Pregenerated sensors for SHC1 (Homo sapiens)
Ensembl gene IDs: ENSG00000160691Ensembl transcript IDs: ENST00000368445.9, ENST00000368449.8, ENST00000368450.5, ENST00000368453.8, ENST00000444664.5, ENST00000448116.7
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GATCCCAGTTACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGGGTCCATCTCCCGCCTaGCCGGGAGTGGGGCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: DPSYLTGLGEENAKSCKRGPSPA*PGVGLW Trigger: CCAGAGCCCCACTCCCGGCCAGGCGGGAGATGGACC...CCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTAACTGGGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 5 transcripts: ENST00000368445.9 ENST00000368449.8 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| 3UTR-3UTR CCA 90 bp | TACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGGCTTGGAAAGGTCCATCTCCCGCCTaGCCGGGAGTGGGGCTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: YLTGLGEENAKSCKRAWKGPSPA*PGVGLW Trigger: CCAGAGCCCCACTCCCGGCCAGGCGGGAGATGGACC...TTTCCAAGCCCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENST00000368445.9 ENST00000368449.8 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| 3UTR-3UTR GCA 90 bp | GATCCCAGTTACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGCCAAACCGGAGAGGGTaGTCAGCAAGAACACAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: DPSYLTGLGEENAKSCKRPNRRG*SARTQV Trigger: GACCTGTGTTCTTGCTGAGCACCCTCTCCGGTTTGG...CCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTAACTGGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000368445.9 ENST00000368449.8 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| 3UTR-3UTR GCA 90 bp | TACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGGCTTGGAAACCAAACCGGAGAGGGTaGTCAGCAAGAACACAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: YLTGLGEENAKSCKRAWKPNRRG*SARTQV Trigger: GACCTGTGTTCTTGCTGAGCACCCTCTCCGGTTTGG...TTTCCAAGCCCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000368445.9 ENST00000368449.8 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| 3UTR-3UTR TCA 90 bp | GATCCCAGTTACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGTGGCATCCCTGTCATTaGATTCAGGGGTCCAAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: DPSYLTGLGEENAKSCKRWHPCH*IQGSKN Trigger: GTTCTTGGACCCCTGAATTCAATGACAGGGATGCCA...CCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTAACTGGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENST00000368445.9 ENST00000368449.8 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| 3UTR-3UTR CCA 90 bp | GATCCCAGTTACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGGGAAGGGCTGCACTTTaGCGTAGAGTACATAGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: DPSYLTGLGEENAKSCKRGRAAL*RRVHRH Trigger: ATGCCTATGTACTCTACGCCAAAGTGCAGCCCTTCC...CCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTAACTGGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENST00000368445.9 ENST00000368449.8 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| 3UTR-3UTR TCA 90 bp | TACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGGCTTGGAAATGGCATCCCTGTCATTaGATTCAGGGGTCCAAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: YLTGLGEENAKSCKRAWKWHPCH*IQGSKN Trigger: GTTCTTGGACCCCTGAATTCAATGACAGGGATGCCA...TTTCCAAGCCCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENST00000368445.9 ENST00000368449.8 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| 3UTR-3UTR CCA 90 bp | TACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGGCTTGGAAAGGAAGGGCTGCACTTTaGCGTAGAGTACATAGGCAT | + |
|
Preference number: 2 (lower is better) Translates to: YLTGLGEENAKSCKRAWKGRAAL*RRVHRH Trigger: ATGCCTATGTACTCTACGCCAAAGTGCAGCCCTTCC...TTTCCAAGCCCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000368445.9 ENST00000368449.8 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| 3UTR-3UTR CCA 90 bp | GTGAAGAGTCAAATAAGACCTCAGCCTCCAAGGTGGAAGAGGGTGAAACAGACATGGTGGGGGAGAGTGTaGCCTGTCAATCCTGATCAT | + |
|
Preference number: 2 (lower is better) Translates to: VKSQIRPQPPRWKRVKQTWWGRV*PVNPDH Trigger: ATGATCAGGATTGACAGGCCACACTCTCCCCCACCA...TGTCTGTTTCACCCTCTTCCACCTTGGAGGCTGAGGTCTTATTTGACTCTTCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000444664.5 |
||
| CDS-3UTR GCA 90 bp | GATCCCAGTTACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGCTTCCACCCGAGTCCTaGGCCCGCCGCCTCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: DPSYLTGLGEENAKSCKRLPPES*ARRLHS Trigger: TGAGTGGAGGCGGCGGGCGCAGGACTCGGGTGGAAG...CCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTAACTGGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000368445.9 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| CDS-3UTR TCA 90 bp | GATCCCAGTTACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGCCCGCGTGGGCTTATTaGCAAAGCTCCCGTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: DPSYLTGLGEENAKSCKRPAWAY*QSSRGG Trigger: CCCGCCACGGGAGCTTTGTCAATAAGCCCACGCGGG...CCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTAACTGGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000368445.9 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| CDS-3UTR GCA 90 bp | GATCCCAGTTACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGCGCGGGCCGATTTGGTaGCGGATCACGCCACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DPSYLTGLGEENAKSCKRRGPIW*RITPLP Trigger: TGGCAGTGGCGTGATCCGGCACCAAATCGGCCCGCG...CCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTAACTGGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368450.5 ENST00000368453.8 |
||
| CDS-3UTR TCA 90 bp | TACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGGCTTGGAAACCCGCGTGGGCTTATTaGCAAAGCTCCCGTGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: YLTGLGEENAKSCKRAWKPAWAY*QSSRGG Trigger: CCCGCCACGGGAGCTTTGTCAATAAGCCCACGCGGG...TTTCCAAGCCCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000368445.9 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| CDS-3UTR GCA 90 bp | TACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGGCTTGGAAACGCGGGCCGATTTGGTaGCGGATCACGCCACTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YLTGLGEENAKSCKRAWKRGPIW*RITPLP Trigger: TGGCAGTGGCGTGATCCGGCACCAAATCGGCCCGCG...TTTCCAAGCCCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368450.5 ENST00000368453.8 |
||
| CDS-3UTR GCA 90 bp | GATCCCAGTTACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGACTTTGTCGTTGGGATaGAGCCAGCCCCGCGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DPSYLTGLGEENAKSCKRTLSLG*SQPRVG Trigger: GCCCACGCGGGGCTGGCTGCATCCCAACGACAAAGT...CCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTAACTGGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000368445.9 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| CDS-3UTR CCA 90 bp | TACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGGCTTGGAAACACCGCGGGCCGATTTaGTGCCGGATCACGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: YLTGLGEENAKSCKRAWKHRGPI*CRITPL Trigger: CAGTGGCGTGATCCGGCACCAAATCGGCCCGCGGTG...TTTCCAAGCCCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368450.5 ENST00000368453.8 |
||
| CDS-3UTR CCA 90 bp | GATCCCAGTTACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGCACCGACTGGGGAGGTaGAGGCACGCGAAGAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: DPSYLTGLGEENAKSCKRHRLGR*RHAKSI Trigger: GATGCTCTTCGCGTGCCTCCACCTCCCCAGTCGGTG...CCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTAACTGGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENST00000368445.9 ENST00000368449.8 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| CDS-3UTR GCA 90 bp | GATCCCAGTTACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGGCCGGATCACGCCACTaGCAGCTTAGGTTACCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DPSYLTGLGEENAKSCKRAGSRH*QLRLPL Trigger: GAGCGGTAACCTAAGCTGGCAGTGGCGTGATCCGGC...CCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTAACTGGGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368450.5 ENST00000368453.8 |
||
| CDS-3UTR GCA 90 bp | TACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGGCTTGGAAAACTTTGTCGTTGGGATaGAGCCAGCCCCGCGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: YLTGLGEENAKSCKRAWKTLSLG*SQPRVG Trigger: GCCCACGCGGGGCTGGCTGCATCCCAACGACAAAGT...TTTCCAAGCCCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENST00000368445.9 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| CDS-3UTR CCA 90 bp | TACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGGCTTGGAAACACCGACTGGGGAGGTaGAGGCACGCGAAGAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: YLTGLGEENAKSCKRAWKHRLGR*RHAKSI Trigger: GATGCTCTTCGCGTGCCTCCACCTCCCCAGTCGGTG...TTTCCAAGCCCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENST00000368445.9 ENST00000368449.8 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| CDS-3UTR GCA 90 bp | TACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGGCTTGGAAAGCCGGATCACGCCACTaGCAGCTTAGGTTACCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YLTGLGEENAKSCKRAWKAGSRH*QLRLPL Trigger: GAGCGGTAACCTAAGCTGGCAGTGGCGTGATCCGGC...TTTCCAAGCCCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368450.5 ENST00000368453.8 |
||
| CDS-3UTR CCA 90 bp | GTGAAGAGTCAAATAAGACCTCAGCCTCCAAGGTGGAAGAGGGTGAAACAGACACACCGACTGGGGAGGTaGAGGCACGCGAAGAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: VKSQIRPQPPRWKRVKQTHRLGR*RHAKSI Trigger: GATGCTCTTCGCGTGCCTCCACCTCCCCAGTCGGTG...TGTCTGTTTCACCCTCTTCCACCTTGGAGGCTGAGGTCTTATTTGACTCTTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444664.5 |
||
| CDS-3UTR TCA 90 bp | GATCCCAGTTACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGAAACCCCGGGTCCCATaGCTTTGTCGTTGGGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: DPSYLTGLGEENAKSCKRKPRVP*LCRWDA Trigger: TGCATCCCAACGACAAAGTCATGGGACCCGGGGTTT...CCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTAACTGGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000368445.9 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| CDS-3UTR TCA 90 bp | GTGAAGAGTCAAATAAGACCTCAGCCTCCAAGGTGGAAGAGGGTGAAACAGACAGGGAGGCGGATCACTTaGGCCCGGGAGTTCAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VKSQIRPQPPRWKRVKQTGRRIT*AREFKN Trigger: GTTCTTGAACTCCCGGGCTCAAGTGATCCGCCTCCC...TGTCTGTTTCACCCTCTTCCACCTTGGAGGCTGAGGTCTTATTTGACTCTTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444664.5 |
||
| CDS-3UTR TCA 90 bp | TACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGGCTTGGAAAAAACCCCGGGTCCCATaGCTTTGTCGTTGGGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: YLTGLGEENAKSCKRAWKKPRVP*LCRWDA Trigger: TGCATCCCAACGACAAAGTCATGGGACCCGGGGTTT...TTTCCAAGCCCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENST00000368445.9 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| CDS-3UTR TCA 90 bp | TACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGGCTTGGAAATGTGGTGGTTGGCGATaGTCTGTTTGCAGTCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: YLTGLGEENAKSCKRAWKCGGWR*SVCSLR Trigger: CCGCAGACTGCAAACAGATCATCGCCAACCACCACA...TTTCCAAGCCCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000368445.9 ENST00000368449.8 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| CDS-3UTR TCA 90 bp | GTGAAGAGTCAAATAAGACCTCAGCCTCCAAGGTGGAAGAGGGTGAAACAGACAAGGCGACATCAGCCCTaGAAGAGTGAAGCTGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VKSQIRPQPPRWKRVKQTRRHQP*KSEAES Trigger: GCTCTCAGCTTCACTCTTTCAGGGCTGATGTCGCCT...TGTCTGTTTCACCCTCTTCCACCTTGGAGGCTGAGGTCTTATTTGACTCTTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444664.5 |
||
| CDS-3UTR CCA 90 bp | GATCCCAGTTACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGTCTGCCTCAGGTCTCTaGTATAAAAGGTGCGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: DPSYLTGLGEENAKSCKRSASGL*YKRCDP Trigger: GGGATCGCACCTTTTATACCAGAGACCTGAGGCAGA...CCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTAACTGGGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENST00000368445.9 ENST00000368449.8 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| CDS-3UTR TCA 90 bp | GATCCCAGTTACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGACACTTTCAAAGCGGTaGTCCTTAGTCCGAACCACA | + |
|
Preference number: 4 (lower is better) Translates to: DPSYLTGLGEENAKSCKRTLSKR*SLVRTT Trigger: TGTGGTTCGGACTAAGGATCACCGCTTTGAAAGTGT...CCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTAACTGGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000368445.9 ENST00000368449.8 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| CDS-3UTR CCA 90 bp | TACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGGCTTGGAAATCTGCCTCAGGTCTCTaGTATAAAAGGTGCGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: YLTGLGEENAKSCKRAWKSASGL*YKRCDP Trigger: GGGATCGCACCTTTTATACCAGAGACCTGAGGCAGA...TTTCCAAGCCCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENST00000368445.9 ENST00000368449.8 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| CDS-3UTR CCA 90 bp | GTGAAGAGTCAAATAAGACCTCAGCCTCCAAGGTGGAAGAGGGTGAAACAGACACCTCAGCCTCCAAGGTaGAAGAGGGTGAAACAGACA | + |
|
Preference number: 4 (lower is better) Translates to: VKSQIRPQPPRWKRVKQTPQPPR*KRVKQT Trigger: TGTCTGTTTCACCCTCTTCCACCTTGGAGGCTGAGG...TGTCTGTTTCACCCTCTTCCACCTTGGAGGCTGAGGTCTTATTTGACTCTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444664.5 |
||
| CDS-3UTR CCA 90 bp | GTGAAGAGTCAAATAAGACCTCAGCCTCCAAGGTGGAAGAGGGTGAAACAGACATCCTTAGTCCGAACCTaGGAGGGTGGGAAGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VKSQIRPQPPRWKRVKQTSLVRT*EGGKEE Trigger: TTCTTCCTTCCCACCCTCCCAGGTTCGGACTAAGGA...TGTCTGTTTCACCCTCTTCCACCTTGGAGGCTGAGGTCTTATTTGACTCTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444664.5 |
||
| CDS-3UTR TCA 90 bp | TACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGGCTTGGAAAACACTTTCAAAGCGGTaGTCCTTAGTCCGAACCACA | + |
|
Preference number: 4 (lower is better) Translates to: YLTGLGEENAKSCKRAWKTLSKR*SLVRTT Trigger: TGTGGTTCGGACTAAGGATCACCGCTTTGAAAGTGT...TTTCCAAGCCCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENST00000368445.9 ENST00000368449.8 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| CDS-3UTR TCA 90 bp | GTGAAGAGTCAAATAAGACCTCAGCCTCCAAGGTGGAAGAGGGTGAAACAGACAACACTTTCAAAGCGGTaGTCCTTAGTCCGAACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VKSQIRPQPPRWKRVKQTTLSKR*SLVRTW Trigger: CCAGGTTCGGACTAAGGATCACCGCTTTGAAAGTGT...TGTCTGTTTCACCCTCTTCCACCTTGGAGGCTGAGGTCTTATTTGACTCTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444664.5 |
||
| CDS-3UTR GCA 90 bp | GATCCCAGTTACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGCTCTGGTATAAAAGGTaGGATCCCAGTTACCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: DPSYLTGLGEENAKSCKRLWYKR*DPSYLT Trigger: TGTGAGGTAACTGGGATCGCACCTTTTATACCAGAG...CCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTAACTGGGATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENST00000368445.9 ENST00000368449.8 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| CDS-3UTR CCA 90 bp | GTGAAGAGTCAAATAAGACCTCAGCCTCCAAGGTGGAAGAGGGTGAAACAGACAAGTTCAAGAACAGCTTaGGCAACATGGCGAAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: VKSQIRPQPPRWKRVKQTSSRTA*ATWRNP Trigger: GGGGTTTCGCCATGTTGCCCAAGCTGTTCTTGAACT...TGTCTGTTTCACCCTCTTCCACCTTGGAGGCTGAGGTCTTATTTGACTCTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444664.5 |
||
| CDS-3UTR CCA 90 bp | GTGAAGAGTCAAATAAGACCTCAGCCTCCAAGGTGGAAGAGGGTGAAACAGACAACCCCTTTCTTGACCTaGAGGAAGTTGGCATGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VKSQIRPQPPRWKRVKQTTPFLT*RKLACL Trigger: GAGACATGCCAACTTCCTCCAGGTCAAGAAAGGGGT...TGTCTGTTTCACCCTCTTCCACCTTGGAGGCTGAGGTCTTATTTGACTCTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444664.5 |
||
| CDS-3UTR GCA 90 bp | TACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGGCTTGGAAACTCTGGTATAAAAGGTaGGATCCCAGTTACCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: YLTGLGEENAKSCKRAWKLWYKR*DPSYLT Trigger: TGTGAGGTAACTGGGATCGCACCTTTTATACCAGAG...TTTCCAAGCCCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENST00000368445.9 ENST00000368449.8 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| CDS-3UTR TCA 90 bp | GTGAAGAGTCAAATAAGACCTCAGCCTCCAAGGTGGAAGAGGGTGAAACAGACATATATACCCCTTTCTTaGCCTGGAGGAAGTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VKSQIRPQPPRWKRVKQTYIPLS*PGGSWH Trigger: ATGCCAACTTCCTCCAGGTCAAGAAAGGGGTATATA...TGTCTGTTTCACCCTCTTCCACCTTGGAGGCTGAGGTCTTATTTGACTCTTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444664.5 |
||
| CDS-3UTR TCA 90 bp | GTGAAGAGTCAAATAAGACCTCAGCCTCCAAGGTGGAAGAGGGTGAAACAGACAGTCAATCCTGATCATTaGGGCTTCTCTAGAAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VKSQIRPQPPRWKRVKQTVNPDH*GFSRKR Trigger: TCTCTTTCTAGAGAAGCCTCAATGATCAGGATTGAC...TGTCTGTTTCACCCTCTTCCACCTTGGAGGCTGAGGTCTTATTTGACTCTTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444664.5 |
||
| CDS-3UTR CAA 90 bp | GATCCCAGTTACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGGCACCGCGGGCCGATTaGGTGCCGGATCACGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: DPSYLTGLGEENAKSCKRAPRAD*VPDHAT Trigger: AGTGGCGTGATCCGGCACCAAATCGGCCCGCGGTGC...CCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTAACTGGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368450.5 ENST00000368453.8 |
||
| CDS-3UTR CAA 90 bp | TACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGGCTTGGAAAGCACCGCGGGCCGATTaGGTGCCGGATCACGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: YLTGLGEENAKSCKRAWKAPRAD*VPDHAT Trigger: AGTGGCGTGATCCGGCACCAAATCGGCCCGCGGTGC...TTTCCAAGCCCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000368450.5 ENST00000368453.8 |
||
| CDS-3UTR CAA 90 bp | GATCCCAGTTACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGCCCATGACTTTGTCGTaGGGATGCAGCCAGCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: DPSYLTGLGEENAKSCKRPMTLS*GCSQPR Trigger: GCGGGGCTGGCTGCATCCCAACGACAAAGTCATGGG...CCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTAACTGGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000368445.9 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| CDS-3UTR CAA 90 bp | TACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGGCTTGGAAACCCATGACTTTGTCGTaGGGATGCAGCCAGCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: YLTGLGEENAKSCKRAWKPMTLS*GCSQPR Trigger: GCGGGGCTGGCTGCATCCCAACGACAAAGTCATGGG...TTTCCAAGCCCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000368445.9 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| CDS-3UTR CAA 90 bp | GATCCCAGTTACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGTTGGCGATGATCTGTTaGCAGTCTGCGGCCATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: DPSYLTGLGEENAKSCKRLAMIC*QSAAMR Trigger: CCTCATGGCCGCAGACTGCAAACAGATCATCGCCAA...CCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTAACTGGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000368445.9 ENST00000368449.8 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| CDS-3UTR CAA 90 bp | GTGAAGAGTCAAATAAGACCTCAGCCTCCAAGGTGGAAGAGGGTGAAACAGACAAGGGAGGCGGATCACTaGAGCCCGGGAGTTCAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VKSQIRPQPPRWKRVKQTREADH*SPGVQE Trigger: TTCTTGAACTCCCGGGCTCAAGTGATCCGCCTCCCT...TGTCTGTTTCACCCTCTTCCACCTTGGAGGCTGAGGTCTTATTTGACTCTTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000444664.5 |
||
| CDS-3UTR CAA 90 bp | GATCCCAGTTACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGTGGGTTCCTGAGGTATaGTTTGAAGCGCAACTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: DPSYLTGLGEENAKSCKRWVPEV*FEAQLE Trigger: TTCGAGTTGCGCTTCAAACAATACCTCAGGAACCCA...CCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTAACTGGGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000368445.9 ENST00000368449.8 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| CDS-3UTR CAA 90 bp | TACCTCACAGGCCTAGGCGAGGAAAATGCCAAGAGCTGTAAAAGGGCTTGGAAATGGGTTCCTGAGGTATaGTTTGAAGCGCAACTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: YLTGLGEENAKSCKRAWKWVPEV*FEAQLE Trigger: TTCGAGTTGCGCTTCAAACAATACCTCAGGAACCCA...TTTCCAAGCCCTTTTACAGCTCTTGGCATTTTCCTCGCCTAGGCCTGTGAGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000368445.9 ENST00000368449.8 ENST00000368450.5 ENST00000368453.8 ENST00000448116.7 |
||
| CDS-3UTR CAA 90 bp | GTGAAGAGTCAAATAAGACCTCAGCCTCCAAGGTGGAAGAGGGTGAAACAGACACTATATACCCCTTTCTaGACCTGGAGGAAGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VKSQIRPQPPRWKRVKQTLYTPF*TWRKLA Trigger: TGCCAACTTCCTCCAGGTCAAGAAAGGGGTATATAG...TGTCTGTTTCACCCTCTTCCACCTTGGAGGCTGAGGTCTTATTTGACTCTTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000444664.5 |
||