Pregenerated sensors for SIRPD (Homo sapiens)
Ensembl gene IDs: ENSG00000125900Ensembl transcript IDs: ENST00000381621.5, ENST00000381623.4, ENST00000429387.5
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR-3UTR CAA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTAGAGTATGGGGGCTTTaGTTATTTACTTGTACGTTC | + |
Preference number: 3 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSRVWGL*LFTCTF Trigger: GAACGTACAAGTAAATAACAAAAGCCCCCATACTCT...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000381621.5 ENST00000381623.4 ENST00000429387.5 |
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3UTR-3UTR CAA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTGCTTTTGTTATTTACTaGTACGTTCCTTCCCTGTTT | + |
Preference number: 3 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSAFVIY*YVPSLF Trigger: AAACAGGGAAGGAACGTACAAGTAAATAACAAAAGC...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000381621.5 ENST00000381623.4 ENST00000429387.5 |
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CDS-3UTR TCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTTTGACAGCAAGCCTGTaGGTCCCAGCAGCCGGAGGC | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSLTASL*VPAAGG Trigger: GCCTCCGGCTGCTGGGACTCACAGGCTTGCTGTCAA...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381621.5 ENST00000381623.4 ENST00000429387.5 |
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CDS-3UTR CCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTGCCGAGAGGCAGGTATaGGCATCATGGTGGGCCCTG | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSAERQV*ASWWAL Trigger: CAGGGCCCACCATGATGCCCATACCTGCCTCTCGGC...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381621.5 ENST00000381623.4 ENST00000429387.5 |
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CDS-3UTR GCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTCCCTGGAGCCTGCTCTaGCTGCAGGTCTGTTCTTGG | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSPWSLL*LQVCSW Trigger: CCAAGAACAGACCTGCAGGCAGAGCAGGCTCCAGGG...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381621.5 ENST00000381623.4 ENST00000429387.5 |
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CDS-3UTR CCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTGTATGGGCATCATGGTaGGCCCTGGAGCCTGCTCTG | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSVWASW*ALEPAL Trigger: CAGAGCAGGCTCCAGGGCCCACCATGATGCCCATAC...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381621.5 ENST00000381623.4 ENST00000429387.5 |
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CDS-3UTR CCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTCAGGTATGGGCATCATaGTGGGCCCTGGAGCCTGCT | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSQVWAS*WALEPA Trigger: AGCAGGCTCCAGGGCCCACCATGATGCCCATACCTG...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381621.5 ENST00000381623.4 ENST00000429387.5 |
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CDS-3UTR TCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTGGAGCTTGCTCTGCCTaGATGCCTGTCCTGGAGATG | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSGACSA*MPVLEM Trigger: CATCTCCAGGACAGGCATTCAGGCAGAGCAAGCTCC...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS-3UTR TCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTGGATGGGCATTGTGGTaGAACCTGGAGCTTGCTCTG | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSGWALW*NLELAL Trigger: CAGAGCAAGCTCCAGGTTTCACCACAATGCCCATCC...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS-3UTR TCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTCTGAGTGCCCCGACCTaGTTGGTACTCCTTGATAGC | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSLSAPT*LVLLDS Trigger: GCTATCAAGGAGTACCAATCAGGTCGGGGCACTCAG...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS-3UTR TCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTGCAGTAACAAACACCTaGGTGCCCCGACCTGATTGG | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSAVTNT*VPRPDW Trigger: CCAATCAGGTCGGGGCACTCAGGTGTTTGTTACTGC...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381621.5 |
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CDS-3UTR GCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTACCTGGAGCTTGCTCTaGCTGAATGCCTGTCCTGGA | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSTWSLL*LNACPG Trigger: TCCAGGACAGGCATTCAGGCAGAGCAAGCTCCAGGT...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS-3UTR TCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTTTGGCCCTGTTCCCTTaGACCACAAGACAGGTCCAT | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSLALFP*TTRQVH Trigger: ATGGACCTGTCTTGTGGTTCAAGGGAACAGGGCCAA...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381621.5 ENST00000381623.4 ENST00000429387.5 |
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CDS-3UTR TCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTTCAGTAACAAACACCTaGGTGCCCCGACCTGATTGG | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSSVTNT*VPRPDW Trigger: CCAATCAGGTCGGGGCACTCAGGTGTTTGTTACTGA...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381623.4 |
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CDS-3UTR TCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTCATGGAACACATGTGTaGCTCCTGCCAGTTCAAGCA | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSHGTHV*LLPVQA Trigger: TGCTTGAACTGGCAGGAGTCACACATGTGTTCCATG...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS-3UTR GCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTTGGAAAAGTCTGTGTTaGCAGGCTTGGTGGTGTCTC | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSWKSLC*QAWWCL Trigger: GAGACACCACCAAGCCTGGCAACACAGACTTTTCCA...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS-3UTR CCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTCTGTGTTGCCAGGCTTaGTGGTGTCTCCAATCTCTT | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSLCCQA*WCLQSL Trigger: AAGAGATTGGAGACACCACCAAGCCTGGCAACACAG...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS-3UTR CCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTTTTCACGGATGCGGGTaGAAAAGTCTGTGTTGCCAG | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSFHGCG*KSLCCQ Trigger: CTGGCAACACAGACTTTTCCACCCGCATCCGTGAAA...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS-3UTR CCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTGTGCCCCGACCTGATTaGTACTCCTTGATAGCTCTT | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSVPRPD*YSLIAL Trigger: AAGAGCTATCAAGGAGTACCAATCAGGTCGGGGCAC...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS-3UTR TCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTCGCTGCAACTCAAGATaGTTGACTCCCCAGTTGATA | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSRCNSR*LTPQLI Trigger: TATCAACTGGGGAGTCAATCATCTTGAGTTGCAGCG...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS-3UTR GCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTGAGAGATTTCACGGATaGGGGTGGAAAAGTCTGTGT | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSERFHG*GWKSLC Trigger: ACACAGACTTTTCCACCCGCATCCGTGAAATCTCTC...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS-3UTR GCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTGGACGAAATAGTTTGTaGTGTTTCTCTCAGGCAGGG | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSGRNSL*CFSQAG Trigger: CCCTGCCTGAGAGAAACAGCACAAACTATTTCGTCC...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381621.5 ENST00000381623.4 ENST00000429387.5 |
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CDS-3UTR CCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTCATTGTGGTGAAACCTaGAGCTTGCTCTGCCTGAAT | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSHCGET*SLLCLN Trigger: ATTCAGGCAGAGCAAGCTCCAGGTTTCACCACAATG...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS-3UTR CCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTGTTCTTGGGAGGTCTTaGATTCTGCTCTGCAGTAAC | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSVLGRS*ILLCSN Trigger: GTTACTGCAGAGCAGAATCCAAGACCTCCCAAGAAC...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381621.5 |
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CDS-3UTR TCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTCTGTTTGGATTATTTTaGCAGCAAGCCTGTGAGTCC | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSLFGLF*QQACES Trigger: GGACTCACAGGCTTGCTGTCAAAATAATCCAAACAG...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000381621.5 ENST00000381623.4 ENST00000429387.5 |
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CDS-3UTR GCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTGACATCTCCGTTTGTTaGACATGGAACACATGTGTG | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSDISVC*TWNTCV Trigger: CACACATGTGTTCCATGTGCAACAAACGGAGATGTC...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS-3UTR CCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTTGTTGCCAGGCTTGGTaGTGTCTCCAATCTCTTTTA | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSCCQAW*CLQSLL Trigger: TAAAAGAGATTGGAGACACCACCAAGCCTGGCAACA...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS-3UTR GCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTTCTTGGATTCTGCTCTaGAGTAACAAACACCTGAGT | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSSWILL*SNKHLS Trigger: ACTCAGGTGTTTGTTACTGCAGAGCAGAATCCAAGA...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381621.5 |
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CDS-3UTR CCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTCATTTGGTAAGGTATTaGGTACGCTGCAACTCAAGA | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSHLVRY*VRCNSR Trigger: TCTTGAGTTGCAGCGTACCCAATACCTTACCAAATG...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS-3UTR CCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTGTTCTTGGGAGGTCTTaGATTCTGCTCTTGTTTGAA | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSVLGRS*ILLLFE Trigger: TTCAAACAAGAGCAGAATCCAAGACCTCCCAAGAAC...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429387.5 |
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CDS-3UTR CCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTGGCATTTTATGTCAGTaGAAGAAAGCTCTCTTGAAG | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSGILCQ*KKALLK Trigger: CTTCAAGAGAGCTTTCTTCCACTGACATAAAATGCC...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000381621.5 ENST00000381623.4 ENST00000429387.5 |
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CDS-3UTR CCA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTATTGTACGATCAAGCTaGCATTTTATGTCAGTGGAA | + |
Preference number: 4 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSIVRSS*HFMSVE Trigger: TTCCACTGACATAAAATGCCAGCTTGATCGTACAAT...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000381621.5 ENST00000381623.4 ENST00000429387.5 |
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CDS GCA 90 bp | GTCCCAGCAGCCGGAGGCAGCAGCAGGGTTGGACGAAATAGTTTGTaGTGTTTCTCTCAGGCAGGGCCGAGAGGCAGGTATGGGCATCAT | + |
Preference number: 5 (lower is better) Translates to: VPAAGGSSRVGRNSL*CFSQAGPRGRYGHH Trigger: ATGATGCCCATACCTGCCTCTCGGCCCTGCCTGAGAGAAACAGCACAAACTATTTCGTCCAACCCTGCTGCTGCCTCCGGCTGCTGGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381621.5 ENST00000381623.4 ENST00000429387.5 |
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CDS GCA 90 bp | CATCAGCAAGAGAGATTTCACGGATGCGGGTGGAAAAGTCTGTGTTaGCAGGCTTGGTGGTGTCTCCAATCTCTTTTACTCTGGGAAAGT | + |
Preference number: 5 (lower is better) Translates to: HQQERFHGCGWKSLC*QAWWCLQSLLLWES Trigger: ACTTTCCCAGAGTAAAAGAGATTGGAGACACCACCAAGCCTGGCAACACAGACTTTTCCACCCGCATCCGTGAAATCTCTCTTGCTGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS GCA 90 bp | ATGATTGACTCCCCAGTTGATACAGTCTGTGACATCTCCGTTTGTTaGACATGGAACACATGTGTGACTCCTGCCAGTTCAAGCAGCAGA | + |
Preference number: 5 (lower is better) Translates to: MIDSPVDTVCDISVC*TWNTCVTPASSSSR Trigger: TCTGCTGCTTGAACTGGCAGGAGTCACACATGTGTTCCATGTGCAACAAACGGAGATGTCACAGACTGTATCAACTGGGGAGTCAATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS CCA 90 bp | GAGAGATTTCACGGATGCGGGTGGAAAAGTCTGTGTTGCCAGGCTTaGTGGTGTCTCCAATCTCTTTTACTCTGGGAAAGTTACCTTGTT | + |
Preference number: 5 (lower is better) Translates to: ERFHGCGWKSLCCQA*WCLQSLLLWESYLV Trigger: AACAAGGTAACTTTCCCAGAGTAAAAGAGATTGGAGACACCACCAAGCCTGGCAACACAGACTTTTCCACCCGCATCCGTGAAATCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS TCA 90 bp | AGGTCTTGGATTCTGCTCAGTAACAAACACCTGAGTGCCCCGACCTaGTTGGTACTCCTTGATAGCTCTTCCTTTTATGAACTTCACGCA | + |
Preference number: 5 (lower is better) Translates to: RSWILLSNKHLSAPT*LVLLDSSSFYELHA Trigger: TGCGTGAAGTTCATAAAAGGAAGAGCTATCAAGGAGTACCAATCAGGTCGGGGCACTCAGGTGTTTGTTACTGAGCAGAATCCAAGACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381623.4 |
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CDS TCA 90 bp | TCTTGGATTCTGCTCTGCAGTAACAAACACCTGAGTGCCCCGACCTaGTTGGTACTCCTTGATAGCTCTTCCTTTTATGAACTTCACGCA | + |
Preference number: 5 (lower is better) Translates to: SWILLCSNKHLSAPT*LVLLDSSSFYELHA Trigger: TGCGTGAAGTTCATAAAAGGAAGAGCTATCAAGGAGTACCAATCAGGTCGGGGCACTCAGGTGTTTGTTACTGCAGAGCAGAATCCAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381621.5 |
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CDS TCA 90 bp | AGACAGGTCCATTTGGTAAGGTATTGGGTACGCTGCAACTCAAGATaGTTGACTCCCCAGTTGATACAGTCTGTGACATCTCCGTTTGTT | + |
Preference number: 5 (lower is better) Translates to: RQVHLVRYWVRCNSR*LTPQLIQSVTSPFV Trigger: AACAAACGGAGATGTCACAGACTGTATCAACTGGGGAGTCAATCATCTTGAGTTGCAGCGTACCCAATACCTTACCAAATGGACCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS-3UTR CAA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTGGTGAAACCTGGAGCTaGCTCTGCCTGAATGCCTGT | + |
Preference number: 5 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSGETWS*LCLNAC Trigger: ACAGGCATTCAGGCAGAGCAAGCTCCAGGTTTCACC...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS-3UTR CAA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTCCTGCAGGTCTGTTCTaGGGAGGTCTTGGATTCTGC | + |
Preference number: 5 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSPAGLF*GGLGFC Trigger: GCAGAATCCAAGACCTCCCAAGAACAGACCTGCAGG...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381621.5 ENST00000381623.4 ENST00000429387.5 |
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CDS-3UTR CAA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTTTTGGCCCTGTTCCCTaGAACCACAAGACAGGTCCA | + |
Preference number: 5 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSFGPVP*NHKTGP Trigger: TGGACCTGTCTTGTGGTTCAAGGGAACAGGGCCAAA...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000381621.5 ENST00000381623.4 ENST00000429387.5 |
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CDS-3UTR CAA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTTCTGTGTTGCCAGGCTaGGTGGTGTCTCCAATCTCT | + |
Preference number: 5 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSSVLPG*VVSPIS Trigger: AGAGATTGGAGACACCACCAAGCCTGGCAACACAGA...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS-3UTR CAA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTGTGGAAAAGTCTGTGTaGCCAGGCTTGGTGGTGTCT | + |
Preference number: 5 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSVEKSV*PGLVVS Trigger: AGACACCACCAAGCCTGGCAACACAGACTTTTCCAC...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS-3UTR CAA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTGAGGCAGCAGCAGGGTaGGACGAAATAGTTTGTGCT | + |
Preference number: 5 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSEAAAG*DEIVCA Trigger: AGCACAAACTATTTCGTCCAACCCTGCTGCTGCCTC...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381621.5 ENST00000381623.4 ENST00000429387.5 |
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CDS-3UTR CAA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTCCATTTGGTAAGGTATaGGGTACGCTGCAACTCAAG | + |
Preference number: 5 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSPFGKV*GTLQLK Trigger: CTTGAGTTGCAGCGTACCCAATACCTTACCAAATGG...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS-3UTR CAA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTACAAGACAGGTCCATTaGGTAAGGTATTGGGTACGC | + |
Preference number: 5 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSTRQVH*VRYWVR Trigger: GCGTACCCAATACCTTACCAAATGGACCTGTCTTGT...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS-3UTR CAA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTGTTGGACGAAATAGTTaGTGCTGTTTCTCTCAGGCA | + |
Preference number: 5 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSVGRNS*CCFSQA Trigger: TGCCTGAGAGAAACAGCACAAACTATTTCGTCCAAC...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381621.5 ENST00000381623.4 ENST00000429387.5 |
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CDS-3UTR CAA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTCCTGATTGGTACTCCTaGATAGCTCTTCCTTTTATG | + |
Preference number: 5 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSPDWYS*IALPFM Trigger: CATAAAAGGAAGAGCTATCAAGGAGTACCAATCAGG...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS-3UTR CAA 90 bp | ACCCAGGTAAATAGACAGATTTATTGTACGATCAAGCTGGCATTTTATGTCAGTACGTTCCTTCCCTGTTaGGATTATTTTGACAGCAAG | + |
Preference number: 5 (lower is better) Translates to: TQVNRQIYCTIKLAFYVSTFLPC*DYFDSK Trigger: CTTGCTGTCAAAATAATCCAAACAGGGAAGGAACGT...ACTGACATAAAATGCCAGCTTGATCGTACAATAAATCTGTCTATTTACCTGGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000381621.5 ENST00000381623.4 ENST00000429387.5 |
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CDS CAA 72 bp | GCAGCCGGAGGCAGCAGCAGGGTTGGACGAAATAGTTaGTGCTGTTTCTCTCAGGCAGGGCCGAGAGGCAGG | + |
Preference number: 6 (lower is better) Translates to: AAGGSSRVGRNS*CCFSQAGPRGR Trigger: CCTGCCTCTCGGCCCTGCCTGAGAGAAACAGCACAAACTATTTCGTCCAACCCTGCTGCTGCCTCCGGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381621.5 ENST00000381623.4 ENST00000429387.5 |
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CDS GCA 72 bp | GCCGGAGGCAGCAGCAGGGTTGGACGAAATAGTTTGTaGTGTTTCTCTCAGGCAGGGCCGAGAGGCAGGTAT | + |
Preference number: 6 (lower is better) Translates to: AGGSSRVGRNSL*CFSQAGPRGRY Trigger: ATACCTGCCTCTCGGCCCTGCCTGAGAGAAACAGCACAAACTATTTCGTCCAACCCTGCTGCTGCCTCCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000381621.5 ENST00000381623.4 ENST00000429387.5 |
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CDS CCA 72 bp | TGCCAGCATCAGCAAGAGAGATTTCACGGATGCGGGTaGAAAAGTCTGTGTTGCCAGGCTTGGTGGTGTCTC | + |
Preference number: 6 (lower is better) Translates to: CQHQQERFHGCG*KSLCCQAWWCL Trigger: GAGACACCACCAAGCCTGGCAACACAGACTTTTCCACCCGCATCCGTGAAATCTCTCTTGCTGATGCTGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS TCA 72 bp | GGAGGTCTTGGATTCTGCTCTGCAGTAACAAACACCTaGGTGCCCCGACCTGATTGGTACTCCTTGATAGCT | + |
Preference number: 6 (lower is better) Translates to: GGLGFCSAVTNT*VPRPDWYSLIA Trigger: AGCTATCAAGGAGTACCAATCAGGTCGGGGCACTCAGGTGTTTGTTACTGCAGAGCAGAATCCAAGACCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381621.5 |
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CDS CCA 72 bp | CACGGATGCGGGTGGAAAAGTCTGTGTTGCCAGGCTTaGTGGTGTCTCCAATCTCTTTTACTCTGGGAAAGT | + |
Preference number: 6 (lower is better) Translates to: HGCGWKSLCCQA*WCLQSLLLWES Trigger: ACTTTCCCAGAGTAAAAGAGATTGGAGACACCACCAAGCCTGGCAACACAGACTTTTCCACCCGCATCCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS CAA 72 bp | TCACGGATGCGGGTGGAAAAGTCTGTGTTGCCAGGCTaGGTGGTGTCTCCAATCTCTTTTACTCTGGGAAAG | + |
Preference number: 6 (lower is better) Translates to: SRMRVEKSVLPG*VVSPISFTLGK Trigger: CTTTCCCAGAGTAAAAGAGATTGGAGACACCACCAAGCCTGGCAACACAGACTTTTCCACCCGCATCCGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS CAA 90 bp | GCATCAGCAAGAGAGATTTCACGGATGCGGGTGGAAAAGTCTGTGTaGCCAGGCTTGGTGGTGTCTCCAATCTCTTTTACTCTGGGAAAG | + |
Preference number: 6 (lower is better) Translates to: ASAREISRMRVEKSV*PGLVVSPISFTLGK Trigger: CTTTCCCAGAGTAAAAGAGATTGGAGACACCACCAAGCCTGGCAACACAGACTTTTCCACCCGCATCCGTGAAATCTCTCTTGCTGATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS TCA 72 bp | TTGGGAGGTCTTGGATTCTGCTCAGTAACAAACACCTaGGTGCCCCGACCTGATTGGTACTCCTTGATAGCT | + |
Preference number: 6 (lower is better) Translates to: LGGLGFCSVTNT*VPRPDWYSLIA Trigger: AGCTATCAAGGAGTACCAATCAGGTCGGGGCACTCAGGTGTTTGTTACTGAGCAGAATCCAAGACCTCCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381623.4 |
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CDS CCA 72 bp | GGATGCGGGTGGAAAAGTCTGTGTTGCCAGGCTTGGTaGTGTCTCCAATCTCTTTTACTCTGGGAAAGTTAC | + |
Preference number: 6 (lower is better) Translates to: GCGWKSLCCQAW*CLQSLLLWESY Trigger: GTAACTTTCCCAGAGTAAAAGAGATTGGAGACACCACCAAGCCTGGCAACACAGACTTTTCCACCCGCATCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS CAA 90 bp | GGCCCTGTTCCCTTGAACCACAAGACAGGTCCATTTGGTAAGGTATaGGGTACGCTGCAACTCAAGATGATTGACTCCCCAGTTGATACA | + |
Preference number: 6 (lower is better) Translates to: GPVPLNHKTGPFGKV*GTLQLKMIDSPVDT Trigger: TGTATCAACTGGGGAGTCAATCATCTTGAGTTGCAGCGTACCCAATACCTTACCAAATGGACCTGTCTTGTGGTTCAAGGGAACAGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS GCA 72 bp | TCCCCAGTTGATACAGTCTGTGACATCTCCGTTTGTTaGACATGGAACACATGTGTGACTCCTGCCAGTTCA | + |
Preference number: 6 (lower is better) Translates to: SPVDTVCDISVC*TWNTCVTPASS Trigger: TGAACTGGCAGGAGTCACACATGTGTTCCATGTGCAACAAACGGAGATGTCACAGACTGTATCAACTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS CAA 72 bp | CCCTTGAACCACAAGACAGGTCCATTTGGTAAGGTATaGGGTACGCTGCAACTCAAGATGATTGACTCCCCA | + |
Preference number: 6 (lower is better) Translates to: PLNHKTGPFGKV*GTLQLKMIDSP Trigger: TGGGGAGTCAATCATCTTGAGTTGCAGCGTACCCAATACCTTACCAAATGGACCTGTCTTGTGGTTCAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS CAA 90 bp | AGAGAGATTTCACGGATGCGGGTGGAAAAGTCTGTGTTGCCAGGCTaGGTGGTGTCTCCAATCTCTTTTACTCTGGGAAAGTTACCTTGT | + |
Preference number: 6 (lower is better) Translates to: REISRMRVEKSVLPG*VVSPISFTLGKLPC Trigger: ACAAGGTAACTTTCCCAGAGTAAAAGAGATTGGAGACACCACCAAGCCTGGCAACACAGACTTTTCCACCCGCATCCGTGAAATCTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS TCA 72 bp | CTGCTCTGCAGTAACAAACACCTGAGTGCCCCGACCTaGTTGGTACTCCTTGATAGCTCTTCCTTTTATGAA | + |
Preference number: 6 (lower is better) Translates to: LLCSNKHLSAPT*LVLLDSSSFYE Trigger: TTCATAAAAGGAAGAGCTATCAAGGAGTACCAATCAGGTCGGGGCACTCAGGTGTTTGTTACTGCAGAGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381621.5 |
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CDS CAA 72 bp | AGCTGTCTCCAGGGAGTCAGAAGAGTATGGGGGCTTTaGTTATTTACTTGTACGTTCCTTCCCTGTTTGGAT | + |
Preference number: 6 (lower is better) Translates to: SCLQGVRRVWGL*LFTCTFLPCLD Trigger: ATCCAAACAGGGAAGGAACGTACAAGTAAATAACAAAAGCCCCCATACTCTTCTGACTCCCTGGAGACAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000381621.5 ENST00000381623.4 ENST00000429387.5 |
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CDS TCA 72 bp | CATTTGGTAAGGTATTGGGTACGCTGCAACTCAAGATaGTTGACTCCCCAGTTGATACAGTCTGTGACATCT | + |
Preference number: 6 (lower is better) Translates to: HLVRYWVRCNSR*LTPQLIQSVTS Trigger: AGATGTCACAGACTGTATCAACTGGGGAGTCAATCATCTTGAGTTGCAGCGTACCCAATACCTTACCAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381621.5 ENST00000381623.4 |
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CDS TCA 72 bp | ATTCTGCTCAGTAACAAACACCTGAGTGCCCCGACCTaGTTGGTACTCCTTGATAGCTCTTCCTTTTATGAA | + |
Preference number: 6 (lower is better) Translates to: ILLSNKHLSAPT*LVLLDSSSFYE Trigger: TTCATAAAAGGAAGAGCTATCAAGGAGTACCAATCAGGTCGGGGCACTCAGGTGTTTGTTACTGAGCAGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381623.4 |
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CDS CAA 72 bp | GGGCTTTTGTTATTTACTTGTACGTTCCTTCCCTGTTaGGATTATTTTGACAGCAAGCCTGTGAGTCCCAGC | + |
Preference number: 6 (lower is better) Translates to: GLLLFTCTFLPC*DYFDSKPVSPS Trigger: GCTGGGACTCACAGGCTTGCTGTCAAAATAATCCAAACAGGGAAGGAACGTACAAGTAAATAACAAAAGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000381621.5 ENST00000381623.4 ENST00000429387.5 |