RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SH2D2A (Homo sapiens)

Ensembl gene IDs: ENSG00000027869

Ensembl transcript IDs: ENST00000368198.7, ENST00000368199.8, ENST00000392306.2, ENST00000468744.5, ENST00000486350.1, ENST00000495306.1

Found 224 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTaGTTCTCTGACCTCCAGGCTTCTTTGTTGGGGGTCAGGCCAGAC +
Preference number: 1 (lower is better)
Translates to: HWILGIFLGGSRLRI*FSDLQASLLGVRPD
Trigger: GTCTGGCCTGACCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
3UTR CCA 90 bp CTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATTaGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTGC +
Preference number: 1 (lower is better)
Translates to: LAHFFAVLDHQGLSH*ILGIFLGGSRLRIC
Trigger: GCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
3UTR-3UTR GCA 90 bp CAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCAAGCAGGCTCCGCATTTaGTTCTCTGACCTCCAGGCT +
Preference number: 2 (lower is better)
Translates to: QGPPCTLLCCLRSPRTEPSRLRI*FSDLQA
Trigger: AGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCT...TGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
3UTR-3UTR GCA 90 bp GTGGGAGCTAACAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAAGCAGGCTCCGCATTTaGTTCTCTGACCTCCAGGCT +
Preference number: 2 (lower is better)
Translates to: VGANRALLAHFFAVLDHQSRLRI*FSDLQA
Trigger: AGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCT...TTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTGTTAGCTCCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
3UTR CAA 90 bp CCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATaGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTG +
Preference number: 2 (lower is better)
Translates to: PCTLLCCLRSPRTEP*DSWDLLRREQAPHL
Trigger: CAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
3UTR-3UTR CCA 90 bp GTGGGAGCTAACAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGAGCCATTGGATTCTTaGGATCTTCTTAGGAGGGAG +
Preference number: 2 (lower is better)
Translates to: VGANRALLAHFFAVLDHQEPLDS*DLLRRE
Trigger: CTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTC...TTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTGTTAGCTCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
3UTR-3UTR GCA 90 bp CCAGACAAGAATCAACAAACAAGTTCTAACATCTGTTCTCACCAAACCATTCCTCCTTGCACACTTCTTTaGTGTCTTAGATCACCAAGG +
Preference number: 2 (lower is better)
Translates to: PDKNQQTSSNICSHQTIPPCTLL*CLRSPR
Trigger: CCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGG...AGGAATGGTTTGGTGAGAACAGATGTTAGAACTTGTTTGTTGATTCTTGTCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
3UTR-3UTR CCA 90 bp CCAGACAAGAATCAACAAACAAGTTCTAACATCTGTTCTCACCAAACCATTCCTCAAGGACTGAGCCATTaGATTCTTGGGATCTTCTTA +
Preference number: 2 (lower is better)
Translates to: PDKNQQTSSNICSHQTIPQGLSH*ILGIFL
Trigger: TAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTG...AGGAATGGTTTGGTGAGAACAGATGTTAGAACTTGTTTGTTGATTCTTGTCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
3UTR-3UTR CAA 90 bp GGGCCCAGACTCAAAAGGCTCAGAGGGCCAAGGAAATTAGACTCCAGGAGGAGACTCCAGGCTTCTTTGTaGGGGGTCAGGCCAGACCGC +
Preference number: 3 (lower is better)
Translates to: GPRLKRLRGPRKLDSRRRLQASL*GVRPDR
Trigger: GCGGTCTGGCCTGACCCCCAACAAAGAAGCCTGGAG...TCTCCTCCTGGAGTCTAATTTCCTTGGCCCTCTGAGCCTTTTGAGTCTGGGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
3UTR-3UTR CAA 90 bp GGAGCTAACAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTCCAGGCTTCTTTGTaGGGGGTCAGGCCAGACCGC +
Preference number: 3 (lower is better)
Translates to: GANRALLAHFFAVLDHQGLQASL*GVRPDR
Trigger: GCGGTCTGGCCTGACCCCCAACAAAGAAGCCTGGAG...TCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTGTTAGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
3UTR-3UTR CAA 90 bp CCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCCTCCAGGCTTCTTTGTaGGGGGTCAGGCCAGACCGC +
Preference number: 3 (lower is better)
Translates to: PLDSWDLLRREQAPHLLLLQASL*GVRPDR
Trigger: GCGGTCTGGCCTGACCCCCAACAAAGAAGCCTGGAG...GAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
3UTR-3UTR CAA 90 bp GCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATTGGGACCTCCAGGCTTCTTaGTTGGGGGTCAGGCCAGAC +
Preference number: 3 (lower is better)
Translates to: ALLAHFFAVLDHQGLSHWDLQAS*LGVRPD
Trigger: GTCTGGCCTGACCCCCAACAAAGAAGCCTGGAGGTC...CCAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
3UTR-3UTR CAA 90 bp GTGGGAGCTAACAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGACCTCCAGGCTTCTTaGTTGGGGGTCAGGCCAGAC +
Preference number: 3 (lower is better)
Translates to: VGANRALLAHFFAVLDHQDLQAS*LGVRPD
Trigger: GTCTGGCCTGACCCCCAACAAAGAAGCCTGGAGGTC...TTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTGTTAGCTCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
3UTR GCA 72 bp CTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTaGTTCTCTGACCTCCAGGCTTCTTTGTTGGGGGTC +
Preference number: 3 (lower is better)
Translates to: LGIFLGGSRLRI*FSDLQASLLGV
Trigger: GACCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
3UTR-3UTR CAA 90 bp GGGCCCAGACTCAAAAGGCTCAGAGGGCCAAGGAAATTAGACTCCAGGAGGAGACTAACAGGGCCCTCCTaGCACACTTCTTTGCTGTCT +
Preference number: 3 (lower is better)
Translates to: GPRLKRLRGPRKLDSRRRLTGPS*HTSLLS
Trigger: AGACAGCAAAGAAGTGTGCAAGGAGGGCCCTGTTAG...TCTCCTCCTGGAGTCTAATTTCCTTGGCCCTCTGAGCCTTTTGAGTCTGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
3UTR CCA 72 bp TGTCTTAGATCACCAAGGACTGAGCCATTGGATTCTTaGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTG +
Preference number: 3 (lower is better)
Translates to: CLRSPRTEPLDS*DLLRREQAPHL
Trigger: CAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTGATCTAAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
3UTR CCA 72 bp TTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATTaGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTC +
Preference number: 3 (lower is better)
Translates to: FFAVLDHQGLSH*ILGIFLGGSRL
Trigger: GAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp GAGGGAGCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTGGGGGTGCAGCAGCAGGTCCTaGAGCCGCGCGTGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: EGAGSAFASLTSRLLCWGCSSRS*SRAWAL
Trigger: CAGCGCCCACGCGCGGCTGCAGGACCTGCTGCTGCA...CCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GAGGGAGCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTGGGGGTCGCCCAGCACCACGTaGCGCCCGTCCCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: EGAGSAFASLTSRLLCWGSPSTT*RPSLSW
Trigger: CCAGCTCAGGGACGGGCGCCACGTGGTGCTGGGCGA...CCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR TCA 90 bp GCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTGGGGGTCAGGCTCTCCCCGTAGGGGCTaGGCGGGTGCGCGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: AGSAFASLTSRLLCWGSGSPRRG*AGARCS
Trigger: ACTACACCGCGCACCCGCTCAGCCCCTACGGGGAGA...GCCTGACCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR TCA 90 bp GCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTGGGGGTCAGGCGGCCAGACCGCCTACTaGGGAGGCCCAAGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: AGSAFASLTSRLLCWGSGGQTAY*GGPRGS
Trigger: GCTTCCCCTTGGGCCTCCTCAGTAGGCGGTCTGGCC...GCCTGACCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp GGGCCCAGACTCAAAAGGCTCAGAGGGCCAAGGAAATTAGACTCCAGGAGGAGAGCAGGGGCTGCCCCGTaGTGCAGGAGCCAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GPRLKRLRGPRKLDSRRRAGAAP*CRSQWA
Trigger: GGCCCACTGGCTCCTGCAGCACGGGGCAGCCCCTGC...TCTCCTCCTGGAGTCTAATTTCCTTGGCCCTCTGAGCCTTTTGAGTCTGGGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp GGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTGCAGCAGCAGGTCCTaGAGCCGCGCGTGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: GIFLGGSRLRICFSDLQACSSRS*SRAWAL
Trigger: CAGCGCCCACGCGCGGCTGCAGGACCTGCTGCTGCA...AGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTCGCCCGTCCCTGAGCTaGGCCAGCAGGAAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: GIFLGGSRLRICFSDLQARPSLS*ASRKWR
Trigger: CCGCCACTTCCTGCTGGCCCAGCTCAGGGACGGGCG...AGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR TCA 90 bp CCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGTCTCCCCGTAGGGGCTaGGCGGGTGCGCGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: PRTEPLDSWDLLRREQAPSPRRG*AGARCS
Trigger: ACTACACCGCGCACCCGCTCAGCCCCTACGGGGAGA...CGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR TCA 90 bp GAGGGAGCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTGGGGGACTTCTGGGGGCAGCTaGGGTTTGGCGGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: EGAGSAFASLTSRLLCWGTSGGS*GLAGMG
Trigger: TCCCATCCCCGCCAAACCTCAGCTGCCCCCAGAAGT...CCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp GAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTGCAGGGGCTGCCCCGTaGTGCAGGAGCCAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: EPLDSWDLLRREQAPHLLAGAAP*CRSQWA
Trigger: GGCCCACTGGCTCCTGCAGCACGGGGCAGCCCCTGC...AAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp GGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATTGGCAGGGGCTGCCCCGTaGTGCAGGAGCCAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: GPPCTLLCCLRSPRTEPLAGAAP*CRSQWA
Trigger: GGCCCACTGGCTCCTGCAGCACGGGGCAGCCCCTGC...CAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTGGGGGTCAGGCTCTCTCCTCTCACCCTaGCCCCGGGGGCAGGAAATG +
Preference number: 4 (lower is better)
Translates to: AGSAFASLTSRLLCWGSGSLLSP*PRGQEM
Trigger: CATTTCCTGCCCCCGGGGCCAGGGTGAGAGGAGAGA...GCCTGACCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GAGGGAGCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTGGGGGTGGGCCTGGGTCTTCTaGAACCAAGCCCGGGTCTCG +
Preference number: 4 (lower is better)
Translates to: EGAGSAFASLTSRLLCWGWAWVF*NQARVS
Trigger: CGAGACCCGGGCTTGGTTCCAGAAGACCCAGGCCCA...CCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTCGCCCGTCCCTGAGCTaGGCCAGCAGGAAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: GLSHWILGIFLGGSRLRIRPSLS*ASRKWR
Trigger: CCGCCACTTCCTGCTGGCCCAGCTCAGGGACGGGCG...AATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTCGCCCAGCACCACGTaGCGCCCGTCCCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GLSHWILGIFLGGSRLRISPSTT*RPSLSW
Trigger: CCAGCTCAGGGACGGGCGCCACGTGGTGCTGGGCGA...AATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GTGGGAGCTAACAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAATCCTGCAGCCGCGCGTaGGCGCTGTCCTCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: VGANRALLAHFFAVLDHQSCSRA*ALSSPS
Trigger: GCTGGGCGAGGACAGCGCCCACGCGCGGCTGCAGGA...TTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTGTTAGCTCCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATTGTCCTGCAGCCGCGCGTaGGCGCTGTCCTCGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GPPCTLLCCLRSPRTEPLSCSRA*ALSSPS
Trigger: GCTGGGCGAGGACAGCGCCCACGCGCGGCTGCAGGA...CAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTTGGGCCTGAGCAGCTaGGAGGGCTCCTTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: GIFLGGSRLRICFSDLQALGLSS*EGSFSP
Trigger: CGGGGAGAAGGAGCCCTCCCAGCTGCTCAGGCCCAA...AGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR TCA 90 bp CACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCTCTCCCCGTAGGGGCTaGGCGGGTGCGCGGTGTAGT +
Preference number: 4 (lower is better)
Translates to: HQGLSHWILGIFLGGSRLSPRRG*AGARCS
Trigger: ACTACACCGCGCACCCGCTCAGCCCCTACGGGGAGA...GAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR TCA 90 bp CAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCACTGCCTCCCTGTGGGTaGCGGAGAGAGGGGGCCGAA +
Preference number: 4 (lower is better)
Translates to: QGPPCTLLCCLRSPRTEPLPPCG*RREGAE
Trigger: TTCGGCCCCCTCTCTCCGTCACCCACAGGGAGGCAG...TGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392306.2
CDS-3UTR CCA 90 bp GCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATTGGCGCCCGTCCCTGAGCTaGGCCAGCAGGAAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: ALLAHFFAVLDHQGLSHWRPSLS*ASRKWR
Trigger: CCGCCACTTCCTGCTGGCCCAGCTCAGGGACGGGCG...CCAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATTGTCGCCCAGCACCACGTaGCGCCCGTCCCTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GPPCTLLCCLRSPRTEPLSPSTT*RPSLSW
Trigger: CCAGCTCAGGGACGGGCGCCACGTGGTGCTGGGCGA...CAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp CCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGTTGGGCCTGAGCAGCTaGGAGGGCTCCTTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: PRTEPLDSWDLLRREQAPLGLSS*EGSFSP
Trigger: CGGGGAGAAGGAGCCCTCCCAGCTGCTCAGGCCCAA...CGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GAGGGAGCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTGGGGGGGCCGGGCGGTGTCGTaGAACAGGGATTGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: EGAGSAFASLTSRLLCWGGRAVS*NRDCVD
Trigger: GTCTACACAATCCCTGTTCCACGACACCGCCCGGCC...CCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp CCAGGGCCCAGACTCAAAAGGCTCAGAGGGCCAAGGAAATTAGACTCCAGGAGGCAGGGTGCCCAAGGGTaGCGGGTAGGCCCTCATCTT +
Preference number: 4 (lower is better)
Translates to: PGPRLKRLRGPRKLDSRRQGAQG*RVGPHL
Trigger: AAGATGAGGGCCTACCCGCCACCCTTGGGCACCCTG...CCTCCTGGAGTCTAATTTCCTTGGCCCTCTGAGCCTTTTGAGTCTGGGCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTGGGGGTCAGGCGAGCCACCTGTATTCTaGCCTCCTGGGACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: AGSAFASLTSRLLCWGSGEPPVF*PPGTGL
Trigger: CAGGCCTGTCCCAGGAGGCCAGAATACAGGTGGCTC...GCCTGACCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR TCA 90 bp CCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGTCACCGCGCTCTCGCTaGACCGCACCAAGTAGCACC +
Preference number: 4 (lower is better)
Translates to: PRTEPLDSWDLLRREQAPSPRSR*TAPSST
Trigger: GGTGCTACTTGGTGCGGTTCAGCGAGAGCGCGGTGA...CGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR TCA 90 bp CCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCGGCCAGACCGCCTACTaGGGAGGCCCAAGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PLDSWDLLRREQAPHLLLGQTAY*GGPRGS
Trigger: GCTTCCCCTTGGGCCTCCTCAGTAGGCGGTCTGGCC...GAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp CCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGTCTCTCCTCTCACCCTaGCCCCGGGGGCAGGAAATG +
Preference number: 4 (lower is better)
Translates to: PRTEPLDSWDLLRREQAPSLLSP*PRGQEM
Trigger: CATTTCCTGCCCCCGGGGCCAGGGTGAGAGGAGAGA...CGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp CCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCAGCATTCCCTGTGTTaGAGGCAGCCTCCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: PRTEPLDSWDLLRREQAPQHSLC*RQPPGP
Trigger: AGGCCCCGGAGGCTGCCTCCAACACAGGGAATGCTG...CGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp TTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTGGGCCTGAGCAGCTaGGAGGGCTCCTTCTCCCCG +
Preference number: 4 (lower is better)
Translates to: FLGGSRLRICFSDLQASLLGLSS*EGSFSP
Trigger: CGGGGAGAAGGAGCCCTCCCAGCTGCTCAGGCCCAA...CAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp CAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCAGGGGCAGCTGAGGTTTaGCGGGGATGGGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: QGPPCTLLCCLRSPRTEPGAAEV*RGWEAW
Trigger: CCAAGCCTCCCATCCCCGCCAAACCTCAGCTGCCCC...TGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTGGGGGTCAGGCGGCTGCCCCGGCCCATaGCATAGAAAGCTATGGGTT +
Preference number: 4 (lower is better)
Translates to: AGSAFASLTSRLLCWGSGGCPGP*HRKLWV
Trigger: AACCCATAGCTTTCTATGCCATGGGCCGGGGCAGCC...GCCTGACCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp CCAGGGCCCAGACTCAAAAGGCTCAGAGGGCCAAGGAAATTAGACTCCAGGAGGCCACATAGATGTTGCTaGGGGCTTCCCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PGPRLKRLRGPRKLDSRRPHRCC*GLPQGC
Trigger: GCAGCCCTGGGGAAGCCCCCAGCAACATCTATGTGG...CCTCCTGGAGTCTAATTTCCTTGGCCCTCTGAGCCTTTTGAGTCTGGGCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTCCACATAGATGTTGCTaGGGGCTTCCCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GIFLGGSRLRICFSDLQAPHRCC*GLPQGC
Trigger: GCAGCCCTGGGGAAGCCCCCAGCAACATCTATGTGG...AGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTGGGGGTCAGGCCCTTGGGGACATATCTaGGCCAGGGGGAACTCCATG +
Preference number: 4 (lower is better)
Translates to: AGSAFASLTSRLLCWGSGPWGHI*ARGNSM
Trigger: CATGGAGTTCCCCCTGGCCCAGATATGTCCCCAAGG...GCCTGACCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp CACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCTCTCTGCCTCCCTGTaGGTGACGGAGAGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: HQGLSHWILGIFLGGSRLLSASL*VTERGG
Trigger: GCCCCCTCTCTCCGTCACCCACAGGGAGGCAGAGAG...GAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000392306.2
CDS-3UTR TCA 90 bp CAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCACCAGGGGGAACTCCATaGGGGCAGCCTCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: QGPPCTLLCCLRSPRTEPPGGTP*GQPHKG
Trigger: TCCCTTGTGAGGCTGCCCTCATGGAGTTCCCCCTGG...TGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR TCA 90 bp GGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTACTTCTGGGGGCAGCTaGGGTTTGGCGGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: GLSHWILGIFLGGSRLRITSGGS*GLAGMG
Trigger: TCCCATCCCCGCCAAACCTCAGCTGCCCCCAGAAGT...AATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp GGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTTCCGTAGGACAGGGTaGCCAAGGGTGGCGGGTAGG +
Preference number: 4 (lower is better)
Translates to: GLSHWILGIFLGGSRLRIFRRTG*PRVAGR
Trigger: CCTACCCGCCACCCTTGGGCACCCTGTCCTACGGAA...AATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp CCAGGGCCCAGACTCAAAAGGCTCAGAGGGCCAAGGAAATTAGACTCCAGGAGGGGCAGGGGAGGGCCTTaGCCAATCACAGAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: PGPRLKRLRGPRKLDSRRGRGGP*PITEFS
Trigger: TGAGAACTCTGTGATTGGGCAAGGCCCTCCCCTGCC...CCTCCTGGAGTCTAATTTCCTTGGCCCTCTGAGCCTTTTGAGTCTGGGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp CCAGGGCCCAGACTCAAAAGGCTCAGAGGGCCAAGGAAATTAGACTCCAGGAGGCCCAAGGGGAAGCCATaGCTGTCCTCTGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: PGPRLKRLRGPRKLDSRRPKGKP*LSSVLK
Trigger: CTTCAGGACAGAGGACAGGCATGGCTTCCCCTTGGG...CCTCCTGGAGTCTAATTTCCTTGGCCCTCTGAGCCTTTTGAGTCTGGGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp TTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTCTCTCCTCTCACCCTaGCCCCGGGGGCAGGAAATG +
Preference number: 4 (lower is better)
Translates to: FLGGSRLRICFSDLQASLSLLSP*PRGQEM
Trigger: CATTTCCTGCCCCCGGGGCCAGGGTGAGAGGAGAGA...CAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp TTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGCAGCATTCCCTGTGTTaGAGGCAGCCTCCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: FLGGSRLRICFSDLQASLQHSLC*RQPPGP
Trigger: AGGCCCCGGAGGCTGCCTCCAACACAGGGAATGCTG...CAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTCAGCATTCCCTGTGTTaGAGGCAGCCTCCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GLSHWILGIFLGGSRLRIQHSLC*RQPPGP
Trigger: AGGCCCCGGAGGCTGCCTCCAACACAGGGAATGCTG...AATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp CAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATGGGCCTGGGTCTTCTaGAACCAAGCCCGGGTCTCG +
Preference number: 4 (lower is better)
Translates to: QGPPCTLLCCLRSPRTEPWAWVF*NQARVS
Trigger: CGAGACCCGGGCTTGGTTCCAGAAGACCCAGGCCCA...TGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp CACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCTGGGCCTGGGTCTTCTaGAACCAAGCCCGGGTCTCG +
Preference number: 4 (lower is better)
Translates to: HQGLSHWILGIFLGGSRLWAWVF*NQARVS
Trigger: CGAGACCCGGGCTTGGTTCCAGAAGACCCAGGCCCA...GAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATTGTGGGCCAGCAGGAAGTaGCGGCAGCAAGTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: GPPCTLLCCLRSPRTEPLWASRK*RQQVRL
Trigger: GAGCCGGACTTGCTGCCGCCACTTCCTGCTGGCCCA...CAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp CCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCTGGGCCAGCAGGAAGTaGCGGCAGCAAGTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: PLDSWDLLRREQAPHLLLWASRK*RQQVRL
Trigger: GAGCCGGACTTGCTGCCGCCACTTCCTGCTGGCCCA...GAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTGGGGCAGCTGAGGTTTaGCGGGGATGGGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: EPLDSWDLLRREQAPHLLGAAEV*RGWEAW
Trigger: CCAAGCCTCCCATCCCCGCCAAACCTCAGCTGCCCC...AAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTCAGGGTGCCCAAGGGTaGCGGGTAGGCCCTCATCTT +
Preference number: 4 (lower is better)
Translates to: GLSHWILGIFLGGSRLRIQGAQG*RVGPHL
Trigger: AAGATGAGGGCCTACCCGCCACCCTTGGGCACCCTG...AATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTCCTTGGGGACATATCTaGGCCAGGGGGAACTCCATG +
Preference number: 4 (lower is better)
Translates to: GIFLGGSRLRICFSDLQAPWGHI*ARGNSM
Trigger: CATGGAGTTCCCCCTGGCCCAGATATGTCCCCAAGG...AGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368199.8
ENST00000392306.2
CDS-3UTR TCA 90 bp GGAGCTAACAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACCAGGGGGAACTCCATaGGGGCAGCCTCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: GANRALLAHFFAVLDHQGPGGTP*GQPHKG
Trigger: TCCCTTGTGAGGCTGCCCTCATGGAGTTCCCCCTGG...TCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTGTTAGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR TCA 90 bp GGAGCTAACAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGAACTTCTGGGGGCAGCTaGGGTTTGGCGGGGATGGGA +
Preference number: 4 (lower is better)
Translates to: GANRALLAHFFAVLDHQGTSGGS*GLAGMG
Trigger: TCCCATCCCCGCCAAACCTCAGCTGCCCCCAGAAGT...TCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTGTTAGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR TCA 90 bp CAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCAGGGATGGGGGCTTCGTaGCTCCCTTGGGGACATATC +
Preference number: 4 (lower is better)
Translates to: QGPPCTLLCCLRSPRTEPGMGAS*LPWGHI
Trigger: GATATGTCCCCAAGGGAGTCACGAAGCCCCCATCCC...TGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp CCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGTCCAGGCACCTCCTCTaGCCTCTCAGCATTCCCTGT +
Preference number: 4 (lower is better)
Translates to: PRTEPLDSWDLLRREQAPSRHLL*PLSIPC
Trigger: ACAGGGAATGCTGAGAGGGCAGAGGAGGTGCCTGGA...CGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp ACAGTGGGAGCTAACAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACGCCCGGGTCTCGGCCTaGAGGAACAGGCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: TVGANRALLAHFFAVLDHARVSA*RNRLPS
Trigger: AGAAGGAAGCCTGTTCCTGCAGGCCGAGACCCGGGC...GTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTGTTAGCTCCCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp AGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATCTCCAGCAGCCTCTCTaGCTCCCTCCGGGTGATGAA +
Preference number: 4 (lower is better)
Translates to: RTEPLDSWDLLRREQAPHLQQPL*LPPGDE
Trigger: TTCATCACCCGGAGGGAGGCAGAGAGGCTGCTGGAG...ATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368198.7
ENST00000368199.8
CDS-3UTR GCA 90 bp TGTCTTAGATCACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGTGCAGCAGCAGGTCCTaGAGCCGCGCGTGGGCGCTG +
Preference number: 4 (lower is better)
Translates to: CLRSPRTEPLDSWDLLRRCSSRS*SRAWAL
Trigger: CAGCGCCCACGCGCGGCTGCAGGACCTGCTGCTGCA...CCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTGATCTAAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTGGGGGTCAGGCATGATTGGGCTGTACTaGGGGTTTGGGTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: AGSAFASLTSRLLCWGSGMIGLY*GFGSWL
Trigger: AAGCCAGGACCCAAACCCCCAGTACAGCCCAATCAT...GCCTGACCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTGGGGGTCAGGCTTTCTGCATCGGGACTaGGGCTTGCCCCTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: AGSAFASLTSRLLCWGSGFLHRD*GLPLFD
Trigger: ATCAAACAGGGGCAAGCCCCAGTCCCGATGCAGAAA...GCCTGACCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp TTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGGGCCGGGCGGTGTCGTaGAACAGGGATTGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: FLGGSRLRICFSDLQASLGRAVS*NRDCVD
Trigger: GTCTACACAATCCCTGTTCCACGACACCGCCCGGCC...CAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GGGCCCAGACTCAAAAGGCTCAGAGGGCCAAGGAAATTAGACTCCAGGAGGAGAGGCTGCCCCGGCCCATaGCATAGAAAGCTATGGGTT +
Preference number: 4 (lower is better)
Translates to: GPRLKRLRGPRKLDSRRRGCPGP*HRKLWV
Trigger: AACCCATAGCTTTCTATGCCATGGGCCGGGGCAGCC...TCTCCTCCTGGAGTCTAATTTCCTTGGCCCTCTGAGCCTTTTGAGTCTGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTCTCCTGGGACAGGCCTaGACCAGCTCTTCCGTAGGA +
Preference number: 4 (lower is better)
Translates to: GLSHWILGIFLGGSRLRILLGQA*TSSSVG
Trigger: TCCTACGGAAGAGCTGGTCCAGGCCTGTCCCAGGAG...AATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp TTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGCTCCTGGGACAGGCCTaGACCAGCTCTTCCGTAGGA +
Preference number: 4 (lower is better)
Translates to: FLGGSRLRICFSDLQASLLLGQA*TSSSVG
Trigger: TCCTACGGAAGAGCTGGTCCAGGCCTGTCCCAGGAG...CAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTGGGGGTCAGGCAGACAACAGCAGCATTaGACCAGGGCCCAGACTCAA +
Preference number: 4 (lower is better)
Translates to: AGSAFASLTSRLLCWGSGRQQQH*TRAQTQ
Trigger: TTGAGTCTGGGCCCTGGTCCAATGCTGCTGTTGTCT...GCCTGACCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR TCA 90 bp CAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATGCGGGTCATGTCTGTaGTCTGGAAGGTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: QGPPCTLLCCLRSPRTEPCGSCL*SGRCLG
Trigger: CCCCAAGCACCTTCCAGATCACAGACATGACCCGCA...TGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368198.7
CDS-3UTR TCA 90 bp TGTCTTAGATCACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGGCCAGACCGCCTACTaGGGAGGCCCAAGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: CLRSPRTEPLDSWDLLRRGQTAY*GGPRGS
Trigger: GCTTCCCCTTGGGCCTCCTCAGTAGGCGGTCTGGCC...CCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTGATCTAAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR TCA 90 bp GGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATTGGGGATGGGGGCTTCGTaGCTCCCTTGGGGACATATC +
Preference number: 4 (lower is better)
Translates to: GPPCTLLCCLRSPRTEPLGMGAS*LPWGHI
Trigger: GATATGTCCCCAAGGGAGTCACGAAGCCCCCATCCC...CAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp GGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTCCTCAGGGAAAGTCCTaGAGGCTCAGGAGTCTGTCG +
Preference number: 4 (lower is better)
Translates to: GLSHWILGIFLGGSRLRIPQGKS*RLRSLS
Trigger: CGACAGACTCCTGAGCCTGCAGGACTTTCCCTGAGG...AATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp AGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATCCTCAGGGAAAGTCCTaGAGGCTCAGGAGTCTGTCG +
Preference number: 4 (lower is better)
Translates to: RTEPLDSWDLLRREQAPHPQGKS*RLRSLS
Trigger: CGACAGACTCCTGAGCCTGCAGGACTTTCCCTGAGG...ATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp CAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCACCTCAGGGAAAGTCCTaGAGGCTCAGGAGTCTGTCG +
Preference number: 4 (lower is better)
Translates to: QGPPCTLLCCLRSPRTEPPQGKS*RLRSLS
Trigger: CGACAGACTCCTGAGCCTGCAGGACTTTCCCTGAGG...TGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp CACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCTTCCACATAGATGTTaGTGGGGGCTTCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: HQGLSHWILGIFLGGSRLLPHRC*WGLPQG
Trigger: GCCCTGGGGAAGCCCCCAGCAACATCTATGTGGAAG...GAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp CACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCGCTTGGGGACATATCTaGGCCAGGGGGAACTCCATG +
Preference number: 4 (lower is better)
Translates to: HQGLSHWILGIFLGGSRLAWGHI*ARGNSM
Trigger: CATGGAGTTCCCCCTGGCCCAGATATGTCCCCAAGC...GAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368198.7
CDS-3UTR CCA 90 bp CCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGGCTGTACTGGGGGTTTaGGTCCTGGCTTTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: PRTEPLDSWDLLRREQAPAVLGV*VLAFAS
Trigger: GGAAGCAAAAGCCAGGACCCAAACCCCCAGTACAGC...CGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GGGCCCAGACTCAAAAGGCTCAGAGGGCCAAGGAAATTAGACTCCAGGAGGAGAGCTGTACTGGGGGTTTaGGTCCTGGCTTTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: GPRLKRLRGPRKLDSRRRAVLGV*VLAFAS
Trigger: GGAAGCAAAAGCCAGGACCCAAACCCCCAGTACAGC...TCTCCTCCTGGAGTCTAATTTCCTTGGCCCTCTGAGCCTTTTGAGTCTGGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTGATTGTGTAGACTTCTaGGGGCAGCTGAGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: GIFLGGSRLRICFSDLQADCVDF*GQLRFG
Trigger: GCCAAACCTCAGCTGCCCCCAGAAGTCTACACAATC...AGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATTGGGGCCGGGCGGTGTCGTaGAACAGGGATTGTGTAGAC +
Preference number: 4 (lower is better)
Translates to: ALLAHFFAVLDHQGLSHWGRAVS*NRDCVD
Trigger: GTCTACACAATCCCTGTTCCACGACACCGCCCGGCC...CCAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GGAGCTAACAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACCACATAGATGTTGCTaGGGGCTTCCCCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GANRALLAHFFAVLDHQGPHRCC*GLPQGC
Trigger: GCAGCCCTGGGGAAGCCCCCAGCAACATCTATGTGG...TCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTGTTAGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATTGCTCCTGGGACAGGCCTaGACCAGCTCTTCCGTAGGA +
Preference number: 4 (lower is better)
Translates to: GPPCTLLCCLRSPRTEPLLLGQA*TSSSVG
Trigger: TCCTACGGAAGAGCTGGTCCAGGCCTGTCCCAGGAG...CAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATTGGAGCCACCTGTATTCTaGCCTCCTGGGACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GPPCTLLCCLRSPRTEPLEPPVF*PPGTGL
Trigger: CAGGCCTGTCCCAGGAGGCCAGAATACAGGTGGCTC...CAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp AGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATGAGAAACCAGGACAGTaGGAGCTAACAGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: RTEPLDSWDLLRREQAPHEKPGQ*ELTGPS
Trigger: GGAGGGCCCTGTTAGCTCCCACTGTCCTGGTTTCTC...ATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR TCA 90 bp GGGCCCAGACTCAAAAGGCTCAGAGGGCCAAGGAAATTAGACTCCAGGAGGAGAGCCTGTCCTCTGTCCTaGAGCACCTGTCTAGAAAGA +
Preference number: 4 (lower is better)
Translates to: GPRLKRLRGPRKLDSRRRACPLS*STCLER
Trigger: TCTTTCTAGACAGGTGCTTCAGGACAGAGGACAGGC...TCTCCTCCTGGAGTCTAATTTCCTTGGCCCTCTGAGCCTTTTGAGTCTGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp GTGGGAGCTAACAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAATCCAGGCACCTCCTCTaGCCTCTCAGCATTCCCTGT +
Preference number: 4 (lower is better)
Translates to: VGANRALLAHFFAVLDHQSRHLL*PLSIPC
Trigger: ACAGGGAATGCTGAGAGGGCAGAGGAGGTGCCTGGA...TTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTGTTAGCTCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp AGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATATCGGGACTGGGGCTTaGCCCTGTTTGATGATTGGG +
Preference number: 4 (lower is better)
Translates to: RTEPLDSWDLLRREQAPHIGTGA*PCLMIG
Trigger: CCCAATCATCAAACAGGGGCAAGCCCCAGTCCCGAT...ATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp CCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCCTTCCACATAGATGTTaGTGGGGGCTTCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PLDSWDLLRREQAPHLLLLPHRC*WGLPQG
Trigger: GCCCTGGGGAAGCCCCCAGCAACATCTATGTGGAAG...GAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp GGAGCTAACAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTTCCACATAGATGTTaGTGGGGGCTTCCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GANRALLAHFFAVLDHQGLPHRC*WGLPQG
Trigger: GCCCTGGGGAAGCCCCCAGCAACATCTATGTGGAAG...TCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTGTTAGCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp CCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCGGCAGGGGAGGGCCTTaGCCAATCACAGAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: PLDSWDLLRREQAPHLLLGRGGP*PITEFS
Trigger: TGAGAACTCTGTGATTGGGCAAGGCCCTCCCCTGCC...GAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp GTGGGAGCTAACAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAACCCAAGGGGAAGCCATaGCTGTCCTCTGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: VGANRALLAHFFAVLDHQPKGKP*LSSVLK
Trigger: CTTCAGGACAGAGGACAGGCATGGCTTCCCCTTGGG...TTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTGTTAGCTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp CCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCCCCAAGGGGAAGCCATaGCTGTCCTCTGTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: PLDSWDLLRREQAPHLLLPKGKP*LSSVLK
Trigger: CTTCAGGACAGAGGACAGGCATGGCTTCCCCTTGGG...GAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp AGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATAGCAGGCTCCGCATTTaGTTCTCTGACCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: RTEPLDSWDLLRREQAPHSRLRI*FSDLQA
Trigger: AGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCT...ATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp AGATCACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGAGGAGCCAGTGGGCCTaGGTCTTCTGGAACCAAGCC +
Preference number: 4 (lower is better)
Translates to: RSPRTEPLDSWDLLRREQRSQWA*VFWNQA
Trigger: GGCTTGGTTCCAGAAGACCCAGGCCCACTGGCTCCT...CTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp TGTCTTAGATCACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGTGGGCCAGCAGGAAGTaGCGGCAGCAAGTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: CLRSPRTEPLDSWDLLRRWASRK*RQQVRL
Trigger: GAGCCGGACTTGCTGCCGCCACTTCCTGCTGGCCCA...CCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTGATCTAAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp CACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCGCTGTACTGGGGGTTTaGGTCCTGGCTTTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: HQGLSHWILGIFLGGSRLAVLGV*VLAFAS
Trigger: GGAAGCAAAAGCCAGGACCCAAACCCCCAGTACAGC...GAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp TGTCTTAGATCACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGGGGCAGCTGAGGTTTaGCGGGGATGGGAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: CLRSPRTEPLDSWDLLRRGAAEV*RGWEAW
Trigger: CCAAGCCTCCCATCCCCGCCAAACCTCAGCTGCCCC...CCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTGATCTAAGACA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp AGATCACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGAGCCACCTGTATTCTaGCCTCCTGGGACAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RSPRTEPLDSWDLLRREQEPPVF*PPGTGL
Trigger: CAGGCCTGTCCCAGGAGGCCAGAATACAGGTGGCTC...CTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTGATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp CCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCGAGAAACCAGGACAGTaGGAGCTAACAGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: PLDSWDLLRREQAPHLLLEKPGQ*ELTGPS
Trigger: GGAGGGCCCTGTTAGCTCCCACTGTCCTGGTTTCTC...GAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GGGCCCAGACTCAAAAGGCTCAGAGGGCCAAGGAAATTAGACTCCAGGAGGAGAAGACAACAGCAGCATTaGACCAGGGCCCAGACTCAA +
Preference number: 4 (lower is better)
Translates to: GPRLKRLRGPRKLDSRRRRQQQH*TRAQTQ
Trigger: TTGAGTCTGGGCCCTGGTCCAATGCTGCTGTTGTCT...TCTCCTCCTGGAGTCTAATTTCCTTGGCCCTCTGAGCCTTTTGAGTCTGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR TCA 90 bp TGTCTTAGATCACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGCCAGGGGGAACTCCATaGGGGCAGCCTCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: CLRSPRTEPLDSWDLLRRPGGTP*GQPHKG
Trigger: TCCCTTGTGAGGCTGCCCTCATGGAGTTCCCCCTGG...CCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTGATCTAAGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR TCA 90 bp GAGGGAGCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTGGGGGTTTGCTTCCAAAGTTTaGTTCTTCGGTCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: EGAGSAFASLTSRLLCWGFASKV*FFGPQG
Trigger: TCCCTGAGGACCGAAGAATCAAACTTTGGAAGCAAA...CCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp CCAGGGCCCAGACTCAAAAGGCTCAGAGGGCCAAGGAAATTAGACTCCAGGAGGTGTTCCGGAAAGGTGTaGACACTCAGCAACTCATCA +
Preference number: 4 (lower is better)
Translates to: PGPRLKRLRGPRKLDSRRCSGKV*TLSNSS
Trigger: TGATGAGTTGCTGAGTGTGCACACCTTTCCGGAACA...CCTCCTGGAGTCTAATTTCCTTGGCCCTCTGAGCCTTTTGAGTCTGGGCCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp TGTCTTAGATCACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGCCCGGGTCTCGGCCTaGAGGAACAGGCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: CLRSPRTEPLDSWDLLRRARVSA*RNRLPS
Trigger: AGAAGGAAGCCTGTTCCTGCAGGCCGAGACCCGGGC...CCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTGATCTAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp ACAGTGGGAGCTAACAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACATCGGGACTGGGGCTTaGCCCTGTTTGATGATTGGG +
Preference number: 4 (lower is better)
Translates to: TVGANRALLAHFFAVLDHIGTGA*PCLMIG
Trigger: CCCAATCATCAAACAGGGGCAAGCCCCAGTCCCGAT...GTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTGTTAGCTCCCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp CCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCATCGGGACTGGGGCTTaGCCCTGTTTGATGATTGGG +
Preference number: 4 (lower is better)
Translates to: PLDSWDLLRREQAPHLLLIGTGA*PCLMIG
Trigger: CCCAATCATCAAACAGGGGCAAGCCCCAGTCCCGAT...GAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp CCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCAGCAGGCTCCGCATTTaGTTCTCTGACCTCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PLDSWDLLRREQAPHLLLSRLRI*FSDLQA
Trigger: AGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCT...GAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATTGGGATCTGGAAGGTGCTTaGGGACATATCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: ALLAHFFAVLDHQGLSHWDLEGA*GHIWAR
Trigger: CCTGGCCCAGATATGTCCCCAAGCACCTTCCAGATC...CCAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368198.7
CDS-3UTR CCA 90 bp GGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTATGATTGGGCTGTACTaGGGGTTTGGGTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GLSHWILGIFLGGSRLRIMIGLY*GFGSWL
Trigger: AAGCCAGGACCCAAACCCCCAGTACAGCCCAATCAT...AATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp AGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATGATTGTGTAGACTTCTaGGGGCAGCTGAGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: RTEPLDSWDLLRREQAPHDCVDF*GQLRFG
Trigger: GCCAAACCTCAGCTGCCCCCAGAAGTCTACACAATC...ATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp TGTCTTAGATCACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGCAGGGTGCCCAAGGGTaGCGGGTAGGCCCTCATCTT +
Preference number: 4 (lower is better)
Translates to: CLRSPRTEPLDSWDLLRRQGAQG*RVGPHL
Trigger: AAGATGAGGGCCTACCCGCCACCCTTGGGCACCCTG...CCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTGATCTAAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GTGGGAGCTAACAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGAAGGTGCTGAAGGTTaGGATGGGGGCTTCGTGACT +
Preference number: 4 (lower is better)
Translates to: VGANRALLAHFFAVLDHQEGAEG*DGGFVT
Trigger: AGTCACGAAGCCCCCATCCCAACCTTCAGCACCTTC...TTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTGTTAGCTCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATTGGGAAGGTGCTGAAGGTTaGGATGGGGGCTTCGTGACT +
Preference number: 4 (lower is better)
Translates to: ALLAHFFAVLDHQGLSHWEGAEG*DGGFVT
Trigger: AGTCACGAAGCCCCCATCCCAACCTTCAGCACCTTC...CCAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368199.8
ENST00000392306.2
CDS-3UTR TCA 90 bp GGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATTGGCCTGTCCTCTGTCCTaGAGCACCTGTCTAGAAAGA +
Preference number: 4 (lower is better)
Translates to: GPPCTLLCCLRSPRTEPLACPLS*STCLER
Trigger: TCTTTCTAGACAGGTGCTTCAGGACAGAGGACAGGC...CAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTTTTCTGCATCGGGACTaGGGCTTGCCCCTGTTTGAT +
Preference number: 4 (lower is better)
Translates to: EPLDSWDLLRREQAPHLLFLHRD*GLPLFD
Trigger: ATCAAACAGGGGCAAGCCCCAGTCCCGATGCAGAAA...AAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATTGGATTGTGTAGACTTCTaGGGGCAGCTGAGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: GPPCTLLCCLRSPRTEPLDCVDF*GQLRFG
Trigger: GCCAAACCTCAGCTGCCCCCAGAAGTCTACACAATC...CAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp TTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTCTCAGAATGCAGCTaGGAGCCACCTGTATTCTGG +
Preference number: 4 (lower is better)
Translates to: FLGGSRLRICFSDLQASLFSECS*EPPVFW
Trigger: CCAGAATACAGGTGGCTCCCAGCTGCATTCTGAGAA...CAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp AGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTCTCAGAATGCAGCTaGGAGCCACCTGTATTCTGG +
Preference number: 4 (lower is better)
Translates to: RTEPLDSWDLLRREQAPHFSECS*EPPVFW
Trigger: CCAGAATACAGGTGGCTCCCAGCTGCATTCTGAGAA...ATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp CAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATGTTCCGGAAAGGTGTaGACACTCAGCAACTCATCA +
Preference number: 4 (lower is better)
Translates to: QGPPCTLLCCLRSPRTEPCSGKV*TLSNSS
Trigger: TGATGAGTTGCTGAGTGTGCACACCTTTCCGGAACA...TGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp GAGGGAGCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTGGGGGTTGGGTCCTGGCTTTTaGTTCCAAAGTTTGATTCTT +
Preference number: 4 (lower is better)
Translates to: EGAGSAFASLTSRLLCWGLGPGF*FQSLIL
Trigger: AAGAATCAAACTTTGGAAGCAAAAGCCAGGACCCAA...CCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp TGTCTTAGATCACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGGCAGGGGAGGGCCTTaGCCAATCACAGAGTTCTCA +
Preference number: 4 (lower is better)
Translates to: CLRSPRTEPLDSWDLLRRGRGGP*PITEFS
Trigger: TGAGAACTCTGTGATTGGGCAAGGCCCTCCCCTGCC...CCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTGATCTAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp TGTCTTAGATCACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGGCTGCCCCGGCCCATaGCATAGAAAGCTATGGGTT +
Preference number: 4 (lower is better)
Translates to: CLRSPRTEPLDSWDLLRRGCPGP*HRKLWV
Trigger: AACCCATAGCTTTCTATGCCATGGGCCGGGGCAGCC...CCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTGATCTAAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp AGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATGAGCCATTGGATTCTTaGGATCTTCTTAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: RTEPLDSWDLLRREQAPHEPLDS*DLLRRE
Trigger: CTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTC...ATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp TGTCTTAGATCACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGAAACCAGGACAGTaGGAGCTAACAGGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: CLRSPRTEPLDSWDLLRREKPGQ*ELTGPS
Trigger: GGAGGGCCCTGTTAGCTCCCACTGTCCTGGTTTCTC...CCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTGATCTAAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp AGATCACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGAGACAACAGCAGCATTaGACCAGGGCCCAGACTCAA +
Preference number: 4 (lower is better)
Translates to: RSPRTEPLDSWDLLRREQRQQQH*TRAQTQ
Trigger: TTGAGTCTGGGCCCTGGTCCAATGCTGCTGTTGTCT...CTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATTGGTCATGTCTGTGATCTaGAAGGTGCTGAAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: GPPCTLLCCLRSPRTEPLVMSVI*KVLKVG
Trigger: CCCAACCTTCAGCACCTTCCAGATCACAGACATGAC...CAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GTGGGAGCTAACAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGTCATGTCTGTGATCTaGAAGGTGCTGAAGGTTGGG +
Preference number: 4 (lower is better)
Translates to: VGANRALLAHFFAVLDHQVMSVI*KVLKVG
Trigger: CCCAACCTTCAGCACCTTCCAGATCACAGACATGAC...TTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTGTTAGCTCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368199.8
ENST00000392306.2
CDS-3UTR TCA 90 bp CAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATTTGCTTCCAAAGTTTaGTTCTTCGGTCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: QGPPCTLLCCLRSPRTEPFASKV*FFGPQG
Trigger: TCCCTGAGGACCGAAGAATCAAACTTTGGAAGCAAA...TGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp CCAGGGCCCAGACTCAAAAGGCTCAGAGGGCCAAGGAAATTAGACTCCAGGAGGTTGGGTCCTGGCTTTTaGTTCCAAAGTTTGATTCTT +
Preference number: 4 (lower is better)
Translates to: PGPRLKRLRGPRKLDSRRLGPGF*FQSLIL
Trigger: AAGAATCAAACTTTGGAAGCAAAAGCCAGGACCCAA...CCTCCTGGAGTCTAATTTCCTTGGCCCTCTGAGCCTTTTGAGTCTGGGCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATTGGAGCCATTGGATTCTTaGGATCTTCTTAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GPPCTLLCCLRSPRTEPLEPLDS*DLLRRE
Trigger: CTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTC...CAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATTGGGAGCCATTGGATTCTTaGGATCTTCTTAGGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ALLAHFFAVLDHQGLSHWEPLDS*DLLRRE
Trigger: CTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTC...CCAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GGGCCCAGACTCAAAAGGCTCAGAGGGCCAAGGAAATTAGACTCCAGGAGGAGACAAGGACTGAGCCATTaGATTCTTGGGATCTTCTTA +
Preference number: 4 (lower is better)
Translates to: GPRLKRLRGPRKLDSRRRQGLSH*ILGIFL
Trigger: TAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTG...TCTCCTCCTGGAGTCTAATTTCCTTGGCCCTCTGAGCCTTTTGAGTCTGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR TCA 90 bp GGAGCTAACAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGATTTGCTTCCAAAGTTTaGTTCTTCGGTCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: GANRALLAHFFAVLDHQGFASKV*FFGPQG
Trigger: TCCCTGAGGACCGAAGAATCAAACTTTGGAAGCAAA...TCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTGTTAGCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp CCAGACAAGAATCAACAAACAAGTTCTAACATCTGTTCTCACCAAACCATTCCTGCCCGGGTCTCGGCCTaGAGGAACAGGCTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: PDKNQQTSSNICSHQTIPARVSA*RNRLPS
Trigger: AGAAGGAAGCCTGTTCCTGCAGGCCGAGACCCGGGC...AGGAATGGTTTGGTGAGAACAGATGTTAGAACTTGTTTGTTGATTCTTGTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp ACAGTGGGAGCTAACAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCCTTGCACACTTCTTTaGTGTCTTAGATCACCAAGG +
Preference number: 4 (lower is better)
Translates to: TVGANRALLAHFFAVLDHPCTLL*CLRSPR
Trigger: CCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGG...GTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTGTTAGCTCCCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp GAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCCTTGCACACTTCTTTaGTGTCTTAGATCACCAAGG +
Preference number: 4 (lower is better)
Translates to: EPLDSWDLLRREQAPHLLPCTLL*CLRSPR
Trigger: CCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGG...AAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp AGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTGGCATAGAAAGCTATaGGTTCATCAGGCTCATTGT +
Preference number: 4 (lower is better)
Translates to: RTEPLDSWDLLRREQAPHWHRKL*VHQAHC
Trigger: ACAATGAGCCTGATGAACCCATAGCTTTCTATGCCA...ATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp CACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCAAGGACTGAGCCATTaGATTCTTGGGATCTTCTTA +
Preference number: 4 (lower is better)
Translates to: HQGLSHWILGIFLGGSRLQGLSH*ILGIFL
Trigger: TAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTG...GAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
3UTR CAA 72 bp CTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATaGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LLCCLRSPRTEP*DSWDLLRREQA
Trigger: AGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp CCAGACAAGAATCAACAAACAAGTTCTAACATCTGTTCTCACCAAACCATTCCTCTCCAGCAGCCTCTCTaGCTCCCTCCGGGTGATGAA +
Preference number: 4 (lower is better)
Translates to: PDKNQQTSSNICSHQTIPLQQPL*LPPGDE
Trigger: TTCATCACCCGGAGGGAGGCAGAGAGGCTGCTGGAG...AGGAATGGTTTGGTGAGAACAGATGTTAGAACTTGTTTGTTGATTCTTGTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368198.7
ENST00000368199.8
CDS-3UTR GCA 90 bp TTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTGGGTCCTGGCTTTTaGTTCCAAAGTTTGATTCTT +
Preference number: 4 (lower is better)
Translates to: FLGGSRLRICFSDLQASLLGPGF*FQSLIL
Trigger: AAGAATCAAACTTTGGAAGCAAAAGCCAGGACCCAA...CAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp CCAGACAAGAATCAACAAACAAGTTCTAACATCTGTTCTCACCAAACCATTCCTAGGAGCCAGTGGGCCTaGGTCTTCTGGAACCAAGCC +
Preference number: 4 (lower is better)
Translates to: PDKNQQTSSNICSHQTIPRSQWA*VFWNQA
Trigger: GGCTTGGTTCCAGAAGACCCAGGCCCACTGGCTCCT...AGGAATGGTTTGGTGAGAACAGATGTTAGAACTTGTTTGTTGATTCTTGTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTTGGCATAGAAAGCTATaGGTTCATCAGGCTCATTGT +
Preference number: 4 (lower is better)
Translates to: EPLDSWDLLRREQAPHLLWHRKL*VHQAHC
Trigger: ACAATGAGCCTGATGAACCCATAGCTTTCTATGCCA...AAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp CCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCTGGCATAGAAAGCTATaGGTTCATCAGGCTCATTGT +
Preference number: 4 (lower is better)
Translates to: PLDSWDLLRREQAPHLLLWHRKL*VHQAHC
Trigger: ACAATGAGCCTGATGAACCCATAGCTTTCTATGCCA...GAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp GCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATTGGCAAGGACTGAGCCATTaGATTCTTGGGATCTTCTTA +
Preference number: 4 (lower is better)
Translates to: ALLAHFFAVLDHQGLSHWQGLSH*ILGIFL
Trigger: TAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTG...CCAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR TCA 90 bp CCAGACAAGAATCAACAAACAAGTTCTAACATCTGTTCTCACCAAACCATTCCTGCCTGTCCTCTGTCCTaGAGCACCTGTCTAGAAAGA +
Preference number: 4 (lower is better)
Translates to: PDKNQQTSSNICSHQTIPACPLS*STCLER
Trigger: TCTTTCTAGACAGGTGCTTCAGGACAGAGGACAGGC...AGGAATGGTTTGGTGAGAACAGATGTTAGAACTTGTTTGTTGATTCTTGTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp CCAGACAAGAATCAACAAACAAGTTCTAACATCTGTTCTCACCAAACCATTCCTATGATTGGGCTGTACTaGGGGTTTGGGTCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: PDKNQQTSSNICSHQTIPMIGLY*GFGSWL
Trigger: AAGCCAGGACCCAAACCCCCAGTACAGCCCAATCAT...AGGAATGGTTTGGTGAGAACAGATGTTAGAACTTGTTTGTTGATTCTTGTCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CCA 90 bp CCAGACAAGAATCAACAAACAAGTTCTAACATCTGTTCTCACCAAACCATTCCTTTCTCAGAATGCAGCTaGGAGCCACCTGTATTCTGG +
Preference number: 4 (lower is better)
Translates to: PDKNQQTSSNICSHQTIPFSECS*EPPVFW
Trigger: CCAGAATACAGGTGGCTCCCAGCTGCATTCTGAGAA...AGGAATGGTTTGGTGAGAACAGATGTTAGAACTTGTTTGTTGATTCTTGTCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR GCA 90 bp CCAGACAAGAATCAACAAACAAGTTCTAACATCTGTTCTCACCAAACCATTCCTTGTTCCGGAAAGGTGTaGACACTCAGCAACTCATCA +
Preference number: 4 (lower is better)
Translates to: PDKNQQTSSNICSHQTIPCSGKV*TLSNSS
Trigger: TGATGAGTTGCTGAGTGTGCACACCTTTCCGGAACA...AGGAATGGTTTGGTGAGAACAGATGTTAGAACTTGTTTGTTGATTCTTGTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp GCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTGGGGGTCAGGCGCGGGGATGGGAGGCTaGGGCCTGAGCAGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: AGSAFASLTSRLLCWGSGAGMGG*GLSSWE
Trigger: CTCCCAGCTGCTCAGGCCCAAGCCTCCCATCCCCGC...GCCTGACCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS TCA 90 bp AAGTCCGGCTCCTGTAAGTCAGCACGAAGGTCACCGCGCTCTCGCTaGACCGCACCAAGTAGCACCCCTGAGGCTTGGGCTCCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: KSGSCKSARRSPRSR*TAPSSTPEAWAPAA
Trigger: GGCTGCTGGAGCCCAAGCCTCAGGGGTGCTACTTGGTGCGGTTCAGCGAGAGCGCGGTGACCTTCGTGCTGACTTACAGGAGCCGGACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
ENST00000486350.1
CDS GCA 90 bp TGGTGGGGCAGGGGAGGGCCTTGCCCAATCACAGAGTTCTCAGAATaGAGCTGGGAGCCACCTGTATTCTGGCCTCCTGGGACAGGCCTG +
Preference number: 5 (lower is better)
Translates to: WWGRGGPCPITEFSE*SWEPPVFWPPGTGL
Trigger: CAGGCCTGTCCCAGGAGGCCAGAATACAGGTGGCTCCCAGCTGCATTCTGAGAACTCTGTGATTGGGCAAGGCCCTCCCCTGCCCCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS GCA 90 bp GGGGTCAGGCCAGACCGCCTACTGAGGAGGCCCAAGGGGAAGCCATaGCTGTCCTCTGTCCTGAAGCACCTGTCTAGAAAGATTGTGGGG +
Preference number: 5 (lower is better)
Translates to: GVRPDRLLRRPKGKP*LSSVLKHLSRKIVG
Trigger: CCCCACAATCTTTCTAGACAGGTGCTTCAGGACAGAGGACAGGCATGGCTTCCCCTTGGGCCTCCTCAGTAGGCGGTCTGGCCTGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS CCA 90 bp GGACAGGCCTGGACCAGCTCTTCCGTAGGACAGGGTGCCCAAGGGTaGCGGGTAGGCCCTCATCTTCCACTTCCACATAGATGTTGCTGG +
Preference number: 5 (lower is better)
Translates to: GQAWTSSSVGQGAQG*RVGPHLPLPHRCCW
Trigger: CCAGCAACATCTATGTGGAAGTGGAAGATGAGGGCCTACCCGCCACCCTTGGGCACCCTGTCCTACGGAAGAGCTGGTCCAGGCCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
ENST00000468744.5
CDS-3UTR CAA 90 bp GGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTGCGGGGATGGGAGGCTaGGGCCTGAGCAGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: GLSHWILGIFLGGSRLRIAGMGG*GLSSWE
Trigger: CTCCCAGCTGCTCAGGCCCAAGCCTCCCATCCCCGC...AATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp GCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTGGGGGTCAGGCGGCTGTACTGGGGGTTaGGGTCCTGGCTTTTGCTTC +
Preference number: 5 (lower is better)
Translates to: AGSAFASLTSRLLCWGSGGCTGG*GPGFCF
Trigger: GAAGCAAAAGCCAGGACCCAAACCCCCAGTACAGCC...GCCTGACCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp GAGGGAGCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTGGGGGGGGGCTTGCCCCTGTTaGATGATTGGGCTGTACTGG +
Preference number: 5 (lower is better)
Translates to: EGAGSAFASLTSRLLCWGGACPC*MIGLYW
Trigger: CCAGTACAGCCCAATCATCAAACAGGGGCAAGCCCC...CCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTC
59% GC, longest homopolymer 9 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp GCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTGGGGGTCAGGCCATCGGGACTGGGGCTaGCCCCTGTTTGATGATTGG +
Preference number: 5 (lower is better)
Translates to: AGSAFASLTSRLLCWGSGHRDWG*PLFDDW
Trigger: CCAATCATCAAACAGGGGCAAGCCCCAGTCCCGATG...GCCTGACCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp CCAGGGCCCAGACTCAAAAGGCTCAGAGGGCCAAGGAAATTAGACTCCAGGAGGCATCGGGACTGGGGCTaGCCCCTGTTTGATGATTGG +
Preference number: 5 (lower is better)
Translates to: PGPRLKRLRGPRKLDSRRHRDWG*PLFDDW
Trigger: CCAATCATCAAACAGGGGCAAGCCCCAGTCCCGATG...CCTCCTGGAGTCTAATTTCCTTGGCCCTCTGAGCCTTTTGAGTCTGGGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp GAGGGAGCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTGGGGGGTCGTGGAACAGGGATaGTGTAGACTTCTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: EGAGSAFASLTSRLLCWGVVEQG*CRLLGA
Trigger: TGCCCCCAGAAGTCTACACAATCCCTGTTCCACGAC...CCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp CCAGGGCCCAGACTCAAAAGGCTCAGAGGGCCAAGGAAATTAGACTCCAGGAGGCAGACAACAGCAGCATaGGACCAGGGCCCAGACTCA +
Preference number: 5 (lower is better)
Translates to: PGPRLKRLRGPRKLDSRRQTTAA*DQGPDS
Trigger: TGAGTCTGGGCCCTGGTCCAATGCTGCTGTTGTCTG...CCTCCTGGAGTCTAATTTCCTTGGCCCTCTGAGCCTTTTGAGTCTGGGCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp TGTCTTAGATCACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGCGGGGATGGGAGGCTaGGGCCTGAGCAGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: CLRSPRTEPLDSWDLLRRAGMGG*GLSSWE
Trigger: CTCCCAGCTGCTCAGGCCCAAGCCTCCCATCCCCGC...CCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTGATCTAAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp GGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATTGCTCCAGGCTTCTTTGTaGGGGGTCAGGCCAGACCGC +
Preference number: 5 (lower is better)
Translates to: GPPCTLLCCLRSPRTEPLLQASL*GVRPDR
Trigger: GCGGTCTGGCCTGACCCCCAACAAAGAAGCCTGGAG...CAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp GCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATTGGCTCCAGGCTTCTTTGTaGGGGGTCAGGCCAGACCGC +
Preference number: 5 (lower is better)
Translates to: ALLAHFFAVLDHQGLSHWLQASL*GVRPDR
Trigger: GCGGTCTGGCCTGACCCCCAACAAAGAAGCCTGGAG...CCAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp AGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATGACCTCCAGGCTTCTTaGTTGGGGGTCAGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: RTEPLDSWDLLRREQAPHDLQAS*LGVRPD
Trigger: GTCTGGCCTGACCCCCAACAAAGAAGCCTGGAGGTC...ATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp CCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCAGACAACAGCAGCATaGGACCAGGGCCCAGACTCA +
Preference number: 5 (lower is better)
Translates to: PRTEPLDSWDLLRREQAPQTTAA*DQGPDS
Trigger: TGAGTCTGGGCCCTGGTCCAATGCTGCTGTTGTCTG...CGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp CACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCGGCTTCGTGACTCCCTaGGGGACATATCTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: HQGLSHWILGIFLGGSRLGFVTP*GTYLGQ
Trigger: CTGGCCCAGATATGTCCCCAAGGGAGTCACGAAGCC...GAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp CACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCGGCTGTACTGGGGGTTaGGGTCCTGGCTTTTGCTTC +
Preference number: 5 (lower is better)
Translates to: HQGLSHWILGIFLGGSRLGCTGG*GPGFCF
Trigger: GAAGCAAAAGCCAGGACCCAAACCCCCAGTACAGCC...GAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp GGGCCCAGACTCAAAAGGCTCAGAGGGCCAAGGAAATTAGACTCCAGGAGGAGAGTCGTGGAACAGGGATaGTGTAGACTTCTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: GPRLKRLRGPRKLDSRRRVVEQG*CRLLGA
Trigger: TGCCCCCAGAAGTCTACACAATCCCTGTTCCACGAC...TCTCCTCCTGGAGTCTAATTTCCTTGGCCCTCTGAGCCTTTTGAGTCTGGGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp ACAGTGGGAGCTAACAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACGACCTCCAGGCTTCTTaGTTGGGGGTCAGGCCAGAC +
Preference number: 5 (lower is better)
Translates to: TVGANRALLAHFFAVLDHDLQAS*LGVRPD
Trigger: GTCTGGCCTGACCCCCAACAAAGAAGCCTGGAGGTC...GTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTGTTAGCTCCCACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp CCAGGGCCCAGACTCAAAAGGCTCAGAGGGCCAAGGAAATTAGACTCCAGGAGGCTAACAGGGCCCTCCTaGCACACTTCTTTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: PGPRLKRLRGPRKLDSRRLTGPS*HTSLLS
Trigger: AGACAGCAAAGAAGTGTGCAAGGAGGGCCCTGTTAG...CCTCCTGGAGTCTAATTTCCTTGGCCCTCTGAGCCTTTTGAGTCTGGGCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp GGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATTGGGCTTCGTGACTCCCTaGGGGACATATCTGGGCCAG +
Preference number: 5 (lower is better)
Translates to: GPPCTLLCCLRSPRTEPLGFVTP*GTYLGQ
Trigger: CTGGCCCAGATATGTCCCCAAGGGAGTCACGAAGCC...CAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368199.8
ENST00000392306.2
CDS TCA 90 bp TGGGCTGTACTGGGGGTTTGGGTCCTGGCTTTTGCTTCCAAAGTTTaGTTCTTCGGTCCTCAGGGAAAGTCCTGCAGGCTCAGGAGTCTG +
Preference number: 5 (lower is better)
Translates to: WAVLGVWVLAFASKV*FFGPQGKSCRLRSL
Trigger: CAGACTCCTGAGCCTGCAGGACTTTCCCTGAGGACCGAAGAATCAAACTTTGGAAGCAAAAGCCAGGACCCAAACCCCCAGTACAGCCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
ENST00000468744.5
ENST00000486350.1
CDS-3UTR CAA 90 bp GGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACTGAGCCATTGCATCGGGACTGGGGCTaGCCCCTGTTTGATGATTGG +
Preference number: 5 (lower is better)
Translates to: GPPCTLLCCLRSPRTEPLHRDWG*PLFDDW
Trigger: CCAATCATCAAACAGGGGCAAGCCCCAGTCCCGATG...CAATGGCTCAGTCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp TTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGGTCGTGGAACAGGGATaGTGTAGACTTCTGGGGGCA +
Preference number: 5 (lower is better)
Translates to: FLGGSRLRICFSDLQASLVVEQG*CRLLGA
Trigger: TGCCCCCAGAAGTCTACACAATCCCTGTTCCACGAC...CAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp GGAGCTAACAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAAGGACAGACAACAGCAGCATaGGACCAGGGCCCAGACTCA +
Preference number: 5 (lower is better)
Translates to: GANRALLAHFFAVLDHQGQTTAA*DQGPDS
Trigger: TGAGTCTGGGCCCTGGTCCAATGCTGCTGTTGTCTG...TCCTTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTGTTAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp GAGGGAGCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTGGGGGTTTTGCTTCCAAAGTTaGATTCTTCGGTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: EGAGSAFASLTSRLLCWGFCFQS*ILRSSG
Trigger: CCCTGAGGACCGAAGAATCAAACTTTGGAAGCAAAA...CCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGCTCCCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp GCAGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTTGGGGGTCAGGCTTTTGCTTCCAAAGTTaGATTCTTCGGTCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: AGSAFASLTSRLLCWGSGFCFQS*ILRSSG
Trigger: CCCTGAGGACCGAAGAATCAAACTTTGGAAGCAAAA...GCCTGACCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp AGATCACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGGCTGTACTGGGGGTTaGGGTCCTGGCTTTTGCTTC +
Preference number: 5 (lower is better)
Translates to: RSPRTEPLDSWDLLRREQGCTGG*GPGFCF
Trigger: GAAGCAAAAGCCAGGACCCAAACCCCCAGTACAGCC...CTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp AGATCACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGGGGCTTGCCCCTGTTaGATGATTGGGCTGTACTGG +
Preference number: 5 (lower is better)
Translates to: RSPRTEPLDSWDLLRREQGACPC*MIGLYW
Trigger: CCAGTACAGCCCAATCATCAAACAGGGGCAAGCCCC...CTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTGATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp AGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATACCTGTCTAGAAAGATaGTGGGGGAGGGTGTGTCTC +
Preference number: 5 (lower is better)
Translates to: RTEPLDSWDLLRREQAPHTCLER*WGRVCL
Trigger: GAGACACACCCTCCCCCACAATCTTTCTAGACAGGT...ATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp CCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCACCTGTCTAGAAAGATaGTGGGGGAGGGTGTGTCTC +
Preference number: 5 (lower is better)
Translates to: PLDSWDLLRREQAPHLLLTCLER*WGRVCL
Trigger: GAGACACACCCTCCCCCACAATCTTTCTAGACAGGT...GAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp CCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCCTAACAGGGCCCTCCTaGCACACTTCTTTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: PLDSWDLLRREQAPHLLLLTGPS*HTSLLS
Trigger: AGACAGCAAAGAAGTGTGCAAGGAGGGCCCTGTTAG...GAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp TGTCTTAGATCACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGGGGCTTGCCCCTGTTaGATGATTGGGCTGTACTGG +
Preference number: 5 (lower is better)
Translates to: CLRSPRTEPLDSWDLLRRGACPC*MIGLYW
Trigger: CCAGTACAGCCCAATCATCAAACAGGGGCAAGCCCC...CCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTGATCTAAGACA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp CACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCCAAGGACTGAGCCATaGGATTCTTGGGATCTTCTT +
Preference number: 5 (lower is better)
Translates to: HQGLSHWILGIFLGGSRLPRTEP*DSWDLL
Trigger: AAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGG...GAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp GGGCCCAGACTCAAAAGGCTCAGAGGGCCAAGGAAATTAGACTCCAGGAGGAGATTTGGGTCCTGGCTTTaGCTTCCAAAGTTTGATTCT +
Preference number: 5 (lower is better)
Translates to: GPRLKRLRGPRKLDSRRRFGSWL*LPKFDS
Trigger: AGAATCAAACTTTGGAAGCAAAAGCCAGGACCCAAA...TCTCCTCCTGGAGTCTAATTTCCTTGGCCCTCTGAGCCTTTTGAGTCTGGGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp GTGGGAGCTAACAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACCAACCAAGGACTGAGCCATaGGATTCTTGGGATCTTCTT +
Preference number: 5 (lower is better)
Translates to: VGANRALLAHFFAVLDHQPRTEP*DSWDLL
Trigger: AAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGG...TTGGTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTGTTAGCTCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp AGATCACCAAGGACTGAGCCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGCCAAGGACTGAGCCATaGGATTCTTGGGATCTTCTT +
Preference number: 5 (lower is better)
Translates to: RSPRTEPLDSWDLLRREQPRTEP*DSWDLL
Trigger: AAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGG...CTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGGCTCAGTCCTTGGTGATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp CCATTGGATTCTTGGGATCTTCTTAGGAGGGAGCAGGCTCCGCATTTGCTTCTCTTTGGGTCCTGGCTTTaGCTTCCAAAGTTTGATTCT +
Preference number: 5 (lower is better)
Translates to: PLDSWDLLRREQAPHLLLFGSWL*LPKFDS
Trigger: AGAATCAAACTTTGGAAGCAAAAGCCAGGACCCAAA...GAGAAGCAAATGCGGAGCCTGCTCCCTCCTAAGAAGATCCCAAGAATCCAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp ACAGTGGGAGCTAACAGGGCCCTCCTTGCACACTTCTTTGCTGTCTTAGATCACTTTGGGTCCTGGCTTTaGCTTCCAAAGTTTGATTCT +
Preference number: 5 (lower is better)
Translates to: TVGANRALLAHFFAVLDHFGSWL*LPKFDS
Trigger: AGAATCAAACTTTGGAAGCAAAAGCCAGGACCCAAA...GTGATCTAAGACAGCAAAGAAGTGTGCAAGGAGGGCCCTGTTAGCTCCCACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp CCAGACAAGAATCAACAAACAAGTTCTAACATCTGTTCTCACCAAACCATTCCTACCTGTCTAGAAAGATaGTGGGGGAGGGTGTGTCTC +
Preference number: 5 (lower is better)
Translates to: PDKNQQTSSNICSHQTIPTCLER*WGRVCL
Trigger: GAGACACACCCTCCCCCACAATCTTTCTAGACAGGT...AGGAATGGTTTGGTGAGAACAGATGTTAGAACTTGTTTGTTGATTCTTGTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS-3UTR CAA 90 bp CCAGACAAGAATCAACAAACAAGTTCTAACATCTGTTCTCACCAAACCATTCCTCTAACAGGGCCCTCCTaGCACACTTCTTTGCTGTCT +
Preference number: 5 (lower is better)
Translates to: PDKNQQTSSNICSHQTIPLTGPS*HTSLLS
Trigger: AGACAGCAAAGAAGTGTGCAAGGAGGGCCCTGTTAG...AGGAATGGTTTGGTGAGAACAGATGTTAGAACTTGTTTGTTGATTCTTGTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS CCA 72 bp GCAGGGGCTGCCCCGTGCTGCAGGAGCCAGTGGGCCTaGGTCTTCTGGAACCAAGCCCGGGTCTCGGCCTGC +
Preference number: 6 (lower is better)
Translates to: AGAAPCCRSQWA*VFWNQARVSAC
Trigger: GCAGGCCGAGACCCGGGCTTGGTTCCAGAAGACCCAGGCCCACTGGCTCCTGCAGCACGGGGCAGCCCCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
ENST00000486350.1
ENST00000495306.1
CDS CCA 72 bp GGGCCAGCAGGAAGTGGCGGCAGCAAGTCCGGCTCCTaGAGGGCGCCGTTAGGGATCAGACTATCTCCCGCT +
Preference number: 6 (lower is better)
Translates to: GPAGSGGSKSGS*RAPLGIRLSPA
Trigger: AGCGGGAGATAGTCTGATCCCTAACGGCGCCCTCCAGGAGCCGGACTTGCTGCCGCCACTTCCTGCTGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468744.5
CDS GCA 72 bp GGGACAGGCCTGGACCAGCTCTTCCGTAGGACAGGGTaGCCAAGGGTGGCGGGTAGGCCCTCATCTTCCACT +
Preference number: 6 (lower is better)
Translates to: GTGLDQLFRRTG*PRVAGRPSSST
Trigger: AGTGGAAGATGAGGGCCTACCCGCCACCCTTGGGCACCCTGTCCTACGGAAGAGCTGGTCCAGGCCTGTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
ENST00000468744.5
CDS CCA 72 bp GGGAGCCACCTGTATTCTGGCCTCCTGGGACAGGCCTaGACCAGCTCTTCCGTAGGACAGGGTGCCCAAGGG +
Preference number: 6 (lower is better)
Translates to: GSHLYSGLLGQA*TSSSVGQGAQG
Trigger: CCCTTGGGCACCCTGTCCTACGGAAGAGCTGGTCCAGGCCTGTCCCAGGAGGCCAGAATACAGGTGGCTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS CCA 72 bp CGGGCGGTGTCGTGGAACAGGGATTGTGTAGACTTCTaGGGGCAGCTGAGGTTTGGCGGGGATGGGAGGCTT +
Preference number: 6 (lower is better)
Translates to: RAVSWNRDCVDF*GQLRFGGDGRL
Trigger: AAGCCTCCCATCCCCGCCAAACCTCAGCTGCCCCCAGAAGTCTACACAATCCCTGTTCCACGACACCGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
ENST00000468744.5
CDS TCA 72 bp TCCTGTAAGTCAGCACGAAGGTCACCGCGCTCTCGCTaGACCGCACCAAGTAGCACCCCTGAGGCTTGGGCT +
Preference number: 6 (lower is better)
Translates to: SCKSARRSPRSR*TAPSSTPEAWA
Trigger: AGCCCAAGCCTCAGGGGTGCTACTTGGTGCGGTTCAGCGAGAGCGCGGTGACCTTCGTGCTGACTTACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
ENST00000486350.1
CDS CAA 72 bp CTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTTGTaGGGGGTCAGGCCAGACCGCCTACTGAGGAGGCCC +
Preference number: 6 (lower is better)
Translates to: LRICFSDLQASL*GVRPDRLLRRP
Trigger: GGGCCTCCTCAGTAGGCGGTCTGGCCTGACCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS GCA 72 bp CCAGACCGCCTACTGAGGAGGCCCAAGGGGAAGCCATaGCTGTCCTCTGTCCTGAAGCACCTGTCTAGAAAG +
Preference number: 6 (lower is better)
Translates to: PDRLLRRPKGKP*LSSVLKHLSRK
Trigger: CTTTCTAGACAGGTGCTTCAGGACAGAGGACAGGCATGGCTTCCCCTTGGGCCTCCTCAGTAGGCGGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS CCA 72 bp AGGCTCATTGTAGATAGGATTGGAGGGCTTGGGGCGTaGGGCCGGGCGGTGTCGTGGAACAGGGATTGTGTA +
Preference number: 6 (lower is better)
Translates to: RLIVDRIGGLGA*GRAVSWNRDCV
Trigger: TACACAATCCCTGTTCCACGACACCGCCCGGCCCCACGCCCCAAGCCCTCCAATCCTATCTACAATGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
ENST00000468744.5
CDS CCA 72 bp TGGACCAGCTCTTCCGTAGGACAGGGTGCCCAAGGGTaGCGGGTAGGCCCTCATCTTCCACTTCCACATAGA +
Preference number: 6 (lower is better)
Translates to: WTSSSVGQGAQG*RVGPHLPLPHR
Trigger: TCTATGTGGAAGTGGAAGATGAGGGCCTACCCGCCACCCTTGGGCACCCTGTCCTACGGAAGAGCTGGTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
ENST00000468744.5
CDS CCA 72 bp GGGCCTTGCCCAATCACAGAGTTCTCAGAATGCAGCTaGGAGCCACCTGTATTCTGGCCTCCTGGGACAGGC +
Preference number: 6 (lower is better)
Translates to: GPCPITEFSECS*EPPVFWPPGTG
Trigger: GCCTGTCCCAGGAGGCCAGAATACAGGTGGCTCCCAGCTGCATTCTGAGAACTCTGTGATTGGGCAAGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS CAA 72 bp AGGCTCCGCATTTGCTTCTCTGACCTCCAGGCTTCTTaGTTGGGGGTCAGGCCAGACCGCCTACTGAGGAGG +
Preference number: 6 (lower is better)
Translates to: RLRICFSDLQAS*LGVRPDRLLRR
Trigger: CCTCCTCAGTAGGCGGTCTGGCCTGACCCCCAACAAAGAAGCCTGGAGGTCAGAGAAGCAAATGCGGAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
CDS TCA 72 bp GCCTCTCCAATGATCTCCCCTGGAGAGATGCCTCAGTaGAAGGCTAGGAAAACTCTGGGAGTGGGAGCCTGG +
Preference number: 6 (lower is better)
Translates to: ASPMISPGEMPQ*KARKTLGVGAW
Trigger: CCAGGCTCCCACTCCCAGAGTTTTCCTAGCCTTTCACTGAGGCATCTCTCCAGGGGAGATCATTGGAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495306.1
CDS CCA 72 bp CATGTCTGTGATCTGGAAGGTGCTTGGGGACATATCTaGGCCAGGGGGAACTCCATGAGGGCAGCCTCACAA +
Preference number: 6 (lower is better)
Translates to: HVCDLEGAWGHI*ARGNSMRAASQ
Trigger: TTGTGAGGCTGCCCTCATGGAGTTCCCCCTGGCCCAGATATGTCCCCAAGCACCTTCCAGATCACAGACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368198.7
CDS CAA 90 bp TTGGGCTGTACTGGGGGTTTGGGTCCTGGCTTTTGCTTCCAAAGTTaGATTCTTCGGTCCTCAGGGAAAGTCCTGCAGGCTCAGGAGTCT +
Preference number: 6 (lower is better)
Translates to: LGCTGGLGPGFCFQS*ILRSSGKVLQAQES
Trigger: AGACTCCTGAGCCTGCAGGACTTTCCCTGAGGACCGAAGAATCAAACTTTGGAAGCAAAAGCCAGGACCCAAACCCCCAGTACAGCCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
ENST00000468744.5
ENST00000486350.1
CDS CAA 90 bp CCCTGTTTGATGATTGGGCTGTACTGGGGGTTTGGGTCCTGGCTTTaGCTTCCAAAGTTTGATTCTTCGGTCCTCAGGGAAAGTCCTGCA +
Preference number: 6 (lower is better)
Translates to: PCLMIGLYWGFGSWL*LPKFDSSVLRESPA
Trigger: TGCAGGACTTTCCCTGAGGACCGAAGAATCAAACTTTGGAAGCAAAAGCCAGGACCCAAACCCCCAGTACAGCCCAATCATCAAACAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
ENST00000468744.5
ENST00000486350.1
CDS CAA 72 bp ATGATTGGGCTGTACTGGGGGTTTGGGTCCTGGCTTTaGCTTCCAAAGTTTGATTCTTCGGTCCTCAGGGAA +
Preference number: 6 (lower is better)
Translates to: MIGLYWGFGSWL*LPKFDSSVLRE
Trigger: TTCCCTGAGGACCGAAGAATCAAACTTTGGAAGCAAAAGCCAGGACCCAAACCCCCAGTACAGCCCAATCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000368198.7
ENST00000368199.8
ENST00000392306.2
ENST00000468744.5
ENST00000486350.1