Pregenerated sensors for SHISAL2A (Homo sapiens)
Ensembl gene IDs: ENSG00000182183Ensembl transcript IDs: ENST00000401050.7, ENST00000424164.1, ENST00000440303.5, ENST00000517870.2
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCTGCCCAGAGGGCATGCCAACCCTGTGGCTTAGTCAGGGTAGCCTaGCTAAGCTCTTGGCCAGAGGCCTGTCTGCAGCTGGGGCTCTTA | + |
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Preference number: 5 (lower is better) Translates to: AAQRACQPCGLVRVA*LSSWPEACLQLGLL Trigger: TAAGAGCCCCAGCTGCAGACAGGCCTCTGGCCAAGAGCTTAGTCAGGCTACCCTGACTAAGCCACAGGGTTGGCATGCCCTCTGGGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000401050.7 ENST00000440303.5 |
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| CDS TCA 90 bp | GGGCTGCCTGGAATGTCACTGGTGGTCACTGTGGCCATGAAGCAATaGTGGAGGAGGCGTTTGGAGTTCACAGCCTGCCCCTCATTGCTC | + |
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Preference number: 5 (lower is better) Translates to: GLPGMSLVVTVAMKQ*WRRRLEFTACPSLL Trigger: GAGCAATGAGGGGCAGGCTGTGAACTCCAAACGCCTCCTCCATCATTGCTTCATGGCCACAGTGACCACCAGTGACATTCCAGGCAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517870.2 |
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| CDS GCA 90 bp | GATTACCTTGTCCATTCCTGTGTTTTCAGAGCCCGGTTCAGGGGCTaGCCAGAGGGCATGCCAACCCTGTGGCTTAGTCAGGGTAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: DYLVHSCVFRARFRG*PEGMPTLWLSQGSL Trigger: CAGGCTACCCTGACTAAGCCACAGGGTTGGCATGCCCTCTGGGCAGCCCCTGAACCGGGCTCTGAAAACACAGGAATGGACAAGGTAATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000401050.7 ENST00000440303.5 |
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| CDS CCA 90 bp | GGGCTCACTTTTGGCACTTCTGCCGCCATGCCTGTGTTCACACCTTaGCAGTCAGGAGAAACCTCCTCAGGGCCTGCTGTCTGTAAGCTC | + |
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Preference number: 5 (lower is better) Translates to: GLTFGTSAAMPVFTP*QSGETSSGPAVCKL Trigger: GAGCTTACAGACAGCAGGCCCTGAGGAGGTTTCTCCTGACTGCCAAGGTGTGAACACAGGCATGGCGGCAGAAGTGCCAAAAGTGAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517870.2 |
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| CDS CCA 90 bp | CTGCGGGTTCAAGCAGGAGTAACTCTGCTGGAGAGGGCTCACTTTTaGCACTTCTGCCGCCATGCCTGTGTTCACACCTTGGCAGTCAGG | + |
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Preference number: 5 (lower is better) Translates to: LRVQAGVTLLERAHF*HFCRHACVHTLAVR Trigger: CCTGACTGCCAAGGTGTGAACACAGGCATGGCGGCAGAAGTGCCAAAAGTGAGCCCTCTCCAGCAGAGTTACTCCTGCTTGAACCCGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517870.2 |
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| CDS TCA 90 bp | GCTGGGGCTCTTAGGGCTGGAGTTCAGCTTCTGGAGCTGTTAGGCTaGAGGAGACTCAGGATCCTTGAGGTTAGTCAGGAGCAGGGTAGG | + |
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Preference number: 5 (lower is better) Translates to: AGALRAGVQLLELLG*RRLRILEVSQEQGR Trigger: CCTACCCTGCTCCTGACTAACCTCAAGGATCCTGAGTCTCCTTCAGCCTAACAGCTCCAGAAGCTGAACTCCAGCCCTAAGAGCCCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000401050.7 ENST00000440303.5 |
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| CDS GCA 90 bp | GCAGAGCACACAGGCGGTAACAATGAAGGCGAGAAGAACCACTGCTaGTACGGACAGGCCTATGAGAGCGCCAATGCTGAGCCACCACAT | + |
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Preference number: 5 (lower is better) Translates to: AEHTGGNNEGEKNHC*YGQAYESANAEPPH Trigger: ATGTGGTGGCTCAGCATTGGCGCTCTCATAGGCCTGTCCGTAGCAGCAGTGGTTCTTCTCGCCTTCATTGTTACCGCCTGTGTGCTCTGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000424164.1 ENST00000440303.5 ENST00000517870.2 |
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| CDS GCA 90 bp | GTAGCAGAGCACACAGGCGGTAACAATGAAGGCGAGAAGAACCACTaGTGCTACGGACAGGCCTATGAGAGCGCCAATGCTGAGCCACCA | + |
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Preference number: 5 (lower is better) Translates to: VAEHTGGNNEGEKNH*CYGQAYESANAEPP Trigger: TGGTGGCTCAGCATTGGCGCTCTCATAGGCCTGTCCGTAGCAGCAGTGGTTCTTCTCGCCTTCATTGTTACCGCCTGTGTGCTCTGCTAC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000424164.1 ENST00000440303.5 ENST00000517870.2 |
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| CDS GCA 90 bp | AGTAACTCTGCTGGAGAGGGCTCACTTTTGGCACTTCTGCCGCCATaGCTGTGTTCACACCTTGGCAGTCAGGAGAAACCTCCTCAGGGC | + |
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Preference number: 5 (lower is better) Translates to: SNSAGEGSLLALLPP*LCSHLGSQEKPPQG Trigger: GCCCTGAGGAGGTTTCTCCTGACTGCCAAGGTGTGAACACAGGCATGGCGGCAGAAGTGCCAAAAGTGAGCCCTCTCCAGCAGAGTTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517870.2 |
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| CDS GCA 90 bp | AGCAATGATGGAGGAGGCGTTTGGAGTTCACAGCCTGCCCCTCATTaGTCTCCAGCTGCGGGTTCAAGCAGGAGTAACTCTGCTGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: SNDGGGVWSSQPAPH*SPAAGSSRSNSAGE Trigger: CTCTCCAGCAGAGTTACTCCTGCTTGAACCCGCAGCTGGAGAGCAATGAGGGGCAGGCTGTGAACTCCAAACGCCTCCTCCATCATTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517870.2 |
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| CDS TCA 90 bp | GCCTGCCTTGTCCTCCATGTGAGCCCCTTGAGGGTGAGAACTGTCTaGTTCCTCTTGTTTGTGGCAACCTGCACAGGTCCTGCTGTCTGT | + |
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Preference number: 5 (lower is better) Translates to: ACLVLHVSPLRVRTV*FLLFVATCTGPAVC Trigger: ACAGACAGCAGGACCTGTGCAGGTTGCCACAAACAAGAGGAATCAGACAGTTCTCACCCTCAAGGGGCTCACATGGAGGACAAGGCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000401050.7 ENST00000440303.5 |
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| CDS GCA 90 bp | AGGAGTTGGGGTAACGGCTGGTCTCCTAGACGTTCACTCCTCCTTTaGTCCATACACTCATTCGTGTGGCTGACACTTGCTGAGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: RSWGNGWSPRRSLLL*SIHSFVWLTLAEAS Trigger: GGAGGCCTCAGCAAGTGTCAGCCACACGAATGAGTGTATGGAGCAAAGGAGGAGTGAACGTCTAGGAGACCAGCCGTTACCCCAACTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000401050.7 ENST00000440303.5 |
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| CDS GCA 90 bp | CAAGCAGGAGTAACTCTGCTGGAGAGGGCTCACTTTTGGCACTTCTaGCGCCATGCCTGTGTTCACACCTTGGCAGTCAGGAGAAACCTC | + |
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Preference number: 5 (lower is better) Translates to: QAGVTLLERAHFWHF*RHACVHTLAVRRNL Trigger: GAGGTTTCTCCTGACTGCCAAGGTGTGAACACAGGCATGGCGGCAGAAGTGCCAAAAGTGAGCCCTCTCCAGCAGAGTTACTCCTGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517870.2 |
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| CDS GCA 90 bp | GCAGAGCACACAGGCGGTAACAATGAAGGCGAGAAGAACCACTGCTaGTACGGACAGGCCTATGAGAGCGCCAATGCTGTAATCTCAGCA | + |
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Preference number: 5 (lower is better) Translates to: AEHTGGNNEGEKNHC*YGQAYESANAVISA Trigger: TGCTGAGATTACAGCATTGGCGCTCTCATAGGCCTGTCCGTAGCAGCAGTGGTTCTTCTCGCCTTCATTGTTACCGCCTGTGTGCTCTGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401050.7 |
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| CDS TCA 90 bp | CTAGACGTTCACTCCTCCTTTGCTCCATACACTCATTCGTGTGGCTaGCACTTGCTGAGGCCTCCTCTGAGGAAGATCTGTCCATGCCCT | + |
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Preference number: 5 (lower is better) Translates to: LDVHSSFAPYTHSCG*HLLRPPLRKICPCP Trigger: AGGGCATGGACAGATCTTCCTCAGAGGAGGCCTCAGCAAGTGTCAGCCACACGAATGAGTGTATGGAGCAAAGGAGGAGTGAACGTCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000401050.7 ENST00000440303.5 |
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| CDS GCA 90 bp | GTAGCAGAGCACACAGGCGGTAACAATGAAGGCGAGAAGAACCACTaGTGCTACGGACAGGCCTATGAGAGCGCCAATGCTGTAATCTCA | + |
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Preference number: 5 (lower is better) Translates to: VAEHTGGNNEGEKNH*CYGQAYESANAVIS Trigger: TGAGATTACAGCATTGGCGCTCTCATAGGCCTGTCCGTAGCAGCAGTGGTTCTTCTCGCCTTCATTGTTACCGCCTGTGTGCTCTGCTAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401050.7 |
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| CDS CCA 90 bp | TCTCCTAGACGTTCACTCCTCCTTTGCTCCATACACTCATTCGTGTaGCTGACACTTGCTGAGGCCTCCTCTGAGGAAGATCTGTCCATG | + |
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Preference number: 5 (lower is better) Translates to: SPRRSLLLCSIHSFV*LTLAEASSEEDLSM Trigger: CATGGACAGATCTTCCTCAGAGGAGGCCTCAGCAAGTGTCAGCCACACGAATGAGTGTATGGAGCAAAGGAGGAGTGAACGTCTAGGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000401050.7 ENST00000440303.5 |
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| CDS CCA 90 bp | TCCTTGAGGTTAGTCAGGAGCAGGGTAGGCCAGATCAGAGTTAGTTaGGGGAAAGGTGAGGCTTCATTACCAGAAGAACCTGATCCAAAG | + |
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Preference number: 5 (lower is better) Translates to: SLRLVRSRVGQIRVS*GKGEASLPEEPDPK Trigger: CTTTGGATCAGGTTCTTCTGGTAATGAAGCCTCACCTTTCCCCCAACTAACTCTGATCTGGCCTACCCTGCTCCTGACTAACCTCAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000401050.7 ENST00000440303.5 |
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| CDS GCA 90 bp | TTTCTGACTGTGCCCACTCTCCTTCAAGATCTGTCTCAACTACCTTaGAGGCTCAGGACTCGGGTAGATTACCTTGTCCATTCCTGTGTT | + |
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Preference number: 5 (lower is better) Translates to: FLTVPTLLQDLSQLP*RLRTRVDYLVHSCV Trigger: AACACAGGAATGGACAAGGTAATCTACCCGAGTCCTGAGCCTGCAAGGTAGTTGAGACAGATCTTGAAGGAGAGTGGGCACAGTCAGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000401050.7 ENST00000440303.5 |
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| CDS TCA 90 bp | GTGATGGTGATGGTGATGATCTGTCTCCACAGCAGTCAATCTCTTTaGACGAATTACAATTGTGGTTGTTGCCAGGAAGTTAGGAACCAC | + |
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Preference number: 5 (lower is better) Translates to: VMVMVMICLHSSQSL*TNYNCGCCQEVRNH Trigger: GTGGTTCCTAACTTCCTGGCAACAACCACAATTGTAATTCGTTCAAAGAGATTGACTGCTGTGGAGACAGATCATCACCATCACCATCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000401050.7 ENST00000424164.1 ENST00000440303.5 |
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| CDS GCA 72 bp | CCGCGGGCAGCTGAAGCCGCGCACCACCTCCTGCTCTaGGCTCACGTAGCTCGTGCAGGCGCCGCTCATCGC | + |
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Preference number: 6 (lower is better) Translates to: PRAAEAAHHLLL*AHVARAGAAHR Trigger: GCGATGAGCGGCGCCTGCACGAGCTACGTGAGCGCAGAGCAGGAGGTGGTGCGCGGCTTCAGCTGCCCGCGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000401050.7 ENST00000440303.5 ENST00000517870.2 |
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| CDS GCA 72 bp | AGGGCCACCACTGGGCCTCCTGGCCATTTGTGTGCCTaGCTTGTCCTCCATGTGAGCCCCTTGAGGGTGAGA | + |
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Preference number: 6 (lower is better) Translates to: RATTGPPGHLCA*LVLHVSPLRVR Trigger: TCTCACCCTCAAGGGGCTCACATGGAGGACAAGGCAGGCACACAAATGGCCAGGAGGCCCAGTGGTGGCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000401050.7 ENST00000440303.5 |
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| CDS GCA 72 bp | ATGAAGGGCCACCACTGGGCCTCCTGGCCATTTGTGTaGCTGCCTTGTCCTCCATGTGAGCCCCTTGAGGGT | + |
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Preference number: 6 (lower is better) Translates to: MKGHHWASWPFV*LPCPPCEPLEG Trigger: ACCCTCAAGGGGCTCACATGGAGGACAAGGCAGGCACACAAATGGCCAGGAGGCCCAGTGGTGGCCCTTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000401050.7 ENST00000440303.5 |
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| CDS CAA 90 bp | GGCATGCCAACCCTGTGGCTTAGTCAGGGTAGCCTGACTAAGCTCTaGGCCAGAGGCCTGTCTGCAGCTGGGGCTCTTAGGGCTGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: GMPTLWLSQGSLTKL*ARGLSAAGALRAGV Trigger: AACTCCAGCCCTAAGAGCCCCAGCTGCAGACAGGCCTCTGGCCAAGAGCTTAGTCAGGCTACCCTGACTAAGCCACAGGGTTGGCATGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000401050.7 ENST00000440303.5 |
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| CDS GCA 72 bp | GTCCATTCCTGTGTTTTCAGAGCCCGGTTCAGGGGCTaGCCAGAGGGCATGCCAACCCTGTGGCTTAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: VHSCVFRARFRG*PEGMPTLWLSQ Trigger: CTGACTAAGCCACAGGGTTGGCATGCCCTCTGGGCAGCCCCTGAACCGGGCTCTGAAAACACAGGAATGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000401050.7 ENST00000440303.5 |
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| CDS CAA 72 bp | ACCCTGTGGCTTAGTCAGGGTAGCCTGACTAAGCTCTaGGCCAGAGGCCTGTCTGCAGCTGGGGCTCTTAGG | + |
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Preference number: 6 (lower is better) Translates to: TLWLSQGSLTKL*ARGLSAAGALR Trigger: CCTAAGAGCCCCAGCTGCAGACAGGCCTCTGGCCAAGAGCTTAGTCAGGCTACCCTGACTAAGCCACAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000401050.7 ENST00000440303.5 |
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| CDS CAA 90 bp | GCTGCGGGTTCAAGCAGGAGTAACTCTGCTGGAGAGGGCTCACTTTaGGCACTTCTGCCGCCATGCCTGTGTTCACACCTTGGCAGTCAG | + |
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Preference number: 6 (lower is better) Translates to: AAGSSRSNSAGEGSL*ALLPPCLCSHLGSQ Trigger: CTGACTGCCAAGGTGTGAACACAGGCATGGCGGCAGAAGTGCCAAAAGTGAGCCCTCTCCAGCAGAGTTACTCCTGCTTGAACCCGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517870.2 |
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| CDS CCA 72 bp | TTTGGCACTTCTGCCGCCATGCCTGTGTTCACACCTTaGCAGTCAGGAGAAACCTCCTCAGGGCCTGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: FGTSAAMPVFTP*QSGETSSGPAV Trigger: GACAGCAGGCCCTGAGGAGGTTTCTCCTGACTGCCAAGGTGTGAACACAGGCATGGCGGCAGAAGTGCCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517870.2 |
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| CDS GCA 72 bp | GTAACTCTGCTGGAGAGGGCTCACTTTTGGCACTTCTaGCGCCATGCCTGTGTTCACACCTTGGCAGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: VTLLERAHFWHF*RHACVHTLAVR Trigger: CCTGACTGCCAAGGTGTGAACACAGGCATGGCGGCAGAAGTGCCAAAAGTGAGCCCTCTCCAGCAGAGTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517870.2 |
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| CDS GCA 72 bp | CACACAGGCGGTAACAATGAAGGCGAGAAGAACCACTaGTGCTACGGACAGGCCTATGAGAGCGCCAATGCT | + |
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Preference number: 6 (lower is better) Translates to: HTGGNNEGEKNH*CYGQAYESANA Trigger: AGCATTGGCGCTCTCATAGGCCTGTCCGTAGCAGCAGTGGTTCTTCTCGCCTTCATTGTTACCGCCTGTGTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000401050.7 ENST00000424164.1 ENST00000440303.5 ENST00000517870.2 |
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| CDS GCA 72 bp | ACAGGCGGTAACAATGAAGGCGAGAAGAACCACTGCTaGTACGGACAGGCCTATGAGAGCGCCAATGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: TGGNNEGEKNHC*YGQAYESANAE Trigger: CTCAGCATTGGCGCTCTCATAGGCCTGTCCGTAGCAGCAGTGGTTCTTCTCGCCTTCATTGTTACCGCCTGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000424164.1 ENST00000440303.5 ENST00000517870.2 |
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| CDS CCA 72 bp | CAAGCAGGAGTAACTCTGCTGGAGAGGGCTCACTTTTaGCACTTCTGCCGCCATGCCTGTGTTCACACCTTG | + |
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Preference number: 6 (lower is better) Translates to: QAGVTLLERAHF*HFCRHACVHTL Trigger: CAAGGTGTGAACACAGGCATGGCGGCAGAAGTGCCAAAAGTGAGCCCTCTCCAGCAGAGTTACTCCTGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517870.2 |
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| CDS TCA 72 bp | AGGCGAGAAGAACCACTGCTGCTACGGACAGGCCTATaGGAGCGCCAATGCTGTAATCTCAGCACTTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: RREEPLLLRTGL*ERQCCNLSTLG Trigger: TCCCAAAGTGCTGAGATTACAGCATTGGCGCTCTCATAGGCCTGTCCGTAGCAGCAGTGGTTCTTCTCGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401050.7 |
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| CDS TCA 72 bp | GTCCTCCATGTGAGCCCCTTGAGGGTGAGAACTGTCTaGTTCCTCTTGTTTGTGGCAACCTGCACAGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: VLHVSPLRVRTV*FLLFVATCTGP Trigger: AGGACCTGTGCAGGTTGCCACAAACAAGAGGAATCAGACAGTTCTCACCCTCAAGGGGCTCACATGGAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000401050.7 ENST00000440303.5 |
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| CDS GCA 72 bp | ACAGGCGGTAACAATGAAGGCGAGAAGAACCACTGCTaGTACGGACAGGCCTATGAGAGCGCCAATGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: TGGNNEGEKNHC*YGQAYESANAV Trigger: TACAGCATTGGCGCTCTCATAGGCCTGTCCGTAGCAGCAGTGGTTCTTCTCGCCTTCATTGTTACCGCCTGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401050.7 |
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| CDS CCA 72 bp | GCCTATGAGAGCGCCAATGCTGTAATCTCAGCACTTTaGGATGACAAGGTGGGCCGATCACTTGAGTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: AYESANAVISAL*DDKVGRSLESR Trigger: CCTGGACTCAAGTGATCGGCCCACCTTGTCATCCCAAAGTGCTGAGATTACAGCATTGGCGCTCTCATAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401050.7 |
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| CDS CAA 72 bp | ACTGCGCCCGGTAGTATCCTCTTGCCTGTAGCTCAGTaGTATCTCAGGGTTGGGCTGCTATCTGATTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: TAPGSILLPVAQ*YLRVGLLSDSA Trigger: GGCTGAATCAGATAGCAGCCCAACCCTGAGATACAACTGAGCTACAGGCAAGAGGATACTACCGGGCGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000401050.7 |
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| CDS CAA 72 bp | TCAAGCAGGAGTAACTCTGCTGGAGAGGGCTCACTTTaGGCACTTCTGCCGCCATGCCTGTGTTCACACCTT | + |
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Preference number: 6 (lower is better) Translates to: SSRSNSAGEGSL*ALLPPCLCSHL Trigger: AAGGTGTGAACACAGGCATGGCGGCAGAAGTGCCAAAAGTGAGCCCTCTCCAGCAGAGTTACTCCTGCTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517870.2 |
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| CDS TCA 72 bp | CACTCCTCCTTTGCTCCATACACTCATTCGTGTGGCTaGCACTTGCTGAGGCCTCCTCTGAGGAAGATCTGT | + |
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Preference number: 6 (lower is better) Translates to: HSSFAPYTHSCG*HLLRPPLRKIC Trigger: ACAGATCTTCCTCAGAGGAGGCCTCAGCAAGTGTCAGCCACACGAATGAGTGTATGGAGCAAAGGAGGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000401050.7 ENST00000440303.5 |
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| CDS TCA 72 bp | CTTAGGGCTGGAGTTCAGCTTCTGGAGCTGTTAGGCTaGAGGAGACTCAGGATCCTTGAGGTTAGTCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: LRAGVQLLELLG*RRLRILEVSQE Trigger: CTCCTGACTAACCTCAAGGATCCTGAGTCTCCTTCAGCCTAACAGCTCCAGAAGCTGAACTCCAGCCCTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000401050.7 ENST00000440303.5 |
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| CDS GCA 72 bp | GGTAACGGCTGGTCTCCTAGACGTTCACTCCTCCTTTaGTCCATACACTCATTCGTGTGGCTGACACTTGCT | + |
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Preference number: 6 (lower is better) Translates to: GNGWSPRRSLLL*SIHSFVWLTLA Trigger: AGCAAGTGTCAGCCACACGAATGAGTGTATGGAGCAAAGGAGGAGTGAACGTCTAGGAGACCAGCCGTTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000401050.7 ENST00000440303.5 |
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| CDS GCA 72 bp | GTGCCCACTCTCCTTCAAGATCTGTCTCAACTACCTTaGAGGCTCAGGACTCGGGTAGATTACCTTGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: VPTLLQDLSQLP*RLRTRVDYLVH Trigger: ATGGACAAGGTAATCTACCCGAGTCCTGAGCCTGCAAGGTAGTTGAGACAGATCTTGAAGGAGAGTGGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000401050.7 ENST00000440303.5 |
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| CDS CAA 72 bp | TGTGCCCACTCTCCTTCAAGATCTGTCTCAACTACCTaGCAGGCTCAGGACTCGGGTAGATTACCTTGTCCA | + |
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Preference number: 6 (lower is better) Translates to: CAHSPSRSVSTT*QAQDSGRLPCP Trigger: TGGACAAGGTAATCTACCCGAGTCCTGAGCCTGCAAGGTAGTTGAGACAGATCTTGAAGGAGAGTGGGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000401050.7 ENST00000440303.5 |
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| CDS CAA 90 bp | CTTTCTGACTGTGCCCACTCTCCTTCAAGATCTGTCTCAACTACCTaGCAGGCTCAGGACTCGGGTAGATTACCTTGTCCATTCCTGTGT | + |
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Preference number: 6 (lower is better) Translates to: LSDCAHSPSRSVSTT*QAQDSGRLPCPFLC Trigger: ACACAGGAATGGACAAGGTAATCTACCCGAGTCCTGAGCCTGCAAGGTAGTTGAGACAGATCTTGAAGGAGAGTGGGCACAGTCAGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000401050.7 ENST00000440303.5 |
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| CDS CCA 72 bp | TTAGTCAGGAGCAGGGTAGGCCAGATCAGAGTTAGTTaGGGGAAAGGTGAGGCTTCATTACCAGAAGAACCT | + |
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Preference number: 6 (lower is better) Translates to: LVRSRVGQIRVS*GKGEASLPEEP Trigger: AGGTTCTTCTGGTAATGAAGCCTCACCTTTCCCCCAACTAACTCTGATCTGGCCTACCCTGCTCCTGACTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000401050.7 ENST00000440303.5 |
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| CDS CAA 72 bp | GATGGTGATGATCTGTCTCCACAGCAGTCAATCTCTTaGAACGAATTACAATTGTGGTTGTTGCCAGGAAGT | + |
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Preference number: 6 (lower is better) Translates to: DGDDLSPQQSIS*NELQLWLLPGS Trigger: ACTTCCTGGCAACAACCACAATTGTAATTCGTTCAAAGAGATTGACTGCTGTGGAGACAGATCATCACCATC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000401050.7 ENST00000424164.1 ENST00000440303.5 |
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| CDS TCA 72 bp | ATGGTGATGATCTGTCTCCACAGCAGTCAATCTCTTTaGACGAATTACAATTGTGGTTGTTGCCAGGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: MVMICLHSSQSL*TNYNCGCCQEV Trigger: AACTTCCTGGCAACAACCACAATTGTAATTCGTTCAAAGAGATTGACTGCTGTGGAGACAGATCATCACCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000401050.7 ENST00000424164.1 ENST00000440303.5 |
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