RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SIPA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000213445

Ensembl transcript IDs: ENST00000394224.3, ENST00000526137.1, ENST00000527525.5, ENST00000528699.1, ENST00000529725.1, ENST00000530226.1, ENST00000531339.5, ENST00000533361.1, ENST00000534313.6, ENST00000534406.1

Found 579 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGGAGGAGGGCCCAGTGTaGCCACAGTGCCCTCAGGGG +
Preference number: 2 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGEEGPV*PQCPQG
Trigger: CCCCTGAGGGCACTGTGGTCACACTGGGCCCTCCTC...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
3UTR-3UTR GCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGGCTAAGACACGCCTCTaGGCAGGGAGAGTTCCTGAG +
Preference number: 2 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGAKTRL*AGRVPE
Trigger: CTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGC...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
3UTR-3UTR TCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGAGGAGGGCCCAGTGTaGCCACAGTGCCCTCAGGGG +
Preference number: 2 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLEEGPV*PQCPQG
Trigger: CCCCTGAGGGCACTGTGGTCACACTGGGCCCTCCTC...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
3UTR-3UTR GCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGGCTAAGACACGCCTCTaGGCAGGGAGAGTTCCTGAG +
Preference number: 2 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGAKTRL*AGRVPE
Trigger: CTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGC...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAAAGCCCAGGCGGCCTTaGCCGTCGCGGGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPKPRRP*PSRGSA
Trigger: GGCGCTGCCCCGCGACGGTCAAGGCCGCCTGGGCTT...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCACGTCGAAGCGCAGCGTaGTCGCCTCCCCGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPRRSAA*SPPRGR
Trigger: ACGGCCGCGGGGAGGCGATCACGCTGCGCTTCGACG...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGGACGCAGGGGCCATaGCCCGCCGAGGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQWTQGP*PAEGSP
Trigger: TGGGGAGCCCTCGGCGGGGCATGGCCCCTGCGTCCA...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCACCGCCGCAGGCTCACTaGCACCGGGCCCAGCGACTC +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPPPQAH*HRAQRL
Trigger: GAGTCGCTGGGCCCGGTGGCAGTGAGCCTGCGGCGG...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGCCAGGCGCAGGCAGCTaGGGCTCAGCTGCGGCGCCA +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQPGAGS*GSAAAP
Trigger: TGGCGCCGCAGCTGAGCCCCAGCTGCCTGCGCCTGG...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCACGCGTGGCCATGGCGTaGAACTGGCGCGCGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPRVAMA*NWRAWP
Trigger: CGGCCACGCGCGCCAGTTCCACGCCATGGCCACGCG...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGCATGCTCTGTGGGCCTaGCTCTCCGGGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQHALWA*LSGGWA
Trigger: GGCCCAGCCCCCGGAGAGTCAGGCCCACAGAGCATG...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGCCTCGCCTGCATCGCTaGCGCTGCGCAGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQPRLHR*RCAGVG
Trigger: GCCCACTCCTGCGCAGCGGCAGCGATGCAGGCGAGG...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGGGCCGCGTTGGGCAGTaGAGGGGGCACAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQGRVGQ*RGHRWG
Trigger: TCCCCACCTGTGCCCCCTGCACTGCCCAACGCGGCC...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGCCGCCGCAGGCTCACTaGCACCGGGCCCAGCGACTC +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGPPQAH*HRAQRL
Trigger: GAGTCGCTGGGCCCGGTGGCAGTGAGCCTGCGGCGG...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGAGTGAGCCCGCTGCCTaGAGCTCGGCGCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGSEPAA*SSAPGP
Trigger: GGGCCCAGGCGCCGAGCTGCAGGCAGCGGGCTCACT...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCACGGCTGGCCTCTTCGTaGCTGTGGGCACGGGCACGG +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPRLASS*LWARAR
Trigger: CCGTGCCCGTGCCCACAGCCACGAAGAGGCCAGCCG...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGCGGCTGGCCTCTTCGTaGCTGTGGGCACGGGCACGG +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQRLASS*LWARAR
Trigger: CCGTGCCCGTGCCCACAGCCACGAAGAGGCCAGCCG...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCACCCGGAAGTCGGCGTTaGCTGCGAAGGGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPPGSRR*LRRGLR
Trigger: GCGGAGGCCCCTTCGCAGCCAACGCCGACTTCCGGG...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGGAACTGGCGCGCGTaGCCGGCCGCCTGCTCACCA +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQWNWRA*PAACSP
Trigger: TGGTGAGCAGGCGGCCGGCCACGCGCGCCAGTTCCA...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCACCCAGAGCTGGCCTCTaGGTGGCTCCCCATCCCCTG +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPPRAGL*VAPHPL
Trigger: CAGGGGATGGGGAGCCACTCAGAGGCCAGCTCTGGG...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGCGTGGTCCGCACGATaGCGCGGTAGCTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPAWSAR*RGSCAG
Trigger: CCCTGCACAGCTACCGCGTCATCGTGCGGACCACGC...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTCGTCGAAGCGCAGCGTaGTCGCCTCCCCGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCRRSAA*SPPRGR
Trigger: ACGGCCGCGGGGAGGCGATCACGCTGCGCTTCGACG...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTTGGACGCAGGGGCCATaGCCCGCCGAGGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCWTQGP*PAEGSP
Trigger: TGGGGAGCCCTCGGCGGGGCATGGCCCCTGCGTCCA...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTCAGCGGGGGCCTTaGTGGCTGGCGCAGCTTGCG +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQCQRGP*WLAQLA
Trigger: CGCAAGCTGCGCCAGCCAGCAAGGCCCCCGCTGACA...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGCTGCATCGCTGCCGCTaGGCAGGAGTGGGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGLHRCR*AGVGPG
Trigger: TCCGGGGCCCACTCCTGCGCAGCGGCAGCGATGCAG...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGGGCCGCGTTGGGCAGTaGAGGGGGCACAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGGRVGQ*RGHRWG
Trigger: TCCCCACCTGTGCCCCCTGCACTGCCCAACGCGGCC...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 24 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGGAAGTCGGCGTTGGCTaGGAAGGGGCCTCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQEVGVG*EGASAS
Trigger: GCTGGCGGAGGCCCCTTCGCAGCCAACGCCGACTTC...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGGTACTGCTGGCGGGTaGGCGTGGCCATGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPGTAGG*AWPWRG
Trigger: TCCACGCCATGGCCACGCGCACCCGCCAGCAGTACC...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTAGTGAGCCCGCTGCCTaGAGCTCGGCGCCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCSEPAA*SSAPGP
Trigger: GGGCCCAGGCGCCGAGCTGCAGGCAGCGGGCTCACT...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGGGCAGGGCACCTCGATaGCTTCGGGGCCGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGGRAPR*LRGRSP
Trigger: AGGCGAGCGGCCCCGAAGGCATCGAGGTGCCCTGCC...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGGAGCCTCGGCCGAGATaGCCAGCAGGCAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQEPRPR*PAGRAP
Trigger: AGGTGCCCTGCCTGCTGGGCATCTCGGCCGAGGCTC...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGCCACGGCTCACCAGCTaGAGGCGCGCCACCACCTCG +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGPRLTS*RRATTS
Trigger: CGAGGTGGTGGCGCGCCTGCAGCTGGTGAGCCGTGG...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGGGGGCTGGGCCGCATTaGCGGGCACGGGTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQGAGPH*RARVFG
Trigger: ACCAAACACCCGTGCCCGCCAATGCGGCCCAGCCCC...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGCACCGCCGGCCCACATaGGCATGCTCTGTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQHRRPT*ACSVGL
Trigger: CAGGCCCACAGAGCATGCCCATGTGGGCCGGCGGTG...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTCAGCGGGGGCCTTGCTaGCTGGCGCAGCTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCQRGPC*LAQLAG
Trigger: GCCCGCAAGCTGCGCCAGCCAGCAAGGCCCCCGCTG...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGGCCTCTTCGTGGCTGTaGGCACGGGCACGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGASSWL*ARARGL
Trigger: CAGCCCCCGTGCCCGTGCCCACAGCCACGAAGAGGC...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCATGGACACGGCCGCGTTaGGCAGTGCAGGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPWTRPR*AVQGAQ
Trigger: CTGTGCCCCCTGCACTGCCCAACGCGGCCGTGTCCA...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGAAGGCAGGGGTGTCCTaGGTGCGGCTCACGGCCACC +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQKAGVS*VRLTAT
Trigger: GGTGGCCGTGAGCCGCACCCAGGACACCCCTGCCTT...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTCGCGTGGCCATGGCGTaGAACTGGCGCGCGTGGCCG +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCRVAMA*NWRAWP
Trigger: CGGCCACGCGCGCCAGTTCCACGCCATGGCCACGCG...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGGGGTGCGCGTGGCCATaGCGTGGAACTGGCGCGCGT +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGGCAWP*RGTGAR
Trigger: ACGCGCGCCAGTTCCACGCCATGGCCACGCGCACCC...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
68% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGGCCTCCCCGCGGCCGTaGTACAGGTCCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGASPRP*YRSSCC
Trigger: GCAGCAGCTGGACCTGTACCACGGCCGCGGGGAGGC...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGCCTCAGGGGCCCAGGTaGTTCCAGACGGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQPQGPR*FQTAQA
Trigger: GGCCTGAGCCGTCTGGAACCACCTGGGCCCCTGAGG...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGCGCGACAGGCGCAATTaGACACTACGCGGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQRDRRN*TLRGRR
Trigger: GCGACGGCCGCGTAGTGTTCAATTGCGCCTGTCGCG...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR TCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAAGCGCTCCACGTGCGTaGCGAATCCCTCGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPSAPRA*RIPRRP
Trigger: TGGACGCCGAGGGATTCGTCACGCACGTGGAGCGCT...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGAGCGCTCCACGTGCGTaGCGAATCCCTCGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQSAPRA*RIPRRP
Trigger: TGGACGCCGAGGGATTCGTCACGCACGTGGAGCGCT...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGCGCAGGGAGAGTTCCTaGGGAGGGCCCAGTGTGACC +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQRRESS*GGPSVT
Trigger: GGTCACACTGGGCCCTCCTCAGGAACTCTCCCTGCG...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGTGTCAGCGGGGGCCTTaGTGGCTGGCGCAGCTTGCG +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGCQRGP*WLAQLA
Trigger: CGCAAGCTGCGCCAGCCAGCAAGGCCCCCGCTGACA...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCACTCGGCTCGAAGGTGTaGGGTGTCAGCGGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPLGSKV*GVSGGL
Trigger: AAGGCCCCCGCTGACACCGCACACCTTCGAGCCGAG...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTCTGCATCGCTGCCGCTaGGCAGGAGTGGGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCLHRCR*AGVGPG
Trigger: TCCGGGGCCCACTCCTGCGCAGCGGCAGCGATGCAG...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTCCTCGCCTGCATCGCTaGCGCTGCGCAGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCPRLHR*RCAGVG
Trigger: GCCCACTCCTGCGCAGCGGCAGCGATGCAGGCGAGG...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCACCGGGTGGAAGTGGCTaGAGGTCGGCTGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPPGGSG*RSAGLF
Trigger: GAAGAGGCCAGCCGACCTGCAGCCACTTCCACCCGG...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGCGTGGCCGGCCGCCTaGTCACCATTCAGCGCTTTG +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPAWPAA*SPFSAL
Trigger: CAAAGCGCTGAATGGTGAGCAGGCGGCCGGCCACGC...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGAGGTCTTGCAGGTACTaGTGGCGGGTGCGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQRSCRY*WRVRVA
Trigger: GGCCACGCGCACCCGCCAGCAGTACCTGCAAGACCT...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGGAGCCTCGGCCGAGATaGCCAGCAGGCAGGGCACCT +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGEPRPR*PAGRAP
Trigger: AGGTGCCCTGCCTGCTGGGCATCTCGGCCGAGGCTC...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGCCCTGGACCTCATCCTaGACAGGATCTGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQPWTSS*TGSGAP
Trigger: GGGGGCCCCAGATCCTGTGCAGGATGAGGTCCAGGG...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGGGGGCTGGGCCGCATTaGCGGGCACGGGTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGGAGPH*RARVFG
Trigger: ACCAAACACCCGTGCCCGCCAATGCGGCCCAGCCCC...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
67% GC, longest homopolymer 9 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGGGGGGCCTTGCTGGCTaGCGCAGCTTGCGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGGGLAG*RSLRAK
Trigger: CTTTGCCCGCAAGCTGCGCCAGCCAGCAAGGCCCCC...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
67% GC, longest homopolymer 10 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGGAGTGGGCCCCGGACTaGCCTCGGCTCGAAGGTGTG +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGEWAPD*PRLEGV
Trigger: CACACCTTCGAGCCGAGGCCAGTCCGGGGCCCACTC...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTGCCTCTTCGTGGCTGTaGGCACGGGCACGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCASSWL*ARARGL
Trigger: CAGCCCCCGTGCCCGTGCCCACAGCCACGAAGAGGC...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTCGGCTGGCCTCTTCGTaGCTGTGGGCACGGGCACGG +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCRLASS*LWARAR
Trigger: CCGTGCCCGTGCCCACAGCCACGAAGAGGCCAGCCG...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCATGGCTGCAGGTCGGCTaGCCTCTTCGTGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPWLQVG*PLRGCG
Trigger: CCCACAGCCACGAAGAGGCCAGCCGACCTGCAGCCA...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGGCTGCAGGTCGGCTaGCCTCTTCGTGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQWLQVG*PLRGCG
Trigger: CCCACAGCCACGAAGAGGCCAGCCGACCTGCAGCCA...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGAGAGCCGGGTGGAAGTaGCTGCAGGTCGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQRAGWK*LQVGWP
Trigger: AGGCCAGCCGACCTGCAGCCACTTCCACCCGGCTCT...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGCCAGGGTCCCAGAGCTaGCCTCTGAGTGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQPGSQS*PLSGSP
Trigger: TGGGGAGCCACTCAGAGGCCAGCTCTGGGACCCTGG...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGGCTCCTCCAGGATaGACACGGCCGCGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPVAPPG*TRPRWA
Trigger: TGCCCAACGCGGCCGTGTCCATCCTGGAGGAGCCAC...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGGCGCGTCCTCCGAGATaGTGCCACGGAGTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQARPPR*CHGVSG
Trigger: TCCGGACACTCCGTGGCACCATCTCGGAGGACGCGC...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCACGGCCACCCTGTAGGTaGTGTGTGGCGTGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPRPPCR*CVACRV
Trigger: CACCCTGCACGCCACACACCACCTACAGGGTGGCCG...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTGCTGGCGGGTGCGCGTaGCCATGGCGTGGAACTGGC +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCAGGCA*PWRGTG
Trigger: GCCAGTTCCACGCCATGGCCACGCGCACCCGCCAGC...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGAGGCTGGGCAGAGTCTaGCCGCACACGCGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGRLGRV*PHTRRR
Trigger: CCTCCTGCGCGTGTGCGGCCAGACTCTGCCCAGCCT...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGGTCCGGGGTGGTGTTaGGCAGGACTGGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPGPGWC*AGLGPH
Trigger: ATGAGGCCCCAGTCCTGCCCAACACCACCCCGGACC...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGATGGCTTGGCTGTGGTaGCCAGGAGGAGGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQMAWLW*PGGGPG
Trigger: CCCCGGACCTCCTCCTGGCCACCACAGCCAAGCCAT...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAATGGCTTGGCTGTGGTaGCCAGGAGGAGGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPMAWLW*PGGGPG
Trigger: CCCCGGACCTCCTCCTGGCCACCACAGCCAAGCCAT...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGCCTCAGGGGCCCAGGTaGTTCCAGACGGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGPQGPR*FQTAQA
Trigger: GGCCTGAGCCGTCTGGAACCACCTGGGCCCCTGAGG...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTGCCTCCCCGCGGCCGTaGTACAGGTCCAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCASPRP*YRSSCS
Trigger: CGAGCAGCTGGACCTGTACCACGGCCGCGGGGAGGC...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527525.5
CDS-3UTR TCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGCAGGCCCCCACATCCTaGGGAAGGTGCTGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGQAPTS*GRCWGH
Trigger: GTGACCCCAGCACCTTCCTCAGGATGTGGGGGCCTG...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000394224.3
CDS-3UTR TCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCATGGCTCCCCATCCCCTaGGACCTCGGAGCCCAATCA +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPWLPIP*DLGAQS
Trigger: TGATTGGGCTCCGAGGTCTCAGGGGATGGGGAGCCA...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTCCCAGAGCTGGCCTCTaGGTGGCTCCCCATCCCCTG +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCPRAGL*VAPHPL
Trigger: CAGGGGATGGGGAGCCACTCAGAGGCCAGCTCTGGG...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTGAGGAGGGCCCAGTGTaGCCACAGTGCCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCEEGPV*PQCPQG
Trigger: CCCCTGAGGGCACTGTGGTCACACTGGGCCCTCCTC...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGCGGCCCACATGGGCATaGTCTGTGGGCCTGACTCTC +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQRPTWA*SVGLTL
Trigger: GAGAGTCAGGCCCACAGAGCATGCCCATGTGGGCCG...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGCCGGGTGGAAGTGGCTaGAGGTCGGCTGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGPGGSG*RSAGLF
Trigger: GAAGAGGCCAGCCGACCTGCAGCCACTTCCACCCGG...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAAGGCTCTGGTTCCTCTaGTGGCAGCCCCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPRLWFL*WQPQQC
Trigger: GCACTGCTGGGGCTGCCAGCAGAGGAACCAGAGCCT...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAAAGCCAGGTGCCCCATaGAGCAGGTCCGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPKPGAP*SRSELA
Trigger: TGCCAGCTCGGACCTGCTGCATGGGGCACCTGGCTT...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGCGTCCTCCGAGATGGTaGCACGGAGTGTCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQRPPRW*HGVSGA
Trigger: AGCTCCGGACACTCCGTGGCACCATCTCGGAGGACG...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTCAGCTGGGGCTCAGCTaGGGCGCCACGTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCQLGLS*GATCSR
Trigger: TCTGGAGCACGTGGCGCCGCAGCTGAGCCCCAGCTG...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGGCGTGGCCGGCCGCCTaGTCACCATTCAGCGCTTTG +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGAWPAA*SPFSAL
Trigger: CAAAGCGCTGAATGGTGAGCAGGCGGCCGGCCACGC...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGAAGCGCTCCACGTaGGTGACGAATCCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPVKRST*VTNPSA
Trigger: CGCCGAGGGATTCGTCACGCACGTGGAGCGCTTCAC...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGCCCTGGACCTCATCCTaGACAGGATCTGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGPWTSS*TGSGAP
Trigger: GGGGGCCCCAGATCCTGTGCAGGATGAGGTCCAGGG...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTGCTCCGGCGCCGGGTTaGCCTTGTCCTCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCAPAPG*PCPQSH
Trigger: GTGGCTCTGAGGACAAGGGCAACCCGGCGCCGGAGC...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGAGGAGGCGTGTGGCTaGACTCTCAGACTCCGCCTG +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPEEACG*TLRLRL
Trigger: CAGGCGGAGTCTGAGAGTGCAGCCACACGCCTCCTC...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTGGGGGCCTTGCTGGCTaGCGCAGCTTGCGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCGGLAG*RSLRAK
Trigger: CTTTGCCCGCAAGCTGCGCCAGCCAGCAAGGCCCCC...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGAGAGCCGGGTGGAAGTaGCTGCAGGTCGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGRAGWK*LQVGWP
Trigger: AGGCCAGCCGACCTGCAGCCACTTCCACCCGGCTCT...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGCCAGGGTCCCAGAGCTaGCCTCTGAGTGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGPGSQS*PLSGSP
Trigger: TGGGGAGCCACTCAGAGGCCAGCTCTGGGACCCTGG...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGTCCGAGCTGGCAGCCTaGTCCTCGGCTGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGSELAA*SSAEAR
Trigger: CCTGGCTTCAGCCGAGGACCAGGCTGCCAGCTCGGA...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGGTGGCTCCTCCAGGATaGACACGGCCGCGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGVAPPG*TRPRWA
Trigger: TGCCCAACGCGGCCGTGTCCATCCTGGAGGAGCCAC...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGCGTCCGTGGTACCTTaGGTGAAGCTGAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPASVVP*VKLSPG
Trigger: GCCTGGGCTCAGCTTCACCCAAGGTACCACGGACGC...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTAAGGCAGGGGTGTCCTaGGTGCGGCTCACGGCCACC +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCKAGVS*VRLTAT
Trigger: GGTGGCCGTGAGCCGCACCCAGGACACCCCTGCCTT...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCATCTTGCAGGTACTGCTaGCGGGTGCGCGTGGCCATG +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPSCRYC*RVRVAM
Trigger: CATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGA...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTAGGCTGGGCAGAGTCTaGCCGCACACGCGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCRLGRV*PHTRRR
Trigger: CCTCCTGCGCGTGTGCGGCCAGACTCTGCCCAGCCT...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGCTGATGGCTTGGCTGTaGTGGCCAGGAGGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQLMAWL*WPGGGP
Trigger: CGGACCTCCTCCTGGCCACCACAGCCAAGCCATCAG...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCACTGCCTGGCCTGTCCTaGGTCAGGGGTGTCTCACTG +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPLPGLS*VRGVSL
Trigger: CAGTGAGACACCCCTGACCCAGGACAGGCCAGGCAG...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGTGGCTCCCCATCCCCTaGGACCTCGGAGCCCAATCA +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGWLPIP*DLGAQS
Trigger: TGATTGGGCTCCGAGGTCTCAGGGGATGGGGAGCCA...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCACAGAGAGCTGCGTGGTaGCAGCGAGTTCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPQRAAW*QRVLAV
Trigger: CACAGCCAGAACTCGCTGTCACCACGCAGCTCTCTG...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTCAGCACTGGGTACTaGTGGCTTGGCTGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPVSTGY*WLGCGG
Trigger: GCCACCACAGCCAAGCCATCAGTACCCAGTGCTGAC...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCACTGGCTGGCGCAGCTTaGGGGCAAAGAGGTCATCTG +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPLAGAA*GQRGHL
Trigger: CAGATGACCTCTTTGCCCGCAAGCTGCGCCAGCCAG...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTCTCGGCTCGAAGGTGTaGGGTGTCAGCGGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCLGSKV*GVSGGL
Trigger: AAGGCCCCCGCTGACACCGCACACCTTCGAGCCGAG...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGCGTCCTCCGAGATGGTaGCACGGAGTGTCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGRPPRW*HGVSGA
Trigger: AGCTCCGGACACTCCGTGGCACCATCTCGGAGGACG...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCACCCGGCAGTACAGGATaGCCACCTTGCGTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPPGSTG*PPCVGS
Trigger: GCTTCCAACGCAAGGTGGGCATCCTGTACTGCCGGG...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGGCAGAAGGGCTTGCTaGCAGGCTCCTGGAACACGA +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPGRRAC*QAPGTR
Trigger: TCGTGTTCCAGGAGCCTGGCAGCAAGCCCTTCTGCC...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCATTGGTGGCCAGGTCTTaGAGGTACTGCTGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPLVARS*RYCWRV
Trigger: CACCCGCCAGCAGTACCTGCAAGACCTGGCCACCAA...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGCACAGGTGCAGCAGCTaGTTTGTGGTGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQHRCSS*FVVGSR
Trigger: CCTGCTGCCCACCACAAAGCAGCTGCTGCACCTGTG...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGCAGGCCCTGGAGGACTaGCACCATCTTGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQQALED*HHLAGT
Trigger: TGTGCCTGCAAGATGGTGGCAGTCCTCCAGGGCCTG...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCACAGGCCCTGGAGGACTaGCACCATCTTGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPQALED*HHLAGT
Trigger: TGTGCCTGCAAGATGGTGGCAGTCCTCCAGGGCCTG...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGCAGAGCCACTGGGACTaGCTGGCCTGTCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGQSHWD*LACPGS
Trigger: TGACCCAGGACAGGCCAGGCAGTCCCAGTGGCTCTG...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAATCTCCGAGATGGCCTaGCACTCGTCCTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPISEMA*HSSSRV
Trigger: GACCCTGGAGGACGAGTGGCAGGCCATCTCGGAGAT...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGCAAAGAGGTCATCTGTaGACGCAGGGGCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQQRGHL*TQGPCP
Trigger: GGGGCATGGCCCCTGCGTCCACAGATGACCTCTTTG...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGCTCTGGTTCCTCTGCTaGCAGCCCCAGCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGLWFLC*QPQQCQ
Trigger: CTGGCACTGCTGGGGCTGCCAGCAGAGGAACCAGAG...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGTGGGAAGGCAGGCTCTaGTTCCTCTGCTGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGWEGRL*FLCWQP
Trigger: GGGCTGCCAGCAGAGGAACCAGAGCCTGCCTTCCCA...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTCGAGGCTCAAGCACTaGTGGGAAGGCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQSRLKH*WEGRLW
Trigger: CCAGAGCCTGCCTTCCCACCAGTGCTTGAGCCTCGA...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGTCTTGCAGGTACTGCTaGCGGGTGCGCGTGGCCATG +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGSCRYC*RVRVAM
Trigger: CATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGA...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGAGCAGGGTCACCCCCTaGACCTCATCCTGCACAGGA +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQSRVTP*TSSCTG
Trigger: TCCTGTGCAGGATGAGGTCCAGGGGGTGACCCTGCT...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAAGCAGGGTCACCCCCTaGACCTCATCCTGCACAGGA +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPSRVTP*TSSCTG
Trigger: TCCTGTGCAGGATGAGGTCCAGGGGGTGACCCTGCT...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGGTGTTGGGCAGGACTaGGGCCTCATCCGACAGAGA +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPGVGQD*GLIRQR
Trigger: TCTCTGTCGGATGAGGCCCCAGTCCTGCCCAACACC...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTGGTCCGGGGTGGTGTTaGGCAGGACTGGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCGPGWC*AGLGPH
Trigger: ATGAGGCCCCAGTCCTGCCCAACACCACCCCGGACC...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTATGGCTTGGCTGTGGTaGCCAGGAGGAGGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCMAWLW*PGGGPG
Trigger: CCCCGGACCTCCTCCTGGCCACCACAGCCAAGCCAT...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGCTGATGGCTTGGCTGTaGTGGCCAGGAGGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGLMAWL*WPGGGP
Trigger: CGGACCTCCTCCTGGCCACCACAGCCAAGCCATCAG...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGAGGGTCTCCACTCTCTaGGATGGGCTGTCCCTCTCG +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQRVSTL*DGLSLS
Trigger: CGAGAGGGACAGCCCATCCCAGAGAGTGGAGACCCT...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGCCAGGAGGAGGCGTGTaGCTGCACTCTCAGACTCCG +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGPGGGV*LHSQTP
Trigger: CGGAGTCTGAGAGTGCAGCCACACGCCTCCTCCTGG...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTCGTCCTCCGAGATGGTaGCACGGAGTGTCCGGAGCT +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCRPPRW*HGVSGA
Trigger: AGCTCCGGACACTCCGTGGCACCATCTCGGAGGACG...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAAGCAAGGTGAGAAACTaGATGAAGGCCGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPSKVRN*MKAGPA
Trigger: GGCGGGACCGGCCTTCATGCAGTTTCTCACCTTGCT...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCACGCTTCCGGAGGAGCTaGTGCTGGTTATTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPRFRRS*CWLLGV
Trigger: CACCCCTAATAACCAGCAGCAGCTCCTCCGGAAGCG...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGGGCAGAAGGGCTTGCTaGCAGGCTCCTGGAACACGA +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGGRRAC*QAPGTR
Trigger: TCGTGTTCCAGGAGCCTGGCAGCAAGCCCTTCTGCC...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGATCTCCGAGATGGCCTaGCACTCGTCCTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGISEMA*HSSSRV
Trigger: GACCCTGGAGGACGAGTGGCAGGCCATCTCGGAGAT...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGGCTAAGACACGCCTCTaGGCAGGGAGAGTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQAKTRL*AGRVPE
Trigger: CTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGC...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTTGGGAAGGCAGGCTCTaGTTCCTCTGCTGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCWEGRL*FLCWQP
Trigger: GGGCTGCCAGCAGAGGAACCAGAGCCTGCCTTCCCA...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAAGGCTCAAGCACTGGTaGGAAGGCAGGCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPRLKHW*EGRLWF
Trigger: GAACCAGAGCCTGCCTTCCCACCAGTGCTTGAGCCT...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGCGAGGTTCGGTTCTGTaGCTCCTCCAGGATGGACAC +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQRGSVL*LLQDGH
Trigger: GTGTCCATCCTGGAGGAGCCACAGAACCGAACCTCG...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTGCGTCCGTGGTACCTTaGGTGAAGCTGAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCASVVP*VKLSPG
Trigger: GCCTGGGCTCAGCTTCACCCAAGGTACCACGGACGC...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAATGTCGTTGCCAATGTaGCGCTTCCGGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPMSLPM*RFRRSC
Trigger: GCAGCTCCTCCGGAAGCGCCACATTGGCAACGACAT...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGGGTGTTGGGCAGGACTaGGGCCTCATCCGACAGAGA +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGGVGQD*GLIRQR
Trigger: TCTCTGTCGGATGAGGCCCCAGTCCTGCCCAACACC...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCATGGGTACTGATGGCTTaGCTGTGGTGGCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPWVLMA*LWWPGG
Trigger: TCCTCCTGGCCACCACAGCCAAGCCATCAGTACCCA...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTCTGCCTGGCCTGTCCTaGGTCAGGGGTGTCTCACTG +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCLPGLS*VRGVSL
Trigger: CAGTGAGACACCCCTGACCCAGGACAGGCCAGGCAG...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAAGGCAATCTCCGAGATaGCCTGCCACTCGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPRQSPR*PATRPP
Trigger: TGGAGGACGAGTGGCAGGCCATCTCGGAGATTGCCT...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTCCAGGAGGAGGCGTGTaGCTGCACTCTCAGACTCCG +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCPGGGV*LHSQTP
Trigger: CGGAGTCTGAGAGTGCAGCCACACGCCTCCTCCTGG...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGCAAACAGGGAAGGGGTaGAGGCCACTTCCGCCACCA +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGQTGKG*RPLPPP
Trigger: TGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTG...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGGGTCCAGCTGCTCGTTaGTGGCCAGGTCTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGGPAAR*WPGLAG
Trigger: ACCTGCAAGACCTGGCCACCAACGAGCAGCTGGACC...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000527525.5
CDS-3UTR TCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGCTTGCTCATCCAGTGTaGGCAGCGTCCGTGGTACCT +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGLAHPV*AASVVP
Trigger: AGGTACCACGGACGCTGCTCACACTGGATGAGCAAG...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCAAGCCCAGGCGGCCTTaGCCGTCGCGGGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGKPRRP*PSRGSA
Trigger: GGCGCTGCCCCGCGACGGTCAAGGCCGCCTGGGCTT...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGGCAGACAGGGAGGTCTaGACCCCATGTGACAGATGG +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGADREV*TPCDRW
Trigger: CCATCTGTCACATGGGGTTCAGACCTCCCTGTCTGC...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000527525.5
CDS-3UTR GCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTAGCTGCGGCGCCACGTaGTCCAGAAGTTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCSCGAT*SRSFLG
Trigger: CCCAAGGAAACTTCTGGAGCACGTGGCGCCGCAGCT...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGACCACTAGGAACACGTaGTGGAAGTGCGAGCGGATG +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQTTRNT*WKCERM
Trigger: CATCCGCTCGCACTTCCAGCACGTGTTCCTAGTGGT...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTTTGGTGGCCAGGTCTTaGAGGTACTGCTGGCGGGTG +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCLVARS*RYCWRV
Trigger: CACCCGCCAGCAGTACCTGCAAGACCTGGCCACCAA...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGAGCGAGTTCTGGCTGTaGAGGAACTCAGTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQSEFWL*RNSVLS
Trigger: GGAGAGGACTGAGTTCCTGCACAGCCAGAACTCGCT...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTCTCTCAGACTCCGCCTaGAGCCGCCGGTTGTTGTGT +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCLSDSA*SRRLLC
Trigger: ACACAACAACCGGCGGCTGCAGGCGGAGTCTGAGAG...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGAGGCTCAAGCACTGGTaGGAAGGCAGGCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGRLKHW*EGRLWF
Trigger: GAACCAGAGCCTGCCTTCCCACCAGTGCTTGAGCCT...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTTCGAGGCTCAAGCACTaGTGGGAAGGCAGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCSRLKH*WEGRLW
Trigger: CCAGAGCCTGCCTTCCCACCAGTGCTTGAGCCTCGA...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGCTGTGGAATCCGTTTTaGTGTCTAGCTGGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQLWNPF*CLAGPG
Trigger: ACCGGGCCCAGCTAGACACCAAAACGGATTCCACAG...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAACTAGGAACACGTGCTaGAAGTGCGAGCGGATGGTG +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPTRNTC*KCERMV
Trigger: CACCATCCGCTCGCACTTCCAGCACGTGTTCCTAGT...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTCACCATTCAGCGCTTTaGCCAGCAGGAAGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCHHSAL*PAGRPG
Trigger: TCCGGGCCTTCCTGCTGGCCAAAGCGCTGAATGGTG...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGGGTGACAGCGAGTTCTaGCTGTGCAGGAACTCAGTC +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQGDSEF*LCRNSV
Trigger: GACTGAGTTCCTGCACAGCCAGAACTCGCTGTCACC...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGGTGACAGCGAGTTCTaGCTGTGCAGGAACTCAGTC +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPGDSEF*LCRNSV
Trigger: GACTGAGTTCCTGCACAGCCAGAACTCGCTGTCACC...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTTGTCCTCAGAGCCACTaGGACTGCCTGGCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCCPQSH*DCLACP
Trigger: AGGACAGGCCAGGCAGTCCCAGTGGCTCTGAGGACA...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGCAGAGACAAGGTACGTaGCAGAAAGGAGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQQRQGT*QKGGPQ
Trigger: CTGAGGGCCTCCTTTCTGCCACGTACCTTGTCTCTG...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTAGGGTCTCCACTCTCTaGGATGGGCTGTCCCTCTCG +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCRVSTL*DGLSLS
Trigger: CGAGAGGGACAGCCCATCCCAGAGAGTGGAGACCCT...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGCCAGCTGCTCGTTGGTaGCCAGGTCTTGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGPAARW*PGLAGT
Trigger: AGTACCTGCAAGACCTGGCCACCAACGAGCAGCTGG...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000527525.5
CDS-3UTR TCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTACGTCGAAGCGCAGCGTaGTCGCCTCCCCGCGGCCGT +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLRRSAA*SPPRGR
Trigger: ACGGCCGCGGGGAGGCGATCACGCTGCGCTTCGACG...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTTGGTACAGGTCCAGCTaGTGCTCGGAGAAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCWYRSS*CSEKVQ
Trigger: CTGGACCTTCTCCGAGCAGCAGCTGGACCTGTACCA...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCAGCGGGGGCCTTGCTaGCTGGCGCAGCTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGQRGPC*LAQLAG
Trigger: GCCCGCAAGCTGCGCCAGCCAGCAAGGCCCCCGCTG...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTACAGCGGGGGCCTTGCTaGCTGGCGCAGCTTGCGGGC +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLQRGPC*LAQLAG
Trigger: GCCCGCAAGCTGCGCCAGCCAGCAAGGCCCCCGCTG...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTACCAGGCGCAGGCAGCTaGGGCTCAGCTGCGGCGCCA +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLPGAGS*GSAAAP
Trigger: TGGCGCCGCAGCTGAGCCCCAGCTGCCTGCGCCTGG...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGACTAGGAACACGTGCTaGAAGTGCGAGCGGATGGTG +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGTRNTC*KCERMV
Trigger: CACCATCCGCTCGCACTTCCAGCACGTGTTCCTAGT...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGTGGTCACCTCGTTGGTaGCCAGGTCTTGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGWSPRW*PGLAGT
Trigger: AGTACCTGCAAGACCTGGCCACCAACGAGGTGACCA...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTTGGGTACTGATGGCTTaGCTGTGGTGGCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCWVLMA*LWWPGG
Trigger: TCCTCCTGGCCACCACAGCCAAGCCATCAGTACCCA...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCCATGCTCTGTGGGCCTaGCTCTCCGGGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGHALWA*LSGGWA
Trigger: GGCCCAGCCCCCGGAGAGTCAGGCCCACAGAGCATG...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTACATGCTCTGTGGGCCTaGCTCTCCGGGGGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLHALWA*LSGGWA
Trigger: GGCCCAGCCCCCGGAGAGTCAGGCCCACAGAGCATG...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGAGCATGGACTCCAAGTaGGAGACCTTCTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGSMDSK*ETFSER
Trigger: CCTCTCAGAGAAGGTCTCTCACTTGGAGTCCATGCT...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTACAGGTCGGCGGTGGGTaGGCCCAGCTGCTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLQVGGG*AQLLGG
Trigger: GCCTCCAAGCAGCTGGGCTCACCCACCGCCGACCTG...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTACCTCGCCTGCATCGCTaGCGCTGCGCAGGAGTGGGC +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLPRLHR*RCAGVG
Trigger: GCCCACTCCTGCGCAGCGGCAGCGATGCAGGCGAGG...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCGGCCGCGTTGGGCAGTaGAGGGGGCACAGGTGGGGA +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGGRVGQ*RGHRWG
Trigger: TCCCCACCTGTGCCCCCTGCACTGCCCAACGCGGCC...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGTGTAGAGGGAGTGCGTaGCTGTGGAATCCGTTTTGG +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGCRGSA*LWNPFW
Trigger: CCAAAACGGATTCCACAGGCACGCACTCCCTCTACA...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGTGGTCACAATGTCGTTaGCAATGTGGCGCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGWSQCR*QCGASG
Trigger: TCCGGAAGCGCCACATTGGCAACGACATTGTGACCA...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCGGCAGGGCACCTCGATaGCTTCGGGGCCGCTCGCCT +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGGRAPR*LRGRSP
Trigger: AGGCGAGCGGCCCCGAAGGCATCGAGGTGCCCTGCC...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTACCACGGCTCACCAGCTaGAGGCGCGCCACCACCTCG +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLPRLTS*RRATTS
Trigger: CGAGGTGGTGGCGCGCCTGCAGCTGGTGAGCCGTGG...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTAGCGAGTTCTGGCTGTaGAGGAACTCAGTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCSEFWL*RNSVLS
Trigger: GGAGAGGACTGAGTTCCTGCACAGCCAGAACTCGCT...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCGCCTCTTCGTGGCTGTaGGCACGGGCACGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGASSWL*ARARGL
Trigger: CAGCCCCCGTGCCCGTGCCCACAGCCACGAAGAGGC...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCCCCGGAAGTCGGCGTTaGCTGCGAAGGGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGPGSRR*LRRGLR
Trigger: GCGGAGGCCCCTTCGCAGCCAACGCCGACTTCCGGG...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTGGAACTGGCGCGCGTaGCCGGCCGCCTGCTCACCA +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGWNWRA*PAACSP
Trigger: TGGTGAGCAGGCGGCCGGCCACGCGCGCCAGTTCCA...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTATGGAACTGGCGCGCGTaGCCGGCCGCCTGCTCACCA +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLWNWRA*PAACSP
Trigger: TGGTGAGCAGGCGGCCGGCCACGCGCGCCAGTTCCA...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCGGGTGCGCGTGGCCATaGCGTGGAACTGGCGCGCGT +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGGCAWP*RGTGAR
Trigger: ACGCGCGCCAGTTCCACGCCATGGCCACGCGCACCC...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGCTGGCGGGTGCGCGTaGCCATGGCGTGGAACTGGC +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLAGGCA*PWRGTG
Trigger: GCCAGTTCCACGCCATGGCCACGCGCACCCGCCAGC...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCGCCTCCCCGCGGCCGTaGTACAGGTCCAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGASPRP*YRSSCC
Trigger: GCAGCAGCTGGACCTGTACCACGGCCGCGGGGAGGC...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAACCTCGCCCACGGCTTaGCCGGGGGACCCGTCGAAG +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLTSPTA*PGDPSK
Trigger: CTTCGACGGGTCCCCCGGCCAAGCCGTGGGCGAGGT...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGACCTCGCCCACGGCTTaGCCGGGGGACCCGTCGAAG +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGTSPTA*PGDPSK
Trigger: CTTCGACGGGTCCCCCGGCCAAGCCGTGGGCGAGGT...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCCTCGGGCCGGAGGCTaGGCAGAGTCTGGCCGCACA +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGPRAGG*AESGRT
Trigger: TGTGCGGCCAGACTCTGCCCAGCCTCCGGCCCGAGG...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTACCTCGGGCCGGAGGCTaGGCAGAGTCTGGCCGCACA +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLPRAGG*AESGRT
Trigger: TGTGCGGCCAGACTCTGCCCAGCCTCCGGCCCGAGG...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGGAGGTTCCCAGGCTCTaGCTCAGCATCAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGEVPRL*LSIRFW
Trigger: CCAAAATCTGATGCTGAGCCAGAGCCTGGGAACCTC...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCCCCAGAGCTGGCCTCTaGGTGGCTCCCCATCCCCTG +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGPRAGL*VAPHPL
Trigger: CAGGGGATGGGGAGCCACTCAGAGGCCAGCTCTGGG...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCGCGTGGTCCGCACGATaGCGCGGTAGCTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGAWSAR*RGSCAG
Trigger: CCCTGCACAGCTACCGCGTCATCGTGCGGACCACGC...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGCAGGCCGAAGCGTaGAGCCGAGTCCAGCGACGT +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLGQAEA*SRVQRR
Trigger: ACGTCGCTGGACTCGGCTTCACGCTTCGGCCTGCCC...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR TCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGAAGCCCAGGCGGCCTTaGCCGTCGCGGGGCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVEKPRRP*PSRGSA
Trigger: GGCGCTGCCCCGCGACGGTCAAGGCCGCCTGGGCTT...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR TCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGGAGGAGGGCCCAGTGTaGCCACAGTGCCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGEEGPV*PQCPQG
Trigger: CCCCTGAGGGCACTGTGGTCACACTGGGCCCTCCTC...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCGAGGAGGGCCCAGTGTaGCCACAGTGCCCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGEEGPV*PQCPQG
Trigger: CCCCTGAGGGCACTGTGGTCACACTGGGCCCTCCTC...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGCCATAGAAGTATTTaGGGTAGTAGCCAGCACCCA +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQCHRSI*GSSQHP
Trigger: TGGGTGCTGGCTACTACCGCAAATACTTCTATGGCA...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTACAGCTGGGGCTCAGCTaGGGCGCCACGTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLQLGLS*GATCSR
Trigger: TCTGGAGCACGTGGCGCCGCAGCTGAGCCCCAGCTG...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTTGTAGAGGGAGTGCGTaGCTGTGGAATCCGTTTTGG +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCCRGSA*LWNPFW
Trigger: CCAAAACGGATTCCACAGGCACGCACTCCCTCTACA...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCGAAGTCGGCGTTGGCTaGGAAGGGGCCTCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGEVGVG*EGASAS
Trigger: GCTGGCGGAGGCCCCTTCGCAGCCAACGCCGACTTC...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGGGTACTGCTGGCGGGTaGGCGTGGCCATGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGGTAGG*AWPWRG
Trigger: TCCACGCCATGGCCACGCGCACCCGCCAGCAGTACC...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGCTCCGGCGCCGGGTTaGCCTTGTCCTCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLAPAPG*PCPQSH
Trigger: GTGGCTCTGAGGACAAGGGCAACCCGGCGCCGGAGC...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTGTGGCAGCAGTTCCTaGCCTCTGGGGCTCCCGCCC +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGCGSSS*PLGLPP
Trigger: GGGCGGGAGCCCCAGAGGGCAGGAACTGCTGCCACA...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534313.6
CDS-3UTR CCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGGGGGGCCTTGCTGGCTaGCGCAGCTTGCGGGCAAAG +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGGGLAG*RSLRAK
Trigger: CTTTGCCCGCAAGCTGCGCCAGCCAGCAAGGCCCCC...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
59% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGTGGACACGGCCGCGTTaGGCAGTGCAGGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGWTRPR*AVQGAQ
Trigger: CTGTGCCCCCTGCACTGCCCAACGCGGCCGTGTCCA...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTATGGACACGGCCGCGTTaGGCAGTGCAGGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLWTRPR*AVQGAQ
Trigger: CTGTGCCCCCTGCACTGCCCAACGCGGCCGTGTCCA...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGAGGCTGGGCAGAGTCTaGCCGCACACGCGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGRLGRV*PHTRRR
Trigger: CCTCCTGCGCGTGTGCGGCCAGACTCTGCCCAGCCT...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCGGAGGAGGTCCGGGGTaGTGTTGGGCAGGACTGGGG +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGGGGPG*CWAGLG
Trigger: CCCCAGTCCTGCCCAACACCACCCCGGACCTCCTCC...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGAGGAGGTCCGGGGTaGTGTTGGGCAGGACTGGGG +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLGGGPG*CWAGLG
Trigger: CCCCAGTCCTGCCCAACACCACCCCGGACCTCCTCC...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCACTCAGCATCAGATTTTaGAGTTCCCTTAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPLSIRF*SSLRVS
Trigger: GGAGACCCTAAGGGAACTCCAAAATCTGATGCTGAG...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGCTCAGCATCAGATTTTaGAGTTCCCTTAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQLSIRF*SSLRVS
Trigger: GGAGACCCTAAGGGAACTCCAAAATCTGATGCTGAG...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCGTGCCAGCGGGTCAGTaGAGAGCCGGGTGGAAGTGG +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGVPAGQ*RAGWKW
Trigger: CCACTTCCACCCGGCTCTTCACTGACCCGCTGGCAC...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCCGCAGGGAGAGTTCCTaGGGAGGGCCCAGTGTGACC +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGRRESS*GGPSVT
Trigger: GGTCACACTGGGCCCTCCTCAGGAACTCTCCCTGCG...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTACGCAGGGAGAGTTCCTaGGGAGGGCCCAGTGTGACC +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLRRESS*GGPSVT
Trigger: GGTCACACTGGGCCCTCCTCAGGAACTCTCCCTGCG...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGTGGACGCAGGGGCCATaGCCCGCCGAGGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVEWTQGP*PAEGSP
Trigger: TGGGGAGCCCTCGGCGGGGCATGGCCCCTGCGTCCA...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCGCCAGCACCCAGGTCTaGGTGCTCCAGGCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGASTQV*VLQAVG
Trigger: GCCTACAGCCTGGAGCACGCAGACCTGGGTGCTGGC...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGCGTGGCCGGCCGCCTaGTCACCATTCAGCGCTTTG +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLAWPAA*SPFSAL
Trigger: CAAAGCGCTGAATGGTGAGCAGGCGGCCGGCCACGC...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGAGGTCTTGCAGGTACTaGTGGCGGGTGCGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGRSCRY*WRVRVA
Trigger: GGCCACGCGCACCCGCCAGCAGTACCTGCAAGACCT...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCGCCGGCTAGGCTCCTaGAGCGACAGCGTGTACAGC +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGRRLGS*SDSVYS
Trigger: GCTGTACACGCTGTCGCTGCAGGAGCCTAGCCGGCG...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCCGCCGGCTAGGCTCCTaGAGCGACAGCGTGTACAGC +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGRRLGS*SDSVYS
Trigger: GCTGTACACGCTGTCGCTGCAGGAGCCTAGCCGGCG...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTACCCTGGACCTCATCCTaGACAGGATCTGGGGCCCCC +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLPWTSS*TGSGAP
Trigger: GGGGGCCCCAGATCCTGTGCAGGATGAGGTCCAGGG...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTACCAGGGTCCCAGAGCTaGCCTCTGAGTGGCTCCCCA +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLPGSQS*PLSGSP
Trigger: TGGGGAGCCACTCAGAGGCCAGCTCTGGGACCCTGG...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGTGGCTCCTCCAGGATaGACACGGCCGCGTTGGGCA +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLVAPPG*TRPRWA
Trigger: TGCCCAACGCGGCCGTGTCCATCCTGGAGGAGCCAC...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGGCGCGTCCTCCGAGATaGTGCCACGGAGTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGARPPR*CHGVSG
Trigger: TCCGGACACTCCGTGGCACCATCTCGGAGGACGCGC...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCGGTCCGGGGTGGTGTTaGGCAGGACTGGGGCCTCAT +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGGPGWC*AGLGPH
Trigger: ATGAGGCCCCAGTCCTGCCCAACACCACCCCGGACC...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGGCAGTTCCTGCCCTCTaGGGCTCCCGCCCAGCCGCC +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVEAVPAL*GSRPAA
Trigger: GGCGGCTGGGCGGGAGCCCCAGAGGGCAGGAACTGC...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534313.6
CDS-3UTR TCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGCAGGTCGGCGGTGGGTaGGCCCAGCTGCTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVEQVGGG*AQLLGG
Trigger: GCCTCCAAGCAGCTGGGCTCACCCACCGCCGACCTG...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCCGGCCCACATGGGCATaGTCTGTGGGCCTGACTCTC +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGRPTWA*SVGLTL
Trigger: GAGAGTCAGGCCCACAGAGCATGCCCATGTGGGCCG...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAAGGCTCTGGTTCCTCTaGTGGCAGCCCCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLRLWFL*WQPQQC
Trigger: GCACTGCTGGGGCTGCCAGCAGAGGAACCAGAGCCT...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCAGGCTCTGGTTCCTCTaGTGGCAGCCCCAGCAGTGC +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGRLWFL*WQPQQC
Trigger: GCACTGCTGGGGCTGCCAGCAGAGGAACCAGAGCCT...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGCCGCCGCAGGCTCACTaGCACCGGGCCCAGCGACTC +
Preference number: 4 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVPPQAH*HRAQRL
Trigger: GAGTCGCTGGGCCCGGTGGCAGTGAGCCTGCGGCGG...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGCCACGGCTCACCAGCTaGAGGCGCGCCACCACCTCG +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVEPRLTS*RRATTS
Trigger: CGAGGTGGTGGCGCGCCTGCAGCTGGTGAGCCGTGG...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGGTGAAGCGCTCCACGTaGGTGACGAATCCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGVKRST*VTNPSA
Trigger: CGCCGAGGGATTCGTCACGCACGTGGAGCGCTTCAC...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTACAGAGCCACTGGGACTaGCTGGCCTGTCCTGGGTCA +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLQSHWD*LACPGS
Trigger: TGACCCAGGACAGGCCAGGCAGTCCCAGTGGCTCTG...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGAGGAGGCGTGTGGCTaGACTCTCAGACTCCGCCTG +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLEEACG*TLRLRL
Trigger: CAGGCGGAGTCTGAGAGTGCAGCCACACGCCTCCTC...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGGAGGAGGCGTGTGGCTaGACTCTCAGACTCCGCCTG +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGEEACG*TLRLRL
Trigger: CAGGCGGAGTCTGAGAGTGCAGCCACACGCCTCCTC...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCGGCCACAAGGACACATaGGTTCCCAGGGAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGGHKDT*VPREAA
Trigger: CGCTGCCTCCCTGGGAACCCATGTGTCCTTGTGGCC...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394224.3
CDS-3UTR CCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTACTCTGGTTCCTCTGCTaGCAGCCCCAGCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLLWFLC*QPQQCQ
Trigger: CTGGCACTGCTGGGGCTGCCAGCAGAGGAACCAGAG...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTATGGGAAGGCAGGCTCTaGTTCCTCTGCTGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLWEGRL*FLCWQP
Trigger: GGGCTGCCAGCAGAGGAACCAGAGCCTGCCTTCCCA...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCGCGTCCGTGGTACCTTaGGTGAAGCTGAGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGASVVP*VKLSPG
Trigger: GCCTGGGCTCAGCTTCACCCAAGGTACCACGGACGC...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGCGCGTGGCCATGGCGTaGAACTGGCGCGCGTGGCCG +
Preference number: 4 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVRVAMA*NWRAWP
Trigger: CGGCCACGCGCGCCAGTTCCACGCCATGGCCACGCG...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTATCTTGCAGGTACTGCTaGCGGGTGCGCGTGGCCATG +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLSCRYC*RVRVAM
Trigger: CATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGA...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGACCTCGCCCACGGCTTaGCCGGGGGACCCGTCGAAG +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVETSPTA*PGDPSK
Trigger: CTTCGACGGGTCCCCCGGCCAAGCCGTGGGCGAGGT...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCCTGATGGCTTGGCTGTaGTGGCCAGGAGGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGLMAWL*WPGGGP
Trigger: CGGACCTCCTCCTGGCCACCACAGCCAAGCCATCAG...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTGCCTGGCCTGTCCTaGGTCAGGGGTGTCTCACTG +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGLPGLS*VRGVSL
Trigger: CAGTGAGACACCCCTGACCCAGGACAGGCCAGGCAG...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTCTCAGCATCAGATTTTaGAGTTCCCTTAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCLSIRF*SSLRVS
Trigger: GGAGACCCTAAGGGAACTCCAAAATCTGATGCTGAG...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGGGGCAGGCCGAAGCGTaGAGCCGAGTCCAGCGACGT +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVEGQAEA*SRVQRR
Trigger: ACGTCGCTGGACTCGGCTTCACGCTTCGGCCTGCCC...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR TCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTACAGAGAGCTGCGTGGTaGCAGCGAGTTCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLQRAAW*QRVLAV
Trigger: CACAGCCAGAACTCGCTGTCACCACGCAGCTCTCTG...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCAGAGAGCTGCGTGGTaGCAGCGAGTTCTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGQRAAW*QRVLAV
Trigger: CACAGCCAGAACTCGCTGTCACCACGCAGCTCTCTG...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCGTCAGCACTGGGTACTaGTGGCTTGGCTGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGVSTGY*WLGCGG
Trigger: GCCACCACAGCCAAGCCATCAGTACCCAGTGCTGAC...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGTCAGCACTGGGTACTaGTGGCTTGGCTGTGGTGGC +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLVSTGY*WLGCGG
Trigger: GCCACCACAGCCAAGCCATCAGTACCCAGTGCTGAC...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGCAGGTCGGCGGTGGGTaGGCCCAGCTGCTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVQVGGG*AQLLGG
Trigger: GCCTCCAAGCAGCTGGGCTCACCCACCGCCGACCTG...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGCTGCATCGCTGCCGCTaGGCAGGAGTGGGCCCCGGA +
Preference number: 4 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVLHRCR*AGVGPG
Trigger: TCCGGGGCCCACTCCTGCGCAGCGGCAGCGATGCAG...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCAGCTGCGGCGCCACGTaGTCCAGAAGTTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGSCGAT*SRSFLG
Trigger: CCCAAGGAAACTTCTGGAGCACGTGGCGCCGCAGCT...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTACCCGGCAGTACAGGATaGCCACCTTGCGTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLPGSTG*PPCVGS
Trigger: GCTTCCAACGCAAGGTGGGCATCCTGTACTGCCGGG...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCCCGGCAGTACAGGATaGCCACCTTGCGTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGPGSTG*PPCVGS
Trigger: GCTTCCAACGCAAGGTGGGCATCCTGTACTGCCGGG...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGGAAGTCGGCGTTGGCTaGGAAGGGGCCTCCGCCAGC +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVEEVGVG*EGASAS
Trigger: GCTGGCGGAGGCCCCTTCGCAGCCAACGCCGACTTC...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCCACAGGTGCAGCAGCTaGTTTGTGGTGGGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGHRCSS*FVVGSR
Trigger: CCTGCTGCCCACCACAAAGCAGCTGCTGCACCTGTG...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTACAGGCCCTGGAGGACTaGCACCATCTTGCAGGCACA +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLQALED*HHLAGT
Trigger: TGTGCCTGCAAGATGGTGGCAGTCCTCCAGGGCCTG...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGGCTCCGGCGCCGGGTTaGCCTTGTCCTCAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVEAPAPG*PCPQSH
Trigger: GTGGCTCTGAGGACAAGGGCAACCCGGCGCCGGAGC...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAATCTCCGAGATGGCCTaGCACTCGTCCTCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLISEMA*HSSSRV
Trigger: GACCCTGGAGGACGAGTGGCAGGCCATCTCGGAGAT...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTCTCAGACTCCGCCTaGAGCCGCCGGTTGTTGTGT +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGLSDSA*SRRLLC
Trigger: ACACAACAACCGGCGGCTGCAGGCGGAGTCTGAGAG...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGGGGGCTGGGCCGCATTaGCGGGCACGGGTGTTTGGT +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVEGAGPH*RARVFG
Trigger: ACCAAACACCCGTGCCCGCCAATGCGGCCCAGCCCC...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCCAAAGAGGTCATCTGTaGACGCAGGGGCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGQRGHL*TQGPCP
Trigger: GGGGCATGGCCCCTGCGTCCACAGATGACCTCTTTG...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCAAAGAGGTCATCTGTaGACGCAGGGGCCATGCCCC +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGQRGHL*TQGPCP
Trigger: GGGGCATGGCCCCTGCGTCCACAGATGACCTCTTTG...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGAAGGCAGGGGTGTCCTaGGTGCGGCTCACGGCCACC +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVEKAGVS*VRLTAT
Trigger: GGTGGCCGTGAGCCGCACCCAGGACACCCCTGCCTT...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGCCCGGAAGTCGGCGTTaGCTGCGAAGGGGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVPGSRR*LRRGLR
Trigger: GCGGAGGCCCCTTCGCAGCCAACGCCGACTTCCGGG...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCCACCATTCAGCGCTTTaGCCAGCAGGAAGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGHHSAL*PAGRPG
Trigger: TCCGGGCCTTCCTGCTGGCCAAAGCGCTGAATGGTG...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCAGCAGGGTCACCCCCTaGACCTCATCCTGCACAGGA +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGSRVTP*TSSCTG
Trigger: TCCTGTGCAGGATGAGGTCCAGGGGGTGACCCTGCT...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCCAGATCCCCAGGCCCTaGAGGACTGCCACCATCTTG +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGQIPRP*RTATIL
Trigger: CAAGATGGTGGCAGTCCTCCAGGGCCTGGGGATCTG...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCAGATCCCCAGGCCCTaGAGGACTGCCACCATCTTG +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGQIPRP*RTATIL
Trigger: CAAGATGGTGGCAGTCCTCCAGGGCCTGGGGATCTG...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGTGTTGGGCAGGACTaGGGCCTCATCCGACAGAGA +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLGVGQD*GLIRQR
Trigger: TCTCTGTCGGATGAGGCCCCAGTCCTGCCCAACACC...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTGTCCTCAGAGCCACTaGGACTGCCTGGCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGCPQSH*DCLACP
Trigger: AGGACAGGCCAGGCAGTCCCAGTGGCTCTGAGGACA...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCCTCCACTCTCTGGGATaGGCTGTCCCTCTCGGGACA +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGLHSLG*AVPLGT
Trigger: TGTCCCGAGAGGGACAGCCCATCCCAGAGAGTGGAG...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTCCACTCTCTGGGATaGGCTGTCCCTCTCGGGACA +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGLHSLG*AVPLGT
Trigger: TGTCCCGAGAGGGACAGCCCATCCCAGAGAGTGGAG...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGAGGGTCTCCACTCTCTaGGATGGGCTGTCCCTCTCG +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGRVSTL*DGLSLS
Trigger: CGAGAGGGACAGCCCATCCCAGAGAGTGGAGACCCT...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGCCTCAGGGGCCCAGGTaGTTCCAGACGGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVEPQGPR*FQTAQA
Trigger: GGCCTGAGCCGTCTGGAACCACCTGGGCCCCTGAGG...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCCAAACAGGGAAGGGGTaGAGGCCACTTCCGCCACCA +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGQTGKG*RPLPPP
Trigger: TGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTG...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGCGTGGTCCGCACGATaGCGCGGTAGCTGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVAWSAR*RGSCAG
Trigger: CCCTGCACAGCTACCGCGTCATCGTGCGGACCACGC...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR TCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGTCAGAGCTAGGATGTaGGCCTGGGTCTGCCCATCT +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLVRARM*AWVCPS
Trigger: AGATGGGCAGACCCAGGCTCACATCCTAGCTCTGAC...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527525.5
CDS-3UTR GCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGCTCGGCTCGAAGGTGTaGGGTGTCAGCGGGGGCCTT +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVELGSKV*GVSGGL
Trigger: AAGGCCCCCGCTGACACCGCACACCTTCGAGCCGAG...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGCCGGGTGGAAGTGGCTaGAGGTCGGCTGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVEPGGSG*RSAGLF
Trigger: GAAGAGGCCAGCCGACCTGCAGCCACTTCCACCCGG...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAACACACAAAGCCAGGTaGCCCATGCAGCAGGTCCGA +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLTHKAR*PMQQVR
Trigger: TCGGACCTGCTGCATGGGGCACCTGGCTTTGTGTGT...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCACACACAAAGCCAGGTaGCCCATGCAGCAGGTCCGA +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGTHKAR*PMQQVR
Trigger: TCGGACCTGCTGCATGGGGCACCTGGCTTTGTGTGT...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGCAGCTGGGGCTCAGCTaGGGCGCCACGTGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVQLGLS*GATCSR
Trigger: TCTGGAGCACGTGGCGCCGCAGCTGAGCCCCAGCTG...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGAGCAAGGTGAGAAACTaGATGAAGGCCGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGSKVRN*MKAGPA
Trigger: GGCGGGACCGGCCTTCATGCAGTTTCTCACCTTGCT...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTACGCTTCCGGAGGAGCTaGTGCTGGTTATTAGGGGTG +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLRFRRS*CWLLGV
Trigger: CACCCCTAATAACCAGCAGCAGCTCCTCCGGAAGCG...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGGTACTGCTGGCGGGTaGGCGTGGCCATGGCGTGGA +
Preference number: 4 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVGTAGG*AWPWRG
Trigger: TCCACGCCATGGCCACGCGCACCCGCCAGCAGTACC...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTATGGTACAGGTCCAGCTaGTGCTCGGAGAAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLWYRSS*CSEKVQ
Trigger: CTGGACCTTCTCCGAGCAGCAGCTGGACCTGTACCA...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGCTAAGACACGCCTCTaGGCAGGGAGAGTTCCTGAG +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLAKTRL*AGRVPE
Trigger: CTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGC...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGAGAGCCGGGTGGAAGTaGCTGCAGGTCGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVERAGWK*LQVGWP
Trigger: AGGCCAGCCGACCTGCAGCCACTTCCACCCGGCTCT...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCAGGCTCAAGCACTGGTaGGAAGGCAGGCTCTGGTTC +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGRLKHW*EGRLWF
Trigger: GAACCAGAGCCTGCCTTCCCACCAGTGCTTGAGCCT...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAATGTCGTTGCCAATGTaGCGCTTCCGGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLMSLPM*RFRRSC
Trigger: GCAGCTCCTCCGGAAGCGCCACATTGGCAACGACAT...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGATGTCGTTGCCAATGTaGCGCTTCCGGAGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGMSLPM*RFRRSC
Trigger: GCAGCTCCTCCGGAAGCGCCACATTGGCAACGACAT...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGTGGGTACTGATGGCTTaGCTGTGGTGGCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGWVLMA*LWWPGG
Trigger: TCCTCCTGGCCACCACAGCCAAGCCATCAGTACCCA...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGAGGCAATCTCCGAGATaGCCTGCCACTCGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGRQSPR*PATRPP
Trigger: TGGAGGACGAGTGGCAGGCCATCTCGGAGATTGCCT...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCAACTCTCAAAGCCTTTaGGCCGCACCACATCGCCCA +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGNSQSL*AAPHRP
Trigger: TGGGCGATGTGGTGCGGCTCAAAGGCTTTGAGAGTT...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGAACTCTCAAAGCCTTTaGGCCGCACCACATCGCCCA +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGNSQSL*AAPHRP
Trigger: TGGGCGATGTGGTGCGGCTCAAAGGCTTTGAGAGTT...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR TCA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGCGCGACAGGCGCAATTaGACACTACGCGGCCGTCGC +
Preference number: 4 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVRDRRN*TLRGRR
Trigger: GCGACGGCCGCGTAGTGTTCAATTGCGCCTGTCGCG...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGAAGCCAGGTGCCCCATaGAGCAGGTCCGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVEKPGAP*SRSELA
Trigger: TGCCAGCTCGGACCTGCTGCATGGGGCACCTGGCTT...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGCCAGCACCCAGGTCTaGGTGCTCCAGGCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVASTQV*VLQAVG
Trigger: GCCTACAGCCTGGAGCACGCAGACCTGGGTGCTGGC...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAACCACTAGGAACACGTaGTGGAAGTGCGAGCGGATG +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLTTRNT*WKCERM
Trigger: CATCCGCTCGCACTTCCAGCACGTGTTCCTAGTGGT...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGACCACTAGGAACACGTaGTGGAAGTGCGAGCGGATG +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGTTRNT*WKCERM
Trigger: CATCCGCTCGCACTTCCAGCACGTGTTCCTAGTGGT...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGGTGAAGCGCTCCACGTaGGTGACGAATCCCTCGGCG +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVEVKRST*VTNPSA
Trigger: CGCCGAGGGATTCGTCACGCACGTGGAGCGCTTCAC...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGCGCCGGCTAGGCTCCTaGAGCGACAGCGTGTACAGC +
Preference number: 4 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVRRLGS*SDSVYS
Trigger: GCTGTACACGCTGTCGCTGCAGGAGCCTAGCCGGCG...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCAGCGAGTTCTGGCTGTaGAGGAACTCAGTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGSEFWL*RNSVLS
Trigger: GGAGAGGACTGAGTTCCTGCACAGCCAGAACTCGCT...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTATGTGGCAGCAGTTCCTaGCCTGGTCTCACTGATGCA +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLCGSSS*PGLTDA
Trigger: TGCATCAGTGAGACCAGGGCAGGAACTGCTGCCACA...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527525.5
CDS-3UTR CCA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGTGGCTGCAGGTCGGCTaGCCTCTTCGTGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVWLQVG*PLRGCG
Trigger: CCCACAGCCACGAAGAGGCCAGCCGACCTGCAGCCA...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGCTCTGGTTCCTCTGCTaGCAGCCCCAGCAGTGCCAG +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVELWFLC*QPQQCQ
Trigger: CTGGCACTGCTGGGGCTGCCAGCAGAGGAACCAGAG...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGTCCGAGCTGGCAGCCTaGTCCTCGGCTGAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVSELAA*SSAEAR
Trigger: CCTGGCTTCAGCCGAGGACCAGGCTGCCAGCTCGGA...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGCGCGTCCTCCGAGATaGTGCCACGGAGTGTCCGGA +
Preference number: 4 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVARPPR*CHGVSG
Trigger: TCCGGACACTCCGTGGCACCATCTCGGAGGACGCGC...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCCTGTGGAATCCGTTTTaGTGTCTAGCTGGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGLWNPF*CLAGPG
Trigger: ACCGGGCCCAGCTAGACACCAAAACGGATTCCACAG...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGCGGCCACCCTGTAGGTaGTGTGTGGCGTGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVRPPCR*CVACRV
Trigger: CACCCTGCACGCCACACACCACCTACAGGGTGGCCG...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCGGTGACAGCGAGTTCTaGCTGTGCAGGAACTCAGTC +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGGDSEF*LCRNSV
Trigger: GACTGAGTTCCTGCACAGCCAGAACTCGCTGTCACC...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCAGAGACAAGGTACGTaGCAGAAAGGAGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGQRQGT*QKGGPQ
Trigger: CTGAGGGCCTCCTTTCTGCCACGTACCTTGTCTCTG...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGCCAGGAGGAGGCGTGTaGCTGCACTCTCAGACTCCG +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVEPGGGV*LHSQTP
Trigger: CGGAGTCTGAGAGTGCAGCCACACGCCTCCTCCTGG...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR TCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGAGCATGGACTCCAAGTaGGAGACCTTCTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGSMDSK*ETFSER
Trigger: CCTCTCAGAGAAGGTCTCTCACTTGGAGTCCATGCT...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGAAGCCAGGTGCCCCATaGAGCAGGTCCGAGCTGGCA +
Preference number: 4 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVKPGAP*SRSELA
Trigger: TGCCAGCTCGGACCTGCTGCATGGGGCACCTGGCTT...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTAGTTCTGATGTTCTTTaGCATAGAAGTATTTGCGGT +
Preference number: 4 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCSSDVL*HRSICG
Trigger: ACCGCAAATACTTCTATGGCAAAGAACATCAGAACT...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGTGGAAGCTCAGCACTTaGTCATCCAGTGTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGWKLST*SSSVSS
Trigger: GCTGCTCACACTGGATGAGCAAGTGCTGAGCTTCCA...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTGGAAGCTCAGCACTTaGTCATCCAGTGTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGWKLST*SSSVSS
Trigger: GCTGCTCACACTGGATGAGCAAGTGCTGAGCTTCCA...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGTGGTCACAATGTCGTTaGCAATGTGGCGCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGWSQCR*QCGASG
Trigger: TCCGGAAGCGCCACATTGGCAACGACATTGTGACCA...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGCTCTCAGACTCCGCCTaGAGCCGCCGGTTGTTGTGT +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVELSDSA*SRRLLC
Trigger: ACACAACAACCGGCGGCTGCAGGCGGAGTCTGAGAG...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGGGGAGTGCGTGCCTGTaGAATCCGTTTTGGTGTCTA +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGGSACL*NPFWCL
Trigger: TAGACACCAAAACGGATTCCACAGGCACGCACTCCC...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
52% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGTGCGTGCCTGTaGAATCCGTTTTGGTGTCTA +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLGSACL*NPFWCL
Trigger: TAGACACCAAAACGGATTCCACAGGCACGCACTCCC...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCGGGAGTGCGTGCCTGTaGAATCCGTTTTGGTGTCTA +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGGSACL*NPFWCL
Trigger: TAGACACCAAAACGGATTCCACAGGCACGCACTCCC...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTTGCTGCCAGGCTCCTaGAACACGATGGTCACAATG +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGLLPGS*NTMVTM
Trigger: CATTGTGACCATCGTGTTCCAGGAGCCTGGCAGCAA...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGGAGGTTCCCAGGCTCTaGCTCAGCATCAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGEVPRL*LSIRFW
Trigger: CCAAAATCTGATGCTGAGCCAGAGCCTGGGAACCTC...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGCAAACAGGGAAGGGGTaGAGGCCACTTCCGCCACCA +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVEQTGKG*RPLPPP
Trigger: TGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTG...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGCCCAGCCTGAGGTTGTaGCAGCAGTTCCTGCCCTCT +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVEPSLRL*QQFLPS
Trigger: AGAGGGCAGGAACTGCTGCCACAACCTCAGGCTGGG...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534313.6
CDS-3UTR TCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGCTTGCTCATCCAGTGTaGGCAGCGTCCGTGGTACCT +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVELAHPV*AASVVP
Trigger: AGGTACCACGGACGCTGCTCACACTGGATGAGCAAG...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGAGCAAGGTGAGAAACTaGATGAAGGCCGGTCCCGCC +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVESKVRN*MKAGPA
Trigger: GGCGGGACCGGCCTTCATGCAGTTTCTCACCTTGCT...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGGCAGAAGGGCTTGCTaGCAGGCTCCTGGAACACGA +
Preference number: 4 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVGRRAC*QAPGTR
Trigger: TCGTGTTCCAGGAGCCTGGCAGCAAGCCCTTCTGCC...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGCTCCTGGAACACGATaGTCACAATGTCGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLAPGTR*SQCRCQ
Trigger: TTGGCAACGACATTGTGACCATCGTGTTCCAGGAGC...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGAGGCAATCTCCGAGATaGCCTGCCACTCGTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVERQSPR*PATRPP
Trigger: TGGAGGACGAGTGGCAGGCCATCTCGGAGATTGCCT...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR TCA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGCTTGCTCATCCAGTGTaGGCAGCGTCCGTGGTACCT +
Preference number: 4 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVLAHPV*AASVVP
Trigger: AGGTACCACGGACGCTGCTCACACTGGATGAGCAAG...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTGCCATAGAAGTATTTaGGGTAGTAGCCAGCACCCA +
Preference number: 4 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGCHRSI*GSSQHP
Trigger: TGGGTGCTGGCTACTACCGCAAATACTTCTATGGCA...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CCA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGCGAGGTTCGGTTCTGTaGCTCCTCCAGGATGGACAC +
Preference number: 4 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVRGSVL*LLQDGH
Trigger: GTGTCCATCCTGGAGGAGCCACAGAACCGAACCTCG...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGTGGTCACCTCGTTGGTaGCCAGGTCTTGCAGGTACT +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVEWSPRW*PGLAGT
Trigger: AGTACCTGCAAGACCTGGCCACCAACGAGGTGACCA...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR TCA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGAACTCTCAAAGCCTTTaGGCCGCACCACATCGCCCA +
Preference number: 4 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVNSQSL*AAPHRP
Trigger: TGGGCGATGTGGTGCGGCTCAAAGGCTTTGAGAGTT...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGTGGTCACAATGTCGTTaGCAATGTGGCGCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVEWSQCR*QCGASG
Trigger: TCCGGAAGCGCCACATTGGCAACGACATTGTGACCA...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGCTGTGGAATCCGTTTTaGTGTCTAGCTGGGCCCGGT +
Preference number: 4 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVLWNPF*CLAGPG
Trigger: ACCGGGCCCAGCTAGACACCAAAACGGATTCCACAG...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGTTGCTGCCAGGCTCCTaGAACACGATGGTCACAATG +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVELLPGS*NTMVTM
Trigger: CATTGTGACCATCGTGTTCCAGGAGCCTGGCAGCAA...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGCAGAGACAAGGTACGTaGCAGAAAGGAGGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVQRQGT*QKGGPQ
Trigger: CTGAGGGCCTCCTTTCTGCCACGTACCTTGTCTCTG...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGGCTCCTGGAACACGATaGTCACAATGTCGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: SLKSSFLHRIFTNREGVEAPGTR*SQCRCQ
Trigger: TTGGCAACGACATTGTGACCATCGTGTTCCAGGAGC...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGGTTCCCAGGCTCTaGCTCAGCATCAGATTTTGG +
Preference number: 4 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVEVPRL*LSIRFW
Trigger: CCAAAATCTGATGCTGAGCCAGAGCCTGGGAACCTC...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CCA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGCTCCTGGAACACGATaGTCACAATGTCGTTGCCAA +
Preference number: 4 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVAPGTR*SQCRCQ
Trigger: TTGGCAACGACATTGTGACCATCGTGTTCCAGGAGC...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR GCA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGAGTTCTGATGTTCTTTaGCATAGAAGTATTTGCGGT +
Preference number: 4 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGSSDVL*HRSICG
Trigger: ACCGCAAATACTTCTATGGCAAAGAACATCAGAACT...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR GCA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGAGTTCTGATGTTCTTTaGCATAGAAGTATTTGCGGT +
Preference number: 4 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVSSDVL*HRSICG
Trigger: ACCGCAAATACTTCTATGGCAAAGAACATCAGAACT...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS CCA 90 bp CCACGGCTCACCAGCTGCAGGCGCGCCACCACCTCGCCCACGGCTTaGCCGGGGGACCCGTCGAAGCGCAGCGTGATCGCCTCCCCGCGG +
Preference number: 5 (lower is better)
Translates to: PRLTSCRRATTSPTA*PGDPSKRSVIASPR
Trigger: CCGCGGGGAGGCGATCACGCTGCGCTTCGACGGGTCCCCCGGCCAAGCCGTGGGCGAGGTGGTGGCGCGCCTGCAGCTGGTGAGCCGTGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS TCA 90 bp CCACCTCGCCCACGGCTTGGCCGGGGGACCCGTCGAAGCGCAGCGTaGTCGCCTCCCCGCGGCCGTGGTACAGGTCCAGCTGCTGCTCGG +
Preference number: 5 (lower is better)
Translates to: PPRPRLGRGTRRSAA*SPPRGRGTGPAAAR
Trigger: CCGAGCAGCAGCTGGACCTGTACCACGGCCGCGGGGAGGCGATCACGCTGCGCTTCGACGGGTCCCCCGGCCAAGCCGTGGGCGAGGTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS GCA 90 bp CCGCTGCGCAGGAGTGGGCCCCGGACTGGCCTCGGCTCGAAGGTGTaGGGTGTCAGCGGGGGCCTTGCTGGCTGGCGCAGCTTGCGGGCA +
Preference number: 5 (lower is better)
Translates to: PLRRSGPRTGLGSKV*GVSGGLAGWRSLRA
Trigger: TGCCCGCAAGCTGCGCCAGCCAGCAAGGCCCCCGCTGACACCGCACACCTTCGAGCCGAGGCCAGTCCGGGGCCCACTCCTGCGCAGCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000533361.1
ENST00000534313.6
CDS CCA 90 bp GGCCTCGCCTGCATCGCTGCCGCTGCGCAGGAGTGGGCCCCGGACTaGCCTCGGCTCGAAGGTGTGCGGTGTCAGCGGGGGCCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: GLACIAAAAQEWAPD*PRLEGVRCQRGPCW
Trigger: CCAGCAAGGCCCCCGCTGACACCGCACACCTTCGAGCCGAGGCCAGTCCGGGGCCCACTCCTGCGCAGCGGCAGCGATGCAGGCGAGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000533361.1
ENST00000534313.6
CDS TCA 90 bp TGCGTGACGAATCCCTCGGCGTCCACCTCGAAGCCCAGGCGGCCTTaGCCGTCGCGGGGCAGCGCCAGCTCGCGGGTCTCGCAGCCACGG +
Preference number: 5 (lower is better)
Translates to: CVTNPSASTSKPRRP*PSRGSASSRVSQPR
Trigger: CCGTGGCTGCGAGACCCGCGAGCTGGCGCTGCCCCGCGACGGTCAAGGCCGCCTGGGCTTCGAGGTGGACGCCGAGGGATTCGTCACGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000531339.5
ENST00000534313.6
CDS TCA 90 bp CCACCTCGCCCACGGCTTGGCCGGGGGACCCGTCGAAGCGCAGCGTaGTCGCCTCCCCGCGGCCGTGGTACAGGTCCAGCTGCTCGTTGG +
Preference number: 5 (lower is better)
Translates to: PPRPRLGRGTRRSAA*SPPRGRGTGPAARW
Trigger: CCAACGAGCAGCTGGACCTGTACCACGGCCGCGGGGAGGCGATCACGCTGCGCTTCGACGGGTCCCCCGGCCAAGCCGTGGGCGAGGTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527525.5
CDS GCA 90 bp GGCGCAGCTTGCGGGCAAAGAGGTCATCTGTGGACGCAGGGGCCATaGCCCGCCGAGGGCTCCCCACACCGCCGGCCCACATGGGCATGC +
Preference number: 5 (lower is better)
Translates to: GAACGQRGHLWTQGP*PAEGSPHRRPTWAC
Trigger: GCATGCCCATGTGGGCCGGCGGTGTGGGGAGCCCTCGGCGGGGCATGGCCCCTGCGTCCACAGATGACCTCTTTGCCCGCAAGCTGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000533361.1
ENST00000534313.6
CDS GCA 90 bp CCGGGCCGCAGCCCCGCCGTCTCGGCGAATGTGAAGCGCTCCACGTaGGTGACGAATCCCTCGGCGTCCACCTCGAAGCCCAGGCGGCCT +
Preference number: 5 (lower is better)
Translates to: PGRSPAVSANVKRST*VTNPSASTSKPRRP
Trigger: AGGCCGCCTGGGCTTCGAGGTGGACGCCGAGGGATTCGTCACGCACGTGGAGCGCTTCACATTCGCCGAGACGGCGGGGCTGCGGCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000531339.5
ENST00000534313.6
CDS GCA 90 bp CCAGCTGCTCGTTGGTGGCCAGGTCTTGCAGGTACTGCTGGCGGGTaGGCGTGGCCATGGCGTGGAACTGGCGCGCGTGGCCGGCCGCCT +
Preference number: 5 (lower is better)
Translates to: PAARWWPGLAGTAGG*AWPWRGTGARGRPP
Trigger: AGGCGGCCGGCCACGCGCGCCAGTTCCACGCCATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGACCTGGCCACCAACGAGCAGCTGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527525.5
CDS CCA 90 bp CCTCGTTGGTGGCCAGGTCTTGCAGGTACTGCTGGCGGGTGCGCGTaGCCATGGCGTGGAACTGGCGCGCGTGGCCGGCCGCCTGCTCAC +
Preference number: 5 (lower is better)
Translates to: PRWWPGLAGTAGGCA*PWRGTGARGRPPAH
Trigger: GTGAGCAGGCGGCCGGCCACGCGCGCCAGTTCCACGCCATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGACCTGGCCACCAACGAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000530226.1
ENST00000534313.6
CDS CCA 90 bp CCGGGGGACCCGTCGAAGCGCAGCGTGATCGCCTCCCCGCGGCCGTaGTACAGGTCCAGCTGCTGCTCGGAGAAGGTCCAGGCCAGCACG +
Preference number: 5 (lower is better)
Translates to: PGDPSKRSVIASPRP*YRSSCCSEKVQAST
Trigger: CGTGCTGGCCTGGACCTTCTCCGAGCAGCAGCTGGACCTGTACCACGGCCGCGGGGAGGCGATCACGCTGCGCTTCGACGGGTCCCCCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS CCA 90 bp GCTCGTTGGTGGCCAGGTCTTGCAGGTACTGCTGGCGGGTGCGCGTaGCCATGGCGTGGAACTGGCGCGCGTGGCCGGCCGCCTGCTCAC +
Preference number: 5 (lower is better)
Translates to: ARWWPGLAGTAGGCA*PWRGTGARGRPPAH
Trigger: GTGAGCAGGCGGCCGGCCACGCGCGCCAGTTCCACGCCATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGACCTGGCCACCAACGAGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527525.5
CDS TCA 90 bp GGGGCCCAGGTGGTTCCAGACGGCTCAGGCCAGGTCGGCGGTGGGTaGGCCCAGCTGCTTGGAGGCCAGGAGGAGGCGTGTGGCTGCACT +
Preference number: 5 (lower is better)
Translates to: GAQVVPDGSGQVGGG*AQLLGGQEEACGCT
Trigger: AGTGCAGCCACACGCCTCCTCCTGGCCTCCAAGCAGCTGGGCTCACCCACCGCCGACCTGGCCTGAGCCGTCTGGAACCACCTGGGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000528699.1
ENST00000534313.6
CDS GCA 90 bp CCCCAGCAGTGCCAGCGGGTCAGTGAAGAGCCGGGTGGAAGTGGCTaGAGGTCGGCTGGCCTCTTCGTGGCTGTGGGCACGGGCACGGGG +
Preference number: 5 (lower is better)
Translates to: PQQCQRVSEEPGGSG*RSAGLFVAVGTGTG
Trigger: CCCCGTGCCCGTGCCCACAGCCACGAAGAGGCCAGCCGACCTGCAGCCACTTCCACCCGGCTCTTCACTGACCCGCTGGCACTGCTGGGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000533361.1
ENST00000534313.6
CDS GCA 90 bp GTGCGCGTGGCCATGGCGTGGAACTGGCGCGCGTGGCCGGCCGCCTaGTCACCATTCAGCGCTTTGGCCAGCAGGAAGGCCCGGAAGTCG +
Preference number: 5 (lower is better)
Translates to: VRVAMAWNWRAWPAA*SPFSALASRKARKS
Trigger: CGACTTCCGGGCCTTCCTGCTGGCCAAAGCGCTGAATGGTGAGCAGGCGGCCGGCCACGCGCGCCAGTTCCACGCCATGGCCACGCGCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000530226.1
ENST00000534313.6
CDS GCA 90 bp TGGTCACCTCGTTGGTGGCCAGGTCTTGCAGGTACTGCTGGCGGGTaGGCGTGGCCATGGCGTGGAACTGGCGCGCGTGGCCGGCCGCCT +
Preference number: 5 (lower is better)
Translates to: WSPRWWPGLAGTAGG*AWPWRGTGARGRPP
Trigger: AGGCGGCCGGCCACGCGCGCCAGTTCCACGCCATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGACCTGGCCACCAACGAGGTGACCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000530226.1
ENST00000534313.6
CDS CCA 90 bp GGAACTGGCGCGCGTGGCCGGCCGCCTGCTCACCATTCAGCGCTTTaGCCAGCAGGAAGGCCCGGAAGTCGGCGTTGGCTGCGAAGGGGC +
Preference number: 5 (lower is better)
Translates to: GTGARGRPPAHHSAL*PAGRPGSRRWLRRG
Trigger: GCCCCTTCGCAGCCAACGCCGACTTCCGGGCCTTCCTGCTGGCCAAAGCGCTGAATGGTGAGCAGGCGGCCGGCCACGCGCGCCAGTTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000530226.1
ENST00000534313.6
CDS CCA 90 bp GCCAGGTCTTGCAGGTACTGCTGGCGGGTGCGCGTGGCCATGGCGTaGAACTGGCGCGCGTGGCCGGCCGCCTGCTCACCATTCAGCGCT +
Preference number: 5 (lower is better)
Translates to: ARSCRYCWRVRVAMA*NWRAWPAACSPFSA
Trigger: AGCGCTGAATGGTGAGCAGGCGGCCGGCCACGCGCGCCAGTTCCACGCCATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGACCTGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000530226.1
ENST00000534313.6
CDS CCA 90 bp CTCAGGGGCCCAGGTGGTTCCAGACGGCTCAGGCCAGGTCGGCGGTaGGTGAGCCCAGCTGCTTGGAGGCCAGGAGGAGGCGTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: LRGPGGSRRLRPGRR*VSPAAWRPGGGVWL
Trigger: CAGCCACACGCCTCCTCCTGGCCTCCAAGCAGCTGGGCTCACCCACCGCCGACCTGGCCTGAGCCGTCTGGAACCACCTGGGCCCCTGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000528699.1
ENST00000534313.6
CDS-3UTR CAA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGGAAGCCCAGGCGGCCTaGACCGTCGCGGGGCAGCGC +
Preference number: 5 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQEAQAA*TVAGQR
Trigger: GCGCTGCCCCGCGACGGTCAAGGCCGCCTGGGCTTC...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS CCA 90 bp GGCCTCGGCTCGAAGGTGTGCGGTGTCAGCGGGGGCCTTGCTGGCTaGCGCAGCTTGCGGGCAAAGAGGTCATCTGTGGACGCAGGGGCC +
Preference number: 5 (lower is better)
Translates to: GLGSKVCGVSGGLAG*RSLRAKRSSVDAGA
Trigger: GGCCCCTGCGTCCACAGATGACCTCTTTGCCCGCAAGCTGCGCCAGCCAGCAAGGCCCCCGCTGACACCGCACACCTTCGAGCCGAGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000533361.1
ENST00000534313.6
CDS CCA 90 bp TACTGCTGGCGGGTGCGCGTGGCCATGGCGTGGAACTGGCGCGCGTaGCCGGCCGCCTGCTCACCATTCAGCGCTTTGGCCAGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: YCWRVRVAMAWNWRA*PAACSPFSALASRK
Trigger: CTTCCTGCTGGCCAAAGCGCTGAATGGTGAGCAGGCGGCCGGCCACGCGCGCCAGTTCCACGCCATGGCCACGCGCACCCGCCAGCAGTA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000530226.1
ENST00000534313.6
CDS CCA 90 bp TCTTGCAGGTACTGCTGGCGGGTGCGCGTGGCCATGGCGTGGAACTaGCGCGCGTGGCCGGCCGCCTGCTCACCATTCAGCGCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: SCRYCWRVRVAMAWN*RAWPAACSPFSALA
Trigger: GGCCAAAGCGCTGAATGGTGAGCAGGCGGCCGGCCACGCGCGCCAGTTCCACGCCATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000530226.1
ENST00000534313.6
CDS CCA 90 bp TGGTGGCCAGGTCTTGCAGGTACTGCTGGCGGGTGCGCGTGGCCATaGCGTGGAACTGGCGCGCGTGGCCGGCCGCCTGCTCACCATTCA +
Preference number: 5 (lower is better)
Translates to: WWPGLAGTAGGCAWP*RGTGARGRPPAHHS
Trigger: TGAATGGTGAGCAGGCGGCCGGCCACGCGCGCCAGTTCCACGCCATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGACCTGGCCACCA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000530226.1
ENST00000534313.6
CDS-3UTR CAA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGGGGGCTGGGCCGCATaGGCGGGCACGGGTGTTTGG +
Preference number: 5 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPGGWAA*AGTGVW
Trigger: CCAAACACCCGTGCCCGCCAATGCGGCCCAGCCCCC...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGCCCGGAAGTCGGCGTaGGCTGCGAAGGGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPARKSA*AAKGPP
Trigger: CGGAGGCCCCTTCGCAGCCAACGCCGACTTCCGGGC...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS TCA 90 bp GCTGCTCGGAGAAGGTCCAGGCCAGCACGTCGCGACAGGCGCAATTaGACACTACGCGGCCGTCGCGCGGCGCCACCAGCACCAGAGCCT +
Preference number: 5 (lower is better)
Translates to: AARRRSRPARRDRRN*TLRGRRAAPPAPEP
Trigger: AGGCTCTGGTGCTGGTGGCGCCGCGCGACGGCCGCGTAGTGTTCAATTGCGCCTGTCGCGACGTGCTGGCCTGGACCTTCTCCGAGCAGC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS GCA 90 bp CCGGACTGGCCTCGGCTCGAAGGTGTGCGGTGTCAGCGGGGGCCTTaGTGGCTGGCGCAGCTTGCGGGCAAAGAGGTCATCTGTGGACGC +
Preference number: 5 (lower is better)
Translates to: PDWPRLEGVRCQRGP*WLAQLAGKEVICGR
Trigger: GCGTCCACAGATGACCTCTTTGCCCGCAAGCTGCGCCAGCCAGCAAGGCCCCCGCTGACACCGCACACCTTCGAGCCGAGGCCAGTCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000533361.1
ENST00000534313.6
CDS GCA 90 bp CGCAGCGTGATCGCCTCCCCGCGGCCGTGGTACAGGTCCAGCTGCTaGTCGGAGAAGGTCCAGGCCAGCACGTCGCGACAGGCGCAATTG +
Preference number: 5 (lower is better)
Translates to: RSVIASPRPWYRSSC*SEKVQASTSRQAQL
Trigger: CAATTGCGCCTGTCGCGACGTGCTGGCCTGGACCTTCTCCGAGCAGCAGCTGGACCTGTACCACGGCCGCGGGGAGGCGATCACGCTGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS GCA 90 bp AAGCGCAGCGTGATCGCCTCCCCGCGGCCGTGGTACAGGTCCAGCTaGTGCTCGGAGAAGGTCCAGGCCAGCACGTCGCGACAGGCGCAA +
Preference number: 5 (lower is better)
Translates to: KRSVIASPRPWYRSS*CSEKVQASTSRQAQ
Trigger: TTGCGCCTGTCGCGACGTGCTGGCCTGGACCTTCTCCGAGCAGCAGCTGGACCTGTACCACGGCCGCGGGGAGGCGATCACGCTGCGCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS CCA 90 bp CCGAGGTTCGGTTCTGTGGCTCCTCCAGGATGGACACGGCCGCGTTaGGCAGTGCAGGGGGCACAGGTGGGGATGCTGGTCCACCCAGGC +
Preference number: 5 (lower is better)
Translates to: PRFGSVAPPGWTRPR*AVQGAQVGMLVHPG
Trigger: GCCTGGGTGGACCAGCATCCCCACCTGTGCCCCCTGCACTGCCCAACGCGGCCGTGTCCATCCTGGAGGAGCCACAGAACCGAACCTCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS CCA 90 bp CACCATTCAGCGCTTTGGCCAGCAGGAAGGCCCGGAAGTCGGCGTTaGCTGCGAAGGGGCCTCCGCCAGCAGGCAGAGCTGGCCCGAAGG +
Preference number: 5 (lower is better)
Translates to: HHSALWPAGRPGSRR*LRRGLRQQAELARR
Trigger: CCTTCGGGCCAGCTCTGCCTGCTGGCGGAGGCCCCTTCGCAGCCAACGCCGACTTCCGGGCCTTCCTGCTGGCCAAAGCGCTGAATGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000530226.1
ENST00000534313.6
CDS CCA 90 bp GACGTAGTGGTCACCTCGTTGGTGGCCAGGTCTTGCAGGTACTGCTaGCGGGTGCGCGTGGCCATGGCGTGGAACTGGCGCGCGTGGCCG +
Preference number: 5 (lower is better)
Translates to: DVVVTSLVARSCRYC*RVRVAMAWNWRAWP
Trigger: CGGCCACGCGCGCCAGTTCCACGCCATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGACCTGGCCACCAACGAGGTGACCACTACGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000530226.1
ENST00000534313.6
CDS CCA 90 bp TACAGGTCCAGCTGCTCGTTGGTGGCCAGGTCTTGCAGGTACTGCTaGCGGGTGCGCGTGGCCATGGCGTGGAACTGGCGCGCGTGGCCG +
Preference number: 5 (lower is better)
Translates to: YRSSCSLVARSCRYC*RVRVAMAWNWRAWP
Trigger: CGGCCACGCGCGCCAGTTCCACGCCATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGACCTGGCCACCAACGAGCAGCTGGACCTGTA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527525.5
CDS CCA 90 bp GAGCTGGAGCCCGGAGGGAAGTTGGGAGGGTGCTGGCGGCGAACGTaGCGAGGACCCCACTCCCATACACATCACCCGGGCCCACGGCTA +
Preference number: 5 (lower is better)
Translates to: ELEPGGKLGGCWRRT*RGPHSHTHHPGPRL
Trigger: TAGCCGTGGGCCCGGGTGATGTGTATGGGAGTGGGGTCCTCGCCACGTTCGCCGCCAGCACCCTCCCAACTTCCCTCCGGGCTCCAGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526137.1
CDS-3UTR CAA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAACGGTGACGCAGACCTaGGGCGCCGAGCGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPTVTQT*GAERRS
Trigger: GCTCCTGCGCTCGGCGCCCAAGGTCTGCGTCACCGT...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS GCA 90 bp AGCGACGTAGTGGTCACCTCGTTGGTGGCCAGGTCTTGCAGGTACTaGTGGCGGGTGCGCGTGGCCATGGCGTGGAACTGGCGCGCGTGG +
Preference number: 5 (lower is better)
Translates to: SDVVVTSLVARSCRY*WRVRVAMAWNWRAW
Trigger: CCACGCGCGCCAGTTCCACGCCATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGACCTGGCCACCAACGAGGTGACCACTACGTCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000530226.1
ENST00000534313.6
CDS GCA 90 bp TGGTACAGGTCCAGCTGCTCGTTGGTGGCCAGGTCTTGCAGGTACTaGTGGCGGGTGCGCGTGGCCATGGCGTGGAACTGGCGCGCGTGG +
Preference number: 5 (lower is better)
Translates to: WYRSSCSLVARSCRY*WRVRVAMAWNWRAW
Trigger: CCACGCGCGCCAGTTCCACGCCATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGACCTGGCCACCAACGAGCAGCTGGACCTGTACCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527525.5
CDS CCA 90 bp ATGGGCATGCTCTGTGGGCCTGACTCTCCGGGGGCTGGGCCGCATTaGCGGGCACGGGTGTTTGGTGCCCAGCCTGAGGTTGTGGCAGCA +
Preference number: 5 (lower is better)
Translates to: MGMLCGPDSPGAGPH*RARVFGAQPEVVAA
Trigger: TGCTGCCACAACCTCAGGCTGGGCACCAAACACCCGTGCCCGCCAATGCGGCCCAGCCCCCGGAGAGTCAGGCCCACAGAGCATGCCCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000394224.3
ENST00000526137.1
ENST00000527525.5
ENST00000533361.1
ENST00000534313.6
CDS CCA 90 bp GACTGGCCTCGGCTCGAAGGTGTGCGGTGTCAGCGGGGGCCTTGCTaGCTGGCGCAGCTTGCGGGCAAAGAGGTCATCTGTGGACGCAGG +
Preference number: 5 (lower is better)
Translates to: DWPRLEGVRCQRGPC*LAQLAGKEVICGRR
Trigger: CCTGCGTCCACAGATGACCTCTTTGCCCGCAAGCTGCGCCAGCCAGCAAGGCCCCCGCTGACACCGCACACCTTCGAGCCGAGGCCAGTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000533361.1
ENST00000534313.6
CDS CCA 90 bp GCTCCAGGCTGTAGGCCGAGGTTCGGTTCTGTGGCTCCTCCAGGATaGACACGGCCGCGTTGGGCAGTGCAGGGGGCACAGGTGGGGATG +
Preference number: 5 (lower is better)
Translates to: APGCRPRFGSVAPPG*TRPRWAVQGAQVGM
Trigger: CATCCCCACCTGTGCCCCCTGCACTGCCCAACGCGGCCGTGTCCATCCTGGAGGAGCCACAGAACCGAACCTCGGCCTACAGCCTGGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS CCA 90 bp ACCCAGGTCTGCGTGCTCCAGGCTGTAGGCCGAGGTTCGGTTCTGTaGCTCCTCCAGGATGGACACGGCCGCGTTGGGCAGTGCAGGGGG +
Preference number: 5 (lower is better)
Translates to: TQVCVLQAVGRGSVL*LLQDGHGRVGQCRG
Trigger: CCCCCTGCACTGCCCAACGCGGCCGTGTCCATCCTGGAGGAGCCACAGAACCGAACCTCGGCCTACAGCCTGGAGCACGCAGACCTGGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGGCGGGCACGGGTGTTaGGTGCCCAGCCTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPGGHGC*VPSLRL
Trigger: CAACCTCAGGCTGGGCACCAAACACCCGTGCCCGCC...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGGTGTCAGCGGGGGCCTaGCTGGCTGGCGCAGCTTGC +
Preference number: 5 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGVSAGA*LAGAAC
Trigger: GCAAGCTGCGCCAGCCAGCAAGGCCCCCGCTGACAC...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
68% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGACGGTGACGCAGACCTaGGGCGCCGAGCGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGTVTQT*GAERRS
Trigger: GCTCCTGCGCTCGGCGCCCAAGGTCTGCGTCACCGT...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS GCA 90 bp GCCGAGTCCAGCGACGTAGTGGTCACCTCGTTGGTGGCCAGGTCTTaGAGGTACTGCTGGCGGGTGCGCGTGGCCATGGCGTGGAACTGG +
Preference number: 5 (lower is better)
Translates to: AESSDVVVTSLVARS*RYCWRVRVAMAWNW
Trigger: CCAGTTCCACGCCATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGACCTGGCCACCAACGAGGTGACCACTACGTCGCTGGACTCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000530226.1
ENST00000534313.6
CDS GCA 90 bp ACAAGGTACGTGGCAGAAAGGAGGCCCTCAGCTCCGGCGCCGGGTTaGCCTTGTCCTCAGAGCCACTGGGACTGCCTGGCCTGTCCTGGG +
Preference number: 5 (lower is better)
Translates to: TRYVAERRPSAPAPG*PCPQSHWDCLACPG
Trigger: CCCAGGACAGGCCAGGCAGTCCCAGTGGCTCTGAGGACAAGGGCAACCCGGCGCCGGAGCTGAGGGCCTCCTTTCTGCCACGTACCTTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000531339.5
ENST00000534313.6
CDS GCA 90 bp TTGGAGGCCAGGAGGAGGCGTGTGGCTGCACTCTCAGACTCCGCCTaGAGCCGCCGGTTGTTGTGTCTCAGGCTCCGCACCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LEARRRRVAALSDSA*SRRLLCLRLRTSSS
Trigger: GGAGGAGGAGGTGCGGAGCCTGAGACACAACAACCGGCGGCTGCAGGCGGAGTCTGAGAGTGCAGCCACACGCCTCCTCCTGGCCTCCAA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000528699.1
ENST00000534313.6
CDS CCA 90 bp CGAGCTCACACACAAAGCCAGGTGCCCCATGCAGCAGGTCCGAGCTaGCAGCCTGGTCCTCGGCTGAAGCCAGGGTCCCAGAGCTGGCCT +
Preference number: 5 (lower is better)
Translates to: RAHTQSQVPHAAGPS*QPGPRLKPGSQSWP
Trigger: AGGCCAGCTCTGGGACCCTGGCTTCAGCCGAGGACCAGGCTGCCAGCTCGGACCTGCTGCATGGGGCACCTGGCTTTGTGTGTGAGCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGATGGACACGGCCGCGTaGGGCAGTGCAGGGGGCACA +
Preference number: 5 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGMDTAA*GSAGGT
Trigger: TGTGCCCCCTGCACTGCCCAACGCGGCCGTGTCCAT...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGGGCGCCGGGTTGCCCTaGTCCTCAGAGCCACTGGGA +
Preference number: 5 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGGAGLP*SSEPLG
Trigger: TCCCAGTGGCTCTGAGGACAAGGGCAACCCGGCGCC...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
67% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS GCA 90 bp GGCCCTGGAGGACTGCCACCATCTTGCAGGCACAGGTGCAGCAGCTaGTTTGTGGTGGGCAGCAGGGTCACCCCCTGGACCTCATCCTGC +
Preference number: 5 (lower is better)
Translates to: GPGGLPPSCRHRCSS*FVVGSRVTPWTSSC
Trigger: GCAGGATGAGGTCCAGGGGGTGACCCTGCTGCCCACCACAAAGCAGCTGCTGCACCTGTGCCTGCAAGATGGTGGCAGTCCTCCAGGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS CCA 90 bp CTGATGGCTTGGCTGTGGTGGCCAGGAGGAGGTCCGGGGTGGTGTTaGGCAGGACTGGGGCCTCATCCGACAGAGAGCTGCGTGGTGACA +
Preference number: 5 (lower is better)
Translates to: LMAWLWWPGGGPGWC*AGLGPHPTESCVVT
Trigger: TGTCACCACGCAGCTCTCTGTCGGATGAGGCCCCAGTCCTGCCCAACACCACCCCGGACCTCCTCCTGGCCACCACAGCCAAGCCATCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS CCA 90 bp TGGGTACTGATGGCTTGGCTGTGGTGGCCAGGAGGAGGTCCGGGGTaGTGTTGGGCAGGACTGGGGCCTCATCCGACAGAGAGCTGCGTG +
Preference number: 5 (lower is better)
Translates to: WVLMAWLWWPGGGPG*CWAGLGPHPTESCV
Trigger: CACGCAGCTCTCTGTCGGATGAGGCCCCAGTCCTGCCCAACACCACCCCGGACCTCCTCCTGGCCACCACAGCCAAGCCATCAGTACCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTGGCGGGCACGGGTGTTaGGTGCCCAGCCTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCGGHGC*VPSLRL
Trigger: CAACCTCAGGCTGGGCACCAAACACCCGTGCCCGCC...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGCTGGCTGGCGCAGCTaGCGGGCAAAGAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPAGWRS*RAKRSS
Trigger: AGATGACCTCTTTGCCCGCAAGCTGCGCCAGCCAGC...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGGCTCCAGAAGTTTCCTaGGGGACAGACCCCGTGGGG +
Preference number: 5 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQAPEVS*GTDPVG
Trigger: CCCCACGGGGTCTGTCCCCAAGGAAACTTCTGGAGC...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGAGCGTCCGTGGTACCTaGGGTGAAGCTGAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQSVRGT*GEAEPR
Trigger: CCTGGGCTCAGCTTCACCCAAGGTACCACGGACGCT...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTTGGTGGCCAGGTCTaGCAGGTACTGCTGGCGGGT +
Preference number: 5 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPVGGQV*QVLLAG
Trigger: ACCCGCCAGCAGTACCTGCAAGACCTGGCCACCAAC...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCACTGGGTACTGATGGCTaGGCTGTGGTGGCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPLGTDG*AVVARR
Trigger: CCTCCTGGCCACCACAGCCAAGCCATCAGTACCCAG...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTAGCTCCGGCGCCGGGTaGCCCTTGTCCTCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCSSGAG*PLSSEP
Trigger: TGGCTCTGAGGACAAGGGCAACCCGGCGCCGGAGCT...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTGCCTGCAGCCGCCGGTaGTTGTGTCTCAGGCTCCGC +
Preference number: 5 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCACSRR*LCLRLR
Trigger: GCGGAGCCTGAGACACAACAACCGGCGGCTGCAGGC...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS CCA 90 bp GCTGGACATATTGACTCGGGACTGAGCTGGAGCCCGGAGGGAAGTTaGGAGGGTGCTGGCGGCGAACGTGGCGAGGACCCCACTCCCATA +
Preference number: 5 (lower is better)
Translates to: AGHIDSGLSWSPEGS*EGAGGERGEDPTPI
Trigger: TATGGGAGTGGGGTCCTCGCCACGTTCGCCGCCAGCACCCTCCCAACTTCCCTCCGGGCTCCAGCTCAGTCCCGAGTCAATATGTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526137.1
CDS-3UTR CAA 90 bp GGGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAAGGACTGCCACCATCTaGCAGGCACAGGTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: GGSAKTRLCAGRVPEEGPRTATI*QAQVQQ
Trigger: CTGCTGCACCTGTGCCTGCAAGATGGTGGCAGTCCT...TGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTTGCAGCCGCCGGTTGTaGTGTCTCAGGCTCCGCACC +
Preference number: 5 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCCSRRL*CLRLRT
Trigger: GGTGCGGAGCCTGAGACACAACAACCGGCGGCTGCA...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS TCA 90 bp TGGCCTGTCCTGGGTCAGGGGTGTCTCACTGTCAGCACTGGGTACTaGTGGCTTGGCTGTGGTGGCCAGGAGGAGGTCCGGGGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: WPVLGQGCLTVSTGY*WLGCGGQEEVRGGV
Trigger: AACACCACCCCGGACCTCCTCCTGGCCACCACAGCCAAGCCATCAGTACCCAGTGCTGACAGTGAGACACCCCTGACCCAGGACAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000531339.5
ENST00000534313.6
CDS TCA 90 bp CTCACTGCCACCGGGCCCAGCGACTCGTCCATCCCGAAGAAGTTCTaGTGTTCTGGGGGACCGCGCCGAAGAAAACGATTGGTCCCGCCC +
Preference number: 5 (lower is better)
Translates to: LTATGPSDSSIPKKF*CSGGPRRRKRLVPP
Trigger: GGGCGGGACCAATCGTTTTCTTCGGCGCGGTCCCCCAGAACATCAGAACTTCTTCGGGATGGACGAGTCGCTGGGCCCGGTGGCAGTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534406.1
CDS GCA 90 bp GGAACTCAGTCCTCTCCTCGGCCAGATCCCCAGGCCCTGGAGGACTaGCACCATCTTGCAGGCACAGGTGCAGCAGCTGCTTTGTGGTGG +
Preference number: 5 (lower is better)
Translates to: GTQSSPRPDPQALED*HHLAGTGAAAALWW
Trigger: CCACCACAAAGCAGCTGCTGCACCTGTGCCTGCAAGATGGTGGCAGTCCTCCAGGGCCTGGGGATCTGGCCGAGGAGAGGACTGAGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS GCA 90 bp GCCTCATCCGACAGAGAGCTGCGTGGTGACAGCGAGTTCTGGCTGTaGAGGAACTCAGTCCTCTCCTCGGCCAGATCCCCAGGCCCTGGA +
Preference number: 5 (lower is better)
Translates to: ASSDRELRGDSEFWL*RNSVLSSARSPGPG
Trigger: TCCAGGGCCTGGGGATCTGGCCGAGGAGAGGACTGAGTTCCTGCACAGCCAGAACTCGCTGTCACCACGCAGCTCTCTGTCGGATGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS CCA 90 bp GCTGTGCAGGAACTCAGTCCTCTCCTCGGCCAGATCCCCAGGCCCTaGAGGACTGCCACCATCTTGCAGGCACAGGTGCAGCAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: AVQELSPLLGQIPRP*RTATILQAQVQQLL
Trigger: AAGCAGCTGCTGCACCTGTGCCTGCAAGATGGTGGCAGTCCTCCAGGGCCTGGGGATCTGGCCGAGGAGAGGACTGAGTTCCTGCACAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS CCA 90 bp AGGCCCTCAGCTCCGGCGCCGGGTTGCCCTTGTCCTCAGAGCCACTaGGACTGCCTGGCCTGTCCTGTGCCACAGAAGTGGATACAGATT +
Preference number: 5 (lower is better)
Translates to: RPSAPAPGCPCPQSH*DCLACPVPQKWIQI
Trigger: AATCTGTATCCACTTCTGTGGCACAGGACAGGCCAGGCAGTCCCAGTGGCTCTGAGGACAAGGGCAACCCGGCGCCGGAGCTGAGGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529725.1
CDS CCA 90 bp CACCGGGCCCAGCGACTCGTCCATCCCGAAGAAGTTCTGATGTTCTaGGGGACCGCGCCGAAGAAAACGATTGGTCCCGCCCTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: HRAQRLVHPEEVLMF*GTAPKKTIGPALWQ
Trigger: CTGCCAGAGGGCGGGACCAATCGTTTTCTTCGGCGCGGTCCCCCAGAACATCAGAACTTCTTCGGGATGGACGAGTCGCTGGGCCCGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534406.1
CDS-3UTR CAA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTGCTCCAGAAGTTTCCTaGGGGACAGACCCCGTGGGG +
Preference number: 5 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCAPEVS*GTDPVG
Trigger: CCCCACGGGGTCTGTCCCCAAGGAAACTTCTGGAGC...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTAGCGTCCGTGGTACCTaGGGTGAAGCTGAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCSVRGT*GEAEPR
Trigger: CCTGGGCTCAGCTTCACCCAAGGTACCACGGACGCT...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGGATGCCCACCTTGCGTaGGAAGCTCAGCACTTGCTC +
Preference number: 5 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQDAHLA*EAQHLL
Trigger: GAGCAAGTGCTGAGCTTCCAACGCAAGGTGGGCATC...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTTCACCATTCAGCGCTTaGGCCAGCAGGAAGGCCCGG +
Preference number: 5 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCSPFSA*ASRKAR
Trigger: CCGGGCCTTCCTGCTGGCCAAAGCGCTGAATGGTGA...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp ACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGGGAGGGGGAGGACTGCCACCATCTaGCAGGCACAGGTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: TGKGWRPLPPPNKGLGRGRTATI*QAQVQQ
Trigger: CTGCTGCACCTGTGCCTGCAAGATGGTGGCAGTCCT...CCCCCTCCCTAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTCTGGGTACTGATGGCTaGGCTGTGGTGGCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCLGTDG*AVVARR
Trigger: CCTCCTGGCCACCACAGCCAAGCCATCAGTACCCAG...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTAGGTCCAGCTGCTCGTaGGTGGCCAGGTCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCRSSCS*VARSCR
Trigger: CCTGCAAGACCTGGCCACCAACGAGCAGCTGGACCT...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527525.5
CDS CCA 90 bp GAGGACTGCCACCATCTTGCAGGCACAGGTGCAGCAGCTGCTTTGTaGTGGGCAGCAGGGTCACCCCCTGGACCTCATCCTGCACAGGAT +
Preference number: 5 (lower is better)
Translates to: EDCHHLAGTGAAAAL*WAAGSPPGPHPAQD
Trigger: ATCCTGTGCAGGATGAGGTCCAGGGGGTGACCCTGCTGCCCACCACAAAGCAGCTGCTGCACCTGTGCCTGCAAGATGGTGGCAGTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS CCA 90 bp CTCCGACATGATCCTGCTGATGGAGTTCCGCAGAGACAAGGTACGTaGCAGAAAGGAGGCCCTCAGCTCCGGCGCCGGGTTGCCCTTGTC +
Preference number: 5 (lower is better)
Translates to: LRHDPADGVPQRQGT*QKGGPQLRRRVALV
Trigger: GACAAGGGCAACCCGGCGCCGGAGCTGAGGGCCTCCTTTCTGCCACGTACCTTGTCTCTGCGGAACTCCATCAGCAGGATCATGTCGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000529725.1
ENST00000531339.5
ENST00000534313.6
CDS-3UTR CAA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGAAGCCCAGGCGGCCTaGACCGTCGCGGGGCAGCGC +
Preference number: 5 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLEAQAA*TVAGQR
Trigger: GCGCTGCCCCGCGACGGTCAAGGCCGCCTGGGCTTC...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS CCA 90 bp CAGGCTTTGCACGTCATAGTGGGCAAACCATCGAGGCTCAAGCACTaGTGGGAAGGCAGGCTCTGGTTCCTCTGCTGGCAGCCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: QALHVIVGKPSRLKH*WEGRLWFLCWQPQQ
Trigger: CTGCTGGGGCTGCCAGCAGAGGAACCAGAGCCTGCCTTCCCACCAGTGCTTGAGCCTCGATGGTTTGCCCACTATGACGTGCAAAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGGGGGGCTGGGCCGCATaGGCGGGCACGGGTGTTTGG +
Preference number: 5 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGGGWAA*AGTGVW
Trigger: CCAAACACCCGTGCCCGCCAATGCGGCCCAGCCCCC...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
61% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTGATGCCCACCTTGCGTaGGAAGCTCAGCACTTGCTC +
Preference number: 5 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCDAHLA*EAQHLL
Trigger: GAGCAAGTGCTGAGCTTCCAACGCAAGGTGGGCATC...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCGCCCGGAAGTCGGCGTaGGCTGCGAAGGGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGARKSA*AAKGPP
Trigger: CGGAGGCCCCTTCGCAGCCAACGCCGACTTCCGGGC...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGCCCGGAAGTCGGCGTaGGCTGCGAAGGGGCCTCCG +
Preference number: 5 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLARKSA*AAKGPP
Trigger: CGGAGGCCCCTTCGCAGCCAACGCCGACTTCCGGGC...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCCACCTCGCCCACGGCTaGGCCGGGGGACCCGTCGAA +
Preference number: 5 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGHLAHG*AGGPVE
Trigger: TTCGACGGGTCCCCCGGCCAAGCCGTGGGCGAGGTG...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTACACCTCGCCCACGGCTaGGCCGGGGGACCCGTCGAA +
Preference number: 5 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLHLAHG*AGGPVE
Trigger: TTCGACGGGTCCCCCGGCCAAGCCGTGGGCGAGGTG...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS GCA 90 bp GACTCCAGAATGGTGTTGCAAGTAGAGGCAATCTCCGAGATGGCCTaGCACTCGTCCTCCAGGGTCCCACTGCCCGCCTCCGACATGATC +
Preference number: 5 (lower is better)
Translates to: DSRMVLQVEAISEMA*HSSSRVPLPASDMI
Trigger: GATCATGTCGGAGGCGGGCAGTGGGACCCTGGAGGACGAGTGGCAGGCCATCTCGGAGATTGCCTCTACTTGCAACACCATTCTGGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000529725.1
ENST00000531339.5
ENST00000534313.6
CDS-3UTR CAA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGTGTCAGCGGGGGCCTaGCTGGCTGGCGCAGCTTGC +
Preference number: 5 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLVSAGA*LAGAAC
Trigger: GCAAGCTGCGCCAGCCAGCAAGGCCCCCGCTGACAC...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCGTGTCAGCGGGGGCCTaGCTGGCTGGCGCAGCTTGC +
Preference number: 5 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGVSAGA*LAGAAC
Trigger: GCAAGCTGCGCCAGCCAGCAAGGCCCCCGCTGACAC...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTTACAGGATGCCCACCTaGCGTTGGAAGCTCAGCACT +
Preference number: 5 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCYRMPT*RWKLST
Trigger: AGTGCTGAGCTTCCAACGCAAGGTGGGCATCCTGTA...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp GGGGCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGGACTCCAGAATGGTGTaGCAAGTAGAGGCAATCTCC +
Preference number: 5 (lower is better)
Translates to: GAVLRHASAQGEFLRRAQDSRMV*QVEAIS
Trigger: GGAGATTGCCTCTACTTGCAACACCATTCTGGAGTC...CTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS TCA 90 bp ACTCCAAGTGAGAGACCTTCTCTGAGAGGTTCCCAGGCTCTGGCCTaGAGACATGGGGGTCAAGACTCAGCAGGACCAAGGCAGGGGGCA +
Preference number: 5 (lower is better)
Translates to: TPSERPSLRGSQALA*RHGGQDSAGPRQGA
Trigger: TGCCCCCTGCCTTGGTCCTGCTGAGTCTTGACCCCCATGTCTTCAGGCCAGAGCCTGGGAACCTCTCAGAGAAGGTCTCTCACTTGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528699.1
CDS-3UTR CAA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAATGGACACGGCCGCGTaGGGCAGTGCAGGGGGCACA +
Preference number: 5 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLMDTAA*GSAGGT
Trigger: TGTGCCCCCTGCACTGCCCAACGCGGCCGTGTCCAT...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGGGCGCCGGGTTGCCCTaGTCCTCAGAGCCACTGGGA +
Preference number: 5 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGGAGLP*SSEPLG
Trigger: TCCCAGTGGCTCTGAGGACAAGGGCAACCCGGCGCC...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCGGCGCCGGGTTGCCCTaGTCCTCAGAGCCACTGGGA +
Preference number: 5 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGGAGLP*SSEPLG
Trigger: TCCCAGTGGCTCTGAGGACAAGGGCAACCCGGCGCC...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGAGCTCCGGCGCCGGGTaGCCCTTGTCCTCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGSSGAG*PLSSEP
Trigger: TGGCTCTGAGGACAAGGGCAACCCGGCGCCGGAGCT...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGGCCTGCAGCCGCCGGTaGTTGTGTCTCAGGCTCCGC +
Preference number: 5 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGACSRR*LCLRLR
Trigger: GCGGAGCCTGAGACACAACAACCGGCGGCTGCAGGC...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS TCA 90 bp GGCAGCAGTTCCTGCCCTGGTCTCACTGATGCAGACAGGGAGGTCTaGACCCCATGTGACAGATGGTCAGATGAGGTCCAGAGGAGATGC +
Preference number: 5 (lower is better)
Translates to: GSSSCPGLTDADREV*TPCDRWSDEVQRRC
Trigger: GCATCTCCTCTGGACCTCATCTGACCATCTGTCACATGGGGTTCAGACCTCCCTGTCTGCATCAGTGAGACCAGGGCAGGAACTGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527525.5
CDS-3UTR CAA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGTGCAGCCGCCGGTTGTaGTGTCTCAGGCTCCGCACC +
Preference number: 5 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGCSRRL*CLRLRT
Trigger: GGTGCGGAGCCTGAGACACAACAACCGGCGGCTGCA...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS GCA 90 bp TTCTTTGCCATAGAAGTATTTGCGGTAGTAGCCAGCACCCAGGTCTaGGTGCTCCAGGCTGTAGGCCGAGGTTCGGTTCTGTGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: FFAIEVFAVVASTQV*VLQAVGRGSVLWLL
Trigger: GAGGAGCCACAGAACCGAACCTCGGCCTACAGCCTGGAGCACGCAGACCTGGGTGCTGGCTACTACCGCAAATACTTCTATGGCAAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGGCTGGCTGGCGCAGCTaGCGGGCAAAGAGGTCATCT +
Preference number: 5 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGAGWRS*RAKRSS
Trigger: AGATGACCTCTTTGCCCGCAAGCTGCGCCAGCCAGC...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp GCAGTGCTAAGACACGCCTCTGCGCAGGGAGAGTTCCTGAGGAGGGCCCAGTGTATCAAAGAGCAGGCTTaGCACGTCATAGTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: AVLRHASAQGEFLRRAQCIKEQA*HVIVGK
Trigger: TTTGCCCACTATGACGTGCAAAGCCTGCTCTTTGAT...ACACTGGGCCCTCCTCAGGAACTCTCCCTGCGCAGAGGCGTGTCTTAGCACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTAGCTCCAGAAGTTTCCTaGGGGACAGACCCCGTGGGG +
Preference number: 5 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLAPEVS*GTDPVG
Trigger: CCCCACGGGGTCTGTCCCCAAGGAAACTTCTGGAGC...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCAGCGTCCGTGGTACCTaGGGTGAAGCTGAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGSVRGT*GEAEPR
Trigger: CCTGGGCTCAGCTTCACCCAAGGTACCACGGACGCT...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTCACCATTCAGCGCTTaGGCCAGCAGGAAGGCCCGG +
Preference number: 5 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGSPFSA*ASRKAR
Trigger: CCGGGCCTTCCTGCTGGCCAAAGCGCTGAATGGTGA...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCGTTGGTGGCCAGGTCTaGCAGGTACTGCTGGCGGGT +
Preference number: 5 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGVGGQV*QVLLAG
Trigger: ACCCGCCAGCAGTACCTGCAAGACCTGGCCACCAAC...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTATCGCGACAGGCGCAATaGAACACTACGCGGCCGTCG +
Preference number: 5 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLSRQAQ*NTTRPS
Trigger: CGACGGCCGCGTAGTGTTCAATTGCGCCTGTCGCGA...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CAA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTCGCGACAGGCGCAATaGAACACTACGCGGCCGTCG +
Preference number: 5 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGSRQAQ*NTTRPS
Trigger: CGACGGCCGCGTAGTGTTCAATTGCGCCTGTCGCGA...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CAA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTGGGTACTGATGGCTaGGCTGTGGTGGCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGLGTDG*AVVARR
Trigger: CCTCCTGGCCACCACAGCCAAGCCATCAGTACCCAG...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGGGCGGGCACGGGTGTTaGGTGCCCAGCCTGAGGTTG +
Preference number: 5 (lower is better)
Translates to: SLKSSFLHRIFTNREGVEGGHGC*VPSLRL
Trigger: CAACCTCAGGCTGGGCACCAAACACCCGTGCCCGCC...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CAA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGATGGACACGGCCGCGTaGGGCAGTGCAGGGGGCACA +
Preference number: 5 (lower is better)
Translates to: SLKSSFLHRIFTNREGVEMDTAA*GSAGGT
Trigger: TGTGCCCCCTGCACTGCCCAACGCGGCCGTGTCCAT...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CAA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCCTGTGGAATCCGTTTaGGTGTCTAGCTGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGPVESV*VSSWAR
Trigger: CCGGGCCCAGCTAGACACCAAAACGGATTCCACAGG...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCCCTGTGGAATCCGTTTaGGTGTCTAGCTGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGPVESV*VSSWAR
Trigger: CCGGGCCCAGCTAGACACCAAAACGGATTCCACAGG...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCGTAGTGGTCACCTCGTaGGTGGCCAGGTCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGVVVTS*VARSCR
Trigger: CCTGCAAGACCTGGCCACCAACGAGGTGACCACTAC...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CAA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGACGGTGACGCAGACCTaGGGCGCCGAGCGCAGGAGC +
Preference number: 5 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVTVTQT*GAERRS
Trigger: GCTCCTGCGCTCGGCGCCCAAGGTCTGCGTCACCGT...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CAA 90 bp GAATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGGATGCCCACCTTGCGTaGGAAGCTCAGCACTTGCTC +
Preference number: 5 (lower is better)
Translates to: EYLQTGKGWRPLPPPNKGDAHLA*EAQHLL
Trigger: GAGCAAGTGCTGAGCTTCCAACGCAAGGTGGGCATC...CCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGAGCTCCGGCGCCGGGTaGCCCTTGTCCTCAGAGCCA +
Preference number: 5 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVSSGAG*PLSSEP
Trigger: TGGCTCTGAGGACAAGGGCAACCCGGCGCCGGAGCT...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CAA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGCCTGCAGCCGCCGGTaGTTGTGTCTCAGGCTCCGC +
Preference number: 5 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVACSRR*LCLRLR
Trigger: GCGGAGCCTGAGACACAACAACCGGCGGCTGCAGGC...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CAA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTACAGGATGCCCACCTaGCGTTGGAAGCTCAGCACT +
Preference number: 5 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGYRMPT*RWKLST
Trigger: AGTGCTGAGCTTCCAACGCAAGGTGGGCATCCTGTA...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp TATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCTATACAGGATGCCCACCTaGCGTTGGAAGCTCAGCACT +
Preference number: 5 (lower is better)
Translates to: YLQTGKGWRPLPPPNKGLYRMPT*RWKLST
Trigger: AGTGCTGAGCTTCCAACGCAAGGTGGGCATCCTGTA...TAGCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGTCACCATTCAGCGCTTaGGCCAGCAGGAAGGCCCGG +
Preference number: 5 (lower is better)
Translates to: SLKSSFLHRIFTNREGVESPFSA*ASRKAR
Trigger: CCGGGCCTTCCTGCTGGCCAAAGCGCTGAATGGTGA...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CAA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGCCTGTGGAATCCGTTTaGGTGTCTAGCTGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: SLKSSFLHRIFTNREGVEPVESV*VSSWAR
Trigger: CCGGGCCCAGCTAGACACCAAAACGGATTCCACAGG...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CAA 90 bp TCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGAGAGGACTGCCACCATCTaGCAGGCACAGGTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: SLKSSFLHRIFTNREGVERTATI*QAQVQQ
Trigger: CTGCTGCACCTGTGCCTGCAAGATGGTGGCAGTCCT...CTCCACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CAA 90 bp TACTCCCTGAAGTCCTCTTTTCTCCACAGAATATTTACAAACAGGGAAGGGGTGGTAGTGGTCACCTCGTaGGTGGCCAGGTCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: YSLKSSFLHRIFTNREGVVVVTS*VARSCR
Trigger: CCTGCAAGACCTGGCCACCAACGAGGTGACCACTAC...CACCCCTTCCCTGTTTGTAAATATTCTGTGGAGAAAAGAGGACTTCAGGGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS-3UTR CAA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCGACTCCAGAATGGTGTaGCAAGTAGAGGCAATCTCC +
Preference number: 5 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGDSRMV*QVEAIS
Trigger: GGAGATTGCCTCTACTTGCAACACCATTCTGGAGTC...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS-3UTR CAA 90 bp AATATTTACAAACAGGGAAGGGGTGGAGGCCACTTCCGCCACCAAATAAGGGGCATCAAAGAGCAGGCTTaGCACGTCATAGTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: NIYKQGRGGGHFRHQIRGIKEQA*HVIVGK
Trigger: TTTGCCCACTATGACGTGCAAAGCCTGCTCTTTGAT...GCCCCTTATTTGGTGGCGGAAGTGGCCTCCACCCCTTCCCTGTTTGTAAATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS CCA 72 bp AGCGCAGGAGCTGGGCAGCGGCCTCGGGCCGGAGGCTaGGCAGAGTCTGGCCGCACACGCGCAGGAGGCGCG +
Preference number: 6 (lower is better)
Translates to: SAGAGQRPRAGG*AESGRTRAGGA
Trigger: CGCGCCTCCTGCGCGTGTGCGGCCAGACTCTGCCCAGCCTCCGGCCCGAGGCCGCTGCCCAGCTCCTGCGCT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000531339.5
ENST00000534313.6
CDS CAA 90 bp GCCACGGCTCACCAGCTGCAGGCGCGCCACCACCTCGCCCACGGCTaGGCCGGGGGACCCGTCGAAGCGCAGCGTGATCGCCTCCCCGCG +
Preference number: 6 (lower is better)
Translates to: ATAHQLQARHHLAHG*AGGPVEAQRDRLPA
Trigger: CGCGGGGAGGCGATCACGCTGCGCTTCGACGGGTCCCCCGGCCAAGCCGTGGGCGAGGTGGTGGCGCGCCTGCAGCTGGTGAGCCGTGGC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS GCA 72 bp GCCGAGGGCTCCCCACACCGCCGGCCCACATGGGCATaGTCTGTGGGCCTGACTCTCCGGGGGCTGGGCCGC +
Preference number: 6 (lower is better)
Translates to: AEGSPHRRPTWA*SVGLTLRGLGR
Trigger: GCGGCCCAGCCCCCGGAGAGTCAGGCCCACAGAGCATGCCCATGTGGGCCGGCGGTGTGGGGAGCCCTCGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000533361.1
ENST00000534313.6
CDS CCA 72 bp CCCGTGGGGGCCCCGGCGGCAGCGCGTCCTCCGAGATaGTGCCACGGAGTGTCCGGAGCTGCGTGGTCCGCA +
Preference number: 6 (lower is better)
Translates to: PVGAPAAARPPR*CHGVSGAAWSA
Trigger: TGCGGACCACGCAGCTCCGGACACTCCGTGGCACCATCTCGGAGGACGCGCTGCCGCCGGGGCCCCCACGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
ENST00000534406.1
CDS GCA 72 bp GTGGGGGCCCCGGCGGCAGCGCGTCCTCCGAGATGGTaGCACGGAGTGTCCGGAGCTGCGTGGTCCGCACGA +
Preference number: 6 (lower is better)
Translates to: VGAPAAARPPRW*HGVSGAAWSAR
Trigger: TCGTGCGGACCACGCAGCTCCGGACACTCCGTGGCACCATCTCGGAGGACGCGCTGCCGCCGGGGCCCCCAC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
ENST00000534406.1
CDS CCA 72 bp CCTGGCCTCGCCTGCATCGCTGCCGCTGCGCAGGAGTaGGCCCCGGACTGGCCTCGGCTCGAAGGTGTGCGG +
Preference number: 6 (lower is better)
Translates to: PGLACIAAAAQE*APDWPRLEGVR
Trigger: CCGCACACCTTCGAGCCGAGGCCAGTCCGGGGCCCACTCCTGCGCAGCGGCAGCGATGCAGGCGAGGCCAGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000533361.1
ENST00000534313.6
CDS CCA 72 bp ACCAGCTGCAGGCGCGCCACCACCTCGCCCACGGCTTaGCCGGGGGACCCGTCGAAGCGCAGCGTGATCGCC +
Preference number: 6 (lower is better)
Translates to: TSCRRATTSPTA*PGDPSKRSVIA
Trigger: GGCGATCACGCTGCGCTTCGACGGGTCCCCCGGCCAAGCCGTGGGCGAGGTGGTGGCGCGCCTGCAGCTGGT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS CAA 72 bp CACCAGCTGCAGGCGCGCCACCACCTCGCCCACGGCTaGGCCGGGGGACCCGTCGAAGCGCAGCGTGATCGC +
Preference number: 6 (lower is better)
Translates to: HQLQARHHLAHG*AGGPVEAQRDR
Trigger: GCGATCACGCTGCGCTTCGACGGGTCCCCCGGCCAAGCCGTGGGCGAGGTGGTGGCGCGCCTGCAGCTGGTG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS TCA 72 bp CACACCGCCGGCCCACATGGGCATGCTCTGTGGGCCTaGCTCTCCGGGGGCTGGGCCGCATTGGCGGGCACG +
Preference number: 6 (lower is better)
Translates to: HTAGPHGHALWA*LSGGWAALAGT
Trigger: CGTGCCCGCCAATGCGGCCCAGCCCCCGGAGAGTCAGGCCCACAGAGCATGCCCATGTGGGCCGGCGGTGTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000533361.1
ENST00000534313.6
CDS TCA 72 bp CCACGGCTTGGCCGGGGGACCCGTCGAAGCGCAGCGTaGTCGCCTCCCCGCGGCCGTGGTACAGGTCCAGCT +
Preference number: 6 (lower is better)
Translates to: PRLGRGTRRSAA*SPPRGRGTGPA
Trigger: AGCTGGACCTGTACCACGGCCGCGGGGAGGCGATCACGCTGCGCTTCGACGGGTCCCCCGGCCAAGCCGTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS TCA 72 bp AATCCCTCGGCGTCCACCTCGAAGCCCAGGCGGCCTTaGCCGTCGCGGGGCAGCGCCAGCTCGCGGGTCTCG +
Preference number: 6 (lower is better)
Translates to: NPSASTSKPRRP*PSRGSASSRVS
Trigger: CGAGACCCGCGAGCTGGCGCTGCCCCGCGACGGTCAAGGCCGCCTGGGCTTCGAGGTGGACGCCGAGGGATT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000531339.5
ENST00000534313.6
CDS GCA 72 bp AGGAGTGGGCCCCGGACTGGCCTCGGCTCGAAGGTGTaGGGTGTCAGCGGGGGCCTTGCTGGCTGGCGCAGC +
Preference number: 6 (lower is better)
Translates to: RSGPRTGLGSKV*GVSGGLAGWRS
Trigger: GCTGCGCCAGCCAGCAAGGCCCCCGCTGACACCGCACACCTTCGAGCCGAGGCCAGTCCGGGGCCCACTCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000533361.1
ENST00000534313.6
CDS CCA 72 bp TGCATCGCTGCCGCTGCGCAGGAGTGGGCCCCGGACTaGCCTCGGCTCGAAGGTGTGCGGTGTCAGCGGGGG +
Preference number: 6 (lower is better)
Translates to: CIAAAAQEWAPD*PRLEGVRCQRG
Trigger: CCCCCGCTGACACCGCACACCTTCGAGCCGAGGCCAGTCCGGGGCCCACTCCTGCGCAGCGGCAGCGATGCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000533361.1
ENST00000534313.6
CDS CCA 72 bp CGGGTGGAAGTGGCTGCAGGTCGGCTGGCCTCTTCGTaGCTGTGGGCACGGGCACGGGGGCTGGCTGGCGTG +
Preference number: 6 (lower is better)
Translates to: RVEVAAGRLASS*LWARARGLAGV
Trigger: CACGCCAGCCAGCCCCCGTGCCCGTGCCCACAGCCACGAAGAGGCCAGCCGACCTGCAGCCACTTCCACCCG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000533361.1
ENST00000534313.6
CDS CCA 72 bp TGCAGGTACTGCTGGCGGGTGCGCGTGGCCATGGCGTaGAACTGGCGCGCGTGGCCGGCCGCCTGCTCACCA +
Preference number: 6 (lower is better)
Translates to: CRYCWRVRVAMA*NWRAWPAACSP
Trigger: TGGTGAGCAGGCGGCCGGCCACGCGCGCCAGTTCCACGCCATGGCCACGCGCACCCGCCAGCAGTACCTGCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000530226.1
ENST00000534313.6
CDS CCA 72 bp GGTCTTGCAGGTACTGCTGGCGGGTGCGCGTGGCCATaGCGTGGAACTGGCGCGCGTGGCCGGCCGCCTGCT +
Preference number: 6 (lower is better)
Translates to: GLAGTAGGCAWP*RGTGARGRPPA
Trigger: AGCAGGCGGCCGGCCACGCGCGCCAGTTCCACGCCATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGACC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000530226.1
ENST00000534313.6
CDS CCA 72 bp TGGCCAGGTCTTGCAGGTACTGCTGGCGGGTGCGCGTaGCCATGGCGTGGAACTGGCGCGCGTGGCCGGCCG +
Preference number: 6 (lower is better)
Translates to: WPGLAGTAGGCA*PWRGTGARGRP
Trigger: CGGCCGGCCACGCGCGCCAGTTCCACGCCATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGACCTGGCCA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000530226.1
ENST00000534313.6
CDS CAA 72 bp GAATCCCTCGGCGTCCACCTCGAAGCCCAGGCGGCCTaGACCGTCGCGGGGCAGCGCCAGCTCGCGGGTCTC +
Preference number: 6 (lower is better)
Translates to: ESLGVHLEAQAA*TVAGQRQLAGL
Trigger: GAGACCCGCGAGCTGGCGCTGCCCCGCGACGGTCAAGGCCGCCTGGGCTTCGAGGTGGACGCCGAGGGATTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000531339.5
ENST00000534313.6
CDS CAA 90 bp GTGCGTGACGAATCCCTCGGCGTCCACCTCGAAGCCCAGGCGGCCTaGACCGTCGCGGGGCAGCGCCAGCTCGCGGGTCTCGCAGCCACG +
Preference number: 6 (lower is better)
Translates to: VRDESLGVHLEAQAA*TVAGQRQLAGLAAT
Trigger: CGTGGCTGCGAGACCCGCGAGCTGGCGCTGCCCCGCGACGGTCAAGGCCGCCTGGGCTTCGAGGTGGACGCCGAGGGATTCGTCACGCAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000531339.5
ENST00000534313.6
CDS GCA 72 bp TGCGGGCAAAGAGGTCATCTGTGGACGCAGGGGCCATaGCCCGCCGAGGGCTCCCCACACCGCCGGCCCACA +
Preference number: 6 (lower is better)
Translates to: CGQRGHLWTQGP*PAEGSPHRRPT
Trigger: TGTGGGCCGGCGGTGTGGGGAGCCCTCGGCGGGGCATGGCCCCTGCGTCCACAGATGACCTCTTTGCCCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000533361.1
ENST00000534313.6
CDS CCA 72 bp TACTGCTGGCGGGTGCGCGTGGCCATGGCGTGGAACTaGCGCGCGTGGCCGGCCGCCTGCTCACCATTCAGC +
Preference number: 6 (lower is better)
Translates to: YCWRVRVAMAWN*RAWPAACSPFS
Trigger: GCTGAATGGTGAGCAGGCGGCCGGCCACGCGCGCCAGTTCCACGCCATGGCCACGCGCACCCGCCAGCAGTA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000530226.1
ENST00000534313.6
CDS CAA 90 bp GGCCTGACTCTCCGGGGGCTGGGCCGCATTGGCGGGCACGGGTGTTaGGTGCCCAGCCTGAGGTTGTGGCAGCAGTTCCTGCCCGGCTGG +
Preference number: 6 (lower is better)
Translates to: GLTLRGLGRIGGHGC*VPSLRLWQQFLPGW
Trigger: CCAGCCGGGCAGGAACTGCTGCCACAACCTCAGGCTGGGCACCAAACACCCGTGCCCGCCAATGCGGCCCAGCCCCCGGAGAGTCAGGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526137.1
CDS TCA 72 bp TGCCACGGAGTGTCCGGAGCTGCGTGGTCCGCACGATaGCGCGGTAGCTGTGCAGGGTGCCCCCTCCGCTGC +
Preference number: 6 (lower is better)
Translates to: CHGVSGAAWSAR*RGSCAGCPLRC
Trigger: GCAGCGGAGGGGGCACCCTGCACAGCTACCGCGTCATCGTGCGGACCACGCAGCTCCGGACACTCCGTGGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
ENST00000534406.1
CDS GCA 72 bp TTTGGCCAGCAGGAAGGCCCGGAAGTCGGCGTTGGCTaGGAAGGGGCCTCCGCCAGCAGGCAGAGCTGGCCC +
Preference number: 6 (lower is better)
Translates to: FGQQEGPEVGVG*EGASASRQSWP
Trigger: GGGCCAGCTCTGCCTGCTGGCGGAGGCCCCTTCGCAGCCAACGCCGACTTCCGGGCCTTCCTGCTGGCCAAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000530226.1
ENST00000534313.6
CDS GCA 72 bp GCCATGGCGTGGAACTGGCGCGCGTGGCCGGCCGCCTaGTCACCATTCAGCGCTTTGGCCAGCAGGAAGGCC +
Preference number: 6 (lower is better)
Translates to: AMAWNWRAWPAA*SPFSALASRKA
Trigger: GGCCTTCCTGCTGGCCAAAGCGCTGAATGGTGAGCAGGCGGCCGGCCACGCGCGCCAGTTCCACGCCATGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000530226.1
ENST00000534313.6
CDS GCA 72 bp CGTTGGTGGCCAGGTCTTGCAGGTACTGCTGGCGGGTaGGCGTGGCCATGGCGTGGAACTGGCGCGCGTGGC +
Preference number: 6 (lower is better)
Translates to: RWWPGLAGTAGG*AWPWRGTGARG
Trigger: GCCACGCGCGCCAGTTCCACGCCATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGACCTGGCCACCAACG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000530226.1
ENST00000534313.6
CDS CCA 72 bp GCGCTTTGGCCAGCAGGAAGGCCCGGAAGTCGGCGTTaGCTGCGAAGGGGCCTCCGCCAGCAGGCAGAGCTG +
Preference number: 6 (lower is better)
Translates to: ALWPAGRPGSRR*LRRGLRQQAEL
Trigger: CAGCTCTGCCTGCTGGCGGAGGCCCCTTCGCAGCCAACGCCGACTTCCGGGCCTTCCTGCTGGCCAAAGCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000530226.1
ENST00000534313.6
CDS CCA 72 bp GCGCGTGGCCGGCCGCCTGCTCACCATTCAGCGCTTTaGCCAGCAGGAAGGCCCGGAAGTCGGCGTTGGCTG +
Preference number: 6 (lower is better)
Translates to: ARGRPPAHHSAL*PAGRPGSRRWL
Trigger: CAGCCAACGCCGACTTCCGGGCCTTCCTGCTGGCCAAAGCGCTGAATGGTGAGCAGGCGGCCGGCCACGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000530226.1
ENST00000534313.6
CDS CCA 72 bp CCAGGTGGTTCCAGACGGCTCAGGCCAGGTCGGCGGTaGGTGAGCCCAGCTGCTTGGAGGCCAGGAGGAGGC +
Preference number: 6 (lower is better)
Translates to: PGGSRRLRPGRR*VSPAAWRPGGG
Trigger: GCCTCCTCCTGGCCTCCAAGCAGCTGGGCTCACCCACCGCCGACCTGGCCTGAGCCGTCTGGAACCACCTGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000528699.1
ENST00000534313.6
CDS CAA 72 bp CGCGCGTGGCCGGCCGCCTGCTCACCATTCAGCGCTTaGGCCAGCAGGAAGGCCCGGAAGTCGGCGTTGGCT +
Preference number: 6 (lower is better)
Translates to: RAWPAACSPFSA*ASRKARKSALA
Trigger: AGCCAACGCCGACTTCCGGGCCTTCCTGCTGGCCAAAGCGCTGAATGGTGAGCAGGCGGCCGGCCACGCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000530226.1
ENST00000534313.6
CDS CAA 90 bp TGGAACTGGCGCGCGTGGCCGGCCGCCTGCTCACCATTCAGCGCTTaGGCCAGCAGGAAGGCCCGGAAGTCGGCGTTGGCTGCGAAGGGG +
Preference number: 6 (lower is better)
Translates to: WNWRAWPAACSPFSA*ASRKARKSALAAKG
Trigger: CCCCTTCGCAGCCAACGCCGACTTCCGGGCCTTCCTGCTGGCCAAAGCGCTGAATGGTGAGCAGGCGGCCGGCCACGCGCGCCAGTTCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000530226.1
ENST00000534313.6
CDS CAA 90 bp GGCCTGACTCTCCGGGGGCTGGGCCGCATTGGCGGGCACGGGTGTTaGGTGCCCAGCCTGAGGTTGTGGCAGCAGTTCCTGCCCTCTGGG +
Preference number: 6 (lower is better)
Translates to: GLTLRGLGRIGGHGC*VPSLRLWQQFLPSG
Trigger: CCCAGAGGGCAGGAACTGCTGCCACAACCTCAGGCTGGGCACCAAACACCCGTGCCCGCCAATGCGGCCCAGCCCCCGGAGAGTCAGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534313.6
CDS CAA 90 bp TGCTGCTCGGAGAAGGTCCAGGCCAGCACGTCGCGACAGGCGCAATaGAACACTACGCGGCCGTCGCGCGGCGCCACCAGCACCAGAGCC +
Preference number: 6 (lower is better)
Translates to: CCSEKVQASTSRQAQ*NTTRPSRGATSTRA
Trigger: GGCTCTGGTGCTGGTGGCGCCGCGCGACGGCCGCGTAGTGTTCAATTGCGCCTGTCGCGACGTGCTGGCCTGGACCTTCTCCGAGCAGCA
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS CAA 90 bp GGCCTGACTCTCCGGGGGCTGGGCCGCATTGGCGGGCACGGGTGTTaGGTGCCCAGCCTGAGGTTGTGGCAGCAGTTCCTGCCCTGGTCT +
Preference number: 6 (lower is better)
Translates to: GLTLRGLGRIGGHGC*VPSLRLWQQFLPWS
Trigger: AGACCAGGGCAGGAACTGCTGCCACAACCTCAGGCTGGGCACCAAACACCCGTGCCCGCCAATGCGGCCCAGCCCCCGGAGAGTCAGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527525.5
CDS TCA 72 bp CCGGCGCCTCCCACCCAGGGAGGGCAGGCCGAAGCGTaGAGCCGAGTCCAGCGACGTAGTGGTCACCTCGTT +
Preference number: 6 (lower is better)
Translates to: PAPPTQGGQAEA*SRVQRRSGHLV
Trigger: AACGAGGTGACCACTACGTCGCTGGACTCGGCTTCACGCTTCGGCCTGCCCTCCCTGGGTGGGAGGCGCCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS GCA 72 bp TGGCTCCTCCAGGATGGACACGGCCGCGTTGGGCAGTaGAGGGGGCACAGGTGGGGATGCTGGTCCACCCAG +
Preference number: 6 (lower is better)
Translates to: WLLQDGHGRVGQ*RGHRWGCWSTQ
Trigger: CTGGGTGGACCAGCATCCCCACCTGTGCCCCCTGCACTGCCCAACGCGGCCGTGTCCATCCTGGAGGAGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS GCA 72 bp GTGATCGCCTCCCCGCGGCCGTGGTACAGGTCCAGCTaGTGCTCGGAGAAGGTCCAGGCCAGCACGTCGCGA +
Preference number: 6 (lower is better)
Translates to: VIASPRPWYRSS*CSEKVQASTSR
Trigger: TCGCGACGTGCTGGCCTGGACCTTCTCCGAGCAGCAGCTGGACCTGTACCACGGCCGCGGGGAGGCGATCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS GCA 72 bp GTGGCAGAAAGGAGGCCCTCAGCTCCGGCGCCGGGTTaGCCTTGTCCTCAGAGCCACTGGGACTGCCTGGCC +
Preference number: 6 (lower is better)
Translates to: VAERRPSAPAPG*PCPQSHWDCLA
Trigger: GGCCAGGCAGTCCCAGTGGCTCTGAGGACAAGGGCAACCCGGCGCCGGAGCTGAGGGCCTCCTTTCTGCCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000529725.1
ENST00000531339.5
ENST00000534313.6
CDS CCA 72 bp CTCTGTGGGCCTGACTCTCCGGGGGCTGGGCCGCATTaGCGGGCACGGGTGTTTGGTGCCCAGCCTGAGGTT +
Preference number: 6 (lower is better)
Translates to: LCGPDSPGAGPH*RARVFGAQPEV
Trigger: AACCTCAGGCTGGGCACCAAACACCCGTGCCCGCCAATGCGGCCCAGCCCCCGGAGAGTCAGGCCCACAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000394224.3
ENST00000526137.1
ENST00000527525.5
ENST00000533361.1
ENST00000534313.6
CDS CCA 72 bp GTGAGCCCAGCTGCTTGGAGGCCAGGAGGAGGCGTGTaGCTGCACTCTCAGACTCCGCCTGCAGCCGCCGGT +
Preference number: 6 (lower is better)
Translates to: VSPAAWRPGGGV*LHSQTPPAAAG
Trigger: ACCGGCGGCTGCAGGCGGAGTCTGAGAGTGCAGCCACACGCCTCCTCCTGGCCTCCAAGCAGCTGGGCTCAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000528699.1
ENST00000534313.6
CDS CCA 72 bp CCCGGAGGGAAGTTGGGAGGGTGCTGGCGGCGAACGTaGCGAGGACCCCACTCCCATACACATCACCCGGGC +
Preference number: 6 (lower is better)
Translates to: PGGKLGGCWRRT*RGPHSHTHHPG
Trigger: GCCCGGGTGATGTGTATGGGAGTGGGGTCCTCGCCACGTTCGCCGCCAGCACCCTCCCAACTTCCCTCCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526137.1
CDS CAA 72 bp CTCCGGGGGCTGGGCCGCATTGGCGGGCACGGGTGTTaGGTGCCCAGCCTGAGGTTGTGGCAGCAGTTCCTG +
Preference number: 6 (lower is better)
Translates to: LRGLGRIGGHGC*VPSLRLWQQFL
Trigger: CAGGAACTGCTGCCACAACCTCAGGCTGGGCACCAAACACCCGTGCCCGCCAATGCGGCCCAGCCCCCGGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000394224.3
ENST00000526137.1
ENST00000527525.5
ENST00000533361.1
ENST00000534313.6
CDS CAA 72 bp GAGAAGGTCCAGGCCAGCACGTCGCGACAGGCGCAATaGAACACTACGCGGCCGTCGCGCGGCGCCACCAGC +
Preference number: 6 (lower is better)
Translates to: EKVQASTSRQAQ*NTTRPSRGATS
Trigger: GCTGGTGGCGCCGCGCGACGGCCGCGTAGTGTTCAATTGCGCCTGTCGCGACGTGCTGGCCTGGACCTTCTC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS CAA 72 bp CGTGGCAGAAAGGAGGCCCTCAGCTCCGGCGCCGGGTaGCCCTTGTCCTCAGAGCCACTGGGACTGCCTGGC +
Preference number: 6 (lower is better)
Translates to: RGRKEALSSGAG*PLSSEPLGLPG
Trigger: GCCAGGCAGTCCCAGTGGCTCTGAGGACAAGGGCAACCCGGCGCCGGAGCTGAGGGCCTCCTTTCTGCCACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000529725.1
ENST00000531339.5
ENST00000534313.6
CDS CAA 90 bp GGCCTGACTCTCCGGGGGCTGGGCCGCATTGGCGGGCACGGGTGTTaGGTGCCCAGCCTGAGGTTGTGGCAGCAGTTCCTGCCCTGTAGT +
Preference number: 6 (lower is better)
Translates to: GLTLRGLGRIGGHGC*VPSLRLWQQFLPCS
Trigger: ACTACAGGGCAGGAACTGCTGCCACAACCTCAGGCTGGGCACCAAACACCCGTGCCCGCCAATGCGGCCCAGCCCCCGGAGAGTCAGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533361.1
CDS TCA 72 bp AGAAGGTCCAGGCCAGCACGTCGCGACAGGCGCAATTaGACACTACGCGGCCGTCGCGCGGCGCCACCAGCA +
Preference number: 6 (lower is better)
Translates to: RRSRPARRDRRN*TLRGRRAAPPA
Trigger: TGCTGGTGGCGCCGCGCGACGGCCGCGTAGTGTTCAATTGCGCCTGTCGCGACGTGCTGGCCTGGACCTTCT
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000394224.3
ENST00000534313.6
CDS GCA 72 bp CCTCGGCTCGAAGGTGTGCGGTGTCAGCGGGGGCCTTaGTGGCTGGCGCAGCTTGCGGGCAAAGAGGTCATC +
Preference number: 6 (lower is better)
Translates to: PRLEGVRCQRGP*WLAQLAGKEVI
Trigger: GATGACCTCTTTGCCCGCAAGCTGCGCCAGCCAGCAAGGCCCCCGCTGACACCGCACACCTTCGAGCCGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000533361.1
ENST00000534313.6
CDS GCA 72 bp TGCCAGCGGGTCAGTGAAGAGCCGGGTGGAAGTGGCTaGAGGTCGGCTGGCCTCTTCGTGGCTGTGGGCACG +
Preference number: 6 (lower is better)
Translates to: CQRVSEEPGGSG*RSAGLFVAVGT
Trigger: CGTGCCCACAGCCACGAAGAGGCCAGCCGACCTGCAGCCACTTCCACCCGGCTCTTCACTGACCCGCTGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000533361.1
ENST00000534313.6
CDS GCA 72 bp AGCCCCGCCGTCTCGGCGAATGTGAAGCGCTCCACGTaGGTGACGAATCCCTCGGCGTCCACCTCGAAGCCC +
Preference number: 6 (lower is better)
Translates to: SPAVSANVKRST*VTNPSASTSKP
Trigger: GGGCTTCGAGGTGGACGCCGAGGGATTCGTCACGCACGTGGAGCGCTTCACATTCGCCGAGACGGCGGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000531339.5
ENST00000534313.6
CDS GCA 72 bp GCCCAGCTGCTTGGAGGCCAGGAGGAGGCGTGTGGCTaGACTCTCAGACTCCGCCTGCAGCCGCCGGTTGTT +
Preference number: 6 (lower is better)
Translates to: AQLLGGQEEACG*TLRLRLQPPVV
Trigger: AACAACCGGCGGCTGCAGGCGGAGTCTGAGAGTGCAGCCACACGCCTCCTCCTGGCCTCCAAGCAGCTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000528699.1
ENST00000534313.6
CDS CCA 72 bp GTCACCTCGTTGGTGGCCAGGTCTTGCAGGTACTGCTaGCGGGTGCGCGTGGCCATGGCGTGGAACTGGCGC +
Preference number: 6 (lower is better)
Translates to: VTSLVARSCRYC*RVRVAMAWNWR
Trigger: GCGCCAGTTCCACGCCATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGACCTGGCCACCAACGAGGTGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000530226.1
ENST00000534313.6
CDS CCA 72 bp AGCTGCTCGTTGGTGGCCAGGTCTTGCAGGTACTGCTaGCGGGTGCGCGTGGCCATGGCGTGGAACTGGCGC +
Preference number: 6 (lower is better)
Translates to: SCSLVARSCRYC*RVRVAMAWNWR
Trigger: GCGCCAGTTCCACGCCATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGACCTGGCCACCAACGAGCAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527525.5
CDS CCA 72 bp ATTGACTCGGGACTGAGCTGGAGCCCGGAGGGAAGTTaGGAGGGTGCTGGCGGCGAACGTGGCGAGGACCCC +
Preference number: 6 (lower is better)
Translates to: IDSGLSWSPEGS*EGAGGERGEDP
Trigger: GGGGTCCTCGCCACGTTCGCCGCCAGCACCCTCCCAACTTCCCTCCGGGCTCCAGCTCAGTCCCGAGTCAAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526137.1
CDS CAA 90 bp AGGCCGAAGCGTGAAGCCGAGTCCAGCGACGTAGTGGTCACCTCGTaGGTGGCCAGGTCTTGCAGGTACTGCTGGCGGGTGCGCGTGGCC +
Preference number: 6 (lower is better)
Translates to: RPKREAESSDVVVTS*VARSCRYCWRVRVA
Trigger: GGCCACGCGCACCCGCCAGCAGTACCTGCAAGACCTGGCCACCAACGAGGTGACCACTACGTCGCTGGACTCGGCTTCACGCTTCGGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000530226.1
ENST00000534313.6
CDS CAA 90 bp GACAAGGTACGTGGCAGAAAGGAGGCCCTCAGCTCCGGCGCCGGGTaGCCCTTGTCCTCAGAGCCACTGGGACTGCCTGGCCTGTCCTGG +
Preference number: 6 (lower is better)
Translates to: DKVRGRKEALSSGAG*PLSSEPLGLPGLSW
Trigger: CCAGGACAGGCCAGGCAGTCCCAGTGGCTCTGAGGACAAGGGCAACCCGGCGCCGGAGCTGAGGGCCTCCTTTCTGCCACGTACCTTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000531339.5
ENST00000534313.6
CDS GCA 72 bp GTGGTCACCTCGTTGGTGGCCAGGTCTTGCAGGTACTaGTGGCGGGTGCGCGTGGCCATGGCGTGGAACTGG +
Preference number: 6 (lower is better)
Translates to: VVTSLVARSCRY*WRVRVAMAWNW
Trigger: CCAGTTCCACGCCATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGACCTGGCCACCAACGAGGTGACCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000530226.1
ENST00000534313.6
CDS GCA 72 bp AGCGACGTAGTGGTCACCTCGTTGGTGGCCAGGTCTTaGAGGTACTGCTGGCGGGTGCGCGTGGCCATGGCG +
Preference number: 6 (lower is better)
Translates to: SDVVVTSLVARS*RYCWRVRVAMA
Trigger: CGCCATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGACCTGGCCACCAACGAGGTGACCACTACGTCGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000530226.1
ENST00000534313.6
CDS GCA 72 bp GCGCCGGGTTGCCCTTGTCCTCAGAGCCACTGGGACTaGCTGGCCTGTCCTGGGTCAGGGGTGTCTCACTGT +
Preference number: 6 (lower is better)
Translates to: APGCPCPQSHWD*LACPGSGVSHC
Trigger: ACAGTGAGACACCCCTGACCCAGGACAGGCCAGGCAGTCCCAGTGGCTCTGAGGACAAGGGCAACCCGGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000531339.5
ENST00000534313.6
CDS GCA 72 bp AGGAGGAGGCGTGTGGCTGCACTCTCAGACTCCGCCTaGAGCCGCCGGTTGTTGTGTCTCAGGCTCCGCACC +
Preference number: 6 (lower is better)
Translates to: RRRRVAALSDSA*SRRLLCLRLRT
Trigger: GGTGCGGAGCCTGAGACACAACAACCGGCGGCTGCAGGCGGAGTCTGAGAGTGCAGCCACACGCCTCCTCCT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000528699.1
ENST00000534313.6
CDS GCA 72 bp TCCAGCTGCTCGTTGGTGGCCAGGTCTTGCAGGTACTaGTGGCGGGTGCGCGTGGCCATGGCGTGGAACTGG +
Preference number: 6 (lower is better)
Translates to: SSCSLVARSCRY*WRVRVAMAWNW
Trigger: CCAGTTCCACGCCATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGACCTGGCCACCAACGAGCAGCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527525.5
CDS GCA 72 bp TGGTACAGGTCCAGCTGCTCGTTGGTGGCCAGGTCTTaGAGGTACTGCTGGCGGGTGCGCGTGGCCATGGCG +
Preference number: 6 (lower is better)
Translates to: WYRSSCSLVARS*RYCWRVRVAMA
Trigger: CGCCATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGACCTGGCCACCAACGAGCAGCTGGACCTGTACCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527525.5
CDS CCA 72 bp TGTAGGCCGAGGTTCGGTTCTGTGGCTCCTCCAGGATaGACACGGCCGCGTTGGGCAGTGCAGGGGGCACAG +
Preference number: 6 (lower is better)
Translates to: CRPRFGSVAPPG*TRPRWAVQGAQ
Trigger: CTGTGCCCCCTGCACTGCCCAACGCGGCCGTGTCCATCCTGGAGGAGCCACAGAACCGAACCTCGGCCTACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS CCA 72 bp TGCGTGCTCCAGGCTGTAGGCCGAGGTTCGGTTCTGTaGCTCCTCCAGGATGGACACGGCCGCGTTGGGCAG +
Preference number: 6 (lower is better)
Translates to: CVLQAVGRGSVL*LLQDGHGRVGQ
Trigger: CTGCCCAACGCGGCCGTGTCCATCCTGGAGGAGCCACAGAACCGAACCTCGGCCTACAGCCTGGAGCACGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS CCA 72 bp ATGGCTTGGCTGTGGTGGCCAGGAGGAGGTCCGGGGTaGTGTTGGGCAGGACTGGGGCCTCATCCGACAGAG +
Preference number: 6 (lower is better)
Translates to: MAWLWWPGGGPG*CWAGLGPHPTE
Trigger: CTCTGTCGGATGAGGCCCCAGTCCTGCCCAACACCACCCCGGACCTCCTCCTGGCCACCACAGCCAAGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000531339.5
ENST00000534313.6
CDS CAA 72 bp CAGCGACGTAGTGGTCACCTCGTTGGTGGCCAGGTCTaGCAGGTACTGCTGGCGGGTGCGCGTGGCCATGGC +
Preference number: 6 (lower is better)
Translates to: QRRSGHLVGGQV*QVLLAGARGHG
Trigger: GCCATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGACCTGGCCACCAACGAGGTGACCACTACGTCGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000530226.1
ENST00000534313.6
CDS CAA 72 bp GTGGTACAGGTCCAGCTGCTCGTTGGTGGCCAGGTCTaGCAGGTACTGCTGGCGGGTGCGCGTGGCCATGGC +
Preference number: 6 (lower is better)
Translates to: VVQVQLLVGGQV*QVLLAGARGHG
Trigger: GCCATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGACCTGGCCACCAACGAGCAGCTGGACCTGTACCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527525.5
CDS CAA 90 bp AGCCGAGTCCAGCGACGTAGTGGTCACCTCGTTGGTGGCCAGGTCTaGCAGGTACTGCTGGCGGGTGCGCGTGGCCATGGCGTGGAACTG +
Preference number: 6 (lower is better)
Translates to: SRVQRRSGHLVGGQV*QVLLAGARGHGVEL
Trigger: CAGTTCCACGCCATGGCCACGCGCACCCGCCAGCAGTACCTGCAAGACCTGGCCACCAACGAGGTGACCACTACGTCGCTGGACTCGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000530226.1
ENST00000534313.6
CDS CAA 90 bp ACTGATGGCTTGGCTGTGGTGGCCAGGAGGAGGTCCGGGGTGGTGTaGGGCAGGACTGGGGCCTCATCCGACAGAGAGCTGCGTGGTGAC +
Preference number: 6 (lower is better)
Translates to: TDGLAVVARRRSGVV*GRTGASSDRELRGD
Trigger: GTCACCACGCAGCTCTCTGTCGGATGAGGCCCCAGTCCTGCCCAACACCACCCCGGACCTCCTCCTGGCCACCACAGCCAAGCCATCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS GCA 72 bp CCTCCTCCGAGCCCTGGCCCGCCCGGCAGTACAGGATaGCCACCTTGCGTTGGAAGCTCAGCACTTGCTCAT +
Preference number: 6 (lower is better)
Translates to: PPPSPGPPGSTG*PPCVGSSALAH
Trigger: ATGAGCAAGTGCTGAGCTTCCAACGCAAGGTGGGCATCCTGTACTGCCGGGCGGGCCAGGGCTCGGAGGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS GCA 72 bp GGACTGCCACCATCTTGCAGGCACAGGTGCAGCAGCTaGTTTGTGGTGGGCAGCAGGGTCACCCCCTGGACC +
Preference number: 6 (lower is better)
Translates to: GLPPSCRHRCSS*FVVGSRVTPWT
Trigger: GGTCCAGGGGGTGACCCTGCTGCCCACCACAAAGCAGCTGCTGCACCTGTGCCTGCAAGATGGTGGCAGTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS CCA 72 bp TCGAAGGTGTGCGGTGTCAGCGGGGGCCTTGCTGGCTaGCGCAGCTTGCGGGCAAAGAGGTCATCTGTGGAC +
Preference number: 6 (lower is better)
Translates to: SKVCGVSGGLAG*RSLRAKRSSVD
Trigger: GTCCACAGATGACCTCTTTGCCCGCAAGCTGCGCCAGCCAGCAAGGCCCCCGCTGACACCGCACACCTTCGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000533361.1
ENST00000534313.6
CDS CCA 72 bp AGACAGGGGGCTGGACATATTGACTCGGGACTGAGCTaGAGCCCGGAGGGAAGTTGGGAGGGTGCTGGCGGC +
Preference number: 6 (lower is better)
Translates to: RQGAGHIDSGLS*SPEGSWEGAGG
Trigger: GCCGCCAGCACCCTCCCAACTTCCCTCCGGGCTCCAGCTCAGTCCCGAGTCAATATGTCCAGCCCCCTGTCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526137.1
CDS GCA 72 bp GTGCAGGGTGTGTGTGCCCGCACCACTAGGAACACGTaGTGGAAGTGCGAGCGGATGGTGGTGGGGCAGAAG +
Preference number: 6 (lower is better)
Translates to: VQGVCARTTRNT*WKCERMVVGQK
Trigger: CTTCTGCCCCACCACCATCCGCTCGCACTTCCAGCACGTGTTCCTAGTGGTGCGGGCACACACACCCTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000530226.1
ENST00000534313.6
CDS GCA 72 bp GCGCCGGGTTGCCCTTGTCCTCAGAGCCACTGGGACTaGCTGGCCTGTCCTGTGCCACAGAAGTGGATACAG +
Preference number: 6 (lower is better)
Translates to: APGCPCPQSHWD*LACPVPQKWIQ
Trigger: CTGTATCCACTTCTGTGGCACAGGACAGGCCAGGCAGTCCCAGTGGCTCTGAGGACAAGGGCAACCCGGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529725.1
CDS CAA 72 bp CGTGAAGCCGAGTCCAGCGACGTAGTGGTCACCTCGTaGGTGGCCAGGTCTTGCAGGTACTGCTGGCGGGTG +
Preference number: 6 (lower is better)
Translates to: REAESSDVVVTS*VARSCRYCWRV
Trigger: CACCCGCCAGCAGTACCTGCAAGACCTGGCCACCAACGAGGTGACCACTACGTCGCTGGACTCGGCTTCACG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000530226.1
ENST00000534313.6
CDS CAA 72 bp AGGGGTGTCTCACTGTCAGCACTGGGTACTGATGGCTaGGCTGTGGTGGCCAGGAGGAGGTCCGGGGTGGTG +
Preference number: 6 (lower is better)
Translates to: RGVSLSALGTDG*AVVARRRSGVV
Trigger: CACCACCCCGGACCTCCTCCTGGCCACCACAGCCAAGCCATCAGTACCCAGTGCTGACAGTGAGACACCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000531339.5
ENST00000534313.6
CDS CAA 90 bp AAGCTCAGCACTTGCTCATCCAGTGTGAGCAGCGTCCGTGGTACCTaGGGTGAAGCTGAGCCCAGGCGCAGGCAGCTGGGGCTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: KLSTCSSSVSSVRGT*GEAEPRRRQLGLSC
Trigger: GCAGCTGAGCCCCAGCTGCCTGCGCCTGGGCTCAGCTTCACCCAAGGTACCACGGACGCTGCTCACACTGGATGAGCAAGTGCTGAGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS GCA 72 bp ATGGTGTTGCAAGTAGAGGCAATCTCCGAGATGGCCTaGCACTCGTCCTCCAGGGTCCCACTGCCCGCCTCC +
Preference number: 6 (lower is better)
Translates to: MVLQVEAISEMA*HSSSRVPLPAS
Trigger: GGAGGCGGGCAGTGGGACCCTGGAGGACGAGTGGCAGGCCATCTCGGAGATTGCCTCTACTTGCAACACCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000529725.1
ENST00000531339.5
ENST00000534313.6
CDS CCA 72 bp GATCCTGCTGATGGAGTTCCGCAGAGACAAGGTACGTaGCAGAAAGGAGGCCCTCAGCTCCGGCGCCGGGTT +
Preference number: 6 (lower is better)
Translates to: DPADGVPQRQGT*QKGGPQLRRRV
Trigger: AACCCGGCGCCGGAGCTGAGGGCCTCCTTTCTGCCACGTACCTTGTCTCTGCGGAACTCCATCAGCAGGATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000529725.1
ENST00000531339.5
ENST00000534313.6
CDS GCA 72 bp GACAGAGAGCTGCGTGGTGACAGCGAGTTCTGGCTGTaGAGGAACTCAGTCCTCTCCTCGGCCAGATCCCCA +
Preference number: 6 (lower is better)
Translates to: DRELRGDSEFWL*RNSVLSSARSP
Trigger: TGGGGATCTGGCCGAGGAGAGGACTGAGTTCCTGCACAGCCAGAACTCGCTGTCACCACGCAGCTCTCTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS CCA 72 bp GTCATAGTGGGCAAACCATCGAGGCTCAAGCACTGGTaGGAAGGCAGGCTCTGGTTCCTCTGCTGGCAGCCC +
Preference number: 6 (lower is better)
Translates to: VIVGKPSRLKHW*EGRLWFLCWQP
Trigger: GGGCTGCCAGCAGAGGAACCAGAGCCTGCCTTCCCACCAGTGCTTGAGCCTCGATGGTTTGCCCACTATGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS CCA 72 bp TTCTCTGAGAGGTTCCCAGGCTCTGGCCTGAAGACATaGGGGTCAAGACTCAGCAGGACCAAGGCAGGGGGC +
Preference number: 6 (lower is better)
Translates to: FSERFPGSGLKT*GSRLSRTKAGG
Trigger: GCCCCCTGCCTTGGTCCTGCTGAGTCTTGACCCCCATGTCTTCAGGCCAGAGCCTGGGAACCTCTCAGAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528699.1
CDS CAA 90 bp TCTGGGATGGGCTGTCCCTCTCGGGACAGCGACTCCAGAATGGTGTaGCAAGTAGAGGCAATCTCCGAGATGGCCTGCCACTCGTCCTCC +
Preference number: 6 (lower is better)
Translates to: SGMGCPSRDSDSRMV*QVEAISEMACHSSS
Trigger: GGAGGACGAGTGGCAGGCCATCTCGGAGATTGCCTCTACTTGCAACACCATTCTGGAGTCGCTGTCCCGAGAGGGACAGCCCATCCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000529725.1
ENST00000531339.5
ENST00000534313.6
CDS TCA 72 bp ACCGGGCCCAGCGACTCGTCCATCCCGAAGAAGTTCTaGTGTTCTGGGGGACCGCGCCGAAGAAAACGATTG +
Preference number: 6 (lower is better)
Translates to: TGPSDSSIPKKF*CSGGPRRRKRL
Trigger: CAATCGTTTTCTTCGGCGCGGTCCCCCAGAACATCAGAACTTCTTCGGGATGGACGAGTCGCTGGGCCCGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534406.1
CDS CCA 72 bp CACGTCATAGTGGGCAAACCATCGAGGCTCAAGCACTaGTGGGAAGGCAGGCTCTGGTTCCTCTGCTGGCAG +
Preference number: 6 (lower is better)
Translates to: HVIVGKPSRLKH*WEGRLWFLCWQ
Trigger: CTGCCAGCAGAGGAACCAGAGCCTGCCTTCCCACCAGTGCTTGAGCCTCGATGGTTTGCCCACTATGACGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS CCA 72 bp CAGCGACTCGTCCATCCCGAAGAAGTTCTGATGTTCTaGGGGACCGCGCCGAAGAAAACGATTGGTCCCGCC +
Preference number: 6 (lower is better)
Translates to: QRLVHPEEVLMF*GTAPKKTIGPA
Trigger: GGCGGGACCAATCGTTTTCTTCGGCGCGGTCCCCCAGAACATCAGAACTTCTTCGGGATGGACGAGTCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534406.1
CDS CAA 72 bp GGCTGTCCCTCTCGGGACAGCGACTCCAGAATGGTGTaGCAAGTAGAGGCAATCTCCGAGATGGCCTGCCAC +
Preference number: 6 (lower is better)
Translates to: GCPSRDSDSRMV*QVEAISEMACH
Trigger: GTGGCAGGCCATCTCGGAGATTGCCTCTACTTGCAACACCATTCTGGAGTCGCTGTCCCGAGAGGGACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000529725.1
ENST00000531339.5
ENST00000534313.6
CDS CAA 90 bp GCTCCCCATCCCCTGAGACCTCGGAGCCCAATCAAAGAGCAGGCTTaGCACGTCATAGTGGGCAAACCATCGAGGCTCAAGCACTGGTGG +
Preference number: 6 (lower is better)
Translates to: APHPLRPRSPIKEQA*HVIVGKPSRLKHWW
Trigger: CCACCAGTGCTTGAGCCTCGATGGTTTGCCCACTATGACGTGCAAAGCCTGCTCTTTGATTGGGCTCCGAGGTCTCAGGGGATGGGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS TCA 72 bp CCTTGCGTTGGAAGCTCAGCACTTGCTCATCCAGTGTaGGCAGCGTCCGTGGTACCTTGGGTGAAGCTGAGC +
Preference number: 6 (lower is better)
Translates to: PCVGSSALAHPV*AASVVPWVKLS
Trigger: GCTCAGCTTCACCCAAGGTACCACGGACGCTGCTCACACTGGATGAGCAAGTGCTGAGCTTCCAACGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS TCA 72 bp GAGAGACCTTCTCTGAGAGGTTCCCAGGCTCTGGCCTaGAGACATGGGGGTCAAGACTCAGCAGGACCAAGG +
Preference number: 6 (lower is better)
Translates to: ERPSLRGSQALA*RHGGQDSAGPR
Trigger: CCTTGGTCCTGCTGAGTCTTGACCCCCATGTCTTCAGGCCAGAGCCTGGGAACCTCTCAGAGAAGGTCTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528699.1
CDS TCA 72 bp TCCTGCCCTGGTCTCACTGATGCAGACAGGGAGGTCTaGACCCCATGTGACAGATGGTCAGATGAGGTCCAG +
Preference number: 6 (lower is better)
Translates to: SCPGLTDADREV*TPCDRWSDEVQ
Trigger: CTGGACCTCATCTGACCATCTGTCACATGGGGTTCAGACCTCCCTGTCTGCATCAGTGAGACCAGGGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527525.5
CDS GCA 72 bp ATAGAAGTATTTGCGGTAGTAGCCAGCACCCAGGTCTaGGTGCTCCAGGCTGTAGGCCGAGGTTCGGTTCTG +
Preference number: 6 (lower is better)
Translates to: IEVFAVVASTQV*VLQAVGRGSVL
Trigger: CAGAACCGAACCTCGGCCTACAGCCTGGAGCACGCAGACCTGGGTGCTGGCTACTACCGCAAATACTTCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS CAA 72 bp CCCCTGAGACCTCGGAGCCCAATCAAAGAGCAGGCTTaGCACGTCATAGTGGGCAAACCATCGAGGCTCAAG +
Preference number: 6 (lower is better)
Translates to: PLRPRSPIKEQA*HVIVGKPSRLK
Trigger: CTTGAGCCTCGATGGTTTGCCCACTATGACGTGCAAAGCCTGCTCTTTGATTGGGCTCCGAGGTCTCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000534313.6
CDS TCA 72 bp GCCTGTCCTGTGCCACAGAAGTGGATACAGATTCAGTaGTGCCCACTGTCACCACTGTGCTGTTGGGCTCCA +
Preference number: 6 (lower is better)
Translates to: ACPVPQKWIQIQ*CPLSPLCCWAP
Trigger: TGGAGCCCAACAGCACAGTGGTGACAGTGGGCATCACTGAATCTGTATCCACTTCTGTGGCACAGGACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000529725.1
CDS CCA 72 bp TCCTGGAACACGATGGTCACAATGTCGTTGCCAATGTaGCGCTTCCGGAGGAGCTGCTGCTGGTTATTAGGG +
Preference number: 6 (lower is better)
Translates to: SWNTMVTMSLPM*RFRRSCCWLLG
Trigger: CCCTAATAACCAGCAGCAGCTCCTCCGGAAGCGCCACATTGGCAACGACATTGTGACCATCGTGTTCCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000530226.1
ENST00000534313.6
CDS TCA 72 bp CTTCCTGAGCATGGACTCCAAGTGAGAGACCTTCTCTaGGAGGTTCCCAGGCTCTGGCTCAGCATCAGATTT +
Preference number: 6 (lower is better)
Translates to: LPEHGLQVRDLL*EVPRLWLSIRF
Trigger: AAATCTGATGCTGAGCCAGAGCCTGGGAACCTCTCAGAGAAGGTCTCTCACTTGGAGTCCATGCTCAGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000394224.3
ENST00000527525.5
ENST00000529725.1
ENST00000531339.5
ENST00000534313.6