Pregenerated sensors for SHCBP1L (Homo sapiens)
Ensembl gene IDs: ENSG00000157060Ensembl transcript IDs: ENST00000367547.8, ENST00000467208.5, ENST00000483655.5, ENST00000488956.5, ENST00000497549.2
Found 38 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCACCGGGCGAGGGGAGGCCACCACCGACCGCACTGGGATCGCGGTaGCCTTCAGGGTGGTCGCGGCCGCCGTGTCCCCGGAGACAGCGG | + |
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Preference number: 5 (lower is better) Translates to: SPGEGRPPPTALGSR*PSGWSRPPCPRRQR Trigger: CCGCTGTCTCCGGGGACACGGCGGCCGCGACCACCCTGAAGGGCACCGCGATCCCAGTGCGGTCGGTGGTGGCCTCCCCTCGCCCGGTGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000367547.8 ENST00000488956.5 ENST00000497549.2 |
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| CDS CCA 90 bp | CGCTTTCCCCTTCACCGGGCGAGGGGAGGCCACCACCGACCGCACTaGGATCGCGGTGCCCTTCAGGGTGGTCGCGGCCGCCGTGTCCCC | + |
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Preference number: 5 (lower is better) Translates to: RFPLHRARGGHHRPH*DRGALQGGRGRRVP Trigger: GGGGACACGGCGGCCGCGACCACCCTGAAGGGCACCGCGATCCCAGTGCGGTCGGTGGTGGCCTCCCCTCGCCCGGTGAAGGGGAAAGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000367547.8 ENST00000488956.5 ENST00000497549.2 |
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| CDS CCA 90 bp | GGGAGGCCACCACCGACCGCACTGGGATCGCGGTGCCCTTCAGGGTaGTCGCGGCCGCCGTGTCCCCGGAGACAGCGGAGGCGGACTTCT | + |
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Preference number: 5 (lower is better) Translates to: GRPPPTALGSRCPSG*SRPPCPRRQRRRTS Trigger: AGAAGTCCGCCTCCGCTGTCTCCGGGGACACGGCGGCCGCGACCACCCTGAAGGGCACCGCGATCCCAGTGCGGTCGGTGGTGGCCTCCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367547.8 ENST00000488956.5 ENST00000497549.2 |
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| CDS TCA 90 bp | CCCCGGAGACAGCGGAGGCGGACTTCTCGCCTCGCCTGTCCGGGCTaGTGGTGCGGAATGAGTCCGCGGGCACCGAGGCCTTGGAGCCCG | + |
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Preference number: 5 (lower is better) Translates to: PRRQRRRTSRLACPG*WCGMSPRAPRPWSP Trigger: CGGGCTCCAAGGCCTCGGTGCCCGCGGACTCATTCCGCACCATCAGCCCGGACAGGCGAGGCGAGAAGTCCGCCTCCGCTGTCTCCGGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000367547.8 ENST00000488956.5 |
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| CDS GCA 90 bp | CTCTGGCCAATAGGCGCTCTGCGCTTCAGGCCCGCAACGAGCGGCTaGTCGAGGGCGTCCCGCCGGGTGGGGTGTTGCGGCTCTGGGAGG | + |
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Preference number: 5 (lower is better) Translates to: LWPIGALRFRPATSG*SRASRRVGCCGSGR Trigger: CCTCCCAGAGCCGCAACACCCCACCCGGCGGGACGCCCTCGAGCAGCCGCTCGTTGCGGGCCTGAAGCGCAGAGCGCCTATTGGCCAGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488956.5 |
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| CDS CCA 90 bp | GGCCTGCGGGTAGAGCGCGGGGTCCTGCGGACGCATTCAGGGTGCTaGGGGGCGCTGCTCAGAGCTAGGTGGGACAGGGCGAAGCGCCTG | + |
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Preference number: 5 (lower is better) Translates to: GLRVERGVLRTHSGC*GALLRARWDRAKRL Trigger: CAGGCGCTTCGCCCTGTCCCACCTAGCTCTGAGCAGCGCCCCCCAGCACCCTGAATGCGTCCGCAGGACCCCGCGCTCTACCCGCAGGCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000488956.5 |
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| CDS CCA 90 bp | AGGGCCGAGGCAGCCGTTGGCCACTTTTCCCGCCCTCGGCCGCTCTaGCCAATAGGCGCTCTGCGCTTCAGGCCCGCAACGAGCGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: RAEAAVGHFSRPRPL*PIGALRFRPATSGC Trigger: GCAGCCGCTCGTTGCGGGCCTGAAGCGCAGAGCGCCTATTGGCCAGAGCGGCCGAGGGCGGGAAAAGTGGCCAACGGCTGCCTCGGCCCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488956.5 |
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| CDS TCA 90 bp | GGAGGCGGACTTCTCGCCTCGCCTGTCCGGGCTGATGGTGCGGAATaGGTCCGCGGGCACCGAGGCCTTGGAGCCCGACGCCATCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: GGGLLASPVRADGAE*VRGHRGLGARRHLL Trigger: GAGGAGATGGCGTCGGGCTCCAAGGCCTCGGTGCCCGCGGACTCATTCCGCACCATCAGCCCGGACAGGCGAGGCGAGAAGTCCGCCTCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367547.8 ENST00000488956.5 |
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| CDS GCA 90 bp | GTCCAGCCTGACCAACTGGAGAAACCCCATCTGTACTTACAGTCCTaGAGCACTTCGTCGCAATACAGCGACACCTTCTCGTCCCGCCAC | + |
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Preference number: 5 (lower is better) Translates to: VQPDQLEKPHLYLQS*STSSQYSDTFSSRH Trigger: GTGGCGGGACGAGAAGGTGTCGCTGTATTGCGACGAAGTGCTGCAGGACTGTAAGTACAGATGGGGTTTCTCCAGTTGGTCAGGCTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483655.5 |
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| CDS TCA 90 bp | CTTCATCAGCATCTTCTGCCTGAGGTCGGGAGTTCGAGTCCAGCCTaGCCAACTGGAGAAACCCCATCTGTACTTACAGTCCTGCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: LHQHLLPEVGSSSPA*PTGETPSVLTVLQH Trigger: GTGCTGCAGGACTGTAAGTACAGATGGGGTTTCTCCAGTTGGTCAGGCTGGACTCGAACTCCCGACCTCAGGCAGAAGATGCTGATGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483655.5 |
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| CDS TCA 90 bp | ACTCCTGTTCCTTCACATTTTAATATGCAGTTTTCTAGAGTCATGTaGCCAGACTCCACCACCACGATACCATCAACCGTCCCTTGTTGT | + |
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Preference number: 5 (lower is better) Translates to: TPVPSHFNMQFSRVM*PDSTTTIPSTVPCC Trigger: ACAACAAGGGACGGTTGATGGTATCGTGGTGGTGGAGTCTGGTCACATGACTCTAGAAAACTGCATATTAAAATGTGAAGGAACAGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000367547.8 ENST00000483655.5 ENST00000488956.5 |
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| CDS CCA 90 bp | CACACTGTGTTCCAGTTCCTCCAAAATCTCATCAACCAAATCTCTTaGAATATTTGCAATGTTGGAAGAAAAGGGCTCAGCAACAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: HTVFQFLQNLINQIS*NICNVGRKGLSNRN Trigger: GTTTCTGTTGCTGAGCCCTTTTCTTCCAACATTGCAAATATTCCAAGAGATTTGGTTGATGAGATTTTGGAGGAACTGGAACACAGTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000367547.8 ENST00000467208.5 ENST00000483655.5 ENST00000488956.5 |
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| CDS TCA 90 bp | CATTCAACAGCCTCTGCTGCAGATGGATCTTCTTTAATATTGCTCTaGTACTCAATGAGCTCGACACGTTTGTTTTTATATTTCTCCAAA | + |
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Preference number: 5 (lower is better) Translates to: HSTASAADGSSLILL*YSMSSTRLFLYFSK Trigger: TTTGGAGAAATATAAAAACAAACGTGTCGAGCTCATTGAGTATCAGAGCAATATTAAAGAAGATCCATCTGCAGCAGAGGCTGTTGAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000367547.8 ENST00000483655.5 ENST00000488956.5 |
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| CDS GCA 90 bp | TCCATCCTGTATATCACACCACAAATTAATTCTTTCTTCAATAAGTaGAGTATAATTCTCACAACTTTCTTCATCATCCCAGTCTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: SILYITPQINSFFNK*SIILTTFFIIPVSP Trigger: TGGAGAGACTGGGATGATGAAGAAAGTTGTGAGAATTATACTGCACTTATTGAAGAAAGAATTAATTTGTGGTGTGATATACAGGATGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367547.8 ENST00000483655.5 |
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| CDS CCA 72 bp | CGGCCTGAGCCGCGGGCAGGCGCTGGAGCCGCAGCCTaGCCGTCTCCCGGCCCGCTTTCCCCTTCACCGGGC | + |
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Preference number: 6 (lower is better) Translates to: RPEPRAGAGAAA*PSPGPLSPSPG Trigger: GCCCGGTGAAGGGGAAAGCGGGCCGGGAGACGGCCAGGCTGCGGCTCCAGCGCCTGCCCGCGGCTCAGGCCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000367547.8 ENST00000483655.5 ENST00000488956.5 ENST00000497549.2 |
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| CDS GCA 72 bp | GAGGGGAGGCCACCACCGACCGCACTGGGATCGCGGTaGCCTTCAGGGTGGTCGCGGCCGCCGTGTCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: EGRPPPTALGSR*PSGWSRPPCPR Trigger: CCGGGGACACGGCGGCCGCGACCACCCTGAAGGGCACCGCGATCCCAGTGCGGTCGGTGGTGGCCTCCCCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000367547.8 ENST00000488956.5 ENST00000497549.2 |
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| CDS CCA 72 bp | CCACCGACCGCACTGGGATCGCGGTGCCCTTCAGGGTaGTCGCGGCCGCCGTGTCCCCGGAGACAGCGGAGG | + |
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Preference number: 6 (lower is better) Translates to: PPTALGSRCPSG*SRPPCPRRQRR Trigger: CCTCCGCTGTCTCCGGGGACACGGCGGCCGCGACCACCCTGAAGGGCACCGCGATCCCAGTGCGGTCGGTGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367547.8 ENST00000488956.5 ENST00000497549.2 |
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| CDS CCA 72 bp | CTTCACCGGGCGAGGGGAGGCCACCACCGACCGCACTaGGATCGCGGTGCCCTTCAGGGTGGTCGCGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: LHRARGGHHRPH*DRGALQGGRGR Trigger: GCGGCCGCGACCACCCTGAAGGGCACCGCGATCCCAGTGCGGTCGGTGGTGGCCTCCCCTCGCCCGGTGAAG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367547.8 ENST00000488956.5 ENST00000497549.2 |
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| CDS CAA 72 bp | GAGCGGCTGCTCGAGGGCGTCCCGCCGGGTGGGGTGTaGCGGCTCTGGGAGGGATGTGAGGCGCGGCCCAGA | + |
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Preference number: 6 (lower is better) Translates to: ERLLEGVPPGGV*RLWEGCEARPR Trigger: TCTGGGCCGCGCCTCACATCCCTCCCAGAGCCGCAACACCCCACCCGGCGGGACGCCCTCGAGCAGCCGCTC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488956.5 |
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| CDS GCA 72 bp | ATAGGCGCTCTGCGCTTCAGGCCCGCAACGAGCGGCTaGTCGAGGGCGTCCCGCCGGGTGGGGTGTTGCGGC | + |
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Preference number: 6 (lower is better) Translates to: IGALRFRPATSG*SRASRRVGCCG Trigger: GCCGCAACACCCCACCCGGCGGGACGCCCTCGAGCAGCCGCTCGTTGCGGGCCTGAAGCGCAGAGCGCCTAT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488956.5 |
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| CDS TCA 72 bp | CTTCTCGCCTCGCCTGTCCGGGCTGATGGTGCGGAATaGGTCCGCGGGCACCGAGGCCTTGGAGCCCGACGC | + |
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Preference number: 6 (lower is better) Translates to: LLASPVRADGAE*VRGHRGLGARR Trigger: GCGTCGGGCTCCAAGGCCTCGGTGCCCGCGGACTCATTCCGCACCATCAGCCCGGACAGGCGAGGCGAGAAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367547.8 ENST00000488956.5 |
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| CDS TCA 72 bp | CAGCGGAGGCGGACTTCTCGCCTCGCCTGTCCGGGCTaGTGGTGCGGAATGAGTCCGCGGGCACCGAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: QRRRTSRLACPG*WCGMSPRAPRP Trigger: AGGCCTCGGTGCCCGCGGACTCATTCCGCACCATCAGCCCGGACAGGCGAGGCGAGAAGTCCGCCTCCGCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000367547.8 ENST00000488956.5 |
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| CDS CCA 72 bp | GTAGAGCGCGGGGTCCTGCGGACGCATTCAGGGTGCTaGGGGGCGCTGCTCAGAGCTAGGTGGGACAGGGCG | + |
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Preference number: 6 (lower is better) Translates to: VERGVLRTHSGC*GALLRARWDRA Trigger: CGCCCTGTCCCACCTAGCTCTGAGCAGCGCCCCCCAGCACCCTGAATGCGTCCGCAGGACCCCGCGCTCTAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000488956.5 |
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| CDS CAA 72 bp | GCCATCTCCTCAGCAGCCCGAGGGCCGAGGCAGCCGTaGGCCACTTTTCCCGCCCTCGGCCGCTCTGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: AISSAARGPRQP*ATFPALGRSGQ Trigger: TTGGCCAGAGCGGCCGAGGGCGGGAAAAGTGGCCAACGGCTGCCTCGGCCCTCGGGCTGCTGAGGAGATGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488956.5 |
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| CDS CCA 72 bp | GCAGCCGTTGGCCACTTTTCCCGCCCTCGGCCGCTCTaGCCAATAGGCGCTCTGCGCTTCAGGCCCGCAACG | + |
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Preference number: 6 (lower is better) Translates to: AAVGHFSRPRPL*PIGALRFRPAT Trigger: CGTTGCGGGCCTGAAGCGCAGAGCGCCTATTGGCCAGAGCGGCCGAGGGCGGGAAAAGTGGCCAACGGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488956.5 |
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| CDS CCA 72 bp | CCATCTCCTCAGCAGCCCGAGGGCCGAGGCAGCCGTTaGCCACTTTTCCCGCCCTCGGCCGCTCTGGCCAAT | + |
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Preference number: 6 (lower is better) Translates to: PSPQQPEGRGSR*PLFPPSAALAN Trigger: ATTGGCCAGAGCGGCCGAGGGCGGGAAAAGTGGCCAACGGCTGCCTCGGCCCTCGGGCTGCTGAGGAGATGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000488956.5 |
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| CDS TCA 72 bp | CATCTTCTGCCTGAGGTCGGGAGTTCGAGTCCAGCCTaGCCAACTGGAGAAACCCCATCTTACAGTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: HLLPEVGSSSPA*PTGETPSYSPA Trigger: TGCAGGACTGTAAGATGGGGTTTCTCCAGTTGGTCAGGCTGGACTCGAACTCCCGACCTCAGGCAGAAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000497549.2 |
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| CDS TCA 72 bp | CATCTTCTGCCTGAGGTCGGGAGTTCGAGTCCAGCCTaGCCAACTGGAGAAACCCCATCTGTACTTACAGTC | + |
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Preference number: 6 (lower is better) Translates to: HLLPEVGSSSPA*PTGETPSVLTV Trigger: GACTGTAAGTACAGATGGGGTTTCTCCAGTTGGTCAGGCTGGACTCGAACTCCCGACCTCAGGCAGAAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483655.5 |
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| CDS GCA 72 bp | GACCAACTGGAGAAACCCCATCTGTACTTACAGTCCTaGAGCACTTCGTCGCAATACAGCGACACCTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: DQLEKPHLYLQS*STSSQYSDTFS Trigger: CGAGAAGGTGTCGCTGTATTGCGACGAAGTGCTGCAGGACTGTAAGTACAGATGGGGTTTCTCCAGTTGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483655.5 |
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| CDS TCA 72 bp | CCTTCACATTTTAATATGCAGTTTTCTAGAGTCATGTaGCCAGACTCCACCACCACGATACCATCAACCGTC | + |
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Preference number: 6 (lower is better) Translates to: PSHFNMQFSRVM*PDSTTTIPSTV Trigger: GACGGTTGATGGTATCGTGGTGGTGGAGTCTGGTCACATGACTCTAGAAAACTGCATATTAAAATGTGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000367547.8 ENST00000483655.5 ENST00000488956.5 |
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| CDS CAA 90 bp | CCTGACAACTTCCAAGGCCAAAGCAATAACATGTATATCAGTATCTaGTCCCTCAACAGGATACACTTCCAAAAGAGGCACACTGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: PDNFQGQSNNMYISI*SLNRIHFQKRHTVF Trigger: GAACACAGTGTGCCTCTTTTGGAAGTGTATCCTGTTGAGGGACAAGATACTGATATACATGTTATTGCTTTGGCCTTGGAAGTTGTCAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000367547.8 ENST00000467208.5 ENST00000483655.5 ENST00000488956.5 |
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| CDS CAA 72 bp | GTGAACGCTCTATACATGTTGACTCCATTTACTTTTTaGAAACGCAAGTTTTCGTTGTGCCCTGTGGATCCC | + |
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Preference number: 6 (lower is better) Translates to: VNALYMLTPFTF*KRKFSLCPVDP Trigger: GGGATCCACAGGGCACAACGAAAACTTGCGTTTCAAAAAAGTAAATGGAGTCAACATGTATAGAGCGTTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000467208.5 |
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| CDS CAA 72 bp | TTCCAAGGCCAAAGCAATAACATGTATATCAGTATCTaGTCCCTCAACAGGATACACTTCCAAAAGAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: FQGQSNNMYISI*SLNRIHFQKRH Trigger: GTGCCTCTTTTGGAAGTGTATCCTGTTGAGGGACAAGATACTGATATACATGTTATTGCTTTGGCCTTGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000367547.8 ENST00000467208.5 ENST00000483655.5 ENST00000488956.5 |
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| CDS CAA 90 bp | GCACACTGTGTTCCAGTTCCTCCAAAATCTCATCAACCAAATCTCTaGGAATATTTGCAATGTTGGAAGAAAAGGGCTCAGCAACAGAAA | + |
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Preference number: 6 (lower is better) Translates to: AHCVPVPPKSHQPNL*EYLQCWKKRAQQQK Trigger: TTTCTGTTGCTGAGCCCTTTTCTTCCAACATTGCAAATATTCCAAGAGATTTGGTTGATGAGATTTTGGAGGAACTGGAACACAGTGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000367547.8 ENST00000467208.5 ENST00000483655.5 ENST00000488956.5 |
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| CDS CAA 90 bp | TCAACCGTCCCTTGTTGTATCAAAGATAGATGCATTAGTTTCACATaGTCAGCTTTGGACACCACAAAACTGTCACGAGAAGGTTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: STVPCCIKDRCISFT*SALDTTKLSREGSE Trigger: TTCTGAACCTTCTCGTGACAGTTTTGTGGTGTCCAAAGCTGACAATGTGAAACTAATGCATCTATCTTTGATACAACAAGGGACGGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000367547.8 ENST00000483655.5 ENST00000488956.5 |
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| CDS CAA 72 bp | GTTCCAGTTCCTCCAAAATCTCATCAACCAAATCTCTaGGAATATTTGCAATGTTGGAAGAAAAGGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: VPVPPKSHQPNL*EYLQCWKKRAQ Trigger: CTGAGCCCTTTTCTTCCAACATTGCAAATATTCCAAGAGATTTGGTTGATGAGATTTTGGAGGAACTGGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000367547.8 ENST00000467208.5 ENST00000483655.5 ENST00000488956.5 |
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| CDS CAA 90 bp | TCCTCCAAAATCTCATCAACCAAATCTCTTGGAATATTTGCAATGTaGGAAGAAAAGGGCTCAGCAACAGAAACAGTAACTTTGAAACGA | + |
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Preference number: 6 (lower is better) Translates to: SSKISSTKSLGIFAM*EEKGSATETVTLKR Trigger: TCGTTTCAAAGTTACTGTTTCTGTTGCTGAGCCCTTTTCTTCCAACATTGCAAATATTCCAAGAGATTTGGTTGATGAGATTTTGGAGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000367547.8 ENST00000467208.5 ENST00000483655.5 ENST00000488956.5 |
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| CDS CCA 72 bp | ACAGAAACAGTAACTTTGAAACGAGATGATGAGTCTTaGTATGGTTCACAAGTTACCTCAACCAATATACCA | + |
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Preference number: 6 (lower is better) Translates to: TETVTLKRDDES*YGSQVTSTNIP Trigger: TGGTATATTGGTTGAGGTAACTTGTGAACCATACCAAGACTCATCATCTCGTTTCAAAGTTACTGTTTCTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000367547.8 ENST00000467208.5 ENST00000483655.5 ENST00000488956.5 |
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