Pregenerated sensors for SIT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000137078Ensembl transcript IDs: ENST00000259608.8, ENST00000474403.1, ENST00000486859.5, ENST00000618781.1
Found 149 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTCCAGTCTGTaGACTCCTGAGGAATATACCCACCCACCCACTGTCAGGCCCTTA | + |
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Preference number: 1 (lower is better) Translates to: ARVPPVSKFQVHSSL*TPEEYTHPPTVRPL Trigger: TAAGGGCCTGACAGTGGGTGGGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR TCA 90 bp | GCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGAGTAGATCACATCCTGTaGCTTGGCAATGGCGCCCGT | + |
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Preference number: 2 (lower is better) Translates to: ARLGSLPSLSSRSTPVCGVDHIL*LGNGAR Trigger: ACGGGCGCCATTGCCAAGTCACAGGATGTGATCTAC...TCCACAGACTGGAGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR TCA 90 bp | GTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTCCAGTGTAGATCACATCCTGTaGCTTGGCAATGGCGCCCGT | + |
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Preference number: 2 (lower is better) Translates to: VKSQARVPPVSKFQVHSSVDHIL*LGNGAR Trigger: ACGGGCGCCATTGCCAAGTCACAGGATGTGATCTAC...ACTGGAGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR GCA 90 bp | GTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTCCAGTGGGGGCTACTGTCTTTaGCTCCTCCATCACGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: VKSQARVPPVSKFQVHSSGGYCL*LLHHES Trigger: GCTTTCGTGATGGAGGAGGCAAAGACAGTAGCCCCC...ACTGGAGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR CCA 90 bp | GCTAGGGTTCTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCCCTGTGACTTGGCAATaGCGCCCGTCTTTGGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: ARVLRSKARLGSLPSLSSPVTWQ*RPSLGA Trigger: AGCACCCAAAGACGGGCGCCATTGCCAAGTCACAGG...GGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAGAACCCTAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR CCA 90 bp | CTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTCCTGTGACTTGGCAATaGCGCCCGTCTTTGGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: LRSKARLGSLPSLSSRSTPVTWQ*RPSLGA Trigger: AGCACCCAAAGACGGGCGCCATTGCCAAGTCACAGG...AGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR CCA 90 bp | GCTAGGGTTCTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCCCCGTCTTTGGGTGCTaGTTGGGAAACAGTCATGCC | + |
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Preference number: 2 (lower is better) Translates to: ARVLRSKARLGSLPSLSSPVFGC*LGNSHA Trigger: GGCATGACTGTTTCCCAACCAGCACCCAAAGACGGG...GGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAGAACCCTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR CCA 90 bp | CTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTAATGGCGCCCGTCTTTaGGTGCTGGTTGGGAAACAG | + |
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Preference number: 2 (lower is better) Translates to: LRSKARLGSLPSLSSRSTNGARL*VLVGKQ Trigger: CTGTTTCCCAACCAGCACCCAAAGACGGGCGCCATT...AGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR TCA 90 bp | TCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCTGCCTGAGGAGACACTaGGGCGTGGGGGTAGACTAT | + |
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Preference number: 2 (lower is better) Translates to: SLSSRSTPVCGLLRNIPTCLRRH*GVGVDY Trigger: ATAGTCTACCCCCACGCCTCAGTGTCTCCTCAGGCA...GGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR GCA 90 bp | CCCGTCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCGGGGGCTACTGTCTTTaGCTCCTCCATCACGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: PVSKFQVHSSLWTPEEYTGGYCL*LLHHES Trigger: GCTTTCGTGATGGAGGAGGCAAAGACAGTAGCCCCC...GGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGACGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR GCA 90 bp | TCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCGCGCCCGTCTTTGGGTaGTGGTTGGGAAACAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: SLSSRSTPVCGLLRNIPTAPVFG*WLGNSH Trigger: ATGACTGTTTCCCAACCAGCACCCAAAGACGGGCGC...GGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR GCA 90 bp | AGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCCACCCACCATCACGAAAGCTTTaGCCTGAGATGTCTCCCTTG | + |
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Preference number: 2 (lower is better) Translates to: SSRSTPVCGLLRNIPTHPPSRKL*PEMSPL Trigger: CAAGGGAGACATCTCAGGGCAAAGCTTTCGTGATGG...TGGGTGGGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR CCA 90 bp | CCCGTCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCTCTTTGGGTGCTGGTTaGGAAACAGTCATGCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: PVSKFQVHSSLWTPEEYTSLGAG*ETVMPL Trigger: CAGGGGCATGACTGTTTCCCAACCAGCACCCAAAGA...GGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGACGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR CCA 90 bp | CCCGTCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCTCACATCCTGTGACTTaGCAATGGCGCCCGTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: PVSKFQVHSSLWTPEEYTSHPVT*QWRPSL Trigger: CAAAGACGGGCGCCATTGCCAAGTCACAGGATGTGA...GGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGACGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR CCA 90 bp | TCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCGGGGTGGGGAGGATCTaGTTAAACTCCAGAAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: SLSSRSTPVCGLLRNIPTGVGRI*LNSRRR Trigger: CCTTCTTCTGGAGTTTAACCAGATCCTCCCCACCCC...GGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR TCA 90 bp | TCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCCTGAGATGTCTCCCTTaGAGCTCAGATAGGAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: SLSSRSTPVCGLLRNIPTLRCLP*SSDRKS Trigger: GGACTTCCTATCTGAGCTTCAAGGGAGACATCTCAG...GGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR GCA 90 bp | AAAGAAATAAGGAGGGGGCTACTGTCTTTGCCTCCTCCATCACGAAAGCTTTGCGCGCCCGTCTTTGGGTaGTGGTTGGGAAACAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: KEIRRGLLSLPPPSRKLCAPVFG*WLGNSH Trigger: ATGACTGTTTCCCAACCAGCACCCAAAGACGGGCGC...GCAAAGCTTTCGTGATGGAGGAGGCAAAGACAGTAGCCCCCTCCTTATTTCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR CCA 90 bp | CCAGAAGAAGGAAGTGAGAACCTGGGAGTTTGGGGGCTAAGAGGAACAGATAGATCTTTGGGTGCTGGTTaGGAAACAGTCATGCCCCTG | + |
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Preference number: 2 (lower is better) Translates to: PEEGSENLGVWGLRGTDRSLGAG*ETVMPL Trigger: CAGGGGCATGACTGTTTCCCAACCAGCACCCAAAGA...TCTATCTGTTCCTCTTAGCCCCCAAACTCCCAGGTTCTCACTTCCTTCTTCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR CCA 90 bp | AAAGAAATAAGGAGGGGGCTACTGTCTTTGCCTCCTCCATCACGAAAGCTTTGCCCCGTCTTTGGGTGCTaGTTGGGAAACAGTCATGCC | + |
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Preference number: 2 (lower is better) Translates to: KEIRRGLLSLPPPSRKLCPVFGC*LGNSHA Trigger: GGCATGACTGTTTCCCAACCAGCACCCAAAGACGGG...GCAAAGCTTTCGTGATGGAGGAGGCAAAGACAGTAGCCCCCTCCTTATTTCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR CCA 90 bp | AAAGAAATAAGGAGGGGGCTACTGTCTTTGCCTCCTCCATCACGAAAGCTTTGCTCACATCCTGTGACTTaGCAATGGCGCCCGTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: KEIRRGLLSLPPPSRKLCSHPVT*QWRPSL Trigger: CAAAGACGGGCGCCATTGCCAAGTCACAGGATGTGA...GCAAAGCTTTCGTGATGGAGGAGGCAAAGACAGTAGCCCCCTCCTTATTTCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR TCA 90 bp | AAAGAAATAAGGAGGGGGCTACTGTCTTTGCCTCCTCCATCACGAAAGCTTTGCCTGAGATGTCTCCCTTaGAGCTCAGATAGGAAGTCC | + |
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Preference number: 2 (lower is better) Translates to: KEIRRGLLSLPPPSRKLCLRCLP*SSDRKS Trigger: GGACTTCCTATCTGAGCTTCAAGGGAGACATCTCAG...GCAAAGCTTTCGTGATGGAGGAGGCAAAGACAGTAGCCCCCTCCTTATTTCTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR CAA 90 bp | GCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACAATGGCGCCCGTCTTaGGGTGCTGGTTGGGAAACA | + |
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Preference number: 3 (lower is better) Translates to: ARLGSLPSLSSRSTPVCGQWRPS*GAGWET Trigger: TGTTTCCCAACCAGCACCCAAAGACGGGCGCCATTG...TCCACAGACTGGAGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR GCA 72 bp | ACATCCTGTGACTTGGCAATGGCGCCCGTCTTTGGGTaGTGGTTGGGAAACAGTCATGCCCCTGCTACGGGG | + |
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Preference number: 3 (lower is better) Translates to: TSCDLAMAPVFG*WLGNSHAPATG Trigger: CCCCGTAGCAGGGGCATGACTGTTTCCCAACCAGCACCCAAAGACGGGCGCCATTGCCAAGTCACAGGATGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR CAA 90 bp | GCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGAATCACATCCTGTGACTaGGCAATGGCGCCCGTCTTT | + |
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Preference number: 3 (lower is better) Translates to: ARLGSLPSLSSRSTPVCGITSCD*AMAPVF Trigger: AAAGACGGGCGCCATTGCCAAGTCACAGGATGTGAT...TCCACAGACTGGAGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR CAA 90 bp | ATTCTCCTGCTAGGGTTCTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCCAATGGCGCCCGTCTTaGGGTGCTGGTTGGGAAACA | + |
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Preference number: 3 (lower is better) Translates to: ILLLGFLGQKPGSGPSRLQWRPS*GAGWET Trigger: TGTTTCCCAACCAGCACCCAAAGACGGGCGCCATTG...GAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAGAACCCTAGCAGGAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR CAA 90 bp | ATTCTCCTGCTAGGGTTCTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCGTCTTTGGGTGCTGGTaGGGAAACAGTCATGCCCCT | + |
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Preference number: 3 (lower is better) Translates to: ILLLGFLGQKPGSGPSRLVFGCW*GNSHAP Trigger: AGGGGCATGACTGTTTCCCAACCAGCACCCAAAGAC...GAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAGAACCCTAGCAGGAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR CAA 90 bp | CTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTAGGGGGCTACTGTCTTaGCCTCCTCCATCACGAAAG | + |
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Preference number: 3 (lower is better) Translates to: LRSKARLGSLPSLSSRSTRGLLS*PPPSRK Trigger: CTTTCGTGATGGAGGAGGCAAAGACAGTAGCCCCCT...AGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR CCA 72 bp | CCTCCCGTCTCTAAGTTCCAGGTCCACTCCAGTCTGTaGACTCCTGAGGAATATACCCACCCACCCACTGTC | + |
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Preference number: 3 (lower is better) Translates to: PPVSKFQVHSSL*TPEEYTHPPTV Trigger: GACAGTGGGTGGGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGACGGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR-3UTR CAA 90 bp | AGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCCACCCAGTCTTTGGGTGCTGGTaGGGAAACAGTCATGCCCCT | + |
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Preference number: 3 (lower is better) Translates to: SSRSTPVCGLLRNIPTHPVFGCW*GNSHAP Trigger: AGGGGCATGACTGTTTCCCAACCAGCACCCAAAGAC...TGGGTGGGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR TCA 72 bp | AGCTCAGATAGGAAGTCCGGGGTAGATCACATCCTGTaGCTTGGCAATGGCGCCCGTCTTTGGGTGCTGGTT | + |
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Preference number: 3 (lower is better) Translates to: SSDRKSGVDHIL*LGNGARLWVLV Trigger: AACCAGCACCCAAAGACGGGCGCCATTGCCAAGTCACAGGATGTGATCTACCCCGGACTTCCTATCTGAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| 3UTR TCA 72 bp | CTCCATCACGAAAGCTTTGCCCTGAGATGTCTCCCTTaGAGCTCAGATAGGAAGTCCGGGGTAGATCACATC | + |
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Preference number: 3 (lower is better) Translates to: LHHESFALRCLP*SSDRKSGVDHI Trigger: GATGTGATCTACCCCGGACTTCCTATCTGAGCTTCAAGGGAGACATCTCAGGGCAAAGCTTTCGTGATGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR TCA 90 bp | CTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTCCGGGGATCCGACCCTaGGGAGGCCGCAGCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LRSKARLGSLPSLSSRSTPGIRP*GGRSCR Trigger: CCTGCAGCTGCGGCCTCCTCAGGGTCGGATCCCCGG...AGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR GCA 90 bp | GTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTCCAGTGTGCACGCCCCGCTGTaGCAGGCCCTCCATCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: VKSQARVPPVSKFQVHSSVHAPL*QALHLS Trigger: GCTGAGATGGAGGGCCTGGCACAGCGGGGCGTGCAC...ACTGGAGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR CCA 90 bp | ATCACATCCTGTGACTTGGCAATGGCGCCCGTCTTTGGGTGCTGGTTGGGAAACCGTCCCTGCCCCGGATaGCTCCTGCTCCGGCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: ITSCDLAMAPVFGCWLGNRPCPG*LLLRPL Trigger: CAGGGGCCGGAGCAGGAGCCATCCGGGGCAGGGACG...GTTTCCCAACCAGCACCCAAAGACGGGCGCCATTGCCAAGTCACAGGATGTGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR CCA 90 bp | AGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCCACCCACGTCCCTGCCCCGGATaGCTCCTGCTCCGGCCCCTG | + |
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Preference number: 4 (lower is better) Translates to: SSRSTPVCGLLRNIPTHPRPCPG*LLLRPL Trigger: CAGGGGCCGGAGCAGGAGCCATCCGGGGCAGGGACG...TGGGTGGGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR GCA 90 bp | ATCACATCCTGTGACTTGGCAATGGCGCCCGTCTTTGGGTGCTGGTTGGGAAACGCCCCGGATGGCTCCTaGTCCGGCCCCTGGTCCACT | + |
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Preference number: 4 (lower is better) Translates to: ITSCDLAMAPVFGCWLGNAPDGS*SGPWST Trigger: AGTGGACCAGGGGCCGGAGCAGGAGCCATCCGGGGC...GTTTCCCAACCAGCACCCAAAGACGGGCGCCATTGCCAAGTCACAGGATGTGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR GCA 90 bp | GTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTCCAGTGCACATCACCTCCTCTaGAGCCCTGGCAGGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: VKSQARVPPVSKFQVHSSAHHLL*SPGRAS Trigger: GGAGGCCCTGCCAGGGCTGCAGAGGAGGTGATGTGC...ACTGGAGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR GCA 90 bp | CTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTAGGAGGCCCGGGCCCTaGGGGTCTGGGCACATACTG | + |
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Preference number: 4 (lower is better) Translates to: LRSKARLGSLPSLSSRSTRRPGP*GSGHIL Trigger: CAGTATGTGCCCAGACCCGCAGGGCCCGGGCCTCCT...AGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR CCA 90 bp | GCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTGCAGGCTGGCTGTTaGCATAGGCCTGATCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: ARLGSLPSLSSRSTPVCGLQAGC*HRPDPG Trigger: TCCCGGATCAGGCCTATGCCAACAGCCAGCCTGCAG...TCCACAGACTGGAGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR CCA 90 bp | GCTAGGGTTCTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCTCGGGGCCCGAGGCCTaGGACTTTGGCTCAGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: ARVLRSKARLGSLPSLSSSGPEA*DFGSES Trigger: GGACTCTGAGCCAAAGTCCCAGGCCTCGGGCCCCGA...GGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAGAACCCTAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR TCA 90 bp | GCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACAGTCTGTGGACTCCTaGGGAATATACCCACCCACC | + |
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Preference number: 4 (lower is better) Translates to: ARLGSLPSLSSRSTPVCGQSVDS*GIYPPT Trigger: GGTGGGTGGGTATATTCCTCAGGAGTCCACAGACTG...TCCACAGACTGGAGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR GCA 90 bp | ATCACATCCTGTGACTTGGCAATGGCGCCCGTCTTTGGGTGCTGGTTGGGAAACGCACATCACCTCCTCTaGAGCCCTGGCAGGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: ITSCDLAMAPVFGCWLGNAHHLL*SPGRAS Trigger: GGAGGCCCTGCCAGGGCTGCAGAGGAGGTGATGTGC...GTTTCCCAACCAGCACCCAAAGACGGGCGCCATTGCCAAGTCACAGGATGTGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR CCA 90 bp | GCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGAAATGGCGCCCGTCTTTaGGTGCTGGTTGGGAAACAG | + |
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Preference number: 4 (lower is better) Translates to: ARLGSLPSLSSRSTPVCGNGARL*VLVGKQ Trigger: CTGTTTCCCAACCAGCACCCAAAGACGGGCGCCATT...TCCACAGACTGGAGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR TCA 90 bp | AAAGAAATAAGGAGGGGGCTACTGTCTTTGCCTCCTCCATCACGAAAGCTTTGCCCGGGGATCCGACCCTaGGGAGGCCGCAGCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: KEIRRGLLSLPPPSRKLCPGIRP*GGRSCR Trigger: CCTGCAGCTGCGGCCTCCTCAGGGTCGGATCCCCGG...GCAAAGCTTTCGTGATGGAGGAGGCAAAGACAGTAGCCCCCTCCTTATTTCTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR GCA 90 bp | CCAGAAGAAGGAAGTGAGAACCTGGGAGTTTGGGGGCTAAGAGGAACAGATAGAGCCCCGGATGGCTCCTaGTCCGGCCCCTGGTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: PEEGSENLGVWGLRGTDRAPDGS*SGPWST Trigger: AGTGGACCAGGGGCCGGAGCAGGAGCCATCCGGGGC...TCTATCTGTTCCTCTTAGCCCCCAAACTCCCAGGTTCTCACTTCCTTCTTCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR GCA 90 bp | CCCGTCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCTCTCCAGAGCGTCCCTaGCCCGGATGGCTCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PVSKFQVHSSLWTPEEYTSPERP*PGWLLL Trigger: GAGCAGGAGCCATCCGGGGCAGGGACGCTCTGGAGA...GGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGACGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000259608.8 |
||
| CDS-3UTR GCA 90 bp | TCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCGTGCACGCCCCGCTGTaGCAGGCCCTCCATCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSSRSTPVCGLLRNIPTVHAPL*QALHLS Trigger: GCTGAGATGGAGGGCCTGGCACAGCGGGGCGTGCAC...GGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | GCTAGGGTTCTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCCCCAGGCCTGGGTTATaGAGGGGATTCCCAGTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: ARVLRSKARLGSLPSLSSPRPGL*RGFPVR Trigger: TCGCACTGGGAATCCCCTCCATAACCCAGGCCTGGG...GGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAGAACCCTAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | AGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCCACCCATCCTGCTCCGGCCCCTaGTCCACTGGGACAAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SSRSTPVCGLLRNIPTHPSCSGP*STGTSV Trigger: CACACTTGTCCCAGTGGACCAGGGGCCGGAGCAGGA...TGGGTGGGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | CTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTCTGCAGGCTGGCTGTTaGCATAGGCCTGATCCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRSKARLGSLPSLSSRSTLQAGC*HRPDPG Trigger: TCCCGGATCAGGCCTATGCCAACAGCCAGCCTGCAG...AGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR TCA 90 bp | AGATCACATCCTGTGACTTGGCAATGGCGCCCGTCTTTGGGTGCTGGTTGGGAAACAAGCACACTGCTCTaGGCCGAGGGTCAGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RSHPVTWQWRPSLGAGWETSTLL*AEGQPG Trigger: ACCAGGCTGACCCTCGGCTCAGAGCAGTGTGCTTGT...TTCCCAACCAGCACCCAAAGACGGGCGCCATTGCCAAGTCACAGGATGTGATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR TCA 90 bp | GTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTCCAGTCAGTCTGTGGACTCCTaGGGAATATACCCACCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VKSQARVPPVSKFQVHSSQSVDS*GIYPPT Trigger: GGTGGGTGGGTATATTCCTCAGGAGTCCACAGACTG...ACTGGAGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR GCA 90 bp | TCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCTTCACCCACCGTCCCTaGCCCGGATGGCTCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLSSRSTPVCGLLRNIPTFTHRP*PGWLLL Trigger: GAGCAGGAGCCATCCGGGGCAGGGACGGTGGGTGAA...GGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | CTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTGGTCAGCCTGGTTCATaGCCTGACGGTTTCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRSKARLGSLPSLSSRSTGQPGS*PDGFHS Trigger: GCTGTGGAAACCGTCAGGCCATGAACCAGGCTGACC...AGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | CTCCCGTCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACGGCCCCTGGTCCACTaGGACAAGTGTGCAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPSLSSRSTPVCGLLRNIRPLVH*DKCAAS Trigger: GCTGGCTGCACACTTGTCCCAGTGGACCAGGGGCCG...TATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGACGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | CTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTAGGGCCTCCAAGAGTTaGATCCTGCTGGTCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRSKARLGSLPSLSSRSTRASKS*ILLVWL Trigger: GAGCCAGACCAGCAGGATCCAACTCTTGGAGGCCCT...AGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | GTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTCCAGTCCCGTCTTTGGGTGCTaGTTGGGAAACAGTCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: VKSQARVPPVSKFQVHSSPVFGC*LGNSHA Trigger: GGCATGACTGTTTCCCAACCAGCACCCAAAGACGGG...ACTGGAGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | GCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGAGTCCACTCCAGTCTGTaGACTCCTGAGGAATATACC | + |
|
Preference number: 4 (lower is better) Translates to: ARLGSLPSLSSRSTPVCGVHSSL*TPEEYT Trigger: GGTATATTCCTCAGGAGTCCACAGACTGGAGTGGAC...TCCACAGACTGGAGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR TCA 90 bp | GCTAGGGTTCTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCGTAGATCACATCCTGTaGCTTGGCAATGGCGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: ARVLRSKARLGSLPSLSSVDHIL*LGNGAR Trigger: ACGGGCGCCATTGCCAAGTCACAGGATGTGATCTAC...GGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAGAACCCTAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR TCA 90 bp | ATTCTCCTGCTAGGGTTCTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCGTAGATCACATCCTGTaGCTTGGCAATGGCGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: ILLLGFLGQKPGSGPSRLVDHIL*LGNGAR Trigger: ACGGGCGCCATTGCCAAGTCACAGGATGTGATCTAC...GAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAGAACCCTAGCAGGAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR GCA 90 bp | AGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCCACCCAAGTCCACAAGCACACTaGTCTGAGCCGAGGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSRSTPVCGLLRNIPTHPSPQAH*SEPRVS Trigger: GCTGACCCTCGGCTCAGAGCAGTGTGCTTGTGGACT...TGGGTGGGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR GCA 90 bp | ATTCTCCTGCTAGGGTTCTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCGTGCGAGTAGATCCGTaGAGTTGTCGCCTCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILLLGFLGQKPGSGPSRLVRVDP*SCRLCS Trigger: TGAGCAGAGGCGACAACTGCACGGATCTACTCGCAC...GAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAGAACCCTAGCAGGAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR GCA 90 bp | ATTCTCCTGCTAGGGTTCTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCCCAAGAGTTGGATCCTaGTGGTCTGGCTCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILLLGFLGQKPGSGPSRLPRVGS*WSGSGS Trigger: AGACCCAGAGCCAGACCAGCAGGATCCAACTCTTGG...GAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAGAACCCTAGCAGGAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR GCA 90 bp | AAAGAAATAAGGAGGGGGCTACTGTCTTTGCCTCCTCCATCACGAAAGCTTTGCAGGAGGCCCGGGCCCTaGGGGTCTGGGCACATACTG | + |
|
Preference number: 4 (lower is better) Translates to: KEIRRGLLSLPPPSRKLCRRPGP*GSGHIL Trigger: CAGTATGTGCCCAGACCCGCAGGGCCCGGGCCTCCT...GCAAAGCTTTCGTGATGGAGGAGGCAAAGACAGTAGCCCCCTCCTTATTTCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR GCA 90 bp | CTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTGCGCCCGTCTTTGGGTaGTGGTTGGGAAACAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LRSKARLGSLPSLSSRSTAPVFG*WLGNSH Trigger: ATGACTGTTTCCCAACCAGCACCCAAAGACGGGCGC...AGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | ATCACATCCTGTGACTTGGCAATGGCGCCCGTCTTTGGGTGCTGGTTGGGAAACGGTCAGCCTGGTTCATaGCCTGACGGTTTCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: ITSCDLAMAPVFGCWLGNGQPGS*PDGFHS Trigger: GCTGTGGAAACCGTCAGGCCATGAACCAGGCTGACC...GTTTCCCAACCAGCACCCAAAGACGGGCGCCATTGCCAAGTCACAGGATGTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR CCA 90 bp | TCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCCCTCCTCTGCAGCCCTaGCAGGGCCTCCAAGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLSSRSTPVCGLLRNIPTPPLQP*QGLQEL Trigger: CAACTCTTGGAGGCCCTGCCAGGGCTGCAGAGGAGG...GGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | AGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCCACCCAGCCGCAGCTGCAGGCTaGTATAGCACATCACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSRSTPVCGLLRNIPTHPAAAAG*YSTSPP Trigger: AGGAGGTGATGTGCTATACCAGCCTGCAGCTGCGGC...TGGGTGGGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR CCA 90 bp | AGATCACATCCTGTGACTTGGCAATGGCGCCCGTCTTTGGGTGCTGGTTGGGAAGCCGCAGCTGCAGGCTaGTATAGCACATCACCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSHPVTWQWRPSLGAGWEAAAAG*YSTSPP Trigger: AGGAGGTGATGTGCTATACCAGCCTGCAGCTGCGGC...TTCCCAACCAGCACCCAAAGACGGGCGCCATTGCCAAGTCACAGGATGTGATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR TCA 90 bp | TCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCACAAGCACACTGCTCTaGGCCGAGGGTCAGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLSSRSTPVCGLLRNIPTTSTLL*AEGQPG Trigger: ACCAGGCTGACCCTCGGCTCAGAGCAGTGTGCTTGT...GGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR TCA 90 bp | CTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTTCATGGCTGCAGATGTaGGAGTCCACAAGCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: LRSKARLGSLPSLSSRSTSWLQM*ESTSTL Trigger: CAGTGTGCTTGTGGACTCTCACATCTGCAGCCATGA...AGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR TCA 90 bp | CTCCCGTCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATAGGTCTGGGCACATACTaGGGCATAGAGCTCCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LPSLSSRSTPVCGLLRNIGLGTY*GIELRL Trigger: GAGCCGGAGCTCTATGCCTCAGTATGTGCCCAGACC...TATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGACGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR TCA 90 bp | TCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCGGTCTGGGCACATACTaGGGCATAGAGCTCCGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLSSRSTPVCGLLRNIPTGLGTY*GIELRL Trigger: GAGCCGGAGCTCTATGCCTCAGTATGTGCCCAGACC...GGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR GCA 90 bp | CCCGTCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCAGTCCACAAGCACACTaGTCTGAGCCGAGGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PVSKFQVHSSLWTPEEYTSPQAH*SEPRVS Trigger: GCTGACCCTCGGCTCAGAGCAGTGTGCTTGTGGACT...GGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGACGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR GCA 90 bp | ATTCTCCTGCTAGGGTTCTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCCCACTGGGACAAGTGTaGAGCCAGCGAGATGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ILLLGFLGQKPGSGPSRLPLGQV*SQRDEK Trigger: TTTCTCATCTCGCTGGCTGCACACTTGTCCCAGTGG...GAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAGAACCCTAGCAGGAGAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR GCA 90 bp | ATCACATCCTGTGACTTGGCAATGGCGCCCGTCTTTGGGTGCTGGTTGGGAAACCCAAGAGTTGGATCCTaGTGGTCTGGCTCTGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ITSCDLAMAPVFGCWLGNPRVGS*WSGSGS Trigger: AGACCCAGAGCCAGACCAGCAGGATCCAACTCTTGG...GTTTCCCAACCAGCACCCAAAGACGGGCGCCATTGCCAAGTCACAGGATGTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR CCA 90 bp | AAAGAAATAAGGAGGGGGCTACTGTCTTTGCCTCCTCCATCACGAAAGCTTTGCCGGCCCCTGGTCCACTaGGACAAGTGTGCAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KEIRRGLLSLPPPSRKLCRPLVH*DKCAAS Trigger: GCTGGCTGCACACTTGTCCCAGTGGACCAGGGGCCG...GCAAAGCTTTCGTGATGGAGGAGGCAAAGACAGTAGCCCCCTCCTTATTTCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | CTCCCGTCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACTGCTGGTCTGGCTCTaGGTCTTGAGACAGCCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPSLSSRSTPVCGLLRNILLVWL*VLRQPS Trigger: GGACGGCTGTCTCAAGACCCAGAGCCAGACCAGCAG...TATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGACGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR CCA 90 bp | CTCCCGTCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACGAGGCCTGGGACTTTaGCTCAGAGTCCAGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LPSLSSRSTPVCGLLRNIRGLGL*LRVQHH Trigger: GTGGTGCTGGACTCTGAGCCAAAGTCCCAGGCCTCG...TATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGACGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | AAAGAAATAAGGAGGGGGCTACTGTCTTTGCCTCCTCCATCACGAAAGCTTTGCTCGGGGCCCGAGGCCTaGGACTTTGGCTCAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KEIRRGLLSLPPPSRKLCSGPEA*DFGSES Trigger: GGACTCTGAGCCAAAGTCCCAGGCCTCGGGCCCCGA...GCAAAGCTTTCGTGATGGAGGAGGCAAAGACAGTAGCCCCCTCCTTATTTCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | ATCACATCCTGTGACTTGGCAATGGCGCCCGTCTTTGGGTGCTGGTTGGGAAACCCCGTCTTTGGGTGCTaGTTGGGAAACAGTCATGCC | + |
|
Preference number: 4 (lower is better) Translates to: ITSCDLAMAPVFGCWLGNPVFGC*LGNSHA Trigger: GGCATGACTGTTTCCCAACCAGCACCCAAAGACGGG...GTTTCCCAACCAGCACCCAAAGACGGGCGCCATTGCCAAGTCACAGGATGTGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | GCTAGGGTTCTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCGGGGTGGGGAGGATCTaGTTAAACTCCAGAAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ARVLRSKARLGSLPSLSSGVGRI*LNSRRR Trigger: CCTTCTTCTGGAGTTTAACCAGATCCTCCCCACCCC...GGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAGAACCCTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR TCA 90 bp | TCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCGCCTGGTTCATGGCCTaGCGGTTTCCACAGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLSSRSTPVCGLLRNIPTAWFMA*RFPQHF Trigger: GAAGTGCTGTGGAAACCGTCAGGCCATGAACCAGGC...GGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR TCA 90 bp | CTCCCGTCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATAGCCTGGTTCATGGCCTaGCGGTTTCCACAGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: LPSLSSRSTPVCGLLRNIAWFMA*RFPQHF Trigger: GAAGTGCTGTGGAAACCGTCAGGCCATGAACCAGGC...TATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGACGGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR GCA 90 bp | GCTAGGGTTCTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCCCATCACGAAAGCTTTaGCCTGAGATGTCTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ARVLRSKARLGSLPSLSSPSRKL*PEMSPL Trigger: CAAGGGAGACATCTCAGGGCAAAGCTTTCGTGATGG...GGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAGAACCCTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | CCAGAAGAAGGAAGTGAGAACCTGGGAGTTTGGGGGCTAAGAGGAACAGATAGACCCAGGCCTGGGTTATaGAGGGGATTCCCAGTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PEEGSENLGVWGLRGTDRPRPGL*RGFPVR Trigger: TCGCACTGGGAATCCCCTCCATAACCCAGGCCTGGG...TCTATCTGTTCCTCTTAGCCCCCAAACTCCCAGGTTCTCACTTCCTTCTTCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | AAAGAAATAAGGAGGGGGCTACTGTCTTTGCCTCCTCCATCACGAAAGCTTTGCTCCTGCTCCGGCCCCTaGTCCACTGGGACAAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KEIRRGLLSLPPPSRKLCSCSGP*STGTSV Trigger: CACACTTGTCCCAGTGGACCAGGGGCCGGAGCAGGA...GCAAAGCTTTCGTGATGGAGGAGGCAAAGACAGTAGCCCCCTCCTTATTTCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | AAAGAAATAAGGAGGGGGCTACTGTCTTTGCCTCCTCCATCACGAAAGCTTTGCCCTCCTCTGCAGCCCTaGCAGGGCCTCCAAGAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KEIRRGLLSLPPPSRKLCPPLQP*QGLQEL Trigger: CAACTCTTGGAGGCCCTGCCAGGGCTGCAGAGGAGG...GCAAAGCTTTCGTGATGGAGGAGGCAAAGACAGTAGCCCCCTCCTTATTTCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | ATCACATCCTGTGACTTGGCAATGGCGCCCGTCTTTGGGTGCTGGTTGGGAAACTCTTTGGGTGCTGGTTaGGAAACAGTCATGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ITSCDLAMAPVFGCWLGNSLGAG*ETVMPL Trigger: CAGGGGCATGACTGTTTCCCAACCAGCACCCAAAGA...GTTTCCCAACCAGCACCCAAAGACGGGCGCCATTGCCAAGTCACAGGATGTGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | TCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCCCTGTGACTTGGCAATaGCGCCCGTCTTTGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSSRSTPVCGLLRNIPTPVTWQ*RPSLGA Trigger: AGCACCCAAAGACGGGCGCCATTGCCAAGTCACAGG...GGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | AGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCCACCCATCACATCCTGTGACTTaGCAATGGCGCCCGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSRSTPVCGLLRNIPTHPSHPVT*QWRPSL Trigger: CAAAGACGGGCGCCATTGCCAAGTCACAGGATGTGA...TGGGTGGGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | CTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTGAGAACCTGGGAGTTTaGGGGCTAAGAGGAACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LRSKARLGSLPSLSSRSTENLGV*GLRGTD Trigger: ATCTGTTCCTCTTAGCCCCCAAACTCCCAGGTTCTC...AGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | ATTCTCCTGCTAGGGTTCTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCGTCCACTCCAGTCTGTaGACTCCTGAGGAATATACC | + |
|
Preference number: 4 (lower is better) Translates to: ILLLGFLGQKPGSGPSRLVHSSL*TPEEYT Trigger: GGTATATTCCTCAGGAGTCCACAGACTGGAGTGGAC...GAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAGAACCCTAGCAGGAGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR TCA 90 bp | CTCCCGTCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATAGTGCAGCCAGCGAGATaGGAAATAGCAGCGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LPSLSSRSTPVCGLLRNIVQPAR*EIAASQ Trigger: CTGTGACGCTGCTATTTCTCATCTCGCTGGCTGCAC...TATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGACGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR GCA 90 bp | TCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCGGGGGCTACTGTCTTTaGCTCCTCCATCACGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSSRSTPVCGLLRNIPTGGYCL*LLHHES Trigger: GCTTTCGTGATGGAGGAGGCAAAGACAGTAGCCCCC...GGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | AAAGAAATAAGGAGGGGGCTACTGTCTTTGCCTCCTCCATCACGAAAGCTTTGCCACAGTCCCCAGGCCTaGGTTATGGAGGGGATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KEIRRGLLSLPPPSRKLCHSPQA*VMEGIP Trigger: GGGAATCCCCTCCATAACCCAGGCCTGGGGACTGTG...GCAAAGCTTTCGTGATGGAGGAGGCAAAGACAGTAGCCCCCTCCTTATTTCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | TCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCAATGGCGCCCGTCTTTaGGTGCTGGTTGGGAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSSRSTPVCGLLRNIPTNGARL*VLVGKQ Trigger: CTGTTTCCCAACCAGCACCCAAAGACGGGCGCCATT...GGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | CTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTAGTTTAGGGGATGAGTaGGGACTTCTCGGTAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRSKARLGSLPSLSSRSTSLGDE*GLLGKR Trigger: TCTCTTACCGAGAAGTCCCCACTCATCCCCTAAACT...AGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618781.1 |
||
| CDS-3UTR TCA 90 bp | CCAGAAGAAGGAAGTGAGAACCTGGGAGTTTGGGGGCTAAGAGGAACAGATAGAGTGCAGCCAGCGAGATaGGAAATAGCAGCGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PEEGSENLGVWGLRGTDRVQPAR*EIAASQ Trigger: CTGTGACGCTGCTATTTCTCATCTCGCTGGCTGCAC...TCTATCTGTTCCTCTTAGCCCCCAAACTCCCAGGTTCTCACTTCCTTCTTCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR TCA 90 bp | AAAGAAATAAGGAGGGGGCTACTGTCTTTGCCTCCTCCATCACGAAAGCTTTGCTGCCTGAGGAGACACTaGGGCGTGGGGGTAGACTAT | + |
|
Preference number: 4 (lower is better) Translates to: KEIRRGLLSLPPPSRKLCCLRRH*GVGVDY Trigger: ATAGTCTACCCCCACGCCTCAGTGTCTCCTCAGGCA...GCAAAGCTTTCGTGATGGAGGAGGCAAAGACAGTAGCCCCCTCCTTATTTCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR GCA 90 bp | CCAGAAGAAGGAAGTGAGAACCTGGGAGTTTGGGGGCTAAGAGGAACAGATAGAGGGGGCTACTGTCTTTaGCTCCTCCATCACGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PEEGSENLGVWGLRGTDRGGYCL*LLHHES Trigger: GCTTTCGTGATGGAGGAGGCAAAGACAGTAGCCCCC...TCTATCTGTTCCTCTTAGCCCCCAAACTCCCAGGTTCTCACTTCCTTCTTCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR GCA 90 bp | CCCGTCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACAGACTCTCCAGATaGAACGCAGAGTTTAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PVSKFQVHSSLWTPEEYTHRLSR*NAEFRG Trigger: TCCCCTAAACTCTGCGTTGCATCTGGAGAGTCTGTG...GGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGACGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | AAAGAAATAAGGAGGGGGCTACTGTCTTTGCCTCCTCCATCACGAAAGCTTTGCAGGGCCTCCAAGAGTTaGATCCTGCTGGTCTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KEIRRGLLSLPPPSRKLCRASKS*ILLVWL Trigger: GAGCCAGACCAGCAGGATCCAACTCTTGGAGGCCCT...GCAAAGCTTTCGTGATGGAGGAGGCAAAGACAGTAGCCCCCTCCTTATTTCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | CTCCCGTCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATATCTTTGGGTGCTGGTTaGGAAACAGTCATGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LPSLSSRSTPVCGLLRNISLGAG*ETVMPL Trigger: CAGGGGCATGACTGTTTCCCAACCAGCACCCAAAGA...TATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGACGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | CTCCCGTCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATATCACATCCTGTGACTTaGCAATGGCGCCCGTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPSLSSRSTPVCGLLRNISHPVT*QWRPSL Trigger: CAAAGACGGGCGCCATTGCCAAGTCACAGGATGTGA...TATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGACGGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | ATCACATCCTGTGACTTGGCAATGGCGCCCGTCTTTGGGTGCTGGTTGGGAAACACAGAGACAGCAGGATaGAGACTGTATTCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ITSCDLAMAPVFGCWLGNTETAG*RLYSPA Trigger: AGCAGGAGAATACAGTCTCCATCCTGCTGTCTCTGT...GTTTCCCAACCAGCACCCAAAGACGGGCGCCATTGCCAAGTCACAGGATGTGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR GCA 90 bp | AAAGAAATAAGGAGGGGGCTACTGTCTTTGCCTCCTCCATCACGAAAGCTTTGCGTGCGAGTAGATCCGTaGAGTTGTCGCCTCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KEIRRGLLSLPPPSRKLCVRVDP*SCRLCS Trigger: TGAGCAGAGGCGACAACTGCACGGATCTACTCGCAC...GCAAAGCTTTCGTGATGGAGGAGGCAAAGACAGTAGCCCCCTCCTTATTTCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | TCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCGAGAACCTGGGAGTTTaGGGGCTAAGAGGAACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLSSRSTPVCGLLRNIPTENLGV*GLRGTD Trigger: ATCTGTTCCTCTTAGCCCCCAAACTCCCAGGTTCTC...GGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR TCA 90 bp | CCAGAAGAAGGAAGTGAGAACCTGGGAGTTTGGGGGCTAAGAGGAACAGATAGACTGAGATGTCTCCCTTaGAGCTCAGATAGGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PEEGSENLGVWGLRGTDRLRCLP*SSDRKS Trigger: GGACTTCCTATCTGAGCTTCAAGGGAGACATCTCAG...TCTATCTGTTCCTCTTAGCCCCCAAACTCCCAGGTTCTCACTTCCTTCTTCTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CCA 90 bp | TCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCACAGAGACAGCAGGATaGAGACTGTATTCTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSSRSTPVCGLLRNIPTTETAG*RLYSPA Trigger: AGCAGGAGAATACAGTCTCCATCCTGCTGTCTCTGT...GGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS TCA 90 bp | CTGATCCGGGAAGGAGGCCCGGGCCCTGCGGGTCTGGGCACATACTaGGGCATAGAGCTCCGGCTCGGGGCCCGAGGCCTGGGACTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LIREGGPGPAGLGTY*GIELRLGARGLGLW Trigger: CCAAAGTCCCAGGCCTCGGGCCCCGAGCCGGAGCTCTATGCCTCAGTATGTGCCCAGACCCGCAGGGCCCGGGCCTCCTTCCCGGATCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000259608.8 ENST00000474403.1 ENST00000486859.5 ENST00000618781.1 |
||
| CDS GCA 90 bp | CCTCTTCCACAGACTCTCCAGAGCGTCCCTGCCCCGGATGGCTCCTaGTCCGGCCCCTGGTCCACTGGGACAAGTGTGCAGCCAGCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PLPQTLQSVPAPDGS*SGPWSTGTSVQPAR Trigger: TCTCGCTGGCTGCACACTTGTCCCAGTGGACCAGGGGCCGGAGCAGGAGCCATCCGGGGCAGGGACGCTCTGGAGAGTCTGTGGAAGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000259608.8 |
||
| CDS GCA 90 bp | CATCCCTGTTGTCCTTCACCCACCGTCCCTGCCCCGGATGGCTCCTaGTCCGGCCCCTGGTCCACTGGGACAAGTGTGCAGCCAGCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: HPCCPSPTVPAPDGS*SGPWSTGTSVQPAR Trigger: TCTCGCTGGCTGCACACTTGTCCCAGTGGACCAGGGGCCGGAGCAGGAGCCATCCGGGGCAGGGACGGTGGGTGAAGGACAACAGGGATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618781.1 |
||
| CDS CCA 90 bp | GAGCGTCCCTGCCCCGGATGGCTCCTGCTCCGGCCCCTGGTCCACTaGGACAAGTGTGCAGCCAGCGAGATGAGAAATAGCAGCGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: ERPCPGWLLLRPLVH*DKCAASEMRNSSVT Trigger: TGTGACGCTGCTATTTCTCATCTCGCTGGCTGCACACTTGTCCCAGTGGACCAGGGGCCGGAGCAGGAGCCATCCGGGGCAGGGACGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000259608.8 |
||
| CDS CCA 90 bp | CACCGTCCCTGCCCCGGATGGCTCCTGCTCCGGCCCCTGGTCCACTaGGACAAGTGTGCAGCCAGCGAGATGAGAAATAGCAGCGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: HRPCPGWLLLRPLVH*DKCAASEMRNSSVT Trigger: TGTGACGCTGCTATTTCTCATCTCGCTGGCTGCACACTTGTCCCAGTGGACCAGGGGCCGGAGCAGGAGCCATCCGGGGCAGGGACGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618781.1 |
||
| CDS-3UTR CAA 90 bp | GCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACCGAGGCCTGGGACTTaGGCTCAGAGTCCAGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: ARLGSLPSLSSRSTPVCGPRPGT*AQSPAP Trigger: TGGTGCTGGACTCTGAGCCAAAGTCCCAGGCCTCGG...TCCACAGACTGGAGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS TCA 90 bp | TGCTCCGGCCCCTGGTCCACTGGGACAAGTGTGCAGCCAGCGAGATaGGAAATAGCAGCGTCACAGCCCCTAAGAGGACCCACAGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: CSGPWSTGTSVQPAR*EIAASQPLRGPTVP Trigger: GGGGACTGTGGGTCCTCTTAGGGGCTGTGACGCTGCTATTTCTCATCTCGCTGGCTGCACACTTGTCCCAGTGGACCAGGGGCCGGAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS TCA 90 bp | CACAAGCACACTGCTCTGAGCCGAGGGTCAGCCTGGTTCATGGCCTaGCGGTTTCCACAGCACTTCTTACTCCCATCCCTCCTCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HKHTALSRGSAWFMA*RFPQHFLLPSLLRP Trigger: GGGCCTGAGGAGGGATGGGAGTAAGAAGTGCTGTGGAAACCGTCAGGCCATGAACCAGGCTGACCCTCGGCTCAGAGCAGTGTGCTTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000259608.8 ENST00000474403.1 ENST00000618781.1 |
||
| CDS-3UTR CAA 90 bp | GCTAGGGTTCTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCACCACCTCCGAGTACTaGACGGGGGTTCCAGGACCG | + |
|
Preference number: 5 (lower is better) Translates to: ARVLRSKARLGSLPSLSSTTSEY*TGVPGP Trigger: CGGTCCTGGAACCCCCGTCAAGTACTCGGAGGTGGT...GGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAGAACCCTAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CAA 90 bp | ATTCTCCTGCTAGGGTTCTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCGTCTGGCTCTGGGTCTaGAGACAGCCGTCCTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ILLLGFLGQKPGSGPSRLVWLWV*RQPSCL Trigger: CAGACAGGACGGCTGTCTCAAGACCCAGAGCCAGAC...GAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAGAACCCTAGCAGGAGAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CAA 90 bp | CTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTCAGGGCCTCCAAGAGTaGGATCCTGCTGGTCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRSKARLGSLPSLSSRSTQGLQE*DPAGLA Trigger: AGCCAGACCAGCAGGATCCAACTCTTGGAGGCCCTG...AGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CAA 90 bp | AGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCCACCCACCGAGGCCTGGGACTTaGGCTCAGAGTCCAGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SSRSTPVCGLLRNIPTHPPRPGT*AQSPAP Trigger: TGGTGCTGGACTCTGAGCCAAAGTCCCAGGCCTCGG...TGGGTGGGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CAA 90 bp | GCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGTCTTTGGGTGCTGGTaGGGAAACAGTCATGCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: ARVPPVSKFQVHSSLWTPVFGCW*GNSHAP Trigger: AGGGGCATGACTGTTTCCCAACCAGCACCCAAAGAC...AGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CAA 90 bp | CTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCAGGTCCACTGTCAACCCATCCCTGTaGTCCTTCACCCACCGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LRSKARLGSLPSLSSRSTVNPSL*SFTHRP Trigger: GGGACGGTGGGTGAAGGACAACAGGGATGGGTTGAC...AGTGGACCTGGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618781.1 |
||
| CDS-3UTR CAA 90 bp | ATTCTCCTGCTAGGGTTCTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCAGTAGATCCGTGCAGTaGTCGCCTCTGCTCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ILLLGFLGQKPGSGPSRLSRSVQ*SPLLMA Trigger: AGCCATGAGCAGAGGCGACAACTGCACGGATCTACT...GAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAGAACCCTAGCAGGAGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CAA 90 bp | TCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCACCACCTCCGAGTACTaGACGGGGGTTCCAGGACCG | + |
|
Preference number: 5 (lower is better) Translates to: SLSSRSTPVCGLLRNIPTTTSEY*TGVPGP Trigger: CGGTCCTGGAACCCCCGTCAAGTACTCGGAGGTGGT...GGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CAA 90 bp | ATCACATCCTGTGACTTGGCAATGGCGCCCGTCTTTGGGTGCTGGTTGGGAAACAGTAGATCCGTGCAGTaGTCGCCTCTGCTCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ITSCDLAMAPVFGCWLGNSRSVQ*SPLLMA Trigger: AGCCATGAGCAGAGGCGACAACTGCACGGATCTACT...GTTTCCCAACCAGCACCCAAAGACGGGCGCCATTGCCAAGTCACAGGATGTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CAA 90 bp | GCTAGGGTTCTTAGGTCAAAAGCCAGGCTCGGGTCCCTCCCGTCTCTAAGTTCCATCACATCCTGTGACTaGGCAATGGCGCCCGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: ARVLRSKARLGSLPSLSSITSCD*AMAPVF Trigger: AAAGACGGGCGCCATTGCCAAGTCACAGGATGTGAT...GGAACTTAGAGACGGGAGGGACCCGAGCCTGGCTTTTGACCTAAGAACCCTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CAA 90 bp | AGATCACATCCTGTGACTTGGCAATGGCGCCCGTCTTTGGGTGCTGGTTGGGAAAGGGGGCTACTGTCTTaGCCTCCTCCATCACGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RSHPVTWQWRPSLGAGWERGLLS*PPPSRK Trigger: CTTTCGTGATGGAGGAGGCAAAGACAGTAGCCCCCT...TTCCCAACCAGCACCCAAAGACGGGCGCCATTGCCAAGTCACAGGATGTGATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CAA 90 bp | CCAGAAGAAGGAAGTGAGAACCTGGGAGTTTGGGGGCTAAGAGGAACAGATAGAGTCTGGCTCTGGGTCTaGAGACAGCCGTCCTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PEEGSENLGVWGLRGTDRVWLWV*RQPSCL Trigger: CAGACAGGACGGCTGTCTCAAGACCCAGAGCCAGAC...TCTATCTGTTCCTCTTAGCCCCCAAACTCCCAGGTTCTCACTTCCTTCTTCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CAA 90 bp | AGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCCACCCAATCACATCCTGTGACTaGGCAATGGCGCCCGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSRSTPVCGLLRNIPTHPITSCD*AMAPVF Trigger: AAAGACGGGCGCCATTGCCAAGTCACAGGATGTGAT...TGGGTGGGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS-3UTR CAA 90 bp | TCTCTAAGTTCCAGGTCCACTCCAGTCTGTGGACTCCTGAGGAATATACCCACCAGGGGGCTACTGTCTTaGCCTCCTCCATCACGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLSSRSTPVCGLLRNIPTRGLLS*PPPSRK Trigger: CTTTCGTGATGGAGGAGGCAAAGACAGTAGCCCCCT...GGTGGGTATATTCCTCAGGAGTCCACAGACTGGAGTGGACCTGGAACTTAGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
||
| CDS CCA 90 bp | TCTTCCACAGACTCTCCAGATGCAACGCAGAGTTTAGGGGATGAGTaGGGACTTCTCGGTAAGAGAGAACTCTCAGTCAACCCATCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSTDSPDATQSLGDE*GLLGKRELSVNPSL Trigger: CAGGGATGGGTTGACTGAGAGTTCTCTCTTACCGAGAAGTCCCCACTCATCCCCTAAACTCTGCGTTGCATCTGGAGAGTCTGTGGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618781.1 |
||
| CDS-3UTR CAA 90 bp | CCAGAAGAAGGAAGTGAGAACCTGGGAGTTTGGGGGCTAAGAGGAACAGATAGAGTCTTTGGGTGCTGGTaGGGAAACAGTCATGCCCCT | + |
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Preference number: 5 (lower is better) Translates to: PEEGSENLGVWGLRGTDRVFGCW*GNSHAP Trigger: AGGGGCATGACTGTTTCCCAACCAGCACCCAAAGAC...TCTATCTGTTCCTCTTAGCCCCCAAACTCCCAGGTTCTCACTTCCTTCTTCTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS-3UTR CAA 90 bp | AAAGAAATAAGGAGGGGGCTACTGTCTTTGCCTCCTCCATCACGAAAGCTTTGCCAATGGCGCCCGTCTTaGGGTGCTGGTTGGGAAACA | + |
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Preference number: 5 (lower is better) Translates to: KEIRRGLLSLPPPSRKLCQWRPS*GAGWET Trigger: TGTTTCCCAACCAGCACCCAAAGACGGGCGCCATTG...GCAAAGCTTTCGTGATGGAGGAGGCAAAGACAGTAGCCCCCTCCTTATTTCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS TCA 72 bp | GAAGGAGGCCCGGGCCCTGCGGGTCTGGGCACATACTaGGGCATAGAGCTCCGGCTCGGGGCCCGAGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: EGGPGPAGLGTY*GIELRLGARGL Trigger: CAGGCCTCGGGCCCCGAGCCGGAGCTCTATGCCTCAGTATGTGCCCAGACCCGCAGGGCCCGGGCCTCCTTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000259608.8 ENST00000474403.1 ENST00000486859.5 ENST00000618781.1 |
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| CDS CCA 72 bp | CAGGCCCTCCATCTCAGCTGGCTGCAGGCTGGCTGTTaGCATAGGCCTGATCCGGGAAGGAGGCCCGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: QALHLSWLQAGC*HRPDPGRRPGP Trigger: GGGCCCGGGCCTCCTTCCCGGATCAGGCCTATGCCAACAGCCAGCCTGCAGCCAGCTGAGATGGAGGGCCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000259608.8 ENST00000474403.1 ENST00000486859.5 ENST00000618781.1 |
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| CDS GCA 72 bp | CAGACTCTCCAGAGCGTCCCTGCCCCGGATGGCTCCTaGTCCGGCCCCTGGTCCACTGGGACAAGTGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: QTLQSVPAPDGS*SGPWSTGTSVQ Trigger: CTGCACACTTGTCCCAGTGGACCAGGGGCCGGAGCAGGAGCCATCCGGGGCAGGGACGCTCTGGAGAGTCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000259608.8 |
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| CDS GCA 72 bp | TGTCCTTCACCCACCGTCCCTGCCCCGGATGGCTCCTaGTCCGGCCCCTGGTCCACTGGGACAAGTGTGCAG | + |
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Preference number: 6 (lower is better) Translates to: CPSPTVPAPDGS*SGPWSTGTSVQ Trigger: CTGCACACTTGTCCCAGTGGACCAGGGGCCGGAGCAGGAGCCATCCGGGGCAGGGACGGTGGGTGAAGGACA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618781.1 |
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| CDS CCA 72 bp | TGCCCCGGATGGCTCCTGCTCCGGCCCCTGGTCCACTaGGACAAGTGTGCAGCCAGCGAGATGAGAAATAGC | + |
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Preference number: 6 (lower is better) Translates to: CPGWLLLRPLVH*DKCAASEMRNS Trigger: GCTATTTCTCATCTCGCTGGCTGCACACTTGTCCCAGTGGACCAGGGGCCGGAGCAGGAGCCATCCGGGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS CCA 72 bp | ATAGAGCTCCGGCTCGGGGCCCGAGGCCTGGGACTTTaGCTCAGAGTCCAGCACCACCTCCGAGTACTTGAC | + |
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Preference number: 6 (lower is better) Translates to: IELRLGARGLGL*LRVQHHLRVLD Trigger: GTCAAGTACTCGGAGGTGGTGCTGGACTCTGAGCCAAAGTCCCAGGCCTCGGGCCCCGAGCCGGAGCTCTAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000259608.8 ENST00000474403.1 ENST00000486859.5 ENST00000618781.1 |
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| CDS CAA 90 bp | TGGGGACTTCTCGGTAAGAGAGAACTCTCAGTCAACCCATCCCTGTaGTCCTTCACCCACCGTCCCTGCCCCGGATGGCTCCTGCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: WGLLGKRELSVNPSL*SFTHRPCPGWLLLR Trigger: CCGGAGCAGGAGCCATCCGGGGCAGGGACGGTGGGTGAAGGACAACAGGGATGGGTTGACTGAGAGTTCTCTCTTACCGAGAAGTCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000618781.1 |
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| CDS CAA 72 bp | TCACCTCCTCTGCAGCCCTGGCAGGGCCTCCAAGAGTaGGATCCTGCTGGTCTGGCTCTGGGTCTTGAGACA | + |
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Preference number: 6 (lower is better) Translates to: SPPLQPWQGLQE*DPAGLALGLET Trigger: TGTCTCAAGACCCAGAGCCAGACCAGCAGGATCCAACTCTTGGAGGCCCTGCCAGGGCTGCAGAGGAGGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000259608.8 ENST00000474403.1 ENST00000486859.5 ENST00000618781.1 |
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| CDS CAA 90 bp | GCCTGGGTTATGGAGGGGATTCCCAGTGCGAGTAGATCCGTGCAGTaGTCGCCTCTGCTCATGGCTGCAGATGTGAGAGTCCACAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: AWVMEGIPSASRSVQ*SPLLMAADVRVHKH Trigger: GTGCTTGTGGACTCTCACATCTGCAGCCATGAGCAGAGGCGACAACTGCACGGATCTACTCGCACTGGGAATCCCCTCCATAACCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS TCA 72 bp | ACTGCTCTGAGCCGAGGGTCAGCCTGGTTCATGGCCTaGCGGTTTCCACAGCACTTCTTACTCCCATCCCTC | + |
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Preference number: 6 (lower is better) Translates to: TALSRGSAWFMA*RFPQHFLLPSL Trigger: GAGGGATGGGAGTAAGAAGTGCTGTGGAAACCGTCAGGCCATGAACCAGGCTGACCCTCGGCTCAGAGCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000259608.8 ENST00000474403.1 ENST00000618781.1 |
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| CDS CAA 90 bp | CTCTTCCACAGACTCTCCAGAGCCAGTGCGAGTAGATCCGTGCAGTaGTCGCCTCTGCTCATGGCTGCAGATGTGAGAGTCCACAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: LFHRLSRASASRSVQ*SPLLMAADVRVHKH Trigger: GTGCTTGTGGACTCTCACATCTGCAGCCATGAGCAGAGGCGACAACTGCACGGATCTACTCGCACTGGCTCTGGAGAGTCTGTGGAAGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474403.1 |
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| CDS CAA 72 bp | ATGGAGGGGATTCCCAGTGCGAGTAGATCCGTGCAGTaGTCGCCTCTGCTCATGGCTGCAGATGTGAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: MEGIPSASRSVQ*SPLLMAADVRV Trigger: GACTCTCACATCTGCAGCCATGAGCAGAGGCGACAACTGCACGGATCTACTCGCACTGGGAATCCCCTCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000259608.8 ENST00000618781.1 |
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| CDS CAA 72 bp | AGACTCTCCAGAGCCAGTGCGAGTAGATCCGTGCAGTaGTCGCCTCTGCTCATGGCTGCAGATGTGAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: RLSRASASRSVQ*SPLLMAADVRV Trigger: GACTCTCACATCTGCAGCCATGAGCAGAGGCGACAACTGCACGGATCTACTCGCACTGGCTCTGGAGAGTCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000474403.1 |
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| CDS CCA 72 bp | GACTCTCCAGATGCAACGCAGAGTTTAGGGGATGAGTaGGGACTTCTCGGTAAGAGAGAACTCTCAGTCAAC | + |
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Preference number: 6 (lower is better) Translates to: DSPDATQSLGDE*GLLGKRELSVN Trigger: GTTGACTGAGAGTTCTCTCTTACCGAGAAGTCCCCACTCATCCCCTAAACTCTGCGTTGCATCTGGAGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000618781.1 |
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