RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SIMC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000170085

Ensembl transcript IDs: ENST00000332772.4, ENST00000341199.10, ENST00000429602.7, ENST00000430704.6, ENST00000443967.5, ENST00000481515.1, ENST00000503595.1, ENST00000508769.1

Found 314 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGTTCAGGAGGTATTCTTaGCATTCAGTGCTTGGCAGG +
Preference number: 2 (lower is better)
Translates to: VVGTLNDIILVYRLGSAEFRRYS*HSVLGR
Trigger: CCTGCCAAGCACTGAATGCCAAGAATACCTCCTGAA...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
3UTR-3UTR CCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGTTCAGGAGGTATTCTTaGCATTCAGTGCTTGGCAGG +
Preference number: 2 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILFRRYS*HSVLGR
Trigger: CCTGCCAAGCACTGAATGCCAAGAATACCTCCTGAA...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
3UTR-3UTR CCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGAGCTTCTGAGCAGTTaGAGAGAGAGTTCAGGAGGT +
Preference number: 2 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLELLSS*RESSGG
Trigger: ACCTCCTGAACTCTCTCTCCAACTGCTCAGAAGCTC...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
3UTR-3UTR CCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTGAGCTTCTGAGCAGTTaGAGAGAGAGTTCAGGAGGT +
Preference number: 2 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGELLSS*RESSGG
Trigger: ACCTCCTGAACTCTCTCTCCAACTGCTCAGAAGCTC...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
3UTR-3UTR CCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTCAGGAGGTATTCTTaGCATTCAGTGCTTGGCAGG +
Preference number: 2 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIFRRYS*HSVLGR
Trigger: CCTGCCAAGCACTGAATGCCAAGAATACCTCCTGAA...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
3UTR-3UTR TCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATATATTTAAGCCATATTTaGGAACAGGCTAGGATAGGA +
Preference number: 2 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDIYLSHI*EQARIG
Trigger: TCCTATCCTAGCCTGTTCTCAAATATGGCTTAAATA...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000443967.5
3UTR-3UTR TCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGTATTTAAGCCATATTTaGGAACAGGCTAGGATAGGA +
Preference number: 2 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILYLSHI*EQARIG
Trigger: TCCTATCCTAGCCTGTTCTCAAATATGGCTTAAATA...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000443967.5
3UTR-3UTR TCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATATTTAAGCCATATTTaGGAACAGGCTAGGATAGGA +
Preference number: 2 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIYLSHI*EQARIG
Trigger: TCCTATCCTAGCCTGTTCTCAAATATGGCTTAAATA...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000443967.5
3UTR-3UTR CAA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTTCAGGAGGTATTCTaGGCATTCAGTGCTTGGCAG +
Preference number: 3 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILVQEVF*AFSAWQ
Trigger: CTGCCAAGCACTGAATGCCAAGAATACCTCCTGAAC...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
3UTR-3UTR CAA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATAGTTCAGGAGGTATTCTaGGCATTCAGTGCTTGGCAG +
Preference number: 3 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIVQEVF*AFSAWQ
Trigger: CTGCCAAGCACTGAATGCCAAGAATACCTCCTGAAC...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
3UTR-3UTR CAA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGTTCAGGAGGTATTCTaGGCATTCAGTGCTTGGCAG +
Preference number: 3 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLVQEVF*AFSAWQ
Trigger: CTGCCAAGCACTGAATGCCAAGAATACCTCCTGAAC...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATATTCCTGCTTCTGAGGTaGCGGCGGCGGGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDIFLLLR*RRRGGG
Trigger: GCCGCCGCCCCGCCGCCGCCACCTCAGAAGCAGGAA...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000341199.10
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGTTCCTGCTTCTGAGGTaGCGGCGGCGGGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILFLLLR*RRRGGG
Trigger: GCCGCCGCCCCGCCGCCGCCACCTCAGAAGCAGGAA...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341199.10
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTATTCCTGCTTCTGAGGTaGCGGCGGCGGGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLFLLLR*RRRGGG
Trigger: GCCGCCGCCCCGCCGCCGCCACCTCAGAAGCAGGAA...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000341199.10
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGCGAAGACCCAGGCAGTaGCGGCGGCGGCGACGACTT +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAERRPRQ*RRRRRL
Trigger: AAGTCGTCGCCGCCGCCGCCACTGCCTGGGTCTTCG...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAGGCTCCCCCAGCATCTaGATCAGGCGGCTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDIGSPSI*IRRLRK
Trigger: CTTCCGCAGCCGCCTGATCCAGATGCTGGGGGAGCC...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATACGAAGACCCAGGCAGTaGCGGCGGCGGCGACGACTT +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIRRPRQ*RRRRRL
Trigger: AAGTCGTCGCCGCCGCCGCCACTGCCTGGGTCTTCG...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGGCTCCCCCAGCATCTaGATCAGGCGGCTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILGSPSI*IRRLRK
Trigger: CTTCCGCAGCCGCCTGATCCAGATGCTGGGGGAGCC...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGCTCCCCCAGCATCTaGATCAGGCGGCTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLGSPSI*IRRLRK
Trigger: CTTCCGCAGCCGCCTGATCCAGATGCTGGGGGAGCC...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATATTGGCATTCAGTGCTTaGCAGGCCCTCAGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDILAFSA*QALRSR
Trigger: GCGGCTCCTGAGGGCCTGCCAAGCACTGAATGCCAA...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATAGGCTCTCGGTGGGCATaGCAAAGGTCGCAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIGSRWA*QRSQGA
Trigger: TGCCCCCTGCGACCTTTGCCATGCCCACCGAGAGCC...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000429602.7
ENST00000443967.5
CDS-3UTR CCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTGGCTCTCGGTGGGCATaGCAAAGGTCGCAGGGGGCA +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGGSRWA*QRSQGA
Trigger: TGCCCCCTGCGACCTTTGCCATGCCCACCGAGAGCC...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429602.7
ENST00000443967.5
CDS-3UTR GCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGGATTGCTGCAGGTGCTaGCGTTGCCTCCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAEDCCRC*RCLLRV
Trigger: GACCCTGAGGAGGCAACGGCAGCACCTGCAGCAATC...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGACAGAGGCAGGCGGGTaGGTGTCTCACAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAETEAGG*VSHSCG
Trigger: TCCACAGCTGTGAGACACCCACCCGCCTGCCTCTGT...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGTTGGCATTCAGTGCTTaGCAGGCCCTCAGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAELAFSA*QALRSR
Trigger: GCGGCTCCTGAGGGCCTGCCAAGCACTGAATGCCAA...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGTTGGCATTCAGTGCTTaGCAGGCCCTCAGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILLAFSA*QALRSR
Trigger: GCGGCTCCTGAGGGCCTGCCAAGCACTGAATGCCAA...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR TCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGAGGCAGAGGTTGCAGTaGGCTGAGGTTGTGCGACTG +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAERQRLQ*AEVVRL
Trigger: CAGTCGCACAACCTCAGCTCACTGCAACCTCTGCCT...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443967.5
CDS-3UTR GCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATAGATTGCTGCAGGTGCTaGCGTTGCCTCCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIDCCRC*RCLLRV
Trigger: GACCCTGAGGAGGCAACGGCAGCACCTGCAGCAATC...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGATTGCTGCAGGTGCTaGCGTTGCCTCCTCAGGGTC +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLDCCRC*RCLLRV
Trigger: GACCCTGAGGAGGCAACGGCAGCACCTGCAGCAATC...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGATGGATTGCTGCAGGTaGTGCCGTTGCCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILMDCCR*CRCLLR
Trigger: CCTGAGGAGGCAACGGCAGCACCTGCAGCAATCCAT...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAACAGAGGCAGGCGGGTaGGTGTCTCACAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLTEAGG*VSHSCG
Trigger: TCCACAGCTGTGAGACACCCACCCGCCTGCCTCTGT...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTACAGAGGCAGGCGGGTaGGTGTCTCACAGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGTEAGG*VSHSCG
Trigger: TCCACAGCTGTGAGACACCCACCCGCCTGCCTCTGT...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAACTTTGTCTTGGAGTTaGGGGACAAGAGGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDITLSWS*GTRGSP
Trigger: GGGGGAGCCTCTTGTCCCCCAACTCCAAGACAAAGT...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGCATTCAGTGCTTaGCAGGCCCTCAGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIILAFSA*QALRSR
Trigger: GCGGCTCCTGAGGGCCTGCCAAGCACTGAATGCCAA...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTATTGGCATTCAGTGCTTaGCAGGCCCTCAGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLLAFSA*QALRSR
Trigger: GCGGCTCCTGAGGGCCTGCCAAGCACTGAATGCCAA...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGCACGGCAAGGCCTGTaGTGGGCGAGATACATCTTG +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILARQGL*WARYIL
Trigger: CAAGATGTATCTCGCCCACCACAGGCCTTGCCGTGC...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429602.7
ENST00000443967.5
CDS-3UTR CCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATACACCTCTGCCATGGTTaGAAGCTTCCTGAGGTCCTC +
Preference number: 4 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDIHLCHG*KLPEVL
Trigger: GAGGACCTCAGGAAGCTTCCAACCATGGCAGAGGTG...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000443967.5
CDS-3UTR TCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTGCACTCCAGCCTGAGTaGCACAGCAAGACACCGTCA +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGALQPE*HSKTPS
Trigger: TGACGGTGTCTTGCTGTGTCACTCAGGCTGGAGTGC...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443967.5
CDS-3UTR GCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATAATGGATTGCTGCAGGTaGTGCCGTTGCCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIMDCCR*CRCLLR
Trigger: CCTGAGGAGGCAACGGCAGCACCTGCAGCAATCCAT...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATACTGACATTGTGGGGCTaGTTGTCACAGGAAAGCACC +
Preference number: 4 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDILTLWG*LSQEST
Trigger: GGTGCTTTCCTGTGACAAGCAGCCCCACAATGTCAG...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATTCTTGGCATTCAGTaGTTGGCAGGCCCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDIILGIQ*LAGPQE
Trigger: CTCCTGAGGGCCTGCCAAGCACTGAATGCCAAGAAT...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGTATTGGAGCTGCAGGTaGGGGTCCTGTCCACCTCTA +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILYWSCR*GSCPPL
Trigger: TAGAGGTGGACAGGACCCCCACCTGCAGCTCCAATA...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGTATTGGAGCTGCAGGTaGGGGTCCTGTCCACCTCTA +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAEYWSCR*GSCPPL
Trigger: TAGAGGTGGACAGGACCCCCACCTGCAGCTCCAATA...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATATCTCGGCAATTTTATTaGAGCTGCAGGTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDISRQFY*SCRWGS
Trigger: GGACCCCCACCTGCAGCTCCAATAAAATTGCCGAGA...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGACTTTGTCTTGGAGTTaGGGGACAAGAGGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAETLSWS*GTRGSP
Trigger: GGGGGAGCCTCTTGTCCCCCAACTCCAAGACAAAGT...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGCACGGCAAGGCCTGTaGTGGGCGAGATACATCTTG +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLARQGL*WARYIL
Trigger: CAAGATGTATCTCGCCCACCACAGGCCTTGCCGTGC...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429602.7
ENST00000443967.5
CDS-3UTR TCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGCTCCTCAGGGTCTGCTaGAAGTCATCTTCTAGGGTC +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILLLRVC*KSSSRV
Trigger: GACCCTAGAAGATGACTTTCAGCAGACCCTGAGGAG...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR TCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGATGGAGAGCATCCTCTaGAGCTGGCACACAATCAGC +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILMESIL*SWHTIS
Trigger: GCTGATTGTGTGCCAGCTTCAGAGGATGCTCTCCAT...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR TCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGATGGAGAGCATCCTCTaGAGCTGGCACACAATCAGC +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAEMESIL*SWHTIS
Trigger: GCTGATTGTGTGCCAGCTTCAGAGGATGCTCTCCAT...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR TCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGCTACGTCTACCACTGTaGTGTCATCTCCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAELRLPL*CHLLAG
Trigger: CCCAGCAAGGAGATGACATCACAGTGGTAGACGTAG...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR TCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGCTACGTCTACCACTGTaGTGTCATCTCCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILLRLPL*CHLLAG
Trigger: CCCAGCAAGGAGATGACATCACAGTGGTAGACGTAG...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGTTTGCAATGGATTGCTaGAGGTGCTGCCGTTGCCTC +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILFAMDC*RCCRCL
Trigger: GAGGCAACGGCAGCACCTGCAGCAATCCATTGCAAA...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATGTTTGCAATGGATTaGTGCAGGTGCTGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDIMFAMD*CRCCRC
Trigger: GCAACGGCAGCACCTGCAGCAATCCATTGCAAACAT...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGCTGACATTGTGGGGCTaGTTGTCACAGGAAAGCACC +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILLTLWG*LSQEST
Trigger: GGTGCTTTCCTGTGACAAGCAGCCCCACAATGTCAG...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATACAATTTTATTGGAGCTaGAGGTGGGGGTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDIQFYWS*RWGSCP
Trigger: TGGACAGGACCCCCACCTGCAGCTCCAATAAAATTG...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATACGGAAGGCCTCAATCTaGTTCTCTACGTCTACCACT +
Preference number: 4 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDIRKASI*FSTSTT
Trigger: AGTGGTAGACGTAGAGAAGCAGATTGAGGCCTTCCG...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATACTTTTGAAAGGGCTCTaGATCAGGGTTCAAGTCCGC +
Preference number: 4 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDILLKGL*IRVQVR
Trigger: GCGGACTTGAACCCTGATGCAGAGCCCTTTCAAAAG...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGATTCTTGGCATTCAGTaGTTGGCAGGCCCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILILGIQ*LAGPQE
Trigger: CTCCTGAGGGCCTGCCAAGCACTGAATGCCAAGAAT...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAGTGCTTTTTGATTGCTaGTGCTGCTGCTGCTCCTAC +
Preference number: 4 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDIVLFDC*CCCCSY
Trigger: GTAGGAGCAGCAGCAGCAGCAGCAATCAAAAAGCAC...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000429602.7
ENST00000443967.5
CDS-3UTR CCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAACATCCCTGACATTGTaGGGCTGCTTGTCACAGGAA +
Preference number: 4 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDITSLTL*GCLSQE
Trigger: TTCCTGTGACAAGCAGCCCCACAATGTCAGGGATGT...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGTTTGTCAGGTTGGGCTaGGAAGAAGGGTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAEFVRLG*EEGWLL
Trigger: CAGTAGCCACCCTTCTTCCCAGCCCAACCTGACAAA...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGTTTGTCAGGTTGGGCTaGGAAGAAGGGTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILFVRLG*EEGWLL
Trigger: CAGTAGCCACCCTTCTTCCCAGCCCAACCTGACAAA...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGCCACCTCTACGGCTATaGAGAGCATCCTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAEPPLRL*RASSEA
Trigger: AGCTTCAGAGGATGCTCTCCATAGCCGTAGAGGTGG...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATATTGGAGCTGCAGGTaGGGGTCCTGTCCACCTCTA +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIYWSCR*GSCPPL
Trigger: TAGAGGTGGACAGGACCCCCACCTGCAGCTCCAATA...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTATTGGAGCTGCAGGTaGGGGTCCTGTCCACCTCTA +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGYWSCR*GSCPPL
Trigger: TAGAGGTGGACAGGACCCCCACCTGCAGCTCCAATA...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTATATTGGAGCTGCAGGTaGGGGTCCTGTCCACCTCTA +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLYWSCR*GSCPPL
Trigger: TAGAGGTGGACAGGACCCCCACCTGCAGCTCCAATA...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAACTTTGTCTTGGAGTTaGGGGACAAGAGGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLTLSWS*GTRGSP
Trigger: GGGGGAGCCTCTTGTCCCCCAACTCCAAGACAAAGT...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTACTTTGTCTTGGAGTTaGGGGACAAGAGGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGTLSWS*GTRGSP
Trigger: GGGGGAGCCTCTTGTCCCCCAACTCCAAGACAAAGT...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAGAGCTTCTGAGCAGTTaGAGAGAGAGTTCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDIELLSS*RESSGG
Trigger: ACCTCCTGAACTCTCTCTCCAACTGCTCAGAAGCTC...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR TCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTATGGAGAGCATCCTCTaGAGCTGGCACACAATCAGC +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGMESIL*SWHTIS
Trigger: GCTGATTGTGTGCCAGCTTCAGAGGATGCTCTCCAT...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR TCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATACTACGTCTACCACTGTaGTGTCATCTCCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIILRLPL*CHLLAG
Trigger: CCCAGCAAGGAGATGACATCACAGTGGTAGACGTAG...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR TCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTACTACGTCTACCACTGTaGTGTCATCTCCTTGCTGGG +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLLRLPL*CHLLAG
Trigger: CCCAGCAAGGAGATGACATCACAGTGGTAGACGTAG...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTTTGCAATGGATTGCTaGAGGTGCTGCCGTTGCCTC +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGFAMDC*RCCRCL
Trigger: GAGGCAACGGCAGCACCTGCAGCAATCCATTGCAAA...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTTGCAATGGATTGCTaGAGGTGCTGCCGTTGCCTC +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIFAMDC*RCCRCL
Trigger: GAGGCAACGGCAGCACCTGCAGCAATCCATTGCAAA...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGATGTTTGCAATGGATTaGTGCAGGTGCTGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILMFAMD*CRCCRC
Trigger: GCAACGGCAGCACCTGCAGCAATCCATTGCAAACAT...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTACTGACATTGTGGGGCTaGTTGTCACAGGAAAGCACC +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLLTLWG*LSQEST
Trigger: GGTGCTTTCCTGTGACAAGCAGCCCCACAATGTCAG...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATACTGACATTGTGGGGCTaGTTGTCACAGGAAAGCACC +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIILTLWG*LSQEST
Trigger: GGTGCTTTCCTGTGACAAGCAGCCCCACAATGTCAG...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGCAATTTTATTGGAGCTaGAGGTGGGGGTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAEQFYWS*RWGSCP
Trigger: TGGACAGGACCCCCACCTGCAGCTCCAATAAAATTG...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGCAATTTTATTGGAGCTaGAGGTGGGGGTCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILQFYWS*RWGSCP
Trigger: TGGACAGGACCCCCACCTGCAGCTCCAATAAAATTG...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGCGGAAGGCCTCAATCTaGTTCTCTACGTCTACCACT +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILRKASI*FSTSTT
Trigger: AGTGGTAGACGTAGAGAAGCAGATTGAGGCCTTCCG...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGCTTTTGAAAGGGCTCTaGATCAGGGTTCAAGTCCGC +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILLLKGL*IRVQVR
Trigger: GCGGACTTGAACCCTGATGCAGAGCCCTTTCAAAAG...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTATTCTTGGCATTCAGTaGTTGGCAGGCCCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGILGIQ*LAGPQE
Trigger: CTCCTGAGGGCCTGCCAAGCACTGAATGCCAAGAAT...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGGTGCTTTTTGATTGCTaGTGCTGCTGCTGCTCCTAC +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAEVLFDC*CCCCSY
Trigger: GTAGGAGCAGCAGCAGCAGCAGCAATCAAAAAGCAC...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429602.7
ENST00000443967.5
CDS-3UTR GCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTCTCCCCATTCACCTCTaGCATGGTTGGAAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGLPIHL*HGWKLP
Trigger: AGGAAGCTTCCAACCATGGCAGAGGTGAATGGGGAG...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443967.5
CDS-3UTR CCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGCACCATGTTTGCAATaGATTGCTGCAGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLAPCLQ*IAAGAA
Trigger: GGCAGCACCTGCAGCAATCCATTGCAAACATGGTGC...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTGCACCATGTTTGCAATaGATTGCTGCAGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGAPCLQ*IAAGAA
Trigger: GGCAGCACCTGCAGCAATCCATTGCAAACATGGTGC...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATAGCACCATGTTTGCAATaGATTGCTGCAGGTGCTGCC +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIAPCLQ*IAAGAA
Trigger: GGCAGCACCTGCAGCAATCCATTGCAAACATGGTGC...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGACATCCCTGACATTGTaGGGCTGCTTGTCACAGGAA +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAETSLTL*GCLSQE
Trigger: TTCCTGTGACAAGCAGCCCCACAATGTCAGGGATGT...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAAAGGGTGGCTACTGCTaGCTTTCAAGATTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDIKGGYC*LSRFLF
Trigger: GAACAGGAATCTTGAAAGCCAGCAGTAGCCACCCTT...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTTTGTCAGGTTGGGCTaGGAAGAAGGGTGGCTACTG +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGFVRLG*EEGWLL
Trigger: CAGTAGCCACCCTTCTTCCCAGCCCAACCTGACAAA...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATACCACCTCTACGGCTATaGAGAGCATCCTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIPPLRL*RASSEA
Trigger: AGCTTCAGAGGATGCTCTCCATAGCCGTAGAGGTGG...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTCCACCTCTACGGCTATaGAGAGCATCCTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGPPLRL*RASSEA
Trigger: AGCTTCAGAGGATGCTCTCCATAGCCGTAGAGGTGG...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATCTCGGCAATTTTATTaGAGCTGCAGGTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIISRQFY*SCRWGS
Trigger: GGACCCCCACCTGCAGCTCCAATAAAATTGCCGAGA...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCTCGGCAATTTTATTaGAGCTGCAGGTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGSRQFY*SCRWGS
Trigger: GGACCCCCACCTGCAGCTCCAATAAAATTGCCGAGA...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTATCTCGGCAATTTTATTaGAGCTGCAGGTGGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLSRQFY*SCRWGS
Trigger: GGACCCCCACCTGCAGCTCCAATAAAATTGCCGAGA...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATATTGCAGCGCAGAAGGTaGCTTTCCATGGTAGTAAAG +
Preference number: 4 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDILQRRR*LSMVVK
Trigger: CTTTACTACCATGGAAAGCCACCTTCTGCGCTGCAA...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGAAGTGCACTTTGTCTTaGAGTTGGGGGACAAGAGGC +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILKCTLS*SWGTRG
Trigger: GCCTCTTGTCCCCCAACTCCAAGACAAAGTGCACTT...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATATTCAGGAGGTATTCTTaGCATTCAGTGCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDIFRRYS*HSVLGR
Trigger: CCTGCCAAGCACTGAATGCCAAGAATACCTCCTGAA...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGCCAAGTCTGTTGGCTTaGCTCAACTTGACTGTTGGG +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAEPSLLA*LNLTVG
Trigger: CCCAACAGTCAAGTTGAGCCAAGCCAACAGACTTGG...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332772.4
CDS-3UTR TCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGTGGCACACAATCAGCTaGTTGGTGTTCTTTGTCAGG +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAEWHTIS*LVFFVR
Trigger: CCTGACAAAGAACACCAATCAGCTGATTGTGTGCCA...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR TCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGATCTCTCCCTCTCACTaGACCTATCAACCTCAGGAT +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILISPSH*TYQPQD
Trigger: ATCCTGAGGTTGATAGGTTCAGTGAGAGGGAGAGAT...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332772.4
CDS-3UTR GCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTATGTTTGCAATGGATTaGTGCAGGTGCTGCCGTTGC +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGMFAMD*CRCCRC
Trigger: GCAACGGCAGCACCTGCAGCAATCCATTGCAAACAT...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGGAAAGCACCATGTTTaGAATGGATTGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILGKHHV*NGLLQV
Trigger: CACCTGCAGCAATCCATTGCAAACATGGTGCTTTCC...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGAAGAAGGGTGGCTACTaGTGGCTTTCAAGATTCCTG +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILKKGGY*WLSRFL
Trigger: CAGGAATCTTGAAAGCCAGCAGTAGCCACCCTTCTT...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGAAGAAGGGTGGCTACTaGTGGCTTTCAAGATTCCTG +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAEKKGGY*WLSRFL
Trigger: CAGGAATCTTGAAAGCCAGCAGTAGCCACCCTTCTT...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGATGTCATCTCCTTaGTGGGGTTTGGGCTTAATC +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILVMSSP*WGLGLI
Trigger: GATTAAGCCCAAACCCCAGCAAGGAGATGACATCAC...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGGTGATGTCATCTCCTTaGTGGGGTTTGGGCTTAATC +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAEVMSSP*WGLGLI
Trigger: GATTAAGCCCAAACCCCAGCAAGGAGATGACATCAC...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATACGGAAGGCCTCAATCTaGTTCTCTACGTCTACCACT +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIRKASI*FSTSTT
Trigger: AGTGGTAGACGTAGAGAAGCAGATTGAGGCCTTCCG...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTCGGAAGGCCTCAATCTaGTTCTCTACGTCTACCACT +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGRKASI*FSTSTT
Trigger: AGTGGTAGACGTAGAGAAGCAGATTGAGGCCTTCCG...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTCTTTTGAAAGGGCTCTaGATCAGGGTTCAAGTCCGC +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGLLKGL*IRVQVR
Trigger: GCGGACTTGAACCCTGATGCAGAGCCCTTTCAAAAG...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATACTTTTGAAAGGGCTCTaGATCAGGGTTCAAGTCCGC +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIILLKGL*IRVQVR
Trigger: GCGGACTTGAACCCTGATGCAGAGCCCTTTCAAAAG...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGTGCTCCTACTATTATTaGTTGTTGGGGAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAECSYYY*LLGRGS
Trigger: GCTCCCTCTCCCCAACAAGCAATAATAGTAGGAGCA...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429602.7
ENST00000443967.5
CDS-3UTR GCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGTGCTGCTGCTGCTGCTaGTCCTACTATTATTGCTTG +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAECCCCC*SYYYCL
Trigger: CAAGCAATAATAGTAGGAGCAGCAGCAGCAGCAGCA...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429602.7
ENST00000443967.5
CDS-3UTR GCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATACTTTTTGATTGCTGCTaGTGCTGCTGCTCCTACTAT +
Preference number: 4 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDILFDCC*CCCSYY
Trigger: ATAGTAGGAGCAGCAGCAGCAGCAGCAATCAAAAAG...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000429602.7
ENST00000443967.5
CDS-3UTR CCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAACATCCCTGACATTGTaGGGCTGCTTGTCACAGGAA +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLTSLTL*GCLSQE
Trigger: TTCCTGTGACAAGCAGCCCCACAATGTCAGGGATGT...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATACGTTTGATTTCCATTTaGGGGCTGAGTCAATCCATC +
Preference number: 4 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDIRLISI*GLSQSI
Trigger: GATGGATTGACTCAGCCCCCAAATGGAAATCAAACG...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGAAGGGTGGCTACTGCTaGCTTTCAAGATTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILKGGYC*LSRFLF
Trigger: GAACAGGAATCTTGAAAGCCAGCAGTAGCCACCCTT...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAAAGAACATTTCTCTCTaGCTCCTCTCAGGAATGTCC +
Preference number: 4 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDIKNISL*LLSGMS
Trigger: GGACATTCCTGAGAGGAGCCAGAGAGAAATGTTCTT...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGTTGCAGCGCAGAAGGTaGCTTTCCATGGTAGTAAAG +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAELQRRR*LSMVVK
Trigger: CTTTACTACCATGGAAAGCCACCTTCTGCGCTGCAA...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGTTGCAGCGCAGAAGGTaGCTTTCCATGGTAGTAAAG +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILLQRRR*LSMVVK
Trigger: CTTTACTACCATGGAAAGCCACCTTCTGCGCTGCAA...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTAAGTGCACTTTGTCTTaGAGTTGGGGGACAAGAGGC +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGKCTLS*SWGTRG
Trigger: GCCTCTTGTCCCCCAACTCCAAGACAAAGTGCACTT...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGACCAGAAGCAGATGCTaGTGCCATGCTTCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILTRSRC*CHASCS
Trigger: TGAACAAGAAGCATGGCACCAGCATCTGCTTCTGGT...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443967.5
CDS-3UTR TCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAGCTGGATGTAGCTGTTaGATTTTCATGAGAAGCATG +
Preference number: 4 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDIAGCSC*IFMRSM
Trigger: CATGCTTCTCATGAAAATTCAACAGCTACATCCAGC...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR TCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGTTTCCATTTGGGGGCTaGGTCAATCCATCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAEFPFGG*VNPSSV
Trigger: AACTGAAGATGGATTGACTCAGCCCCCAAATGGAAA...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR TCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGTTTCCATTTGGGGGCTaGGTCAATCCATCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILFPFGG*VNPSSV
Trigger: AACTGAAGATGGATTGACTCAGCCCCCAAATGGAAA...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR TCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTATGGCACACAATCAGCTaGTTGGTGTTCTTTGTCAGG +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLWHTIS*LVFFVR
Trigger: CCTGACAAAGAACACCAATCAGCTGATTGTGTGCCA...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR TCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATGGCACACAATCAGCTaGTTGGTGTTCTTTGTCAGG +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIWHTIS*LVFFVR
Trigger: CCTGACAAAGAACACCAATCAGCTGATTGTGTGCCA...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTGGAAAGCACCATGTTTaGAATGGATTGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGGKHHV*NGLLQV
Trigger: CACCTGCAGCAATCCATTGCAAACATGGTGCTTTCC...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGAAAGCACCATGTTTaGAATGGATTGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLGKHHV*NGLLQV
Trigger: CACCTGCAGCAATCCATTGCAAACATGGTGCTTTCC...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATAAAGAAGGGTGGCTACTaGTGGCTTTCAAGATTCCTG +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIKKGGY*WLSRFL
Trigger: CAGGAATCTTGAAAGCCAGCAGTAGCCACCCTTCTT...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGAATTCGTCCCAAGTCTaGCACTGGCTTTTATCTGAC +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILNSSQV*HWLLSD
Trigger: GTCAGATAAAAGCCAGTGGCAGACTTGGGACGAATT...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGAATTCGTCCCAAGTCTaGCACTGGCTTTTATCTGAC +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAENSSQV*HWLLSD
Trigger: GTCAGATAAAAGCCAGTGGCAGACTTGGGACGAATT...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTGTGATGTCATCTCCTTaGTGGGGTTTGGGCTTAATC +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGVMSSP*WGLGLI
Trigger: GATTAAGCCCAAACCCCAGCAAGGAGATGACATCAC...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGTGATGTCATCTCCTTaGTGGGGTTTGGGCTTAATC +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLVMSSP*WGLGLI
Trigger: GATTAAGCCCAAACCCCAGCAAGGAGATGACATCAC...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGAGGAGCTTCAACAAGTaGACTTTGTCTTGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAERSFNK*TLSWSW
Trigger: CCAACTCCAAGACAAAGTGCACTTGTTGAAGCTCCT...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATGCTCCTACTATTATTaGTTGTTGGGGAGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIICSYYY*LLGRGS
Trigger: GCTCCCTCTCCCCAACAAGCAATAATAGTAGGAGCA...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429602.7
ENST00000443967.5
CDS-3UTR GCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTGCTGCTGCTGCTGCTaGTCCTACTATTATTGCTTG +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGCCCCC*SYYYCL
Trigger: CAAGCAATAATAGTAGGAGCAGCAGCAGCAGCAGCA...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000429602.7
ENST00000443967.5
CDS-3UTR GCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATAGATTGCTGCTGCTGCTaGTGCTCCTACTATTATTGC +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIDCCCC*CSYYYC
Trigger: GCAATAATAGTAGGAGCAGCAGCAGCAGCAGCAATC...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429602.7
ENST00000443967.5
CDS-3UTR GCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGCTTTTTGATTGCTGCTaGTGCTGCTGCTCCTACTAT +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAELFDCC*CCCSYY
Trigger: ATAGTAGGAGCAGCAGCAGCAGCAGCAATCAAAAAG...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429602.7
ENST00000443967.5
CDS-3UTR CCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGCGTTTGATTTCCATTTaGGGGCTGAGTCAATCCATC +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILRLISI*GLSQSI
Trigger: GATGGATTGACTCAGCCCCCAAATGGAAATCAAACG...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGCGTTTGATTTCCATTTaGGGGCTGAGTCAATCCATC +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAERLISI*GLSQSI
Trigger: GATGGATTGACTCAGCCCCCAAATGGAAATCAAACG...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATAAAGGGTGGCTACTGCTaGCTTTCAAGATTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIKGGYC*LSRFLF
Trigger: GAACAGGAATCTTGAAAGCCAGCAGTAGCCACCCTT...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTAAGGGTGGCTACTGCTaGCTTTCAAGATTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGKGGYC*LSRFLF
Trigger: GAACAGGAATCTTGAAAGCCAGCAGTAGCCACCCTT...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAACACAATCAGCTGATTaGTGTTCTTTGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDITQSAD*CSLSGW
Trigger: CCAACCTGACAAAGAACACCAATCAGCTGATTGTGT...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGCAGCGCAGAAGGTaGCTTTCCATGGTAGTAAAG +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIILQRRR*LSMVVK
Trigger: CTTTACTACCATGGAAAGCCACCTTCTGCGCTGCAA...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTTGCAGCGCAGAAGGTaGCTTTCCATGGTAGTAAAG +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGLQRRR*LSMVVK
Trigger: CTTTACTACCATGGAAAGCCACCTTCTGCGCTGCAA...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGATGTCATCTCCTTGCTaGGGTTTGGGCTTAATCCTT +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAEMSSPC*GLGLIL
Trigger: AAGGATTAAGCCCAAACCCCAGCAAGGAGATGACAT...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTTCAGGAGGTATTCTTaGCATTCAGTGCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGFRRYS*HSVLGR
Trigger: CCTGCCAAGCACTGAATGCCAAGAATACCTCCTGAA...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTATTCAGGAGGTATTCTTaGCATTCAGTGCTTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLFRRYS*HSVLGR
Trigger: CCTGCCAAGCACTGAATGCCAAGAATACCTCCTGAA...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTATTTAAGAGGCAGCCATaGGAAGTCAATCTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLFKRQP*EVNLSL
Trigger: GAGGGAGAGATTGACTTCCCATGGCTGCCTCTTAAA...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332772.4
CDS-3UTR TCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGCTGGATGTAGCTGTTaGATTTTCATGAGAAGCATG +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILAGCSC*IFMRSM
Trigger: CATGCTTCTCATGAAAATTCAACAGCTACATCCAGC...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR TCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTTCCATTTGGGGGCTaGGTCAATCCATCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIFPFGG*VNPSSV
Trigger: AACTGAAGATGGATTGACTCAGCCCCCAAATGGAAA...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR TCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTATTTCCATTTGGGGGCTaGGTCAATCCATCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLFPFGG*VNPSSV
Trigger: AACTGAAGATGGATTGACTCAGCCCCCAAATGGAAA...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR TCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATACAAGATTCCTGTTCCTaGAGACGTTTGATTTCCATT +
Preference number: 4 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDIQDSCS*RRLISI
Trigger: AATGGAAATCAAACGTCTTCAGGAACAGGAATCTTG...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTAATTCGTCCCAAGTCTaGCACTGGCTTTTATCTGAC +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGNSSQV*HWLLSD
Trigger: GTCAGATAAAAGCCAGTGGCAGACTTGGGACGAATT...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATAAATTCGTCCCAAGTCTaGCACTGGCTTTTATCTGAC +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIINSSQV*HWLLSD
Trigger: GTCAGATAAAAGCCAGTGGCAGACTTGGGACGAATT...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAAGGAGCTTCAACAAGTaGACTTTGTCTTGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLRSFNK*TLSWSW
Trigger: CCAACTCCAAGACAAAGTGCACTTGTTGAAGCTCCT...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATAAGGAGCTTCAACAAGTaGACTTTGTCTTGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIRSFNK*TLSWSW
Trigger: CCAACTCCAAGACAAAGTGCACTTGTTGAAGCTCCT...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATAATGAACTTCCAGTCATaGGAGCTGATTGAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIMNFQS*ELIEPS
Trigger: ACTTGGCTCAATCAGCTCGCATGACTGGAAGTTCAT...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332772.4
CDS-3UTR CCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTCGTTTGATTTCCATTTaGGGGCTGAGTCAATCCATC +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGRLISI*GLSQSI
Trigger: GATGGATTGACTCAGCCCCCAAATGGAAATCAAACG...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGACACAATCAGCTGATTaGTGTTCTTTGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAETQSAD*CSLSGW
Trigger: CCAACCTGACAAAGAACACCAATCAGCTGATTGTGT...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGACACAATCAGCTGATTaGTGTTCTTTGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILTQSAD*CSLSGW
Trigger: CCAACCTGACAAAGAACACCAATCAGCTGATTGTGT...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAAAGAACATTTCTCTCTaGCTCCTCTCAGGAATGTCC +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLKNISL*LLSGMS
Trigger: GGACATTCCTGAGAGGAGCCAGAGAGAAATGTTCTT...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTAAGAACATTTCTCTCTaGCTCCTCTCAGGAATGTCC +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGKNISL*LLSGMS
Trigger: GGACATTCCTGAGAGGAGCCAGAGAGAAATGTTCTT...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATAAAGAACATTTCTCTCTaGCTCCTCTCAGGAATGTCC +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIKNISL*LLSGMS
Trigger: GGACATTCCTGAGAGGAGCCAGAGAGAAATGTTCTT...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTATGTCATCTCCTTGCTaGGGTTTGGGCTTAATCCTT +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGMSSPC*GLGLIL
Trigger: AAGGATTAAGCCCAAACCCCAGCAAGGAGATGACAT...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAATGTCATCTCCTTGCTaGGGTTTGGGCTTAATCCTT +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLMSSPC*GLGLIL
Trigger: AAGGATTAAGCCCAAACCCCAGCAAGGAGATGACAT...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR TCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTGCTGGATGTAGCTGTTaGATTTTCATGAGAAGCATG +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGAGCSC*IFMRSM
Trigger: CATGCTTCTCATGAAAATTCAACAGCTACATCCAGC...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR TCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATAGCTGGATGTAGCTGTTaGATTTTCATGAGAAGCATG +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIAGCSC*IFMRSM
Trigger: CATGCTTCTCATGAAAATTCAACAGCTACATCCAGC...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR TCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGCAAGATTCCTGTTCCTaGAGACGTTTGATTTCCATT +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAEQDSCS*RRLISI
Trigger: AATGGAAATCAAACGTCTTCAGGAACAGGAATCTTG...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATCCATCTTCAGTTACTaGTTTGACCAGCCACTTGAT +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIISIFSY*FDQPLD
Trigger: ATCAAGTGGCTGGTCAAAGCAGTAACTGAAGATGGA...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTATCCATCTTCAGTTACTaGTTTGACCAGCCACTTGAT +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLSIFSY*FDQPLD
Trigger: ATCAAGTGGCTGGTCAAAGCAGTAACTGAAGATGGA...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAACACAATCAGCTGATTaGTGTTCTTTGTCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLTQSAD*CSLSGW
Trigger: CCAACCTGACAAAGAACACCAATCAGCTGATTGTGT...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAAAACATGTTGATAACTaGACAGCAGAAACTGCAGAT +
Preference number: 4 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDIKHVDN*TAETAD
Trigger: ATCTGCAGTTTCTGCTGTCCAGTTATCAACATGTTT...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
3UTR CAA 72 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTaGAATGACATAATATTGGTGTATAGACTAGGTTCA +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGT*NDIILVYRLGS
Trigger: TGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR TCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATACAAGATTCCTGTTCCTaGAGACGTTTGATTTCCATT +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIQDSCS*RRLISI
Trigger: AATGGAAATCAAACGTCTTCAGGAACAGGAATCTTG...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR TCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTATTTAAGCCATATTTaGGAACAGGCTAGGATAGGA +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGYLSHI*EQARIG
Trigger: TCCTATCCTAGCCTGTTCTCAAATATGGCTTAAATA...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000443967.5
CDS-3UTR TCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTATATTTAAGCCATATTTaGGAACAGGCTAGGATAGGA +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLYLSHI*EQARIG
Trigger: TCCTATCCTAGCCTGTTCTCAAATATGGCTTAAATA...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000443967.5
CDS-3UTR GCA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGATAGGTCTAACAGAATaGTTGCATTTCATTAGGGAA +
Preference number: 4 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILIGLTE*LHFIRE
Trigger: TTCCCTAATGAAATGCAAGCATTCTGTTAGACCTAT...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGATAGGTCTAACAGAATaGTTGCATTTCATTAGGGAA +
Preference number: 4 (lower is better)
Translates to: VVGTLNDIILVYRLGSAEIGLTE*LHFIRE
Trigger: TTCCCTAATGAAATGCAAGCATTCTGTTAGACCTAT...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAAAACATGTTGATAACTaGACAGCAGAAACTGCAGAT +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLKHVDN*TAETAD
Trigger: ATCTGCAGTTTCTGCTGTCCAGTTATCAACATGTTT...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATAAAACATGTTGATAACTaGACAGCAGAAACTGCAGAT +
Preference number: 4 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIKHVDN*TAETAD
Trigger: ATCTGCAGTTTCTGCTGTCCAGTTATCAACATGTTT...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTCAGAGAAAGAGAAACTaGTTCTTTAATGACTCCTGT +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGQRKRN*FFNDSC
Trigger: ACAGGAGTCATTAAAGAACCAGTTTCTCTTTCTCTG...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332772.4
CDS-3UTR GCA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAATAGGTCTAACAGAATaGTTGCATTTCATTAGGGAA +
Preference number: 4 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLIGLTE*LHFIRE
Trigger: TTCCCTAATGAAATGCAAGCATTCTGTTAGACCTAT...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR GCA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTATAGGTCTAACAGAATaGTTGCATTTCATTAGGGAA +
Preference number: 4 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGIGLTE*LHFIRE
Trigger: TTCCCTAATGAAATGCAAGCATTCTGTTAGACCTAT...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS GCA 90 bp GCTTGGGGGACAAATGCTGGAGGGTTCTATTCAGCCATCTTGCTCTaGCTTCCCTGCTTGTTCTTGAACACGGTCCGGCGGGGCAGCGCG +
Preference number: 5 (lower is better)
Translates to: AWGTNAGGFYSAILL*LPCLFLNTVRRGSA
Trigger: CGCGCTGCCCCGCCGGACCGTGTTCAAGAACAAGCAGGGAAGGCAGAGCAAGATGGCTGAATAGAACCCTCCAGCATTTGTCCCCCAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508769.1
CDS GCA 90 bp GGCTCCCCCAGCATCTGGATCAGGCGGCTGCGGAAGGCCTCAATCTaGTTCTCTACGTCTACCACTGTGATGTCATCTCCTTGCTGGGGT +
Preference number: 5 (lower is better)
Translates to: GSPSIWIRRLRKASI*FSTSTTVMSSPCWG
Trigger: ACCCCAGCAAGGAGATGACATCACAGTGGTAGACGTAGAGAAGCAGATTGAGGCCTTCCGCAGCCGCCTGATCCAGATGCTGGGGGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS GCA 90 bp CTTGGCAGGCCCTCAGGAGCCGCTCCAGCCCTTTTGAAAGGGCTCTaGATCAGGGTTCAAGTCCGCAGCATAGAAGAGCAGGAGCTTCAA +
Preference number: 5 (lower is better)
Translates to: LGRPSGAAPALLKGL*IRVQVRSIEEQELQ
Trigger: TTGAAGCTCCTGCTCTTCTATGCTGCGGACTTGAACCCTGATGCAGAGCCCTTTCAAAAGGGCTGGAGCGGCTCCTGAGGGCCTGCCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS CCA 90 bp GCCTGGGCCAGAGACAGAGGCAGGCGGGTGGGTGTCTCACAGCTGTaGAGGAATATGATTTCTAACACTTTGCAGCGCAGAAGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: AWARDRGRRVGVSQL*RNMISNTLQRRRWL
Trigger: AAGCCACCTTCTGCGCTGCAAAGTGTTAGAAATCATATTCCTCCACAGCTGTGAGACACCCACCCGCCTGCCTCTGTCTCTGGCCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS CCA 90 bp GCAGTTGGAGAGAGAGTTCAGGAGGTATTCTTGGCATTCAGTGCTTaGCAGGCCCTCAGGAGCCGCTCCAGCCCTTTTGAAAGGGCTCTG +
Preference number: 5 (lower is better)
Translates to: AVGERVQEVFLAFSA*QALRSRSSPFERAL
Trigger: CAGAGCCCTTTCAAAAGGGCTGGAGCGGCTCCTGAGGGCCTGCCAAGCACTGAATGCCAAGAATACCTCCTGAACTCTCTCTCCAACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS CCA 90 bp CCCAAGAGCCCCAGGAAAGAGAACTGCCTGCCCCTTACAGCTGATTaGTGTTCTTTGTCAGGTTGGGCTGGGAAGAAGGGTGGCTACTGC +
Preference number: 5 (lower is better)
Translates to: PKSPRKENCLPLTAD*CSLSGWAGKKGGYC
Trigger: GCAGTAGCCACCCTTCTTCCCAGCCCAACCTGACAAAGAACACCAATCAGCTGTAAGGGGCAGGCAGTTCTCTTTCCTGGGGCTCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481515.1
CDS CCA 90 bp TTTAGAGCTTCTGAGCAGTTGGAGAGAGAGTTCAGGAGGTATTCTTaGCATTCAGTGCTTGGCAGGCCCTCAGGAGCCGCTCCAGCCCTT +
Preference number: 5 (lower is better)
Translates to: FRASEQLEREFRRYS*HSVLGRPSGAAPAL
Trigger: AAGGGCTGGAGCGGCTCCTGAGGGCCTGCCAAGCACTGAATGCCAAGAATACCTCCTGAACTCTCTCTCCAACTGCTCAGAAGCTCTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS GCA 90 bp TGTCCAGCACAAACCCAAACATCATCTCGGCAATTTTATTGGAGCTaGAGGTGGGGGTCCTGTCCACCTCTACGGCTATGGAGAGCATCC +
Preference number: 5 (lower is better)
Translates to: CPAQTQTSSRQFYWS*RWGSCPPLRLWRAS
Trigger: GGATGCTCTCCATAGCCGTAGAGGTGGACAGGACCCCCACCTGCAGCTCCAATAAAATTGCCGAGATGATGTTTGGGTTTGTGCTGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS GCA 90 bp CATGGTTGGAAGCTTCCTGAGGTCCTCACCAGAAGCAGATGCTGGTaGCATGCTTCTTGTTCAGCCTGTAATCCCAGCTACTCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: HGWKLPEVLTRSRCW*HASCSACNPSYSGS
Trigger: GCTTCCTGAGTAGCTGGGATTACAGGCTGAACAAGAAGCATGGCACCAGCATCTGCTTCTGGTGAGGACCTCAGGAAGCTTCCAACCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443967.5
CDS GCA 90 bp CTCTGCCATGGTTGGAAGCTTCCTGAGGTCCTCACCAGAAGCAGATaGTGGTGCCATGCTTCTTGTTCAGCCTGTAATCCCAGCTACTCA +
Preference number: 5 (lower is better)
Translates to: LCHGWKLPEVLTRSR*WCHASCSACNPSYS
Trigger: TGAGTAGCTGGGATTACAGGCTGAACAAGAAGCATGGCACCAGCATCTGCTTCTGGTGAGGACCTCAGGAAGCTTCCAACCATGGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443967.5
CDS CCA 90 bp TTTTATTGGAGCTGCAGGTGGGGGTCCTGTCCACCTCTACGGCTATaGAGAGCATCCTCTGAAGCTGGCACACAATCAGCTGATTGGTGT +
Preference number: 5 (lower is better)
Translates to: FYWSCRWGSCPPLRL*RASSEAGTQSADWC
Trigger: ACACCAATCAGCTGATTGTGTGCCAGCTTCAGAGGATGCTCTCCATAGCCGTAGAGGTGGACAGGACCCCCACCTGCAGCTCCAATAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS CCA 90 bp TGCCATGGTTGGAAGCTTCCTGAGGTCCTCACCAGAAGCAGATGCTaGTGCCATGCTTCTTGTTCAGCCTGTAATCCCAGCTACTCAGGA +
Preference number: 5 (lower is better)
Translates to: CHGWKLPEVLTRSRC*CHASCSACNPSYSG
Trigger: TCCTGAGTAGCTGGGATTACAGGCTGAACAAGAAGCATGGCACCAGCATCTGCTTCTGGTGAGGACCTCAGGAAGCTTCCAACCATGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443967.5
CDS CCA 90 bp GAGAACTGCCTGCCCCTTACAGCTGATTGGTGTTCTTTGTCAGGTTaGGCTGGGAAGAAGGGTGGCTACTGCTGGCTTTCAAGATTCCTG +
Preference number: 5 (lower is better)
Translates to: ENCLPLTADWCSLSG*AGKKGGYCWLSRFL
Trigger: CAGGAATCTTGAAAGCCAGCAGTAGCCACCCTTCTTCCCAGCCCAACCTGACAAAGAACACCAATCAGCTGTAAGGGGCAGGCAGTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481515.1
CDS CCA 90 bp CAGGAATGTCCAGCACAAACCCAAACATCATCTCGGCAATTTTATTaGAGCTGCAGGTGGGGGTCCTGTCCACCTCTACGGCTATGGAGA +
Preference number: 5 (lower is better)
Translates to: QECPAQTQTSSRQFY*SCRWGSCPPLRLWR
Trigger: TCTCCATAGCCGTAGAGGTGGACAGGACCCCCACCTGCAGCTCCAATAAAATTGCCGAGATGATGTTTGGGTTTGTGCTGGACATTCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS CCA 90 bp TCTGAAGCTGGCACACAATCAGCTGATTGGTGTTCTTTGTCAGGTTaGGCTGGGAAGAAGGGTGGCTACTGCTGGCTTTCAAGATTCCTG +
Preference number: 5 (lower is better)
Translates to: SEAGTQSADWCSLSG*AGKKGGYCWLSRFL
Trigger: CAGGAATCTTGAAAGCCAGCAGTAGCCACCCTTCTTCCCAGCCCAACCTGACAAAGAACACCAATCAGCTGATTGTGTGCCAGCTTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGCTGCAGGTGCTGCCGTaGCCTCCTCAGGGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: VVGTLNDIILVYRLGSAELQVLP*PPQGLL
Trigger: CAGCAGACCCTGAGGAGGCAACGGCAGCACCTGCAG...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTACTGCAGGTGCTGCCGTaGCCTCCTCAGGGTCTGCTG +
Preference number: 5 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLLQVLP*PPQGLL
Trigger: CAGCAGACCCTGAGGAGGCAACGGCAGCACCTGCAG...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS TCA 90 bp CTGGGAAGAAGGGTGGCTACTGCTGGCTTTCAAGATTCCTGTTCCTaGAGACGTTTGATTTCCATTTGGGGGCTGAGTCAATCCATCTTC +
Preference number: 5 (lower is better)
Translates to: LGRRVATAGFQDSCS*RRLISIWGLSQSIF
Trigger: GAAGATGGATTGACTCAGCCCCCAAATGGAAATCAAACGTCTTCAGGAACAGGAATCTTGAAAGCCAGCAGTAGCCACCCTTCTTCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
ENST00000481515.1
CDS GCA 90 bp GATCAAACCGCCATGATGTCCACTCTACTGATGAACTTCCAGTCATaGGAGCTGATTGAGCCAAGTCTGTTGGCTTGGCTCAACTTGACT +
Preference number: 5 (lower is better)
Translates to: DQTAMMSTLLMNFQS*ELIEPSLLAWLNLT
Trigger: AGTCAAGTTGAGCCAAGCCAACAGACTTGGCTCAATCAGCTCGCATGACTGGAAGTTCATCAGTAGAGTGGACATCATGGCGGTTTGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332772.4
CDS CCA 90 bp GTGGATAGTTGTTCAAGTTGGTGTTCTTGCTTGGGGGACAAATGCTaGAGGGTTCTATTCAGCCATCTTGCTCTGCCTTCCCTGCTTGTT +
Preference number: 5 (lower is better)
Translates to: VDSCSSWCSCLGDKC*RVLFSHLALPSLLV
Trigger: AACAAGCAGGGAAGGCAGAGCAAGATGGCTGAATAGAACCCTCCAGCATTTGTCCCCCAAGCAAGAACACCAACTTGAACAACTATCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503595.1
ENST00000508769.1
CDS-3UTR CAA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATACACTTTGTCTTGGAGTaGGGGGACAAGAGGCTCCCC +
Preference number: 5 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDIHFVLE*GDKRLP
Trigger: GGGGAGCCTCTTGTCCCCCAACTCCAAGACAAAGTG...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGCCGCTCCAGCCCTTTaGAAAGGGCTCTGCATCAGG +
Preference number: 5 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILAAPAL*KGLCIR
Trigger: CCTGATGCAGAGCCCTTTCAAAAGGGCTGGAGCGGC...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS GCA 90 bp CGTTTGATTTCCATTTGGGGGCTGAGTCAATCCATCTTCAGTTACTaGTTTGACCAGCCACTTGATAACATCCCTGACATTGTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: RLISIWGLSQSIFSY*FDQPLDNIPDIVGL
Trigger: CAGCCCCACAATGTCAGGGATGTTATCAAGTGGCTGGTCAAAGCAGTAACTGAAGATGGATTGACTCAGCCCCCAAATGGAAATCAAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
ENST00000481515.1
CDS GCA 90 bp GATTGGTGTTCTTTGTCAGGTTGGGCTGGGAAGAAGGGTGGCTACTaGTGGCTTTCAAGATTCCTGTTCCTGAAGACGTTTGATTTCCAT +
Preference number: 5 (lower is better)
Translates to: DWCSLSGWAGKKGGY*WLSRFLFLKTFDFH
Trigger: ATGGAAATCAAACGTCTTCAGGAACAGGAATCTTGAAAGCCAGCAGTAGCCACCCTTCTTCCCAGCCCAACCTGACAAAGAACACCAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
ENST00000481515.1
CDS-3UTR CAA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGTCGCCCAGGCAGAGTTaGTCCCTCTTCCTCCATGAC +
Preference number: 5 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILSPRQS*SLFLHD
Trigger: GTCATGGAGGAAGAGGGACAAACTCTGCCTGGGCGA...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTGCCGCTCCAGCCCTTTaGAAAGGGCTCTGCATCAGG +
Preference number: 5 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGAAPAL*KGLCIR
Trigger: CCTGATGCAGAGCCCTTTCAAAAGGGCTGGAGCGGC...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGCCGCTCCAGCCCTTTaGAAAGGGCTCTGCATCAGG +
Preference number: 5 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLAAPAL*KGLCIR
Trigger: CCTGATGCAGAGCCCTTTCAAAAGGGCTGGAGCGGC...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS CCA 90 bp AAGTGCTTTCTTGTGTGGATAGTTGTTCAAGTTGGTGTTCTTGCTTaGGGGACAAATGCTGGAGGGTTCTATTCAGCCATCTTGCTCTGC +
Preference number: 5 (lower is better)
Translates to: KCFLVWIVVQVGVLA*GTNAGGFYSAILLC
Trigger: GCAGAGCAAGATGGCTGAATAGAACCCTCCAGCATTTGTCCCCCAAGCAAGAACACCAACTTGAACAACTATCCACACAAGAAAGCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503595.1
ENST00000508769.1
CDS-3UTR CAA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCGCCCAGGCAGAGTTaGTCCCTCTTCCTCCATGAC +
Preference number: 5 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGSPRQS*SLFLHD
Trigger: GTCATGGAGGAAGAGGGACAAACTCTGCCTGGGCGA...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATCGCCCAGGCAGAGTTaGTCCCTCTTCCTCCATGAC +
Preference number: 5 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIISPRQS*SLFLHD
Trigger: GTCATGGAGGAAGAGGGACAAACTCTGCCTGGGCGA...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTCACTTTGTCTTGGAGTaGGGGGACAAGAGGCTCCCC +
Preference number: 5 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGHFVLE*GDKRLP
Trigger: GGGGAGCCTCTTGTCCCCCAACTCCAAGACAAAGTG...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTACACTTTGTCTTGGAGTaGGGGGACAAGAGGCTCCCC +
Preference number: 5 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLHFVLE*GDKRLP
Trigger: GGGGAGCCTCTTGTCCCCCAACTCCAAGACAAAGTG...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGCATGTTTGCAATGGATaGCTGCAGGTGCTGCCGTTG +
Preference number: 5 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILHVCNG*LQVLPL
Trigger: CAACGGCAGCACCTGCAGCAATCCATTGCAAACATG...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGACATTGTGGGGCTGCTaGTCACAGGAAAGCACCATG +
Preference number: 5 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILTLWGC*SQESTM
Trigger: CATGGTGCTTTCCTGTGACAAGCAGCCCCACAATGT...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATAACATCCCTGACATaGTGGGGCTGCTTGTCACAG +
Preference number: 5 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDIITSLT*WGCLSQ
Trigger: CTGTGACAAGCAGCCCCACAATGTCAGGGATGTTAT...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGATCTCGGCAATTTTATaGGAGCTGCAGGTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: VVGTLNDIILVYRLGSAEISAIL*ELQVGV
Trigger: GACCCCCACCTGCAGCTCCAATAAAATTGCCGAGAT...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGCAAGTGCACTTTGTCTaGGAGTTGGGGGACAAGAGG +
Preference number: 5 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILQVHFV*ELGDKR
Trigger: CCTCTTGTCCCCCAACTCCAAGACAAAGTGCACTTG...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAGTTCAGGAGGTATTCTaGGCATTCAGTGCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDIVQEVF*AFSAWQ
Trigger: CTGCCAAGCACTGAATGCCAAGAATACCTCCTGAAC...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS CCA 90 bp GACTCGAGGTTAACAAAACTCACACTACACACCACTCCTTCTCTATaGCAACAGATATCTGAAGTGATGAGGAGCTGTAACCCTTTACTG +
Preference number: 5 (lower is better)
Translates to: DSRLTKLTLHTTPSL*QQISEVMRSCNPLL
Trigger: CAGTAAAGGGTTACAGCTCCTCATCACTTCAGATATCTGTTGCCATAGAGAAGGAGTGGTGTGTAGTGTGAGTTTTGTTAACCTCGAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481515.1
CDS-3UTR CAA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTACATGTTTGCAATGGATaGCTGCAGGTGCTGCCGTTG +
Preference number: 5 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLHVCNG*LQVLPL
Trigger: CAACGGCAGCACCTGCAGCAATCCATTGCAAACATG...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTCATGTTTGCAATGGATaGCTGCAGGTGCTGCCGTTG +
Preference number: 5 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGHVCNG*LQVLPL
Trigger: CAACGGCAGCACCTGCAGCAATCCATTGCAAACATG...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATAACATTGTGGGGCTGCTaGTCACAGGAAAGCACCATG +
Preference number: 5 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIITLWGC*SQESTM
Trigger: CATGGTGCTTTCCTGTGACAAGCAGCCCCACAATGT...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTACATTGTGGGGCTGCTaGTCACAGGAAAGCACCATG +
Preference number: 5 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGTLWGC*SQESTM
Trigger: CATGGTGCTTTCCTGTGACAAGCAGCCCCACAATGT...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAGCTTTGACCAGCCACTaGATAACATCCCTGACATTG +
Preference number: 5 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDIALTSH*ITSLTL
Trigger: CAATGTCAGGGATGTTATCAAGTGGCTGGTCAAAGC...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATAATCTCGGCAATTTTATaGGAGCTGCAGGTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIISAIL*ELQVGV
Trigger: GACCCCCACCTGCAGCTCCAATAAAATTGCCGAGAT...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAATCTCGGCAATTTTATaGGAGCTGCAGGTGGGGGTC +
Preference number: 5 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLISAIL*ELQVGV
Trigger: GACCCCCACCTGCAGCTCCAATAAAATTGCCGAGAT...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTACAAGTGCACTTTGTCTaGGAGTTGGGGGACAAGAGG +
Preference number: 5 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLQVHFV*ELGDKR
Trigger: CCTCTTGTCCCCCAACTCCAAGACAAAGTGCACTTG...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTCAAGTGCACTTTGTCTaGGAGTTGGGGGACAAGAGG +
Preference number: 5 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGQVHFV*ELGDKR
Trigger: CCTCTTGTCCCCCAACTCCAAGACAAAGTGCACTTG...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATACAAGTGCACTTTGTCTaGGAGTTGGGGGACAAGAGG +
Preference number: 5 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIQVHFV*ELGDKR
Trigger: CCTCTTGTCCCCCAACTCCAAGACAAAGTGCACTTG...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATATTCAACAAGTGCACTTaGTCTTGGAGTTGGGGGACA +
Preference number: 5 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDIFNKCT*SWSWGT
Trigger: TGTCCCCCAACTCCAAGACAAAGTGCACTTGTTGAA...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS TCA 90 bp TTTGATTTAAGAGGCAGCCATGGGAAGTCAATCTCTCCCTCTCACTaGACCTATCAACCTCAGGATATACCCAAAACTACAGATGGCAAA +
Preference number: 5 (lower is better)
Translates to: FDLRGSHGKSISPSH*TYQPQDIPKTTDGK
Trigger: TTTGCCATCTGTAGTTTTGGGTATATCCTGAGGTTGATAGGTTCAGTGAGAGGGAGAGATTGACTTCCCATGGCTGCCTCTTAAATCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332772.4
CDS-3UTR CAA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAATAACATCCCTGACATaGTGGGGCTGCTTGTCACAG +
Preference number: 5 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLITSLT*WGCLSQ
Trigger: CTGTGACAAGCAGCCCCACAATGTCAGGGATGTTAT...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGGCTTTGACCAGCCACTaGATAACATCCCTGACATTG +
Preference number: 5 (lower is better)
Translates to: VVGTLNDIILVYRLGSAEALTSH*ITSLTL
Trigger: CAATGTCAGGGATGTTATCAAGTGGCTGGTCAAAGC...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGCTTTGACCAGCCACTaGATAACATCCCTGACATTG +
Preference number: 5 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILALTSH*ITSLTL
Trigger: CAATGTCAGGGATGTTATCAAGTGGCTGGTCAAAGC...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATGATTTCTAACACTTaGCAGCGCAGAAGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDIMISNT*QRRRWL
Trigger: AAGCCACCTTCTGCGCTGCAAAGTGTTAGAAATCAT...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATATCTCCTTGCTGGGGTTaGGGCTTAATCCTTTTGATT +
Preference number: 5 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDISPCWG*GLILLI
Trigger: AATCAAAAGGATTAAGCCCAAACCCCAGCAAGGAGA...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGTGTGATGTCATCTCCTaGCTGGGGTTTGGGCTTAAT +
Preference number: 5 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILCDVIS*LGFGLN
Trigger: ATTAAGCCCAAACCCCAGCAAGGAGATGACATCACA...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGTTCAACAAGTGCACTTaGTCTTGGAGTTGGGGGACA +
Preference number: 5 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILFNKCT*SWSWGT
Trigger: TGTCCCCCAACTCCAAGACAAAGTGCACTTGTTGAA...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTGTTCAGGAGGTATTCTaGGCATTCAGTGCTTGGCAG +
Preference number: 5 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGVQEVF*AFSAWQ
Trigger: CTGCCAAGCACTGAATGCCAAGAATACCTCCTGAAC...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATCGCCCAGGCAGAGTTaGTCCCTTATAAGGTTTCAG +
Preference number: 5 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIISPRQS*SLIRFQ
Trigger: CTGAAACCTTATAAGGGACAAACTCTGCCTGGGCGA...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332772.4
CDS-3UTR CAA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATACTGCTCCTACTATTATaGCTTGTTGGGGAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIILLLLL*LVGERE
Trigger: CTCCCTCTCCCCAACAAGCAATAATAGTAGGAGCAG...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000429602.7
ENST00000443967.5
CDS-3UTR CAA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTCTGCTCCTACTATTATaGCTTGTTGGGGAGAGGGAG +
Preference number: 5 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGLLLLL*LVGERE
Trigger: CTCCCTCTCCCCAACAAGCAATAATAGTAGGAGCAG...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429602.7
ENST00000443967.5
CDS-3UTR CAA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTGCTTTGACCAGCCACTaGATAACATCCCTGACATTG +
Preference number: 5 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGALTSH*ITSLTL
Trigger: CAATGTCAGGGATGTTATCAAGTGGCTGGTCAAAGC...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATATCTTCAGTTACTGCTTaGACCAGCCACTTGATAACA +
Preference number: 5 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDISSVTA*TSHLIT
Trigger: TGTTATCAAGTGGCTGGTCAAAGCAGTAACTGAAGA...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGACGTTTGATTTCCATTaGGGGGCTGAGTCAATCCAT +
Preference number: 5 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILTFDFH*GAESIH
Trigger: ATGGATTGACTCAGCCCCCAAATGGAAATCAAACGT...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGATGATTTCTAACACTTaGCAGCGCAGAAGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILMISNT*QRRRWL
Trigger: AAGCCACCTTCTGCGCTGCAAAGTGTTAGAAATCAT...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGATGATTTCTAACACTTaGCAGCGCAGAAGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: VVGTLNDIILVYRLGSAEMISNT*QRRRWL
Trigger: AAGCCACCTTCTGCGCTGCAAAGTGTTAGAAATCAT...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGTCTCCTTGCTGGGGTTaGGGCTTAATCCTTTTGATT +
Preference number: 5 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILSPCWG*GLILLI
Trigger: AATCAAAAGGATTAAGCCCAAACCCCAGCAAGGAGA...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTATGTGATGTCATCTCCTaGCTGGGGTTTGGGCTTAAT +
Preference number: 5 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLCDVIS*LGFGLN
Trigger: ATTAAGCCCAAACCCCAGCAAGGAGATGACATCACA...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTGTGATGTCATCTCCTaGCTGGGGTTTGGGCTTAAT +
Preference number: 5 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGCDVIS*LGFGLN
Trigger: ATTAAGCCCAAACCCCAGCAAGGAGATGACATCACA...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTATTCAACAAGTGCACTTaGTCTTGGAGTTGGGGGACA +
Preference number: 5 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLFNKCT*SWSWGT
Trigger: TGTCCCCCAACTCCAAGACAAAGTGCACTTGTTGAA...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTCAACAAGTGCACTTaGTCTTGGAGTTGGGGGACA +
Preference number: 5 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIFNKCT*SWSWGT
Trigger: TGTCCCCCAACTCCAAGACAAAGTGCACTTGTTGAA...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATACAGGTTGTCGGTACCTaGAATGACATAATATTGGTG +
Preference number: 5 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDIQVVGT*NDIILV
Trigger: CACCAATATTATGTCATTCAAGGTACCGACAACCTG...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAGACCCTTGTTCTCTCTaGTGTCTTTATCCGGTATTA +
Preference number: 5 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDIDPCSL*CLYPVL
Trigger: TAATACCGGATAAAGACACAAGAGAGAACAAGGGTC...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000429602.7
ENST00000443967.5
CDS-3UTR CAA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGTCTTCAGTTACTGCTTaGACCAGCCACTTGATAACA +
Preference number: 5 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILSSVTA*TSHLIT
Trigger: TGTTATCAAGTGGCTGGTCAAAGCAGTAACTGAAGA...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGTCTTCAGTTACTGCTTaGACCAGCCACTTGATAACA +
Preference number: 5 (lower is better)
Translates to: VVGTLNDIILVYRLGSAESSVTA*TSHLIT
Trigger: TGTTATCAAGTGGCTGGTCAAAGCAGTAACTGAAGA...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTACGTTTGATTTCCATTaGGGGGCTGAGTCAATCCAT +
Preference number: 5 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGTFDFH*GAESIH
Trigger: ATGGATTGACTCAGCCCCCAAATGGAAATCAAACGT...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAACGTTTGATTTCCATTaGGGGGCTGAGTCAATCCAT +
Preference number: 5 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLTFDFH*GAESIH
Trigger: ATGGATTGACTCAGCCCCCAAATGGAAATCAAACGT...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATAATGATTTCTAACACTTaGCAGCGCAGAAGGTGGCTT +
Preference number: 5 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIMISNT*QRRRWL
Trigger: AAGCCACCTTCTGCGCTGCAAAGTGTTAGAAATCAT...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATCTCCTTGCTGGGGTTaGGGCTTAATCCTTTTGATT +
Preference number: 5 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIISPCWG*GLILLI
Trigger: AATCAAAAGGATTAAGCCCAAACCCCAGCAAGGAGA...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCTCCTTGCTGGGGTTaGGGCTTAATCCTTTTGATT +
Preference number: 5 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGSPCWG*GLILLI
Trigger: AATCAAAAGGATTAAGCCCAAACCCCAGCAAGGAGA...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGCAGGTTGTCGGTACCTaGAATGACATAATATTGGTG +
Preference number: 5 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILQVVGT*NDIILV
Trigger: CACCAATATTATGTCATTCAAGGTACCGACAACCTG...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAACACACTTGATCCTTTaGTTTCTACCCCCTATTCAT +
Preference number: 5 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDITHLIL*FLPPIH
Trigger: ATGAATAGGGGGTAGAAACAAAAGGATCAAGTGTGT...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATCTTCAGTTACTGCTTaGACCAGCCACTTGATAACA +
Preference number: 5 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIISSVTA*TSHLIT
Trigger: TGTTATCAAGTGGCTGGTCAAAGCAGTAACTGAAGA...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp GGAAAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATATTGGGCTTAATCCTTTaGATTATTAAGTCCTTTCGG +
Preference number: 5 (lower is better)
Translates to: GKMNVSLLKQVVGTLNDILGLIL*IIKSFR
Trigger: CCGAAAGGACTTAATAATCAAAAGGATTAAGCCCAA...TATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp CTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTCAGGTTGTCGGTACCTaGAATGACATAATATTGGTG +
Preference number: 5 (lower is better)
Translates to: LKQVVGTLNDIILVYRLGQVVGT*NDIILV
Trigger: CACCAATATTATGTCATTCAAGGTACCGACAACCTG...ACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGACACACTTGATCCTTTaGTTTCTACCCCCTATTCAT +
Preference number: 5 (lower is better)
Translates to: VVGTLNDIILVYRLGSAETHLIL*FLPPIH
Trigger: ATGAATAGGGGGTAGAAACAAAAGGATCAAGTGTGT...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGACACACTTGATCCTTTaGTTTCTACCCCCTATTCAT +
Preference number: 5 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILTHLIL*FLPPIH
Trigger: ATGAATAGGGGGTAGAAACAAAAGGATCAAGTGTGT...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATAGACCCTTGTTCTCTCTaGTGTCTTTATCCGGTATTA +
Preference number: 5 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIDPCSL*CLYPVL
Trigger: TAATACCGGATAAAGACACAAGAGAGAACAAGGGTC...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000429602.7
ENST00000443967.5
CDS-3UTR CAA 90 bp GTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTTCAGCAGAGTTGGGCTTAATCCTTTaGATTATTAAGTCCTTTCGG +
Preference number: 5 (lower is better)
Translates to: VVGTLNDIILVYRLGSAELGLIL*IIKSFR
Trigger: CCGAAAGGACTTAATAATCAAAAGGATTAAGCCCAA...CTCTGCTGAACCTAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp ATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGTTGGGCTTAATCCTTTaGATTATTAAGTCCTTTCGG +
Preference number: 5 (lower is better)
Translates to: MNVSLLKQVVGTLNDIILLGLIL*IIKSFR
Trigger: CCGAAAGGACTTAATAATCAAAAGGATTAAGCCCAA...CAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAACACACTTGATCCTTTaGTTTCTACCCCCTATTCAT +
Preference number: 5 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLTHLIL*FLPPIH
Trigger: ATGAATAGGGGGTAGAAACAAAAGGATCAAGTGTGT...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATAACACACTTGATCCTTTaGTTTCTACCCCCTATTCAT +
Preference number: 5 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIITHLIL*FLPPIH
Trigger: ATGAATAGGGGGTAGAAACAAAAGGATCAAGTGTGT...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTATTGGGCTTAATCCTTTaGATTATTAAGTCCTTTCGG +
Preference number: 5 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLLGLIL*IIKSFR
Trigger: CCGAAAGGACTTAATAATCAAAAGGATTAAGCCCAA...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp CTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATATTGGTGTATAGACTAGGTCTAACAGAATGCTaGCATTTCATTAGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: LLKQVVGTLNDIILVYRLGLTEC*HFIREK
Trigger: TTTTTCCCTAATGAAATGCAAGCATTCTGTTAGACC...TAGTCTATACACCAATATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS-3UTR CAA 90 bp AAAATGAACGTCTCTCTCCTGAAACAGGTTGTCGGTACCTTGAATGACATAATAGGTCTAACAGAATGCTaGCATTTCATTAGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: KMNVSLLKQVVGTLNDIIGLTEC*HFIREK
Trigger: TTTTTCCCTAATGAAATGCAAGCATTCTGTTAGACC...TATTATGTCATTCAAGGTACCGACAACCTGTTTCAGGAGAGAGACGTTCATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS CAA 72 bp GTGCTTGGCAGGCCCTCAGGAGCCGCTCCAGCCCTTTaGAAAGGGCTCTGCATCAGGGTTCAAGTCCGCAGC +
Preference number: 6 (lower is better)
Translates to: VLGRPSGAAPAL*KGLCIRVQVRS
Trigger: GCTGCGGACTTGAACCCTGATGCAGAGCCCTTTCAAAAGGGCTGGAGCGGCTCCTGAGGGCCTGCCAAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS CAA 90 bp TGGCATTCAGTGCTTGGCAGGCCCTCAGGAGCCGCTCCAGCCCTTTaGAAAGGGCTCTGCATCAGGGTTCAAGTCCGCAGCATAGAAGAG +
Preference number: 6 (lower is better)
Translates to: WHSVLGRPSGAAPAL*KGLCIRVQVRSIEE
Trigger: CTCTTCTATGCTGCGGACTTGAACCCTGATGCAGAGCCCTTTCAAAAGGGCTGGAGCGGCTCCTGAGGGCCTGCCAAGCACTGAATGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS TCA 72 bp GCTCCCCATTCACCTCTGCCATGGTTGGAAGCTTCCTaGGGTCCTCACCAGAAGCAGATGCTGGTGCCATGC +
Preference number: 6 (lower is better)
Translates to: APHSPLPWLEAS*GPHQKQMLVPC
Trigger: GCATGGCACCAGCATCTGCTTCTGGTGAGGACCTCAGGAAGCTTCCAACCATGGCAGAGGTGAATGGGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443967.5
CDS CCA 72 bp AGCTGCAGGTGGGGGTCCTGTCCACCTCTACGGCTATaGAGAGCATCCTCTGAAGCTGGCACACAATCAGCT +
Preference number: 6 (lower is better)
Translates to: SCRWGSCPPLRL*RASSEAGTQSA
Trigger: AGCTGATTGTGTGCCAGCTTCAGAGGATGCTCTCCATAGCCGTAGAGGTGGACAGGACCCCCACCTGCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS CAA 90 bp GTTCTTGCTTGGGGGACAAATGCTGGAGGGTTCTATTCAGCCATCTaGCTCTGCCTTCCCTGCTTGTTCTTGAACACGGTCCGGCGGGGC +
Preference number: 6 (lower is better)
Translates to: VLAWGTNAGGFYSAI*LCLPCLFLNTVRRG
Trigger: GCCCCGCCGGACCGTGTTCAAGAACAAGCAGGGAAGGCAGAGCAAGATGGCTGAATAGAACCCTCCAGCATTTGTCCCCCAAGCAAGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508769.1
CDS GCA 72 bp TGGAGAGAGAGTTCAGGAGGTATTCTTGGCATTCAGTaGTTGGCAGGCCCTCAGGAGCCGCTCCAGCCCTTT +
Preference number: 6 (lower is better)
Translates to: WRESSGGILGIQ*LAGPQEPLQPF
Trigger: AAAGGGCTGGAGCGGCTCCTGAGGGCCTGCCAAGCACTGAATGCCAAGAATACCTCCTGAACTCTCTCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS CCA 72 bp GAGAGAGTTCAGGAGGTATTCTTGGCATTCAGTGCTTaGCAGGCCCTCAGGAGCCGCTCCAGCCCTTTTGAA +
Preference number: 6 (lower is better)
Translates to: ERVQEVFLAFSA*QALRSRSSPFE
Trigger: TTCAAAAGGGCTGGAGCGGCTCCTGAGGGCCTGCCAAGCACTGAATGCCAAGAATACCTCCTGAACTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS GCA 72 bp AGCATCTGGATCAGGCGGCTGCGGAAGGCCTCAATCTaGTTCTCTACGTCTACCACTGTGATGTCATCTCCT +
Preference number: 6 (lower is better)
Translates to: SIWIRRLRKASI*FSTSTTVMSSP
Trigger: AGGAGATGACATCACAGTGGTAGACGTAGAGAAGCAGATTGAGGCCTTCCGCAGCCGCCTGATCCAGATGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS GCA 72 bp ACAAATGCTGGAGGGTTCTATTCAGCCATCTTGCTCTaGCTTCCCTGCTTGTTCTTGAACACGGTCCGGCGG +
Preference number: 6 (lower is better)
Translates to: TNAGGFYSAILL*LPCLFLNTVRR
Trigger: CCGCCGGACCGTGTTCAAGAACAAGCAGGGAAGGCAGAGCAAGATGGCTGAATAGAACCCTCCAGCATTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508769.1
CDS CCA 72 bp CCAGCACAAACCCAAACATCATCTCGGCAATTTTATTaGAGCTGCAGGTGGGGGTCCTGTCCACCTCTACGG +
Preference number: 6 (lower is better)
Translates to: PAQTQTSSRQFY*SCRWGSCPPLR
Trigger: CCGTAGAGGTGGACAGGACCCCCACCTGCAGCTCCAATAAAATTGCCGAGATGATGTTTGGGTTTGTGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS CCA 72 bp TGGAAGCTTCCTGAGGTCCTCACCAGAAGCAGATGCTaGTGCCATGCTTCTTGTTCAGCCTGTAATCCCAGC +
Preference number: 6 (lower is better)
Translates to: WKLPEVLTRSRC*CHASCSACNPS
Trigger: GCTGGGATTACAGGCTGAACAAGAAGCATGGCACCAGCATCTGCTTCTGGTGAGGACCTCAGGAAGCTTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000443967.5
CDS CCA 72 bp AATGAAGTCCTGCTCCCCATTCACCTCTGCCATGGTTaGAAGCTTCCTGAGGTCCTCACCAGAAGCAGATGC +
Preference number: 6 (lower is better)
Translates to: NEVLLPIHLCHG*KLPEVLTRSRC
Trigger: GCATCTGCTTCTGGTGAGGACCTCAGGAAGCTTCCAACCATGGCAGAGGTGAATGGGGAGCAGGACTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000443967.5
CDS TCA 72 bp GCAGGCGGGTGGGTGTCTCACAGCTGTGGAGGAATATaGTTTCTAACACTTTGCAGCGCAGAAGGTGGCTTT +
Preference number: 6 (lower is better)
Translates to: AGGWVSHSCGGI*FLTLCSAEGGF
Trigger: AAAGCCACCTTCTGCGCTGCAAAGTGTTAGAAATCATATTCCTCCACAGCTGTGAGACACCCACCCGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS GCA 72 bp CAAACCCAAACATCATCTCGGCAATTTTATTGGAGCTaGAGGTGGGGGTCCTGTCCACCTCTACGGCTATGG +
Preference number: 6 (lower is better)
Translates to: QTQTSSRQFYWS*RWGSCPPLRLW
Trigger: CCATAGCCGTAGAGGTGGACAGGACCCCCACCTGCAGCTCCAATAAAATTGCCGAGATGATGTTTGGGTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS CCA 72 bp CAAACATCATCTCGGCAATTTTATTGGAGCTGCAGGTaGGGGTCCTGTCCACCTCTACGGCTATGGAGAGCA +
Preference number: 6 (lower is better)
Translates to: QTSSRQFYWSCR*GSCPPLRLWRA
Trigger: TGCTCTCCATAGCCGTAGAGGTGGACAGGACCCCCACCTGCAGCTCCAATAAAATTGCCGAGATGATGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS CCA 72 bp AGAGACAGAGGCAGGCGGGTGGGTGTCTCACAGCTGTaGAGGAATATGATTTCTAACACTTTGCAGCGCAGA +
Preference number: 6 (lower is better)
Translates to: RDRGRRVGVSQL*RNMISNTLQRR
Trigger: TCTGCGCTGCAAAGTGTTAGAAATCATATTCCTCCACAGCTGTGAGACACCCACCCGCCTGCCTCTGTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS CAA 90 bp TCAGGAATGTCCAGCACAAACCCAAACATCATCTCGGCAATTTTATaGGAGCTGCAGGTGGGGGTCCTGTCCACCTCTACGGCTATGGAG +
Preference number: 6 (lower is better)
Translates to: SGMSSTNPNIISAIL*ELQVGVLSTSTAME
Trigger: CTCCATAGCCGTAGAGGTGGACAGGACCCCCACCTGCAGCTCCAATAAAATTGCCGAGATGATGTTTGGGTTTGTGCTGGACATTCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS GCA 72 bp GCCATGATGTCCACTCTACTGATGAACTTCCAGTCATaGGAGCTGATTGAGCCAAGTCTGTTGGCTTGGCTC +
Preference number: 6 (lower is better)
Translates to: AMMSTLLMNFQS*ELIEPSLLAWL
Trigger: GAGCCAAGCCAACAGACTTGGCTCAATCAGCTCGCATGACTGGAAGTTCATCAGTAGAGTGGACATCATGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332772.4
CDS CAA 72 bp GAGCTGATTGAGCCAAGTCTGTTGGCTTGGCTCAACTaGACTGTTGGGCCAAGCCTGAGTTGGGTATTCTGT +
Preference number: 6 (lower is better)
Translates to: ELIEPSLLAWLN*TVGPSLSWVFC
Trigger: ACAGAATACCCAACTCAGGCTTGGCCCAACAGTCAAGTTGAGCCAAGCCAACAGACTTGGCTCAATCAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000332772.4
CDS TCA 72 bp AGGGTGGCTACTGCTGGCTTTCAAGATTCCTGTTCCTaGAGACGTTTGATTTCCATTTGGGGGCTGAGTCAA +
Preference number: 6 (lower is better)
Translates to: RVATAGFQDSCS*RRLISIWGLSQ
Trigger: TTGACTCAGCCCCCAAATGGAAATCAAACGTCTTCAGGAACAGGAATCTTGAAAGCCAGCAGTAGCCACCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
ENST00000481515.1
CDS CAA 90 bp CGGGTGGGTGTCTCACAGCTGTGGAGGAATATGATTTCTAACACTTaGCAGCGCAGAAGGTGGCTTTCCATGGTAGTAAAGAACATTTCT +
Preference number: 6 (lower is better)
Translates to: RVGVSQLWRNMISNT*QRRRWLSMVVKNIS
Trigger: AGAAATGTTCTTTACTACCATGGAAAGCCACCTTCTGCGCTGCAAAGTGTTAGAAATCATATTCCTCCACAGCTGTGAGACACCCACCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS TCA 72 bp AGAGGCAGCCATGGGAAGTCAATCTCTCCCTCTCACTaGACCTATCAACCTCAGGATATACCCAAAACTACA +
Preference number: 6 (lower is better)
Translates to: RGSHGKSISPSH*TYQPQDIPKTT
Trigger: TGTAGTTTTGGGTATATCCTGAGGTTGATAGGTTCAGTGAGAGGGAGAGATTGACTTCCCATGGCTGCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000332772.4
CDS CCA 72 bp CTTGTGTGGATAGTTGTTCAAGTTGGTGTTCTTGCTTaGGGGACAAATGCTGGAGGGTTCTATTCAGCCATC +
Preference number: 6 (lower is better)
Translates to: LVWIVVQVGVLA*GTNAGGFYSAI
Trigger: GATGGCTGAATAGAACCCTCCAGCATTTGTCCCCCAAGCAAGAACACCAACTTGAACAACTATCCACACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503595.1
ENST00000508769.1
CDS TCA 72 bp GCTGTAACCCTTTACTGTCTCCTGAAATGCAGGAAGTaGAGGGCAGTGTCCTCTAGCATTTGTTTTGCATCT +
Preference number: 6 (lower is better)
Translates to: AVTLYCLLKCRK*RAVSSSICFAS
Trigger: AGATGCAAAACAAATGCTAGAGGACACTGCCCTTCACTTCCTGCATTTCAGGAGACAGTAAAGGGTTACAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481515.1
CDS GCA 72 bp TCCATTTGGGGGCTGAGTCAATCCATCTTCAGTTACTaGTTTGACCAGCCACTTGATAACATCCCTGACATT +
Preference number: 6 (lower is better)
Translates to: SIWGLSQSIFSY*FDQPLDNIPDI
Trigger: AATGTCAGGGATGTTATCAAGTGGCTGGTCAAAGCAGTAACTGAAGATGGATTGACTCAGCCCCCAAATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
ENST00000481515.1
CDS CCA 72 bp CTGAAAGTGCTTTCTTGTGTGGATAGTTGTTCAAGTTaGTGTTCTTGCTTGGGGGACAAATGCTGGAGGGTT +
Preference number: 6 (lower is better)
Translates to: LKVLSCVDSCSS*CSCLGDKCWRV
Trigger: AACCCTCCAGCATTTGTCCCCCAAGCAAGAACACCAACTTGAACAACTATCCACACAAGAAAGCACTTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503595.1
ENST00000508769.1
CDS CAA 72 bp GTCTCACAGCTGTGGAGGAATATGATTTCTAACACTTaGCAGCGCAGAAGGTGGCTTTCCATGGTAGTAAAG +
Preference number: 6 (lower is better)
Translates to: VSQLWRNMISNT*QRRRWLSMVVK
Trigger: CTTTACTACCATGGAAAGCCACCTTCTGCGCTGCAAAGTGTTAGAAATCATATTCCTCCACAGCTGTGAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS CAA 72 bp TCTTGTGTGGATAGTTGTTCAAGTTGGTGTTCTTGCTaGGGGGACAAATGCTGGAGGGTTCTATTCAGCCAT +
Preference number: 6 (lower is better)
Translates to: SCVDSCSSWCSC*GDKCWRVLFSH
Trigger: ATGGCTGAATAGAACCCTCCAGCATTTGTCCCCCAAGCAAGAACACCAACTTGAACAACTATCCACACAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000503595.1
ENST00000508769.1
CDS CAA 90 bp GTTCTTGCTTGGGGGACAAATGCTGGAGGGTTCTATTCAGCCATCTaGCTCTGCCTTCCCTGCTTGTTCTTGAACTTAAAAGAAAGAATT +
Preference number: 6 (lower is better)
Translates to: VLAWGTNAGGFYSAI*LCLPCLFLNLKERI
Trigger: AATTCTTTCTTTTAAGTTCAAGAACAAGCAGGGAAGGCAGAGCAAGATGGCTGAATAGAACCCTCCAGCATTTGTCCCCCAAGCAAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503595.1
CDS CAA 72 bp ACGTCTACCACTGTGATGTCATCTCCTTGCTGGGGTTaGGGCTTAATCCTTTTGATTATTAAGTCCTTTCGG +
Preference number: 6 (lower is better)
Translates to: TSTTVMSSPCWG*GLILLIIKSFR
Trigger: CCGAAAGGACTTAATAATCAAAAGGATTAAGCCCAAACCCCAGCAAGGAGATGACATCACAGTGGTAGACGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS CCA 72 bp TTCTCTACGTCTACCACTGTGATGTCATCTCCTTGCTaGGGTTTGGGCTTAATCCTTTTGATTATTAAGTCC +
Preference number: 6 (lower is better)
Translates to: FSTSTTVMSSPC*GLGLILLIIKS
Trigger: GGACTTAATAATCAAAAGGATTAAGCCCAAACCCCAGCAAGGAGATGACATCACAGTGGTAGACGTAGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
CDS CAA 72 bp TCAAGATTCCTGTTCCTGAAGACGTTTGATTTCCATTaGGGGGCTGAGTCAATCCATCTTCAGTTACTGCTT +
Preference number: 6 (lower is better)
Translates to: SRFLFLKTFDFH*GAESIHLQLLL
Trigger: AAGCAGTAACTGAAGATGGATTGACTCAGCCCCCAAATGGAAATCAAACGTCTTCAGGAACAGGAATCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000332772.4
ENST00000341199.10
ENST00000429602.7
ENST00000430704.6
ENST00000443967.5
ENST00000481515.1
CDS TCA 72 bp GCAGTGTCCTCTAGCATTTGTTTTGCATCTGCGTTGTaGCTTCGTATTCACTTTGTGAAGTCCTATTCATTT +
Preference number: 6 (lower is better)
Translates to: AVSSSICFASAL*LRIHFVKSYSF
Trigger: AAATGAATAGGACTTCACAAAGTGAATACGAAGTCACAACGCAGATGCAAAACAAATGCTAGAGGACACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481515.1