTATCTCA +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQLQPWV*ECCSIS
Trigger: TGAGATACTGCAACATTCTCAAACCCATGGTTGCAG...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGCTGCAACCATGGGTTTaGGAATGTTGCAGTATCTCA +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKLQPWV*ECCSIS
Trigger: TGAGATACTGCAACATTCTCAAACCCATGGTTGCAG...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAACATTGCTATAAGGGCTaGGTCTTGCAACAGGACTAT +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQHCYKG*VLQQDY
Trigger: ATAGTCCTGTTGCAAGACTCAGCCCTTATAGCAATG...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314070.9
CDS-3UTR GCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGTCCTACACTCCCGAATaGTGGAGAAAGTCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKSYTPE*WRKSVN
Trigger: ATTCACAGACTTTCTCCAGCATTCGGGAGTGTAGGA...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAACCATTTCCAGCTCCATaGAAGCTTGAGTCAAAACTC +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQPFPAP*KLESKL
Trigger: GAGTTTTGACTCAAGCTTGCATGGAGCTGGAAATGG...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGAAGGCATGTTACTGCTaGCTTGAACGGTTGGACTCA +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNEKACYC*LERLDS
Trigger: TGAGTCCAACCGTTCAAGGCAGCAGTAACATGCCTT...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAATAAAGGCATGTTACTaGTGCCTTGAACGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQIKACY*CLERLD
Trigger: GTCCAACCGTTCAAGGCAGCAGTAACATGCCTTTAT...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGATAAAGGCATGTTACTaGTGCCTTGAACGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKIKACY*CLERLD
Trigger: GTCCAACCGTTCAAGGCAGCAGTAACATGCCTTTAT...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGGTTACTCCCATTTATTaGCAACGAAGGTCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKVTPIY*QRRSWE
Trigger: CTCCCAAGACCTTCGTTGGCAATAAATGGGAGTAAC...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGCAGGTTGTGCAATTTTaGTTCGAGGCAGGTTACTCC +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNEQVVQF*FEAGYS
Trigger: GGAGTAACCTGCCTCGAAGCAAAATTGCACAACCTG...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTACTTCTAACAGGTTGTaGAATTTTGCTTCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVTSNRL*NFASRQ
Trigger: CTGCCTCGAAGCAAAATTGCACAACCTGTTAGAAGT...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGACTTCTAACAGGTTGTaGAATTTTGCTTCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMTSNRL*NFASRQ
Trigger: CTGCCTCGAAGCAAAATTGCACAACCTGTTAGAAGT...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGACATGTCTACACCACTaGAAAGGAGTCAGGGATTTC +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKTCLHH*KGVRDF
Trigger: GAAATCCCTGACTCCTTTGCAGTGGTGTAGACATGT...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGACGAGGCTGAGGTGGTaGCAAATGATCAAATTCCTC +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNETRLRW*QMIKFL
Trigger: GAGGAATTTGATCATTTGCCACCACCTCAGCCTCGT...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGAAGACGAGGCTGAGGTaGTGGCAAATGATCAAATTC +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKKTRLR*WQMIKF
Trigger: GAATTTGATCATTTGCCACCACCTCAGCCTCGTCTT...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAAAGACGAGGCTGAGGTaGTGGCAAATGATCAAATTC +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQKTRLR*WQMIKF
Trigger: GAATTTGATCATTTGCCACCACCTCAGCCTCGTCTT...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGTGGGGAATTCCTCTTTaGAAAGGGGAACATCTTGGA +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKWGIPL*KGEHLG
Trigger: TCCAAGATGTTCCCCTTTCCAAAGAGGAATTCCCCA...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGTACACTCCCGAATGCTaGAGAAAGTCTGTGAATGGG +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNEYTPEC*RKSVNG
Trigger: CCCATTCACAGACTTTCTCCAGCATTCGGGAGTGTA...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGTCCATTGGTCCTATTTaGTTGCTGATCTGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMSIGPI*LLIWSL
Trigger: CAAACTCCAGATCAGCAACCAAATAGGACCAATGGA...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTTCCATTGGTCCTATTTaGTTGCTGATCTGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVSIGPI*LLIWSL
Trigger: CAAACTCCAGATCAGCAACCAAATAGGACCAATGGA...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGTGGGGATTCCTGTGTTaGAATACAGCTGTAAGCCGT +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNEWGFLC*NTAVSR
Trigger: ACGGCTTACAGCTGTATTCCAACACAGGAATCCCCA...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGCAGCTTTGTTCGGTGTaGGGATTCCTGTGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNEQLCSV*GFLCWN
Trigger: ATTCCAACACAGGAATCCCCACACCGAACAAAGCTG...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGATCTTGCCTGAGACCTaGAGAGAAATGCCTGAACCT +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNEILPET*REMPEP
Trigger: AGGTTCAGGCATTTCTCTCCAGGTCTCAGGCAAGAT...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000351546.7
CDS-3UTR TCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAAAGCATAATCTTGCCTaGGACTTTCTTCTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQKHNLA*DFLLAD
Trigger: GTCTGCAAGAAGAAAGTCTCAGGCAAGATTATGCTT...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267219.12
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGAAGCATAATCTTGCCTaGGACTTTCTTCTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKKHNLA*DFLLAD
Trigger: GTCTGCAAGAAGAAAGTCTCAGGCAAGATTATGCTT...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267219.12
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGAGTTTGGGCTTGAGGTaGATAATACTGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNESLGLR*IILLLL
Trigger: CAGCAGCAACAGTATTATTCACCTCAAGCCCAAACT...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTTTGAAGCTGTCCCGGTaGTGGAATACAAGATTGTAT +
Preference number: 4 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTLKLSR*WNTRLY
Trigger: ATACAATCTTGTATTCCATCACCGGGACAGCTTCAA...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGTTGAAGCTGTCCCGGTaGTGGAATACAAGATTGTAT +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKLKLSR*WNTRLY
Trigger: ATACAATCTTGTATTCCATCACCGGGACAGCTTCAA...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGAGAGGCTTTGGAGGCTaGAGAAAACTTCTAACAGGT +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNERGFGG*RKLLTG
Trigger: ACCTGTTAGAAGTTTTCTTCAGCCTCCAAAGCCTCT...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTCTATGTAGGTCAACTTaGCTCCAGAATACACTACAA +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVLCRST*LQNTLQ
Trigger: TTGTAGTGTATTCTGGAGTCAAGTTGACCTACATAG...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000314070.9
ENST00000351546.7
CDS-3UTR GCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGTCCTACACTCCCGAATaGTGGAGAAAGTCTGTGAAT +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNESYTPE*WRKSVN
Trigger: ATTCACAGACTTTCTCCAGCATTCGGGAGTGTAGGA...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGCCATTTCCAGCTCCATaGAAGCTTGAGTCAAAACTC +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNEPFPAP*KLESKL
Trigger: GAGTTTTGACTCAAGCTTGCATGGAGCTGGAAATGG...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGATAAAGGCATGTTACTaGTGCCTTGAACGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNEIKACY*CLERLD
Trigger: GTCCAACCGTTCAAGGCAGCAGTAACATGCCTTTAT...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGGTTACTCCCATTTATTaGCAACGAAGGTCTTGGGAG +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNEVTPIY*QRRSWE
Trigger: CTCCCAAGACCTTCGTTGGCAATAAATGGGAGTAAC...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAACTTCTAACAGGTTGTaGAATTTTGCTTCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQTSNRL*NFASRQ
Trigger: CTGCCTCGAAGCAAAATTGCACAACCTGTTAGAAGT...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGACTTCTAACAGGTTGTaGAATTTTGCTTCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKTSNRL*NFASRQ
Trigger: CTGCCTCGAAGCAAAATTGCACAACCTGTTAGAAGT...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAATTGCAGGTATTAAGTaGAATGAGCTCATGATGCCG +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQIAGIK*NELMMP
Trigger: CGGCATCATGAGCTCATTGCACTTAATACCTGCAAT...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGATTGCAGGTATTAAGTaGAATGAGCTCATGATGCCG +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKIAGIK*NELMMP
Trigger: CGGCATCATGAGCTCATTGCACTTAATACCTGCAAT...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGTGGGGAATTCCTCTTTaGAAAGGGGAACATCTTGGA +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNEWGIPL*KGEHLG
Trigger: TCCAAGATGTTCCCCTTTCCAAAGAGGAATTCCCCA...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAATCCATTGGTCCTATTTaGTTGCTGATCTGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQSIGPI*LLIWSL
Trigger: CAAACTCCAGATCAGCAACCAAATAGGACCAATGGA...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAGGAGCTTATCTCCATTaGTCCTATTTGGTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQGAYLH*SYLVAD
Trigger: ATCAGCAACCAAATAGGACCAATGGAGATAAGCTCC...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGGAGCTTATCTCCATTaGTCCTATTTGGTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTGAYLH*SYLVAD
Trigger: ATCAGCAACCAAATAGGACCAATGGAGATAAGCTCC...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTTTAGTCTCTGGTGACTaGTCCATTGAGAAACAATGC +
Preference number: 4 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTLVSGD*SIEKQC
Trigger: GCATTGTTTCTCAATGGACCAGTCACCAGAGACTAA...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
3UTR CAA 72 bp CCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTaGAGAATGTTGCAGTATCTCAGGCAAATATTTAAG +
Preference number: 4 (lower is better)
Translates to: PRSKCHNTATMG*RMLQYLRQIFK
Trigger: CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATTGTGACACTTAGATCTAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGAAGCATAATCTTGCCTaGGACTTTCTTCTTGCAGAC +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNEKHNLA*DFLLAD
Trigger: GTCTGCAAGAAGAAAGTCTCAGGCAAGATTATGCTT...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267219.12
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTCTGCTGGTAATTATTTaGAGGAAAATACTGGGAACT +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVLLVII*RKILGT
Trigger: AGTTCCCAGTATTTTCCTTCAAATAATTACCAGCAG...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGTTGAAGCTGTCCCGGTaGTGGAATACAAGATTGTAT +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNELKLSR*WNTRLY
Trigger: ATACAATCTTGTATTCCATCACCGGGACAGCTTCAA...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTAGTGCAATGAGCTCATaGTGCCGTTATAAATATGAA +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVSAMSS*CRYKYE
Trigger: TTCATATTTATAACGGCATCATGAGCTCATTGCACT...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGTATTTTATACCAGTCTaGTCACTTGCCAGGCAAATT +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMYFIPV*SLARQI
Trigger: AATTTGCCTGGCAAGTGATCAGACTGGTATAAAATA...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000314070.9
ENST00000351546.7
CDS-3UTR TCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAACCAATAGTTCTTTGTaGCTGCTATCTTGCCTAACA +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQTNSSL*LLSCLT
Trigger: TGTTAGGCAAGATAGCAGTCACAAAGAACTATTGGT...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314070.9
ENST00000351546.7
CDS-3UTR TCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGCTATGTAGGTCAACTTaGCTCCAGAATACACTACAA +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKLCRST*LQNTLQ
Trigger: TTGTAGTGTATTCTGGAGTCAAGTTGACCTACATAG...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000314070.9
ENST00000351546.7
CDS-3UTR TCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGATTTCTCTGATGAGGTaGACGTCTTTGAAGAGCCAA +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNEISLMR*TSLKSQ
Trigger: TTGGCTCTTCAAAGACGTTCACCTCATCAGAGAAAT...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGACTTCTAACAGGTTGTaGAATTTTGCTTCGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNETSNRL*NFASRQ
Trigger: CTGCCTCGAAGCAAAATTGCACAACCTGTTAGAAGT...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGATTGCAGGTATTAAGTaGAATGAGCTCATGATGCCG +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNEIAGIK*NELMMP
Trigger: CGGCATCATGAGCTCATTGCACTTAATACCTGCAAT...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGATAAGGGCTGAGTCTTaGAACAGGACTATAAGGAAA +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKIRAES*NRTIRK
Trigger: TTTCCTTATAGTCCTGTTGCAAGACTCAGCCCTTAT...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000314070.9
CDS-3UTR CCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGTCCATTGGTCCTATTTaGTTGCTGATCTGGAGTTTG +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNESIGPI*LLIWSL
Trigger: CAAACTCCAGATCAGCAACCAAATAGGACCAATGGA...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGGGAGCTTATCTCCATTaGTCCTATTTGGTTGCTGAT +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNEGAYLH*SYLVAD
Trigger: ATCAGCAACCAAATAGGACCAATGGAGATAAGCTCC...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAACTGCTGGTAATTATTTaGAGGAAAATACTGGGAACT +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQLLVII*RKILGT
Trigger: AGTTCCCAGTATTTTCCTTCAAATAATTACCAGCAG...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGCTGCTGGTAATTATTTaGAGGAAAATACTGGGAACT +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKLLVII*RKILGT
Trigger: AGTTCCCAGTATTTTCCTTCAAATAATTACCAGCAG...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGAGTGCAATGAGCTCATaGTGCCGTTATAAATATGAA +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKSAMSS*CRYKYE
Trigger: TTCATATTTATAACGGCATCATGAGCTCATTGCACT...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAAGTGCAATGAGCTCATaGTGCCGTTATAAATATGAA +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQSAMSS*CRYKYE
Trigger: TTCATATTTATAACGGCATCATGAGCTCATTGCACT...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGACCAATAGTTCTTTGTaGCTGCTATCTTGCCTAACA +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNETNSSL*LLSCLT
Trigger: TGTTAGGCAAGATAGCAGTCACAAAGAACTATTGGT...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000314070.9
ENST00000351546.7
CDS-3UTR GCA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGTTATCTCCTTGCAATaGTTCAAATTATGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMVISLQ*FKLCCA
Trigger: AGCACAACATAATTTGAAGCATTGCAAGGAGATAAC...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTGTTATCTCCTTGCAATaGTTCAAATTATGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVVISLQ*FKLCCA
Trigger: AGCACAACATAATTTGAAGCATTGCAAGGAGATAAC...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTAACTCAATGACACACTaGAACTATGTCTTGATACAG +
Preference number: 4 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTNSMTH*NYVLIQ
Trigger: CTGTATCAAGACATAGTTCCAGTGTGTCATTGAGTT...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CCA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGAACTCAATGACACACTaGAACTATGTCTTGATACAG +
Preference number: 4 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKNSMTH*NYVLIQ
Trigger: CTGTATCAAGACATAGTTCCAGTGTGTCATTGAGTT...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGAGTGCAATGAGCTCATaGTGCCGTTATAAATATGAA +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNESAMSS*CRYKYE
Trigger: TTCATATTTATAACGGCATCATGAGCTCATTGCACT...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR TCA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGTATTTTATACCAGTCTaGTCACTTGCCAGGCAAATT +
Preference number: 4 (lower is better)
Translates to: LKINCGTVANIAGIKCNEYFIPV*SLARQI
Trigger: AATTTGCCTGGCAAGTGATCAGACTGGTATAAAATA...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000314070.9
ENST00000351546.7
CDS-3UTR GCA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGTTATCTCCTTGCAATaGTTCAAATTATGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTVISLQ*FKLCCA
Trigger: AGCACAACATAATTTGAAGCATTGCAAGGAGATAAC...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR GCA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAGTTATCTCCTTGCAATaGTTCAAATTATGTTGTGCT +
Preference number: 4 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQVISLQ*FKLCCA
Trigger: AGCACAACATAATTTGAAGCATTGCAAGGAGATAAC...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS GCA 90 bp CCGGAGCCCGCTCCAGAGCTGACCCCTGCCGAGGCGCATTTCACCTaGTCCGCCATCATCGTGGGCCCCGAGGGCGCCGCGGCCGCCGGG +
Preference number: 5 (lower is better)
Translates to: PEPAPELTPAEAHFT*SAIIVGPEGAAAAG
Trigger: CCCGGCGGCCGCGGCGCCCTCGGGGCCCACGATGATGGCGGAGCAGGTGAAATGCGCCTCGGCAGGGGTCAGCTCTGGAGCGGGCTCCGG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418532.6
CDS TCA 90 bp GCTCCGGCCCGCCACCGCCCGCGCCGAAGAAGCCTGCTGCCGGCTTaGAGTAGACGAAGGGCGCCTCGGGTGGCTGCGCCAGGCTGCAAA +
Preference number: 5 (lower is better)
Translates to: APARHRPRRRSLLPA*SRRRAPRVAAPGCK
Trigger: TTTGCAGCCTGGCGCAGCCACCCGAGGCGCCCTTCGTCTACTTCAAGCCGGCAGCAGGCTTCTTCGGCGCGGGCGGTGGCGGGCCGGAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS GCA 90 bp CTCCGCGTTCACCACCGGCCCGGAGCCCGCTCCAGAGCTGACCCCTaGCGAGGCGCATTTCACCTGCTCCGCCATCATCGTGGGCCCCGA +
Preference number: 5 (lower is better)
Translates to: LRVHHRPGARSRADP*RGAFHLLRHHRGPR
Trigger: TCGGGGCCCACGATGATGGCGGAGCAGGTGAAATGCGCCTCGGCAGGGGTCAGCTCTGGAGCGGGCTCCGGGCCGGTGGTGAACGCGGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS TCA 90 bp CCTCCAGCTCCGCGTTCACCACCGGCCCGGAGCCCGCTCCAGAGCTaGCCCCTGCCGAGGCGCATTTCACCTGCTCCGCCATCATCGTGG +
Preference number: 5 (lower is better)
Translates to: PPAPRSPPARSPLQS*PLPRRISPAPPSSW
Trigger: CCACGATGATGGCGGAGCAGGTGAAATGCGCCTCGGCAGGGGTCAGCTCTGGAGCGGGCTCCGGGCCGGTGGTGAACGCGGAGCTGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS CCA 90 bp GAAGAAGCCTGCTGCCGGCTTGAAGTAGACGAAGGGCGCCTCGGGTaGCTGCGCCAGGCTGCAAAGCAGGGAGGGCGCGGGGCTAGGCAG +
Preference number: 5 (lower is better)
Translates to: EEACCRLEVDEGRLG*LRQAAKQGGRGARQ
Trigger: CTGCCTAGCCCCGCGCCCTCCCTGCTTTGCAGCCTGGCGCAGCCACCCGAGGCGCCCTTCGTCTACTTCAAGCCGGCAGCAGGCTTCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS CCA 90 bp TGGACTCACATAGGCTGTGGCTTTAAGAGGCTGTCGGATAGACACTaGGAAATGCCCCACGCTGTGGACCCTGTGTTGAAGCTGTCCCGG +
Preference number: 5 (lower is better)
Translates to: WTHIGCGFKRLSDRH*EMPHAVDPVLKLSR
Trigger: CCGGGACAGCTTCAACACAGGGTCCACAGCGTGGGGCATTTCCCAGTGTCTATCCGACAGCCTCTTAAAGCCACAGCCTATGTGAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000441784.5
ENST00000466548.5
ENST00000488699.5
CDS GCA 90 bp ACGAACCTCTCTATAAAGAGAGATCCATCACTGCGCGGCTTCCGATaGCACCCGAGGAGGAAGAGCACGCAAATCCTGTCCAGCGTTCGT +
Preference number: 5 (lower is better)
Translates to: TNLSIKRDPSLRGFR*HPRRKSTQILSSVR
Trigger: ACGAACGCTGGACAGGATTTGCGTGCTCTTCCTCCTCGGGTGGCATCGGAAGCCGCGCAGTGATGGATCTCTCTTTATAGAGAGGTTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377236.2
CDS GCA 90 bp CAACGAAGGTCTTGGGAGTGCACTGCGACCCATTATCCCAGAAGCTaGAGCTTTGTTCGGTGTGGGGATTCCTGTGTTGGAATACAGCTG +
Preference number: 5 (lower is better)
Translates to: QRRSWECTATHYPRS*SFVRCGDSCVGIQL
Trigger: CAGCTGTATTCCAACACAGGAATCCCCACACCGAACAAAGCTGCAGCTTCTGGGATAATGGGTCGCAGTGCACTCCCAAGACCTTCGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
ENST00000488699.5
CDS GCA 90 bp TATAACCTCTCTATAAAGAGAGATCCATCACTGCGCGGCTTCCGATaGCACCCGAGGAGGAAGAGCACGCAAATCCTGTCCAGCGTTCGT +
Preference number: 5 (lower is better)
Translates to: YNLSIKRDPSLRGFR*HPRRKSTQILSSVR
Trigger: ACGAACGCTGGACAGGATTTGCGTGCTCTTCCTCCTCGGGTGGCATCGGAAGCCGCGCAGTGATGGATCTCTCTTTATAGAGAGGTTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488699.5
CDS CCA 90 bp CTGGGGCTCCTCCTACACTCCCGAATGCTGGAGAAAGTCTGTGAATaGGGAATTCCTCTTTGGAAAGGGGAACATCTTGGAAGACGAGGC +
Preference number: 5 (lower is better)
Translates to: LGLLLHSRMLEKVCE*GIPLWKGEHLGRRG
Trigger: GCCTCGTCTTCCAAGATGTTCCCCTTTCCAAAGAGGAATTCCCCATTCACAGACTTTCTCCAGCATTCGGGAGTGTAGGAGGAGCCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000441784.5
ENST00000442759.5
ENST00000446759.5
ENST00000465831.1
ENST00000466548.5
ENST00000474663.5
ENST00000488699.5
ENST00000496045.5
CDS GCA 90 bp TCGAGGCAGGTTACTCCCATTTATTGCCAACGAAGGTCTTGGGAGTaGACTGCGACCCATTATCCCAGAAGCTGCAGCTTTGTTCGGTGT +
Preference number: 5 (lower is better)
Translates to: SRQVTPIYCQRRSWE*TATHYPRSCSFVRC
Trigger: ACACCGAACAAAGCTGCAGCTTCTGGGATAATGGGTCGCAGTGCACTCCCAAGACCTTCGTTGGCAATAAATGGGAGTAACCTGCCTCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
ENST00000488699.5
CDS CCA 90 bp GTGCACTGCGACCCATTATCCCAGAAGCTGCAGCTTTGTTCGGTGTaGGGATTCCTGTGTTGGAATACAGCTGTAAGCCGTTTGATAAAG +
Preference number: 5 (lower is better)
Translates to: VHCDPLSQKLQLCSV*GFLCWNTAVSRLIK
Trigger: CTTTATCAAACGGCTTACAGCTGTATTCCAACACAGGAATCCCCACACCGAACAAAGCTGCAGCTTCTGGGATAATGGGTCGCAGTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
ENST00000488699.5
CDS CCA 90 bp TTTGCTTCGAGGCAGGTTACTCCCATTTATTGCCAACGAAGGTCTTaGGAGTGCACTGCGACCCATTATCCCAGAAGCTGCAGCTTTGTT +
Preference number: 5 (lower is better)
Translates to: FASRQVTPIYCQRRS*ECTATHYPRSCSFV
Trigger: AACAAAGCTGCAGCTTCTGGGATAATGGGTCGCAGTGCACTCCCAAGACCTTCGTTGGCAATAAATGGGAGTAACCTGCCTCGAAGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
ENST00000488699.5
CDS GCA 90 bp AACAGGTTGTGCAATTTTGCTTCGAGGCAGGTTACTCCCATTTATTaGCAACGAAGGTCTTGGGAGTGCACTGCGACCCATTATCCCAGA +
Preference number: 5 (lower is better)
Translates to: NRLCNFASRQVTPIY*QRRSWECTATHYPR
Trigger: TCTGGGATAATGGGTCGCAGTGCACTCCCAAGACCTTCGTTGGCAATAAATGGGAGTAACCTGCCTCGAAGCAAAATTGCACAACCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
ENST00000488699.5
CDS-3UTR CAA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTTTGCCAACGAAGGTCTaGGGAGTGCACTGCGACCCA +
Preference number: 5 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVLPTKV*GVHCDP
Trigger: TGGGTCGCAGTGCACTCCCAAGACCTTCGTTGGCAA...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGTTGCCAACGAAGGTCTaGGGAGTGCACTGCGACCCA +
Preference number: 5 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMLPTKV*GVHCDP
Trigger: TGGGTCGCAGTGCACTCCCAAGACCTTCGTTGGCAA...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS TCA 90 bp TTAGTAGCAACCATCTCTCCAATTTCCATCCCTCAGAGTGCTGAGTaGAGACAGAGGCTTTGGAGGCTGAAGAAAACTTCTAACAGGTTG +
Preference number: 5 (lower is better)
Translates to: LVATISPISIPQSAE*RQRLWRLKKTSNRL
Trigger: CAACCTGTTAGAAGTTTTCTTCAGCCTCCAAAGCCTCTGTCTTCACTCAGCACTCTGAGGGATGGAAATTGGAGAGATGGTTGCTACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
ENST00000488699.5
CDS CCA 90 bp AATTCCTCTTTGGAAAGGGGAACATCTTGGAAGACGAGGCTGAGGTaGTGGCAAATGATCAAATTCCTCTTCATCCTCCAGACTGTATTG +
Preference number: 5 (lower is better)
Translates to: NSSLERGTSWKTRLR*WQMIKFLFILQTVL
Trigger: CAATACAGTCTGGAGGATGAAGAGGAATTTGATCATTTGCCACCACCTCAGCCTCGTCTTCCAAGATGTTCCCCTTTCCAAAGAGGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000441784.5
ENST00000442759.5
ENST00000446759.5
ENST00000462234.5
ENST00000465831.1
ENST00000466548.5
ENST00000474663.5
ENST00000488699.5
ENST00000496045.5
CDS-3UTR CAA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGAAAGGGGAACATCTaGGAAGACGAGGCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMGKGNI*EDEAEV
Trigger: CACCTCAGCCTCGTCTTCCAAGATGTTCCCCTTTCC...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGTGCTGCCTTGAACGGTaGGACTCACATAGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMCCLER*DSHRLW
Trigger: CCACAGCCTATGTGAGTCCAACCGTTCAAGGCAGCA...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTCCAGAAGCTGCAGCTTaGTTCGGTGTGGGGATTCCT +
Preference number: 5 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVPEAAA*FGVGIP
Trigger: AGGAATCCCCACACCGAACAAAGCTGCAGCTTCTGG...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGCCAGAAGCTGCAGCTTaGTTCGGTGTGGGGATTCCT +
Preference number: 5 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMPEAAA*FGVGIP
Trigger: AGGAATCCCCACACCGAACAAAGCTGCAGCTTCTGG...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTTTGCCAACGAAGGTCTaGGGAGTGCACTGCGACCCA +
Preference number: 5 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTLPTKV*GVHCDP
Trigger: TGGGTCGCAGTGCACTCCCAAGACCTTCGTTGGCAA...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAATTGCCAACGAAGGTCTaGGGAGTGCACTGCGACCCA +
Preference number: 5 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQLPTKV*GVHCDP
Trigger: TGGGTCGCAGTGCACTCCCAAGACCTTCGTTGGCAA...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGTTGCCAACGAAGGTCTaGGGAGTGCACTGCGACCCA +
Preference number: 5 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKLPTKV*GVHCDP
Trigger: TGGGTCGCAGTGCACTCCCAAGACCTTCGTTGGCAA...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTAAGCCAGTGAGGCAGTaGAAGAGAAGAGACTCCGCC +
Preference number: 5 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVKPVRQ*KRRDSA
Trigger: GGCGGAGTCTCTTCTCTTCAACTGCCTCACTGGCTT...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000314070.9
CDS CCA 90 bp AATACTGTTGCTGCTGGTAATTATTTGAAGGAAAATACTGGGAACTaGGGCTCCTCCTACACTCCCGAATGCTGGAGAAAGTCTGTGAAT +
Preference number: 5 (lower is better)
Translates to: NTVAAGNYLKENTGN*GSSYTPECWRKSVN
Trigger: ATTCACAGACTTTCTCCAGCATTCGGGAGTGTAGGAGGAGCCCCAGTTCCCAGTATTTTCCTTCAAATAATTACCAGCAGCAACAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000441784.5
ENST00000442759.5
ENST00000446759.5
ENST00000465831.1
ENST00000466548.5
ENST00000474663.5
ENST00000488699.5
ENST00000496045.5
CDS-3UTR CAA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGGGAAAGGGGAACATCTaGGAAGACGAGGCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKGKGNI*EDEAEV
Trigger: CACCTCAGCCTCGTCTTCCAAGATGTTCCCCTTTCC...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAATGCTGCCTTGAACGGTaGGACTCACATAGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQCCLER*DSHRLW
Trigger: CCACAGCCTATGTGAGTCCAACCGTTCAAGGCAGCA...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGTGCTGCCTTGAACGGTaGGACTCACATAGGCTGTGG +
Preference number: 5 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKCCLER*DSHRLW
Trigger: CCACAGCCTATGTGAGTCCAACCGTTCAAGGCAGCA...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTCCAGAAGCTGCAGCTTaGTTCGGTGTGGGGATTCCT +
Preference number: 5 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTPEAAA*FGVGIP
Trigger: AGGAATCCCCACACCGAACAAAGCTGCAGCTTCTGG...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAACCAGAAGCTGCAGCTTaGTTCGGTGTGGGGATTCCT +
Preference number: 5 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQPEAAA*FGVGIP
Trigger: AGGAATCCCCACACCGAACAAAGCTGCAGCTTCTGG...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGTTGCCAACGAAGGTCTaGGGAGTGCACTGCGACCCA +
Preference number: 5 (lower is better)
Translates to: LKINCGTVANIAGIKCNELPTKV*GVHCDP
Trigger: TGGGTCGCAGTGCACTCCCAAGACCTTCGTTGGCAA...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS TCA 90 bp CTTGAAATTCCATTTCCAGCTCCATGCAAGCTTGAGTCAAAACTCTaGCTATTTCGCACGGTGACCGGAGAACTAATGTTGCTACTAATG +
Preference number: 5 (lower is better)
Translates to: LEIPFPAPCKLESKL*LFRTVTGELMLLLM
Trigger: CATTAGTAGCAACATTAGTTCTCCGGTCACCGTGCGAAATAGTCAGAGTTTTGACTCAAGCTTGCATGGAGCTGGAAATGGAATTTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000441784.5
ENST00000466548.5
ENST00000488699.5
CDS-3UTR CAA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTCCTGAGACTTTCTTCTaGCAGACGAGCCATGATCTG +
Preference number: 5 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVPETFF*QTSHDL
Trigger: CAGATCATGGCTCGTCTGCAAGAAGAAAGTCTCAGG...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267219.12
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGGGAAAGGGGAACATCTaGGAAGACGAGGCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: LKINCGTVANIAGIKCNEGKGNI*EDEAEV
Trigger: CACCTCAGCCTCGTCTTCCAAGATGTTCCCCTTTCC...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGGTGGGGATTCCTGTGTaGGAATACAGCTGTAAGCCG +
Preference number: 5 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKVGIPV*EYSCKP
Trigger: CGGCTTACAGCTGTATTCCAACACAGGAATCCCCAC...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGTGGGGATTCCTGTGTaGGAATACAGCTGTAAGCCG +
Preference number: 5 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTVGIPV*EYSCKP
Trigger: CGGCTTACAGCTGTATTCCAACACAGGAATCCCCAC...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGCCAGAAGCTGCAGCTTaGTTCGGTGTGGGGATTCCT +
Preference number: 5 (lower is better)
Translates to: LKINCGTVANIAGIKCNEPEAAA*FGVGIP
Trigger: AGGAATCCCCACACCGAACAAAGCTGCAGCTTCTGG...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTCTTCCATCTCAGGAGTaGGGTTATCTAGGACATGTC +
Preference number: 5 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVLPSQE*GYLGHV
Trigger: GACATGTCCTAGATAACCCAACTCCTGAGATGGAAG...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267219.12
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGCTTCCATCTCAGGAGTaGGGTTATCTAGGACATGTC +
Preference number: 5 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMLPSQE*GYLGHV
Trigger: GACATGTCCTAGATAACCCAACTCCTGAGATGGAAG...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267219.12
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTCCTGGAAGTGTAACCTaGCTCCAGTCTAAAGCACAG +
Preference number: 5 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTPGSVT*LQSKAQ
Trigger: CTGTGCTTTAGACTGGAGCAAGGTTACACTTCCAGG...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000267219.12
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAACCTGAGACTTTCTTCTaGCAGACGAGCCATGATCTG +
Preference number: 5 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQPETFF*QTSHDL
Trigger: CAGATCATGGCTCGTCTGCAAGAAGAAAGTCTCAGG...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267219.12
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGCCTGAGACTTTCTTCTaGCAGACGAGCCATGATCTG +
Preference number: 5 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKPETFF*QTSHDL
Trigger: CAGATCATGGCTCGTCTGCAAGAAGAAAGTCTCAGG...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267219.12
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTCATGTTACTGCTGCCTaGAACGGTTGGACTCACATA +
Preference number: 5 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVHVTAA*NGWTHI
Trigger: TATGTGAGTCCAACCGTTCAAGGCAGCAGTAACATG...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGGTGGGGATTCCTGTGTaGGAATACAGCTGTAAGCCG +
Preference number: 5 (lower is better)
Translates to: LKINCGTVANIAGIKCNEVGIPV*EYSCKP
Trigger: CGGCTTACAGCTGTATTCCAACACAGGAATCCCCAC...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTGGTTACTCCCATTTATaGCCAACGAAGGTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVGYSHL*PTKVLG
Trigger: TCCCAAGACCTTCGTTGGCAATAAATGGGAGTAACC...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTACTCCCATTTATaGCCAACGAAGGTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMGYSHL*PTKVLG
Trigger: TCCCAAGACCTTCGTTGGCAATAAATGGGAGTAACC...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTACAGGTTGTGCAATTTaGCTTCGAGGCAGGTTACTC +
Preference number: 5 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVTGCAI*LRGRLL
Trigger: GAGTAACCTGCCTCGAAGCAAAATTGCACAACCTGT...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGCTTCCATCTCAGGAGTaGGGTTATCTAGGACATGTC +
Preference number: 5 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKLPSQE*GYLGHV
Trigger: GACATGTCCTAGATAACCCAACTCCTGAGATGGAAG...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000267219.12
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGCCTGGAAGTGTAACCTaGCTCCAGTCTAAAGCACAG +
Preference number: 5 (lower is better)
Translates to: LKINCGTVANIAGIKCNEPGSVT*LQSKAQ
Trigger: CTGTGCTTTAGACTGGAGCAAGGTTACACTTCCAGG...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000267219.12
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGATGGGGAATTCCTCTTaGGAAAGGGGAACATCTTGG +
Preference number: 5 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKMGNSS*ERGTSW
Trigger: CCAAGATGTTCCCCTTTCCAAAGAGGAATTCCCCAT...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTATGGGGAATTCCTCTTaGGAAAGGGGAACATCTTGG +
Preference number: 5 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTMGNSS*ERGTSW
Trigger: CCAAGATGTTCCCCTTTCCAAAGAGGAATTCCCCAT...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTATTGGTCCTATTTGGTaGCTGATCTGGAGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTIGPIW*LIWSLG
Trigger: GCCCAAACTCCAGATCAGCAACCAAATAGGACCAAT...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAATTGGTCCTATTTGGTaGCTGATCTGGAGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQIGPIW*LIWSLG
Trigger: GCCCAAACTCCAGATCAGCAACCAAATAGGACCAAT...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGCAGCTCCATGCAAGCTaGAGTCAAAACTCTGACTAT +
Preference number: 5 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMQLHAS*SQNSDY
Trigger: ATAGTCAGAGTTTTGACTCAAGCTTGCATGGAGCTG...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTCAGCTCCATGCAAGCTaGAGTCAAAACTCTGACTAT +
Preference number: 5 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVQLHAS*SQNSDY
Trigger: ATAGTCAGAGTTTTGACTCAAGCTTGCATGGAGCTG...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTCATGTTACTGCTGCCTaGAACGGTTGGACTCACATA +
Preference number: 5 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTHVTAA*NGWTHI
Trigger: TATGTGAGTCCAACCGTTCAAGGCAGCAGTAACATG...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAACATGTTACTGCTGCCTaGAACGGTTGGACTCACATA +
Preference number: 5 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQHVTAA*NGWTHI
Trigger: TATGTGAGTCCAACCGTTCAAGGCAGCAGTAACATG...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGGTTACTCCCATTTATaGCCAACGAAGGTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTGYSHL*PTKVLG
Trigger: TCCCAAGACCTTCGTTGGCAATAAATGGGAGTAACC...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGGGTTACTCCCATTTATaGCCAACGAAGGTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKGYSHL*PTKVLG
Trigger: TCCCAAGACCTTCGTTGGCAATAAATGGGAGTAACC...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAGGTTACTCCCATTTATaGCCAACGAAGGTCTTGGGA +
Preference number: 5 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQGYSHL*PTKVLG
Trigger: TCCCAAGACCTTCGTTGGCAATAAATGGGAGTAACC...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAACAGGTTGTGCAATTTaGCTTCGAGGCAGGTTACTC +
Preference number: 5 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQTGCAI*LRGRLL
Trigger: GAGTAACCTGCCTCGAAGCAAAATTGCACAACCTGT...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGACTGCAACCATGGGTTaGAGAATGTTGCAGTATCTC +
Preference number: 5 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMTATMG*RMLQYL
Trigger: GAGATACTGCAACATTCTCAAACCCATGGTTGCAGT...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTACTGCAACCATGGGTTaGAGAATGTTGCAGTATCTC +
Preference number: 5 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVTATMG*RMLQYL
Trigger: GAGATACTGCAACATTCTCAAACCCATGGTTGCAGT...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGAGTAGAAGCATAATCTaGCCTGAGACCTGGAGAGAA +
Preference number: 5 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMSRSII*PETWRE
Trigger: TTCTCTCCAGGTCTCAGGCAAGATTATGCTTCTACT...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000351546.7
CDS-3UTR CAA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGATGGGGAATTCCTCTTaGGAAAGGGGAACATCTTGG +
Preference number: 5 (lower is better)
Translates to: LKINCGTVANIAGIKCNEMGNSS*ERGTSW
Trigger: CCAAGATGTTCCCCTTTCCAAAGAGGAATTCCCCAT...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGATTGGTCCTATTTGGTaGCTGATCTGGAGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: LKINCGTVANIAGIKCNEIGPIW*LIWSLG
Trigger: GCCCAAACTCCAGATCAGCAACCAAATAGGACCAAT...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTCTCCATTGGTCCTATTaGGTTGCTGATCTGGAGTTT +
Preference number: 5 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTLHWSY*VADLEF
Trigger: AAACTCCAGATCAGCAACCAAATAGGACCAATGGAG...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGCTCCATTGGTCCTATTaGGTTGCTGATCTGGAGTTT +
Preference number: 5 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKLHWSY*VADLEF
Trigger: AAACTCCAGATCAGCAACCAAATAGGACCAATGGAG...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTCAGCTCCATGCAAGCTaGAGTCAAAACTCTGACTAT +
Preference number: 5 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTQLHAS*SQNSDY
Trigger: ATAGTCAGAGTTTTGACTCAAGCTTGCATGGAGCTG...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGCAGCTCCATGCAAGCTaGAGTCAAAACTCTGACTAT +
Preference number: 5 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKQLHAS*SQNSDY
Trigger: ATAGTCAGAGTTTTGACTCAAGCTTGCATGGAGCTG...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGCATGTTACTGCTGCCTaGAACGGTTGGACTCACATA +
Preference number: 5 (lower is better)
Translates to: LKINCGTVANIAGIKCNEHVTAA*NGWTHI
Trigger: TATGTGAGTCCAACCGTTCAAGGCAGCAGTAACATG...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGACAGGTTGTGCAATTTaGCTTCGAGGCAGGTTACTC +
Preference number: 5 (lower is better)
Translates to: LKINCGTVANIAGIKCNETGCAI*LRGRLL
Trigger: GAGTAACCTGCCTCGAAGCAAAATTGCACAACCTGT...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAACTGCAACCATGGGTTaGAGAATGTTGCAGTATCTC +
Preference number: 5 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQTATMG*RMLQYL
Trigger: GAGATACTGCAACATTCTCAAACCCATGGTTGCAGT...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTACTGCAACCATGGGTTaGAGAATGTTGCAGTATCTC +
Preference number: 5 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTTATMG*RMLQYL
Trigger: GAGATACTGCAACATTCTCAAACCCATGGTTGCAGT...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGAGTAGAAGCATAATCTaGCCTGAGACTTTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMSRSII*PETFFL
Trigger: CAAGAAGAAAGTCTCAGGCAAGATTATGCTTCTACT...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267219.12
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGATCCTCCAGACTGTATaGGTCATATTCTTGATCACT +
Preference number: 5 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMILQTV*VIFLIT
Trigger: AGTGATCAAGAATATGACCAATACAGTCTGGAGGAT...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTATCCTCCAGACTGTATaGGTCATATTCTTGATCACT +
Preference number: 5 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVILQTV*VIFLIT
Trigger: AGTGATCAAGAATATGACCAATACAGTCTGGAGGAT...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTGCTGCTGGTAATTATTaGAAGGAAAATACTGGGAAC +
Preference number: 5 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVAAGNY*KENTGN
Trigger: GTTCCCAGTATTTTCCTTCAAATAATTACCAGCAGC...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGCTGCTGGTAATTATTaGAAGGAAAATACTGGGAAC +
Preference number: 5 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMAAGNY*KENTGN
Trigger: GTTCCCAGTATTTTCCTTCAAATAATTACCAGCAGC...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGCTCCATTGGTCCTATTaGGTTGCTGATCTGGAGTTT +
Preference number: 5 (lower is better)
Translates to: LKINCGTVANIAGIKCNELHWSY*VADLEF
Trigger: AAACTCCAGATCAGCAACCAAATAGGACCAATGGAG...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGACCGGAGAACTAATGTaGCTACTAATGGCAGTTGTA +
Preference number: 5 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKTGELM*LLMAVV
Trigger: TACAACTGCCATTAGTAGCAACATTAGTTCTCCGGT...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTACCGGAGAACTAATGTaGCTACTAATGGCAGTTGTA +
Preference number: 5 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTTGELM*LLMAVV
Trigger: TACAACTGCCATTAGTAGCAACATTAGTTCTCCGGT...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAACCGGAGAACTAATGTaGCTACTAATGGCAGTTGTA +
Preference number: 5 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQTGELM*LLMAVV
Trigger: TACAACTGCCATTAGTAGCAACATTAGTTCTCCGGT...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGCAGCTCCATGCAAGCTaGAGTCAAAACTCTGACTAT +
Preference number: 5 (lower is better)
Translates to: LKINCGTVANIAGIKCNEQLHAS*SQNSDY
Trigger: ATAGTCAGAGTTTTGACTCAAGCTTGCATGGAGCTG...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGATGGGTTTGAGAATGTaGCAGTATCTCAGGCAAATA +
Preference number: 5 (lower is better)
Translates to: RAVLQKLPRSKCHNTATMMGLRM*QYLRQI
Trigger: TATTTGCCTGAGATACTGCAACATTCTCAAACCCAT...CATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTATGGGTTTGAGAATGTaGCAGTATCTCAGGCAAATA +
Preference number: 5 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVMGLRM*QYLRQI
Trigger: TATTTGCCTGAGATACTGCAACATTCTCAAACCCAT...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTAGTAGAAGCATAATCTaGCCTGAGACTTTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTSRSII*PETFFL
Trigger: CAAGAAGAAAGTCTCAGGCAAGATTATGCTTCTACT...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000267219.12
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGAGTAGAAGCATAATCTaGCCTGAGACTTTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKSRSII*PETFFL
Trigger: CAAGAAGAAAGTCTCAGGCAAGATTATGCTTCTACT...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000267219.12
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAATCCTCCAGACTGTATaGGTCATATTCTTGATCACT +
Preference number: 5 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQILQTV*VIFLIT
Trigger: AGTGATCAAGAATATGACCAATACAGTCTGGAGGAT...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGGCTGCTGGTAATTATTaGAAGGAAAATACTGGGAAC +
Preference number: 5 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKAAGNY*KENTGN
Trigger: GTTCCCAGTATTTTCCTTCAAATAATTACCAGCAGC...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAAGCTGCTGGTAATTATTaGAAGGAAAATACTGGGAAC +
Preference number: 5 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQAAGNY*KENTGN
Trigger: GTTCCCAGTATTTTCCTTCAAATAATTACCAGCAGC...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGATGGGTTTGAGAATGTaGCAGTATCTCAGGCAAATA +
Preference number: 5 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKMGLRM*QYLRQI
Trigger: TATTTGCCTGAGATACTGCAACATTCTCAAACCCAT...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTGGCACAAAATTTAAGTaGTTCCATAGTGGTTCACAT +
Preference number: 5 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVGTKFK*FHSGSH
Trigger: ATGTGAACCACTATGGAACAACTTAAATTTTGTGCC...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp CAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGCAACCATGGGTTTGTCTGGTTATCTCCTaGCAATGCTTCAAATTATGT +
Preference number: 5 (lower is better)
Translates to: QFYKNFLDLSVTILQPWVCLVIS*QCFKLC
Trigger: ACATAATTTGAAGCATTGCAAGGAGATAACCAGACA...AACCCATGGTTGCAGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGAGTAGAAGCATAATCTaGCCTGAGACTTTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: LKINCGTVANIAGIKCNESRSII*PETFFL
Trigger: CAAGAAGAAAGTCTCAGGCAAGATTATGCTTCTACT...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000267219.12
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGTATTGGTCATATTCTaGATCACTACATGTCCCTTT +
Preference number: 5 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTVLVIF*ITTCPF
Trigger: AAAGGGACATGTAGTGATCAAGAATATGACCAATAC...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGGTATTGGTCATATTCTaGATCACTACATGTCCCTTT +
Preference number: 5 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKVLVIF*ITTCPF
Trigger: AAAGGGACATGTAGTGATCAAGAATATGACCAATAC...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTGAAAATCAATTGTGGTACAGTAGCAAACATTGCAGGTATTAAGTGCAATGAGATGGGTTTGAGAATGTaGCAGTATCTCAGGCAAATA +
Preference number: 5 (lower is better)
Translates to: LKINCGTVANIAGIKCNEMGLRM*QYLRQI
Trigger: TATTTGCCTGAGATACTGCAACATTCTCAAACCCAT...CTCATTGCACTTAATACCTGCAATGTTTGCTACTGTACCACAATTGATTTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTGGCACAAAATTTAAGTaGTTCCATAGTGGTTCACAT +
Preference number: 5 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTGTKFK*FHSGSH
Trigger: ATGTGAACCACTATGGAACAACTTAAATTTTGTGCC...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGGGCACAAAATTTAAGTaGTTCCATAGTGGTTCACAT +
Preference number: 5 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKGTKFK*FHSGSH
Trigger: ATGTGAACCACTATGGAACAACTTAAATTTTGTGCC...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TTCAGGTACAGAGCAGTTCTACAAAAACTTCCTAGATCTAAGTGTCACAATACTTGTCTGGTTATCTCCTaGCAATGCTTCAAATTATGT +
Preference number: 5 (lower is better)
Translates to: FRYRAVLQKLPRSKCHNTCLVIS*QCFKLC
Trigger: ACATAATTTGAAGCATTGCAAGGAGATAACCAGACA...AGTATTGTGACACTTAGATCTAGGAAGTTTTTGTAGAACTGCTCTGTACCTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp TGTCTGGTTATCTCCTTGCAATGCTTCAAATTATGTTGTGCTCATTCAACACAATGTCTGGTTATCTCCTaGCAATGCTTCAAATTATGT +
Preference number: 5 (lower is better)
Translates to: CLVISLQCFKLCCAHSTQCLVIS*QCFKLC
Trigger: ACATAATTTGAAGCATTGCAAGGAGATAACCAGACA...TTGTGTTGAATGAGCACAACATAATTTGAAGCATTGCAAGGAGATAACCAGACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS-3UTR CAA 90 bp AATACTGCAACCATGGGTTTGAGAATGTTGCAGTATCTCAGGCAAATATTTAAGTGTCTGGTTATCTCCTaGCAATGCTTCAAATTATGT +
Preference number: 5 (lower is better)
Translates to: NTATMGLRMLQYLRQIFKCLVIS*QCFKLC
Trigger: ACATAATTTGAAGCATTGCAAGGAGATAACCAGACA...CTTAAATATTTGCCTGAGATACTGCAACATTCTCAAACCCATGGTTGCAGTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
CDS CCA 72 bp CTGCCGAGGCGCATTTCACCTGCTCCGCCATCATCGTaGGCCCCGAGGGCGCCGCGGCCGCCGGGGAGTGCG +
Preference number: 6 (lower is better)
Translates to: LPRRISPAPPSS*APRAPRPPGSA
Trigger: CGCACTCCCCGGCGGCCGCGGCGCCCTCGGGGCCCACGATGATGGCGGAGCAGGTGAAATGCGCCTCGGCAG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000418532.6
CDS GCA 72 bp CGGCTCCGGCCCGCCACCGCCCGCGCCGAAGAAGCCTaGTGCCGGCTTGAAGTAGACGAAGGGCGCCTCGGG +
Preference number: 6 (lower is better)
Translates to: RLRPATARAEEA*CRLEVDEGRLG
Trigger: CCCGAGGCGCCCTTCGTCTACTTCAAGCCGGCAGCAGGCTTCTTCGGCGCGGGCGGTGGCGGGCCGGAGCCG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS GCA 72 bp CTCCGGCCCGCCACCGCCCGCGCCGAAGAAGCCTGCTaGCGGCTTGAAGTAGACGAAGGGCGCCTCGGGTGG +
Preference number: 6 (lower is better)
Translates to: LRPATARAEEAC*RLEVDEGRLGW
Trigger: CCACCCGAGGCGCCCTTCGTCTACTTCAAGCCGGCAGCAGGCTTCTTCGGCGCGGGCGGTGGCGGGCCGGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS TCA 72 bp CCGCGTTCACCACCGGCCCGGAGCCCGCTCCAGAGCTaGCCCCTGCCGAGGCGCATTTCACCTGCTCCGCCA +
Preference number: 6 (lower is better)
Translates to: PRSPPARSPLQS*PLPRRISPAPP
Trigger: TGGCGGAGCAGGTGAAATGCGCCTCGGCAGGGGTCAGCTCTGGAGCGGGCTCCGGGCCGGTGGTGAACGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS TCA 72 bp CGCCACCGCCCGCGCCGAAGAAGCCTGCTGCCGGCTTaGAGTAGACGAAGGGCGCCTCGGGTGGCTGCGCCA +
Preference number: 6 (lower is better)
Translates to: RHRPRRRSLLPA*SRRRAPRVAAP
Trigger: TGGCGCAGCCACCCGAGGCGCCCTTCGTCTACTTCAAGCCGGCAGCAGGCTTCTTCGGCGCGGGCGGTGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS GCA 72 bp GCTCCAGAGCTGACCCCTGCCGAGGCGCATTTCACCTaGTCCGCCATCATCGTGGGCCCCGAGGGCGCCGCG +
Preference number: 6 (lower is better)
Translates to: APELTPAEAHFT*SAIIVGPEGAA
Trigger: CGCGGCGCCCTCGGGGCCCACGATGATGGCGGAGCAGGTGAAATGCGCCTCGGCAGGGGTCAGCTCTGGAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS CCA 72 bp TGCTGCCGGCTTGAAGTAGACGAAGGGCGCCTCGGGTaGCTGCGCCAGGCTGCAAAGCAGGGAGGGCGCGGG +
Preference number: 6 (lower is better)
Translates to: CCRLEVDEGRLG*LRQAAKQGGRG
Trigger: CCCGCGCCCTCCCTGCTTTGCAGCCTGGCGCAGCCACCCGAGGCGCCCTTCGTCTACTTCAAGCCGGCAGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS GCA 72 bp CACCACCGGCCCGGAGCCCGCTCCAGAGCTGACCCCTaGCGAGGCGCATTTCACCTGCTCCGCCATCATCGT +
Preference number: 6 (lower is better)
Translates to: HHRPGARSRADP*RGAFHLLRHHR
Trigger: ACGATGATGGCGGAGCAGGTGAAATGCGCCTCGGCAGGGGTCAGCTCTGGAGCGGGCTCCGGGCCGGTGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000418532.6
ENST00000466548.5
CDS GCA 72 bp TCTATAAAGAGAGATCCATCACTGCGCGGCTTCCGATaGCACCCGAGGAGGAAGAGCACGCAAATCCTGTCC +
Preference number: 6 (lower is better)
Translates to: SIKRDPSLRGFR*HPRRKSTQILS
Trigger: GGACAGGATTTGCGTGCTCTTCCTCCTCGGGTGGCATCGGAAGCCGCGCAGTGATGGATCTCTCTTTATAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377236.2
ENST00000488699.5
CDS CAA 90 bp GGTCTTGGGAGTGCACTGCGACCCATTATCCCAGAAGCTGCAGCTTaGTTCGGTGTGGGGATTCCTGTGTTGGAATACAGCTGTAAGCCG +
Preference number: 6 (lower is better)
Translates to: GLGSALRPIIPEAAA*FGVGIPVLEYSCKP
Trigger: CGGCTTACAGCTGTATTCCAACACAGGAATCCCCACACCGAACAAAGCTGCAGCTTCTGGGATAATGGGTCGCAGTGCACTCCCAAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
ENST00000488699.5
CDS GCA 72 bp TCTTGGGAGTGCACTGCGACCCATTATCCCAGAAGCTaGAGCTTTGTTCGGTGTGGGGATTCCTGTGTTGGA +
Preference number: 6 (lower is better)
Translates to: SWECTATHYPRS*SFVRCGDSCVG
Trigger: TCCAACACAGGAATCCCCACACCGAACAAAGCTGCAGCTTCTGGGATAATGGGTCGCAGTGCACTCCCAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
ENST00000488699.5
CDS CCA 72 bp ATAGGCTGTGGCTTTAAGAGGCTGTCGGATAGACACTaGGAAATGCCCCACGCTGTGGACCCTGTGTTGAAG +
Preference number: 6 (lower is better)
Translates to: IGCGFKRLSDRH*EMPHAVDPVLK
Trigger: CTTCAACACAGGGTCCACAGCGTGGGGCATTTCCCAGTGTCTATCCGACAGCCTCTTAAAGCCACAGCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000441784.5
ENST00000466548.5
ENST00000488699.5
CDS CCA 72 bp ACTGGGAACTGGGGCTCCTCCTACACTCCCGAATGCTaGAGAAAGTCTGTGAATGGGGAATTCCTCTTTGGA +
Preference number: 6 (lower is better)
Translates to: TGNWGSSYTPEC*RKSVNGEFLFG
Trigger: TCCAAAGAGGAATTCCCCATTCACAGACTTTCTCCAGCATTCGGGAGTGTAGGAGGAGCCCCAGTTCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000441784.5
ENST00000442759.5
ENST00000446759.5
ENST00000465831.1
ENST00000466548.5
ENST00000474663.5
ENST00000488699.5
ENST00000496045.5
CDS CCA 72 bp AGGCAGGTTACTCCCATTTATTGCCAACGAAGGTCTTaGGAGTGCACTGCGACCCATTATCCCAGAAGCTGC +
Preference number: 6 (lower is better)
Translates to: RQVTPIYCQRRS*ECTATHYPRSC
Trigger: GCAGCTTCTGGGATAATGGGTCGCAGTGCACTCCCAAGACCTTCGTTGGCAATAAATGGGAGTAACCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
ENST00000488699.5
CDS CAA 72 bp AGTGCACTGCGACCCATTATCCCAGAAGCTGCAGCTTaGTTCGGTGTGGGGATTCCTGTGTTGGAATACAGC +
Preference number: 6 (lower is better)
Translates to: SALRPIIPEAAA*FGVGIPVLEYS
Trigger: GCTGTATTCCAACACAGGAATCCCCACACCGAACAAAGCTGCAGCTTCTGGGATAATGGGTCGCAGTGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
ENST00000488699.5
CDS CAA 72 bp GAGGCAGGTTACTCCCATTTATTGCCAACGAAGGTCTaGGGAGTGCACTGCGACCCATTATCCCAGAAGCTG +
Preference number: 6 (lower is better)
Translates to: EAGYSHLLPTKV*GVHCDPLSQKL
Trigger: CAGCTTCTGGGATAATGGGTCGCAGTGCACTCCCAAGACCTTCGTTGGCAATAAATGGGAGTAACCTGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
ENST00000488699.5
CDS TCA 72 bp GACACTGGGAAATGCCCCACGCTGTGGACCCTGTGTTaGAGCTGTCCCGGTGATGGAATACAAGATTGTATT +
Preference number: 6 (lower is better)
Translates to: DTGKCPTLWTLC*SCPGDGIQDCI
Trigger: AATACAATCTTGTATTCCATCACCGGGACAGCTTCAACACAGGGTCCACAGCGTGGGGCATTTCCCAGTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000441784.5
ENST00000466548.5
ENST00000488699.5
CDS CCA 72 bp GACCCATTATCCCAGAAGCTGCAGCTTTGTTCGGTGTaGGGATTCCTGTGTTGGAATACAGCTGTAAGCCGT +
Preference number: 6 (lower is better)
Translates to: DPLSQKLQLCSV*GFLCWNTAVSR
Trigger: ACGGCTTACAGCTGTATTCCAACACAGGAATCCCCACACCGAACAAAGCTGCAGCTTCTGGGATAATGGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
ENST00000488699.5
CDS CAA 72 bp GTGCAATTTTGCTTCGAGGCAGGTTACTCCCATTTATaGCCAACGAAGGTCTTGGGAGTGCACTGCGACCCA +
Preference number: 6 (lower is better)
Translates to: VQFCFEAGYSHL*PTKVLGVHCDP
Trigger: TGGGTCGCAGTGCACTCCCAAGACCTTCGTTGGCAATAAATGGGAGTAACCTGCCTCGAAGCAAAATTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
ENST00000488699.5
CDS CAA 72 bp AGCACAGGGAACGTCTCGCTGCTTCCATCTCAGGAGTaGGGTTATCTAGGACATGTCTACACCACTGCAAAG +
Preference number: 6 (lower is better)
Translates to: STGNVSLLPSQE*GYLGHVYTTAK
Trigger: CTTTGCAGTGGTGTAGACATGTCCTAGATAACCCAACTCCTGAGATGGAAGCAGCGAGACGTTCCCTGTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377236.2
ENST00000418532.6
ENST00000422114.5
ENST00000442759.5
ENST00000446759.5
ENST00000466548.5
ENST00000488699.5
CDS CAA 90 bp TTTTGCTTCGAGGCAGGTTACTCCCATTTATTGCCAACGAAGGTCTaGGGAGTGCACTGCGACCCATTATCCCAGAAGCTGCAGCTTTGT +
Preference number: 6 (lower is better)
Translates to: FCFEAGYSHLLPTKV*GVHCDPLSQKLQLC
Trigger: ACAAAGCTGCAGCTTCTGGGATAATGGGTCGCAGTGCACTCCCAAGACCTTCGTTGGCAATAAATGGGAGTAACCTGCCTCGAAGCAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
ENST00000488699.5
CDS GCA 72 bp ACAGCTGTAAGCCGTTTGATAAAGGCATGTTACTGCTaGCTTGAACGGTTGGACTCACATAGGCTGTGGCTT +
Preference number: 6 (lower is better)
Translates to: TAVSRLIKACYC*LERLDSHRLWL
Trigger: AAGCCACAGCCTATGTGAGTCCAACCGTTCAAGGCAGCAGTAACATGCCTTTATCAAACGGCTTACAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000441784.5
ENST00000466548.5
ENST00000488699.5
CDS CCA 72 bp TTGGAAAGGGGAACATCTTGGAAGACGAGGCTGAGGTaGTGGCAAATGATCAAATTCCTCTTCATCCTCCAG +
Preference number: 6 (lower is better)
Translates to: LERGTSWKTRLR*WQMIKFLFILQ
Trigger: CTGGAGGATGAAGAGGAATTTGATCATTTGCCACCACCTCAGCCTCGTCTTCCAAGATGTTCCCCTTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000441784.5
ENST00000442759.5
ENST00000446759.5
ENST00000462234.5
ENST00000465831.1
ENST00000466548.5
ENST00000474663.5
ENST00000488699.5
ENST00000496045.5
CDS CCA 72 bp GCTGCTGGTAATTATTTGAAGGAAAATACTGGGAACTaGGGCTCCTCCTACACTCCCGAATGCTGGAGAAAG +
Preference number: 6 (lower is better)
Translates to: AAGNYLKENTGN*GSSYTPECWRK
Trigger: CTTTCTCCAGCATTCGGGAGTGTAGGAGGAGCCCCAGTTCCCAGTATTTTCCTTCAAATAATTACCAGCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000441784.5
ENST00000442759.5
ENST00000446759.5
ENST00000465831.1
ENST00000466548.5
ENST00000474663.5
ENST00000488699.5
ENST00000496045.5
CDS CAA 72 bp GTGAATGGGGAATTCCTCTTTGGAAAGGGGAACATCTaGGAAGACGAGGCTGAGGTGGTGGCAAATGATCAA +
Preference number: 6 (lower is better)
Translates to: VNGEFLFGKGNI*EDEAEVVANDQ
Trigger: TTGATCATTTGCCACCACCTCAGCCTCGTCTTCCAAGATGTTCCCCTTTCCAAAGAGGAATTCCCCATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000441784.5
ENST00000442759.5
ENST00000446759.5
ENST00000462234.5
ENST00000465831.1
ENST00000466548.5
ENST00000474663.5
ENST00000488699.5
ENST00000496045.5
CDS CAA 72 bp GAAGCTGCAGCTTTGTTCGGTGTGGGGATTCCTGTGTaGGAATACAGCTGTAAGCCGTTTGATAAAGGCATG +
Preference number: 6 (lower is better)
Translates to: EAAALFGVGIPV*EYSCKPFDKGM
Trigger: CATGCCTTTATCAAACGGCTTACAGCTGTATTCCAACACAGGAATCCCCACACCGAACAAAGCTGCAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
ENST00000488699.5
CDS CAA 90 bp TGTTCGGTGTGGGGATTCCTGTGTTGGAATACAGCTGTAAGCCGTTaGATAAAGGCATGTTACTGCTGCCTTGAACGGTTGGACTCACAT +
Preference number: 6 (lower is better)
Translates to: CSVWGFLCWNTAVSR*IKACYCCLERLDSH
Trigger: ATGTGAGTCCAACCGTTCAAGGCAGCAGTAACATGCCTTTATCAAACGGCTTACAGCTGTATTCCAACACAGGAATCCCCACACCGAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
ENST00000488699.5
CDS CAA 90 bp ATTATCCCAGAAGCTGCAGCTTTGTTCGGTGTGGGGATTCCTGTGTaGGAATACAGCTGTAAGCCGTTTGATAAAGGCATGTTACTGCTG +
Preference number: 6 (lower is better)
Translates to: IIPEAAALFGVGIPV*EYSCKPFDKGMLLL
Trigger: CAGCAGTAACATGCCTTTATCAAACGGCTTACAGCTGTATTCCAACACAGGAATCCCCACACCGAACAAAGCTGCAGCTTCTGGGATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
ENST00000488699.5
CDS TCA 72 bp CCATTTCCAGCTCCATGCAAGCTTGAGTCAAAACTCTaGCTATTTCGCACGGTGACCGGAGAACTAATGTTG +
Preference number: 6 (lower is better)
Translates to: PFPAPCKLESKL*LFRTVTGELML
Trigger: CAACATTAGTTCTCCGGTCACCGTGCGAAATAGTCAGAGTTTTGACTCAAGCTTGCATGGAGCTGGAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000441784.5
ENST00000466548.5
ENST00000488699.5
CDS GCA 72 bp AATACAGCTGTAAGCCGTTTGATAAAGGCATGTTACTaGTGCCTTGAACGGTTGGACTCACATAGGCTGTGG +
Preference number: 6 (lower is better)
Translates to: NTAVSRLIKACY*CLERLDSHRLW
Trigger: CCACAGCCTATGTGAGTCCAACCGTTCAAGGCAGCAGTAACATGCCTTTATCAAACGGCTTACAGCTGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000441784.5
ENST00000466548.5
ENST00000488699.5
CDS CAA 90 bp AGAAAGTCTGTGAATGGGGAATTCCTCTTTGGAAAGGGGAACATCTaGGAAGACGAGGCTGAGGTGGTGGCAAATGATCAAATTCCTCTT +
Preference number: 6 (lower is better)
Translates to: RKSVNGEFLFGKGNI*EDEAEVVANDQIPL
Trigger: AAGAGGAATTTGATCATTTGCCACCACCTCAGCCTCGTCTTCCAAGATGTTCCCCTTTCCAAAGAGGAATTCCCCATTCACAGACTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000441784.5
ENST00000442759.5
ENST00000446759.5
ENST00000462234.5
ENST00000465831.1
ENST00000466548.5
ENST00000474663.5
ENST00000488699.5
ENST00000496045.5
CDS CAA 72 bp GCATACTTCTTCGGAGCTTATCTCCATTGGTCCTATTaGGTTGCTGATCTGGAGTTTGGGCTTGAGGTGAAT +
Preference number: 6 (lower is better)
Translates to: AYFFGAYLHWSY*VADLEFGLEVN
Trigger: ATTCACCTCAAGCCCAAACTCCAGATCAGCAACCAAATAGGACCAATGGAGATAAGCTCCGAAGAAGTATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000267219.12
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000441784.5
ENST00000442759.5
ENST00000466548.5
ENST00000474663.5
ENST00000488699.5
CDS TCA 72 bp TGCCTGAGACTTTCTTCTTGCAGACGAGCCATGATCTaGACATCAGTGAGGTCCTGTAATTTATATCCCATG +
Preference number: 6 (lower is better)
Translates to: CLRLSSCRRAMI*TSVRSCNLYPM
Trigger: CATGGGATATAAATTACAGGACCTCACTGATGTTCAGATCATGGCTCGTCTGCAAGAAGAAAGTCTCAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000267219.12
ENST00000358679.3
ENST00000418532.6
ENST00000422114.5
ENST00000441784.5
ENST00000442759.5
ENST00000446759.5
ENST00000462234.5
ENST00000466548.5
ENST00000474663.5
ENST00000488699.5
ENST00000496045.5
CDS CCA 72 bp ATGCCTGAACCTCCCCCTCTGCCTGTATATTCCAAGTaGAAGCCTCATTTTGCTAGTTTAGAAAGAACACAT +
Preference number: 6 (lower is better)
Translates to: MPEPPPLPVYSK*KPHFASLERTH
Trigger: ATGTGTTCTTTCTAAACTAGCAAAATGAGGCTTCCACTTGGAATATACAGGCAGAGGGGGAGGTTCAGGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000351546.7
ENST00000465831.1
CDS CAA 72 bp AACCTGTTCATTCCACTCCAAGAAAAGTCCTCTTTATaGGCACTATTTATGGGAAAGCCAGTGAGGTCACCC +
Preference number: 6 (lower is better)
Translates to: NLFIPLQEKSSL*ALFMGKPVRSP
Trigger: GGGTGACCTCACTGGCTTTCCCATAAATAGTGCCAATAAAGAGGACTTTTCTTGGAGTGGAATGAACAGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377236.2
CDS GCA 72 bp AGGCTTTGGAGGCTGAAGAAAACTTCTAACAGGTTGTaGAATTTTGCTTCGAGGCAGGTTACTCCCATTTAT +
Preference number: 6 (lower is better)
Translates to: RLWRLKKTSNRL*NFASRQVTPIY
Trigger: ATAAATGGGAGTAACCTGCCTCGAAGCAAAATTGCACAACCTGTTAGAAGTTTTCTTCAGCCTCCAAAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000267219.12
ENST00000314070.9
ENST00000351546.7
ENST00000358679.3
ENST00000418532.6
ENST00000466548.5
ENST00000488699.5
CDS TCA 72 bp GAACACATACTTTCTTCTTGCAGACGAGCCATGATCTaGACATCAGTGAGGTCCTGTAATTTATATCCCATG +
Preference number: 6 (lower is better)
Translates to: EHILSSCRRAMI*TSVRSCNLYPM
Trigger: CATGGGATATAAATTACAGGACCTCACTGATGTTCAGATCATGGCTCGTCTGCAAGAAGAAAGTATGTGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000351546.7
ENST00000465831.1