RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SIM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000112246

Ensembl transcript IDs: ENST00000262901.4, ENST00000369208.8, ENST00000505753.1, ENST00000511871.1

Found 406 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGTGTGTGTGTATGCTTTCTGCATACAGTCCTAGAGAAGGAACTCTaGGCAAACCCCTATTTGGCAATGACCACACTCTCACTTTTTGAG +
Preference number: 1 (lower is better)
Translates to: CVCVCFLHTVLEKEL*ANPYLAMTTLSLFE
Trigger: CTCAAAAAGTGAGAGTGTGGTCATTGCCAAATAGGGGTTTGCTCAGAGTTCCTTCTCTAGGACTGTATGCAGAAAGCATACACACACACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369208.8
3UTR TCA 90 bp TCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTaGGCACTCCAGGTTTTTGATGTGTGTCCCAATATCTCAGTGTTC +
Preference number: 1 (lower is better)
Translates to: SLCLWPFHIHRTTSN*ALQVFDVCPNISVF
Trigger: GAACACTGAGATATTGGGACACACATCAAAAACCTGGAGTGCTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
3UTR TCA 90 bp ACTCTGAGCAAACCCCTATTTGGCAATGACCACACTCTCACTTTTTaGGTTAAGCACTATCTGTACAACCCTTACAAGAAATTAGCACCA +
Preference number: 1 (lower is better)
Translates to: TLSKPLFGNDHTLTF*VKHYLYNPYKKLAP
Trigger: TGGTGCTAATTTCTTGTAAGGGTTGTACAGATAGTGCTTAACTCAAAAAGTGAGAGTGTGGTCATTGCCAAATAGGGGTTTGCTCAGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369208.8
3UTR CCA 90 bp TTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTaGCACATATGTGCTTTGAAACGTTTTCAAACACTTAACACTGCT +
Preference number: 1 (lower is better)
Translates to: FYLRLSPEAFHMLSH*HICALKRFQTLNTA
Trigger: AGCAGTGTTAAGTGTTTGAAAACGTTTCAAAGCACATATGTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
3UTR-3UTR CCA 90 bp AACATGAACGCTGGGGCTGCCTTACAAACCAGGAAACTAGAGCCCAGGCACGGTGTGTTTGAGGATCACTaGATAGTCACAATGCAATGT +
Preference number: 2 (lower is better)
Translates to: NMNAGAALQTRKLEPRHGVFEDH*IVTMQC
Trigger: ACATTGCATTGTGACTATCCAGTGATCCTCAAACAC...ACCGTGCCTGGGCTCTAGTTTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
3UTR-3UTR GCA 90 bp AACATGAACGCTGGGGCTGCCTTACAAACCAGGAAACTAGAGCCCAGGCACGGTACATTGGCACATATGTaGTTTGAAACGTTTTCAAAC +
Preference number: 2 (lower is better)
Translates to: NMNAGAALQTRKLEPRHGTLAHM*FETFSN
Trigger: GTTTGAAAACGTTTCAAAGCACATATGTGCCAATGT...ACCGTGCCTGGGCTCTAGTTTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
3UTR-3UTR GCA 90 bp GTTCAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGTGAAAACTCATTTTTaGACCATATCCAGAACCATT +
Preference number: 2 (lower is better)
Translates to: VQFCSITEHERWGCLTNQVKTHF*TISRTI
Trigger: AATGGTTCTGGATATGGTGCAAAAATGAGTTTTCAC...CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
3UTR CAA 90 bp CATTTTGCCTATTCCTTCAGAGTACTGCTCTTAGCTCTTAACTACTaGTCTATCAGCCTAAGCTTTTATCTTAGACTCTCTCCTGAGGCT +
Preference number: 2 (lower is better)
Translates to: HFAYSFRVLLLALNY*SISLSFYLRLSPEA
Trigger: AGCCTCAGGAGAGAGTCTAAGATAAAAGCTTAGGCTGATAGACAAGTAGTTAAGAGCTAAGAGCAGTACTCTGAAGGAATAGGCAAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
3UTR-3UTR TCA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACATAATGGATACCAGGTaGAAACTCATTTTTGCACCA +
Preference number: 2 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHIMDTR*KLIFAP
Trigger: TGGTGCAAAAATGAGTTTTCACCTGGTATCCATTAT...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
3UTR-3UTR TCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAAATAATGGATACCAGGTaGAAACTCATTTTTGCACCA +
Preference number: 2 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQIMDTR*KLIFAP
Trigger: TGGTGCAAAAATGAGTTTTCACCTGGTATCCATTAT...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
3UTR-3UTR CCA 90 bp TCAAATGTGTATTCAGAAGATTTCTTTATCTGTGCTGCCATCCATCAAACTTACACAGAACATGAACGCTaGGGCTGCCTTACAAACCAG +
Preference number: 2 (lower is better)
Translates to: SNVYSEDFFICAAIHQTYTEHER*GCLTNQ
Trigger: CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGT...GTAAGTTTGATGGATGGCAGCACAGATAAAGAAATCTTCTGAATACACATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369208.8
3UTR CAA 90 bp TCAAGTTCTGCCAGTACATTCCCTTCCTTAAATATGGCAAGAGTTTaGGGCACGGGACTCCTAGGAAATATTATCTATGAAATCTCTCTA +
Preference number: 2 (lower is better)
Translates to: SSSASTFPSLNMARV*GTGLLGNIIYEISL
Trigger: TAGAGAGATTTCATAGATAATATTTCCTAGGAGTCCCGTGCCCAAAACTCTTGCCATATTTAAGGAAGGGAATGTACTGGCAGAACTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369208.8
3UTR-3UTR GCA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACGTGAAAACTCATTTTTaGACCATATCCAGAACCATT +
Preference number: 2 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHVKTHF*TISRTI
Trigger: AATGGTTCTGGATATGGTGCAAAAATGAGTTTTCAC...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
3UTR-3UTR TCA 90 bp CCAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCAATAGTTTGTGTGTTTaGGGATCACTGGATAGTCAC +
Preference number: 2 (lower is better)
Translates to: PGENSFLHHIQNHFSNLCNSLCV*GSLDSH
Trigger: GTGACTATCCAGTGATCCTCAAACACACAAACTATT...GCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
3UTR-3UTR TCA 90 bp CAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCAATAGTTTGTGTGTTTaGGGATCACTGGATAGTCAC +
Preference number: 2 (lower is better)
Translates to: QVKTHFCTISRTISLIYANSLCV*GSLDSH
Trigger: GTGACTATCCAGTGATCCTCAAACACACAAACTATT...GGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
3UTR-3UTR CCA 90 bp TCAAATGTGTATTCAGAAGATTTCTTTATCTGTGCTGCCATCCATCAAACTTACCACATGTTGTCACATTaGCACATATGTGCTTTGAAA +
Preference number: 2 (lower is better)
Translates to: SNVYSEDFFICAAIHQTYHMLSH*HICALK
Trigger: TTTCAAAGCACATATGTGCCAATGTGACAACATGTG...GTAAGTTTGATGGATGGCAGCACAGATAAAGAAATCTTCTGAATACACATTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369208.8
3UTR-3UTR CCA 90 bp TCAAATGTGTATTCAGAAGATTTCTTTATCTGTGCTGCCATCCATCAAACTTACGTATGGCAGGTGAAATaGGCAATAAAGATACTTATT +
Preference number: 2 (lower is better)
Translates to: SNVYSEDFFICAAIHQTYVWQVK*AIKILI
Trigger: AATAAGTATCTTTATTGCCCATTTCACCTGCCATAC...GTAAGTTTGATGGATGGCAGCACAGATAAAGAAATCTTCTGAATACACATTTGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369208.8
3UTR GCA 72 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTaGCTTACAAACCAGGAAACTAGAGCCCAGGCACGG +
Preference number: 3 (lower is better)
Translates to: QFCSITEHERWG*LTNQETRAQAR
Trigger: CCGTGCCTGGGCTCTAGTTTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
3UTR-3UTR CAA 90 bp GTTCAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGAATGAGCTGGCTGATTaGAAACCACAAAGAAGTCAG +
Preference number: 3 (lower is better)
Translates to: VQFCSITEHERWGCLTNQNELAD*KPQRSQ
Trigger: CTGACTTCTTTGTGGTTTCAAATCAGCCAGCTCATT...CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
3UTR CCA 72 bp AATTCTCACATACTCAAGTCCTGCCTGTTGGCCCTGTaGCGCTCACTTATACAAAACATCGCCCTCTGTATA +
Preference number: 3 (lower is better)
Translates to: NSHILKSCLLAL*RSLIQNIALCI
Trigger: TATACAGAGGGCGATGTTTTGTATAAGTGAGCGCCACAGGGCCAACAGGCAGGACTTGAGTATGTGAGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
3UTR TCA 72 bp GTATGCTTTCTGCATACAGTCCTAGAGAAGGAACTCTaGGCAAACCCCTATTTGGCAATGACCACACTCTCA +
Preference number: 3 (lower is better)
Translates to: VCFLHTVLEKEL*ANPYLAMTTLS
Trigger: TGAGAGTGTGGTCATTGCCAAATAGGGGTTTGCTCAGAGTTCCTTCTCTAGGACTGTATGCAGAAAGCATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
3UTR CCA 72 bp AGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTaGCACATATGTGCTTTGAAACGTTTTCAAACACTT +
Preference number: 3 (lower is better)
Translates to: RLSPEAFHMLSH*HICALKRFQTL
Trigger: AAGTGTTTGAAAACGTTTCAAAGCACATATGTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
3UTR-3UTR CAA 90 bp TCAAATGTGTATTCAGAAGATTTCTTTATCTGTGCTGCCATCCATCAAACTTACCTGTCCCTGGCACATTaGGTAGAATATATAGCCACC +
Preference number: 3 (lower is better)
Translates to: SNVYSEDFFICAAIHQTYLSLAH*VEYIAT
Trigger: GGTGGCTATATATTCTACCAAATGTGCCAGGGACAG...GTAAGTTTGATGGATGGCAGCACAGATAAAGAAATCTTCTGAATACACATTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369208.8
3UTR GCA 72 bp TACATTTTGGCTAAATCTAGAAAGTTAACTGTAACCTaGCTAAAGGAGCCCACACACCTGCTTAAGTCACAA +
Preference number: 3 (lower is better)
Translates to: YILAKSRKLTVT*LKEPTHLLKSQ
Trigger: TTGTGACTTAAGCAGGTGTGTGGGCTCCTTTAGGCAGGTTACAGTTAACTTTCTAGATTTAGCCAAAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
3UTR TCA 72 bp AAACCCCTATTTGGCAATGACCACACTCTCACTTTTTaGGTTAAGCACTATCTGTACAACCCTTACAAGAAA +
Preference number: 3 (lower is better)
Translates to: KPLFGNDHTLTF*VKHYLYNPYKK
Trigger: TTTCTTGTAAGGGTTGTACAGATAGTGCTTAACTCAAAAAGTGAGAGTGTGGTCATTGCCAAATAGGGGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369208.8
3UTR TCA 72 bp ACAAAAGACTTGTGGACCGAAGCACACCTAAATATCTaGCCTGTAGTGATTGTGACATTAATATTACACATC +
Preference number: 3 (lower is better)
Translates to: TKDLWTEAHLNI*PVVIVTLILHI
Trigger: GATGTGTAATATTAATGTCACAATCACTACAGGTCAGATATTTAGGTGTGCTTCGGTCCACAAGTCTTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
3UTR TCA 72 bp ACCAAGAAAGAGCAAGTGGTTTTTCTGTGTAAATACTaGAGGCAATCATTTATTGCATCCCGTCTCATTTTG +
Preference number: 3 (lower is better)
Translates to: TKKEQVVFLCKY*RQSFIASRLIL
Trigger: CAAAATGAGACGGGATGCAATAAATGATTGCCTTCAGTATTTACACAGAAAAACCACTTGCTCTTTCTTGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369208.8
3UTR-3UTR CAA 90 bp TCAAATGTGTATTCAGAAGATTTCTTTATCTGTGCTGCCATCCATCAAACTTACGGTGAAAACTCATTTTaGCACCATATCCAGAACCAT +
Preference number: 3 (lower is better)
Translates to: SNVYSEDFFICAAIHQTYGENSF*HHIQNH
Trigger: ATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC...GTAAGTTTGATGGATGGCAGCACAGATAAAGAAATCTTCTGAATACACATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369208.8
3UTR TCA 72 bp ACTGAAGGCAATCATTTATTGCATCCCGTCTCATTTTaGATGTCACCTCAGCACTGTCATATTATCTTTTAT +
Preference number: 3 (lower is better)
Translates to: TEGNHLLHPVSF*MSPQHCHIIFY
Trigger: ATAAAAGATAATATGACAGTGCTGAGGTGACATTCAAAATGAGACGGGATGCAATAAATGATTGCCTTCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369208.8
3UTR CCA 72 bp AACATCTATGATTTGAGTGAACTAGGGAACCAAATCTaGGCATTCAAACATTTTATATCAGAAAGACTGTGT +
Preference number: 3 (lower is better)
Translates to: NIYDLSELGNQI*AFKHFISERLC
Trigger: ACACAGTCTTTCTGATATAAAATGTTTGAATGCCCAGATTTGGTTCCCTAGTTCACTCAAATCATAGATGTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR GCA 90 bp GTTCAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGCGGGGTCCAGAAGCTaGGGAGAGGCCGTGTCGGTC +
Preference number: 4 (lower is better)
Translates to: VQFCSITEHERWGCLTNQAGSRS*GEAVSV
Trigger: GACCGACACGGCCTCTCCGCAGCTTCTGGACCCCGC...CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAAGGCTCCCTCCCGGCCTaGGGCGTTCCCAGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: QFCSITEHERWGCLTNQEGSLPA*GVPRKY
Trigger: GTACTTCCTGGGAACGCCGCAGGCCGGGAGGGAGCC...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp GTTCAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGTGCGCGCAGCGCAGGTaGAAGGTGTCGCAGCCGTGC +
Preference number: 4 (lower is better)
Translates to: VQFCSITEHERWGCLTNQCAQRR*KVSQPC
Trigger: GCACGGCTGCGACACCTTCCACCTGCGCTGCGCGCA...CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAAGGGGCTGGTCCGACTTaGGTGGCCCCACGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQGAGPT*VAPRLA
Trigger: GGCGAGGCGTGGGGCCACTCAAGTCGGACCAGCCCC...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACGGGGCTGGTCCGACTTaGGTGGCCCCACGCCTCGCC +
Preference number: 4 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHGAGPT*VAPRLA
Trigger: GGCGAGGCGTGGGGCCACTCAAGTCGGACCAGCCCC...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp AACATGAACGCTGGGGCTGCCTTACAAACCAGGAAACTAGAGCCCAGGCACGGTGGCTGGTTTGGAGGCTaGGATCTGATCCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: NMNAGAALQTRKLEPRHGGWFGG*DLIQGE
Trigger: CTCTCCCTGGATCAGATCTCAGCCTCCAAACCAGCC...ACCGTGCCTGGGCTCTAGTTTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAAGCGCACGATGCGTCGTaGTGGGAGCCAGGCCTATCG +
Preference number: 4 (lower is better)
Translates to: QFCSITEHERWGCLTNQEAHDAS*WEPGLS
Trigger: CGATAGGCCTGGCTCCCAGCACGACGCATCGTGCGC...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp GTTCAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGCGCACGATGCGTCGTaGTGGGAGCCAGGCCTATCG +
Preference number: 4 (lower is better)
Translates to: VQFCSITEHERWGCLTNQAHDAS*WEPGLS
Trigger: CGATAGGCCTGGCTCCCAGCACGACGCATCGTGCGC...CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp AACATGAACGCTGGGGCTGCCTTACAAACCAGGAAACTAGAGCCCAGGCACGGTGGCTTCTCTGCTTTCTaGGGAGGCCTTTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: NMNAGAALQTRKLEPRHGGFSAF*GGLCQG
Trigger: CCCCTGACAAAGGCCTCCCCAGAAAGCAGAGAAGCC...ACCGTGCCTGGGCTCTAGTTTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp AACATGAACGCTGGGGCTGCCTTACAAACCAGGAAACTAGAGCCCAGGCACGGTCGATACAGTGTGGCCTaGAGGAGCGACTGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: NMNAGAALQTRKLEPRHGRYSVA*RSDCCA
Trigger: TGCACAACAGTCGCTCCTCCAGGCCACACTGTATCG...ACCGTGCCTGGGCTCTAGTTTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp AACATGAACGCTGGGGCTGCCTTACAAACCAGGAAACTAGAGCCCAGGCACGGTGCTGACGATACAGTGTaGCCTGGAGGAGCGACTGTT +
Preference number: 4 (lower is better)
Translates to: NMNAGAALQTRKLEPRHGADDTV*PGGATV
Trigger: AACAGTCGCTCCTCCAGGCCACACTGTATCGTCAGC...ACCGTGCCTGGGCTCTAGTTTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp AACATGAACGCTGGGGCTGCCTTACAAACCAGGAAACTAGAGCCCAGGCACGGTCTCTATCACAGAACATaGACGCTGGGGCTGCCTTAC +
Preference number: 4 (lower is better)
Translates to: NMNAGAALQTRKLEPRHGLYHRT*TLGLPY
Trigger: GTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAG...ACCGTGCCTGGGCTCTAGTTTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAAGGCTCCCTCCCGGCCTaGGGCGTTCCCAGGAAGTAC +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQGSLPA*GVPRKY
Trigger: GTACTTCCTGGGAACGCCGCAGGCCGGGAGGGAGCC...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAATGTCAGGGGCAAGGCTaGGCGAGAGCCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQCQGQG*ARAPPG
Trigger: CCCTGGTGGGGCTCTCGCGCAGCCTTGCCCCTGACA...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp GTTCAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGGCCGGCGTTACGCTTaGCCAAGACGCACTTCATCC +
Preference number: 4 (lower is better)
Translates to: VQFCSITEHERWGCLTNQGRRYA*PRRTSS
Trigger: GGATGAAGTGCGTCTTGGCCAAGCGTAACGCCGGCC...CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAATTCACCAGCAGCAAATaGTGCGCGCAGCGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: QFCSITEHERWGCLTNQEFTSSK*CAQRRW
Trigger: CCACCTGCGCTGCGCGCACCATTTGCTGCTGGTGAA...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp AACATGAACGCTGGGGCTGCCTTACAAACCAGGAAACTAGAGCCCAGGCACGGTCCCCACTGGCTGTCATaGTCAGATTCCGATCTTTCT +
Preference number: 4 (lower is better)
Translates to: NMNAGAALQTRKLEPRHGPHWLS*SDSDLS
Trigger: AGAAAGATCGGAATCTGATCATGACAGCCAGTGGGG...ACCGTGCCTGGGCTCTAGTTTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp AACATGAACGCTGGGGCTGCCTTACAAACCAGGAAACTAGAGCCCAGGCACGGTGAATTTGGGCAATCCTaGGGGTCGTTCAGGGTATCA +
Preference number: 4 (lower is better)
Translates to: NMNAGAALQTRKLEPRHGEFGQS*GSFRVS
Trigger: TGATACCCTGAACGACCCTCAGGATTGCCCAAATTC...ACCGTGCCTGGGCTCTAGTTTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR GCA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAATTCCCAGGAAGTACCTaGCTGCCTCACATCGGCCTC +
Preference number: 4 (lower is better)
Translates to: QFCSITEHERWGCLTNQEFPGST*LPHIGL
Trigger: GAGGCCGATGTGAGGCAGGCAGGTACTTCCTGGGAA...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CTGTGGCGCTCACTTATACAAAACATCGCCCTCTGTATACTCAGGTTTCACATTCGTTGTCCAGGGGGCTaGTCCGACTTGAGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: LWRSLIQNIALCILRFHIRCPGG*SDLSGP
Trigger: GGGGCCACTCAAGTCGGACCAGCCCCCTGGACAACG...AATGTGAAACCTGAGTATACAGAGGGCGATGTTTTGTATAAGTGAGCGCCACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CCA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACCACGATGCGTCGTGCTaGGAGCCAGGCCTATCGGCG +
Preference number: 4 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHHDASC*EPGLSA
Trigger: CGCCGATAGGCCTGGCTCCCAGCACGACGCATCGTG...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAAGGCTTCTCTGCTTTCTaGGGAGGCCTTTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: QFCSITEHERWGCLTNQEGFSAF*GGLCQG
Trigger: CCCCTGACAAAGGCCTCCCCAGAAAGCAGAGAAGCC...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp AACATGAACGCTGGGGCTGCCTTACAAACCAGGAAACTAGAGCCCAGGCACGGTACAGAACATGAACGCTaGGGCTGCCTTACAAACCAG +
Preference number: 4 (lower is better)
Translates to: NMNAGAALQTRKLEPRHGTEHER*GCLTNQ
Trigger: CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGT...ACCGTGCCTGGGCTCTAGTTTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp AACATGAACGCTGGGGCTGCCTTACAAACCAGGAAACTAGAGCCCAGGCACGGTGATATGGTCACATGGTaGAGTGTTGGCAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: NMNAGAALQTRKLEPRHGDMVTW*SVGKSR
Trigger: TCTGCTCTTGCCAACACTTCACCATGTGACCATATC...ACCGTGCCTGGGCTCTAGTTTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp AACATGAACGCTGGGGCTGCCTTACAAACCAGGAAACTAGAGCCCAGGCACGGTAGTAGGGTGGTCTCCTaGTGTCTGATGAGGAGATAT +
Preference number: 4 (lower is better)
Translates to: NMNAGAALQTRKLEPRHGSRVVS*CLMRRY
Trigger: ATATCTCCTCATCAGACAGCAGGAGACCACCCTACT...ACCGTGCCTGGGCTCTAGTTTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAATGGAGTCCAGAAAGATaGGCTTCATGTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: QFCSITEHERWGCLTNQEWSPER*ASCPGW
Trigger: CCAGCCTGGACATGAAGCTCATCTTTCTGGACTCCA...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAACAGGGTCTGGAGAACTaGCCACACTATCTTCATCCC +
Preference number: 4 (lower is better)
Translates to: QFCSITEHERWGCLTNQEQGLEN*PHYLHP
Trigger: GGGATGAAGATAGTGTGGTCAGTTCTCCAGACCCTG...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp TTATTTCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTGAGTGTCAGGGGCAAGGCTaGGCGAGAGCCCCACCAGGG +
Preference number: 4 (lower is better)
Translates to: LFHSASGLSIFIELLPIECQGQG*ARAPPG
Trigger: CCCTGGTGGGGCTCTCGCGCAGCCTTGCCCCTGACA...CTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp AACATGAACGCTGGGGCTGCCTTACAAACCAGGAAACTAGAGCCCAGGCACGGTGGGCTGTTGGTAGTTTaGAAAACACAGGGAGTGTTT +
Preference number: 4 (lower is better)
Translates to: NMNAGAALQTRKLEPRHGGLLVV*KTQGVF
Trigger: AAACACTCCCTGTGTTTTGCAAACTACCAACAGCCC...ACCGTGCCTGGGCTCTAGTTTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp AACATGAACGCTGGGGCTGCCTTACAAACCAGGAAACTAGAGCCCAGGCACGGTTCGCTGTCATATAAGTaGTCCAGGGCATATCCAGTT +
Preference number: 4 (lower is better)
Translates to: NMNAGAALQTRKLEPRHGSLSYK*SRAYPV
Trigger: AACTGGATATGCCCTGGAGCACTTATATGACAGCGA...ACCGTGCCTGGGCTCTAGTTTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAATCCCTTGTGTCCTTGTaGTGGGTCTGGTTGCATCCT +
Preference number: 4 (lower is better)
Translates to: QFCSITEHERWGCLTNQESLVSL*WVWLHP
Trigger: AGGATGCAACCAGACCCAGCACAAGGACACAAGGGA...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp TTATTTCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTGAGCTGGTCCGACTTGAGTaGCCCCACGCCTCGCCGAGC +
Preference number: 4 (lower is better)
Translates to: LFHSASGLSIFIELLPIELVRLE*PHASPS
Trigger: GCTCGGCGAGGCGTGGGGCCACTCAAGTCGGACCAG...CTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACAGGGTCTGGAGCAGATaGGAGCCCAGTTCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHRVWSR*EPSSRP
Trigger: TGGCCGAGAACTGGGCTCCCATCTGCTCCAGACCCT...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAACCTCCTTCACAGGCCTaGGTATGGAAATGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: QFCSITEHERWGCLTNQEPPSQA*VWKCLS
Trigger: AGAGAGGCATTTCCATACCCAGGCCTGTGAAGGAGG...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CTGTGGCGCTCACTTATACAAAACATCGCCCTCTGTATACTCAGGTTTCACATTGGTCACCTGATTCACTaGCCGACCCAGGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: LWRSLIQNIALCILRFHIGHLIH*PTQGLE
Trigger: CTCCAGACCCTGGGTCGGCCAGTGAATCAGGTGACC...AATGTGAAACCTGAGTATACAGAGGGCGATGTTTTGTATAAGTGAGCGCCACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CCA 90 bp GTTCAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGTCCTTGTGCTGGGTCTaGTTGCATCCTCAGATGGGA +
Preference number: 4 (lower is better)
Translates to: VQFCSITEHERWGCLTNQSLCWV*LHPQMG
Trigger: TCCCATCTGAGGATGCAACCAGACCCAGCACAAGGA...CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAAGGGCTACCACGAAGATaGAGCCATCCAGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQGLPRR*SHPGSG
Trigger: TCCAGACCCTGGATGGCTTCATCTTCGTGGTAGCCC...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACTTGGAGGCTGAGATCTaGTCCAGGGAGAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHLEAEI*SRESCS
Trigger: GCTGCAGCTCTCCCTGGATCAGATCTCAGCCTCCAA...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAACCCCACTGGCTGTCATaGTCAGATTCCGATCTTTCT +
Preference number: 4 (lower is better)
Translates to: QFCSITEHERWGCLTNQEPHWLS*SDSDLS
Trigger: AGAAAGATCGGAATCTGATCATGACAGCCAGTGGGG...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAACATAGCAGAGAGAGCTaGGGTCCGAAAACTGTCTGT +
Preference number: 4 (lower is better)
Translates to: QFCSITEHERWGCLTNQEHSRES*GPKTVC
Trigger: ACAGACAGTTTTCGGACCGCAGCTCTCTCTGCTATG...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAACAGGAAGTACCTGCCTaGCTCACATCGGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQQEVPA*LTSASF
Trigger: GAAGGAGGCCGATGTGAGGCAGGCAGGTACTTCCTG...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAATTAAGTGGGATTCTCTaGCCAGAGGCAGCATGTGAC +
Preference number: 4 (lower is better)
Translates to: QFCSITEHERWGCLTNQELSGIL*PEAACD
Trigger: GTCACATGCTGCCTCTGGGCAGAGAATCCCACTTAA...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CCA 90 bp CAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCCTGGTCCGACTTGAGTaGCCCCACGCCTCGCCGAGC +
Preference number: 4 (lower is better)
Translates to: QVKTHFCTISRTISLIYALVRLE*PHASPS
Trigger: GCTCGGCGAGGCGTGGGGCCACTCAAGTCGGACCAG...GGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp TCACAATGCAATGTTGTCATTCATCAGTCCTCTCATGTAGTATATATGCACACTTGCGCGCAGCGCAGGTaGAAGGTGTCGCAGCCGTGC +
Preference number: 4 (lower is better)
Translates to: SQCNVVIHQSSHVVYMHTCAQRR*KVSQPC
Trigger: GCACGGCTGCGACACCTTCCACCTGCGCTGCGCGCA...AGTGTGCATATATACTACATGAGAGGACTGATGAATGACAACATTGCATTGTGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAATCTCTGAGATGTACATaGTCTTCCCATCTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: QFCSITEHERWGCLTNQESLRCT*SSHLGL
Trigger: TAGCCCCAGATGGGAAGATCATGTACATCTCAGAGA...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp TCACAATGCAATGTTGTCATTCATCAGTCCTCTCATGTAGTATATATGCACACTTGTAGCCGCCACAGGTaGGGCCGGCGTTACGCTTGG +
Preference number: 4 (lower is better)
Translates to: SQCNVVIHQSSHVVYMHTCSRHR*GRRYAW
Trigger: CCAAGCGTAACGCCGGCCTCACCTGTGGCGGCTACA...AGTGTGCATATATACTACATGAGAGGACTGATGAATGACAACATTGCATTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAAGAGTCTGATTATGGATaGTTTGTCCAGCTGCGAGGT +
Preference number: 4 (lower is better)
Translates to: QFCSITEHERWGCLTNQEESDYG*FVQLRG
Trigger: ACCTCGCAGCTGGACAAAGCATCCATAATCAGACTC...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp TCAAATGTGTATTCAGAAGATTTCTTTATCTGTGCTGCCATCCATCAAACTTACGCGGGGTCCAGAAGCTaGGGAGAGGCCGTGTCGGTC +
Preference number: 4 (lower is better)
Translates to: SNVYSEDFFICAAIHQTYAGSRS*GEAVSV
Trigger: GACCGACACGGCCTCTCCGCAGCTTCTGGACCCCGC...GTAAGTTTGATGGATGGCAGCACAGATAAAGAAATCTTCTGAATACACATTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR GCA 90 bp TTATTTCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTGAGTCTGTAGGCGCACGATaGGTCGTGCTGGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: LFHSASGLSIFIELLPIESVGAR*VVLGAR
Trigger: CCTGGCTCCCAGCACGACGCATCGTGCGCCTACAGA...CTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGAAATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAAGCCTGGGTATGGAAATaGCTCTCTTCCACCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQAWVWK*LSSTSL
Trigger: GAGGCTGGTGGAAGAGAGGCATTTCCATACCCAGGC...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp CTGTGGCGCTCACTTATACAAAACATCGCCCTCTGTATACTCAGGTTTCACATTGCCTGGGTATGGAAATaGCTCTCTTCCACCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LWRSLIQNIALCILRFHIAWVWK*LSSTSL
Trigger: GAGGCTGGTGGAAGAGAGGCATTTCCATACCCAGGC...AATGTGAAACCTGAGTATACAGAGGGCGATGTTTTGTATAAGTGAGCGCCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR GCA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAATTTCATAGGCTTCTCTaGTTTCTGGGGAGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: QFCSITEHERWGCLTNQEFHRLL*FLGRPL
Trigger: CAAAGGCCTCCCCAGAAAGCAGAGAAGCCTATGAAA...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp GTTCAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGATAATCCCTGACGTTTaGTCTTCAGTCTCGCGGCAT +
Preference number: 4 (lower is better)
Translates to: VQFCSITEHERWGCLTNQIIPDV*SSVSRH
Trigger: ATGCCGCGAGACTGAAGAGCAAACGTCAGGGATTAT...CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CCA 90 bp TCACAATGCAATGTTGTCATTCATCAGTCCTCTCATGTAGTATATATGCACACTCGTTGTCCAGGGGGCTaGTCCGACTTGAGTGGCCCC +
Preference number: 4 (lower is better)
Translates to: SQCNVVIHQSSHVVYMHTRCPGG*SDLSGP
Trigger: GGGGCCACTCAAGTCGGACCAGCCCCCTGGACAACG...AGTGTGCATATATACTACATGAGAGGACTGATGAATGACAACATTGCATTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAACATGATCTTCCCATCTaGGGCTACCACGAAGATGAA +
Preference number: 4 (lower is better)
Translates to: QFCSITEHERWGCLTNQEHDLPI*GYHEDE
Trigger: TTCATCTTCGTGGTAGCCCCAGATGGGAAGATCATG...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACCGATACAGTGTGGCCTaGAGGAGCGACTGTTGTGCA +
Preference number: 4 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHRYSVA*RSDCCA
Trigger: TGCACAACAGTCGCTCCTCCAGGCCACACTGTATCG...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CTGTGGCGCTCACTTATACAAAACATCGCCCTCTGTATACTCAGGTTTCACATTTGGGGGTGGAGCTGCTaGTATAGGAGAAGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: LWRSLIQNIALCILRFHIWGWSC*YRRRLV
Trigger: AACCAGCCTTCTCCTATACCAGCAGCTCCACCCCCA...AATGTGAAACCTGAGTATACAGAGGGCGATGTTTTGTATAAGTGAGCGCCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAACAGTCATGGTGGGGGTaGAGCTGCTGGTATAGGAGA +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQQSWWG*SCWYRR
Trigger: TCTCCTATACCAGCAGCTCCACCCCCACCATGACTG...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACCAGTCATGGTGGGGGTaGAGCTGCTGGTATAGGAGA +
Preference number: 4 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHQSWWG*SCWYRR
Trigger: TCTCCTATACCAGCAGCTCCACCCCCACCATGACTG...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CTGTGGCGCTCACTTATACAAAACATCGCCCTCTGTATACTCAGGTTTCACATTTTCTGTTGTCAGTCATaGTGGGGGTGGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LWRSLIQNIALCILRFHIFCCQS*WGWSCW
Trigger: CCAGCAGCTCCACCCCCACCATGACTGACAACAGAA...AATGTGAAACCTGAGTATACAGAGGGCGATGTTTTGTATAAGTGAGCGCCACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CCA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACTGGAGAGCCGGGATTTaGCCCCCTTTCTGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHWRAGI*PPFCCQ
Trigger: CTGACAACAGAAAGGGGGCCAAATCCCGGCTCTCCA...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp GTTCAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGGTATGGGGAAGTCCTaGATTTTGACTTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VQFCSITEHERWGCLTNQGMGKS*ILTLSW
Trigger: CCAGCTCAAAGTCAAAATCCAGGACTTCCCCATACC...CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAAGGTATGGGGAAGTCCTaGATTTTGACTTTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QFCSITEHERWGCLTNQEGMGKS*ILTLSW
Trigger: CCAGCTCAAAGTCAAAATCCAGGACTTCCCCATACC...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp GTTCAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGTCCGAGATAGTGCGGTaGGACTGTTGTCATAGTCAT +
Preference number: 4 (lower is better)
Translates to: VQFCSITEHERWGCLTNQSEIVR*DCCHSH
Trigger: ATGACTATGACAACAGTCCCACCGCACTATCTCGGA...CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp CAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCAGGGTTGATGGGCGGTaGGCACCGCCGTCATCTCGT +
Preference number: 4 (lower is better)
Translates to: QVKTHFCTISRTISLIYARVDGR*APPSSR
Trigger: ACGAGATGACGGCGGTGCTCACCGCCCATCAACCCT...GGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp CTGTGGCGCTCACTTATACAAAACATCGCCCTCTGTATACTCAGGTTTCACATTCTATCTTCATCCCAATaGCCTCGCCCATGGATCCTG +
Preference number: 4 (lower is better)
Translates to: LWRSLIQNIALCILRFHILSSSQ*PRPWIL
Trigger: CAGGATCCATGGGCGAGGTCATTGGGATGAAGATAG...AATGTGAAACCTGAGTATACAGAGGGCGATGTTTTGTATAAGTGAGCGCCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR TCA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAAAGTTACATCAAAGTGTaGGCCATTACAGCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: QFCSITEHERWGCLTNQESYIKV*AITAQG
Trigger: TCCTTGGGCTGTAATGGCTCACACTTTGATGTAACT...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACCCCTTTTCTGGATCATaGATTGGAGGAGGGGTGCGT +
Preference number: 4 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHPFSGS*IGGGVR
Trigger: ACGCACCCCTCCTCCAATTCATGATCCAGAAAAGGG...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR TCA 90 bp AACATGAACGCTGGGGCTGCCTTACAAACCAGGAAACTAGAGCCCAGGCACGGTGAGCATTATTCCTTCTaGTTACTCTCATCTGTGAAA +
Preference number: 4 (lower is better)
Translates to: NMNAGAALQTRKLEPRHGEHYSF*LLSSVK
Trigger: TTTCACAGATGAGAGTAATCAGAAGGAATAATGCTC...ACCGTGCCTGGGCTCTAGTTTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR GCA 90 bp CCAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCTCTGTAGGCGCACGATaGGTCGTGCTGGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: PGENSFLHHIQNHFSNLCSVGAR*VVLGAR
Trigger: CCTGGCTCCCAGCACGACGCATCGTGCGCCTACAGA...GCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp GTTCAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGTCGCTGTCATATAAGTaGTCCAGGGCATATCCAGTT +
Preference number: 4 (lower is better)
Translates to: VQFCSITEHERWGCLTNQSLSYK*SRAYPV
Trigger: AACTGGATATGCCCTGGAGCACTTATATGACAGCGA...CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAAAAGTTAACTGTAACCTaGCTAAAGGAGCCCACACAC +
Preference number: 4 (lower is better)
Translates to: QFCSITEHERWGCLTNQEKLTVT*LKEPTH
Trigger: GTGTGTGGGCTCCTTTAGGCAGGTTACAGTTAACTT...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp GTTCAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGAAGTTAACTGTAACCTaGCTAAAGGAGCCCACACAC +
Preference number: 4 (lower is better)
Translates to: VQFCSITEHERWGCLTNQKLTVT*LKEPTH
Trigger: GTGTGTGGGCTCCTTTAGGCAGGTTACAGTTAACTT...CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAAAGCCTTTTCTTCTACTaGCAGCTGCGAACCCTGGTC +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQSLFFY*QLRTLV
Trigger: GACCAGGGTTCGCAGCTGGCAGTAGAAGAAAAGGCT...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CCA 90 bp TTATTTCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTGAGGGCCGGCGTTACGCTTaGCCAAGACGCACTTCATCC +
Preference number: 4 (lower is better)
Translates to: LFHSASGLSIFIELLPIEGRRYA*PRRTSS
Trigger: GGATGAAGTGCGTCTTGGCCAAGCGTAACGCCGGCC...CTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGAAATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAATCACAGGCCTGGGTATaGAAATGCCTCTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQSQAWV*KCLSST
Trigger: GGTGGAAGAGAGGCATTTCCATACCCAGGCCTGTGA...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACGACTTCACCTGTTGGTaGGGGCTGTTGGTAGTTTGC +
Preference number: 4 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHDFTCW*GLLVVC
Trigger: GCAAACTACCAACAGCCCCCACCAACAGGTGAAGTC...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAATCTCTCTGCTGGATATaGTCACATGGTGAAGTGTTG +
Preference number: 4 (lower is better)
Translates to: QFCSITEHERWGCLTNQESLCWI*SHGEVL
Trigger: CAACACTTCACCATGTGACCATATCCAGCAGAGAGA...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACTTCTGGATCATGAATTaGAGGAGGGGTGCGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHFWIMN*RRGAWQ
Trigger: CTGCCACGCACCCCTCCTCCAATTCATGATCCAGAA...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR TCA 90 bp TTATTTCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTGAGTTGGAGGCTGAGATCTaGTCCAGGGAGAGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LFHSASGLSIFIELLPIELEAEI*SRESCS
Trigger: GCTGCAGCTCTCCCTGGATCAGATCTCAGCCTCCAA...CTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAAGATCAAACTGGATTTTaGAATGCGATCCGAATTGGG +
Preference number: 4 (lower is better)
Translates to: QFCSITEHERWGCLTNQEDQTGF*NAIRIG
Trigger: CCCAATTCGGATCGCATTTCAAAATCCAGTTTGATC...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp CCAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCTGCCAGTGGGACCCCTaGGGAGCCAGCCTTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PGENSFLHHIQNHFSNLCCQWDP*GASLFF
Trigger: GAAGAAAAGGCTGGCTCCTCAGGGGTCCCACTGGCA...GCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR TCA 90 bp GTTCAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGCACACCTAAATATCTaGCCTGTAGTGATTGTGACA +
Preference number: 4 (lower is better)
Translates to: VQFCSITEHERWGCLTNQAHLNI*PVVIVT
Trigger: TGTCACAATCACTACAGGTCAGATATTTAGGTGTGC...CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR TCA 90 bp GTTCAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGCAACACGGTATAGAGTaGATTAAGAATAGTGCCCGA +
Preference number: 4 (lower is better)
Translates to: VQFCSITEHERWGCLTNQQHGIE*IKNSAR
Trigger: TCGGGCACTATTCTTAATTCACTCTATACCGTGTTG...CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR TCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAAACTAGGCCAGGTGAGTaGCCCCAAAATGGTCAAATG +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQTRPGE*PQNGQM
Trigger: CATTTGACCATTTTGGGGTCACTCACCTGGCCTAGT...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR GCA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGACCAGCAGCAAATGGTaGGCGCAGCGCAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLTSSKW*AQRRWK
Trigger: CTTCCACCTGCGCTGCGCGCACCATTTGCTGCTGGT...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAACTGGTCCTCCGTAGTTaGTACGAAGCCAGTTCACTA +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQLVLRS*YEASSL
Trigger: TAGTGAACTGGCTTCGTAGCAACTACGGAGGACCAG...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CCA 90 bp TCACAATGCAATGTTGTCATTCATCAGTCCTCTCATGTAGTATATATGCACACTTTCACCAGCAGCAAATaGTGCGCGCAGCGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SQCNVVIHQSSHVVYMHTFTSSK*CAQRRW
Trigger: CCACCTGCGCTGCGCGCACCATTTGCTGCTGGTGAA...AGTGTGCATATATACTACATGAGAGGACTGATGAATGACAACATTGCATTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAAATTTTGACTTTGAGCTaGAGAGCCGGGATTTGGCCC +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQILTLS*RAGIWP
Trigger: GGGCCAAATCCCGGCTCTCCAGCTCAAAGTCAAAAT...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp TTATTTCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTGAGGGCCGACCCAGGGTCTaGAGAACTGACCACACTATC +
Preference number: 4 (lower is better)
Translates to: LFHSASGLSIFIELLPIEGRPRV*RTDHTI
Trigger: GATAGTGTGGTCAGTTCTCCAGACCCTGGGTCGGCC...CTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGAAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp TCACAATGCAATGTTGTCATTCATCAGTCCTCTCATGTAGTATATATGCACACTGGTCACCTGATTCACTaGCCGACCCAGGGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: SQCNVVIHQSSHVVYMHTGHLIH*PTQGLE
Trigger: CTCCAGACCCTGGGTCGGCCAGTGAATCAGGTGACC...AGTGTGCATATATACTACATGAGAGGACTGATGAATGACAACATTGCATTGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAAAGAGCCAAAGCAGTTTaGAGAGACAGTAGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQRAKAV*RDSRVV
Trigger: GACCACCCTACTGTCTCTCCAAACTGCTTTGGCTCT...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp CCAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCGGCTGGTTTGGAGGCTaGGATCTGATCCAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: PGENSFLHHIQNHFSNLCGWFGG*DLIQGE
Trigger: CTCTCCCTGGATCAGATCTCAGCCTCCAAACCAGCC...GCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp TCACAATGCAATGTTGTCATTCATCAGTCCTCTCATGTAGTATATATGCACACTACGATATCGGTCACCTaGTTCACTGGCCGACCCAGG +
Preference number: 4 (lower is better)
Translates to: SQCNVVIHQSSHVVYMHTTISVT*FTGRPR
Trigger: CCTGGGTCGGCCAGTGAATCAGGTGACCGATATCGT...AGTGTGCATATATACTACATGAGAGGACTGATGAATGACAACATTGCATTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp CAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCACGATATCGGTCACCTaGTTCACTGGCCGACCCAGG +
Preference number: 4 (lower is better)
Translates to: QVKTHFCTISRTISLIYATISVT*FTGRPR
Trigger: CCTGGGTCGGCCAGTGAATCAGGTGACCGATATCGT...GGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp CTGTGGCGCTCACTTATACAAAACATCGCCCTCTGTATACTCAGGTTTCACATTGATATGGTCACATGGTaGAGTGTTGGCAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LWRSLIQNIALCILRFHIDMVTW*SVGKSR
Trigger: TCTGCTCTTGCCAACACTTCACCATGTGACCATATC...AATGTGAAACCTGAGTATACAGAGGGCGATGTTTTGTATAAGTGAGCGCCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR TCA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACTCAAAATACTGCCGGTaGGAGCCAAAGCAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHSKYCR*EPKQFG
Trigger: TCCAAACTGCTTTGGCTCTCACCGGCAGTATTTTGA...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACCATCCCGTCTCATTTTaGATGTCACCTCAGCACTGT +
Preference number: 4 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHHPVSF*MSPQHC
Trigger: ACAGTGCTGAGGTGACATTCAAAATGAGACGGGATG...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR GCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAAGAGTCTGATTATGGATaGTTTGTCCAGCTGCGAGGT +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQESDYG*FVQLRG
Trigger: ACCTCGCAGCTGGACAAAGCATCCATAATCAGACTC...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGCAGGAAGTACCTGCCTaGCTCACATCGGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLQEVPA*LTSASF
Trigger: GAAGGAGGCCGATGTGAGGCAGGCAGGTACTTCCTG...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp CAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTTCCCAGGAAGTACCTaGCTGCCTCACATCGGCCTC +
Preference number: 4 (lower is better)
Translates to: QVKTHFCTISRTISLIYAFPGST*LPHIGL
Trigger: GAGGCCGATGTGAGGCAGGCAGGTACTTCCTGGGAA...GGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAATTTCATAGGCTTCTCTaGTTTCTGGGGAGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQFHRLL*FLGRPL
Trigger: CAAAGGCCTCCCCAGAAAGCAGAGAAGCCTATGAAA...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAAAGGAGCCCACACACCTaGTTAAGTCACAAAGCATCT +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQRSPHT*LSHKAS
Trigger: AGATGCTTTGTGACTTAAGCAGGTGTGTGGGCTCCT...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp CCAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCACATACTCAAGTCCTaGCTGTTGGCCCTGTGGCGC +
Preference number: 4 (lower is better)
Translates to: PGENSFLHHIQNHFSNLCHILKS*LLALWR
Trigger: GCGCCACAGGGCCAACAGGCAGGACTTGAGTATGTG...GCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CCA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGAAGCCATCCAGGGTCTaGAGCAGATGGGAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLKPSRV*SRWEPS
Trigger: ACTGGGCTCCCATCTGCTCCAGACCCTGGATGGCTT...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CCAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCAAGCCATCCAGGGTCTaGAGCAGATGGGAGCCCAGT +
Preference number: 4 (lower is better)
Translates to: PGENSFLHHIQNHFSNLCKPSRV*SRWEPS
Trigger: ACTGGGCTCCCATCTGCTCCAGACCCTGGATGGCTT...GCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp CCAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCCGGTCAGCTCTACCTaGGAAAGACCCAAGTGGACT +
Preference number: 4 (lower is better)
Translates to: PGENSFLHHIQNHFSNLCPVSST*ERPKWT
Trigger: AGTCCACTTGGGTCTTTCTCAGGTAGAGCTGACCGG...GCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp CAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCCCGGTCAGCTCTACCTaGGAAAGACCCAAGTGGACT +
Preference number: 4 (lower is better)
Translates to: QVKTHFCTISRTISLIYAPVSST*ERPKWT
Trigger: AGTCCACTTGGGTCTTTCTCAGGTAGAGCTGACCGG...GGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp TTATTTCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTGAGATGGATCCTGTGGACTaGAGCGATGTGAGGCATGCT +
Preference number: 4 (lower is better)
Translates to: LFHSASGLSIFIELLPIEMDPVD*SDVRHA
Trigger: AGCATGCCTCACATCGCTTCAGTCCACAGGATCCAT...CTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp GTTCAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGATAATGGATACCAGGTaGAAACTCATTTTTGCACCA +
Preference number: 4 (lower is better)
Translates to: VQFCSITEHERWGCLTNQIMDTR*KLIFAP
Trigger: TGGTGCAAAAATGAGTTTTCACCTGGTATCCATTAT...CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAAAAGCTTTGGGACGAGTaGGGTGATTTTAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQKLWDE*GDFRIL
Trigger: CAGGATTCTAAAATCACCTCACTCGTCCCAAAGCTT...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR GCA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACGGGCTGTTGGTAGTTTaGAAAACACAGGGAGTGTTT +
Preference number: 4 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHGLLVV*KTQGVF
Trigger: AAACACTCCCTGTGTTTTGCAAACTACCAACAGCCC...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp GTTCAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGCATTTCTCTAATTTATaGCTGAACCAAATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: VQFCSITEHERWGCLTNQHFSNL*LNQMSW
Trigger: CCAGCTCATTTGGTTCAGGCATAAATTAGAGAAATG...CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGTCTTCTACTGCCAGCTaGGAACCCTGGTCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLSSTAS*EPWSSE
Trigger: TTCCGAGGACCAGGGTTCGCAGCTGGCAGTAGAAGA...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CCA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGGCTGACGATACAGTGTaGCCTGGAGGAGCGACTGTT +
Preference number: 4 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLADDTV*PGGATV
Trigger: AACAGTCGCTCCTCCAGGCCACACTGTATCGTCAGC...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGTGGGGGTGGAGCTGCTaGTATAGGAGAAGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLWGWSC*YRRRLV
Trigger: AACCAGCCTTCTCCTATACCAGCAGCTCCACCCCCA...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CCAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCTTCTGTTGTCAGTCATaGTGGGGGTGGAGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: PGENSFLHHIQNHFSNLCFCCQS*WGWSCW
Trigger: CCAGCAGCTCCACCCCCACCATGACTGACAACAGAA...GCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp TCACAATGCAATGTTGTCATTCATCAGTCCTCTCATGTAGTATATATGCACACTTGGAGAGCCGGGATTTaGCCCCCTTTCTGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: SQCNVVIHQSSHVVYMHTWRAGI*PPFCCQ
Trigger: CTGACAACAGAAAGGGGGCCAAATCCCGGCTCTCCA...AGTGTGCATATATACTACATGAGAGGACTGATGAATGACAACATTGCATTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp TCAAATGTGTATTCAGAAGATTTCTTTATCTGTGCTGCCATCCATCAAACTTACGGCCGACCCAGGGTCTaGAGAACTGACCACACTATC +
Preference number: 4 (lower is better)
Translates to: SNVYSEDFFICAAIHQTYGRPRV*RTDHTI
Trigger: GATAGTGTGGTCAGTTCTCCAGACCCTGGGTCGGCC...GTAAGTTTGATGGATGGCAGCACAGATAAAGAAATCTTCTGAATACACATTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CCA 90 bp TTATTTCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTGAGGACTTCACCTGTTGGTaGGGGCTGTTGGTAGTTTGC +
Preference number: 4 (lower is better)
Translates to: LFHSASGLSIFIELLPIEDFTCW*GLLVVC
Trigger: GCAAACTACCAACAGCCCCCACCAACAGGTGAAGTC...CTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp TTATTTCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTGAGGCAAGAGCAGAGCCATaGCAGACTTCACCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: LFHSASGLSIFIELLPIEARAEP*QTSPVG
Trigger: ACCAACAGGTGAAGTCTGCCATGGCTCTGCTCTTGC...CTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAATCTCTCTGCTGGATATaGTCACATGGTGAAGTGTTG +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQSLCWI*SHGEVL
Trigger: CAACACTTCACCATGTGACCATATCCAGCAGAGAGA...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp TTATTTCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTGAGTCCTTGTGCTGGGTCTaGTTGCATCCTCAGATGGGA +
Preference number: 4 (lower is better)
Translates to: LFHSASGLSIFIELLPIESLCWV*LHPQMG
Trigger: TCCCATCTGAGGATGCAACCAGACCCAGCACAAGGA...CTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp TTATTTCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTGAGCTTGTGTCCTTGTGCTaGGTCTGGTTGCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: LFHSASGLSIFIELLPIELVSLC*VWLHPQ
Trigger: CTGAGGATGCAACCAGACCCAGCACAAGGACACAAG...CTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CCAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCGCCAGCTGCGAACCCTaGTCCTCGGAAAATCGACAT +
Preference number: 4 (lower is better)
Translates to: PGENSFLHHIQNHFSNLCASCEP*SSENRH
Trigger: ATGTCGATTTTCCGAGGACCAGGGTTCGCAGCTGGC...GCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR TCA 90 bp CAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGGAGTCCAGAAAGATaGGCTTCATGTCCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: QVKTHFCTISRTISLIYAWSPER*ASCPGW
Trigger: CCAGCCTGGACATGAAGCTCATCTTTCTGGACTCCA...GGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp CAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCATGGATCCTGTGGACTaGAGCGATGTGAGGCATGCT +
Preference number: 4 (lower is better)
Translates to: QVKTHFCTISRTISLIYAMDPVD*SDVRHA
Trigger: AGCATGCCTCACATCGCTTCAGTCCACAGGATCCAT...GGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp CAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCCTATCTTCATCCCAATaGCCTCGCCCATGGATCCTG +
Preference number: 4 (lower is better)
Translates to: QVKTHFCTISRTISLIYALSSSQ*PRPWIL
Trigger: CAGGATCCATGGGCGAGGTCATTGGGATGAAGATAG...GGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp CCAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCAGGGTCTGGAGAACTaGCCACACTATCTTCATCCC +
Preference number: 4 (lower is better)
Translates to: PGENSFLHHIQNHFSNLCQGLEN*PHYLHP
Trigger: GGGATGAAGATAGTGTGGTCAGTTCTCCAGACCCTG...GCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp CTGTGGCGCTCACTTATACAAAACATCGCCCTCTGTATACTCAGGTTTCACATTTCATGTGGGCTACTTTaGTACTGCTCAGTACGATAT +
Preference number: 4 (lower is better)
Translates to: LWRSLIQNIALCILRFHISCGLL*YCSVRY
Trigger: ATATCGTACTGAGCAGTATCAAAGTAGCCCACATGA...AATGTGAAACCTGAGTATACAGAGGGCGATGTTTTGTATAAGTGAGCGCCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR GCA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACATTTTTCCCTCTCTCTaGTGGATATGGTCACATGGT +
Preference number: 4 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHIFPSL*WIWSHG
Trigger: ACCATGTGACCATATCCAGCAGAGAGAGGGAAAAAT...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp CCAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCTCCCTTGTGTCCTTGTaGTGGGTCTGGTTGCATCCT +
Preference number: 4 (lower is better)
Translates to: PGENSFLHHIQNHFSNLCSLVSL*WVWLHP
Trigger: AGGATGCAACCAGACCCAGCACAAGGACACAAGGGA...GCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAAACATTGGCACATATGTaGTTTGAAACGTTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: QFCSITEHERWGCLTNQETLAHM*FETFSN
Trigger: GTTTGAAAACGTTTCAAAGCACATATGTGCCAATGT...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp GTTCAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGACATTGGCACATATGTaGTTTGAAACGTTTTCAAAC +
Preference number: 4 (lower is better)
Translates to: VQFCSITEHERWGCLTNQTLAHM*FETFSN
Trigger: GTTTGAAAACGTTTCAAAGCACATATGTGCCAATGT...CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CCAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCCTCCTTCACAGGCCTaGGTATGGAAATGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: PGENSFLHHIQNHFSNLCPPSQA*VWKCLS
Trigger: AGAGAGGCATTTCCATACCCAGGCCTGTGAAGGAGG...GCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp TCACAATGCAATGTTGTCATTCATCAGTCCTCTCATGTAGTATATATGCACACTGCAGACTTCACCTGTTaGTGGGGGCTGTTGGTAGTT +
Preference number: 4 (lower is better)
Translates to: SQCNVVIHQSSHVVYMHTADFTC*WGLLVV
Trigger: AACTACCAACAGCCCCCACCAACAGGTGAAGTCTGC...AGTGTGCATATATACTACATGAGAGGACTGATGAATGACAACATTGCATTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGGCAGACTTCACCTGTTaGTGGGGGCTGTTGGTAGTT +
Preference number: 4 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLADFTC*WGLLVV
Trigger: AACTACCAACAGCCCCCACCAACAGGTGAAGTCTGC...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGGCAAGAGCAGAGCCATaGCAGACTTCACCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLARAEP*QTSPVG
Trigger: ACCAACAGGTGAAGTCTGCCATGGCTCTGCTCTTGC...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp TCACAATGCAATGTTGTCATTCATCAGTCCTCTCATGTAGTATATATGCACACTCACATGGTGAAGTGTTaGCAAGAGCAGAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: SQCNVVIHQSSHVVYMHTHMVKC*QEQSHG
Trigger: GCCATGGCTCTGCTCTTGCCAACACTTCACCATGTG...AGTGTGCATATATACTACATGAGAGGACTGATGAATGACAACATTGCATTGTGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAAGGTTGCATCCTCAGATaGGAAGTTACATCAAAGTGT +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQGCILR*EVTSKC
Trigger: ACACTTTGATGTAACTTCCCATCTGAGGATGCAACC...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp TCACAATGCAATGTTGTCATTCATCAGTCCTCTCATGTAGTATATATGCACACTCTTGTGTCCTTGTGCTaGGTCTGGTTGCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: SQCNVVIHQSSHVVYMHTLVSLC*VWLHPQ
Trigger: CTGAGGATGCAACCAGACCCAGCACAAGGACACAAG...AGTGTGCATATATACTACATGAGAGGACTGATGAATGACAACATTGCATTGTGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp TCACAATGCAATGTTGTCATTCATCAGTCCTCTCATGTAGTATATATGCACACTCCCGGCTCCCTTTTCTaGATCATGAATTGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: SQCNVVIHQSSHVVYMHTPGSLF*IMNWRR
Trigger: CCTCCTCCAATTCATGATCCAGAAAAGGGAGCCGGG...AGTGTGCATATATACTACATGAGAGGACTGATGAATGACAACATTGCATTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CCA 90 bp CCAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCGCGATCCACCGAATTTaGGCAATCCTGAGGGTCGTT +
Preference number: 4 (lower is better)
Translates to: PGENSFLHHIQNHFSNLCAIHRI*AILRVV
Trigger: AACGACCCTCAGGATTGCCCAAATTCGGTGGATCGC...GCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CCA 90 bp TTATTTCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTGAGCTGATCCACCGAATTTaGGCGATCCACCGAATTTGG +
Preference number: 4 (lower is better)
Translates to: LFHSASGLSIFIELLPIELIHRI*AIHRIW
Trigger: CCAAATTCGGTGGATCGCCCAAATTCGGTGGATCAG...CTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGAAATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CCA 90 bp CTGTGGCGCTCACTTATACAAAACATCGCCCTCTGTATACTCAGGTTTCACATTAAAGCTTATTTTAAGTaGGATTCTCTGCCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LWRSLIQNIALCILRFHIKAYFK*DSLPRG
Trigger: GCCTCTGGGCAGAGAATCCCACTTAAAATAAGCTTT...AATGTGAAACCTGAGTATACAGAGGGCGATGTTTTGTATAAGTGAGCGCCACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR TCA 90 bp TCAAATGTGTATTCAGAAGATTTCTTTATCTGTGCTGCCATCCATCAAACTTACCTCTATCACAGAACATaGACGCTGGGGCTGCCTTAC +
Preference number: 4 (lower is better)
Translates to: SNVYSEDFFICAAIHQTYLYHRT*TLGLPY
Trigger: GTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAG...GTAAGTTTGATGGATGGCAGCACAGATAAAGAAATCTTCTGAATACACATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR GCA 90 bp TTATTTCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTGAGCATCTCGTCGTGGTCTaGCGGGTGAATGTATTCATA +
Preference number: 4 (lower is better)
Translates to: LFHSASGLSIFIELLPIEHLVVV*RVNVFI
Trigger: TATGAATACATTCACCCGGCAGACCACGACGAGATG...CTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp CAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCCATAGCAGAGAGAGCTaGGGTCCGAAAACTGTCTGT +
Preference number: 4 (lower is better)
Translates to: QVKTHFCTISRTISLIYAHSRES*GPKTVC
Trigger: ACAGACAGTTTTCGGACCGCAGCTCTCTCTGCTATG...GGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAAGAAAGCAAAGTCCCATaGAGCAAAGTTGCAATAAAC +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQESKVP*SKVAIN
Trigger: GTTTATTGCAACTTTGCTGCATGGGACTTTGCTTTC...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CCA 90 bp TTATTTCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTGAGCATGATCTTCCCATCTaGGGCTACCACGAAGATGAA +
Preference number: 4 (lower is better)
Translates to: LFHSASGLSIFIELLPIEHDLPI*GYHEDE
Trigger: TTCATCTTCGTGGTAGCCCCAGATGGGAAGATCATG...CTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp TCACAATGCAATGTTGTCATTCATCAGTCCTCTCATGTAGTATATATGCACACTGGAACCTGTAGTACTTaGTGGTCACCTGTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: SQCNVVIHQSSHVVYMHTGTCST*WSPVPS
Trigger: TGAAGGGACAGGTGACCACCAAGTACTACAGGTTCC...AGTGTGCATATATACTACATGAGAGGACTGATGAATGACAACATTGCATTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGGGAACCTGTAGTACTTaGTGGTCACCTGTCCCTTCA +
Preference number: 4 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLGTCST*WSPVPS
Trigger: TGAAGGGACAGGTGACCACCAAGTACTACAGGTTCC...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp TCACAATGCAATGTTGTCATTCATCAGTCCTCTCATGTAGTATATATGCACACTATTTTGACTTTGAGCTaGAGAGCCGGGATTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SQCNVVIHQSSHVVYMHTILTLS*RAGIWP
Trigger: GGGCCAAATCCCGGCTCTCCAGCTCAAAGTCAAAAT...AGTGTGCATATATACTACATGAGAGGACTGATGAATGACAACATTGCATTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp TCAAATGTGTATTCAGAAGATTTCTTTATCTGTGCTGCCATCCATCAAACTTACTCACAGGCCTGGGTATaGAAATGCCTCTCTTCCACC +
Preference number: 4 (lower is better)
Translates to: SNVYSEDFFICAAIHQTYSQAWV*KCLSST
Trigger: GGTGGAAGAGAGGCATTTCCATACCCAGGCCTGTGA...GTAAGTTTGATGGATGGCAGCACAGATAAAGAAATCTTCTGAATACACATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CCA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACGAGTTTCAATTTTGCTaGGTTCATGTGGGCTACTTT +
Preference number: 4 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHEFQFC*VHVGYF
Trigger: AAAGTAGCCCACATGAACCCAGCAAAATTGAAACTC...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp TCAAATGTGTATTCAGAAGATTTCTTTATCTGTGCTGCCATCCATCAAACTTACCACATGGTGAAGTGTTaGCAAGAGCAGAGCCATGGC +
Preference number: 4 (lower is better)
Translates to: SNVYSEDFFICAAIHQTYHMVKC*QEQSHG
Trigger: GCCATGGCTCTGCTCTTGCCAACACTTCACCATGTG...GTAAGTTTGATGGATGGCAGCACAGATAAAGAAATCTTCTGAATACACATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CCA 90 bp TTATTTCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTGAGTCCGAGATAGTGCGGTaGGACTGTTGTCATAGTCAT +
Preference number: 4 (lower is better)
Translates to: LFHSASGLSIFIELLPIESEIVR*DCCHSH
Trigger: ATGACTATGACAACAGTCCCACCGCACTATCTCGGA...CTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGAAATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAAAAATGCGATCCGAATTaGGACTACTTATCCGAGATA +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQKCDPN*DYLSEI
Trigger: TATCTCGGATAAGTAGTCCCAATTCGGATCGCATTT...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCAGAGCCAAAGCAGTTTaGAGAGACAGTAGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: QVKTHFCTISRTISLIYARAKAV*RDSRVV
Trigger: GACCACCCTACTGTCTCTCCAAACTGCTTTGGCTCT...GGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAAGTGTTTGAGGATCACTaGATAGTCACAATGCAATGT +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQVFEDH*IVTMQC
Trigger: ACATTGCATTGTGACTATCCAGTGATCCTCAAACAC...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp TCACAATGCAATGTTGTCATTCATCAGTCCTCTCATGTAGTATATATGCACACTACAGAACATGAACGCTaGGGCTGCCTTACAAACCAG +
Preference number: 4 (lower is better)
Translates to: SQCNVVIHQSSHVVYMHTTEHER*GCLTNQ
Trigger: CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGT...AGTGTGCATATATACTACATGAGAGGACTGATGAATGACAACATTGCATTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CTGTGGCGCTCACTTATACAAAACATCGCCCTCTGTATACTCAGGTTTCACATTATGACAAAAGACTTGTaGACCGAAGCACACCTAAAT +
Preference number: 4 (lower is better)
Translates to: LWRSLIQNIALCILRFHIMTKDL*TEAHLN
Trigger: ATTTAGGTGTGCTTCGGTCCACAAGTCTTTTGTCAT...AATGTGAAACCTGAGTATACAGAGGGCGATGTTTTGTATAAGTGAGCGCCACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369208.8
3UTR CAA 72 bp GCCAGTACATTCCCTTCCTTAAATATGGCAAGAGTTTaGGGCACGGGACTCCTAGGAAATATTATCTATGAA +
Preference number: 4 (lower is better)
Translates to: ASTFPSLNMARV*GTGLLGNIIYE
Trigger: TTCATAGATAATATTTCCTAGGAGTCCCGTGCCCAAAACTCTTGCCATATTTAAGGAAGGGAATGTACTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR TCA 90 bp TCACAATGCAATGTTGTCATTCATCAGTCCTCTCATGTAGTATATATGCACACTTCTCTGAGATGTACATaGTCTTCCCATCTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: SQCNVVIHQSSHVVYMHTSLRCT*SSHLGL
Trigger: TAGCCCCAGATGGGAAGATCATGTACATCTCAGAGA...AGTGTGCATATATACTACATGAGAGGACTGATGAATGACAACATTGCATTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp CCAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCTCAAAATACTGCCGGTaGGAGCCAAAGCAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: PGENSFLHHIQNHFSNLCSKYCR*EPKQFG
Trigger: TCCAAACTGCTTTGGCTCTCACCGGCAGTATTTTGA...GCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp TTATTTCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTGAGAGTTACATCAAAGTGTaGGCCATTACAGCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: LFHSASGLSIFIELLPIESYIKV*AITAQG
Trigger: TCCTTGGGCTGTAATGGCTCACACTTTGATGTAACT...CTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGAAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACATGACATCTTCATTATaGGGAAATATGTTGCTGCAC +
Preference number: 4 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHMTSSL*GNMLLH
Trigger: GTGCAGCAACATATTTCCTCATAATGAAGATGTCAT...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR TCA 90 bp CCAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTAGAGAAGGAACTCTaGGCAAACCCCTATTTGGCA +
Preference number: 4 (lower is better)
Translates to: PGENSFLHHIQNHFSNLCLEKEL*ANPYLA
Trigger: TGCCAAATAGGGGTTTGCTCAGAGTTCCTTCTCTAG...GCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR GCA 90 bp CAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCCATCTCGTCGTGGTCTaGCGGGTGAATGTATTCATA +
Preference number: 4 (lower is better)
Translates to: QVKTHFCTISRTISLIYAHLVVV*RVNVFI
Trigger: TATGAATACATTCACCCGGCAGACCACGACGAGATG...GGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp CAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCAGTAGGGTGGTCTCCTaGTGTCTGATGAGGAGATAT +
Preference number: 4 (lower is better)
Translates to: QVKTHFCTISRTISLIYASRVVS*CLMRRY
Trigger: ATATCTCCTCATCAGACAGCAGGAGACCACCCTACT...GGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGTTAATGGAAGCCAGTTaGTCTGAGGGGGCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLLMEAS*SEGAFL
Trigger: AAGGAAAGCCCCCTCAGACCAACTGGCTTCCATTAA...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAACACATGTTGTCACATTaGCACATATGTGCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQHMLSH*HICALK
Trigger: TTTCAAAGCACATATGTGCCAATGTGACAACATGTG...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACCACATGTTGTCACATTaGCACATATGTGCTTTGAAA +
Preference number: 4 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHHMLSH*HICALK
Trigger: TTTCAAAGCACATATGTGCCAATGTGACAACATGTG...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp CCAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCAAAGACCAGCGGGGGTaGACGGAAAATATGTTCTTT +
Preference number: 4 (lower is better)
Translates to: PGENSFLHHIQNHFSNLCKDQRG*TENMFF
Trigger: AAAGAACATATTTTCCGTTCACCCCCGCTGGTCTTT...GCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp TTATTTCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTGAGGATCAAACTGGATTTTaGAATGCGATCCGAATTGGG +
Preference number: 4 (lower is better)
Translates to: LFHSASGLSIFIELLPIEDQTGF*NAIRIG
Trigger: CCCAATTCGGATCGCATTTCAAAATCCAGTTTGATC...CTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGCGACATAATAATCCCTaGCGTTTGCTCTTCAGTCTC +
Preference number: 4 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLRHNNP*RLLFSL
Trigger: GAGACTGAAGAGCAAACGTCAGGGATTATTATGTCG...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR TCA 90 bp CCAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCACCCCTATTTGGCAATaGCCACACTCTCACTTTTTG +
Preference number: 4 (lower is better)
Translates to: PGENSFLHHIQNHFSNLCTPIWQ*PHSHFL
Trigger: CAAAAAGTGAGAGTGTGGTCATTGCCAAATAGGGGT...GCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR GCA 90 bp CTGTGGCGCTCACTTATACAAAACATCGCCCTCTGTATACTCAGGTTTCACATTGTGAAAACTCATTTTTaGACCATATCCAGAACCATT +
Preference number: 4 (lower is better)
Translates to: LWRSLIQNIALCILRFHIVKTHF*TISRTI
Trigger: AATGGTTCTGGATATGGTGCAAAAATGAGTTTTCAC...AATGTGAAACCTGAGTATACAGAGGGCGATGTTTTGTATAAGTGAGCGCCACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR GCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAATTTCTTTATCTGTGCTaGCATCCATCAAACTTACTT +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQFLYLC*HPSNLL
Trigger: AAGTAAGTTTGATGGATGGCAGCACAGATAAAGAAA...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CCA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGTTTGCTGGGTTCATGTaGGCTACTTTGATACTGCTC +
Preference number: 4 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLFAGFM*ATLILL
Trigger: GAGCAGTATCAAAGTAGCCCACATGAACCCAGCAAA...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTTTGCTGGGTTCATGTaGGCTACTTTGATACTGCTC +
Preference number: 4 (lower is better)
Translates to: QVKTHFCTISRTISLIYAFAGFM*ATLILL
Trigger: GAGCAGTATCAAAGTAGCCCACATGAACCCAGCAAA...GGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCGTGATTTTAGAATCCTaGTCCTCCGTAGTTGCTACG +
Preference number: 4 (lower is better)
Translates to: QVKTHFCTISRTISLIYAVILES*SSVVAT
Trigger: CGTAGCAACTACGGAGGACCAGGATTCTAAAATCAC...GGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAATCAGTTCATTTTCCCTaGTTCTTAAGTTTCCATTTC +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQSVHFP*FLSFHF
Trigger: GAAATGGAAACTTAAGAACCAGGGAAAATGAACTGA...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CCA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAAGTATGGCAGGTGAAATaGGCAATAAAGATACTTATT +
Preference number: 4 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQVWQVK*AIKILI
Trigger: AATAAGTATCTTTATTGCCCATTTCACCTGCCATAC...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CCA 90 bp CTGTGGCGCTCACTTATACAAAACATCGCCCTCTGTATACTCAGGTTTCACATTCTAGGGAACCAAATCTaGGCATTCAAACATTTTATA +
Preference number: 4 (lower is better)
Translates to: LWRSLIQNIALCILRFHILGNQI*AFKHFI
Trigger: TATAAAATGTTTGAATGCCCAGATTTGGTTCCCTAG...AATGTGAAACCTGAGTATACAGAGGGCGATGTTTTGTATAAGTGAGCGCCACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CCA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACCGGTATTTGAAATATTaGCGATCAGTATCTTTTCTC +
Preference number: 4 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHRYLKY*RSVSFL
Trigger: GAGAAAAGATACTGATCGCCAATATTTCAAATACCG...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR TCA 90 bp TCAAATGTGTATTCAGAAGATTTCTTTATCTGTGCTGCCATCCATCAAACTTACAAAGACCAGCGGGGGTaGACGGAAAATATGTTCTTT +
Preference number: 4 (lower is better)
Translates to: SNVYSEDFFICAAIHQTYKDQRG*TENMFF
Trigger: AAAGAACATATTTTCCGTTCACCCCCGCTGGTCTTT...GTAAGTTTGATGGATGGCAGCACAGATAAAGAAATCTTCTGAATACACATTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR TCA 90 bp TCACAATGCAATGTTGTCATTCATCAGTCCTCTCATGTAGTATATATGCACACTTCATGTGGGCTACTTTaGTACTGCTCAGTACGATAT +
Preference number: 4 (lower is better)
Translates to: SQCNVVIHQSSHVVYMHTSCGLL*YCSVRY
Trigger: ATATCGTACTGAGCAGTATCAAAGTAGCCCACATGA...AGTGTGCATATATACTACATGAGAGGACTGATGAATGACAACATTGCATTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp TCACAATGCAATGTTGTCATTCATCAGTCCTCTCATGTAGTATATATGCACACTCAGAATGATCAGTCTTaGCAACTCATAGCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: SQCNVVIHQSSHVVYMHTQNDQS*QLIAES
Trigger: ACTCTCTGCTATGAGTTGTCAAGACTGATCATTCTG...AGTGTGCATATATACTACATGAGAGGACTGATGAATGACAACATTGCATTGTGA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGCAGAATGATCAGTCTTaGCAACTCATAGCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLQNDQS*QLIAES
Trigger: ACTCTCTGCTATGAGTTGTCAAGACTGATCATTCTG...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp TTATTTCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTGAGCACACTCTCACTTTTTaGGTTAAGCACTATCTGTAC +
Preference number: 4 (lower is better)
Translates to: LFHSASGLSIFIELLPIEHTLTF*VKHYLY
Trigger: GTACAGATAGTGCTTAACTCAAAAAGTGAGAGTGTG...CTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGAAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR GCA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGATTTTTCCCTCTCTCTaGTGGATATGGTCACATGGT +
Preference number: 4 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLIFPSL*WIWSHG
Trigger: ACCATGTGACCATATCCAGCAGAGAGAGGGAAAAAT...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CCAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCGGTTGCATCCTCAGATaGGAAGTTACATCAAAGTGT +
Preference number: 4 (lower is better)
Translates to: PGENSFLHHIQNHFSNLCGCILR*EVTSKC
Trigger: ACACTTTGATGTAACTTCCCATCTGAGGATGCAACC...GCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCACTATTATTCCTAATTaGAAGCCGAAAACTGCCCCC +
Preference number: 4 (lower is better)
Translates to: QVKTHFCTISRTISLIYATIIPN*KPKTAP
Trigger: GGGGGCAGTTTTCGGCTTCCAATTAGGAATAATAGT...GGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CCA 90 bp CCAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCAAGAATAGTGCCCGATaGAAACAATCTAGCCCTATG +
Preference number: 4 (lower is better)
Translates to: PGENSFLHHIQNHFSNLCKNSAR*KQSSPM
Trigger: CATAGGGCTAGATTGTTTCCATCGGGCACTATTCTT...GCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR TCA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGAATAGTTTGTGTGTTTaGGGATCACTGGATAGTCAC +
Preference number: 4 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLNSLCV*GSLDSH
Trigger: GTGACTATCCAGTGATCCTCAAACACACAAACTATT...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp TTATTTCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTGAGGGCACATATGTGCTTTaGAACGTTTTCAAACACTTA +
Preference number: 4 (lower is better)
Translates to: LFHSASGLSIFIELLPIEGTYVL*NVFKHL
Trigger: TAAGTGTTTGAAAACGTTTCAAAGCACATATGTGCC...CTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp TCACAATGCAATGTTGTCATTCATCAGTCCTCTCATGTAGTATATATGCACACTGTCTTGTACTATAATTaGTCCTCATCCCCCATAAGA +
Preference number: 4 (lower is better)
Translates to: SQCNVVIHQSSHVVYMHTVLYYN*SSSPIR
Trigger: TCTTATGGGGGATGAGGATCAATTATAGTACAAGAC...AGTGTGCATATATACTACATGAGAGGACTGATGAATGACAACATTGCATTGTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR GCA 90 bp TCACAATGCAATGTTGTCATTCATCAGTCCTCTCATGTAGTATATATGCACACTAACTGGATTTTGAAATaGGATCCGAATTGGGACTAC +
Preference number: 4 (lower is better)
Translates to: SQCNVVIHQSSHVVYMHTNWILK*DPNWDY
Trigger: GTAGTCCCAATTCGGATCGCATTTCAAAATCCAGTT...AGTGTGCATATATACTACATGAGAGGACTGATGAATGACAACATTGCATTGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp TTATTTCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTGAGCATTTCTCTAATTTATaGCTGAACCAAATGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LFHSASGLSIFIELLPIEHFSNL*LNQMSW
Trigger: CCAGCTCATTTGGTTCAGGCATAAATTAGAGAAATG...CTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGAAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp CAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCGAGTTTCAATTTTGCTaGGTTCATGTGGGCTACTTT +
Preference number: 4 (lower is better)
Translates to: QVKTHFCTISRTISLIYAEFQFC*VHVGYF
Trigger: AAAGTAGCCCACATGAACCCAGCAAAATTGAAACTC...GGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp TCACAATGCAATGTTGTCATTCATCAGTCCTCTCATGTAGTATATATGCACACTAAATGCGATCCGAATTaGGACTACTTATCCGAGATA +
Preference number: 4 (lower is better)
Translates to: SQCNVVIHQSSHVVYMHTKCDPN*DYLSEI
Trigger: TATCTCGGATAAGTAGTCCCAATTCGGATCGCATTT...AGTGTGCATATATACTACATGAGAGGACTGATGAATGACAACATTGCATTGTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CCA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGGTGTTTGAGGATCACTaGATAGTCACAATGCAATGT +
Preference number: 4 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLVFEDH*IVTMQC
Trigger: ACATTGCATTGTGACTATCCAGTGATCCTCAAACAC...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
3UTR CAA 72 bp TTCCCAAGAAAGATTGGGGAAACTTCATTCACTTCTTaGGTCATCCAAATTTTTAAAGTAGGTATGGCAGGT +
Preference number: 4 (lower is better)
Translates to: FPRKIGETSFTS*VIQIFKVGMAG
Trigger: ACCTGCCATACCTACTTTAAAAATTTGGATGACCAAAGAAGTGAATGAAGTTTCCCCAATCTTTCTTGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR TCA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGATAATGGATACCAGGTaGAAACTCATTTTTGCACCA +
Preference number: 4 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLIMDTR*KLIFAP
Trigger: TGGTGCAAAAATGAGTTTTCACCTGGTATCCATTAT...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGGGCACATATGTGCTTTaGAACGTTTTCAAACACTTA +
Preference number: 4 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLGTYVL*NVFKHL
Trigger: TAAGTGTTTGAAAACGTTTCAAAGCACATATGTGCC...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR TCA 90 bp TCAAATGTGTATTCAGAAGATTTCTTTATCTGTGCTGCCATCCATCAAACTTACACTTGGTTTAGATCTTaGGGGCGGAAATCTTGTATT +
Preference number: 4 (lower is better)
Translates to: SNVYSEDFFICAAIHQTYTWFRS*GRKSCI
Trigger: AATACAAGATTTCCGCCCTCAAGATCTAAACCAAGT...GTAAGTTTGATGGATGGCAGCACAGATAAAGAAATCTTCTGAATACACATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR GCA 90 bp TCAAATGTGTATTCAGAAGATTTCTTTATCTGTGCTGCCATCCATCAAACTTACAACTGGATTTTGAAATaGGATCCGAATTGGGACTAC +
Preference number: 4 (lower is better)
Translates to: SNVYSEDFFICAAIHQTYNWILK*DPNWDY
Trigger: GTAGTCCCAATTCGGATCGCATTTCAAAATCCAGTT...GTAAGTTTGATGGATGGCAGCACAGATAAAGAAATCTTCTGAATACACATTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR TCA 90 bp TCAAATGTGTATTCAGAAGATTTCTTTATCTGTGCTGCCATCCATCAAACTTACTTGCAAGACGGTATTTaGAATATTGGCGATCAGTAT +
Preference number: 4 (lower is better)
Translates to: SNVYSEDFFICAAIHQTYLQDGI*NIGDQY
Trigger: ATACTGATCGCCAATATTTCAAATACCGTCTTGCAA...GTAAGTTTGATGGATGGCAGCACAGATAAAGAAATCTTCTGAATACACATTTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR GCA 90 bp CAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCGTGAAAACTCATTTTTaGACCATATCCAGAACCATT +
Preference number: 4 (lower is better)
Translates to: QVKTHFCTISRTISLIYAVKTHF*TISRTI
Trigger: AATGGTTCTGGATATGGTGCAAAAATGAGTTTTCAC...GGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR GCA 90 bp CAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCAAGGCAATCATTTATTaGATCCCGTCTCATTTTGAA +
Preference number: 4 (lower is better)
Translates to: QVKTHFCTISRTISLIYAKAIIY*IPSHFE
Trigger: TTCAAAATGAGACGGGATGCAATAAATGATTGCCTT...GGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CCA 90 bp TCACAATGCAATGTTGTCATTCATCAGTCCTCTCATGTAGTATATATGCACACTAGGAGAAATAAAAATTaGAGCACACTACCCTTTTCT +
Preference number: 4 (lower is better)
Translates to: SQCNVVIHQSSHVVYMHTRRNKN*STLPFS
Trigger: AGAAAAGGGTAGTGTGCTCCAATTTTTATTTCTCCT...AGTGTGCATATATACTACATGAGAGGACTGATGAATGACAACATTGCATTGTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS GCA 90 bp AGGGGCAAGGCTGCGCGAGAGCCCCACCAGGGCTCCCTCCCGGCCTaGGGCGTTCCCAGGAAGTACCTGCCTGCCTCACATCGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: RGKAAREPHQGSLPA*GVPRKYLPASHRPP
Trigger: AGGAGGCCGATGTGAGGCAGGCAGGTACTTCCTGGGAACGCCGCAGGCCGGGAGGGAGCCCTGGTGGGGCTCTCGCGCAGCCTTGCCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262901.4
ENST00000369208.8
ENST00000505753.1
CDS GCA 90 bp GATGCGTCGTGCTGGGAGCCAGGCCTATCGGCGGGGTCCAGAAGCTaGGGAGAGGCCGTGTCGGTCAAGGGACTTCCGCCCCACTGGCTG +
Preference number: 5 (lower is better)
Translates to: DASCWEPGLSAGSRS*GEAVSVKGLPPHWL
Trigger: CAGCCAGTGGGGCGGAAGTCCCTTGACCGACACGGCCTCTCCGCAGCTTCTGGACCCCGCCGATAGGCCTGGCTCCCAGCACGACGCATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262901.4
ENST00000369208.8
ENST00000505753.1
CDS CCA 90 bp GGAGCAGATGGGAGCCCAGTTCTCGGCCAACGTTGTCCAGGGGGCTaGTCCGACTTGAGTGGCCCCACGCCTCGCCGAGCCCTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: GADGSPVLGQRCPGG*SDLSGPTPRRALLG
Trigger: TCCCAGAAGGGCTCGGCGAGGCGTGGGGCCACTCAAGTCGGACCAGCCCCCTGGACAACGTTGGCCGAGAACTGGGCTCCCATCTGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS TCA 90 bp GGAGCCCAGTTCTCGGCCAACGTTGTCCAGGGGGCTGGTCCGACTTaGGTGGCCCCACGCCTCGCCGAGCCCTTCTGGGAACACCACTCT +
Preference number: 5 (lower is better)
Translates to: GAQFSANVVQGAGPT*VAPRLAEPFWEHHS
Trigger: AGAGTGGTGTTCCCAGAAGGGCTCGGCGAGGCGTGGGGCCACTCAAGTCGGACCAGCCCCCTGGACAACGTTGGCCGAGAACTGGGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CCA 90 bp CCCAGTTCTCGGCCAACGTTGTCCAGGGGGCTGGTCCGACTTGAGTaGCCCCACGCCTCGCCGAGCCCTTCTGGGAACACCACTCTCATT +
Preference number: 5 (lower is better)
Translates to: PSSRPTLSRGLVRLE*PHASPSPSGNTTLI
Trigger: AATGAGAGTGGTGTTCCCAGAAGGGCTCGGCGAGGCGTGGGGCCACTCAAGTCGGACCAGCCCCCTGGACAACGTTGGCCGAGAACTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS GCA 90 bp ATAGCAGAGAGAGCTGCGGTCCGAAAACTGTCTGTAGGCGCACGATaGGTCGTGCTGGGAGCCAGGCCTATCGGCGGGGTCCAGAAGCTG +
Preference number: 5 (lower is better)
Translates to: IAERAAVRKLSVGAR*VVLGARPIGGVQKL
Trigger: CAGCTTCTGGACCCCGCCGATAGGCCTGGCTCCCAGCACGACGCATCGTGCGCCTACAGACAGTTTTCGGACCGCAGCTCTCTCTGCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262901.4
ENST00000369208.8
ENST00000505753.1
CDS GCA 90 bp CCACCAGCCTCGAGTGGTCAAGCGCAAAGCCATAGCAGAGAGAGCTaGGGTCCGAAAACTGTCTGTAGGCGCACGATGCGTCGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: PPASSGQAQSHSRES*GPKTVCRRTMRRAG
Trigger: CCCAGCACGACGCATCGTGCGCCTACAGACAGTTTTCGGACCGCAGCTCTCTCTGCTATGGCTTTGCGCTTGACCACTCGAGGCTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262901.4
ENST00000369208.8
ENST00000505753.1
CDS CCA 90 bp CCCAGGAAGTACCTGCCTGCCTCACATCGGCCTCCTTCACAGGCCTaGGTATGGAAATGCCTCTCTTCCACCAGCCTCGAGTGGTCAAGC +
Preference number: 5 (lower is better)
Translates to: PRKYLPASHRPPSQA*VWKCLSSTSLEWSS
Trigger: GCTTGACCACTCGAGGCTGGTGGAAGAGAGGCATTTCCATACCCAGGCCTGTGAAGGAGGCCGATGTGAGGCAGGCAGGTACTTCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262901.4
ENST00000369208.8
ENST00000505753.1
CDS-3UTR CAA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAAGGGGGCTGGTCCGACTaGAGTGGCCCCACGCCTCGC +
Preference number: 5 (lower is better)
Translates to: QFCSITEHERWGCLTNQEGGWSD*SGPTPR
Trigger: GCGAGGCGTGGGGCCACTCAAGTCGGACCAGCCCCC...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CCA 90 bp AGCTGGAGAGCCGGGATTTGGCCCCCTTTCTGTTGTCAGTCATGGTaGGGGTGGAGCTGCTGGTATAGGAGAAGGCTGGTTTGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: SWRAGIWPPFCCQSW*GWSCWYRRRLVWRL
Trigger: CAGCCTCCAAACCAGCCTTCTCCTATACCAGCAGCTCCACCCCCACCATGACTGACAACAGAAAGGGGGCCAAATCCCGGCTCTCCAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp AACATGAACGCTGGGGCTGCCTTACAAACCAGGAAACTAGAGCCCAGGCACGGTAGTTCTCGGCCAACGTaGTCCAGGGGGCTGGTCCGA +
Preference number: 5 (lower is better)
Translates to: NMNAGAALQTRKLEPRHGSSRPT*SRGLVR
Trigger: TCGGACCAGCCCCCTGGACAACGTTGGCCGAGAACT...ACCGTGCCTGGGCTCTAGTTTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS TCA 90 bp CCGGCAGAGAGGAGCAGAGCATTCCCGGCTCCCTTTTCTGGATCATaGATTGGAGGAGGGGTGCGTGGCAGAAAGAGGAGGATGCAAGCT +
Preference number: 5 (lower is better)
Translates to: PAERSRAFPAPFSGS*IGGGVRGRKRRMQA
Trigger: AGCTTGCATCCTCCTCTTTCTGCCACGCACCCCTCCTCCAATTCATGATCCAGAAAAGGGAGCCGGGAATGCTCTGCTCCTCTCTGCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS TCA 90 bp GCAATCCTGAGGGTCGTTCAGGGTATCAAATGCCAGTGGGACCCCTaGGGAGCCAGCCTTTTCTTCTACTGCCAGCTGCGAACCCTGGTC +
Preference number: 5 (lower is better)
Translates to: AILRVVQGIKCQWDP*GASLFFYCQLRTLV
Trigger: GACCAGGGTTCGCAGCTGGCAGTAGAAGAAAAGGCTGGCTCCTCAGGGGTCCCACTGGCATTTGATACCCTGAACGACCCTCAGGATTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS CCA 90 bp TTGAGCTGGAGAGCCGGGATTTGGCCCCCTTTCTGTTGTCAGTCATaGTGGGGGTGGAGCTGCTGGTATAGGAGAAGGCTGGTTTGGAGG +
Preference number: 5 (lower is better)
Translates to: LSWRAGIWPPFCCQS*WGWSCWYRRRLVWR
Trigger: CCTCCAAACCAGCCTTCTCCTATACCAGCAGCTCCACCCCCACCATGACTGACAACAGAAAGGGGGCCAAATCCCGGCTCTCCAGCTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CCA 90 bp CTTCCCACCGGCAGAGAGGAGCAGAGCATTCCCGGCTCCCTTTTCTaGATCATGAATTGGAGGAGGGGTGCGTGGCAGAAAGAGGAGGAT +
Preference number: 5 (lower is better)
Translates to: LPTGREEQSIPGSLF*IMNWRRGAWQKEED
Trigger: ATCCTCCTCTTTCTGCCACGCACCCCTCCTCCAATTCATGATCCAGAAAAGGGAGCCGGGAATGCTCTGCTCCTCTCTGCCGGTGGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS-3UTR CAA 90 bp AACATGAACGCTGGGGCTGCCTTACAAACCAGGAAACTAGAGCCCAGGCACGGTGGCAGACTTCACCTGTaGGTGGGGGCTGTTGGTAGT +
Preference number: 5 (lower is better)
Translates to: NMNAGAALQTRKLEPRHGGRLHL*VGAVGS
Trigger: ACTACCAACAGCCCCCACCAACAGGTGAAGTCTGCC...ACCGTGCCTGGGCTCTAGTTTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CCA 90 bp AGAGAGGAGCAGAGCATTCCCGGCTCCCTTTTCTGGATCATGAATTaGAGGAGGGGTGCGTGGCAGAAAGAGGAGGATGCAAGCTTTGGG +
Preference number: 5 (lower is better)
Translates to: REEQSIPGSLFWIMN*RRGAWQKEEDASFG
Trigger: CCCAAAGCTTGCATCCTCCTCTTTCTGCCACGCACCCCTCCTCCAATTCATGATCCAGAAAAGGGAGCCGGGAATGCTCTGCTCCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS-3UTR CAA 90 bp GTTCAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGTGAGAGTGGTAGGGTaGATGGGCGGTGAGCACCGC +
Preference number: 5 (lower is better)
Translates to: VQFCSITEHERWGCLTNQVRVVG*MGGEHR
Trigger: GCGGTGCTCACCGCCCATCAACCCTACCACTCTCAC...CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS TCA 90 bp GATATCGGTCACCTGATTCACTGGCCGACCCAGGGTCTGGAGAACTaGCCACACTATCTTCATCCCAATGACCTCGCCCATGGATCCTGT +
Preference number: 5 (lower is better)
Translates to: DIGHLIHWPTQGLEN*PHYLHPNDLAHGSC
Trigger: ACAGGATCCATGGGCGAGGTCATTGGGATGAAGATAGTGTGGTCAGTTCTCCAGACCCTGGGTCGGCCAGTGAATCAGGTGACCGATATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS TCA 90 bp GAGGGGTGCGTGGCAGAAAGAGGAGGATGCAAGCTTTGGGACGAGTaGGGTGATTTTAGAATCCTGGTCCTCCGTAGTTGCTACGAAGCC +
Preference number: 5 (lower is better)
Translates to: EGCVAERGGCKLWDE*GDFRILVLRSCYEA
Trigger: GGCTTCGTAGCAACTACGGAGGACCAGGATTCTAAAATCACCTCACTCGTCCCAAAGCTTGCATCCTCCTCTTTCTGCCACGCACCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS CCA 90 bp ATTCCCGGCTCCCTTTTCTGGATCATGAATTGGAGGAGGGGTGCGTaGCAGAAAGAGGAGGATGCAAGCTTTGGGACGAGTGAGGTGATT +
Preference number: 5 (lower is better)
Translates to: IPGSLFWIMNWRRGA*QKEEDASFGTSEVI
Trigger: AATCACCTCACTCGTCCCAAAGCTTGCATCCTCCTCTTTCTGCCACGCACCCCTCCTCCAATTCATGATCCAGAAAAGGGAGCCGGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS-3UTR CAA 90 bp TTATTTCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTGAGGGGGGCTGGTCCGACTaGAGTGGCCCCACGCCTCGC +
Preference number: 5 (lower is better)
Translates to: LFHSASGLSIFIELLPIEGGWSD*SGPTPR
Trigger: GCGAGGCGTGGGGCCACTCAAGTCGGACCAGCCCCC...CTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGAAATAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAATTGGCCCCCTTTCTGTaGTCAGTCATGGTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: QFCSITEHERWGCLTNQELAPFL*SVMVGV
Trigger: CACCCCCACCATGACTGACAACAGAAAGGGGGCCAA...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp AACATGAACGCTGGGGCTGCCTTACAAACCAGGAAACTAGAGCCCAGGCACGGTTCCTGGATTTTGACTTaGAGCTGGAGAGCCGGGATT +
Preference number: 5 (lower is better)
Translates to: NMNAGAALQTRKLEPRHGSWILT*SWRAGI
Trigger: AATCCCGGCTCTCCAGCTCAAAGTCAAAATCCAGGA...ACCGTGCCTGGGCTCTAGTTTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS TCA 90 bp GGGGCTCAACATTTTTCCCTCTCTCTGCTGGATATGGTCACATGGTaGAGTGTTGGCAAGAGCAGAGCCATGGCAGACTTCACCTGTTGG +
Preference number: 5 (lower is better)
Translates to: GAQHFSLSLLDMVTW*SVGKSRAMADFTCW
Trigger: CCAACAGGTGAAGTCTGCCATGGCTCTGCTCTTGCCAACACTTCACCATGTGACCATATCCAGCAGAGAGAGGGAAAAATGTTGAGCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS TCA 90 bp GCCAGCTGCGAACCCTGGTCCTCGGAAAATCGACATAATAATCCCTaGCGTTTGCTCTTCAGTCTCGCGGCATTTAAGGTATCTCCGAGC +
Preference number: 5 (lower is better)
Translates to: ASCEPWSSENRHNNP*RLLFSLAAFKVSPS
Trigger: GCTCGGAGATACCTTAAATGCCGCGAGACTGAAGAGCAAACGTCAGGGATTATTATGTCGATTTTCCGAGGACCAGGGTTCGCAGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS GCA 90 bp AATGACCTCGCCCATGGATCCTGTGGACTGAAGCGATGTGAGGCATaGTGTTTTCATAGGCTTCTCTGCTTTCTGGGGAGGCCTTTGTCA +
Preference number: 5 (lower is better)
Translates to: NDLAHGSCGLKRCEA*CFHRLLCFLGRPLS
Trigger: TGACAAAGGCCTCCCCAGAAAGCAGAGAAGCCTATGAAAACAGCATGCCTCACATCGCTTCAGTCCACAGGATCCATGGGCGAGGTCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CCA 90 bp ACATTTTTCCCTCTCTCTGCTGGATATGGTCACATGGTGAAGTGTTaGCAAGAGCAGAGCCATGGCAGACTTCACCTGTTGGTGGGGGCT +
Preference number: 5 (lower is better)
Translates to: TFFPLSAGYGHMVKC*QEQSHGRLHLLVGA
Trigger: AGCCCCCACCAACAGGTGAAGTCTGCCATGGCTCTGCTCTTGCCAACACTTCACCATGTGACCATATCCAGCAGAGAGAGGGAAAAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAAGTGAGAGTGGTAGGGTaGATGGGCGGTGAGCACCGC +
Preference number: 5 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQVRVVG*MGGEHR
Trigger: GCGGTGCTCACCGCCCATCAACCCTACCACTCTCAC...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACCACCAGGCCCACGTTTaGGTAGCAGCCGTCGAAGGG +
Preference number: 5 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHHQAHV*VAAVEG
Trigger: CCCTTCGACGGCTGCTACCAAAACGTGGGCCTGGTG...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp AACATGAACGCTGGGGCTGCCTTACAAACCAGGAAACTAGAGCCCAGGCACGGTATAACAGATGTTCCCTaGTGTCCTTGTGCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: NMNAGAALQTRKLEPRHGITDVP*CPCAGS
Trigger: AGACCCAGCACAAGGACACAAGGGAACATCTGTTAT...ACCGTGCCTGGGCTCTAGTTTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS TCA 90 bp TTCATGTGGGCTACTTTGATACTGCTCAGTACGATATCGGTCACCTaGTTCACTGGCCGACCCAGGGTCTGGAGAACTGACCACACTATC +
Preference number: 5 (lower is better)
Translates to: FMWATLILLSTISVT*FTGRPRVWRTDHTI
Trigger: GATAGTGTGGTCAGTTCTCCAGACCCTGGGTCGGCCAGTGAATCAGGTGACCGATATCGTACTGAGCAGTATCAAAGTAGCCCACATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS GCA 90 bp GCGAACCCTGGTCCTCGGAAAATCGACATAATAATCCCTGACGTTTaGTCTTCAGTCTCGCGGCATTTAAGGTATCTCCGAGCCCCTTTG +
Preference number: 5 (lower is better)
Translates to: ANPGPRKIDIIIPDV*SSVSRHLRYLRAPL
Trigger: CAAAGGGGCTCGGAGATACCTTAAATGCCGCGAGACTGAAGAGCAAACGTCAGGGATTATTATGTCGATTTTCCGAGGACCAGGGTTCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS CCA 90 bp ATAGGAAAGTTGCTGATCCACCGAATTTGGGCGATCCACCGAATTTaGGCAATCCTGAGGGTCGTTCAGGGTATCAAATGCCAGTGGGAC +
Preference number: 5 (lower is better)
Translates to: IGKLLIHRIWAIHRI*AILRVVQGIKCQWD
Trigger: GTCCCACTGGCATTTGATACCCTGAACGACCCTCAGGATTGCCCAAATTCGGTGGATCGCCCAAATTCGGTGGATCAGCAACTTTCCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS-3UTR CAA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAAATATTGCTGTGTAGCTaGATCTCCGTGACGGCGCTG +
Preference number: 5 (lower is better)
Translates to: QFCSITEHERWGCLTNQEILLCS*ISVTAL
Trigger: CAGCGCCGTCACGGAGATCAAGCTACACAGCAATAT...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp GTTCAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGTCACATGGTGAAGTGTaGGCAAGAGCAGAGCCATGG +
Preference number: 5 (lower is better)
Translates to: VQFCSITEHERWGCLTNQSHGEV*ARAEPW
Trigger: CCATGGCTCTGCTCTTGCCAACACTTCACCATGTGA...CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp GTTCAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGTTGTGCTGGGTCTGGTaGCATCCTCAGATGGGAAGT +
Preference number: 5 (lower is better)
Translates to: VQFCSITEHERWGCLTNQLCWVW*HPQMGS
Trigger: ACTTCCCATCTGAGGATGCAACCAGACCCAGCACAA...CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS GCA 90 bp CCGGTGAGAGCCAAAGCAGTTTGGAGAGACAGTAGGGTGGTCTCCTaGTGTCTGATGAGGAGATATATCCGAATGCAGATAGTCTTTAGC +
Preference number: 5 (lower is better)
Translates to: PVRAKAVWRDSRVVS*CLMRRYIRMQIVFS
Trigger: GCTAAAGACTATCTGCATTCGGATATATCTCCTCATCAGACAGCAGGAGACCACCCTACTGTCTCTCCAAACTGCTTTGGCTCTCACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CCA 90 bp GAAAATTCGGGATGCAGTATAGGAAAGTTGCTGATCCACCGAATTTaGGCGATCCACCGAATTTGGGCAATCCTGAGGGTCGTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: ENSGCSIGKLLIHRI*AIHRIWAILRVVQG
Trigger: ACCCTGAACGACCCTCAGGATTGCCCAAATTCGGTGGATCGCCCAAATTCGGTGGATCAGCAACTTTCCTATACTGCATCCCGAATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS-3UTR CAA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAACTGGAGAGCCGGGATTaGGCCCCCTTTCTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQLESRD*APFLLS
Trigger: TGACAACAGAAAGGGGGCCAAATCCCGGCTCTCCAG...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp AACATGAACGCTGGGGCTGCCTTACAAACCAGGAAACTAGAGCCCAGGCACGGTTTCATGTGGGCTACTTaGATACTGCTCAGTACGATA +
Preference number: 5 (lower is better)
Translates to: NMNAGAALQTRKLEPRHGFMWAT*ILLSTI
Trigger: TATCGTACTGAGCAGTATCAAAGTAGCCCACATGAA...ACCGTGCCTGGGCTCTAGTTTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp GTTCAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGGGGCTGTTGGTAGTTaGCAAAACACAGGGAGTGTT +
Preference number: 5 (lower is better)
Translates to: VQFCSITEHERWGCLTNQGAVGS*QNTGSV
Trigger: AACACTCCCTGTGTTTTGCAAACTACCAACAGCCCC...CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAAGGGGCTGTTGGTAGTTaGCAAAACACAGGGAGTGTT +
Preference number: 5 (lower is better)
Translates to: QFCSITEHERWGCLTNQEGAVGS*QNTGSV
Trigger: AACACTCCCTGTGTTTTGCAAACTACCAACAGCCCC...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp CTGTGGCGCTCACTTATACAAAACATCGCCCTCTGTATACTCAGGTTTCACATTGGCAGACTTCACCTGTaGGTGGGGGCTGTTGGTAGT +
Preference number: 5 (lower is better)
Translates to: LWRSLIQNIALCILRFHIGRLHL*VGAVGS
Trigger: ACTACCAACAGCCCCCACCAACAGGTGAAGTCTGCC...AATGTGAAACCTGAGTATACAGAGGGCGATGTTTTGTATAAGTGAGCGCCACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CAA 90 bp CTGTGGCGCTCACTTATACAAAACATCGCCCTCTGTATACTCAGGTTTCACATTGGCGATCCACCGAATTaGGGCAATCCTGAGGGTCGT +
Preference number: 5 (lower is better)
Translates to: LWRSLIQNIALCILRFHIGDPPN*GNPEGR
Trigger: ACGACCCTCAGGATTGCCCAAATTCGGTGGATCGCC...AATGTGAAACCTGAGTATACAGAGGGCGATGTTTTGTATAAGTGAGCGCCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CAA 90 bp GTTCAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGAATATGGCAAGAGTTTaGGGCACGGGACTCCTAGGA +
Preference number: 5 (lower is better)
Translates to: VQFCSITEHERWGCLTNQNMARV*GTGLLG
Trigger: TCCTAGGAGTCCCGTGCCCAAAACTCTTGCCATATT...CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS CCA 90 bp GTAAGCATGCTTGTCAAAATACTGCCGGTGAGAGCCAAAGCAGTTTaGAGAGACAGTAGGGTGGTCTCCTGCTGTCTGATGAGGAGATAT +
Preference number: 5 (lower is better)
Translates to: VSMLVKILPVRAKAV*RDSRVVSCCLMRRY
Trigger: ATATCTCCTCATCAGACAGCAGGAGACCACCCTACTGTCTCTCCAAACTGCTTTGGCTCTCACCGGCAGTATTTTGACAAGCATGCTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp GTTCAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGTCCGCGCAGCATTTTaGGACTTTTCTTTCATTGTG +
Preference number: 5 (lower is better)
Translates to: VQFCSITEHERWGCLTNQVRAAF*DFSFIV
Trigger: CACAATGAAAGAAAAGTCCAAAAATGCTGCGCGGAC...CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp CCAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCAGTTCTCGGCCAACGTaGTCCAGGGGGCTGGTCCGA +
Preference number: 5 (lower is better)
Translates to: PGENSFLHHIQNHFSNLCSSRPT*SRGLVR
Trigger: TCGGACCAGCCCCCTGGACAACGTTGGCCGAGAACT...GCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp TCACAATGCAATGTTGTCATTCATCAGTCCTCTCATGTAGTATATATGCACACTCACCAGGCCCACGTTTaGGTAGCAGCCGTCGAAGGG +
Preference number: 5 (lower is better)
Translates to: SQCNVVIHQSSHVVYMHTHQAHV*VAAVEG
Trigger: CCCTTCGACGGCTGCTACCAAAACGTGGGCCTGGTG...AGTGTGCATATATACTACATGAGAGGACTGATGAATGACAACATTGCATTGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACATATTGCTGTGTAGCTaGATCTCCGTGACGGCGCTG +
Preference number: 5 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHILLCS*ISVTAL
Trigger: CAGCGCCGTCACGGAGATCAAGCTACACAGCAATAT...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACGGGAAGTCCTGGATTTaGACTTTGAGCTGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHGKSWI*TLSWRA
Trigger: GGCTCTCCAGCTCAAAGTCAAAATCCAGGACTTCCC...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp AACATGAACGCTGGGGCTGCCTTACAAACCAGGAAACTAGAGCCCAGGCACGGTTTAGCTCTTAACTACTaGTCTATCAGCCTAAGCTTT +
Preference number: 5 (lower is better)
Translates to: NMNAGAALQTRKLEPRHGLALNY*SISLSF
Trigger: AAAGCTTAGGCTGATAGACAAGTAGTTAAGAGCTAA...ACCGTGCCTGGGCTCTAGTTTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACGCTGATCCACCGAATTaGGGCGATCCACCGAATTTG +
Preference number: 5 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHADPPN*GDPPNL
Trigger: CAAATTCGGTGGATCGCCCAAATTCGGTGGATCAGC...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CAA 90 bp GTTCAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGTGCAGTATAGGAAAGTaGCTGATCCACCGAATTTGG +
Preference number: 5 (lower is better)
Translates to: VQFCSITEHERWGCLTNQCSIGK*LIHRIW
Trigger: CCAAATTCGGTGGATCAGCAACTTTCCTATACTGCA...CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS TCA 90 bp TGCTGGGTCTGGTTGCATCCTCAGATGGGAAGTTACATCAAAGTGTaGGCCATTACAGCCCAAGGAATAGTTTCTAATGGTTTCGCTGTC +
Preference number: 5 (lower is better)
Translates to: CWVWLHPQMGSYIKV*AITAQGIVSNGFAV
Trigger: GACAGCGAAACCATTAGAAACTATTCCTTGGGCTGTAATGGCTCACACTTTGATGTAACTTCCCATCTGAGGATGCAACCAGACCCAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS GCA 90 bp TATGTAAATATGTATGCATTTCTCTGGTCACTGATGTCGGCTCATTaGCTGGCAAATCCCCGGCCCCTTCTGCCTTTGAAATTCCATCTG +
Preference number: 5 (lower is better)
Translates to: YVNMYAFLWSLMSAH*LANPRPLLPLKFHL
Trigger: CAGATGGAATTTCAAAGGCAGAAGGGGCCGGGGATTTGCCAGGCAATGAGCCGACATCAGTGACCAGAGAAATGCATACATATTTACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511871.1
CDS-3UTR CAA 90 bp CAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGGAATGGACTTTTCTTTCATaGTGTCTTGTTCCCCCTTTC +
Preference number: 5 (lower is better)
Translates to: QFCSITEHERWGCLTNQEWTFLS*CLVPPF
Trigger: GAAAGGGGGAACAAGACACAATGAAAGAAAAGTCCA...TTCCTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGAGGCCGGCGTTACGCTaGGCCAAGACGCACTTCATC +
Preference number: 5 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLRPALR*AKTHFI
Trigger: GATGAAGTGCGTCTTGGCCAAGCGTAACGCCGGCCT...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACTGTTGGTGGGGGCTGTaGGTAGTTTGCAAAACACAG +
Preference number: 5 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHCWWGL*VVCKTQ
Trigger: CTGTGTTTTGCAAACTACCAACAGCCCCCACCAACA...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAAGCATCCCGTCTCATTTaGAATGTCACCTCAGCACTG +
Preference number: 5 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQASRLI*NVTSAL
Trigger: CAGTGCTGAGGTGACATTCAAAATGAGACGGGATGC...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS TCA 90 bp GCTCTTATAAGAGTTTCAATTTTGCTGGGTTCATGTGGGCTACTTTaGTACTGCTCAGTACGATATCGGTCACCTGATTCACTGGCCGAC +
Preference number: 5 (lower is better)
Translates to: ALIRVSILLGSCGLL*YCSVRYRSPDSLAD
Trigger: GTCGGCCAGTGAATCAGGTGACCGATATCGTACTGAGCAGTATCAAAGTAGCCCACATGAACCCAGCAAAATTGAAACTCTTATAAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS GCA 90 bp TCAGCTTCCGTTGGTTATTATAACAGATGTTCCCTTGTGTCCTTGTaGTGGGTCTGGTTGCATCCTCAGATGGGAAGTTACATCAAAGTG +
Preference number: 5 (lower is better)
Translates to: SASVGYYNRCSLVSL*WVWLHPQMGSYIKV
Trigger: CACTTTGATGTAACTTCCCATCTGAGGATGCAACCAGACCCAGCACAAGGACACAAGGGAACATCTGTTATAATAACCAACGGAAGCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGTTGGCCCCCTTTCTGTaGTCAGTCATGGTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLLAPFL*SVMVGV
Trigger: CACCCCCACCATGACTGACAACAGAAAGGGGGCCAA...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp CAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCCTGGAGAGCCGGGATTaGGCCCCCTTTCTGTTGTCA +
Preference number: 5 (lower is better)
Translates to: QVKTHFCTISRTISLIYALESRD*APFLLS
Trigger: TGACAACAGAAAGGGGGCCAAATCCCGGCTCTCCAG...GGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS GCA 90 bp GTTATTATAACAGATGTTCCCTTGTGTCCTTGTGCTGGGTCTGGTTaGATCCTCAGATGGGAAGTTACATCAAAGTGTGAGCCATTACAG +
Preference number: 5 (lower is better)
Translates to: VIITDVPLCPCAGSG*ILRWEVTSKCEPLQ
Trigger: CTGTAATGGCTCACACTTTGATGTAACTTCCCATCTGAGGATGCAACCAGACCCAGCACAAGGACACAAGGGAACATCTGTTATAATAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACGAAATGCGATCCGAATaGGGACTACTTATCCGAGAT +
Preference number: 5 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHEMRSE*GLLIRD
Trigger: ATCTCGGATAAGTAGTCCCAATTCGGATCGCATTTC...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp TTATTTCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTGAGTGTTCCCTTGTGTCCTaGTGCTGGGTCTGGTTGCAT +
Preference number: 5 (lower is better)
Translates to: LFHSASGLSIFIELLPIECSLVS*CWVWLH
Trigger: ATGCAACCAGACCCAGCACAAGGACACAAGGGAACA...CTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGAAATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp GTTCAGTTCTGCTCTATCACAGAACATGAACGCTGGGGCTGCCTTACAAACCAGATTGCAAGACGGTATTaGAAATATTGGCGATCAGTA +
Preference number: 5 (lower is better)
Translates to: VQFCSITEHERWGCLTNQIARRY*KYWRSV
Trigger: TACTGATCGCCAATATTTCAAATACCGTCTTGCAAT...CTGGTTTGTAAGGCAGCCCCAGCGTTCATGTTCTGTGATAGAGCAGAACTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CAA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACCGGAACATAAACATATaGCTGTGTAGCTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHRNINI*LCSLIS
Trigger: GGAGATCAAGCTACACAGCAATATGTTTATGTTCCG...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACTTCATGTGGGCTACTTaGATACTGCTCAGTACGATA +
Preference number: 5 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHFMWAT*ILLSTI
Trigger: TATCGTACTGAGCAGTATCAAAGTAGCCCACATGAA...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGTCACATGGTGAAGTGTaGGCAAGAGCAGAGCCATGG +
Preference number: 5 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLSHGEV*ARAEPW
Trigger: CCATGGCTCTGCTCTTGCCAACACTTCACCATGTGA...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp CCAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCTTGTGCTGGGTCTGGTaGCATCCTCAGATGGGAAGT +
Preference number: 5 (lower is better)
Translates to: PGENSFLHHIQNHFSNLCLCWVW*HPQMGS
Trigger: ACTTCCCATCTGAGGATGCAACCAGACCCAGCACAA...GCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp CAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGTTCCCTTGTGTCCTaGTGCTGGGTCTGGTTGCAT +
Preference number: 5 (lower is better)
Translates to: QVKTHFCTISRTISLIYACSLVS*CWVWLH
Trigger: ATGCAACCAGACCCAGCACAAGGACACAAGGGAACA...GGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp AGCTTTTATCTTAGACTCTCTCCTGAGGCTTTCCACATGTTGTCACATTGGCACAATGAGCTGGCTGATTaGAAACCACAAAGAAGTCAG +
Preference number: 5 (lower is better)
Translates to: SFYLRLSPEAFHMLSHWHNELAD*KPQRSQ
Trigger: CTGACTTCTTTGTGGTTTCAAATCAGCCAGCTCATT...GTGCCAATGTGACAACATGTGGAAAGCCTCAGGAGAGAGTCTAAGATAAAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp CCAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCTTTCTGGATCATGAATaGGAGGAGGGGTGCGTGGCA +
Preference number: 5 (lower is better)
Translates to: PGENSFLHHIQNHFSNLCFLDHE*EEGCVA
Trigger: TGCCACGCACCCCTCCTCCAATTCATGATCCAGAAA...GCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CAA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGTCCTGGATTTTGACTTaGAGCTGGAGAGCCGGGATT +
Preference number: 5 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLSWILT*SWRAGI
Trigger: AATCCCGGCTCTCCAGCTCAAAGTCAAAATCCAGGA...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp TCAAATGTGTATTCAGAAGATTTCTTTATCTGTGCTGCCATCCATCAAACTTACGGGAAGTCCTGGATTTaGACTTTGAGCTGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: SNVYSEDFFICAAIHQTYGKSWI*TLSWRA
Trigger: GGCTCTCCAGCTCAAAGTCAAAATCCAGGACTTCCC...GTAAGTTTGATGGATGGCAGCACAGATAAAGAAATCTTCTGAATACACATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CAA 90 bp CCCAATATCTCAGTGTTCTTACTTAGAAAAACCCTCAGCGCCATGTCAGTGCAAATAAGAGTTTCAATTTaGCTGGGTTCATGTGGGCTA +
Preference number: 5 (lower is better)
Translates to: PNISVFLLRKTLSAMSVQIRVSI*LGSCGL
Trigger: TAGCCCACATGAACCCAGCAAAATTGAAACTCTTAT...TTGCACTGACATGGCGCTGAGGGTTTTTCTAAGTAAGAACACTGAGATATTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp CTGTGGCGCTCACTTATACAAAACATCGCCCTCTGTATACTCAGGTTTCACATTATAAGAGTTTCAATTTaGCTGGGTTCATGTGGGCTA +
Preference number: 5 (lower is better)
Translates to: LWRSLIQNIALCILRFHIIRVSI*LGSCGL
Trigger: TAGCCCACATGAACCCAGCAAAATTGAAACTCTTAT...AATGTGAAACCTGAGTATACAGAGGGCGATGTTTTGTATAAGTGAGCGCCACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CAA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGTGTTGGTGGGGGCTGTaGGTAGTTTGCAAAACACAG +
Preference number: 5 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLCWWGL*VVCKTQ
Trigger: CTGTGTTTTGCAAACTACCAACAGCCCCCACCAACA...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGGGTATAAACAGGGAGTaGGTTCCAGGATTACCCCCA +
Preference number: 5 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLGINRE*VPGLPP
Trigger: TGGGGGTAATCCTGGAACCAACTCCCTGTTTATACC...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CAA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGATAACAGATGTTCCCTaGTGTCCTTGTGCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLITDVP*CPCAGS
Trigger: AGACCCAGCACAAGGACACAAGGGAACATCTGTTAT...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp TCACAATGCAATGTTGTCATTCATCAGTCCTCTCATGTAGTATATATGCACACTCTGTCCCTGGCACATTaGGTAGAATATATAGCCACC +
Preference number: 5 (lower is better)
Translates to: SQCNVVIHQSSHVVYMHTLSLAH*VEYIAT
Trigger: GGTGGCTATATATTCTACCAAATGTGCCAGGGACAG...AGTGTGCATATATACTACATGAGAGGACTGATGAATGACAACATTGCATTGTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS TCA 90 bp AAAGTCATGTTTGGATTAGTAGTACTTTCAATTGAGCCTAGTATCTaGAGTGTTGACAAAAGGACTGTTGGGCTGCTTCCCAACCAAACA +
Preference number: 5 (lower is better)
Translates to: KVMFGLVVLSIEPSI*SVDKRTVGLLPNQT
Trigger: TGTTTGGTTGGGAAGCAGCCCAACAGTCCTTTTGTCAACACTTCAGATACTAGGCTCAATTGAAAGTACTACTAATCCAAACATGACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511871.1
CDS-3UTR CAA 90 bp TTATTTCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTGAGTGGACTTTTCTTTCATaGTGTCTTGTTCCCCCTTTC +
Preference number: 5 (lower is better)
Translates to: LFHSASGLSIFIELLPIEWTFLS*CLVPPF
Trigger: GAAAGGGGGAACAAGACACAATGAAAGAAAAGTCCA...CTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGAAATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp TCACAATGCAATGTTGTCATTCATCAGTCCTCTCATGTAGTATATATGCACACTGGATCAAACTGGATTTaGAAATGCGATCCGAATTGG +
Preference number: 5 (lower is better)
Translates to: SQCNVVIHQSSHVVYMHTGSNWI*KCDPNW
Trigger: CCAATTCGGATCGCATTTCAAAATCCAGTTTGATCC...AGTGTGCATATATACTACATGAGAGGACTGATGAATGACAACATTGCATTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp CCAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCAATGAGCTGGCTGATTaGAAACCACAAAGAAGTCAG +
Preference number: 5 (lower is better)
Translates to: PGENSFLHHIQNHFSNLCNELAD*KPQRSQ
Trigger: CTGACTTCTTTGTGGTTTCAAATCAGCCAGCTCATT...GCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp TTATTTCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTGAGGGTGAAAACTCATTTTaGCACCATATCCAGAACCAT +
Preference number: 5 (lower is better)
Translates to: LFHSASGLSIFIELLPIEGENSF*HHIQNH
Trigger: ATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC...CTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGAAGAGGCTGAAGTATTaGCACCAAGAACAGTGTATT +
Preference number: 5 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLKRLKY*HQEQCI
Trigger: AATACACTGTTCTTGGTGCAAATACTTCAGCCTCTT...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp TCAAATGTGTATTCAGAAGATTTCTTTATCTGTGCTGCCATCCATCAAACTTACCGGAACATAAACATATaGCTGTGTAGCTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: SNVYSEDFFICAAIHQTYRNINI*LCSLIS
Trigger: GGAGATCAAGCTACACAGCAATATGTTTATGTTCCG...GTAAGTTTGATGGATGGCAGCACAGATAAAGAAATCTTCTGAATACACATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CAA 90 bp CCAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCGGTGAAAACTCATTTTaGCACCATATCCAGAACCAT +
Preference number: 5 (lower is better)
Translates to: PGENSFLHHIQNHFSNLCGENSF*HHIQNH
Trigger: ATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC...GCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp TTATTTCACTCTGCCTCTGGCCTTTCCATATTCATAGAACTACTTCCAATTGAGTTAGCTCTTAACTACTaGTCTATCAGCCTAAGCTTT +
Preference number: 5 (lower is better)
Translates to: LFHSASGLSIFIELLPIELALNY*SISLSF
Trigger: AAAGCTTAGGCTGATAGACAAGTAGTTAAGAGCTAA...CTCAATTGGAAGTAGTTCTATGAATATGGAAAGGCCAGAGGCAGAGTGAAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS-3UTR CAA 90 bp GGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCTGATATTATCGTTCAGATaGTCACCTACCTATGGACTG +
Preference number: 5 (lower is better)
Translates to: GENSFLHHIQNHFSNLCLILSFR*SPTYGL
Trigger: CAGTCCATAGGTAGGTGACAATCTGAACGATAATAT...CAGGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CAA 90 bp TCAAATGTGTATTCAGAAGATTTCTTTATCTGTGCTGCCATCCATCAAACTTACAATATGACAAAAGACTaGTGGACCGAAGCACACCTA +
Preference number: 5 (lower is better)
Translates to: SNVYSEDFFICAAIHQTYNMTKD*WTEAHL
Trigger: TAGGTGTGCTTCGGTCCACAAGTCTTTTGTCATATT...GTAAGTTTGATGGATGGCAGCACAGATAAAGAAATCTTCTGAATACACATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CAA 90 bp CAGGTGAAAACTCATTTTTGCACCATATCCAGAACCATTTCTCTAATTTATGCCGTCAACATCTATGATTaGAGTGAACTAGGGAACCAA +
Preference number: 5 (lower is better)
Translates to: QVKTHFCTISRTISLIYAVNIYD*SELGNQ
Trigger: TTGGTTCCCTAGTTCACTCAAATCATAGATGTTGAC...GGCATAAATTAGAGAAATGGTTCTGGATATGGTGCAAAAATGAGTTTTCACCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS-3UTR CAA 90 bp TCAAATGTGTATTCAGAAGATTTCTTTATCTGTGCTGCCATCCATCAAACTTACAAGAGGCTGAAGTATTaGCACCAAGAACAGTGTATT +
Preference number: 5 (lower is better)
Translates to: SNVYSEDFFICAAIHQTYKRLKY*HQEQCI
Trigger: AATACACTGTTCTTGGTGCAAATACTTCAGCCTCTT...GTAAGTTTGATGGATGGCAGCACAGATAAAGAAATCTTCTGAATACACATTTGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369208.8
CDS CCA 72 bp GGGAGCCCAGTTCTCGGCCAACGTTGTCCAGGGGGCTaGTCCGACTTGAGTGGCCCCACGCCTCGCCGAGCC +
Preference number: 6 (lower is better)
Translates to: GSPVLGQRCPGG*SDLSGPTPRRA
Trigger: GGCTCGGCGAGGCGTGGGGCCACTCAAGTCGGACCAGCCCCCTGGACAACGTTGGCCGAGAACTGGGCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS GCA 72 bp TGCTGGGAGCCAGGCCTATCGGCGGGGTCCAGAAGCTaGGGAGAGGCCGTGTCGGTCAAGGGACTTCCGCCC +
Preference number: 6 (lower is better)
Translates to: CWEPGLSAGSRS*GEAVSVKGLPP
Trigger: GGGCGGAAGTCCCTTGACCGACACGGCCTCTCCGCAGCTTCTGGACCCCGCCGATAGGCCTGGCTCCCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262901.4
ENST00000369208.8
ENST00000505753.1
CDS GCA 72 bp GCTCCCTCCCGGCCTGCGGCGTTCCCAGGAAGTACCTaGCTGCCTCACATCGGCCTCCTTCACAGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: APSRPAAFPGST*LPHIGLLHRPG
Trigger: CCCAGGCCTGTGAAGGAGGCCGATGTGAGGCAGGCAGGTACTTCCTGGGAACGCCGCAGGCCGGGAGGGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262901.4
ENST00000369208.8
ENST00000505753.1
CDS CCA 72 bp CGGCCAACGTTGTCCAGGGGGCTGGTCCGACTTGAGTaGCCCCACGCCTCGCCGAGCCCTTCTGGGAACACC +
Preference number: 6 (lower is better)
Translates to: RPTLSRGLVRLE*PHASPSPSGNT
Trigger: GGTGTTCCCAGAAGGGCTCGGCGAGGCGTGGGGCCACTCAAGTCGGACCAGCCCCCTGGACAACGTTGGCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CAA 90 bp GGGAGCCCAGTTCTCGGCCAACGTTGTCCAGGGGGCTGGTCCGACTaGAGTGGCCCCACGCCTCGCCGAGCCCTTCTGGGAACACCACTC +
Preference number: 6 (lower is better)
Translates to: GSPVLGQRCPGGWSD*SGPTPRRALLGTPL
Trigger: GAGTGGTGTTCCCAGAAGGGCTCGGCGAGGCGTGGGGCCACTCAAGTCGGACCAGCCCCCTGGACAACGTTGGCCGAGAACTGGGCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CAA 90 bp CCATCCAGGGTCTGGAGCAGATGGGAGCCCAGTTCTCGGCCAACGTaGTCCAGGGGGCTGGTCCGACTTGAGTGGCCCCACGCCTCGCCG +
Preference number: 6 (lower is better)
Translates to: PSRVWSRWEPSSRPT*SRGLVRLEWPHASP
Trigger: CGGCGAGGCGTGGGGCCACTCAAGTCGGACCAGCCCCCTGGACAACGTTGGCCGAGAACTGGGCTCCCATCTGCTCCAGACCCTGGATGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CAA 72 bp GTTCTCGGCCAACGTTGTCCAGGGGGCTGGTCCGACTaGAGTGGCCCCACGCCTCGCCGAGCCCTTCTGGGA +
Preference number: 6 (lower is better)
Translates to: VLGQRCPGGWSD*SGPTPRRALLG
Trigger: TCCCAGAAGGGCTCGGCGAGGCGTGGGGCCACTCAAGTCGGACCAGCCCCCTGGACAACGTTGGCCGAGAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS TCA 72 bp TTCTCGGCCAACGTTGTCCAGGGGGCTGGTCCGACTTaGGTGGCCCCACGCCTCGCCGAGCCCTTCTGGGAA +
Preference number: 6 (lower is better)
Translates to: FSANVVQGAGPT*VAPRLAEPFWE
Trigger: TTCCCAGAAGGGCTCGGCGAGGCGTGGGGCCACTCAAGTCGGACCAGCCCCCTGGACAACGTTGGCCGAGAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS GCA 72 bp AGAGCTGCGGTCCGAAAACTGTCTGTAGGCGCACGATaGGTCGTGCTGGGAGCCAGGCCTATCGGCGGGGTC +
Preference number: 6 (lower is better)
Translates to: RAAVRKLSVGAR*VVLGARPIGGV
Trigger: GACCCCGCCGATAGGCCTGGCTCCCAGCACGACGCATCGTGCGCCTACAGACAGTTTTCGGACCGCAGCTCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262901.4
ENST00000369208.8
ENST00000505753.1
CDS CAA 72 bp GTCTGGAGCAGATGGGAGCCCAGTTCTCGGCCAACGTaGTCCAGGGGGCTGGTCCGACTTGAGTGGCCCCAC +
Preference number: 6 (lower is better)
Translates to: VWSRWEPSSRPT*SRGLVRLEWPH
Trigger: GTGGGGCCACTCAAGTCGGACCAGCCCCCTGGACAACGTTGGCCGAGAACTGGGCTCCCATCTGCTCCAGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CAA 90 bp GGAGCGCTCGATCTCATACTCCTGCACGAAGTGAGAGTGGTAGGGTaGATGGGCGGTGAGCACCGCCGTCATCTCGTCGTGGTCTGCCGG +
Preference number: 6 (lower is better)
Translates to: GALDLILLHEVRVVG*MGGEHRRHLVVVCR
Trigger: CCGGCAGACCACGACGAGATGACGGCGGTGCTCACCGCCCATCAACCCTACCACTCTCACTTCGTGCAGGAGTATGAGATCGAGCGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CCA 72 bp GCCGGGATTTGGCCCCCTTTCTGTTGTCAGTCATGGTaGGGGTGGAGCTGCTGGTATAGGAGAAGGCTGGTT +
Preference number: 6 (lower is better)
Translates to: AGIWPPFCCQSW*GWSCWYRRRLV
Trigger: AACCAGCCTTCTCCTATACCAGCAGCTCCACCCCCACCATGACTGACAACAGAAAGGGGGCCAAATCCCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CCA 72 bp AGAGCCGGGATTTGGCCCCCTTTCTGTTGTCAGTCATaGTGGGGGTGGAGCTGCTGGTATAGGAGAAGGCTG +
Preference number: 6 (lower is better)
Translates to: RAGIWPPFCCQS*WGWSCWYRRRL
Trigger: CAGCCTTCTCCTATACCAGCAGCTCCACCCCCACCATGACTGACAACAGAAAGGGGGCCAAATCCCGGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CAA 72 bp GATCTCATACTCCTGCACGAAGTGAGAGTGGTAGGGTaGATGGGCGGTGAGCACCGCCGTCATCTCGTCGTG +
Preference number: 6 (lower is better)
Translates to: DLILLHEVRVVG*MGGEHRRHLVV
Trigger: CACGACGAGATGACGGCGGTGCTCACCGCCCATCAACCCTACCACTCTCACTTCGTGCAGGAGTATGAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CAA 72 bp AGGCTGGCGCGGAACATAAACATATTGCTGTGTAGCTaGATCTCCGTGACGGCGCTGGGAGGCAGCGAGTGG +
Preference number: 6 (lower is better)
Translates to: RLARNINILLCS*ISVTALGGSEW
Trigger: CCACTCGCTGCCTCCCAGCGCCGTCACGGAGATCAAGCTACACAGCAATATGTTTATGTTCCGCGCCAGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS TCA 72 bp AGGGTCGTTCAGGGTATCAAATGCCAGTGGGACCCCTaGGGAGCCAGCCTTTTCTTCTACTGCCAGCTGCGA +
Preference number: 6 (lower is better)
Translates to: RVVQGIKCQWDP*GASLFFYCQLR
Trigger: TCGCAGCTGGCAGTAGAAGAAAAGGCTGGCTCCTCAGGGGTCCCACTGGCATTTGATACCCTGAACGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS GCA 72 bp TCGAGTGGTCAAGCGCAAAGCCATAGCAGAGAGAGCTaGGGTCCGAAAACTGTCTGTAGGCGCACGATGCGT +
Preference number: 6 (lower is better)
Translates to: SSGQAQSHSRES*GPKTVCRRTMR
Trigger: ACGCATCGTGCGCCTACAGACAGTTTTCGGACCGCAGCTCTCTCTGCTATGGCTTTGCGCTTGACCACTCGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262901.4
ENST00000369208.8
ENST00000505753.1
CDS CCA 72 bp GGCAGAGAGGAGCAGAGCATTCCCGGCTCCCTTTTCTaGATCATGAATTGGAGGAGGGGTGCGTGGCAGAAA +
Preference number: 6 (lower is better)
Translates to: GREEQSIPGSLF*IMNWRRGAWQK
Trigger: TTTCTGCCACGCACCCCTCCTCCAATTCATGATCCAGAAAAGGGAGCCGGGAATGCTCTGCTCCTCTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS CAA 90 bp CAGAGAGGAGCAGAGCATTCCCGGCTCCCTTTTCTGGATCATGAATaGGAGGAGGGGTGCGTGGCAGAAAGAGGAGGATGCAAGCTTTGG +
Preference number: 6 (lower is better)
Translates to: QRGAEHSRLPFLDHE*EEGCVAERGGCKLW
Trigger: CCAAAGCTTGCATCCTCCTCTTTCTGCCACGCACCCCTCCTCCAATTCATGATCCAGAAAAGGGAGCCGGGAATGCTCTGCTCCTCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS TCA 72 bp CACCTGATTCACTGGCCGACCCAGGGTCTGGAGAACTaGCCACACTATCTTCATCCCAATGACCTCGCCCAT +
Preference number: 6 (lower is better)
Translates to: HLIHWPTQGLEN*PHYLHPNDLAH
Trigger: ATGGGCGAGGTCATTGGGATGAAGATAGTGTGGTCAGTTCTCCAGACCCTGGGTCGGCCAGTGAATCAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CCA 72 bp GGCAAGAGCAGAGCCATGGCAGACTTCACCTGTTGGTaGGGGCTGTTGGTAGTTTGCAAAACACAGGGAGTG +
Preference number: 6 (lower is better)
Translates to: GKSRAMADFTCW*GLLVVCKTQGV
Trigger: CACTCCCTGTGTTTTGCAAACTACCAACAGCCCCCACCAACAGGTGAAGTCTGCCATGGCTCTGCTCTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CCA 72 bp CAGAGCATTCCCGGCTCCCTTTTCTGGATCATGAATTaGAGGAGGGGTGCGTGGCAGAAAGAGGAGGATGCA +
Preference number: 6 (lower is better)
Translates to: QSIPGSLFWIMN*RRGAWQKEEDA
Trigger: TGCATCCTCCTCTTTCTGCCACGCACCCCTCCTCCAATTCATGATCCAGAAAAGGGAGCCGGGAATGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS TCA 72 bp ACCGAATTTGGGCGATCCACCGAATTTGGGCAATCCTaGGGGTCGTTCAGGGTATCAAATGCCAGTGGGACC +
Preference number: 6 (lower is better)
Translates to: TEFGRSTEFGQS*GSFRVSNASGT
Trigger: GGTCCCACTGGCATTTGATACCCTGAACGACCCTCAGGATTGCCCAAATTCGGTGGATCGCCCAAATTCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS CCA 72 bp GTTGGCAAGAGCAGAGCCATGGCAGACTTCACCTGTTaGTGGGGGCTGTTGGTAGTTTGCAAAACACAGGGA +
Preference number: 6 (lower is better)
Translates to: VGKSRAMADFTC*WGLLVVCKTQG
Trigger: TCCCTGTGTTTTGCAAACTACCAACAGCCCCCACCAACAGGTGAAGTCTGCCATGGCTCTGCTCTTGCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CAA 72 bp ATCCCGAATACTGAGGGTATGGGGAAGTCCTGGATTTaGACTTTGAGCTGGAGAGCCGGGATTTGGCCCCCT +
Preference number: 6 (lower is better)
Translates to: IPNTEGMGKSWI*TLSWRAGIWPP
Trigger: AGGGGGCCAAATCCCGGCTCTCCAGCTCAAAGTCAAAATCCAGGACTTCCCCATACCCTCAGTATTCGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CAA 72 bp TGTTGGCAAGAGCAGAGCCATGGCAGACTTCACCTGTaGGTGGGGGCTGTTGGTAGTTTGCAAAACACAGGG +
Preference number: 6 (lower is better)
Translates to: CWQEQSHGRLHL*VGAVGSLQNTG
Trigger: CCCTGTGTTTTGCAAACTACCAACAGCCCCCACCAACAGGTGAAGTCTGCCATGGCTCTGCTCTTGCCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CAA 90 bp GTTTGCTCTTCAGTCTCGCGGCATTTAAGGTATCTCCGAGCCCCTTaGGGAAGAGCAGGAACCCCAGACAACTCTTTCAAGGCCCTTCAG +
Preference number: 6 (lower is better)
Translates to: VCSSVSRHLRYLRAP*GRAGTPDNSFKALQ
Trigger: CTGAAGGGCCTTGAAAGAGTTGTCTGGGGTTCCTGCTCTTCCCAAAGGGGCTCGGAGATACCTTAAATGCCGCGAGACTGAAGAGCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS TCA 72 bp GCTACTTTGATACTGCTCAGTACGATATCGGTCACCTaGTTCACTGGCCGACCCAGGGTCTGGAGAACTGAC +
Preference number: 6 (lower is better)
Translates to: ATLILLSTISVT*FTGRPRVWRTD
Trigger: GTCAGTTCTCCAGACCCTGGGTCGGCCAGTGAATCAGGTGACCGATATCGTACTGAGCAGTATCAAAGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CCA 72 bp CCTCTCTCTGCTGGATATGGTCACATGGTGAAGTGTTaGCAAGAGCAGAGCCATGGCAGACTTCACCTGTTG +
Preference number: 6 (lower is better)
Translates to: PLSAGYGHMVKC*QEQSHGRLHLL
Trigger: CAACAGGTGAAGTCTGCCATGGCTCTGCTCTTGCCAACACTTCACCATGTGACCATATCCAGCAGAGAGAGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CAA 72 bp CCCTCTCTCTGCTGGATATGGTCACATGGTGAAGTGTaGGCAAGAGCAGAGCCATGGCAGACTTCACCTGTT +
Preference number: 6 (lower is better)
Translates to: PSLCWIWSHGEV*ARAEPWQTSPV
Trigger: AACAGGTGAAGTCTGCCATGGCTCTGCTCTTGCCAACACTTCACCATGTGACCATATCCAGCAGAGAGAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CAA 90 bp AACATTTTTCCCTCTCTCTGCTGGATATGGTCACATGGTGAAGTGTaGGCAAGAGCAGAGCCATGGCAGACTTCACCTGTTGGTGGGGGC +
Preference number: 6 (lower is better)
Translates to: NIFPSLCWIWSHGEV*ARAEPWQTSPVGGG
Trigger: GCCCCCACCAACAGGTGAAGTCTGCCATGGCTCTGCTCTTGCCAACACTTCACCATGTGACCATATCCAGCAGAGAGAGGGAAAAATGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CAA 90 bp CTGTGTGAAATCCCGAATACTGAGGGTATGGGGAAGTCCTGGATTTaGACTTTGAGCTGGAGAGCCGGGATTTGGCCCCCTTTCTGTTGT +
Preference number: 6 (lower is better)
Translates to: LCEIPNTEGMGKSWI*TLSWRAGIWPPFCC
Trigger: ACAACAGAAAGGGGGCCAAATCCCGGCTCTCCAGCTCAAAGTCAAAATCCAGGACTTCCCCATACCCTCAGTATTCGGGATTTCACACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS TCA 72 bp TTCATCCCAATGACCTCGCCCATGGATCCTGTGGACTaGAGCGATGTGAGGCATGCTGTTTTCATAGGCTTC +
Preference number: 6 (lower is better)
Translates to: FIPMTSPMDPVD*SDVRHAVFIGF
Trigger: GAAGCCTATGAAAACAGCATGCCTCACATCGCTTCAGTCCACAGGATCCATGGGCGAGGTCATTGGGATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS TCA 72 bp GTGGCAGAAAGAGGAGGATGCAAGCTTTGGGACGAGTaGGGTGATTTTAGAATCCTGGTCCTCCGTAGTTGC +
Preference number: 6 (lower is better)
Translates to: VAERGGCKLWDE*GDFRILVLRSC
Trigger: GCAACTACGGAGGACCAGGATTCTAAAATCACCTCACTCGTCCCAAAGCTTGCATCCTCCTCTTTCTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS GCA 72 bp ATGTATGCATTTCTCTGGTCACTGATGTCGGCTCATTaGCTGGCAAATCCCCGGCCCCTTCTGCCTTTGAAA +
Preference number: 6 (lower is better)
Translates to: MYAFLWSLMSAH*LANPRPLLPLK
Trigger: TTTCAAAGGCAGAAGGGGCCGGGGATTTGCCAGGCAATGAGCCGACATCAGTGACCAGAGAAATGCATACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511871.1
CDS CCA 72 bp TGGGGGCTCAACATTTTTCCCTCTCTCTGCTGGATATaGTCACATGGTGAAGTGTTGGCAAGAGCAGAGCCA +
Preference number: 6 (lower is better)
Translates to: WGLNIFPSLCWI*SHGEVLARAEP
Trigger: TGGCTCTGCTCTTGCCAACACTTCACCATGTGACCATATCCAGCAGAGAGAGGGAAAAATGTTGAGCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CCA 72 bp CTTGTCAAAATACTGCCGGTGAGAGCCAAAGCAGTTTaGAGAGACAGTAGGGTGGTCTCCTGCTGTCTGATG +
Preference number: 6 (lower is better)
Translates to: LVKILPVRAKAV*RDSRVVSCCLM
Trigger: CATCAGACAGCAGGAGACCACCCTACTGTCTCTCCAAACTGCTTTGGCTCTCACCGGCAGTATTTTGACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CCA 72 bp TTGCTGATCCACCGAATTTGGGCGATCCACCGAATTTaGGCAATCCTGAGGGTCGTTCAGGGTATCAAATGC +
Preference number: 6 (lower is better)
Translates to: LLIHRIWAIHRI*AILRVVQGIKC
Trigger: GCATTTGATACCCTGAACGACCCTCAGGATTGCCCAAATTCGGTGGATCGCCCAAATTCGGTGGATCAGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS CCA 72 bp GGATGCAGTATAGGAAAGTTGCTGATCCACCGAATTTaGGCGATCCACCGAATTTGGGCAATCCTGAGGGTC +
Preference number: 6 (lower is better)
Translates to: GCSIGKLLIHRI*AIHRIWAILRV
Trigger: GACCCTCAGGATTGCCCAAATTCGGTGGATCGCCCAAATTCGGTGGATCAGCAACTTTCCTATACTGCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS CAA 72 bp GTTGCTGATCCACCGAATTTGGGCGATCCACCGAATTaGGGCAATCCTGAGGGTCGTTCAGGGTATCAAATG +
Preference number: 6 (lower is better)
Translates to: VADPPNLGDPPN*GNPEGRSGYQM
Trigger: CATTTGATACCCTGAACGACCCTCAGGATTGCCCAAATTCGGTGGATCGCCCAAATTCGGTGGATCAGCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS CAA 72 bp GGGATGCAGTATAGGAAAGTTGCTGATCCACCGAATTaGGGCGATCCACCGAATTTGGGCAATCCTGAGGGT +
Preference number: 6 (lower is better)
Translates to: GMQYRKVADPPN*GDPPNLGNPEG
Trigger: ACCCTCAGGATTGCCCAAATTCGGTGGATCGCCCAAATTCGGTGGATCAGCAACTTTCCTATACTGCATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS CAA 72 bp TATGTATGCATTTCTCTGGTCACTGATGTCGGCTCATaGCCTGGCAAATCCCCGGCCCCTTCTGCCTTTGAA +
Preference number: 6 (lower is better)
Translates to: YVCISLVTDVGS*PGKSPAPSAFE
Trigger: TTCAAAGGCAGAAGGGGCCGGGGATTTGCCAGGCAATGAGCCGACATCAGTGACCAGAGAAATGCATACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511871.1
CDS CAA 90 bp ATGGTGAAGTGTTGGCAAGAGCAGAGCCATGGCAGACTTCACCTGTaGGTGGGGGCTGTTGGTAGTTTGCAAAACACAGGGAGTGTTTTT +
Preference number: 6 (lower is better)
Translates to: MVKCWQEQSHGRLHL*VGAVGSLQNTGSVF
Trigger: AAAAACACTCCCTGTGTTTTGCAAACTACCAACAGCCCCCACCAACAGGTGAAGTCTGCCATGGCTCTGCTCTTGCCAACACTTCACCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CAA 90 bp TATAGGAAAGTTGCTGATCCACCGAATTTGGGCGATCCACCGAATTaGGGCAATCCTGAGGGTCGTTCAGGGTATCAAATGCCAGTGGGA +
Preference number: 6 (lower is better)
Translates to: YRKVADPPNLGDPPN*GNPEGRSGYQMPVG
Trigger: TCCCACTGGCATTTGATACCCTGAACGACCCTCAGGATTGCCCAAATTCGGTGGATCGCCCAAATTCGGTGGATCAGCAACTTTCCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS TCA 72 bp CATTTTTCCCTCTCTCTGCTGGATATGGTCACATGGTaGAGTGTTGGCAAGAGCAGAGCCATGGCAGACTTC +
Preference number: 6 (lower is better)
Translates to: HFSLSLLDMVTW*SVGKSRAMADF
Trigger: GAAGTCTGCCATGGCTCTGCTCTTGCCAACACTTCACCATGTGACCATATCCAGCAGAGAGAGGGAAAAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CCA 72 bp TGTGAAATCCCGAATACTGAGGGTATGGGGAAGTCCTaGATTTTGACTTTGAGCTGGAGAGCCGGGATTTGG +
Preference number: 6 (lower is better)
Translates to: CEIPNTEGMGKS*ILTLSWRAGIW
Trigger: CCAAATCCCGGCTCTCCAGCTCAAAGTCAAAATCCAGGACTTCCCCATACCCTCAGTATTCGGGATTTCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CCA 72 bp TTGTGTCCTTGTGCTGGGTCTGGTTGCATCCTCAGATaGGAAGTTACATCAAAGTGTGAGCCATTACAGCCC +
Preference number: 6 (lower is better)
Translates to: LCPCAGSGCILR*EVTSKCEPLQP
Trigger: GGGCTGTAATGGCTCACACTTTGATGTAACTTCCCATCTGAGGATGCAACCAGACCCAGCACAAGGACACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS GCA 72 bp GCCAAAGCAGTTTGGAGAGACAGTAGGGTGGTCTCCTaGTGTCTGATGAGGAGATATATCCGAATGCAGATA +
Preference number: 6 (lower is better)
Translates to: AKAVWRDSRVVS*CLMRRYIRMQI
Trigger: TATCTGCATTCGGATATATCTCCTCATCAGACAGCAGGAGACCACCCTACTGTCTCTCCAAACTGCTTTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS GCA 72 bp ACAGATGTTCCCTTGTGTCCTTGTGCTGGGTCTGGTTaGATCCTCAGATGGGAAGTTACATCAAAGTGTGAG +
Preference number: 6 (lower is better)
Translates to: TDVPLCPCAGSG*ILRWEVTSKCE
Trigger: CTCACACTTTGATGTAACTTCCCATCTGAGGATGCAACCAGACCCAGCACAAGGACACAAGGGAACATCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CCA 72 bp GATCCGAATTGGGACTACTTATCCGAGATAGTGCGGTaGGACTGTTGTCATAGTCATTTTCATGGGGGCTCA +
Preference number: 6 (lower is better)
Translates to: DPNWDYLSEIVR*DCCHSHFHGGS
Trigger: TGAGCCCCCATGAAAATGACTATGACAACAGTCCCACCGCACTATCTCGGATAAGTAGTCCCAATTCGGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CCA 72 bp GCAAGCTTTGGGACGAGTGAGGTGATTTTAGAATCCTaGTCCTCCGTAGTTGCTACGAAGCCAGTTCACTAT +
Preference number: 6 (lower is better)
Translates to: ASFGTSEVILES*SSVVATKPVHY
Trigger: ATAGTGAACTGGCTTCGTAGCAACTACGGAGGACCAGGATTCTAAAATCACCTCACTCGTCCCAAAGCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS TCA 72 bp GAACCCTGGTCCTCGGAAAATCGACATAATAATCCCTaGCGTTTGCTCTTCAGTCTCGCGGCATTTAAGGTA +
Preference number: 6 (lower is better)
Translates to: EPWSSENRHNNP*RLLFSLAAFKV
Trigger: TACCTTAAATGCCGCGAGACTGAAGAGCAAACGTCAGGGATTATTATGTCGATTTTCCGAGGACCAGGGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS CAA 72 bp GCTAGGATCAAACTGGATTTTGAAATGCGATCCGAATaGGGACTACTTATCCGAGATAGTGCGGTGGGACTG +
Preference number: 6 (lower is better)
Translates to: ARIKLDFEMRSE*GLLIRDSAVGL
Trigger: CAGTCCCACCGCACTATCTCGGATAAGTAGTCCCAATTCGGATCGCATTTCAAAATCCAGTTTGATCCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CAA 72 bp TCCGTTGGTTATTATAACAGATGTTCCCTTGTGTCCTaGTGCTGGGTCTGGTTGCATCCTCAGATGGGAAGT +
Preference number: 6 (lower is better)
Translates to: SVGYYNRCSLVS*CWVWLHPQMGS
Trigger: ACTTCCCATCTGAGGATGCAACCAGACCCAGCACAAGGACACAAGGGAACATCTGTTATAATAACCAACGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CAA 72 bp CATCAGCTTCCGTTGGTTATTATAACAGATGTTCCCTaGTGTCCTTGTGCTGGGTCTGGTTGCATCCTCAGA +
Preference number: 6 (lower is better)
Translates to: HQLPLVIITDVP*CPCAGSGCILR
Trigger: TCTGAGGATGCAACCAGACCCAGCACAAGGACACAAGGGAACATCTGTTATAATAACCAACGGAAGCTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CAA 90 bp TCAGCAAAACATCAGCTTCCGTTGGTTATTATAACAGATGTTCCCTaGTGTCCTTGTGCTGGGTCTGGTTGCATCCTCAGATGGGAAGTT +
Preference number: 6 (lower is better)
Translates to: SAKHQLPLVIITDVP*CPCAGSGCILRWEV
Trigger: AACTTCCCATCTGAGGATGCAACCAGACCCAGCACAAGGACACAAGGGAACATCTGTTATAATAACCAACGGAAGCTGATGTTTTGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CAA 90 bp ATATGTAAATATGTATGCATTTCTCTGGTCACTGATGTCGGCTCATaGCCTGGCAAATCCCCGGCCCCTTCTGCCTTTGAAATTCCATCT +
Preference number: 6 (lower is better)
Translates to: ICKYVCISLVTDVGS*PGKSPAPSAFEIPS
Trigger: AGATGGAATTTCAAAGGCAGAAGGGGCCGGGGATTTGCCAGGCAATGAGCCGACATCAGTGACCAGAGAAATGCATACATATTTACATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511871.1
CDS GCA 72 bp GTTGGTTATTATAACAGATGTTCCCTTGTGTCCTTGTaGTGGGTCTGGTTGCATCCTCAGATGGGAAGTTAC +
Preference number: 6 (lower is better)
Translates to: VGYYNRCSLVSL*WVWLHPQMGSY
Trigger: GTAACTTCCCATCTGAGGATGCAACCAGACCCAGCACAAGGACACAAGGGAACATCTGTTATAATAACCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CCA 72 bp CTAGGATCAAACTGGATTTTGAAATGCGATCCGAATTaGGACTACTTATCCGAGATAGTGCGGTGGGACTGT +
Preference number: 6 (lower is better)
Translates to: LGSNWILKCDPN*DYLSEIVRWDC
Trigger: ACAGTCCCACCGCACTATCTCGGATAAGTAGTCCCAATTCGGATCGCATTTCAAAATCCAGTTTGATCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CCA 72 bp TATAACAGATGTTCCCTTGTGTCCTTGTGCTGGGTCTaGTTGCATCCTCAGATGGGAAGTTACATCAAAGTG +
Preference number: 6 (lower is better)
Translates to: YNRCSLVSLCWV*LHPQMGSYIKV
Trigger: CACTTTGATGTAACTTCCCATCTGAGGATGCAACCAGACCCAGCACAAGGACACAAGGGAACATCTGTTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CAA 90 bp ACATCAGCTTCCGTTGGTTATTATAACAGATGTTCCCTTGTGTCCTaGTGCTGGGTCTGGTTGCATCCTCAGATGGGAAGTTACATCAAA +
Preference number: 6 (lower is better)
Translates to: TSASVGYYNRCSLVS*CWVWLHPQMGSYIK
Trigger: TTTGATGTAACTTCCCATCTGAGGATGCAACCAGACCCAGCACAAGGACACAAGGGAACATCTGTTATAATAACCAACGGAAGCTGATGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CAA 90 bp ACGGAAAATATGTTCTTTGAAAATTCGGGATGCAGTATAGGAAAGTaGCTGATCCACCGAATTTGGGCGATCCACCGAATTTGGGCAATC +
Preference number: 6 (lower is better)
Translates to: TENMFFENSGCSIGK*LIHRIWAIHRIWAI
Trigger: GATTGCCCAAATTCGGTGGATCGCCCAAATTCGGTGGATCAGCAACTTTCCTATACTGCATCCCGAATTTTCAAAGAACATATTTTCCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS TCA 72 bp AGAGTTTCAATTTTGCTGGGTTCATGTGGGCTACTTTaGTACTGCTCAGTACGATATCGGTCACCTGATTCA +
Preference number: 6 (lower is better)
Translates to: RVSILLGSCGLL*YCSVRYRSPDS
Trigger: TGAATCAGGTGACCGATATCGTACTGAGCAGTATCAAAGTAGCCCACATGAACCCAGCAAAATTGAAACTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS TCA 72 bp TGGTTGCATCCTCAGATGGGAAGTTACATCAAAGTGTaGGCCATTACAGCCCAAGGAATAGTTTCTAATGGT +
Preference number: 6 (lower is better)
Translates to: WLHPQMGSYIKV*AITAQGIVSNG
Trigger: ACCATTAGAAACTATTCCTTGGGCTGTAATGGCTCACACTTTGATGTAACTTCCCATCTGAGGATGCAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CCA 72 bp GGCTCTTATAAGAGTTTCAATTTTGCTGGGTTCATGTaGGCTACTTTGATACTGCTCAGTACGATATCGGTC +
Preference number: 6 (lower is better)
Translates to: GSYKSFNFAGFM*ATLILLSTISV
Trigger: GACCGATATCGTACTGAGCAGTATCAAAGTAGCCCACATGAACCCAGCAAAATTGAAACTCTTATAAGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262901.4
ENST00000369208.8
CDS CAA 72 bp ATGTTCTTTGAAAATTCGGGATGCAGTATAGGAAAGTaGCTGATCCACCGAATTTGGGCGATCCACCGAATT +
Preference number: 6 (lower is better)
Translates to: MFFENSGCSIGK*LIHRIWAIHRI
Trigger: AATTCGGTGGATCGCCCAAATTCGGTGGATCAGCAACTTTCCTATACTGCATCCCGAATTTTCAAAGAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369208.8
ENST00000511871.1
CDS TCA 72 bp TTTGGATTAGTAGTACTTTCAATTGAGCCTAGTATCTaGAGTGTTGACAAAAGGACTGTTGGGCTGCTTCCC +
Preference number: 6 (lower is better)
Translates to: FGLVVLSIEPSI*SVDKRTVGLLP
Trigger: GGGAAGCAGCCCAACAGTCCTTTTGTCAACACTTCAGATACTAGGCTCAATTGAAAGTACTACTAATCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511871.1