RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SFMBT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000198879

Ensembl transcript IDs: ENST00000361972.8, ENST00000379711.2, ENST00000379713.7, ENST00000379713.8, ENST00000397167.5, ENST00000397167.6, ENST00000673876.1, ENST00000682043.1, ENST00000682101.1, ENST00000682180.1, ENST00000682896.1, ENST00000683762.1, ENST00000684547.1

Found 727 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCAGGCTGCGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTaGCACGTGCACAGACAGTGCTCACCCATGGTGACCGCAACTGCA +
Preference number: 1 (lower is better)
Translates to: ARLRPPVQWSQPSPP*HVHRQCSPMVTATA
Trigger: TGCAGTTGCGGTCACCATGGGTGAGCACTGTCTGTGCACGTGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCGCAGCCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR GCA 90 bp GACCGGAGAGATGGCACAGAGACAACTTTCATGGCGACGCCAGGCTaGGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCACG +
Preference number: 1 (lower is better)
Translates to: DRRDGTETTFMATPG*ALLCSGPSHLLPGT
Trigger: CGTGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCGCAGCCTGGCGTCGCCATGAAAGTTGTCTCTGTGCCATCTCTCCGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 90 bp GGGCTCTCCTCAAGGACCGGAGAGATGGCACAGAGACAACTTTCATaGCGACGCCAGGCTGCGCCCTCCTGTGCAGTGGTCCCAGCCATC +
Preference number: 1 (lower is better)
Translates to: GLSSRTGEMAQRQLS*RRQAAPSCAVVPAI
Trigger: GATGGCTGGGACCACTGCACAGGAGGGCGCAGCCTGGCGTCGCCATGAAAGTTGTCTCTGTGCCATCTCTCCGGTCCTTGAGGAGAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 90 bp AGAGACAACTTTCATGGCGACGCCAGGCTGCGCCCTCCTGTGCAGTaGTCCCAGCCATCTCCTCCCTGGCACGTGCACAGACAGTGCTCA +
Preference number: 1 (lower is better)
Translates to: RDNFHGDARLRPPVQ*SQPSPPWHVHRQCS
Trigger: TGAGCACTGTCTGTGCACGTGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCGCAGCCTGGCGTCGCCATGAAAGTTGTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR GCA 90 bp CCAGCTAGGGCAGAACGAGACAGAAGGGACGCTCAGAGGGACTCCTaGTCGGTGACCTGCTGCAGTGATCCTTCTAAGGGGGACGTAGCT +
Preference number: 1 (lower is better)
Translates to: PARAERDRRDAQRDS*SVTCCSDPSKGDVA
Trigger: AGCTACGTCCCCCTTAGAAGGATCACTGCAGCAGGTCACCGAGCAGGAGTCCCTCTGAGCGTCCCTTCTGTCTCGTTCTGCCCTAGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 90 bp GCTCCAAGGGAGCTGCCTGATTTGGGGCAGGAGAAAGGCAAAACGTaGGTGAGCCAAGAAGCAGGCCCACGTCTGGCAGGGTCTGATGCA +
Preference number: 1 (lower is better)
Translates to: APRELPDLGQEKGKT*VSQEAGPRLAGSDA
Trigger: TGCATCAGACCCTGCCAGACGTGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAATCAGGCAGCTCCCTTGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR TCA 90 bp CAAGGGAGCTGCCTGATTTGGGGCAGGAGAAAGGCAAAACGTGGGTaGGCCAAGAAGCAGGCCCACGTCTGGCAGGGTCTGATGCATGAC +
Preference number: 1 (lower is better)
Translates to: QGSCLIWGRRKAKRG*AKKQAHVWQGLMHD
Trigger: GTCATGCATCAGACCCTGCCAGACGTGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAATCAGGCAGCTCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR GCA 90 bp GTGCAGTGGTCCCAGCCATCTCCTCCCTGGCACGTGCACAGACAGTaGTCACCCATGGTGACCGCAACTGCACAGAGAAACGCTGAAGTT +
Preference number: 1 (lower is better)
Translates to: VQWSQPSPPWHVHRQ*SPMVTATAQRNAEV
Trigger: AACTTCAGCGTTTCTCTGTGCAGTTGCGGTCACCATGGGTGAGCACTGTCTGTGCACGTGCCAGGGAGGAGATGGCTGGGACCACTGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR TCA 90 bp CAAAACGTGGGTGAGCCAAGAAGCAGGCCCACGTCTGGCAGGGTCTaGTGCATGACTTTAACTGGCACTCCCCAGAAGCGACTGCTGCTG +
Preference number: 1 (lower is better)
Translates to: QNVGEPRSRPTSGRV*CMTLTGTPQKRLLL
Trigger: CAGCAGCAGTCGCTTCTGGGGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTGGGCCTGCTTCTTGGCTCACCCACGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR CCA 90 bp CAAACACTTTCCCCTGCGACAGTGGCTGTATCCTTCCTGAGCTCCTaGCGGGCCACACACTCTAGCTTCCTAGATGGGCTCCAGAGAGCT +
Preference number: 1 (lower is better)
Translates to: QTLSPATVAVSFLSS*RATHSSFLDGLQRA
Trigger: AGCTCTCTGGAGCCCATCTAGGAAGCTAGAGTGTGTGGCCCGCCAGGAGCTCAGGAAGGATACAGCCACTGTCGCAGGGGAAAGTGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 90 bp CTGGGTCCTAAAATCTTTCTGGGCTCTCCTCAAGGACCGGAGAGATaGCACAGAGACAACTTTCATGGCGACGCCAGGCTGCGCCCTCCT +
Preference number: 1 (lower is better)
Translates to: LGPKIFLGSPQGPER*HRDNFHGDARLRPP
Trigger: AGGAGGGCGCAGCCTGGCGTCGCCATGAAAGTTGTCTCTGTGCCATCTCTCCGGTCCTTGAGGAGAGCCCAGAAAGATTTTAGGACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR GCA 90 bp CTGACTCCAGATTCACTGCTCCTGCTGCATCATGCCTGGTTCATATaGTGCCAGCTAGGGCAGAACGAGACAGAAGGGACGCTCAGAGGG +
Preference number: 1 (lower is better)
Translates to: LTPDSLLLLHHAWFI*CQLGQNETEGTLRG
Trigger: CCCTCTGAGCGTCCCTTCTGTCTCGTTCTGCCCTAGCTGGCAGCATATGAACCAGGCATGATGCAGCAGGAGCAGTGAATCTGGAGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR GCA 90 bp GGGTGCCAAGTGGCTGACTCCAGATTCACTGCTCCTGCTGCATCATaGCTGGTTCATATGCTGCCAGCTAGGGCAGAACGAGACAGAAGG +
Preference number: 1 (lower is better)
Translates to: GCQVADSRFTAPAAS*LVHMLPARAERDRR
Trigger: CCTTCTGTCTCGTTCTGCCCTAGCTGGCAGCATATGAACCAGGCATGATGCAGCAGGAGCAGTGAATCTGGAGTCAGCCACTTGGCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 90 bp GCCAAGTGGCTGACTCCAGATTCACTGCTCCTGCTGCATCATGCCTaGTTCATATGCTGCCAGCTAGGGCAGAACGAGACAGAAGGGACG +
Preference number: 1 (lower is better)
Translates to: AKWLTPDSLLLLHHA*FICCQLGQNETEGT
Trigger: CGTCCCTTCTGTCTCGTTCTGCCCTAGCTGGCAGCATATGAACCAGGCATGATGCAGCAGGAGCAGTGAATCTGGAGTCAGCCACTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR TCA 90 bp GAATGCAGTCCTCATCTGAGGAAACCCTGCTCCAAGGGAGCTGCCTaGTTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGC +
Preference number: 1 (lower is better)
Translates to: ECSPHLRKPCSKGAA*FGAGERQNVGEPRS
Trigger: GCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAATCAGGCAGCTCCCTTGGAGCAGGGTTTCCTCAGATGAGGACTGCATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR TCA 90 bp AGCCATCTCCTCCCTGGCACGTGCACAGACAGTGCTCACCCATGGTaGCCGCAACTGCACAGAGAAACGCTGAAGTTAAACTGTCAGGGT +
Preference number: 1 (lower is better)
Translates to: SHLLPGTCTDSAHPW*PQLHRETLKLNCQG
Trigger: ACCCTGACAGTTTAACTTCAGCGTTTCTCTGTGCAGTTGCGGTCACCATGGGTGAGCACTGTCTGTGCACGTGCCAGGGAGGAGATGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR TCA 90 bp GACTGCAGAGTCTCCCGGGCCAGTTCCAATAAGTTCCAAGTGGCATaGTGCCCACAGGAAGTAGGCGCACTAAGGAGAGGACTTTGGTCC +
Preference number: 1 (lower is better)
Translates to: DCRVSRASSNKFQVA*CPQEVGALRRGLWS
Trigger: GGACCAAAGTCCTCTCCTTAGTGCGCCTACTTCCTGTGGGCATCATGCCACTTGGAACTTATTGGAACTGGCCCGGGAGACTCTGCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR GCA 90 bp ACTCCAGATTCACTGCTCCTGCTGCATCATGCCTGGTTCATATGCTaGCAGCTAGGGCAGAACGAGACAGAAGGGACGCTCAGAGGGACT +
Preference number: 1 (lower is better)
Translates to: TPDSLLLLHHAWFIC*QLGQNETEGTLRGT
Trigger: AGTCCCTCTGAGCGTCCCTTCTGTCTCGTTCTGCCCTAGCTGGCAGCATATGAACCAGGCATGATGCAGCAGGAGCAGTGAATCTGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR TCA 90 bp AAGGATGTCGCTGCCAGCTGCATTGCAAAGGAGTTGCCACCAAGATaGAACCGCAAGTGCCACTCAACCAGGGTCACACGCCTATCCATG +
Preference number: 1 (lower is better)
Translates to: KDVAASCIAKELPPR*NRKCHSTRVTRLSM
Trigger: CATGGATAGGCGTGTGACCCTGGTTGAGTGGCACTTGCGGTTTCATCTTGGTGGCAACTCCTTTGCAATGCAGCTGGCAGCGACATCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR TCA 90 bp TCCAAGAGGCCAGCCAACTCTCGCAGCCACAGCTTTGTCTGCACGTaGCCTGGCGGATTTAACACAACTGCCCAGGAAATTCCACAAGCA +
Preference number: 1 (lower is better)
Translates to: SKRPANSRSHSFVCT*PGGFNTTAQEIPQA
Trigger: TGCTTGTGGAATTTCCTGGGCAGTTGTGTTAAATCCGCCAGGTCACGTGCAGACAAAGCTGTGGCTGCGAGAGTTGGCTGGCCTCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR TCA 90 bp GTGACCGCAACTGCACAGAGAAACGCTGAAGTTAAACTGTCAGGGTaGAGGATACGGAGAGTCTTGGGCGCTTGGCTCCACGGGAAGCAA +
Preference number: 1 (lower is better)
Translates to: VTATAQRNAEVKLSG*RIRRVLGAWLHGKQ
Trigger: TTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTCCGTATCCTTCACCCTGACAGTTTAACTTCAGCGTTTCTCTGTGCAGTTGCGGTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 90 bp CAGGGTCTGAGTGGAGATATGGAATCGCTCATGAGGATATGGAGATaGCTTCTGGTCCAAGAGGCCAGCCAACTCTCGCAGCCACAGCTT +
Preference number: 1 (lower is better)
Translates to: QGLSGDMESLMRIWR*LLVQEASQLSQPQL
Trigger: AAGCTGTGGCTGCGAGAGTTGGCTGGCCTCTTGGACCAGAAGCCATCTCCATATCCTCATGAGCGATTCCATATCTCCACTCAGACCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 90 bp AGTCCACAGGGTCTGAGTGGAGATATGGAATCGCTCATGAGGATATaGAGATGGCTTCTGGTCCAAGAGGCCAGCCAACTCTCGCAGCCA +
Preference number: 1 (lower is better)
Translates to: SPQGLSGDMESLMRI*RWLLVQEASQLSQP
Trigger: TGGCTGCGAGAGTTGGCTGGCCTCTTGGACCAGAAGCCATCTCCATATCCTCATGAGCGATTCCATATCTCCACTCAGACCCTGTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 90 bp GAAACGCTGAAGTTAAACTGTCAGGGTGAAGGATACGGAGAGTCTTaGGCGCTTGGCTCCACGGGAAGCAAACACTTTCCCCTGCGACAG +
Preference number: 1 (lower is better)
Translates to: ETLKLNCQGEGYGES*ALGSTGSKHFPLRQ
Trigger: CTGTCGCAGGGGAAAGTGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTCCGTATCCTTCACCCTGACAGTTTAACTTCAGCGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 90 bp ACCCAAGATCTCAGAGTTTGTTCTCAGCGAAACCAGGGTGCCAAGTaGCTGACTCCAGATTCACTGCTCCTGCTGCATCATGCCTGGTTC +
Preference number: 1 (lower is better)
Translates to: TQDLRVCSQRNQGAK*LTPDSLLLLHHAWF
Trigger: GAACCAGGCATGATGCAGCAGGAGCAGTGAATCTGGAGTCAGCCACTTGGCACCCTGGTTTCGCTGAGAACAAACTCTGAGATCTTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 90 bp AGCGACTGCTGCTGTGCTTTGAAAACATGGAAACAGCTCACAGGCTaGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACT +
Preference number: 1 (lower is better)
Translates to: SDCCCALKTWKQLTG*RRQKILGFWFSGDT
Trigger: AGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGAGCTGTTTCCATGTTTTCAAAGCACAGCAGCAGTCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR CCA 90 bp TCGTCAGCACATCGCTTCAGCCACACAAAAAGCACTGCTCTGCGTTaGTTAGGCGACACGACCGTCATACTTACTGGGCCAAATCCCATT +
Preference number: 1 (lower is better)
Translates to: SSAHRFSHTKSTALR*LGDTTVILTGPNPI
Trigger: AATGGGATTTGGCCCAGTAAGTATGACGGTCGTGTCGCCTAACCAACGCAGAGCAGTGCTTTTTGTGTGGCTGAAGCGATGTGCTGACGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR TCA 90 bp GGGAGGCTATTTGGATGGCAGTGTCTGCAGAAAGCACGCATCTGCTaGAGGATATATGCAAAGGTGCTGTCAGGTCTGAGCTCACGTAAC +
Preference number: 1 (lower is better)
Translates to: GRLFGWQCLQKARIC*RIYAKVLSGLSSRN
Trigger: GTTACGTGAGCTCAGACCTGACAGCACCTTTGCATATATCCTTCAGCAGATGCGTGCTTTCTGCAGACACTGCCATCCAAATAGCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379713.7
3UTR GCA 90 bp TGCTTCCAGTGTCTGCTTGGGAACTGTGGGAGGGTTTGGTTTCCTTaGATAAGTTTAAGAAGGCATCTTGGCAGCCACCACAGCGGAACA +
Preference number: 1 (lower is better)
Translates to: CFQCLLGNCGRVWFP*ISLRRHLGSHHSGT
Trigger: TGTTCCGCTGTGGTGGCTGCCAAGATGCCTTCTTAAACTTATGCAAGGAAACCAAACCCTCCCACAGTTCCCAAGCAGACACTGGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 90 bp AGAAGCCTCTGCTTCCAGTGTCTGCTTGGGAACTGTGGGAGGGTTTaGTTTCCTTGCATAAGTTTAAGAAGGCATCTTGGCAGCCACCAC +
Preference number: 1 (lower is better)
Translates to: RSLCFQCLLGNCGRV*FPCISLRRHLGSHH
Trigger: GTGGTGGCTGCCAAGATGCCTTCTTAAACTTATGCAAGGAAACCAAACCCTCCCACAGTTCCCAAGCAGACACTGGAAGCAGAGGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR TCA 90 bp AAGATCTCAGAGTTTGTTCTCAGCGAAACCAGGGTGCCAAGTGGCTaGCTCCAGATTCACTGCTCCTGCTGCATCATGCCTGGTTCATAT +
Preference number: 1 (lower is better)
Translates to: KISEFVLSETRVPSG*LQIHCSCCIMPGSY
Trigger: ATATGAACCAGGCATGATGCAGCAGGAGCAGTGAATCTGGAGTCAGCCACTTGGCACCCTGGTTTCGCTGAGAACAAACTCTGAGATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR GCA 90 bp CATGTTTTTATAAGGATGTCGCTGCCAGCTGCATTGCAAAGGAGTTaGCACCAAGATGAAACCGCAAGTGCCACTCAACCAGGGTCACAC +
Preference number: 1 (lower is better)
Translates to: HVFIRMSLPAALQRS*HQDETASATQPGSH
Trigger: GTGTGACCCTGGTTGAGTGGCACTTGCGGTTTCATCTTGGTGGCAACTCCTTTGCAATGCAGCTGGCAGCGACATCCTTATAAAAACATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 90 bp AGGAAGGGTGAGAAGCCTCTGCTTCCAGTGTCTGCTTGGGAACTGTaGGAGGGTTTGGTTTCCTTGCATAAGTTTAAGAAGGCATCTTGG +
Preference number: 1 (lower is better)
Translates to: RKGEKPLLPVSAWEL*EGLVSLHKFKKASW
Trigger: CCAAGATGCCTTCTTAAACTTATGCAAGGAAACCAAACCCTCCCACAGTTCCCAAGCAGACACTGGAAGCAGAGGCTTCTCACCCTTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 90 bp GTCACAGAAATGCAAGCAGCTCATCAGCCCACCGCAGAATTTTACTaGAACTGTGGAGACTCTAGTCCAAGGGACGAGCTCAAGGTGATT +
Preference number: 1 (lower is better)
Translates to: VTEMQAAHQPTAEFY*NCGDSSPRDELKVI
Trigger: AATCACCTTGAGCTCGTCCCTTGGACTAGAGTCTCCACAGTTCCAGTAAAATTCTGCGGTGGGCTGATGAGCTGCTTGCATTTCTGTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 90 bp AGGGAGACAGAAGTGACATTTGTGCTGCAAGTCCCTGTTCTTTTGTaGCCACCACATTCCCTCACCCTCGTCTCAAATACAACAGGAACA +
Preference number: 1 (lower is better)
Translates to: RETEVTFVLQVPVLL*PPHSLTLVSNTTGT
Trigger: TGTTCCTGTTGTATTTGAGACGAGGGTGAGGGAATGTGGTGGCCACAAAAGAACAGGGACTTGCAGCACAAATGTCACTTCTGTCTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR TCA 90 bp AACAAGCTCCATGAGTTTAGGGTGAGACTGAGCGATGGGCTGTCATaGTTCAAGTTGAGGTGGCATCTCTTTCTCAGGGTTTTCAAACGG +
Preference number: 1 (lower is better)
Translates to: NKLHEFRVRLSDGLS*FKLRWHLFLRVFKR
Trigger: CCGTTTGAAAACCCTGAGAAAGAGATGCCACCTCAACTTGAATCATGACAGCCCATCGCTCAGTCTCACCCTAAACTCATGGAGCTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR GCA 90 bp CGCAAGTGCCACTCAACCAGGGTCACACGCCTATCCATGGGAAACTaGATATATAAATGTGCTCGTGTGATTACAGGAAACACTACAGCA +
Preference number: 1 (lower is better)
Translates to: RKCHSTRVTRLSMGN*IYKCARVITGNTTA
Trigger: TGCTGTAGTGTTTCCTGTAATCACACGAGCACATTTATATATGCAGTTTCCCATGGATAGGCGTGTGACCCTGGTTGAGTGGCACTTGCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR GCA 90 bp ATCAAAGAGTCAGCGCGGGGAAAATGCCAAAGATCTGGAAATGGATaGCCTTTCCAATCGTTTGACAGAGTTGAACTCCACAAGACTGAG +
Preference number: 1 (lower is better)
Translates to: IKESARGKCQRSGNG*PFQSFDRVELHKTE
Trigger: CTCAGTCTTGTGGAGTTCAACTCTGTCAAACGATTGGAAAGGGCATCCATTTCCAGATCTTTGGCATTTTCCCCGCGCTGACTCTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR TCA 90 bp TCACACGCCTATCCATGGGAAACTGCATATATAAATGTGCTCGTGTaGTTACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGG +
Preference number: 1 (lower is better)
Translates to: SHAYPWETAYINVLV*LQETLQHGVRFLPW
Trigger: CCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCACACGAGCACATTTATATATGCAGTTTCCCATGGATAGGCGTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR TCA 90 bp TGCAAAACAGTGAAAGAGCTTTCAACAATCACGACGAGGGATAGTTaGTGCTTCCAGAGATCATGCTGGCTCCTGTTTCAAGCAAGTGAG +
Preference number: 1 (lower is better)
Translates to: CKTVKELSTITTRDS*CFQRSCWLLFQASE
Trigger: CTCACTTGCTTGAAACAGGAGCCAGCATGATCTCTGGAAGCATCAACTATCCCTCGTCGTGATTGTTGAAAGCTCTTTCACTGTTTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 90 bp TGGCTGTACCATTTAACATATCCCGGAAAATCAAAGTTTCAGTCCTaGAAACCTTTACCAACACCGCATCCCAGCAATAATGGGCCACCT +
Preference number: 1 (lower is better)
Translates to: WLYHLTYPGKSKFQS*KPLPTPHPSNNGPP
Trigger: AGGTGGCCCATTATTGCTGGGATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATTTTCCGGGATATGTTAAATGGTACAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR TCA 90 bp CACTCCCTGATCCGGCTACGATTAAACAACAACACTGGAGATAGTTaGGGGTCTAGAAAAGACTGGGTAGAGTTTGTCTCTACAGATGTT +
Preference number: 1 (lower is better)
Translates to: HSLIRLRLNNNTGDS*GSRKDWVEFVSTDV
Trigger: AACATCTGTAGAGACAAACTCTACCCAGTCTTTTCTAGACCCTCAACTATCTCCAGTGTTGTTGTTTAATCGTAGCCGGATCAGGGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR TCA 90 bp ATAAGGTGGGAGAACCCAGAAGCCGTGCAGCTCAAATACTGTGTCTaGCTCCAACTTGGATCAAATGACTCTAATTTTGAAAGTGATGGA +
Preference number: 1 (lower is better)
Translates to: IRWENPEAVQLKYCV*LQLGSNDSNFESDG
Trigger: TCCATCACTTTCAAAATTAGAGTCATTTGATCCAAGTTGGAGTCAGACACAGTATTTGAGCTGCACGGCTTCTGGGTTCTCCCACCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR TCA 90 bp TCCAACAGACAGATAATTCTAATACAGAGCATTCAATTTACACCATaGCGGTTTCCCAGACATTCATCTTACTCTACTGGCCGCTACTCT +
Preference number: 1 (lower is better)
Translates to: SNRQIILIQSIQFTP*RFPRHSSYSTGRYS
Trigger: AGAGTAGCGGCCAGTAGAGTAAGATGAATGTCTGGGAAACCGTCATGGTGTAAATTGAATGCTCTGTATTAGAATTATCTGTCTGTTGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379713.7
3UTR TCA 90 bp AGTGATAGAGCTATGAGAACTGGTCAACTTAAGAGTTCAACCATGTaGAAGGGAGTAATTTCCAGAAAATTCTTGAACAGAAAAGGGCAG +
Preference number: 1 (lower is better)
Translates to: SDRAMRTGQLKSSTM*KGVISRKFLNRKGQ
Trigger: CTGCCCTTTTCTGTTCAAGAATTTTCTGGAAATTACTCCCTTTCACATGGTTGAACTCTTAAGTTGACCAGTTCTCATAGCTCTATCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp CGACGCCAGGCTGCGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCAAAGCAGGCCCACGTCTaGCAGGGTCTGATGCATGAC +
Preference number: 2 (lower is better)
Translates to: RRQAAPSCAVVPAISSLAKQAHV*QGLMHD
Trigger: GTCATGCATCAGACCCTGCCAGACGTGGGCCTGCTT...TGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCGCAGCCTGGCGTCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp CGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCACGTGCACAGACAGGGGACTCCTGCTCGGTaGCCTGCTGCAGTGATCCTT +
Preference number: 2 (lower is better)
Translates to: RPPVQWSQPSPPWHVHRQGTPAR*PAAVIL
Trigger: AAGGATCACTGCAGCAGGTCACCGAGCAGGAGTCCC...CTGTCTGTGCACGTGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp CGACGCCAGGCTGCGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCAAAGGCCAAAAGCATGTaGCTGAGAAGGCAGGGGTGG +
Preference number: 2 (lower is better)
Translates to: RRQAAPSCAVVPAISSLAKAKSM*LRRQGW
Trigger: CCACCCCTGCCTTCTCAGCCACATGCTTTTGGCCTT...TGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCGCAGCCTGGCGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp CGACGCCAGGCTGCGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCAACGTCTGGCAGGGTCTaGTGCATGACTTTAACTGGC +
Preference number: 2 (lower is better)
Translates to: RRQAAPSCAVVPAISSLATSGRV*CMTLTG
Trigger: GCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGT...TGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCGCAGCCTGGCGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp CGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCACGTGCACAGACAGAAGGCAAAACGTGGGTaGGCCAAGAAGCAGGCCCAC +
Preference number: 2 (lower is better)
Translates to: RPPVQWSQPSPPWHVHRQKAKRG*AKKQAH
Trigger: GTGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTT...CTGTCTGTGCACGTGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp CGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCACGTGCACAGACAGTTGCATGGAGATGCCTaGCGGCCTTCCTTCACTCCC +
Preference number: 2 (lower is better)
Translates to: RPPVQWSQPSPPWHVHRQLHGDA*RPSFTP
Trigger: GGGAGTGAAGGAAGGCCGGCAGGCATCTCCATGCAA...CTGTCTGTGCACGTGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp CGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCACGTGCACAGACAGCGCTGCCAGCTGCATTaGAAAGGAGTTGCCACCAAG +
Preference number: 2 (lower is better)
Translates to: RPPVQWSQPSPPWHVHRQRCQLH*KGVATK
Trigger: CTTGGTGGCAACTCCTTTGCAATGCAGCTGGCAGCG...CTGTCTGTGCACGTGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp CGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCACGTGCACAGACAGTGCTCGGTGACCTGCTaGAGTGATCCTTCTAAGGGG +
Preference number: 2 (lower is better)
Translates to: RPPVQWSQPSPPWHVHRQCSVTC*SDPSKG
Trigger: CCCCTTAGAAGGATCACTGCAGCAGGTCACCGAGCA...CTGTCTGTGCACGTGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp CGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCACGTGCACAGACAGGCCTGGTTCATATGCTaGCAGCTAGGGCAGAACGAG +
Preference number: 2 (lower is better)
Translates to: RPPVQWSQPSPPWHVHRQAWFIC*QLGQNE
Trigger: CTCGTTCTGCCCTAGCTGGCAGCATATGAACCAGGC...CTGTCTGTGCACGTGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp CGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCACGTGCACAGACAGTCAGCGAAACCAGGGTaGCAAGTGGCTGACTCCAGA +
Preference number: 2 (lower is better)
Translates to: RPPVQWSQPSPPWHVHRQSAKPG*QVADSR
Trigger: TCTGGAGTCAGCCACTTGGCACCCTGGTTTCGCTGA...CTGTCTGTGCACGTGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp CGACGCCAGGCTGCGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCATCGCTCATGAGGATATaGAGATGGCTTCTGGTCCAA +
Preference number: 2 (lower is better)
Translates to: RRQAAPSCAVVPAISSLASLMRI*RWLLVQ
Trigger: TTGGACCAGAAGCCATCTCCATATCCTCATGAGCGA...TGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCGCAGCCTGGCGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp CACTGCTCTGCGTTGGTTAGGCGACACGACCGTCATACTTACTGGGCCAAATCCGGCTGCGCCCTCCTGTaGAGTGGTCCCAGCCATCTC +
Preference number: 2 (lower is better)
Translates to: HCSALVRRHDRHTYWAKSGCALL*SGPSHL
Trigger: GAGATGGCTGGGACCACTGCACAGGAGGGCGCAGCC...GGATTTGGCCCAGTAAGTATGACGGTCGTGTCGCCTAACCAACGCAGAGCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp GAGAGTCTTGGGCGCTTGGCTCCACGGGAAGCAAACACTTTCCCCTGCGACAGTTCCTTCCTGAGCTCCTaGCGGGCCACACACTCTAGC +
Preference number: 2 (lower is better)
Translates to: ESLGRLAPREANTFPCDSSFLSS*RATHSS
Trigger: GCTAGAGTGTGTGGCCCGCCAGGAGCTCAGGAAGGA...ACTGTCGCAGGGGAAAGTGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp CACTGCTCTGCGTTGGTTAGGCGACACGACCGTCATACTTACTGGGCCAAATCCCTCCTCCCTGGCACGTaGACAGACAGTGCTCACCCA +
Preference number: 2 (lower is better)
Translates to: HCSALVRRHDRHTYWAKSLLPGT*TDSAHP
Trigger: TGGGTGAGCACTGTCTGTGCACGTGCCAGGGAGGAG...GGATTTGGCCCAGTAAGTATGACGGTCGTGTCGCCTAACCAACGCAGAGCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp GGAGAGTCTTGGGCGCTTGGCTCCACGGGAAGCAAACACTTTCCCCTGCGACAGAAAAAGCAGGAAGGGTaGGAAGCCTCTGCTTCCAGT +
Preference number: 2 (lower is better)
Translates to: GESWALGSTGSKHFPLRQKKQEG*EASASS
Trigger: ACTGGAAGCAGAGGCTTCTCACCCTTCCTGCTTTTT...CTGTCGCAGGGGAAAGTGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp CACGTGCACAGACAGTGCTCACCCATGGTGACCGCAACTGCACAGAGAAACGCTTGCTCGGTGACCTGCTaGAGTGATCCTTCTAAGGGG +
Preference number: 2 (lower is better)
Translates to: HVHRQCSPMVTATAQRNACSVTC*SDPSKG
Trigger: CCCCTTAGAAGGATCACTGCAGCAGGTCACCGAGCA...AGCGTTTCTCTGTGCAGTTGCGGTCACCATGGGTGAGCACTGTCTGTGCACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp TCCACCACGACGGAAATCCCCGGAGAATCCAGGCTCAGAAGGACACTGGCAACATCAGCGAAACCAGGGTaGCAAGTGGCTGACTCCAGA +
Preference number: 2 (lower is better)
Translates to: STTTEIPGESRLRRTLATSAKPG*QVADSR
Trigger: TCTGGAGTCAGCCACTTGGCACCCTGGTTTCGCTGA...TGTTGCCAGTGTCCTTCTGAGCCTGGATTCTCCGGGGATTTCCGTCGTGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp CACTGCTCTGCGTTGGTTAGGCGACACGACCGTCATACTTACTGGGCCAAATCCGAGTTCCCCACGCTGTaGAGCTCCGTGGTGAAGTTC +
Preference number: 2 (lower is better)
Translates to: HCSALVRRHDRHTYWAKSEFPTL*SSVVKF
Trigger: GAACTTCACCACGGAGCTGCACAGCGTGGGGAACTC...GGATTTGGCCCAGTAAGTATGACGGTCGTGTCGCCTAACCAACGCAGAGCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CAA 90 bp ATGGCTTCTGGTCCAAGAGGCCAGCCAACTCTCGCAGCCACAGCTTaGTCTGCACGTGACCTGGCGGATTTAACACAACTGCCCAGGAAA +
Preference number: 2 (lower is better)
Translates to: MASGPRGQPTLAATA*SARDLADLTQLPRK
Trigger: TTTCCTGGGCAGTTGTGTTAAATCCGCCAGGTCACGTGCAGACAAAGCTGTGGCTGCGAGAGTTGGCTGGCCTCTTGGACCAGAAGCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp CGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCACGTGCACAGACAGATAAATGTGCTCGTGTaGTTACAGGAAACACTACAG +
Preference number: 2 (lower is better)
Translates to: RPPVQWSQPSPPWHVHRQINVLV*LQETLQ
Trigger: CTGTAGTGTTTCCTGTAATCACACGAGCACATTTAT...CTGTCTGTGCACGTGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp GCTGATGTGAAGTCCATCCACCACGACGGAAATCCCCGGAGAATCCAGGCTCAGGAGTTGCCACCAAGATaGAACCGCAAGTGCCACTCA +
Preference number: 2 (lower is better)
Translates to: ADVKSIHHDGNPRRIQAQELPPR*NRKCHS
Trigger: TGAGTGGCACTTGCGGTTTCATCTTGGTGGCAACTC...CTGAGCCTGGATTCTCCGGGGATTTCCGTCGTGGTGGATGGACTTCACATCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp TCCACCACGACGGAAATCCCCGGAGAATCCAGGCTCAGAAGGACACTGGCAACAGTAGTCCACAGGGTCTaGGTGGAGATATGGAATCGC +
Preference number: 2 (lower is better)
Translates to: STTTEIPGESRLRRTLATVVHRV*VEIWNR
Trigger: GCGATTCCATATCTCCACTCAGACCCTGTGGACTAC...TGTTGCCAGTGTCCTTCTGAGCCTGGATTCTCCGGGGATTTCCGTCGTGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp GGAGAGTCTTGGGCGCTTGGCTCCACGGGAAGCAAACACTTTCCCCTGCGACAGTCAGCGCGGGGAAAATaGCAAAGATCTGGAAATGGA +
Preference number: 2 (lower is better)
Translates to: GESWALGSTGSKHFPLRQSARGK*QRSGNG
Trigger: TCCATTTCCAGATCTTTGGCATTTTCCCCGCGCTGA...CTGTCGCAGGGGAAAGTGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp AAGCACCTCCTGGGTCCTAAAATCTTTCTGGGCTCTCCTCAAGGACCGGAGAGACACGTGCACAGACAGTaGTCACCCATGGTGACCGCA +
Preference number: 2 (lower is better)
Translates to: KHLLGPKIFLGSPQGPERHVHRQ*SPMVTA
Trigger: TGCGGTCACCATGGGTGAGCACTGTCTGTGCACGTG...TCTCTCCGGTCCTTGAGGAGAGCCCAGAAAGATTTTAGGACCCAGGAGGTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp CCTGATTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCAGGAGGCAGAAGATCCTaGGCTTCTGGTTTTCTGGTG +
Preference number: 2 (lower is better)
Translates to: PDLGQEKGKTWVSQEAGPGGRRS*ASGFLV
Trigger: CACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCC...TGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAATCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR-3UTR TCA 90 bp TCCACCACGACGGAAATCCCCGGAGAATCCAGGCTCAGAAGGACACTGGCAACAAGCTTTGTCTGCACGTaGCCTGGCGGATTTAACACA +
Preference number: 2 (lower is better)
Translates to: STTTEIPGESRLRRTLATSFVCT*PGGFNT
Trigger: TGTGTTAAATCCGCCAGGTCACGTGCAGACAAAGCT...TGTTGCCAGTGTCCTTCTGAGCCTGGATTCTCCGGGGATTTCCGTCGTGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp CACTGCTCTGCGTTGGTTAGGCGACACGACCGTCATACTTACTGGGCCAAATCCGTAGTCCACAGGGTCTaGGTGGAGATATGGAATCGC +
Preference number: 2 (lower is better)
Translates to: HCSALVRRHDRHTYWAKSVVHRV*VEIWNR
Trigger: GCGATTCCATATCTCCACTCAGACCCTGTGGACTAC...GGATTTGGCCCAGTAAGTATGACGGTCGTGTCGCCTAACCAACGCAGAGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp AAGCACCTCCTGGGTCCTAAAATCTTTCTGGGCTCTCCTCAAGGACCGGAGAGAAGTGCTCACCCATGGTaGCCGCAACTGCACAGAGAA +
Preference number: 2 (lower is better)
Translates to: KHLLGPKIFLGSPQGPERSAHPW*PQLHRE
Trigger: TTCTCTGTGCAGTTGCGGTCACCATGGGTGAGCACT...TCTCTCCGGTCCTTGAGGAGAGCCCAGAAAGATTTTAGGACCCAGGAGGTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp GGAGACAGAAGTGACATTTGTGCTGCAAGTCCCTGTTCTTTTGTGGCCACCACAGCTCAGAGGGACTCCTaGTCGGTGACCTGCTGCAGT +
Preference number: 2 (lower is better)
Translates to: GDRSDICAASPCSFVATTAQRDS*SVTCCS
Trigger: ACTGCAGCAGGTCACCGAGCAGGAGTCCCTCTGAGC...TGTGGTGGCCACAAAAGAACAGGGACTTGCAGCACAAATGTCACTTCTGTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp CGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCACGTGCACAGACAGAGGGTTTGGTTTCCTTaGATAAGTTTAAGAAGGCAT +
Preference number: 2 (lower is better)
Translates to: RPPVQWSQPSPPWHVHRQRVWFP*ISLRRH
Trigger: ATGCCTTCTTAAACTTATGCAAGGAAACCAAACCCT...CTGTCTGTGCACGTGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp CACGTGCACAGACAGTGCTCACCCATGGTGACCGCAACTGCACAGAGAAACGCTAGGTCCCCAGGCAGATaGATCAGCCGAACTCTAAAA +
Preference number: 2 (lower is better)
Translates to: HVHRQCSPMVTATAQRNARSPGR*ISRTLK
Trigger: TTTTAGAGTTCGGCTGATGCATCTGCCTGGGGACCT...AGCGTTTCTCTGTGCAGTTGCGGTCACCATGGGTGAGCACTGTCTGTGCACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp CACTGCTCTGCGTTGGTTAGGCGACACGACCGTCATACTTACTGGGCCAAATCCGGGAGCTGCCTGATTTaGGGCAGGAGAAAGGCAAAA +
Preference number: 2 (lower is better)
Translates to: HCSALVRRHDRHTYWAKSGSCLI*GRRKAK
Trigger: TTTTGCCTTTCTCCTGCCCCAAATCAGGCAGCTCCC...GGATTTGGCCCAGTAAGTATGACGGTCGTGTCGCCTAACCAACGCAGAGCAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp CACTGCTCTGCGTTGGTTAGGCGACACGACCGTCATACTTACTGGGCCAAATCCAACCATCTAGTTGCATaGAGATGCCTGCCGGCCTTC +
Preference number: 2 (lower is better)
Translates to: HCSALVRRHDRHTYWAKSNHLVA*RCLPAF
Trigger: GAAGGCCGGCAGGCATCTCCATGCAACTAGATGGTT...GGATTTGGCCCAGTAAGTATGACGGTCGTGTCGCCTAACCAACGCAGAGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp GCTGATGTGAAGTCCATCCACCACGACGGAAATCCCCGGAGAATCCAGGCTCAGCTGCTGCATCATGCCTaGTTCATATGCTGCCAGCTA +
Preference number: 2 (lower is better)
Translates to: ADVKSIHHDGNPRRIQAQLLHHA*FICCQL
Trigger: TAGCTGGCAGCATATGAACCAGGCATGATGCAGCAG...CTGAGCCTGGATTCTCCGGGGATTTCCGTCGTGGTGGATGGACTTCACATCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp GCTGATGTGAAGTCCATCCACCACGACGGAAATCCCCGGAGAATCCAGGCTCAGTCTGCTTGGGAACTGTaGGAGGGTTTGGTTTCCTTG +
Preference number: 2 (lower is better)
Translates to: ADVKSIHHDGNPRRIQAQSAWEL*EGLVSL
Trigger: CAAGGAAACCAAACCCTCCCACAGTTCCCAAGCAGA...CTGAGCCTGGATTCTCCGGGGATTTCCGTCGTGGTGGATGGACTTCACATCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp CATCAAAGAGAGACGGAGAAGAAACGGTACCATCCAGGGAAGGAATGCGGGGCAAGAGTCTTGGGCGCTTaGCTCCACGGGAAGCAAACA +
Preference number: 2 (lower is better)
Translates to: HQRETEKKRYHPGKECGARVLGA*LHGKQT
Trigger: TGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCT...TGCCCCGCATTCCTTCCCTGGATGGTACCGTTTCTTCTCCGTCTCTCTTTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp AGGGAGACAGAAGTGACATTTGTGCTGCAAGTCCCTGTTCTTTTGTGGCCACCACTGCTCCAAGGGAGCTaGCTGATTTGGGGCAGGAGA +
Preference number: 2 (lower is better)
Translates to: RETEVTFVLQVPVLLWPPLLQGS*LIWGRR
Trigger: TCTCCTGCCCCAAATCAGGCAGCTCCCTTGGAGCAG...TGGTGGCCACAAAAGAACAGGGACTTGCAGCACAAATGTCACTTCTGTCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp TTGAAAGTGATGGATGAGTTCCCCACGCTGTGCAGCTCCGTGGTGAAGTTCACTCGCTGCCAGCTGCATTaGAAAGGAGTTGCCACCAAG +
Preference number: 2 (lower is better)
Translates to: LKVMDEFPTLCSSVVKFTRCQLH*KGVATK
Trigger: CTTGGTGGCAACTCCTTTGCAATGCAGCTGGCAGCG...AGTGAACTTCACCACGGAGCTGCACAGCGTGGGGAACTCATCCATCACTTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp CACTGCTCTGCGTTGGTTAGGCGACACGACCGTCATACTTACTGGGCCAAATCCAACAAACCATCTAGTTaGATGGAGATGCCTGCCGGC +
Preference number: 2 (lower is better)
Translates to: HCSALVRRHDRHTYWAKSNKPSS*MEMPAG
Trigger: GCCGGCAGGCATCTCCATGCAACTAGATGGTTTGTT...GGATTTGGCCCAGTAAGTATGACGGTCGTGTCGCCTAACCAACGCAGAGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp CACGTGCACAGACAGTGCTCACCCATGGTGACCGCAACTGCACAGAGAAACGCTATGCATGACTTTAACTaGCACTCCCCAGAAGCGACT +
Preference number: 2 (lower is better)
Translates to: HVHRQCSPMVTATAQRNAMHDFN*HSPEAT
Trigger: AGTCGCTTCTGGGGAGTGCCAGTTAAAGTCATGCAT...AGCGTTTCTCTGTGCAGTTGCGGTCACCATGGGTGAGCACTGTCTGTGCACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp CATTGTTGGCCTAGGGGCTATGGTGGCATCGGGGCACGCATGTCAAATCCACTTCTGCTGCATCATGCCTaGTTCATATGCTGCCAGCTA +
Preference number: 2 (lower is better)
Translates to: HCWPRGYGGIGARMSNPLLLHHA*FICCQL
Trigger: TAGCTGGCAGCATATGAACCAGGCATGATGCAGCAG...AAGTGGATTTGACATGCGTGCCCCGATGCCACCATAGCCCCTAGGCCAACAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp CACTGCTCTGCGTTGGTTAGGCGACACGACCGTCATACTTACTGGGCCAAATCCTCTGCTTGGGAACTGTaGGAGGGTTTGGTTTCCTTG +
Preference number: 2 (lower is better)
Translates to: HCSALVRRHDRHTYWAKSSAWEL*EGLVSL
Trigger: CAAGGAAACCAAACCCTCCCACAGTTCCCAAGCAGA...GGATTTGGCCCAGTAAGTATGACGGTCGTGTCGCCTAACCAACGCAGAGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CAA 90 bp CTGCTTCCAGTGTCTGCTTGGGAACTGTGGGAGGGTTTGGTTTCCTaGCATAAGTTTAAGAAGGCATCTTGGCAGCCACCACAGCGGAAC +
Preference number: 2 (lower is better)
Translates to: LLPVSAWELWEGLVS*HKFKKASWQPPQRN
Trigger: GTTCCGCTGTGGTGGCTGCCAAGATGCCTTCTTAAACTTATGCAAGGAAACCAAACCCTCCCACAGTTCCCAAGCAGACACTGGAAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CAA 90 bp TTCGTCAGCACATCGCTTCAGCCACACAAAAAGCACTGCTCTGCGTaGGTTAGGCGACACGACCGTCATACTTACTGGGCCAAATCCCAT +
Preference number: 2 (lower is better)
Translates to: FVSTSLQPHKKHCSA*VRRHDRHTYWAKSH
Trigger: ATGGGATTTGGCCCAGTAAGTATGACGGTCGTGTCGCCTAACCAACGCAGAGCAGTGCTTTTTGTGTGGCTGAAGCGATGTGCTGACGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp TTGAAAGTGATGGATGAGTTCCCCACGCTGTGCAGCTCCGTGGTGAAGTTCACTAAGTTCCAAGTGGCATaGTGCCCACAGGAAGTAGGC +
Preference number: 2 (lower is better)
Translates to: LKVMDEFPTLCSSVVKFTKFQVA*CPQEVG
Trigger: GCCTACTTCCTGTGGGCATCATGCCACTTGGAACTT...AGTGAACTTCACCACGGAGCTGCACAGCGTGGGGAACTCATCCATCACTTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp CACTGCTCTGCGTTGGTTAGGCGACACGACCGTCATACTTACTGGGCCAAATCCGAGGAAGTGAAGCCTTaGTTCGCCATCTCAATCCAA +
Preference number: 2 (lower is better)
Translates to: HCSALVRRHDRHTYWAKSEEVKP*FAISIQ
Trigger: TTGGATTGAGATGGCGAATCAAGGCTTCACTTCCTC...GGATTTGGCCCAGTAAGTATGACGGTCGTGTCGCCTAACCAACGCAGAGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp CATTGTTGGCCTAGGGGCTATGGTGGCATCGGGGCACGCATGTCAAATCCACTTATGCATGACTTTAACTaGCACTCCCCAGAAGCGACT +
Preference number: 2 (lower is better)
Translates to: HCWPRGYGGIGARMSNPLMHDFN*HSPEAT
Trigger: AGTCGCTTCTGGGGAGTGCCAGTTAAAGTCATGCAT...AAGTGGATTTGACATGCGTGCCCCGATGCCACCATAGCCCCTAGGCCAACAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp GGAGACAGAAGTGACATTTGTGCTGCAAGTCCCTGTTCTTTTGTGGCCACCACACCTTTCCAGCATGAGTaGGGTGAATGCCAGCAGGAG +
Preference number: 2 (lower is better)
Translates to: GDRSDICAASPCSFVATTPFQHE*GECQQE
Trigger: CTCCTGCTGGCATTCACCCCACTCATGCTGGAAAGG...TGTGGTGGCCACAAAAGAACAGGGACTTGCAGCACAAATGTCACTTCTGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp GGAGAGTCTTGGGCGCTTGGCTCCACGGGAAGCAAACACTTTCCCCTGCGACAGAACTGTGGGAGGGTTTaGTTTCCTTGCATAAGTTTA +
Preference number: 2 (lower is better)
Translates to: GESWALGSTGSKHFPLRQNCGRV*FPCISL
Trigger: TAAACTTATGCAAGGAAACCAAACCCTCCCACAGTT...CTGTCGCAGGGGAAAGTGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp GAGAGTCTTGGGCGCTTGGCTCCACGGGAAGCAAACACTTTCCCCTGCGACAGTACCGCAGAATTTTACTaGAACTGTGGAGACTCTAGT +
Preference number: 2 (lower is better)
Translates to: ESLGRLAPREANTFPCDSTAEFY*NCGDSS
Trigger: ACTAGAGTCTCCACAGTTCCAGTAAAATTCTGCGGT...ACTGTCGCAGGGGAAAGTGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CAA 90 bp GAGAAGCCTCTGCTTCCAGTGTCTGCTTGGGAACTGTGGGAGGGTTaGGTTTCCTTGCATAAGTTTAAGAAGGCATCTTGGCAGCCACCA +
Preference number: 2 (lower is better)
Translates to: EKPLLPVSAWELWEG*VSLHKFKKASWQPP
Trigger: TGGTGGCTGCCAAGATGCCTTCTTAAACTTATGCAAGGAAACCAAACCCTCCCACAGTTCCCAAGCAGACACTGGAAGCAGAGGCTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp CACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCCCAGAAGCGACTCTTCTGGTTTTCTGGTaGTACTTAGTGGCTGTACCA +
Preference number: 2 (lower is better)
Translates to: HVWQGLMHDFNWHSPEATLLVFW*YLVAVP
Trigger: TGGTACAGCCACTAAGTATCACCAGAAAACCAGAAG...AGTCGCTTCTGGGGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR-3UTR TCA 90 bp CACTGCTCTGCGTTGGTTAGGCGACACGACCGTCATACTTACTGGGCCAAATCCATATGGAATCGCTCATaGGGATATGGAGATGGCTTC +
Preference number: 2 (lower is better)
Translates to: HCSALVRRHDRHTYWAKSIWNRS*GYGDGF
Trigger: GAAGCCATCTCCATATCCTCATGAGCGATTCCATAT...GGATTTGGCCCAGTAAGTATGACGGTCGTGTCGCCTAACCAACGCAGAGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp AAGCACCTCCTGGGTCCTAAAATCTTTCTGGGCTCTCCTCAAGGACCGGAGAGAGTTAAACTGTCAGGGTaGAGGATACGGAGAGTCTTG +
Preference number: 2 (lower is better)
Translates to: KHLLGPKIFLGSPQGPERVKLSG*RIRRVL
Trigger: CAAGACTCTCCGTATCCTTCACCCTGACAGTTTAAC...TCTCTCCGGTCCTTGAGGAGAGCCCAGAAAGATTTTAGGACCCAGGAGGTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp CCTGATTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCAAAGCGACTGCTGCTGTaGTTTGAAAACATGGAAACA +
Preference number: 2 (lower is better)
Translates to: PDLGQEKGKTWVSQEAGPKRLLL*FENMET
Trigger: TGTTTCCATGTTTTCAAAGCACAGCAGCAGTCGCTT...TGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAATCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR-3UTR GCA 90 bp TTGAAAGTGATGGATGAGTTCCCCACGCTGTGCAGCTCCGTGGTGAAGTTCACTCCCAGAAGCGACTGCTaGTGTGCTTTGAAAACATGG +
Preference number: 2 (lower is better)
Translates to: LKVMDEFPTLCSSVVKFTPRSDC*CALKTW
Trigger: CCATGTTTTCAAAGCACAGCAGCAGTCGCTTCTGGG...AGTGAACTTCACCACGGAGCTGCACAGCGTGGGGAACTCATCCATCACTTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp AGGGAGACAGAAGTGACATTTGTGCTGCAAGTCCCTGTTCTTTTGTGGCCACCAGATGTCGCTGCCAGCTaGATTGCAAAGGAGTTGCCA +
Preference number: 2 (lower is better)
Translates to: RETEVTFVLQVPVLLWPPDVAAS*IAKELP
Trigger: TGGCAACTCCTTTGCAATGCAGCTGGCAGCGACATC...TGGTGGCCACAAAAGAACAGGGACTTGCAGCACAAATGTCACTTCTGTCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp AAATGCTCCATGAAATTGGCCCTACCTTTAAGACAGACGCTGGTGAGAGGTGAACCGGGAGAGAGAGGTTaGAGTGAGCTGAGATTGCGC +
Preference number: 2 (lower is better)
Translates to: KCSMKLALPLRQTLVRGEPGERG*SELRLR
Trigger: GCGCAATCTCAGCTCACTGCAACCTCTCTCTCCCGG...TTCACCTCTCACCAGCGTCTGTCTTAAAGGTAGGGCCAATTTCATGGAGCATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp GAAACGACACCCATCTTCAAAAGGCTGATCAAAATCAACCTTCTAGAGAGGGCAGCTCAGAGGGACTCCTaGTCGGTGACCTGCTGCAGT +
Preference number: 2 (lower is better)
Translates to: ETTPIFKRLIKINLLERAAQRDS*SVTCCS
Trigger: ACTGCAGCAGGTCACCGAGCAGGAGTCCCTCTGAGC...TGCCCTCTCTAGAAGGTTGATTTTGATCAGCCTTTTGAAGATGGGTGTCGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp CATCAAAGAGAGACGGAGAAGAAACGGTACCATCCAGGGAAGGAATGCGGGGCATCAGCGCGGGGAAAATaGCAAAGATCTGGAAATGGA +
Preference number: 2 (lower is better)
Translates to: HQRETEKKRYHPGKECGASARGK*QRSGNG
Trigger: TCCATTTCCAGATCTTTGGCATTTTCCCCGCGCTGA...TGCCCCGCATTCCTTCCCTGGATGGTACCGTTTCTTCTCCGTCTCTCTTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp GCTGATGTGAAGTCCATCCACCACGACGGAAATCCCCGGAGAATCCAGGCTCAGTCAAAGTTTCAGTCCTaGAAACCTTTACCAACACCG +
Preference number: 2 (lower is better)
Translates to: ADVKSIHHDGNPRRIQAQSKFQS*KPLPTP
Trigger: CGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGA...CTGAGCCTGGATTCTCCGGGGATTTCCGTCGTGGTGGATGGACTTCACATCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp AGGGAGACAGAAGTGACATTTGTGCTGCAAGTCCCTGTTCTTTTGTGGCCACCAGAGAAAGGCAAAACGTaGGTGAGCCAAGAAGCAGGC +
Preference number: 2 (lower is better)
Translates to: RETEVTFVLQVPVLLWPPEKGKT*VSQEAG
Trigger: GCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTC...TGGTGGCCACAAAAGAACAGGGACTTGCAGCACAAATGTCACTTCTGTCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp AGGGAGACAGAAGTGACATTTGTGCTGCAAGTCCCTGTTCTTTTGTGGCCACCACTTCCAGTGTCTGCTTaGGAACTGTGGGAGGGTTTG +
Preference number: 2 (lower is better)
Translates to: RETEVTFVLQVPVLLWPPLPVSA*ELWEGL
Trigger: CAAACCCTCCCACAGTTCCCAAGCAGACACTGGAAG...TGGTGGCCACAAAAGAACAGGGACTTGCAGCACAAATGTCACTTCTGTCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CAA 90 bp AGTGGCATGATGCCCACAGGAAGTAGGCGCACTAAGGAGAGGACTTaGGTCCCAAAGAATCATCAAAGAGAGACGGAGAAGAAACGGTAC +
Preference number: 2 (lower is better)
Translates to: SGMMPTGSRRTKERT*VPKNHQRETEKKRY
Trigger: GTACCGTTTCTTCTCCGTCTCTCTTTGATGATTCTTTGGGACCAAAGTCCTCTCCTTAGTGCGCCTACTTCCTGTGGGCATCATGCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp AGGATGTCGCTGCCAGCTGCATTGCAAAGGAGTTGCCACCAAGATGAAACCGCACTTCTGGTTTTCTGGTaGTACTTAGTGGCTGTACCA +
Preference number: 2 (lower is better)
Translates to: RMSLPAALQRSCHQDETALLVFW*YLVAVP
Trigger: TGGTACAGCCACTAAGTATCACCAGAAAACCAGAAG...TGCGGTTTCATCTTGGTGGCAACTCCTTTGCAATGCAGCTGGCAGCGACATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp GAAACGACACCCATCTTCAAAAGGCTGATCAAAATCAACCTTCTAGAGAGGGCAAAGGCAAAACGTGGGTaGGCCAAGAAGCAGGCCCAC +
Preference number: 2 (lower is better)
Translates to: ETTPIFKRLIKINLLERAKAKRG*AKKQAH
Trigger: GTGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTT...TGCCCTCTCTAGAAGGTTGATTTTGATCAGCCTTTTGAAGATGGGTGTCGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp AGCTGTAAGAATGGCCGAGTCAGAACTGGGACCAGACCCTTCTTATTCTTTCTTCACTACAGCATGGCGTaGGGTTTCTTCCTTGGCGAC +
Preference number: 2 (lower is better)
Translates to: SCKNGRVRTGTRPFLFFLHYSMA*GFFLGD
Trigger: GTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTG...AAGAAAGAATAAGAAGGGTCTGGTCCCAGTTCTGACTCGGCCATTCTTACAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp CACTGCTCTGCGTTGGTTAGGCGACACGACCGTCATACTTACTGGGCCAAATCCTTGAAAAGGCCACAGTaGAGGATCATCAAAGAGTCA +
Preference number: 2 (lower is better)
Translates to: HCSALVRRHDRHTYWAKSLKRPQ*RIIKES
Trigger: TGACTCTTTGATGATCCTTCACTGTGGCCTTTTCAA...GGATTTGGCCCAGTAAGTATGACGGTCGTGTCGCCTAACCAACGCAGAGCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp GCATTCAATTTACACCATGACGGTTTCCCAGACATTCATCTTACTCTACTGGCCAGGTGCTGTCAGGTCTaGGCTCACGTAACTGGGGTG +
Preference number: 2 (lower is better)
Translates to: AFNLHHDGFPDIHLTLLARCCQV*AHVTGV
Trigger: CACCCCAGTTACGTGAGCTCAGACCTGACAGCACCT...GGCCAGTAGAGTAAGATGAATGTCTGGGAAACCGTCATGGTGTAAATTGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379713.7
3UTR-3UTR GCA 90 bp AAATGCTCCATGAAATTGGCCCTACCTTTAAGACAGACGCTGGTGAGAGGTGAACATGAGTGGGGTGAATaGCAGCAGGAGACAGTGTGC +
Preference number: 2 (lower is better)
Translates to: KCSMKLALPLRQTLVRGEHEWGE*QQETVC
Trigger: GCACACTGTCTCCTGCTGGCATTCACCCCACTCATG...TTCACCTCTCACCAGCGTCTGTCTTAAAGGTAGGGCCAATTTCATGGAGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp AAGCACCTCCTGGGTCCTAAAATCTTTCTGGGCTCTCCTCAAGGACCGGAGAGAGAAATGTCACAGAAATaGAAGCAGCTCATCAGCCCA +
Preference number: 2 (lower is better)
Translates to: KHLLGPKIFLGSPQGPEREMSQK*KQLISP
Trigger: TGGGCTGATGAGCTGCTTGCATTTCTGTGACATTTC...TCTCTCCGGTCCTTGAGGAGAGCCCAGAAAGATTTTAGGACCCAGGAGGTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp CAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTTAAACAGCTCACAGGCTaGCGGAGGCAGAAGATCCTG +
Preference number: 2 (lower is better)
Translates to: QETLQHGVRFLPWRHSLFKQLTG*RRQKIL
Trigger: CAGGATCTTCTGCCTCCGCCAGCCTGTGAGCTGTTT...AAACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR-3UTR CCA 90 bp AGGGAGACAGAAGTGACATTTGTGCTGCAAGTCCCTGTTCTTTTGTGGCCACCATGGCCGAGTCAGAACTaGGACCAGACCCTTCTTATT +
Preference number: 2 (lower is better)
Translates to: RETEVTFVLQVPVLLWPPWPSQN*DQTLLI
Trigger: AATAAGAAGGGTCTGGTCCCAGTTCTGACTCGGCCA...TGGTGGCCACAAAAGAACAGGGACTTGCAGCACAAATGTCACTTCTGTCTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp ACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTACGTCTGGCAGGGTCTaGTGCATGACTTTAACTGGC +
Preference number: 2 (lower is better)
Translates to: TGNTTAWREVSSLATFFVTSGRV*CMTLTG
Trigger: GCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGT...AACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR-3UTR TCA 90 bp TTGAAAGTGATGGATGAGTTCCCCACGCTGTGCAGCTCCGTGGTGAAGTTCACTCAAGAAGTGAGGAGCTaGAACAAGCTCCATGAGTTT +
Preference number: 2 (lower is better)
Translates to: LKVMDEFPTLCSSVVKFTQEVRS*NKLHEF
Trigger: AAACTCATGGAGCTTGTTTCAGCTCCTCACTTCTTG...AGTGAACTTCACCACGGAGCTGCACAGCGTGGGGAACTCATCCATCACTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp TGTGCTCGTGTGATTACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGCCCAGAAGCGACTGCTaGTGTGCTTTGAAAACATGG +
Preference number: 2 (lower is better)
Translates to: CARVITGNTTAWREVSSLPRSDC*CALKTW
Trigger: CCATGTTTTCAAAGCACAGCAGCAGTCGCTTCTGGG...CAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCACACGAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR-3UTR GCA 90 bp TCCACCACGACGGAAATCCCCGGAGAATCCAGGCTCAGAAGGACACTGGCAACACTATCCATGGGAAACTaGATATATAAATGTGCTCGT +
Preference number: 2 (lower is better)
Translates to: STTTEIPGESRLRRTLATLSMGN*IYKCAR
Trigger: ACGAGCACATTTATATATGCAGTTTCCCATGGATAG...TGTTGCCAGTGTCCTTCTGAGCCTGGATTCTCCGGGGATTTCCGTCGTGGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp TTGAAAGTGATGGATGAGTTCCCCACGCTGTGCAGCTCCGTGGTGAAGTTCACTATTCACTGCTCCTGCTaGATCATGCCTGGTTCATAT +
Preference number: 2 (lower is better)
Translates to: LKVMDEFPTLCSSVVKFTIHCSC*IMPGSY
Trigger: ATATGAACCAGGCATGATGCAGCAGGAGCAGTGAAT...AGTGAACTTCACCACGGAGCTGCACAGCGTGGGGAACTCATCCATCACTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp ACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTGGAGGCAGAAGATCCTaGGCTTCTGGTTTTCTGGTG +
Preference number: 2 (lower is better)
Translates to: TGNTTAWREVSSLATFFVGGRRS*ASGFLV
Trigger: CACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCC...AACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR-3UTR CCA 90 bp CAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTTGGAGGCAGAAGATCCTaGGCTTCTGGTTTTCTGGTG +
Preference number: 2 (lower is better)
Translates to: QETLQHGVRFLPWRHSLFGGRRS*ASGFLV
Trigger: CACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCC...AAACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR-3UTR CCA 90 bp CATCAAAGAGAGACGGAGAAGAAACGGTACCATCCAGGGAAGGAATGCGGGGCAACCGCAGAATTTTACTaGAACTGTGGAGACTCTAGT +
Preference number: 2 (lower is better)
Translates to: HQRETEKKRYHPGKECGATAEFY*NCGDSS
Trigger: ACTAGAGTCTCCACAGTTCCAGTAAAATTCTGCGGT...TGCCCCGCATTCCTTCCCTGGATGGTACCGTTTCTTCTCCGTCTCTCTTTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp GAAACGACACCCATCTTCAAAAGGCTGATCAAAATCAACCTTCTAGAGAGGGCACATGCCTGGTTCATATaGTGCCAGCTAGGGCAGAAC +
Preference number: 2 (lower is better)
Translates to: ETTPIFKRLIKINLLERAHAWFI*CQLGQN
Trigger: GTTCTGCCCTAGCTGGCAGCATATGAACCAGGCATG...TGCCCTCTCTAGAAGGTTGATTTTGATCAGCCTTTTGAAGATGGGTGTCGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp GGAGACAGAAGTGACATTTGTGCTGCAAGTCCCTGTTCTTTTGTGGCCACCACAGAAATGTCACAGAAATaGAAGCAGCTCATCAGCCCA +
Preference number: 2 (lower is better)
Translates to: GDRSDICAASPCSFVATTEMSQK*KQLISP
Trigger: TGGGCTGATGAGCTGCTTGCATTTCTGTGACATTTC...TGTGGTGGCCACAAAAGAACAGGGACTTGCAGCACAAATGTCACTTCTGTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp TCAAATACAACAGGAACAGCTGAGCTTGAAAAGGCCACAGTGAAGGATCATCAAAAACAGCTCACAGGCTaGCGGAGGCAGAAGATCCTG +
Preference number: 2 (lower is better)
Translates to: SNTTGTAELEKATVKDHQKQLTG*RRQKIL
Trigger: CAGGATCTTCTGCCTCCGCCAGCCTGTGAGCTGTTT...TTGATGATCCTTCACTGTGGCCTTTTCAAGCTCAGCTGTTCCTGTTGTATTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp GAAACGACACCCATCTTCAAAAGGCTGATCAAAATCAACCTTCTAGAGAGGGCAAACCATCTAGTTGCATaGAGATGCCTGCCGGCCTTC +
Preference number: 2 (lower is better)
Translates to: ETTPIFKRLIKINLLERANHLVA*RCLPAF
Trigger: GAAGGCCGGCAGGCATCTCCATGCAACTAGATGGTT...TGCCCTCTCTAGAAGGTTGATTTTGATCAGCCTTTTGAAGATGGGTGTCGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp TTGAAAGTGATGGATGAGTTCCCCACGCTGTGCAGCTCCGTGGTGAAGTTCACTCGGGGCATCACTTTTTaGTGTTTAGACCATGACATT +
Preference number: 2 (lower is better)
Translates to: LKVMDEFPTLCSSVVKFTRGITF*CLDHDI
Trigger: AATGTCATGGTCTAAACACCAAAAAGTGATGCCCCG...AGTGAACTTCACCACGGAGCTGCACAGCGTGGGGAACTCATCCATCACTTTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CAA 90 bp AGAGCTTTAGCACATGTTTTTATAAGGATGTCGCTGCCAGCTGCATaGCAAAGGAGTTGCCACCAAGATGAAACCGCAAGTGCCACTCAA +
Preference number: 2 (lower is better)
Translates to: RALAHVFIRMSLPAA*QRSCHQDETASATQ
Trigger: TTGAGTGGCACTTGCGGTTTCATCTTGGTGGCAACTCCTTTGCAATGCAGCTGGCAGCGACATCCTTATAAAAACATGTGCTAAAGCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp GTGATTACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCCTTCTGGTTTTCTGGTaGTACTTAGTGGCTGTACCA +
Preference number: 2 (lower is better)
Translates to: VITGNTTAWREVSSLATFLLVFW*YLVAVP
Trigger: TGGTACAGCCACTAAGTATCACCAGAAAACCAGAAG...GAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR-3UTR TCA 90 bp CATCAAAGAGAGACGGAGAAGAAACGGTACCATCCAGGGAAGGAATGCGGGGCATTTCCAAAATCCCACTaGGAATCATATCTGGAAATG +
Preference number: 2 (lower is better)
Translates to: HQRETEKKRYHPGKECGAFPKSH*ESYLEM
Trigger: CATTTCCAGATATGATTCTCAGTGGGATTTTGGAAA...TGCCCCGCATTCCTTCCCTGGATGGTACCGTTTCTTCTCCGTCTCTCTTTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp GAAACGACACCCATCTTCAAAAGGCTGATCAAAATCAACCTTCTAGAGAGGGCAAGCGATGGGCTGTCATaGTTCAAGTTGAGGTGGCAT +
Preference number: 2 (lower is better)
Translates to: ETTPIFKRLIKINLLERASDGLS*FKLRWH
Trigger: ATGCCACCTCAACTTGAATCATGACAGCCCATCGCT...TGCCCTCTCTAGAAGGTTGATTTTGATCAGCCTTTTGAAGATGGGTGTCGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp GAAACGACACCCATCTTCAAAAGGCTGATCAAAATCAACCTTCTAGAGAGGGCAATGAGGATATGGAGATaGCTTCTGGTCCAAGAGGCC +
Preference number: 2 (lower is better)
Translates to: ETTPIFKRLIKINLLERAMRIWR*LLVQEA
Trigger: GGCCTCTTGGACCAGAAGCCATCTCCATATCCTCAT...TGCCCTCTCTAGAAGGTTGATTTTGATCAGCCTTTTGAAGATGGGTGTCGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CAA 90 bp CGTGTGATTACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTaGGCGACATTCTTTGTTTTCAAAGAATGCAGTCCTCATCTGAGG +
Preference number: 2 (lower is better)
Translates to: RVITGNTTAWREVSS*ATFFVFKECSPHLR
Trigger: CCTCAGATGAGGACTGCATTCTTTGAAAACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCACACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR CAA 90 bp TCAAATACTGTGTCTGACTCCAACTTGGATCAAATGACTCTAATTTaGAAAGTGATGGATGAGTTCCCCACGCTGTGCAGCTCCGTGGTG +
Preference number: 2 (lower is better)
Translates to: SNTVSDSNLDQMTLI*KVMDEFPTLCSSVV
Trigger: CACCACGGAGCTGCACAGCGTGGGGAACTCATCCATCACTTTCAAAATTAGAGTCATTTGATCCAAGTTGGAGTCAGACACAGTATTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CAA 90 bp ATCAGTCACCTAAGTAATTCAGGACAAAAGAGGAAGGGAGGCTATTaGGATGGCAGTGTCTGCAGAAAGCACGCATCTGCTGAAGGATAT +
Preference number: 2 (lower is better)
Translates to: ISHLSNSGQKRKGGY*DGSVCRKHASAEGY
Trigger: ATATCCTTCAGCAGATGCGTGCTTTCTGCAGACACTGCCATCCAAATAGCCTCCCTTCCTCTTTTGTCCTGAATTACTTAGGTGACTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379713.7
3UTR-3UTR TCA 90 bp TGGCATAAGACAGAAGGCAAATCTCAGAACTTGCCAAATACAACACTCAAAATTTCCAAGGGAGCTGCCTaGTTTGGGGCAGGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: WHKTEGKSQNLPNTTLKISKGAA*FGAGER
Trigger: CCTTTCTCCTGCCCCAAATCAGGCAGCTCCCTTGGA...AATTTTGAGTGTTGTATTTGGCAAGTTCTGAGATTTGCCTTCTGTCTTATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp TGTGCTCGTGTGATTACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGAAGCGACTGCTGCTGTaGTTTGAAAACATGGAAACA +
Preference number: 2 (lower is better)
Translates to: CARVITGNTTAWREVSSLKRLLL*FENMET
Trigger: TGTTTCCATGTTTTCAAAGCACAGCAGCAGTCGCTT...CAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCACACGAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR-3UTR GCA 90 bp CATCAAAGAGAGACGGAGAAGAAACGGTACCATCCAGGGAAGGAATGCGGGGCATTTGTTTTCAAAGAATaGAGTCCTCATCTGAGGAAA +
Preference number: 2 (lower is better)
Translates to: HQRETEKKRYHPGKECGAFVFKE*SPHLRK
Trigger: TTTCCTCAGATGAGGACTGCATTCTTTGAAAACAAA...TGCCCCGCATTCCTTCCCTGGATGGTACCGTTTCTTCTCCGTCTCTCTTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp TTAACTGGCACTCCCCAGAAGCGACTGCTGCTGTGCTTTGAAAACATGGAAACATCAAAGTTTCAGTCCTaGAAACCTTTACCAACACCG +
Preference number: 2 (lower is better)
Translates to: LTGTPQKRLLLCFENMETSKFQS*KPLPTP
Trigger: CGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGA...TGTTTCCATGTTTTCAAAGCACAGCAGCAGTCGCTTCTGGGGAGTGCCAGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR-3UTR CCA 90 bp TGGCATAAGACAGAAGGCAAATCTCAGAACTTGCCAAATACAACACTCAAAATTAAGCAGGCCCACGTCTaGCAGGGTCTGATGCATGAC +
Preference number: 2 (lower is better)
Translates to: WHKTEGKSQNLPNTTLKIKQAHV*QGLMHD
Trigger: GTCATGCATCAGACCCTGCCAGACGTGGGCCTGCTT...AATTTTGAGTGTTGTATTTGGCAAGTTCTGAGATTTGCCTTCTGTCTTATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp GAAACGACACCCATCTTCAAAAGGCTGATCAAAATCAACCTTCTAGAGAGGGCAACTGCTGCTGTGCTTTaGAAACATGGAAACAGCTCA +
Preference number: 2 (lower is better)
Translates to: ETTPIFKRLIKINLLERATAAVL*KHGNSS
Trigger: TGAGCTGTTTCCATGTTTTCAAAGCACAGCAGCAGT...TGCCCTCTCTAGAAGGTTGATTTTGATCAGCCTTTTGAAGATGGGTGTCGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp TTTCAAAGGGTTTGGGTTGGTTTATGTTTGAGGGTGGTGGGAGAGGTTCGTGTGAGTTGTTTCATTTCGTaGCGGTCTCGAAGAAGTTTT +
Preference number: 2 (lower is better)
Translates to: FQRVWVGLCLRVVGEVRVSCFIS*RSRRSF
Trigger: AAAACTTCTTCGAGACCGTCACGAAATGAAACAACT...CACACGAACCTCTCCCACCACCCTCAAACATAAACCAACCCAAACCCTTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379711.2
3UTR-3UTR CCA 90 bp TGGCATAAGACAGAAGGCAAATCTCAGAACTTGCCAAATACAACACTCAAAATTAGAGTCTTGGGCGCTTaGCTCCACGGGAAGCAAACA +
Preference number: 2 (lower is better)
Translates to: WHKTEGKSQNLPNTTLKIRVLGA*LHGKQT
Trigger: TGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCT...AATTTTGAGTGTTGTATTTGGCAAGTTCTGAGATTTGCCTTCTGTCTTATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp TCAAATACAACAGGAACAGCTGAGCTTGAAAAGGCCACAGTGAAGGATCATCAAACTGCTGCTGTGCTTTaGAAACATGGAAACAGCTCA +
Preference number: 2 (lower is better)
Translates to: SNTTGTAELEKATVKDHQTAAVL*KHGNSS
Trigger: TGAGCTGTTTCCATGTTTTCAAAGCACAGCAGCAGT...TTGATGATCCTTCACTGTGGCCTTTTCAAGCTCAGCTGTTCCTGTTGTATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp GCATTCAATTTACACCATGACGGTTTCCCAGACATTCATCTTACTCTACTGGCCCATACTTTGATTATGTaGCGAAGGCATGAGTGTGTG +
Preference number: 2 (lower is better)
Translates to: AFNLHHDGFPDIHLTLLAHTLIM*RRHECV
Trigger: CACACACTCATGCCTTCGTCACATAATCAAAGTATG...GGCCAGTAGAGTAAGATGAATGTCTGGGAAACCGTCATGGTGTAAATTGAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379713.7
3UTR-3UTR GCA 90 bp TGGCATAAGACAGAAGGCAAATCTCAGAACTTGCCAAATACAACACTCAAAATTGCTCCTGCTGCATCATaGCTGGTTCATATGCTGCCA +
Preference number: 2 (lower is better)
Translates to: WHKTEGKSQNLPNTTLKIAPAAS*LVHMLP
Trigger: TGGCAGCATATGAACCAGGCATGATGCAGCAGGAGC...AATTTTGAGTGTTGTATTTGGCAAGTTCTGAGATTTGCCTTCTGTCTTATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp GAAACGACACCCATCTTCAAAAGGCTGATCAAAATCAACCTTCTAGAGAGGGCAGGGTCTAGAAAAGACTaGGTAGAGTTTGTCTCTACA +
Preference number: 2 (lower is better)
Translates to: ETTPIFKRLIKINLLERAGSRKD*VEFVST
Trigger: TGTAGAGACAAACTCTACCCAGTCTTTTCTAGACCC...TGCCCTCTCTAGAAGGTTGATTTTGATCAGCCTTTTGAAGATGGGTGTCGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CCA 90 bp CAGACAGATAATTCTAATACAGAGCATTCAATTTACACCATGACGGTTTCCCAGGGGAGGCTATTTGGATaGCAGTGTCTGCAGAAAGCA +
Preference number: 2 (lower is better)
Translates to: QTDNSNTEHSIYTMTVSQGRLFG*QCLQKA
Trigger: TGCTTTCTGCAGACACTGCCATCCAAATAGCCTCCC...CTGGGAAACCGTCATGGTGTAAATTGAATGCTCTGTATTAGAATTATCTGTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379713.7
3UTR-3UTR TCA 90 bp TGGCATAAGACAGAAGGCAAATCTCAGAACTTGCCAAATACAACACTCAAAATTTTTGAAAGTGATGGATaGGTTCCCCACGCTGTGCAG +
Preference number: 2 (lower is better)
Translates to: WHKTEGKSQNLPNTTLKIFESDG*VPHAVQ
Trigger: CTGCACAGCGTGGGGAACTCATCCATCACTTTCAAA...AATTTTGAGTGTTGTATTTGGCAAGTTCTGAGATTTGCCTTCTGTCTTATGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp GTGATTACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTTTCAAAGAATaGAGTCCTCATCTGAGGAAA +
Preference number: 2 (lower is better)
Translates to: VITGNTTAWREVSSLATFFVFKE*SPHLRK
Trigger: TTTCCTCAGATGAGGACTGCATTCTTTGAAAACAAA...GAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR-3UTR GCA 90 bp GAAACGACACCCATCTTCAAAAGGCTGATCAAAATCAACCTTCTAGAGAGGGCAACACACACAGAAAAATaGTCCATGAAATTGGCCCTA +
Preference number: 2 (lower is better)
Translates to: ETTPIFKRLIKINLLERATHTEK*SMKLAL
Trigger: TAGGGCCAATTTCATGGAGCATTTTTCTGTGTGTGT...TGCCCTCTCTAGAAGGTTGATTTTGATCAGCCTTTTGAAGATGGGTGTCGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp GCATTCAATTTACACCATGACGGTTTCCCAGACATTCATCTTACTCTACTGGCCTTACTTATGACACAGTaGCTTTCTCTTCCTGTTCCA +
Preference number: 2 (lower is better)
Translates to: AFNLHHDGFPDIHLTLLALLMTQ*LSLPVP
Trigger: TGGAACAGGAAGAGAAAGGCACTGTGTCATAAGTAA...GGCCAGTAGAGTAAGATGAATGTCTGGGAAACCGTCATGGTGTAAATTGAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379713.7
3UTR-3UTR CCA 90 bp TGGCATAAGACAGAAGGCAAATCTCAGAACTTGCCAAATACAACACTCAAAATTATGAGGATATGGAGATaGCTTCTGGTCCAAGAGGCC +
Preference number: 2 (lower is better)
Translates to: WHKTEGKSQNLPNTTLKIMRIWR*LLVQEA
Trigger: GGCCTCTTGGACCAGAAGCCATCTCCATATCCTCAT...AATTTTGAGTGTTGTATTTGGCAAGTTCTGAGATTTGCCTTCTGTCTTATGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR TCA 90 bp CAGACAGATAATTCTAATACAGAGCATTCAATTTACACCATGACGGTTTCCCAGAAAGCACGCATCTGCTaGAGGATATATGCAAAGGTG +
Preference number: 2 (lower is better)
Translates to: QTDNSNTEHSIYTMTVSQKARIC*RIYAKV
Trigger: CACCTTTGCATATATCCTTCAGCAGATGCGTGCTTT...CTGGGAAACCGTCATGGTGTAAATTGAATGCTCTGTATTAGAATTATCTGTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379713.7
3UTR-3UTR TCA 90 bp CAGACAGATAATTCTAATACAGAGCATTCAATTTACACCATGACGGTTTCCCAGAATGCTCTCATACTTTaGTTATGTGACGAAGGCATG +
Preference number: 2 (lower is better)
Translates to: QTDNSNTEHSIYTMTVSQNALIL*LCDEGM
Trigger: CATGCCTTCGTCACATAATCAAAGTATGAGAGCATT...CTGGGAAACCGTCATGGTGTAAATTGAATGCTCTGTATTAGAATTATCTGTCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379713.7
3UTR-3UTR GCA 90 bp ATTAAAATTTCCTTGGCTACACTGAAATACGATCTGCCATTTCTCCTCTTGTTTCTGCTGAAGGATATATaGAAAGGTGCTGTCAGGTCT +
Preference number: 2 (lower is better)
Translates to: IKISLATLKYDLPFLLLFLLKDI*KGAVRS
Trigger: AGACCTGACAGCACCTTTGCATATATCCTTCAGCAG...AAACAAGAGGAGAAATGGCAGATCGTATTTCAGTGTAGCCAAGGAAATTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379713.7
3UTR-3UTR TCA 90 bp TGGCATAAGACAGAAGGCAAATCTCAGAACTTGCCAAATACAACACTCAAAATTTTTCCAAAATCCCACTaGGAATCATATCTGGAAATG +
Preference number: 2 (lower is better)
Translates to: WHKTEGKSQNLPNTTLKIFPKSH*ESYLEM
Trigger: CATTTCCAGATATGATTCTCAGTGGGATTTTGGAAA...AATTTTGAGTGTTGTATTTGGCAAGTTCTGAGATTTGCCTTCTGTCTTATGCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR GCA 90 bp ATTAAAATTTCCTTGGCTACACTGAAATACGATCTGCCATTTCTCCTCTTGTTTGGGAAGTTTCATCAATaGCATTCAAATCAGTCACCT +
Preference number: 2 (lower is better)
Translates to: IKISLATLKYDLPFLLLFGKFHQ*HSNQSP
Trigger: AGGTGACTGATTTGAATGGCATTGATGAAACTTCCC...AAACAAGAGGAGAAATGGCAGATCGTATTTCAGTGTAGCCAAGGAAATTTTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379713.7
3UTR-3UTR CAA 90 bp CGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCACGTGCACAGACAGAGGCAGGAGAATCACTaGAACCCGGGAGAGAGAGGT +
Preference number: 3 (lower is better)
Translates to: RPPVQWSQPSPPWHVHRQRQENH*NPGERG
Trigger: ACCTCTCTCTCCCGGGTTCAAGTGATTCTCCTGCCT...CTGTCTGTGCACGTGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR GCA 72 bp CAGCATGAGTGGGGTGAATGCCAGCAGGAGACAGTGTaGTCACCACCGCACCCTCAGGGTCCACACCTGTCA +
Preference number: 3 (lower is better)
Translates to: QHEWGECQQETV*SPPHPQGPHLS
Trigger: TGACAGGTGTGGACCCTGAGGGTGCGGTGGTGAGCACACTGTCTCCTGCTGGCATTCACCCCACTCATGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 72 bp GAGCTGCCTGATTTGGGGCAGGAGAAAGGCAAAACGTaGGTGAGCCAAGAAGCAGGCCCACGTCTGGCAGGG +
Preference number: 3 (lower is better)
Translates to: ELPDLGQEKGKT*VSQEAGPRLAG
Trigger: CCCTGCCAGACGTGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAATCAGGCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR CCA 72 bp TCCCCTGCGACAGTGGCTGTATCCTTCCTGAGCTCCTaGCGGGCCACACACTCTAGCTTCCTAGATGGGCTC +
Preference number: 3 (lower is better)
Translates to: SPATVAVSFLSS*RATHSSFLDGL
Trigger: GAGCCCATCTAGGAAGCTAGAGTGTGTGGCCCGCCAGGAGCTCAGGAAGGATACAGCCACTGTCGCAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 72 bp TCAAGGACCGGAGAGATGGCACAGAGACAACTTTCATaGCGACGCCAGGCTGCGCCCTCCTGTGCAGTGGTC +
Preference number: 3 (lower is better)
Translates to: SRTGEMAQRQLS*RRQAAPSCAVV
Trigger: GACCACTGCACAGGAGGGCGCAGCCTGGCGTCGCCATGAAAGTTGTCTCTGTGCCATCTCTCCGGTCCTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR GCA 72 bp AGAAGGGACGCTCAGAGGGACTCCTGCTCGGTGACCTaGTGCAGTGATCCTTCTAAGGGGGACGTAGCTGGT +
Preference number: 3 (lower is better)
Translates to: RRDAQRDSCSVT*CSDPSKGDVAG
Trigger: ACCAGCTACGTCCCCCTTAGAAGGATCACTGCAGCAGGTCACCGAGCAGGAGTCCCTCTGAGCGTCCCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR GCA 72 bp GCAGAACGAGACAGAAGGGACGCTCAGAGGGACTCCTaGTCGGTGACCTGCTGCAGTGATCCTTCTAAGGGG +
Preference number: 3 (lower is better)
Translates to: AERDRRDAQRDS*SVTCCSDPSKG
Trigger: CCCCTTAGAAGGATCACTGCAGCAGGTCACCGAGCAGGAGTCCCTCTGAGCGTCCCTTCTGTCTCGTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR GCA 72 bp TCCCAGCCATCTCCTCCCTGGCACGTGCACAGACAGTaGTCACCCATGGTGACCGCAACTGCACAGAGAAAC +
Preference number: 3 (lower is better)
Translates to: SQPSPPWHVHRQ*SPMVTATAQRN
Trigger: GTTTCTCTGTGCAGTTGCGGTCACCATGGGTGAGCACTGTCTGTGCACGTGCCAGGGAGGAGATGGCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CAA 90 bp GCTGATGTGAAGTCCATCCACCACGACGGAAATCCCCGGAGAATCCAGGCTCAGGAGAGTCTTGGGCGCTaGGCTCCACGGGAAGCAAAC +
Preference number: 3 (lower is better)
Translates to: ADVKSIHHDGNPRRIQAQESLGR*APREAN
Trigger: GTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTC...CTGAGCCTGGATTCTCCGGGGATTTCCGTCGTGGTGGATGGACTTCACATCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CAA 90 bp CGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCACGTGCACAGACAGCGTGAGGTTTCTTCCTaGGCGACATTCTTTGTTTTC +
Preference number: 3 (lower is better)
Translates to: RPPVQWSQPSPPWHVHRQREVSS*ATFFVF
Trigger: GAAAACAAAGAATGTCGCCAAGGAAGAAACCTCACG...CTGTCTGTGCACGTGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR TCA 72 bp GGTGAGCCAAGAAGCAGGCCCACGTCTGGCAGGGTCTaGTGCATGACTTTAACTGGCACTCCCCAGAAGCGA +
Preference number: 3 (lower is better)
Translates to: GEPRSRPTSGRV*CMTLTGTPQKR
Trigger: TCGCTTCTGGGGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTGGGCCTGCTTCTTGGCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR-3UTR CAA 90 bp TCCACCACGACGGAAATCCCCGGAGAATCCAGGCTCAGAAGGACACTGGCAACAGCTTCCAGTGTCTGCTaGGGAACTGTGGGAGGGTTT +
Preference number: 3 (lower is better)
Translates to: STTTEIPGESRLRRTLATASSVC*GTVGGF
Trigger: AAACCCTCCCACAGTTCCCAAGCAGACACTGGAAGC...TGTTGCCAGTGTCCTTCTGAGCCTGGATTCTCCGGGGATTTCCGTCGTGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CAA 90 bp TTGAAAGTGATGGATGAGTTCCCCACGCTGTGCAGCTCCGTGGTGAAGTTCACTAGGATACGGAGAGTCTaGGGCGCTTGGCTCCACGGG +
Preference number: 3 (lower is better)
Translates to: LKVMDEFPTLCSSVVKFTRIRRV*GAWLHG
Trigger: CCCGTGGAGCCAAGCGCCCAAGACTCTCCGTATCCT...AGTGAACTTCACCACGGAGCTGCACAGCGTGGGGAACTCATCCATCACTTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR TCA 72 bp CCTCATCTGAGGAAACCCTGCTCCAAGGGAGCTGCCTaGTTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAG +
Preference number: 3 (lower is better)
Translates to: PHLRKPCSKGAA*FGAGERQNVGE
Trigger: CTCACCCACGTTTTGCCTTTCTCCTGCCCCAAATCAGGCAGCTCCCTTGGAGCAGGGTTTCCTCAGATGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR TCA 72 bp GCTGCCAGCTGCATTGCAAAGGAGTTGCCACCAAGATaGAACCGCAAGTGCCACTCAACCAGGGTCACACGC +
Preference number: 3 (lower is better)
Translates to: AASCIAKELPPR*NRKCHSTRVTR
Trigger: GCGTGTGACCCTGGTTGAGTGGCACTTGCGGTTTCATCTTGGTGGCAACTCCTTTGCAATGCAGCTGGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR GCA 72 bp CAGTCCTCATCTGAGGAAACCCTGCTCCAAGGGAGCTaGCTGATTTGGGGCAGGAGAAAGGCAAAACGTGGG +
Preference number: 3 (lower is better)
Translates to: QSSSEETLLQGS*LIWGRRKAKRG
Trigger: CCCACGTTTTGCCTTTCTCCTGCCCCAAATCAGGCAGCTCCCTTGGAGCAGGGTTTCCTCAGATGAGGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR GCA 72 bp TCACTGCTCCTGCTGCATCATGCCTGGTTCATATGCTaGCAGCTAGGGCAGAACGAGACAGAAGGGACGCTC +
Preference number: 3 (lower is better)
Translates to: SLLLLHHAWFIC*QLGQNETEGTL
Trigger: GAGCGTCCCTTCTGTCTCGTTCTGCCCTAGCTGGCAGCATATGAACCAGGCATGATGCAGCAGGAGCAGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 72 bp TTTTCACACCATCATCCAAGGTACTGGCGAACAGTCTaGCGTTCCCTCCACCCCATCCTTGCCCAGCCCATG +
Preference number: 3 (lower is better)
Translates to: FSHHHPRYWRTV*RSLHPILAQPM
Trigger: CATGGGCTGGGCAAGGATGGGGTGGAGGGAACGCCAGACTGTTCGCCAGTACCTTGGATGATGGTGTGAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379713.7
3UTR-3UTR CAA 90 bp GGAGAGTCTTGGGCGCTTGGCTCCACGGGAAGCAAACACTTTCCCCTGCGACAGGACTGCTGCTGTGCTTaGAAAACATGGAAACAGCTC +
Preference number: 3 (lower is better)
Translates to: GESWALGSTGSKHFPLRQDCCCA*KTWKQL
Trigger: GAGCTGTTTCCATGTTTTCAAAGCACAGCAGCAGTC...CTGTCGCAGGGGAAAGTGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CAA 90 bp CACTGCTCTGCGTTGGTTAGGCGACACGACCGTCATACTTACTGGGCCAAATCCTCGCTGCCAGCTGCATaGCAAAGGAGTTGCCACCAA +
Preference number: 3 (lower is better)
Translates to: HCSALVRRHDRHTYWAKSSLPAA*QRSCHQ
Trigger: TTGGTGGCAACTCCTTTGCAATGCAGCTGGCAGCGA...GGATTTGGCCCAGTAAGTATGACGGTCGTGTCGCCTAACCAACGCAGAGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CAA 90 bp CACGTGCACAGACAGTGCTCACCCATGGTGACCGCAACTGCACAGAGAAACGCTCAAGTCCCTGTTCTTTaGTGGCCACCACATTCCCTC +
Preference number: 3 (lower is better)
Translates to: HVHRQCSPMVTATAQRNAQVPVL*WPPHSL
Trigger: GAGGGAATGTGGTGGCCACAAAAGAACAGGGACTTG...AGCGTTTCTCTGTGCAGTTGCGGTCACCATGGGTGAGCACTGTCTGTGCACGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR TCA 72 bp CTCCCTGGCACGTGCACAGACAGTGCTCACCCATGGTaGCCGCAACTGCACAGAGAAACGCTGAAGTTAAAC +
Preference number: 3 (lower is better)
Translates to: LPGTCTDSAHPW*PQLHRETLKLN
Trigger: GTTTAACTTCAGCGTTTCTCTGTGCAGTTGCGGTCACCATGGGTGAGCACTGTCTGTGCACGTGCCAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR GCA 72 bp GATTCACTGCTCCTGCTGCATCATGCCTGGTTCATATaGTGCCAGCTAGGGCAGAACGAGACAGAAGGGACG +
Preference number: 3 (lower is better)
Translates to: DSLLLLHHAWFI*CQLGQNETEGT
Trigger: CGTCCCTTCTGTCTCGTTCTGCCCTAGCTGGCAGCATATGAACCAGGCATGATGCAGCAGGAGCAGTGAATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CAA 90 bp GCTGATGTGAAGTCCATCCACCACGACGGAAATCCCCGGAGAATCCAGGCTCAGCCAAGATCTCAGAGTTaGTTCTCAGCGAAACCAGGG +
Preference number: 3 (lower is better)
Translates to: ADVKSIHHDGNPRRIQAQPRSQS*FSAKPG
Trigger: CCCTGGTTTCGCTGAGAACAAACTCTGAGATCTTGG...CTGAGCCTGGATTCTCCGGGGATTTCCGTCGTGGTGGATGGACTTCACATCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR TCA 72 bp CCAGCCAACTCTCGCAGCCACAGCTTTGTCTGCACGTaGCCTGGCGGATTTAACACAACTGCCCAGGAAATT +
Preference number: 3 (lower is better)
Translates to: PANSRSHSFVCT*PGGFNTTAQEI
Trigger: AATTTCCTGGGCAGTTGTGTTAAATCCGCCAGGTCACGTGCAGACAAAGCTGTGGCTGCGAGAGTTGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR GCA 72 bp CCGCAGAGAGTTCAAAACTTGAGCTTAAAGGAGAGATaGCCGGGGCAAGCCAGCCACAGATCCCAGAGACAT +
Preference number: 3 (lower is better)
Translates to: PQRVQNLSLKER*PGQASHRSQRH
Trigger: ATGTCTCTGGGATCTGTGGCTGGCTTGCCCCGGGCATCTCTCCTTTAAGCTCAAGTTTTGAACTCTCTGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 72 bp CTGACTCCAGATTCACTGCTCCTGCTGCATCATGCCTaGTTCATATGCTGCCAGCTAGGGCAGAACGAGACA +
Preference number: 3 (lower is better)
Translates to: LTPDSLLLLHHA*FICCQLGQNET
Trigger: TGTCTCGTTCTGCCCTAGCTGGCAGCATATGAACCAGGCATGATGCAGCAGGAGCAGTGAATCTGGAGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 72 bp AAAATCTTTCTGGGCTCTCCTCAAGGACCGGAGAGATaGCACAGAGACAACTTTCATGGCGACGCCAGGCTG +
Preference number: 3 (lower is better)
Translates to: KIFLGSPQGPER*HRDNFHGDARL
Trigger: CAGCCTGGCGTCGCCATGAAAGTTGTCTCTGTGCCATCTCTCCGGTCCTTGAGGAGAGCCCAGAAAGATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 72 bp TGGAGGAAAAGCACCTCCTGGGTCCTAAAATCTTTCTaGGCTCTCCTCAAGGACCGGAGAGATGGCACAGAG +
Preference number: 3 (lower is better)
Translates to: WRKSTSWVLKSF*ALLKDRRDGTE
Trigger: CTCTGTGCCATCTCTCCGGTCCTTGAGGAGAGCCCAGAAAGATTTTAGGACCCAGGAGGTGCTTTTCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 72 bp CATCGCTTCAGCCACACAAAAAGCACTGCTCTGCGTTaGTTAGGCGACACGACCGTCATACTTACTGGGCCA +
Preference number: 3 (lower is better)
Translates to: HRFSHTKSTALR*LGDTTVILTGP
Trigger: TGGCCCAGTAAGTATGACGGTCGTGTCGCCTAACCAACGCAGAGCAGTGCTTTTTGTGTGGCTGAAGCGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CAA 90 bp GAGAGTCTTGGGCGCTTGGCTCCACGGGAAGCAAACACTTTCCCCTGCGACAGTAATCGTTTGACAGAGTaGAACTCCACAAGACTGAGC +
Preference number: 3 (lower is better)
Translates to: ESLGRLAPREANTFPCDSNRLTE*NSTRLS
Trigger: GCTCAGTCTTGTGGAGTTCAACTCTGTCAAACGATT...ACTGTCGCAGGGGAAAGTGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR GCA 72 bp GGCATCTCTTTCTCAGGGTTTTCAAACGGCGCAGACTaGAGAGTCTCCCGGGCCAGTTCCAATAAGTTCCAA +
Preference number: 3 (lower is better)
Translates to: GISFSGFSNGAD*RVSRASSNKFQ
Trigger: TTGGAACTTATTGGAACTGGCCCGGGAGACTCTGCAGTCTGCGCCGTTTGAAAACCCTGAGAAAGAGATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR GCA 72 bp TTCGTCAGCACATCGCTTCAGCCACACAAAAAGCACTaGTCTGCGTTGGTTAGGCGACACGACCGTCATACT +
Preference number: 3 (lower is better)
Translates to: FVSTSLQPHKKH*SALVRRHDRHT
Trigger: AGTATGACGGTCGTGTCGCCTAACCAACGCAGAGCAGTGCTTTTTGTGTGGCTGAAGCGATGTGCTGACGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 72 bp CTCAGAGTTTGTTCTCAGCGAAACCAGGGTGCCAAGTaGCTGACTCCAGATTCACTGCTCCTGCTGCATCAT +
Preference number: 3 (lower is better)
Translates to: LRVCSQRNQGAK*LTPDSLLLLHH
Trigger: ATGATGCAGCAGGAGCAGTGAATCTGGAGTCAGCCACTTGGCACCCTGGTTTCGCTGAGAACAAACTCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 72 bp AGTGGAGATATGGAATCGCTCATGAGGATATGGAGATaGCTTCTGGTCCAAGAGGCCAGCCAACTCTCGCAG +
Preference number: 3 (lower is better)
Translates to: SGDMESLMRIWR*LLVQEASQLSQ
Trigger: CTGCGAGAGTTGGCTGGCCTCTTGGACCAGAAGCCATCTCCATATCCTCATGAGCGATTCCATATCTCCACT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 72 bp GGTCTGAGTGGAGATATGGAATCGCTCATGAGGATATaGAGATGGCTTCTGGTCCAAGAGGCCAGCCAACTC +
Preference number: 3 (lower is better)
Translates to: GLSGDMESLMRI*RWLLVQEASQL
Trigger: GAGTTGGCTGGCCTCTTGGACCAGAAGCCATCTCCATATCCTCATGAGCGATTCCATATCTCCACTCAGACC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 72 bp AGGAAGGGTGAGAAGCCTCTGCTTCCAGTGTCTGCTTaGGAACTGTGGGAGGGTTTGGTTTCCTTGCATAAG +
Preference number: 3 (lower is better)
Translates to: RKGEKPLLPVSA*ELWEGLVSLHK
Trigger: CTTATGCAAGGAAACCAAACCCTCCCACAGTTCCCAAGCAGACACTGGAAGCAGAGGCTTCTCACCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 72 bp ATGCAAGCAGCTCATCAGCCCACCGCAGAATTTTACTaGAACTGTGGAGACTCTAGTCCAAGGGACGAGCTC +
Preference number: 3 (lower is better)
Translates to: MQAAHQPTAEFY*NCGDSSPRDEL
Trigger: GAGCTCGTCCCTTGGACTAGAGTCTCCACAGTTCCAGTAAAATTCTGCGGTGGGCTGATGAGCTGCTTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 72 bp AAGTTAAACTGTCAGGGTGAAGGATACGGAGAGTCTTaGGCGCTTGGCTCCACGGGAAGCAAACACTTTCCC +
Preference number: 3 (lower is better)
Translates to: KLNCQGEGYGES*ALGSTGSKHFP
Trigger: GGGAAAGTGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTCCGTATCCTTCACCCTGACAGTTTAACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 72 bp CGGAGAATCCAGGCTCAGAAGGACACTGGCAACAGCTaGAGGAAAAGCACCTCCTGGGTCCTAAAATCTTTC +
Preference number: 3 (lower is better)
Translates to: RRIQAQKDTGNS*RKSTSWVLKSF
Trigger: GAAAGATTTTAGGACCCAGGAGGTGCTTTTCCTCCAGCTGTTGCCAGTGTCCTTCTGAGCCTGGATTCTCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CAA 90 bp GAAACGACACCCATCTTCAAAAGGCTGATCAAAATCAACCTTCTAGAGAGGGCACTCGCAGCCACAGCTTaGTCTGCACGTGACCTGGCG +
Preference number: 3 (lower is better)
Translates to: ETTPIFKRLIKINLLERALAATA*SARDLA
Trigger: CGCCAGGTCACGTGCAGACAAAGCTGTGGCTGCGAG...TGCCCTCTCTAGAAGGTTGATTTTGATCAGCCTTTTGAAGATGGGTGTCGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CAA 90 bp AAATGCTCCATGAAATTGGCCCTACCTTTAAGACAGACGCTGGTGAGAGGTGAAGAGAGTCTTGGGCGCTaGGCTCCACGGGAAGCAAAC +
Preference number: 3 (lower is better)
Translates to: KCSMKLALPLRQTLVRGEESLGR*APREAN
Trigger: GTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTC...TTCACCTCTCACCAGCGTCTGTCTTAAAGGTAGGGCCAATTTCATGGAGCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CAA 90 bp TCCACCACGACGGAAATCCCCGGAGAATCCAGGCTCAGAAGGACACTGGCAACACCTTGGCGACATTCTTaGTTTTCAAAGAATGCAGTC +
Preference number: 3 (lower is better)
Translates to: STTTEIPGESRLRRTLATPWRHS*FSKNAV
Trigger: GACTGCATTCTTTGAAAACAAAGAATGTCGCCAAGG...TGTTGCCAGTGTCCTTCTGAGCCTGGATTCTCCGGGGATTTCCGTCGTGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR GCA 72 bp ATAAGGATGTCGCTGCCAGCTGCATTGCAAAGGAGTTaGCACCAAGATGAAACCGCAAGTGCCACTCAACCA +
Preference number: 3 (lower is better)
Translates to: IRMSLPAALQRS*HQDETASATQP
Trigger: TGGTTGAGTGGCACTTGCGGTTTCATCTTGGTGGCAACTCCTTTGCAATGCAGCTGGCAGCGACATCCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 72 bp TGCTGTGCTTTGAAAACATGGAAACAGCTCACAGGCTaGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCT +
Preference number: 3 (lower is better)
Translates to: CCALKTWKQLTG*RRQKILGFWFS
Trigger: AGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGAGCTGTTTCCATGTTTTCAAAGCACAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR-3UTR CAA 90 bp CATTGTTGGCCTAGGGGCTATGGTGGCATCGGGGCACGCATGTCAAATCCACTTGAGGGTTTGGTTTCCTaGCATAAGTTTAAGAAGGCA +
Preference number: 3 (lower is better)
Translates to: HCWPRGYGGIGARMSNPLEGLVS*HKFKKA
Trigger: TGCCTTCTTAAACTTATGCAAGGAAACCAAACCCTC...AAGTGGATTTGACATGCGTGCCCCGATGCCACCATAGCCCCTAGGCCAACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CAA 90 bp CACTGCTCTGCGTTGGTTAGGCGACACGACCGTCATACTTACTGGGCCAAATCCAAATGCTCCATGAAATaGGCCCTACCTTTAAGACAG +
Preference number: 3 (lower is better)
Translates to: HCSALVRRHDRHTYWAKSKCSMK*ALPLRQ
Trigger: CTGTCTTAAAGGTAGGGCCAATTTCATGGAGCATTT...GGATTTGGCCCAGTAAGTATGACGGTCGTGTCGCCTAACCAACGCAGAGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR TCA 72 bp TTTGGATGGCAGTGTCTGCAGAAAGCACGCATCTGCTaGAGGATATATGCAAAGGTGCTGTCAGGTCTGAGC +
Preference number: 3 (lower is better)
Translates to: FGWQCLQKARIC*RIYAKVLSGLS
Trigger: GCTCAGACCTGACAGCACCTTTGCATATATCCTTCAGCAGATGCGTGCTTTCTGCAGACACTGCCATCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379713.7
3UTR GCA 72 bp TGTCTGCTTGGGAACTGTGGGAGGGTTTGGTTTCCTTaGATAAGTTTAAGAAGGCATCTTGGCAGCCACCAC +
Preference number: 3 (lower is better)
Translates to: CLLGNCGRVWFP*ISLRRHLGSHH
Trigger: GTGGTGGCTGCCAAGATGCCTTCTTAAACTTATGCAAGGAAACCAAACCCTCCCACAGTTCCCAAGCAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 72 bp GGTTTGGTTTCCTTGCATAAGTTTAAGAAGGCATCTTaGCAGCCACCACAGCGGAACACTGTAGTCCACAGG +
Preference number: 3 (lower is better)
Translates to: GLVSLHKFKKAS*QPPQRNTVVHR
Trigger: CCTGTGGACTACAGTGTTCCGCTGTGGTGGCTGCCAAGATGCCTTCTTAAACTTATGCAAGGAAACCAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 72 bp TGCCCACAGGAAGTAGGCGCACTAAGGAGAGGACTTTaGTCCCAAAGAATCATCAAAGAGAGACGGAGAAGA +
Preference number: 3 (lower is better)
Translates to: CPQEVGALRRGL*SQRIIKERRRR
Trigger: TCTTCTCCGTCTCTCTTTGATGATTCTTTGGGACCAAAGTCCTCTCCTTAGTGCGCCTACTTCCTGTGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CAA 90 bp CACTGCTCTGCGTTGGTTAGGCGACACGACCGTCATACTTACTGGGCCAAATCCGTGTCTGACTCCAACTaGGATCAAATGACTCTAATT +
Preference number: 3 (lower is better)
Translates to: HCSALVRRHDRHTYWAKSVSDSN*DQMTLI
Trigger: AATTAGAGTCATTTGATCCAAGTTGGAGTCAGACAC...GGATTTGGCCCAGTAAGTATGACGGTCGTGTCGCCTAACCAACGCAGAGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR TCA 72 bp ACACATTACAATTCTGTACCAGAACTGCTGCTGATGTaGAGTCCATCCACCACGACGGAAATCCCCGGAGAA +
Preference number: 3 (lower is better)
Translates to: THYNSVPELLLM*SPSTTTEIPGE
Trigger: TTCTCCGGGGATTTCCGTCGTGGTGGATGGACTTCACATCAGCAGCAGTTCTGGTACAGAATTGTAATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 72 bp TGCTTCCAGTGTCTGCTTGGGAACTGTGGGAGGGTTTaGTTTCCTTGCATAAGTTTAAGAAGGCATCTTGGC +
Preference number: 3 (lower is better)
Translates to: CFQCLLGNCGRV*FPCISLRRHLG
Trigger: GCCAAGATGCCTTCTTAAACTTATGCAAGGAAACCAAACCCTCCCACAGTTCCCAAGCAGACACTGGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 72 bp GAAGTGACATTTGTGCTGCAAGTCCCTGTTCTTTTGTaGCCACCACATTCCCTCACCCTCGTCTCAAATACA +
Preference number: 3 (lower is better)
Translates to: EVTFVLQVPVLL*PPHSLTLVSNT
Trigger: TGTATTTGAGACGAGGGTGAGGGAATGTGGTGGCCACAAAAGAACAGGGACTTGCAGCACAAATGTCACTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CAA 90 bp TTGAAAGTGATGGATGAGTTCCCCACGCTGTGCAGCTCCGTGGTGAAGTTCACTAAATGCTCCATGAAATaGGCCCTACCTTTAAGACAG +
Preference number: 3 (lower is better)
Translates to: LKVMDEFPTLCSSVVKFTKCSMK*ALPLRQ
Trigger: CTGTCTTAAAGGTAGGGCCAATTTCATGGAGCATTT...AGTGAACTTCACCACGGAGCTGCACAGCGTGGGGAACTCATCCATCACTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CAA 90 bp AAATGCTCCATGAAATTGGCCCTACCTTTAAGACAGACGCTGGTGAGAGGTGAAGACTGCTGCTGTGCTTaGAAAACATGGAAACAGCTC +
Preference number: 3 (lower is better)
Translates to: KCSMKLALPLRQTLVRGEDCCCA*KTWKQL
Trigger: GAGCTGTTTCCATGTTTTCAAAGCACAGCAGCAGTC...TTCACCTCTCACCAGCGTCTGTCTTAAAGGTAGGGCCAATTTCATGGAGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CAA 90 bp GAAACGACACCCATCTTCAAAAGGCTGATCAAAATCAACCTTCTAGAGAGGGCACCAAGATCTCAGAGTTaGTTCTCAGCGAAACCAGGG +
Preference number: 3 (lower is better)
Translates to: ETTPIFKRLIKINLLERAPRSQS*FSAKPG
Trigger: CCCTGGTTTCGCTGAGAACAAACTCTGAGATCTTGG...TGCCCTCTCTAGAAGGTTGATTTTGATCAGCCTTTTGAAGATGGGTGTCGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CAA 90 bp GAAACGACACCCATCTTCAAAAGGCTGATCAAAATCAACCTTCTAGAGAGGGCAGCCCTTTCCAATCGTTaGACAGAGTTGAACTCCACA +
Preference number: 3 (lower is better)
Translates to: ETTPIFKRLIKINLLERAALSNR*TELNST
Trigger: TGTGGAGTTCAACTCTGTCAAACGATTGGAAAGGGC...TGCCCTCTCTAGAAGGTTGATTTTGATCAGCCTTTTGAAGATGGGTGTCGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR TCA 72 bp GTGAAAGAGCTTTCAACAATCACGACGAGGGATAGTTaGTGCTTCCAGAGATCATGCTGGCTCCTGTTTCAA +
Preference number: 3 (lower is better)
Translates to: VKELSTITTRDS*CFQRSCWLLFQ
Trigger: TTGAAACAGGAGCCAGCATGATCTCTGGAAGCATCAACTATCCCTCGTCGTGATTGTTGAAAGCTCTTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR GCA 72 bp CACTCAACCAGGGTCACACGCCTATCCATGGGAAACTaGATATATAAATGTGCTCGTGTGATTACAGGAAAC +
Preference number: 3 (lower is better)
Translates to: HSTRVTRLSMGN*IYKCARVITGN
Trigger: GTTTCCTGTAATCACACGAGCACATTTATATATGCAGTTTCCCATGGATAGGCGTGTGACCCTGGTTGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 72 bp CAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTaGCGACATTCTTTGTTTTCAAAGAATGCAGTCCTC +
Preference number: 3 (lower is better)
Translates to: QETLQHGVRFLP*RHSLFSKNAVL
Trigger: GAGGACTGCATTCTTTGAAAACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR-3UTR CAA 90 bp GCATTCAATTTACACCATGACGGTTTCCCAGACATTCATCTTACTCTACTGGCCGAGCAAATTTTCCATTaGCTGATTGCATCACAGGGG +
Preference number: 3 (lower is better)
Translates to: AFNLHHDGFPDIHLTLLAEQIFH*LIASQG
Trigger: CCCCTGTGATGCAATCAGCAAATGGAAAATTTGCTC...GGCCAGTAGAGTAAGATGAATGTCTGGGAAACCGTCATGGTGTAAATTGAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379713.7
3UTR TCA 72 bp TGCTCGTGTGATTACAGGAAACACTACAGCATGGCGTaGGGTTTCTTCCTTGGCGACATTCTTTGTTTTCAA +
Preference number: 3 (lower is better)
Translates to: CSCDYRKHYSMA*GFFLGDILCFQ
Trigger: TTGAAAACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCACACGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR CCA 72 bp AAATGTGCTCGTGTGATTACAGGAAACACTACAGCATaGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTT +
Preference number: 3 (lower is better)
Translates to: KCARVITGNTTA*REVSSLATFFV
Trigger: AACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCACACGAGCACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
3UTR TCA 72 bp GAGAACCCAGAAGCCGTGCAGCTCAAATACTGTGTCTaGCTCCAACTTGGATCAAATGACTCTAATTTTGAA +
Preference number: 3 (lower is better)
Translates to: ENPEAVQLKYCV*LQLGSNDSNFE
Trigger: TTCAAAATTAGAGTCATTTGATCCAAGTTGGAGTCAGACACAGTATTTGAGCTGCACGGCTTCTGGGTTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR TCA 72 bp TATCCATGGGAAACTGCATATATAAATGTGCTCGTGTaGTTACAGGAAACACTACAGCATGGCGTGAGGTTT +
Preference number: 3 (lower is better)
Translates to: YPWETAYINVLV*LQETLQHGVRF
Trigger: AAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCACACGAGCACATTTATATATGCAGTTTCCCATGGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CAA 90 bp TGGCATAAGACAGAAGGCAAATCTCAGAACTTGCCAAATACAACACTCAAAATTGCCCTTTCCAATCGTTaGACAGAGTTGAACTCCACA +
Preference number: 3 (lower is better)
Translates to: WHKTEGKSQNLPNTTLKIALSNR*TELNST
Trigger: TGTGGAGTTCAACTCTGTCAAACGATTGGAAAGGGC...AATTTTGAGTGTTGTATTTGGCAAGTTCTGAGATTTGCCTTCTGTCTTATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR-3UTR CAA 90 bp TGGCATAAGACAGAAGGCAAATCTCAGAACTTGCCAAATACAACACTCAAAATTGAACTGTGGGAGGGTTaGGTTTCCTTGCATAAGTTT +
Preference number: 3 (lower is better)
Translates to: WHKTEGKSQNLPNTTLKIELWEG*VSLHKF
Trigger: AAACTTATGCAAGGAAACCAAACCCTCCCACAGTTC...AATTTTGAGTGTTGTATTTGGCAAGTTCTGAGATTTGCCTTCTGTCTTATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR TCA 72 bp TTGGGGTATCTGCAAACCATTCTAGTGATAGAGCTATaGGAACTGGTCAACTTAAGAGTTCAACCATGTGAA +
Preference number: 3 (lower is better)
Translates to: LGYLQTILVIEL*ELVNLRVQPCE
Trigger: TTCACATGGTTGAACTCTTAAGTTGACCAGTTCTCATAGCTCTATCACTAGAATGGTTTGCAGATACCCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR GCA 72 bp AATCAGTATGCTTTTAAGAAGAGTTCTACCCAAATTTaGCTGGACCTAGAAAACGTGGTAGCAAACGGTCTA +
Preference number: 3 (lower is better)
Translates to: NQYAFKKSSTQI*LDLENVVANGL
Trigger: TAGACCGTTTGCTACCACGTTTTCTAGGTCCAGGCAAATTTGGGTAGAACTCTTCTTAAAAGCATACTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379713.7
3UTR TCA 72 bp CAGATAATTCTAATACAGAGCATTCAATTTACACCATaGCGGTTTCCCAGACATTCATCTTACTCTACTGGC +
Preference number: 3 (lower is better)
Translates to: QIILIQSIQFTP*RFPRHSSYSTG
Trigger: GCCAGTAGAGTAAGATGAATGTCTGGGAAACCGTCATGGTGTAAATTGAATGCTCTGTATTAGAATTATCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379713.7
3UTR TCA 72 bp TCTCAGAACTTGCCAAATACAACACTCAAAATTCTGTaGGATAAGTTAGGGAAACGACACCCATCTTCAAAA +
Preference number: 3 (lower is better)
Translates to: SQNLPNTTLKIL*DKLGKRHPSSK
Trigger: TTTTGAAGATGGGTGTCGTTTCCCTAACTTATCTCACAGAATTTTGAGTGTTGTATTTGGCAAGTTCTGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 72 bp TTTCCTTTGCTATTTAATTATTGCACCAACGAGATATaGGCAGTATGGATATCTTGCCAACAATTTCTTCCT +
Preference number: 3 (lower is better)
Translates to: FPLLFNYCTNEI*AVWISCQQFLP
Trigger: AGGAAGAAATTGTTGGCAAGATATCCATACTGCCCATATCTCGTTGGTGCAATAATTAAATAGCAAAGGAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CCA 72 bp ATCCCATTACTTAGTGCCAACAATTCAGAAGGATTATaGCCTCTTCCTCAAACAATATGGAATTATTTGAGT +
Preference number: 3 (lower is better)
Translates to: IPLLSANNSEGL*PLPQTIWNYLS
Trigger: ACTCAAATAATTCCATATTGTTTGAGGAAGAGGCCATAATCCTTCTGAATTGTTGGCACTAAGTAATGGGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
CDS-3UTR GCA 90 bp CGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCACGTGCACAGACAGGGCTGCGCCCTCCTGTaGAGTGGTCCCAGCCATCTC +
Preference number: 4 (lower is better)
Translates to: RPPVQWSQPSPPWHVHRQGCALL*SGPSHL
Trigger: GAGATGGCTGGGACCACTGCACAGGAGGGCGCAGCC...CTGTCTGTGCACGTGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp CGACGCCAGGCTGCGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCATCAAACGGCGCAGACTaGAGAGTCTCCCGGGCCAGT +
Preference number: 4 (lower is better)
Translates to: RRQAAPSCAVVPAISSLASNGAD*RVSRAS
Trigger: ACTGGCCCGGGAGACTCTGCAGTCTGCGCCGTTTGA...TGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCGCAGCCTGGCGTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp GCTGATGTGAAGTCCATCCACCACGACGGAAATCCCCGGAGAATCCAGGCTCAGCCGGCGCACGGGCTCTaGGCCGCTCCGCAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: ADVKSIHHDGNPRRIQAQPAHGL*AAPQGD
Trigger: GTCACCCTGCGGAGCGGCTCAGAGCCCGTGCGCCGG...CTGAGCCTGGATTCTCCGGGGATTTCCGTCGTGGTGGATGGACTTCACATCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp CTCACAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTCCGGCGCACGGGCTCTaGGCCGCTCCGCAGGGTGAC +
Preference number: 4 (lower is better)
Translates to: LTGWRRQKILGFWFSGDTPAHGL*AAPQGD
Trigger: GTCACCCTGCGGAGCGGCTCAGAGCCCGTGCGCCGG...AGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp TTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCACGTCTGCCTTCGTGTCCTCTCTaGGGGTGGCCGGCGCACGGG +
Preference number: 4 (lower is better)
Translates to: LGQEKGKTWVSQEAGPRLPSCPL*GWPAHG
Trigger: CCCGTGCGCCGGCCACCCCCAGAGAGGACACGAAGG...CAGACGTGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp TCCACCACGACGGAAATCCCCGGAGAATCCAGGCTCAGAAGGACACTGGCAACACCCCCGAGCCCGCGGTaGAGTCCACGGCAGAAGACC +
Preference number: 4 (lower is better)
Translates to: STTTEIPGESRLRRTLATPPSPR*SPRQKT
Trigger: GGTCTTCTGCCGTGGACTTCACCGCGGGCTCGGGGG...TGTTGCCAGTGTCCTTCTGAGCCTGGATTCTCCGGGGATTTCCGTCGTGGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp CTCACAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTCTCCCCTTCCTCTGCTaGGGAGGCAGCCGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: LTGWRRQKILGFWFSGDTLPFLC*GGSRRP
Trigger: GGGGCGCCGGCTGCCTCCTCAGCAGAGGAAGGGGAG...AGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp CGACGCCAGGCTGCGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCAAAGTTCCAAGTGGCATaGTGCCCACAGGAAGTAGGC +
Preference number: 4 (lower is better)
Translates to: RRQAAPSCAVVPAISSLAKFQVA*CPQEVG
Trigger: GCCTACTTCCTGTGGGCATCATGCCACTTGGAACTT...TGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCGCAGCCTGGCGTCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp CGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCACGTGCACAGACAGAGTGCTCACCCATGGTaGCCGCAACTGCACAGAGAA +
Preference number: 4 (lower is better)
Translates to: RPPVQWSQPSPPWHVHRQSAHPW*PQLHRE
Trigger: TTCTCTGTGCAGTTGCGGTCACCATGGGTGAGCACT...CTGTCTGTGCACGTGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp CGACGCCAGGCTGCGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCAACGACGAGGGATAGTTaGTGCTTCCAGAGATCATGC +
Preference number: 4 (lower is better)
Translates to: RRQAAPSCAVVPAISSLATTRDS*CFQRSC
Trigger: GCATGATCTCTGGAAGCATCAACTATCCCTCGTCGT...TGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCGCAGCCTGGCGTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp CACGTGCACAGACAGTGCTCACCCATGGTGACCGCAACTGCACAGAGAAACGCTGTCGCTTCCTCCGCCTaGCGGGTTTGGGGTGTCCGC +
Preference number: 4 (lower is better)
Translates to: HVHRQCSPMVTATAQRNAVASSA*RVWGVR
Trigger: GCGGACACCCCAAACCCGCCAGGCGGAGGAAGCGAC...AGCGTTTCTCTGTGCAGTTGCGGTCACCATGGGTGAGCACTGTCTGTGCACGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp GCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTGGCCCTTCGTGTCCTCTCTaGGGGTGGCCGGCGCACGGG +
Preference number: 4 (lower is better)
Translates to: AGGGRRSWASGFLVILSGPSCPL*GWPAHG
Trigger: CCCGTGCGCCGGCCACCCCCAGAGAGGACACGAAGG...GCCACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp CCTGATTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCACTGTCCCCTCGGGCTTaGTCGGCGGGCACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PDLGQEKGKTWVSQEAGPLSPRA*SAGTSP
Trigger: GGGAGAAGTGCCCGCCGACCAAGCCCGAGGGGACAG...TGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAATCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp TTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCACGTCTACCAGAAGTCGGCCCTaGGGTCCTCCCCGTAACCGC +
Preference number: 4 (lower is better)
Translates to: FGAGERQNVGEPRSRPTSTRSRP*GPPRNR
Trigger: GCGGTTACGGGGAGGACCGCAGGGCCGACTTCTGGT...AGACGTGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp AAGAAGCAGGCCCACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCTCCGCCTGGCGGGTTTaGGGTGTCCGCTGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: KKQAHVWQGLMHDFNWHSSAWRV*GVRCRG
Trigger: ACCCCGACAGCGGACACCCCAAACCCGCCAGGCGGA...GGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTGGGCCTGCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp CTCACAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTGTCGCTTCCTCCGCCTaGCGGGTTTGGGGTGTCCGC +
Preference number: 4 (lower is better)
Translates to: LTGWRRQKILGFWFSGDTVASSA*RVWGVR
Trigger: GCGGACACCCCAAACCCGCCAGGCGGAGGAAGCGAC...AGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp GGAGAGTCTTGGGCGCTTGGCTCCACGGGAAGCAAACACTTTCCCCTGCGACAGGGATACGGAGAGTCTTaGGCGCTTGGCTCCACGGGA +
Preference number: 4 (lower is better)
Translates to: GESWALGSTGSKHFPLRQGYGES*ALGSTG
Trigger: TCCCGTGGAGCCAAGCGCCCAAGACTCTCCGTATCC...CTGTCGCAGGGGAAAGTGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp CCTGATTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCATGCAGCCCTTCCAGGTaGAGCCACATTAGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: PDLGQEKGKTWVSQEAGPCSPSR*SHISRP
Trigger: GGGGCGGCTAATGTGGCTTCACCTGGAAGGGCTGCA...TGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAATCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp GCTGATGTGAAGTCCATCCACCACGACGGAAATCCCCGGAGAATCCAGGCTCAGACCTCACCACGTCGGTaGCCGTCCACTCCAACGGGT +
Preference number: 4 (lower is better)
Translates to: ADVKSIHHDGNPRRIQAQTSPRR*PSTPTG
Trigger: ACCCGTTGGAGTGGACGGTCACCGACGTGGTGAGGT...CTGAGCCTGGATTCTCCGGGGATTTCCGTCGTGGTGGATGGACTTCACATCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp GGAGAGTCTTGGGCGCTTGGCTCCACGGGAAGCAAACACTTTCCCCTGCGACAGAGGGTGCCAAGTGGCTaGCTCCAGATTCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: GESWALGSTGSKHFPLRQRVPSG*LQIHCS
Trigger: GGAGCAGTGAATCTGGAGTCAGCCACTTGGCACCCT...CTGTCGCAGGGGAAAGTGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp TTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCACGTCTTGGCTGTATCCTTCCTaGGCTCCTGGCGGGCCACAC +
Preference number: 4 (lower is better)
Translates to: FGAGERQNVGEPRSRPTSWLYPS*APGGPH
Trigger: GTGTGGCCCGCCAGGAGCTCAGGAAGGATACAGCCA...AGACGTGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp CACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCCCAGAAGCGACTACCAGAAGTCGGCCCTaGGGTCCTCCCCGTAACCGC +
Preference number: 4 (lower is better)
Translates to: HVWQGLMHDFNWHSPEATTRSRP*GPPRNR
Trigger: GCGGTTACGGGGAGGACCGCAGGGCCGACTTCTGGT...AGTCGCTTCTGGGGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp TCACAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTTCCGCCTGGCGGGTTTaGGGTGTCCGCTGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: SQAGGGRRSWASGFLVILSAWRV*GVRCRG
Trigger: ACCCCGACAGCGGACACCCCAAACCCGCCAGGCGGA...AAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp CCTGATTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCAGACGAGGTGTCCGTCTaGTCATCCCGGAGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: PDLGQEKGKTWVSQEAGPDEVSV*SSRSSE
Trigger: CTCCGAGCTCCGGGATGACCAGACGGACACCTCGTC...TGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAATCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp AAACCTTTACCAACACCGCATCCCAGCAATAATGGGCCACCTCCCGAGGGCAGATGCAGCCCTTCCAGGTaGAGCCACATTAGCCGCCCC +
Preference number: 4 (lower is better)
Translates to: KPLPTPHPSNNGPPPEGRCSPSR*SHISRP
Trigger: GGGGCGGCTAATGTGGCTTCACCTGGAAGGGCTGCA...TCTGCCCTCGGGAGGTGGCCCATTATTGCTGGGATGCGGTGTTGGTAAAGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp CACGTGCACAGACAGTGCTCACCCATGGTGACCGCAACTGCACAGAGAAACGCTCACACTCCTCCCATCTaGGGTCCCCAGGCAGATGCA +
Preference number: 4 (lower is better)
Translates to: HVHRQCSPMVTATAQRNAHTPPI*GPQADA
Trigger: TGCATCTGCCTGGGGACCTCAGATGGGAGGAGTGTG...AGCGTTTCTCTGTGCAGTTGCGGTCACCATGGGTGAGCACTGTCTGTGCACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp GGTGGGAGAGGTTCGTGTGGGATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGCACCACCCCACGGGGTaGAAATCCGCGATGACTACG +
Preference number: 4 (lower is better)
Translates to: GGRGSCGIGELFHFVTVSHHPTG*KSAMTT
Trigger: CGTAGTCATCGCGGATTTGCACCCCGTGGGGTGGTG...CGAGACCGTCACGAAATGAAACAACTCCCCGATCCCACACGAACCTCTCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR GCA 90 bp GGAGAGTCTTGGGCGCTTGGCTCCACGGGAAGCAAACACTTTCCCCTGCGACAGCGCTGCCAGCTGCATTaGAAAGGAGTTGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: GESWALGSTGSKHFPLRQRCQLH*KGVATK
Trigger: CTTGGTGGCAACTCCTTTGCAATGCAGCTGGCAGCG...CTGTCGCAGGGGAAAGTGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp AAGCACCTCCTGGGTCCTAAAATCTTTCTGGGCTCTCCTCAAGGACCGGAGAGAATGGCGACGCCAGGCTaGGCCCTCCTGTGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: KHLLGPKIFLGSPQGPERMATPG*ALLCSG
Trigger: ACCACTGCACAGGAGGGCGCAGCCTGGCGTCGCCAT...TCTCTCCGGTCCTTGAGGAGAGCCCAGAAAGATTTTAGGACCCAGGAGGTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp CGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCACGTGCACAGACAGTGCTTCCAGAGATCATaGTGGCTCCTGTTTCAAGCA +
Preference number: 4 (lower is better)
Translates to: RPPVQWSQPSPPWHVHRQCFQRS*WLLFQA
Trigger: TGCTTGAAACAGGAGCCAGCATGATCTCTGGAAGCA...CTGTCTGTGCACGTGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp CGACGCCAGGCTGCGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCAGGGTCTAGAAAAGACTaGGTAGAGTTTGTCTCTACA +
Preference number: 4 (lower is better)
Translates to: RRQAAPSCAVVPAISSLAGSRKD*VEFVST
Trigger: TGTAGAGACAAACTCTACCCAGTCTTTTCTAGACCC...TGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCGCAGCCTGGCGTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp TTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCACGTCTCAGAGACAACTTTCATaGCGACGCCAGGCTGCGCCC +
Preference number: 4 (lower is better)
Translates to: FGAGERQNVGEPRSRPTSQRQLS*RRQAAP
Trigger: GGGCGCAGCCTGGCGTCGCCATGAAAGTTGTCTCTG...AGACGTGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp GGAGAGTCTTGGGCGCTTGGCTCCACGGGAAGCAAACACTTTCCCCTGCGACAGCGTAGAAAGCCACTTTaGCTCTCTCGATCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: GESWALGSTGSKHFPLRQRRKPL*LSRSGG
Trigger: GCCACCAGATCGAGAGAGTCAAAGTGGCTTTCTACG...CTGTCGCAGGGGAAAGTGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp GCTGATGTGAAGTCCATCCACCACGACGGAAATCCCCGGAGAATCCAGGCTCAGAAGGCAAAACGTGGGTaGGCCAAGAAGCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: ADVKSIHHDGNPRRIQAQKAKRG*AKKQAH
Trigger: GTGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTT...CTGAGCCTGGATTCTCCGGGGATTTCCGTCGTGGTGGATGGACTTCACATCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp GCTGATGTGAAGTCCATCCACCACGACGGAAATCCCCGGAGAATCCAGGCTCAGTCCAAGGGAGCTGCCTaGTTTGGGGCAGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: ADVKSIHHDGNPRRIQAQSKGAA*FGAGER
Trigger: CCTTTCTCCTGCCCCAAATCAGGCAGCTCCCTTGGA...CTGAGCCTGGATTCTCCGGGGATTTCCGTCGTGGTGGATGGACTTCACATCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp AAACCTTTACCAACACCGCATCCCAGCAATAATGGGCCACCTCCCGAGGGCAGAGGGACTCCTGCTCGGTaGCCTGCTGCAGTGATCCTT +
Preference number: 4 (lower is better)
Translates to: KPLPTPHPSNNGPPPEGRGTPAR*PAAVIL
Trigger: AAGGATCACTGCAGCAGGTCACCGAGCAGGAGTCCC...TCTGCCCTCGGGAGGTGGCCCATTATTGCTGGGATGCGGTGTTGGTAAAGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp CATTGTTGGCCTAGGGGCTATGGTGGCATCGGGGCACGCATGTCAAATCCACTTCACCACCCCACGGGGTaGAAATCCGCGATGACTACG +
Preference number: 4 (lower is better)
Translates to: HCWPRGYGGIGARMSNPLHHPTG*KSAMTT
Trigger: CGTAGTCATCGCGGATTTGCACCCCGTGGGGTGGTG...AAGTGGATTTGACATGCGTGCCCCGATGCCACCATAGCCCCTAGGCCAACAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp GCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTGGCGAACCAGCACGCATTTaGCCGGTCCCACCGACTGAG +
Preference number: 4 (lower is better)
Translates to: AGGGRRSWASGFLVILSGEPARI*PVPPTE
Trigger: CTCAGTCGGTGGGACCGGGCAAATGCGTGCTGGTTC...GCCACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp CTCACAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTGAACCAGCACGCATTTaGCCGGTCCCACCGACTGAG +
Preference number: 4 (lower is better)
Translates to: LTGWRRQKILGFWFSGDTEPARI*PVPPTE
Trigger: CTCAGTCGGTGGGACCGGGCAAATGCGTGCTGGTTC...AGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp GGAGAGTCTTGGGCGCTTGGCTCCACGGGAAGCAAACACTTTCCCCTGCGACAGGATGTCGCTGCCAGCTaGATTGCAAAGGAGTTGCCA +
Preference number: 4 (lower is better)
Translates to: GESWALGSTGSKHFPLRQDVAAS*IAKELP
Trigger: TGGCAACTCCTTTGCAATGCAGCTGGCAGCGACATC...CTGTCGCAGGGGAAAGTGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp TCCACCACGACGGAAATCCCCGGAGAATCCAGGCTCAGAAGGACACTGGCAACACACGTGCACAGACAGTaGTCACCCATGGTGACCGCA +
Preference number: 4 (lower is better)
Translates to: STTTEIPGESRLRRTLATHVHRQ*SPMVTA
Trigger: TGCGGTCACCATGGGTGAGCACTGTCTGTGCACGTG...TGTTGCCAGTGTCCTTCTGAGCCTGGATTCTCCGGGGATTTCCGTCGTGGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp TTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCACGTCTGACAGCACTCTAGCTTaGCACAGACTCGGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: FGAGERQNVGEPRSRPTSDSTLA*HRLGGR
Trigger: TCTGCCGCCGAGTCTGTGCCAAGCTAGAGTGCTGTC...AGACGTGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp AAACCTTTACCAACACCGCATCCCAGCAATAATGGGCCACCTCCCGAGGGCAGAAGCCGGTCTCCTCACTaGCGGTGTCATCGTCCATGG +
Preference number: 4 (lower is better)
Translates to: KPLPTPHPSNNGPPPEGRSRSPH*RCHRPW
Trigger: CCATGGACGATGACACCGCCAGTGAGGAGACCGGCT...TCTGCCCTCGGGAGGTGGCCCATTATTGCTGGGATGCGGTGTTGGTAAAGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp CATCAAAGAGAGACGGAGAAGAAACGGTACCATCCAGGGAAGGAATGCGGGGCAGACGAGGTGTCCGTCTaGTCATCCCGGAGCTCGGAG +
Preference number: 4 (lower is better)
Translates to: HQRETEKKRYHPGKECGADEVSV*SSRSSE
Trigger: CTCCGAGCTCCGGGATGACCAGACGGACACCTCGTC...TGCCCCGCATTCCTTCCCTGGATGGTACCGTTTCTTCTCCGTCTCTCTTTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
3UTR CAA 72 bp ACTGTCAGGGTGAAGGATACGGAGAGTCTTGGGCGCTaGGCTCCACGGGAAGCAAACACTTTCCCCTGCGAC +
Preference number: 4 (lower is better)
Translates to: TVRVKDTESLGR*APREANTFPCD
Trigger: GTCGCAGGGGAAAGTGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTCCGTATCCTTCACCCTGACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
CDS-3UTR TCA 90 bp CATCAAAGAGAGACGGAGAAGAAACGGTACCATCCAGGGAAGGAATGCGGGGCACCCGGTCCCACCGACTaGGGTAGCTCTGCAATCCTT +
Preference number: 4 (lower is better)
Translates to: HQRETEKKRYHPGKECGAPGPTD*GSSAIL
Trigger: AAGGATTGCAGAGCTACCTCAGTCGGTGGGACCGGG...TGCCCCGCATTCCTTCCCTGGATGGTACCGTTTCTTCTCCGTCTCTCTTTGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp CCTGATTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCATCTGGTGGCATAACTTaGTGGCAGGCCCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: PDLGQEKGKTWVSQEAGPSGGIT*WQAPAS
Trigger: TGAAGCTGGGGCCTGCCATCAAGTTATGCCACCAGA...TGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAATCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp GCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTGGCTCCAAGGGAGCTGCCTaGTTTGGGGCAGGAGAAAGG +
Preference number: 4 (lower is better)
Translates to: AGGGRRSWASGFLVILSGSKGAA*FGAGER
Trigger: CCTTTCTCCTGCCCCAAATCAGGCAGCTCCCTTGGA...GCCACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp TCCACCACGACGGAAATCCCCGGAGAATCCAGGCTCAGAAGGACACTGGCAACACACTACAGCATGGCGTaGGGTTTCTTCCTTGGCGAC +
Preference number: 4 (lower is better)
Translates to: STTTEIPGESRLRRTLATHYSMA*GFFLGD
Trigger: GTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTG...TGTTGCCAGTGTCCTTCTGAGCCTGGATTCTCCGGGGATTTCCGTCGTGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp CACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCCCAGAAGCGACTCGCAGAAGCAGCAGCTaGCCGCACGTGGTAATGATC +
Preference number: 4 (lower is better)
Translates to: HVWQGLMHDFNWHSPEATRRSSS*PHVVMI
Trigger: GATCATTACCACGTGCGGGCAGCTGCTGCTTCTGCG...AGTCGCTTCTGGGGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp GGTTCGTGTGGGATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGAAGAAGTTTACCAGAAGTCGGCCCTaGGGTCCTCCCCGTAACCGC +
Preference number: 4 (lower is better)
Translates to: GSCGIGELFHFVTVSKKFTRSRP*GPPRNR
Trigger: GCGGTTACGGGGAGGACCGCAGGGCCGACTTCTGGT...AAACTTCTTCGAGACCGTCACGAAATGAAACAACTCCCCGATCCCACACGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR GCA 90 bp GCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTGGCCCTTGTTGTTCTGTGTaGACCACCCCACGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: AGGGRRSWASGFLVILSGPCCSV*TTPRGA
Trigger: TGCACCCCGTGGGGTGGTGCACACAGAACAACAAGG...GCCACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp TTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCACGTCTGGGTCAGAAGCAGGAGTaGTTGGCCGTCAATATCCTG +
Preference number: 4 (lower is better)
Translates to: LGQEKGKTWVSQEAGPRLGQKQE*LAVNIL
Trigger: CAGGATATTGACGGCCAAGCACTCCTGCTTCTGACC...CAGACGTGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp AAGAAGCAGGCCCACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCAGCTCCATGCACTCCTaGACCGTCGGAAGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: KKQAHVWQGLMHDFNWHSSSMHS*TVGRVR
Trigger: TCTGACCCTTCCGACGGTGCAGGAGTGCATGGAGCT...GGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTGGGCCTGCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp CACTGCTCTGCGTTGGTTAGGCGACACGACCGTCATACTTACTGGGCCAAATCCTTGCATGGAGATGCCTaGCGGCCTTCCTTCACTCCC +
Preference number: 4 (lower is better)
Translates to: HCSALVRRHDRHTYWAKSLHGDA*RPSFTP
Trigger: GGGAGTGAAGGAAGGCCGGCAGGCATCTCCATGCAA...GGATTTGGCCCAGTAAGTATGACGGTCGTGTCGCCTAACCAACGCAGAGCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp TCCACCACGACGGAAATCCCCGGAGAATCCAGGCTCAGAAGGACACTGGCAACAAGGGTGAGAAGCCTCTaGTTCCAGTGTCTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: STTTEIPGESRLRRTLATRVRSL*FQCLLG
Trigger: CCCAAGCAGACACTGGAAGCAGAGGCTTCTCACCCT...TGTTGCCAGTGTCCTTCTGAGCCTGGATTCTCCGGGGATTTCCGTCGTGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp CATTGTTGGCCTAGGGGCTATGGTGGCATCGGGGCACGCATGTCAAATCCACTTGAGTTCCCCACGCTGTaGAGCTCCGTGGTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: HCWPRGYGGIGARMSNPLEFPTL*SSVVKF
Trigger: GAACTTCACCACGGAGCTGCACAGCGTGGGGAACTC...AAGTGGATTTGACATGCGTGCCCCGATGCCACCATAGCCCCTAGGCCAACAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp CACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCCCAGAAGCGACTCGGTGTCATCGTCCATaGCGTCAGCGTCCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: HVWQGLMHDFNWHSPEATRCHRP*RQRPPL
Trigger: AAGAGGAGGACGCTGACGCCATGGACGATGACACCG...AGTCGCTTCTGGGGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp GGAGAGTCTTGGGCGCTTGGCTCCACGGGAAGCAAACACTTTCCCCTGCGACAGATGAGGATATGGAGATaGCTTCTGGTCCAAGAGGCC +
Preference number: 4 (lower is better)
Translates to: GESWALGSTGSKHFPLRQMRIWR*LLVQEA
Trigger: GGCCTCTTGGACCAGAAGCCATCTCCATATCCTCAT...CTGTCGCAGGGGAAAGTGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp GAGAGTCTTGGGCGCTTGGCTCCACGGGAAGCAAACACTTTCCCCTGCGACAGTCTTCCAGTGTCTGCTTaGGAACTGTGGGAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: ESLGRLAPREANTFPCDSLPVSA*ELWEGL
Trigger: CAAACCCTCCCACAGTTCCCAAGCAGACACTGGAAG...ACTGTCGCAGGGGAAAGTGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp AAGAAGCAGGCCCACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCAGCACTGCTCTGCGTTaGTTAGGCGACACGACCGTC +
Preference number: 4 (lower is better)
Translates to: KKQAHVWQGLMHDFNWHSSTALR*LGDTTV
Trigger: GACGGTCGTGTCGCCTAACCAACGCAGAGCAGTGCT...GGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTGGGCCTGCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
3UTR CAA 72 bp GGTCCAAGAGGCCAGCCAACTCTCGCAGCCACAGCTTaGTCTGCACGTGACCTGGCGGATTTAACACAACTG +
Preference number: 4 (lower is better)
Translates to: GPRGQPTLAATA*SARDLADLTQL
Trigger: CAGTTGTGTTAAATCCGCCAGGTCACGTGCAGACAAAGCTGTGGCTGCGAGAGTTGGCTGGCCTCTTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
CDS-3UTR TCA 90 bp GAGAGTCTTGGGCGCTTGGCTCCACGGGAAGCAAACACTTTCCCCTGCGACAGTCCTGTGGTGTCCAGGTaGGGGAATAAACAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: ESLGRLAPREANTFPCDSPVVSR*GNKQRS
Trigger: TGACCTTTGTTTATTCCCTCACCTGGACACCACAGG...ACTGTCGCAGGGGAAAGTGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp AATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATCCCAGCAATAATGCTCCCCTTCCTCTGCTaGGGAGGCAGCCGGCGCCCC +
Preference number: 4 (lower is better)
Translates to: NQSFSPGNLYQHRIPAIMLPFLC*GGSRRP
Trigger: GGGGCGCCGGCTGCCTCCTCAGCAGAGGAAGGGGAG...CATTATTGCTGGGATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp CATTGTTGGCCTAGGGGCTATGGTGGCATCGGGGCACGCATGTCAAATCCACTTGAACTGCTGCTGATGTaGAGTCCATCCACCACGACG +
Preference number: 4 (lower is better)
Translates to: HCWPRGYGGIGARMSNPLELLLM*SPSTTT
Trigger: CGTCGTGGTGGATGGACTTCACATCAGCAGCAGTTC...AAGTGGATTTGACATGCGTGCCCCGATGCCACCATAGCCCCTAGGCCAACAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp TCACAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTCCTTGTTGTTCTGTGTaGACCACCCCACGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: SQAGGGRRSWASGFLVILPCCSV*TTPRGA
Trigger: TGCACCCCGTGGGGTGGTGCACACAGAACAACAAGG...AAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp TCCACCACGACGGAAATCCCCGGAGAATCCAGGCTCAGAAGGACACTGGCAACATCCACTCCAACGGGTTaGTCTCCAGAACCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: STTTEIPGESRLRRTLATSTPTG*SPEPVS
Trigger: AGAGACTGGTTCTGGAGAGCAACCCGTTGGAGTGGA...TGTTGCCAGTGTCCTTCTGAGCCTGGATTCTCCGGGGATTTCCGTCGTGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp CTCCCCAGAAGCGACTGCTGCTGTGCTTTGAAAACATGGAAACAGCTCACAGGCAGCTCCATGCACTCCTaGACCGTCGGAAGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LPRSDCCCALKTWKQLTGSSMHS*TVGRVR
Trigger: TCTGACCCTTCCGACGGTGCAGGAGTGCATGGAGCT...GCCTGTGAGCTGTTTCCATGTTTTCAAAGCACAGCAGCAGTCGCTTCTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp CACTGCTCTGCGTTGGTTAGGCGACACGACCGTCATACTTACTGGGCCAAATCCCTAGTTGCATGGAGATaGCTGCCGGCCTTCCTTCAC +
Preference number: 4 (lower is better)
Translates to: HCSALVRRHDRHTYWAKSLVAWR*LPAFLH
Trigger: GTGAAGGAAGGCCGGCAGGCATCTCCATGCAACTAG...GGATTTGGCCCAGTAAGTATGACGGTCGTGTCGCCTAACCAACGCAGAGCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp CACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCCCAGAAGCGACTTGCTCGGTGACCTGCTaGAGTGATCCTTCTAAGGGG +
Preference number: 4 (lower is better)
Translates to: HVWQGLMHDFNWHSPEATCSVTC*SDPSKG
Trigger: CCCCTTAGAAGGATCACTGCAGCAGGTCACCGAGCA...AGTCGCTTCTGGGGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp CTCACAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTGCCTGGTTCATATGCTaGCAGCTAGGGCAGAACGAG +
Preference number: 4 (lower is better)
Translates to: LTGWRRQKILGFWFSGDTAWFIC*QLGQNE
Trigger: CTCGTTCTGCCCTAGCTGGCAGCATATGAACCAGGC...AGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp GCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTGGCTCAGCGAAACCAGGGTaGCAAGTGGCTGACTCCAGA +
Preference number: 4 (lower is better)
Translates to: AGGGRRSWASGFLVILSGSAKPG*QVADSR
Trigger: TCTGGAGTCAGCCACTTGGCACCCTGGTTTCGCTGA...GCCACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp CATTGTTGGCCTAGGGGCTATGGTGGCATCGGGGCACGCATGTCAAATCCACTTCATGAGTGGGGTGAATaGCAGCAGGAGACAGTGTGC +
Preference number: 4 (lower is better)
Translates to: HCWPRGYGGIGARMSNPLHEWGE*QQETVC
Trigger: GCACACTGTCTCCTGCTGGCATTCACCCCACTCATG...AAGTGGATTTGACATGCGTGCCCCGATGCCACCATAGCCCCTAGGCCAACAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp GGAGAGTCTTGGGCGCTTGGCTCCACGGGAAGCAAACACTTTCCCCTGCGACAGTTCAGCGTCTCTTCCTaGAAATTCCAGTGGGGATCT +
Preference number: 4 (lower is better)
Translates to: GESWALGSTGSKHFPLRQFSVSS*KFQWGS
Trigger: AGATCCCCACTGGAATTTCCAGGAAGAGACGCTGAA...CTGTCGCAGGGGAAAGTGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp CATTGTTGGCCTAGGGGCTATGGTGGCATCGGGGCACGCATGTCAAATCCACTTGGTTGCTTTCCCCGATaGGGGGCTTGGAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: HCWPRGYGGIGARMSNPLGCFPR*GAWRSS
Trigger: AGAAGATCTCCAAGCCCCCCATCGGGGAAAGCAACC...AAGTGGATTTGACATGCGTGCCCCGATGCCACCATAGCCCCTAGGCCAACAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp ACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTCTGTCCCCTCGGGCTTaGTCGGCGGGCACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: TGNTTAWREVSSLATFFVLSPRA*SAGTSP
Trigger: GGGAGAAGTGCCCGCCGACCAAGCCCGAGGGGACAG...AACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp CACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCCCAGAAGCGACTGAGGGCAGACTCAGTTaGCGTACTGGGCGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: HVWQGLMHDFNWHSPEATEGRLS*RTGRRK
Trigger: CTTTCTACGCCCAGTACGCCAACTGAGTCTGCCCTC...AGTCGCTTCTGGGGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp CCTGATTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCAGAGAAAGGCAAAACGTaGGTGAGCCAAGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: PDLGQEKGKTWVSQEAGPEKGKT*VSQEAG
Trigger: GCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTC...TGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAATCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp TTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCACGTCTGGGAGCTGCCTGATTTaGGGCAGGAGAAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: FGAGERQNVGEPRSRPTSGSCLI*GRRKAK
Trigger: TTTTGCCTTTCTCCTGCCCCAAATCAGGCAGCTCCC...AGACGTGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp CTCACAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTCCTTTCCAGCATGAGTaGGGTGAATGCCAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LTGWRRQKILGFWFSGDTPFQHE*GECQQE
Trigger: CTCCTGCTGGCATTCACCCCACTCATGCTGGAAAGG...AGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp CACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCCCAGAAGCGACTGACACTGGCAACAGCTaGAGGAAAAGCACCTCCTGG +
Preference number: 4 (lower is better)
Translates to: HVWQGLMHDFNWHSPEATDTGNS*RKSTSW
Trigger: CCAGGAGGTGCTTTTCCTCCAGCTGTTGCCAGTGTC...AGTCGCTTCTGGGGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp CGACGCCAGGCTGCGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCAAATTCAGAAGGATTATaGCCTCTTCCTCAAACAATA +
Preference number: 4 (lower is better)
Translates to: RRQAAPSCAVVPAISSLANSEGL*PLPQTI
Trigger: TATTGTTTGAGGAAGAGGCCATAATCCTTCTGAATT...TGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCGCAGCCTGGCGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp GAGAGTCTTGGGCGCTTGGCTCCACGGGAAGCAAACACTTTCCCCTGCGACAGTTTCAACGTGTTTGAATaGTGTGTGGGGAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: ESLGRLAPREANTFPCDSFNVFE*CVGSST
Trigger: AGTGCTGCTCCCCACACATCATTCAAACACGTTGAA...ACTGTCGCAGGGGAAAGTGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp CACTGCTCTGCGTTGGTTAGGCGACACGACCGTCATACTTACTGGGCCAAATCCAGCAGTATTTCCCGTTaGCGGTTCCTGTGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: HCSALVRRHDRHTYWAKSSSISR*RFLWCP
Trigger: TGGACACCACAGGAACCGTCAACGGGAAATACTGCT...GGATTTGGCCCAGTAAGTATGACGGTCGTGTCGCCTAACCAACGCAGAGCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp AATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATCCCAGCAATAATGCCCCCGAGCCCGCGGTaGAGTCCACGGCAGAAGACC +
Preference number: 4 (lower is better)
Translates to: NQSFSPGNLYQHRIPAIMPPSPR*SPRQKT
Trigger: GGTCTTCTGCCGTGGACTTCACCGCGGGCTCGGGGG...CATTATTGCTGGGATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp TGTGCTCGTGTGATTACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGACCTCACCACGTCGGTaGCCGTCCACTCCAACGGGT +
Preference number: 4 (lower is better)
Translates to: CARVITGNTTAWREVSSLTSPRR*PSTPTG
Trigger: ACCCGTTGGAGTGGACGGTCACCGACGTGGTGAGGT...CAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCACACGAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp AAGAAGCAGGCCCACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCACGTCTGGCAGGGTCTaGTGCATGACTTTAACTGGC +
Preference number: 4 (lower is better)
Translates to: KKQAHVWQGLMHDFNWHSTSGRV*CMTLTG
Trigger: GCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGT...GGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTGGGCCTGCTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp CACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCCCAGAAGCGACTGTAGTCCACAGGGTCTaGGTGGAGATATGGAATCGC +
Preference number: 4 (lower is better)
Translates to: HVWQGLMHDFNWHSPEATVVHRV*VEIWNR
Trigger: GCGATTCCATATCTCCACTCAGACCCTGTGGACTAC...AGTCGCTTCTGGGGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp CACGTGCACAGACAGTGCTCACCCATGGTGACCGCAACTGCACAGAGAAACGCTTACCAGAACTGCTGCTaGTGTGAAGTCCATCCACCA +
Preference number: 4 (lower is better)
Translates to: HVHRQCSPMVTATAQRNAYQNCC*CEVHPP
Trigger: TGGTGGATGGACTTCACATCAGCAGCAGTTCTGGTA...AGCGTTTCTCTGTGCAGTTGCGGTCACCATGGGTGAGCACTGTCTGTGCACGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp TTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCACGTCTTTGGTGTTTAGACCATaGCATTGTTGGCCTAGGGGC +
Preference number: 4 (lower is better)
Translates to: FGAGERQNVGEPRSRPTSLVFRP*HCWPRG
Trigger: GCCCCTAGGCCAACAATGTCATGGTCTAAACACCAA...AGACGTGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp TTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCACGTCTGTCCTGGAAATTCCAGTaGGGATCTTCTACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LGQEKGKTWVSQEAGPRLSWKFQ*GSSTSC
Trigger: ACAGCTGGTAGAAGATCCCCACTGGAATTTCCAGGA...CAGACGTGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp AAACCTTTACCAACACCGCATCCCAGCAATAATGGGCCACCTCCCGAGGGCAGAGCTCCTGAAATATCTTaGCCAAGGGGGCACAGTCTG +
Preference number: 4 (lower is better)
Translates to: KPLPTPHPSNNGPPPEGRAPEIS*PRGHSL
Trigger: CAGACTGTGCCCCCTTGGCCAAGATATTTCAGGAGC...TCTGCCCTCGGGAGGTGGCCCATTATTGCTGGGATGCGGTGTTGGTAAAGGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp GGAGAGTCTTGGGCGCTTGGCTCCACGGGAAGCAAACACTTTCCCCTGCGACAGTTGACTCTCTCGATCTaGTGGCATAACTTGATGGCA +
Preference number: 4 (lower is better)
Translates to: GESWALGSTGSKHFPLRQLTLSI*WHNLMA
Trigger: TGCCATCAAGTTATGCCACCAGATCGAGAGAGTCAA...CTGTCGCAGGGGAAAGTGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp AAACCTTTACCAACACCGCATCCCAGCAATAATGGGCCACCTCCCGAGGGCAGAGGAGGCAGAAGATCCTaGGCTTCTGGTTTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: KPLPTPHPSNNGPPPEGRGGRRS*ASGFLV
Trigger: CACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCC...TCTGCCCTCGGGAGGTGGCCCATTATTGCTGGGATGCGGTGTTGGTAAAGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp CACGTGCACAGACAGTGCTCACCCATGGTGACCGCAACTGCACAGAGAAACGCTTTTAAGAAGGCATCTTaGCAGCCACCACAGCGGAAC +
Preference number: 4 (lower is better)
Translates to: HVHRQCSPMVTATAQRNAFKKAS*QPPQRN
Trigger: GTTCCGCTGTGGTGGCTGCCAAGATGCCTTCTTAAA...AGCGTTTCTCTGTGCAGTTGCGGTCACCATGGGTGAGCACTGTCTGTGCACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp CATTGTTGGCCTAGGGGCTATGGTGGCATCGGGGCACGCATGTCAAATCCACTTGTCCCTGTTCTTTTGTaGCCACCACATTCCCTCACC +
Preference number: 4 (lower is better)
Translates to: HCWPRGYGGIGARMSNPLVPVLL*PPHSLT
Trigger: GGTGAGGGAATGTGGTGGCCACAAAAGAACAGGGAC...AAGTGGATTTGACATGCGTGCCCCGATGCCACCATAGCCCCTAGGCCAACAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp AGGGAGACAGAAGTGACATTTGTGCTGCAAGTCCCTGTTCTTTTGTGGCCACCATCCTTCCTGAGCTCCTaGCGGGCCACACACTCTAGC +
Preference number: 4 (lower is better)
Translates to: RETEVTFVLQVPVLLWPPSFLSS*RATHSS
Trigger: GCTAGAGTGTGTGGCCCGCCAGGAGCTCAGGAAGGA...TGGTGGCCACAAAAGAACAGGGACTTGCAGCACAAATGTCACTTCTGTCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
3UTR CAA 72 bp ACATCGCTTCAGCCACACAAAAAGCACTGCTCTGCGTaGGTTAGGCGACACGACCGTCATACTTACTGGGCC +
Preference number: 4 (lower is better)
Translates to: TSLQPHKKHCSA*VRRHDRHTYWA
Trigger: GGCCCAGTAAGTATGACGGTCGTGTCGCCTAACCAACGCAGAGCAGTGCTTTTTGTGTGGCTGAAGCGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
CDS-3UTR TCA 90 bp GGTGGGAGAGGTTCGTGTGGGATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGTTCAACGTGTTTGAATaGTGTGTGGGGAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: GGRGSCGIGELFHFVTVSFNVFE*CVGSST
Trigger: AGTGCTGCTCCCCACACATCATTCAAACACGTTGAA...CGAGACCGTCACGAAATGAAACAACTCCCCGATCCCACACGAACCTCTCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR TCA 90 bp TTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCACGTCTGCAGTCAAGTCACGTATaGGAAATTCTGTCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: LGQEKGKTWVSQEAGPRLQSSHV*EILSSL
Trigger: CAGACTGGACAGAATTTCTCATACGTGACTTGACTG...CAGACGTGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp TTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCACGTCTGGGGTTCTGGGAATCCTaGAGTTCTATTAAGGAACCA +
Preference number: 4 (lower is better)
Translates to: LGQEKGKTWVSQEAGPRLGFWES*SSIKEP
Trigger: TGGTTCCTTAATAGAACTTCAGGATTCCCAGAACCC...CAGACGTGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp CACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCCCAGAAGCGACTGTTCAGGTAAGGGCCTaGGAAACACCTGTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: HVWQGLMHDFNWHSPEATVQVRA*ETPVVD
Trigger: ATCAACCACAGGTGTTTCTCAGGCCCTTACCTGAAC...AGTCGCTTCTGGGGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp TCACAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTCGTAGAAAGCCACTTTaGCTCTCTCGATCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: SQAGGGRRSWASGFLVILRRKPL*LSRSGG
Trigger: GCCACCAGATCGAGAGAGTCAAAGTGGCTTTCTACG...AAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp TTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCACGTCTGACTGCTGCTGTGCTTTaGAAACATGGAAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: LGQEKGKTWVSQEAGPRLTAAVL*KHGNSS
Trigger: TGAGCTGTTTCCATGTTTTCAAAGCACAGCAGCAGT...CAGACGTGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp AGGATGTCGCTGCCAGCTGCATTGCAAAGGAGTTGCCACCAAGATGAAACCGCAACGTCTGGCAGGGTCTaGTGCATGACTTTAACTGGC +
Preference number: 4 (lower is better)
Translates to: RMSLPAALQRSCHQDETATSGRV*CMTLTG
Trigger: GCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGT...TGCGGTTTCATCTTGGTGGCAACTCCTTTGCAATGCAGCTGGCAGCGACATCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp AAGAAGCAGGCCCACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCAGCTTTGTCTGCACGTaGCCTGGCGGATTTAACACA +
Preference number: 4 (lower is better)
Translates to: KKQAHVWQGLMHDFNWHSSFVCT*PGGFNT
Trigger: TGTGTTAAATCCGCCAGGTCACGTGCAGACAAAGCT...GGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTGGGCCTGCTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp GCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTGGCAAAAAGCAGGAAGGGTaGGAAGCCTCTGCTTCCAGT +
Preference number: 4 (lower is better)
Translates to: AGGGRRSWASGFLVILSGKKQEG*EASASS
Trigger: ACTGGAAGCAGAGGCTTCTCACCCTTCCTGCTTTTT...GCCACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp CCTGATTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCAAGAAGAGAGAGGAAGTaGAGCCTTGATTCGCCATCT +
Preference number: 4 (lower is better)
Translates to: PDLGQEKGKTWVSQEAGPRRERK*SLDSPS
Trigger: AGATGGCGAATCAAGGCTTCACTTCCTCTCTCTTCT...TGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAATCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp TCACAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTTCCACTCCAACGGGTTaGTCTCCAGAACCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SQAGGGRRSWASGFLVILSTPTG*SPEPVS
Trigger: AGAGACTGGTTCTGGAGAGCAACCCGTTGGAGTGGA...AAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp CTCCCCAGAAGCGACTGCTGCTGTGCTTTGAAAACATGGAAACAGCTCACAGGCTCCTGCTCGGTGACCTaGTGCAGTGATCCTTCTAAG +
Preference number: 4 (lower is better)
Translates to: LPRSDCCCALKTWKQLTGSCSVT*CSDPSK
Trigger: CTTAGAAGGATCACTGCAGCAGGTCACCGAGCAGGA...GCCTGTGAGCTGTTTCCATGTTTTCAAAGCACAGCAGCAGTCGCTTCTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp CATCAAAGAGAGACGGAGAAGAAACGGTACCATCCAGGGAAGGAATGCGGGGCACATGCCTGGTTCATATaGTGCCAGCTAGGGCAGAAC +
Preference number: 4 (lower is better)
Translates to: HQRETEKKRYHPGKECGAHAWFI*CQLGQN
Trigger: GTTCTGCCCTAGCTGGCAGCATATGAACCAGGCATG...TGCCCCGCATTCCTTCCCTGGATGGTACCGTTTCTTCTCCGTCTCTCTTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp CACTGCTCTGCGTTGGTTAGGCGACACGACCGTCATACTTACTGGGCCAAATCCCAGATTCACTGCTCCTaGTGCATCATGCCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: HCSALVRRHDRHTYWAKSQIHCS*CIMPGS
Trigger: TGAACCAGGCATGATGCAGCAGGAGCAGTGAATCTG...GGATTTGGCCCAGTAAGTATGACGGTCGTGTCGCCTAACCAACGCAGAGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp TTGAAAGTGATGGATGAGTTCCCCACGCTGTGCAGCTCCGTGGTGAAGTTCACTTCTGCTTCCAGTGTCTaGTTGGGAACTGTGGGAGGG +
Preference number: 4 (lower is better)
Translates to: LKVMDEFPTLCSSVVKFTSASSV*LGTVGG
Trigger: CCCTCCCACAGTTCCCAAGCAGACACTGGAAGCAGA...AGTGAACTTCACCACGGAGCTGCACAGCGTGGGGAACTCATCCATCACTTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp AAGAAGCAGGCCCACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCCCACACAAAAAGCACTaGTCTGCGTTGGTTAGGCGA +
Preference number: 4 (lower is better)
Translates to: KKQAHVWQGLMHDFNWHSPHKKH*SALVRR
Trigger: TCGCCTAACCAACGCAGAGCAGTGCTTTTTGTGTGG...GGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTGGGCCTGCTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp CTCCCCAGAAGCGACTGCTGCTGTGCTTTGAAAACATGGAAACAGCTCACAGGCAGAAGCAGGAGTGCTTaGCCGTCAATATCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LPRSDCCCALKTWKQLTGRSRSA*PSISCS
Trigger: GGAGCAGGATATTGACGGCCAAGCACTCCTGCTTCT...GCCTGTGAGCTGTTTCCATGTTTTCAAAGCACAGCAGCAGTCGCTTCTGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp CAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTAGAAGCAGGAGTGCTTaGCCGTCAATATCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: QAGGGRRSWASGFLVILSRSRSA*PSISCS
Trigger: GGAGCAGGATATTGACGGCCAAGCACTCCTGCTTCT...ACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp AAACCTTTACCAACACCGCATCCCAGCAATAATGGGCCACCTCCCGAGGGCAGAACTCTCTCGATCTGGTaGCATAACTTGATGGCAGGC +
Preference number: 4 (lower is better)
Translates to: KPLPTPHPSNNGPPPEGRTLSIW*HNLMAG
Trigger: GCCTGCCATCAAGTTATGCCACCAGATCGAGAGAGT...TCTGCCCTCGGGAGGTGGCCCATTATTGCTGGGATGCGGTGTTGGTAAAGGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp TTGAAAGTGATGGATGAGTTCCCCACGCTGTGCAGCTCCGTGGTGAAGTTCACTAAACAGCTCACAGGCTaGCGGAGGCAGAAGATCCTG +
Preference number: 4 (lower is better)
Translates to: LKVMDEFPTLCSSVVKFTKQLTG*RRQKIL
Trigger: CAGGATCTTCTGCCTCCGCCAGCCTGTGAGCTGTTT...AGTGAACTTCACCACGGAGCTGCACAGCGTGGGGAACTCATCCATCACTTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp TCACAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTTATGGAGATGGCTTCTaGTCCAAGAGGCCAGCCAAC +
Preference number: 4 (lower is better)
Translates to: SQAGGGRRSWASGFLVILYGDGF*SKRPAN
Trigger: GTTGGCTGGCCTCTTGGACCAGAAGCCATCTCCATA...AAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp TTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCACGTCTTCCACAGGGTCTGAGTaGAGATATGGAATCGCTCAT +
Preference number: 4 (lower is better)
Translates to: FGAGERQNVGEPRSRPTSSTGSE*RYGIAH
Trigger: ATGAGCGATTCCATATCTCCACTCAGACCCTGTGGA...AGACGTGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp CTCACAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTGTCCTAAAATCTTTCTaGGCTCTCCTCAAGGACCGG +
Preference number: 4 (lower is better)
Translates to: LTGWRRQKILGFWFSGDTVLKSF*ALLKDR
Trigger: CCGGTCCTTGAGGAGAGCCCAGAAAGATTTTAGGAC...AGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp TGGGAGAGGTTCGTGTGGGATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGAATGGGAGAGGTTCGTGTaGGATCGGGGAGTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: WERFVWDRGVVSFRDGLEWERFV*DRGVVS
Trigger: TGAAACAACTCCCCGATCCCACACGAACCTCTCCCA...TTCGAGACCGTCACGAAATGAAACAACTCCCCGATCCCACACGAACCTCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR TCA 90 bp CCTGATTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCATCCATTTCCATTAGCTaGGCCGAGACACTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: PDLGQEKGKTWVSQEAGPSISIS*AETLFQ
Trigger: TTGGAAAAGTGTCTCGGCTCAGCTAATGGAAATGGA...TGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAATCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp CACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCCCAGAAGCGACTTTCAACGTGTTTGAATaGTGTGTGGGGAGCAGCACT +
Preference number: 4 (lower is better)
Translates to: HVWQGLMHDFNWHSPEATFNVFE*CVGSST
Trigger: AGTGCTGCTCCCCACACATCATTCAAACACGTTGAA...AGTCGCTTCTGGGGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp GGGAGAGGTTCGTGTGGGATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGAAGGGCTGGAAGTTGCTCTaGATGCTGATTTCAACGTGT +
Preference number: 4 (lower is better)
Translates to: GRGSCGIGELFHFVTVSKGWKLL*MLISTC
Trigger: ACACGTTGAAATCAGCATTCAGAGCAACTTCCAGCC...CTTCGAGACCGTCACGAAATGAAACAACTCCCCGATCCCACACGAACCTCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR TCA 90 bp CCTGATTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCACTTCTGGTTTTCTGGTaGTACTTAGTGGCTGTACCA +
Preference number: 4 (lower is better)
Translates to: PDLGQEKGKTWVSQEAGPLLVFW*YLVAVP
Trigger: TGGTACAGCCACTAAGTATCACCAGAAAACCAGAAG...TGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAATCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp CAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTTTTGAAAGTGATGGATaGGTTCCCCACGCTGTGCAG +
Preference number: 4 (lower is better)
Translates to: QAGGGRRSWASGFLVILSFESDG*VPHAVQ
Trigger: CTGCACAGCGTGGGGAACTCATCCATCACTTTCAAA...ACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp CTCACAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTGAGGAAGTGAAGCCTTaGTTCGCCATCTCAATCCAA +
Preference number: 4 (lower is better)
Translates to: LTGWRRQKILGFWFSGDTEEVKP*FAISIQ
Trigger: TTGGATTGAGATGGCGAATCAAGGCTTCACTTCCTC...AGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp CAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTTCACCACCCCACGGGGTaGAAATCCGCGATGACTACG +
Preference number: 4 (lower is better)
Translates to: QETLQHGVRFLPWRHSLFHHPTG*KSAMTT
Trigger: CGTAGTCATCGCGGATTTGCACCCCGTGGGGTGGTG...AAACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp GTGATTACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCCAGGAGGTTGGCGGGTaGTGTCCTCGAACCAGTCAA +
Preference number: 4 (lower is better)
Translates to: VITGNTTAWREVSSLATFQEVGG*CPRTSQ
Trigger: TTGACTGGTTCGAGGACAGCACCCGCCAACCTCCTG...GAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp TCACAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTCCCAGAAGCGACTGCTaGTGTGCTTTGAAAACATGG +
Preference number: 4 (lower is better)
Translates to: SQAGGGRRSWASGFLVILPRSDC*CALKTW
Trigger: CCATGTTTTCAAAGCACAGCAGCAGTCGCTTCTGGG...AAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp TTAACTGGCACTCCCCAGAAGCGACTGCTGCTGTGCTTTGAAAACATGGAAACACTGCTCCAAGGGAGCTaGCTGATTTGGGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LTGTPQKRLLLCFENMETLLQGS*LIWGRR
Trigger: TCTCCTGCCCCAAATCAGGCAGCTCCCTTGGAGCAG...TGTTTCCATGTTTTCAAAGCACAGCAGCAGTCGCTTCTGGGGAGTGCCAGTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp GTGATTACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCCCGGGAGAGAGAGGTTaGAGTGAGCTGAGATTGCGC +
Preference number: 4 (lower is better)
Translates to: VITGNTTAWREVSSLATFPGERG*SELRLR
Trigger: GCGCAATCTCAGCTCACTGCAACCTCTCTCTCCCGG...GAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp GCTGATGTGAAGTCCATCCACCACGACGGAAATCCCCGGAGAATCCAGGCTCAGATTCACTGCTCCTGCTaGATCATGCCTGGTTCATAT +
Preference number: 4 (lower is better)
Translates to: ADVKSIHHDGNPRRIQAQIHCSC*IMPGSY
Trigger: ATATGAACCAGGCATGATGCAGCAGGAGCAGTGAAT...CTGAGCCTGGATTCTCCGGGGATTTCCGTCGTGGTGGATGGACTTCACATCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp GCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTGGCATTCTAGAAATCGACTaGAGGGGAGACCAAAACGCC +
Preference number: 4 (lower is better)
Translates to: AGGGRRSWASGFLVILSGILEID*RGDQNA
Trigger: GGCGTTTTGGTCTCCCCTGCAGTCGATTTCTAGAAT...GCCACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp TGTGCTCGTGTGATTACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGAGCTTAAAGGAGAGATaGCCGGGGCAAGCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: CARVITGNTTAWREVSSLSLKER*PGQASH
Trigger: GTGGCTGGCTTGCCCCGGGCATCTCTCCTTTAAGCT...CAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCACACGAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp CATTGTTGGCCTAGGGGCTATGGTGGCATCGGGGCACGCATGTCAAATCCACTTTCAGCGCGGGGAAAATaGCAAAGATCTGGAAATGGA +
Preference number: 4 (lower is better)
Translates to: HCWPRGYGGIGARMSNPLSARGK*QRSGNG
Trigger: TCCATTTCCAGATCTTTGGCATTTTCCCCGCGCTGA...AAGTGGATTTGACATGCGTGCCCCGATGCCACCATAGCCCCTAGGCCAACAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp AGCTGTAAGAATGGCCGAGTCAGAACTGGGACCAGACCCTTCTTATTCTTTCTTCTCCTCCCTGGCACGTaGACAGACAGTGCTCACCCA +
Preference number: 4 (lower is better)
Translates to: SCKNGRVRTGTRPFLFFLLLPGT*TDSAHP
Trigger: TGGGTGAGCACTGTCTGTGCACGTGCCAGGGAGGAG...AAGAAAGAATAAGAAGGGTCTGGTCCCAGTTCTGACTCGGCCATTCTTACAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp CTCACAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTAGAACCCAGAAGCCGTaGAGCTCAAATACTGTGTCT +
Preference number: 4 (lower is better)
Translates to: LTGWRRQKILGFWFSGDTRTQKP*SSNTVS
Trigger: AGACACAGTATTTGAGCTGCACGGCTTCTGGGTTCT...AGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp GGGAGAGGTTCGTGTGGGATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGAAGTGTTTGAATGATGTGTaGGGAGCAGCACTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GRGSCGIGELFHFVTVSKCLNDV*GAALAP
Trigger: AGGAGCAAGTGCTGCTCCCCACACATCATTCAAACA...CTTCGAGACCGTCACGAAATGAAACAACTCCCCGATCCCACACGAACCTCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR CCA 90 bp TTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCACGTCTGAATGGAGCAGTTCTCTaGGCAGTTTTCAGATATCAG +
Preference number: 4 (lower is better)
Translates to: LGQEKGKTWVSQEAGPRLNGAVL*AVFRYQ
Trigger: CTGATATCTGAAAACTGCCCAGAGAACTGCTCCATT...CAGACGTGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp GGAAATGGATGCCCTTTCCAATCGTTTGACAGAGTTGAACTCCACAAGACTGAGAGCCGGTCTCCTCACTaGCGGTGTCATCGTCCATGG +
Preference number: 4 (lower is better)
Translates to: GNGCPFQSFDRVELHKTESRSPH*RCHRPW
Trigger: CCATGGACGATGACACCGCCAGTGAGGAGACCGGCT...CTCAGTCTTGTGGAGTTCAACTCTGTCAAACGATTGGAAAGGGCATCCATTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp CATCAAAGAGAGACGGAGAAGAAACGGTACCATCCAGGGAAGGAATGCGGGGCAACTCTCTCGATCTGGTaGCATAACTTGATGGCAGGC +
Preference number: 4 (lower is better)
Translates to: HQRETEKKRYHPGKECGATLSIW*HNLMAG
Trigger: GCCTGCCATCAAGTTATGCCACCAGATCGAGAGAGT...TGCCCCGCATTCCTTCCCTGGATGGTACCGTTTCTTCTCCGTCTCTCTTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp CCTGATTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCATTGACTCTCTCGATCTaGTGGCATAACTTGATGGCA +
Preference number: 4 (lower is better)
Translates to: PDLGQEKGKTWVSQEAGPLTLSI*WHNLMA
Trigger: TGCCATCAAGTTATGCCACCAGATCGAGAGAGTCAA...TGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAATCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp GTGATTACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCAAGCAGGCCCACGTCTaGCAGGGTCTGATGCATGAC +
Preference number: 4 (lower is better)
Translates to: VITGNTTAWREVSSLATFKQAHV*QGLMHD
Trigger: GTCATGCATCAGACCCTGCCAGACGTGGGCCTGCTT...GAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp AAACCTTTACCAACACCGCATCCCAGCAATAATGGGCCACCTCCCGAGGGCAGAGGTGAGACTGAGCGATaGGCTGTCATGATTCAAGTT +
Preference number: 4 (lower is better)
Translates to: KPLPTPHPSNNGPPPEGRGETER*AVMIQV
Trigger: AACTTGAATCATGACAGCCCATCGCTCAGTCTCACC...TCTGCCCTCGGGAGGTGGCCCATTATTGCTGGGATGCGGTGTTGGTAAAGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp GGGAGAGGTTCGTGTGGGATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGAAGTCCATTTCCATTAGCTaGGCCGAGACACTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: GRGSCGIGELFHFVTVSKSISIS*AETLFQ
Trigger: TTGGAAAAGTGTCTCGGCTCAGCTAATGGAAATGGA...CTTCGAGACCGTCACGAAATGAAACAACTCCCCGATCCCACACGAACCTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR TCA 90 bp CACTGCTCTGCGTTGGTTAGGCGACACGACCGTCATACTTACTGGGCCAAATCCGGGTTCTGGGAATCCTaGAGTTCTATTAAGGAACCA +
Preference number: 4 (lower is better)
Translates to: HCSALVRRHDRHTYWAKSGFWES*SSIKEP
Trigger: TGGTTCCTTAATAGAACTTCAGGATTCCCAGAACCC...GGATTTGGCCCAGTAAGTATGACGGTCGTGTCGCCTAACCAACGCAGAGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp AAGAAGCAGGCCCACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCATTCCACATCAACAATaGCCTCTGGAACAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: KKQAHVWQGLMHDFNWHSIPHQQ*PLEQES
Trigger: AGACTCCTGTTCCAGAGGTCATTGTTGATGTGGAAT...GGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTGGGCCTGCTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp GCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTGGCACTGCTGCTGTGCTTTaGAAACATGGAAACAGCTCA +
Preference number: 4 (lower is better)
Translates to: AGGGRRSWASGFLVILSGTAAVL*KHGNSS
Trigger: TGAGCTGTTTCCATGTTTTCAAAGCACAGCAGCAGT...GCCACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp GGTTCGTGTGGGATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGAAGAAGTTTGGGTTGGTTTATGTTTaGGGGTGGTGGGAGAGGTTC +
Preference number: 4 (lower is better)
Translates to: GSCGIGELFHFVTVSKKFGLVYV*GWWERF
Trigger: GAACCTCTCCCACCACCCTCAAACATAAACCAACCC...AAACTTCTTCGAGACCGTCACGAAATGAAACAACTCCCCGATCCCACACGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR GCA 90 bp CTCCCCAGAAGCGACTGCTGCTGTGCTTTGAAAACATGGAAACAGCTCACAGGCACAAAGTGCTCTCCATaGCTGATGAGCAAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: LPRSDCCCALKTWKQLTGTKCSP*LMSKCL
Trigger: GAGACACTTGCTCATCAGGCATGGAGAGCACTTTGT...GCCTGTGAGCTGTTTCCATGTTTTCAAAGCACAGCAGCAGTCGCTTCTGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp GATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGAAGAAGTTTTGAGACATCCTCGCAGAAGCAGCAGCTaGCCGCACGTGGTAATGATC +
Preference number: 4 (lower is better)
Translates to: DRGVVSFRDGLEEVLRHPRRSSS*PHVVMI
Trigger: GATCATTACCACGTGCGGGCAGCTGCTGCTTCTGCG...AGGATGTCTCAAAACTTCTTCGAGACCGTCACGAAATGAAACAACTCCCCGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR GCA 90 bp GATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGAAGAAGTTTTGAGACATCCTCCTTGTTGTTCTGTGTaGACCACCCCACGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: DRGVVSFRDGLEEVLRHPPCCSV*TTPRGA
Trigger: TGCACCCCGTGGGGTGGTGCACACAGAACAACAAGG...AGGATGTCTCAAAACTTCTTCGAGACCGTCACGAAATGAAACAACTCCCCGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR GCA 90 bp CAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTTCAGGAGGTTGGCGGGTaGTGTCCTCGAACCAGTCAA +
Preference number: 4 (lower is better)
Translates to: QETLQHGVRFLPWRHSLFQEVGG*CPRTSQ
Trigger: TTGACTGGTTCGAGGACAGCACCCGCCAACCTCCTG...AAACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp CCTGATTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCACTCTGGTTGCACGACTaGAATCTTTCTCTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: PDLGQEKGKTWVSQEAGPLWLHD*NLSLLL
Trigger: CAAAAGAAGAGAAAGATTGCAGTCGTGCAACCAGAG...TGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAATCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp GGAGACAGAAGTGACATTTGTGCTGCAAGTCCCTGTTCTTTTGTGGCCACCACAGCTCCTGCTGCATCATaGCTGGTTCATATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: GDRSDICAASPCSFVATTAPAAS*LVHMLP
Trigger: TGGCAGCATATGAACCAGGCATGATGCAGCAGGAGC...TGTGGTGGCCACAAAAGAACAGGGACTTGCAGCACAAATGTCACTTCTGTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp CCTGATTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCAAAGGGTCTTGCATATTaGAAGCTGACAAAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: PDLGQEKGKTWVSQEAGPKGLAY*KLTKCS
Trigger: AGAGCACTTTGTCAGCTTCCAATATGCAAGACCCTT...TGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAATCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp CAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTTGTTTGAATGATGTGTaGGGAGCAGCACTTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QAGGGRRSWASGFLVILSCLNDV*GAALAP
Trigger: AGGAGCAAGTGCTGCTCCCCACACATCATTCAAACA...ACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp CTCACAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTAAGGCACCACTGTACTaGCAAAATCCCCAAAGAATC +
Preference number: 4 (lower is better)
Translates to: LTGWRRQKILGFWFSGDTKAPLY*QNPQRI
Trigger: GATTCTTTGGGGATTTTGCCAGTACAGTGGTGCCTT...AGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp AAACCTTTACCAACACCGCATCCCAGCAATAATGGGCCACCTCCCGAGGGCAGACGGCAATTGTTTCTCTaGTTGCACGACTGCAATCTT +
Preference number: 4 (lower is better)
Translates to: KPLPTPHPSNNGPPPEGRRQLFL*LHDCNL
Trigger: AAGATTGCAGTCGTGCAACCAGAGAAACAATTGCCG...TCTGCCCTCGGGAGGTGGCCCATTATTGCTGGGATGCGGTGTTGGTAAAGGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp AAGAAGCAGGCCCACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCCGGCAATTGTTTCTCTaGTTGCACGACTGCAATCTT +
Preference number: 4 (lower is better)
Translates to: KKQAHVWQGLMHDFNWHSRQLFL*LHDCNL
Trigger: AAGATTGCAGTCGTGCAACCAGAGAAACAATTGCCG...GGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTGGGCCTGCTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp GCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTGGCTTTTGCCTCTGTATTTaGCCTTCAGCGTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: AGGGRRSWASGFLVILSGFCLCI*PSASLP
Trigger: AGGAAGAGACGCTGAAGGCCAAATACAGAGGCAAAA...GCCACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp CACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCCCAGAAGCGACTTTTTGCCTCTGTATTTaGCCTTCAGCGTCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: HVWQGLMHDFNWHSPEATFCLCI*PSASLP
Trigger: AGGAAGAGACGCTGAAGGCCAAATACAGAGGCAAAA...AGTCGCTTCTGGGGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp GCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTGGCTGGTTTTGGTATGAATaGAGCAGTTCTCTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: AGGGRRSWASGFLVILSGWFWYE*SSSLGS
Trigger: ACTGCCCAGAGAACTGCTCCATTCATACCAAAACCA...GCCACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp CCTGATTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCATCAAAGTTTCAGTCCTaGAAACCTTTACCAACACCG +
Preference number: 4 (lower is better)
Translates to: PDLGQEKGKTWVSQEAGPSKFQS*KPLPTP
Trigger: CGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGA...TGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAATCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp TTAACTGGCACTCCCCAGAAGCGACTGCTGCTGTGCTTTGAAAACATGGAAACAAAACAGCTCACAGGCTaGCGGAGGCAGAAGATCCTG +
Preference number: 4 (lower is better)
Translates to: LTGTPQKRLLLCFENMETKQLTG*RRQKIL
Trigger: CAGGATCTTCTGCCTCCGCCAGCCTGTGAGCTGTTT...TGTTTCCATGTTTTCAAAGCACAGCAGCAGTCGCTTCTGGGGAGTGCCAGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp CAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTATGCATGACTTTAACTaGCACTCCCCAGAAGCGACT +
Preference number: 4 (lower is better)
Translates to: QAGGGRRSWASGFLVILSMHDFN*HSPEAT
Trigger: AGTCGCTTCTGGGGAGTGCCAGTTAAAGTCATGCAT...ACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp GGAAATGGATGCCCTTTCCAATCGTTTGACAGAGTTGAACTCCACAAGACTGAGAAGCAGGCCCACGTCTaGCAGGGTCTGATGCATGAC +
Preference number: 4 (lower is better)
Translates to: GNGCPFQSFDRVELHKTEKQAHV*QGLMHD
Trigger: GTCATGCATCAGACCCTGCCAGACGTGGGCCTGCTT...CTCAGTCTTGTGGAGTTCAACTCTGTCAAACGATTGGAAAGGGCATCCATTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp AGGATGTCGCTGCCAGCTGCATTGCAAAGGAGTTGCCACCAAGATGAAACCGCAGTCACTTCACAGGAATaGAGGTCCAGAGTGATGAGA +
Preference number: 4 (lower is better)
Translates to: RMSLPAALQRSCHQDETAVTSQE*RSRVMR
Trigger: TCTCATCACTCTGGACCTCCATTCCTGTGAAGTGAC...TGCGGTTTCATCTTGGTGGCAACTCCTTTGCAATGCAGCTGGCAGCGACATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp TGTGCTCGTGTGATTACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGAGAGTCTTGGGCGCTTaGCTCCACGGGAAGCAAACA +
Preference number: 4 (lower is better)
Translates to: CARVITGNTTAWREVSSLRVLGA*LHGKQT
Trigger: TGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCT...CAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCACACGAGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp TCACAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTTTCCTCCAAGCTTaGGCCTTCTTCAGAATCAAG +
Preference number: 4 (lower is better)
Translates to: SQAGGGRRSWASGFLVILSFLQA*AFFRIK
Trigger: CTTGATTCTGAAGAAGGCTCAAGCTTGGAGGAAACT...AAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp CAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTGCTTCATCCCAACTGTaGAGAAATGGCTTCGCAAAT +
Preference number: 4 (lower is better)
Translates to: QAGGGRRSWASGFLVILSASSQL*RNGFAN
Trigger: ATTTGCGAAGCCATTTCTTCACAGTTGGGATGAAGC...ACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp ACATATCCCGGAAAATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATCCCGGTCCCACCGACTaGGGTAGCTCTGCAATCCTT +
Preference number: 4 (lower is better)
Translates to: TYPGKSKFQSWKPLPTPHPGPTD*GSSAIL
Trigger: AAGGATTGCAGAGCTACCTCAGTCGGTGGGACCGGG...ATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATTTTCCGGGATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp AGCTGTAAGAATGGCCGAGTCAGAACTGGGACCAGACCCTTCTTATTCTTTCTTTCTGGTGGCATAACTTaGTGGCAGGCCCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: SCKNGRVRTGTRPFLFFLSGGIT*WQAPAS
Trigger: TGAAGCTGGGGCCTGCCATCAAGTTATGCCACCAGA...AAGAAAGAATAAGAAGGGTCTGGTCCCAGTTCTGACTCGGCCATTCTTACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp CAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTTCACTACAGCATGGCGTaGGGTTTCTTCCTTGGCGAC +
Preference number: 4 (lower is better)
Translates to: QETLQHGVRFLPWRHSLFHYSMA*GFFLGD
Trigger: GTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTG...AAACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp GTGATTACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCGAGTTGCCACCAAGATaGAACCGCAAGTGCCACTCA +
Preference number: 4 (lower is better)
Translates to: VITGNTTAWREVSSLATFELPPR*NRKCHS
Trigger: TGAGTGGCACTTGCGGTTTCATCTTGGTGGCAACTC...GAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp AAACCTTTACCAACACCGCATCCCAGCAATAATGGGCCACCTCCCGAGGGCAGATTGAAAAGGCCACAGTaGAGGATCATCAAAGAGTCA +
Preference number: 4 (lower is better)
Translates to: KPLPTPHPSNNGPPPEGRLKRPQ*RIIKES
Trigger: TGACTCTTTGATGATCCTTCACTGTGGCCTTTTCAA...TCTGCCCTCGGGAGGTGGCCCATTATTGCTGGGATGCGGTGTTGGTAAAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp CTCACAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTGTCATGATTCAAGTTaGGGTGGCATCTCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: LTGWRRQKILGFWFSGDTCHDSS*GGISFS
Trigger: TGAGAAAGAGATGCCACCTCAACTTGAATCATGACA...AGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp GGAGACAGAAGTGACATTTGTGCTGCAAGTCCCTGTTCTTTTGTGGCCACCACATGTGCAGCTCCGTGGTaGAGTTCACTGTGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: GDRSDICAASPCSFVATTCAAPW*SSLCFA
Trigger: AGCAAAACACAGTGAACTTCACCACGGAGCTGCACA...TGTGGTGGCCACAAAAGAACAGGGACTTGCAGCACAAATGTCACTTCTGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp TCCACCACGACGGAAATCCCCGGAGAATCCAGGCTCAGAAGGACACTGGCAACACTCAAATACTGTGTCTaGCTCCAACTTGGATCAAAT +
Preference number: 4 (lower is better)
Translates to: STTTEIPGESRLRRTLATLKYCV*LQLGSN
Trigger: ATTTGATCCAAGTTGGAGTCAGACACAGTATTTGAG...TGTTGCCAGTGTCCTTCTGAGCCTGGATTCTCCGGGGATTTCCGTCGTGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp GGTGGGAGAGGTTCGTGTGGGATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGGAAGATGAAGGGTCTTaGATATTGGAAGCTGACAAA +
Preference number: 4 (lower is better)
Translates to: GGRGSCGIGELFHFVTVSEDEGS*ILEADK
Trigger: TTTGTCAGCTTCCAATATGCAAGACCCTTCATCTTC...CGAGACCGTCACGAAATGAAACAACTCCCCGATCCCACACGAACCTCTCCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR GCA 90 bp GAAACGACACCCATCTTCAAAAGGCTGATCAAAATCAACCTTCTAGAGAGGGCACGCAGAAGCAGCAGCTaGCCGCACGTGGTAATGATC +
Preference number: 4 (lower is better)
Translates to: ETTPIFKRLIKINLLERARRSSS*PHVVMI
Trigger: GATCATTACCACGTGCGGGCAGCTGCTGCTTCTGCG...TGCCCTCTCTAGAAGGTTGATTTTGATCAGCCTTTTGAAGATGGGTGTCGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp TTAACTGGCACTCCCCAGAAGCGACTGCTGCTGTGCTTTGAAAACATGGAAACACTGCTTGTGATAATCTaGCCAGTCGAAGTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LTGTPQKRLLLCFENMETLLVII*PVEVLA
Trigger: GGCCAGGACTTCGACTGGGCAGATTATCACAAGCAG...TGTTTCCATGTTTTCAAAGCACAGCAGCAGTCGCTTCTGGGGAGTGCCAGTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp GCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTGGCCTCTGGTTGCACGACTaGAATCTTTCTCTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: AGGGRRSWASGFLVILSGLWLHD*NLSLLL
Trigger: CAAAAGAAGAGAAAGATTGCAGTCGTGCAACCAGAG...GCCACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp TCACAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTGACCTCCGTTTCTTCTaGACGAAAATGGATTTCCGT +
Preference number: 4 (lower is better)
Translates to: SQAGGGRRSWASGFLVILDLRFF*TKMDFR
Trigger: ACGGAAATCCATTTTCGTGCAGAAGAAACGGAGGTC...AAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp AAACCTTTACCAACACCGCATCCCAGCAATAATGGGCCACCTCCCGAGGGCAGAAAGCGACTGCTGCTGTaGTTTGAAAACATGGAAACA +
Preference number: 4 (lower is better)
Translates to: KPLPTPHPSNNGPPPEGRKRLLL*FENMET
Trigger: TGTTTCCATGTTTTCAAAGCACAGCAGCAGTCGCTT...TCTGCCCTCGGGAGGTGGCCCATTATTGCTGGGATGCGGTGTTGGTAAAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp GCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTGGCAAGCGACTGCTGCTGTaGTTTGAAAACATGGAAACA +
Preference number: 4 (lower is better)
Translates to: AGGGRRSWASGFLVILSGKRLLL*FENMET
Trigger: TGTTTCCATGTTTTCAAAGCACAGCAGCAGTCGCTT...GCCACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp GGAGACAGAAGTGACATTTGTGCTGCAAGTCCCTGTTCTTTTGTGGCCACCACAAACAAACCATCTAGTTaGATGGAGATGCCTGCCGGC +
Preference number: 4 (lower is better)
Translates to: GDRSDICAASPCSFVATTNKPSS*MEMPAG
Trigger: GCCGGCAGGCATCTCCATGCAACTAGATGGTTTGTT...TGTGGTGGCCACAAAAGAACAGGGACTTGCAGCACAAATGTCACTTCTGTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp AAACCTTTACCAACACCGCATCCCAGCAATAATGGGCCACCTCCCGAGGGCAGAAAGGGTCTTGCATATTaGAAGCTGACAAAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: KPLPTPHPSNNGPPPEGRKGLAY*KLTKCS
Trigger: AGAGCACTTTGTCAGCTTCCAATATGCAAGACCCTT...TCTGCCCTCGGGAGGTGGCCCATTATTGCTGGGATGCGGTGTTGGTAAAGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp GAAAGAGCTGTAAGAATGGCCGAGTCAGAACTGGGACCAGACCCTTCTTATTCTCACACACAGTTCTCCTaGATTCCTGGGGTTCACAGC +
Preference number: 4 (lower is better)
Translates to: ERAVRMAESELGPDPSYSHTQFS*IPGVHS
Trigger: GCTGTGAACCCCAGGAATCCAGGAGAACTGTGTGTG...AGAATAAGAAGGGTCTGGTCCCAGTTCTGACTCGGCCATTCTTACAGCTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp AAACCTTTACCAACACCGCATCCCAGCAATAATGGGCCACCTCCCGAGGGCAGACAGAAATTTGCGACTTaGTCAGATGTCCGTACGATT +
Preference number: 4 (lower is better)
Translates to: KPLPTPHPSNNGPPPEGRQKFAT*SDVRTI
Trigger: AATCGTACGGACATCTGACCAAGTCGCAAATTTCTG...TCTGCCCTCGGGAGGTGGCCCATTATTGCTGGGATGCGGTGTTGGTAAAGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp AAGAAGCAGGCCCACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCAATGGAGCAGTTCTCTaGGCAGTTTTCAGATATCAG +
Preference number: 4 (lower is better)
Translates to: KKQAHVWQGLMHDFNWHSNGAVL*AVFRYQ
Trigger: CTGATATCTGAAAACTGCCCAGAGAACTGCTCCATT...GGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTGGGCCTGCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp CAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTTGGTTGCTTTCCCCGATaGGGGGCTTGGAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: QETLQHGVRFLPWRHSLFGCFPR*GAWRSS
Trigger: AGAAGATCTCCAAGCCCCCCATCGGGGAAAGCAACC...AAACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp TGTGCTCGTGTGATTACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCTCCTGAAATATCTTaGCCAAGGGGGCACAGTCTG +
Preference number: 4 (lower is better)
Translates to: CARVITGNTTAWREVSSLAPEIS*PRGHSL
Trigger: CAGACTGTGCCCCCTTGGCCAAGATATTTCAGGAGC...CAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCACACGAGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp CACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCCCAGAAGCGACTTCAAAGTTTCAGTCCTaGAAACCTTTACCAACACCG +
Preference number: 4 (lower is better)
Translates to: HVWQGLMHDFNWHSPEATSKFQS*KPLPTP
Trigger: CGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGA...AGTCGCTTCTGGGGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp AAACCTTTACCAACACCGCATCCCAGCAATAATGGGCCACCTCCCGAGGGCAGAACCGCAGAATTTTACTaGAACTGTGGAGACTCTAGT +
Preference number: 4 (lower is better)
Translates to: KPLPTPHPSNNGPPPEGRTAEFY*NCGDSS
Trigger: ACTAGAGTCTCCACAGTTCCAGTAAAATTCTGCGGT...TCTGCCCTCGGGAGGTGGCCCATTATTGCTGGGATGCGGTGTTGGTAAAGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp TTGAAAGTGATGGATGAGTTCCCCACGCTGTGCAGCTCCGTGGTGAAGTTCACTCCAATAAGTTCCAAGTaGCATGATGCCCACAGGAAG +
Preference number: 4 (lower is better)
Translates to: LKVMDEFPTLCSSVVKFTPISSK*HDAHRK
Trigger: CTTCCTGTGGGCATCATGCCACTTGGAACTTATTGG...AGTGAACTTCACCACGGAGCTGCACAGCGTGGGGAACTCATCCATCACTTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp CACGTGCACAGACAGTGCTCACCCATGGTGACCGCAACTGCACAGAGAAACGCTTTAGAAAGGGGTGTTTaGCATAAGACAGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: HVHRQCSPMVTATAQRNALERGV*HKTEGK
Trigger: TTTGCCTTCTGTCTTATGCCAAACACCCCTTTCTAA...AGCGTTTCTCTGTGCAGTTGCGGTCACCATGGGTGAGCACTGTCTGTGCACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
3UTR CAA 72 bp GTGTCTGCTTGGGAACTGTGGGAGGGTTTGGTTTCCTaGCATAAGTTTAAGAAGGCATCTTGGCAGCCACCA +
Preference number: 4 (lower is better)
Translates to: VSAWELWEGLVS*HKFKKASWQPP
Trigger: TGGTGGCTGCCAAGATGCCTTCTTAAACTTATGCAAGGAAACCAAACCCTCCCACAGTTCCCAAGCAGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
CDS-3UTR TCA 90 bp AAATGCTCCATGAAATTGGCCCTACCTTTAAGACAGACGCTGGTGAGAGGTGAAGGTGCAAATCCGCGATaGCTACGTCACACCAGAAGT +
Preference number: 4 (lower is better)
Translates to: KCSMKLALPLRQTLVRGEGANPR*LRHTRS
Trigger: ACTTCTGGTGTGACGTAGTCATCGCGGATTTGCACC...TTCACCTCTCACCAGCGTCTGTCTTAAAGGTAGGGCCAATTTCATGGAGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp GATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGAAGAAGTTTTGAGACATCCTGGTGCAAATCCGCGATaGCTACGTCACACCAGAAGT +
Preference number: 4 (lower is better)
Translates to: DRGVVSFRDGLEEVLRHPGANPR*LRHTRS
Trigger: ACTTCTGGTGTGACGTAGTCATCGCGGATTTGCACC...AGGATGTCTCAAAACTTCTTCGAGACCGTCACGAAATGAAACAACTCCCCGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR TCA 90 bp ACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTAGCAGTATTTCCCGTTaGCGGTTCCTGTGGTGTCCA +
Preference number: 4 (lower is better)
Translates to: TGNTTAWREVSSLATFFVSSISR*RFLWCP
Trigger: TGGACACCACAGGAACCGTCAACGGGAAATACTGCT...AACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp ACATATCCCGGAAAATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATAAGGCAAAACGTGGGTaGGCCAAGAAGCAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: TYPGKSKFQSWKPLPTPHKAKRG*AKKQAH
Trigger: GTGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTT...ATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATTTTCCGGGATATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp CACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCCCAGAAGCGACTATAAATGTGCTCGTGTaGTTACAGGAAACACTACAG +
Preference number: 4 (lower is better)
Translates to: HVWQGLMHDFNWHSPEATINVLV*LQETLQ
Trigger: CTGTAGTGTTTCCTGTAATCACACGAGCACATTTAT...AGTCGCTTCTGGGGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp CACGTGCACAGACAGTGCTCACCCATGGTGACCGCAACTGCACAGAGAAACGCTTTTCCAAAATCCCACTaGGAATCATATCTGGAAATG +
Preference number: 4 (lower is better)
Translates to: HVHRQCSPMVTATAQRNAFPKSH*ESYLEM
Trigger: CATTTCCAGATATGATTCTCAGTGGGATTTTGGAAA...AGCGTTTCTCTGTGCAGTTGCGGTCACCATGGGTGAGCACTGTCTGTGCACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp GGAGACAGAAGTGACATTTGTGCTGCAAGTCCCTGTTCTTTTGTGGCCACCACAGACGCTGGTGAGAGGTaGATCCTACAGAGAAATGAA +
Preference number: 4 (lower is better)
Translates to: GDRSDICAASPCSFVATTDAGER*ILQRNE
Trigger: TTCATTTCTCTGTAGGATTCACCTCTCACCAGCGTC...TGTGGTGGCCACAAAAGAACAGGGACTTGCAGCACAAATGTCACTTCTGTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp GATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGAAGAAGTTTTGAGACATCCTCAGAAGCTGATGGCTTaGCATCACTCTCTACGTCCG +
Preference number: 4 (lower is better)
Translates to: DRGVVSFRDGLEEVLRHPQKLMA*HHSLRP
Trigger: CGGACGTAGAGAGTGATGTCAAGCCATCAGCTTCTG...AGGATGTCTCAAAACTTCTTCGAGACCGTCACGAAATGAAACAACTCCCCGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR TCA 90 bp AGAGGTTCGTGTGGGATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGAAGAAGATGTTGAACAGAAGCTaGTGGCTTGACATCACTCTC +
Preference number: 4 (lower is better)
Translates to: RGSCGIGELFHFVTVSKKMLNRS*WLDITL
Trigger: GAGAGTGATGTCAAGCCATCAGCTTCTGTTCAACAT...CTTCTTCGAGACCGTCACGAAATGAAACAACTCCCCGATCCCACACGAACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR GCA 90 bp CACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCCCAGAAGCGACTGAAGATGAAGGGTCTTaGATATTGGAAGCTGACAAA +
Preference number: 4 (lower is better)
Translates to: HVWQGLMHDFNWHSPEATEDEGS*ILEADK
Trigger: TTTGTCAGCTTCCAATATGCAAGACCCTTCATCTTC...AGTCGCTTCTGGGGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp CATCAAAGAGAGACGGAGAAGAAACGGTACCATCCAGGGAAGGAATGCGGGGCAATGGCTTCGCAAATCTaGGTGATCCTTAAACACTTC +
Preference number: 4 (lower is better)
Translates to: HQRETEKKRYHPGKECGAMASQI*VILKHF
Trigger: GAAGTGTTTAAGGATCACGCAGATTTGCGAAGCCAT...TGCCCCGCATTCCTTCCCTGGATGGTACCGTTTCTTCTCCGTCTCTCTTTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp AAGAAGCAGGCCCACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCAATTGTTTCTCTGGTTaGACGACTGCAATCTTTCTC +
Preference number: 4 (lower is better)
Translates to: KKQAHVWQGLMHDFNWHSNCFSG*TTAIFL
Trigger: GAGAAAGATTGCAGTCGTGCAACCAGAGAAACAATT...GGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTGGGCCTGCTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp AAATGCTCCATGAAATTGGCCCTACCTTTAAGACAGACGCTGGTGAGAGGTGAAGGTCAGAAGCAGGAGTaGTTGGCCGTCAATATCCTG +
Preference number: 4 (lower is better)
Translates to: KCSMKLALPLRQTLVRGEGQKQE*LAVNIL
Trigger: CAGGATATTGACGGCCAAGCACTCCTGCTTCTGACC...TTCACCTCTCACCAGCGTCTGTCTTAAAGGTAGGGCCAATTTCATGGAGCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp ACATATCCCGGAAAATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATCTGCTCCAAGGGAGCTaGCTGATTTGGGGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: TYPGKSKFQSWKPLPTPHLLQGS*LIWGRR
Trigger: TCTCCTGCCCCAAATCAGGCAGCTCCCTTGGAGCAG...ATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATTTTCCGGGATATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp GCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTGGCTTCCAATTTCATTCCTaGCTGGAAGTTGCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: AGGGRRSWASGFLVILSGFQFHS*LEVALN
Trigger: ATTCAGAGCAACTTCCAGCCAGGAATGAAATTGGAA...GCCACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp CAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTTTGACACCAACCAACTaGTCGAAGTCTGTAATCCAA +
Preference number: 4 (lower is better)
Translates to: QAGGGRRSWASGFLVILSLTPTN*SKSVIQ
Trigger: TTGGATTACAGACTTCGACCAGTTGGTTGGTGTCAA...ACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp CAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTTCACACACAGTTCTCCTaGATTCCTGGGGTTCACAGC +
Preference number: 4 (lower is better)
Translates to: QETLQHGVRFLPWRHSLFHTQFS*IPGVHS
Trigger: GCTGTGAACCCCAGGAATCCAGGAGAACTGTGTGTG...AAACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp CCTGATTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCAAGGTGTATTTGGTTTTaGTATGAATGGAGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: PDLGQEKGKTWVSQEAGPRCIWF*YEWSSS
Trigger: AGAACTGCTCCATTCATACCAAAACCAAATACACCT...TGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAATCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp ACATATCCCGGAAAATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATCGGTGTCATCGTCCATaGCGTCAGCGTCCTCCTCTT +
Preference number: 4 (lower is better)
Translates to: TYPGKSKFQSWKPLPTPHRCHRP*RQRPPL
Trigger: AAGAGGAGGACGCTGACGCCATGGACGATGACACCG...ATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATTTTCCGGGATATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp GAAACGACACCCATCTTCAAAAGGCTGATCAAAATCAACCTTCTAGAGAGGGCAGAGGGCAGACTCAGTTaGCGTACTGGGCGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: ETTPIFKRLIKINLLERAEGRLS*RTGRRK
Trigger: CTTTCTACGCCCAGTACGCCAACTGAGTCTGCCCTC...TGCCCTCTCTAGAAGGTTGATTTTGATCAGCCTTTTGAAGATGGGTGTCGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp AGCTGTAAGAATGGCCGAGTCAGAACTGGGACCAGACCCTTCTTATTCTTTCTTGGAGGCAGAAGATCCTaGGCTTCTGGTTTTCTGGTG +
Preference number: 4 (lower is better)
Translates to: SCKNGRVRTGTRPFLFFLGGRRS*ASGFLV
Trigger: CACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCC...AAGAAAGAATAAGAAGGGTCTGGTCCCAGTTCTGACTCGGCCATTCTTACAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp GGAAATGGATGCCCTTTCCAATCGTTTGACAGAGTTGAACTCCACAAGACTGAGGAGAAAGGCAAAACGTaGGTGAGCCAAGAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GNGCPFQSFDRVELHKTEEKGKT*VSQEAG
Trigger: GCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTC...CTCAGTCTTGTGGAGTTCAACTCTGTCAAACGATTGGAAAGGGCATCCATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp GTGATTACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCCTGCTGCATCATGCCTaGTTCATATGCTGCCAGCTA +
Preference number: 4 (lower is better)
Translates to: VITGNTTAWREVSSLATFLLHHA*FICCQL
Trigger: TAGCTGGCAGCATATGAACCAGGCATGATGCAGCAG...GAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp CAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTTAACCAGGGTGCCAAGTaGCTGACTCCAGATTCACTG +
Preference number: 4 (lower is better)
Translates to: QETLQHGVRFLPWRHSLFNQGAK*LTPDSL
Trigger: CAGTGAATCTGGAGTCAGCCACTTGGCACCCTGGTT...AAACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp TTGAAAGTGATGGATGAGTTCCCCACGCTGTGCAGCTCCGTGGTGAAGTTCACTTTCCAGAGATCATGCTaGCTCCTGTTTCAAGCAAGT +
Preference number: 4 (lower is better)
Translates to: LKVMDEFPTLCSSVVKFTFQRSC*LLFQAS
Trigger: ACTTGCTTGAAACAGGAGCCAGCATGATCTCTGGAA...AGTGAACTTCACCACGGAGCTGCACAGCGTGGGGAACTCATCCATCACTTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
3UTR CAA 72 bp ACAGAAGTGACATTTGTGCTGCAAGTCCCTGTTCTTTaGTGGCCACCACATTCCCTCACCCTCGTCTCAAAT +
Preference number: 4 (lower is better)
Translates to: TEVTFVLQVPVL*WPPHSLTLVSN
Trigger: ATTTGAGACGAGGGTGAGGGAATGTGGTGGCCACAAAAGAACAGGGACTTGCAGCACAAATGTCACTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
CDS-3UTR TCA 90 bp CAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTTGTTCAGGTAAGGGCCTaGGAAACACCTGTGGTTGAT +
Preference number: 4 (lower is better)
Translates to: QETLQHGVRFLPWRHSLFVQVRA*ETPVVD
Trigger: ATCAACCACAGGTGTTTCTCAGGCCCTTACCTGAAC...AAACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp AGGGAGACAGAAGTGACATTTGTGCTGCAAGTCCCTGTTCTTTTGTGGCCACCAATATGGAATCGCTCATaGGGATATGGAGATGGCTTC +
Preference number: 4 (lower is better)
Translates to: RETEVTFVLQVPVLLWPPIWNRS*GYGDGF
Trigger: GAAGCCATCTCCATATCCTCATGAGCGATTCCATAT...TGGTGGCCACAAAAGAACAGGGACTTGCAGCACAAATGTCACTTCTGTCTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp GAAAGAGCTGTAAGAATGGCCGAGTCAGAACTGGGACCAGACCCTTCTTATTCTGTTAAACTGTCAGGGTaGAGGATACGGAGAGTCTTG +
Preference number: 4 (lower is better)
Translates to: ERAVRMAESELGPDPSYSVKLSG*RIRRVL
Trigger: CAAGACTCTCCGTATCCTTCACCCTGACAGTTTAAC...AGAATAAGAAGGGTCTGGTCCCAGTTCTGACTCGGCCATTCTTACAGCTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp ACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTAGCGATGGGCTGTCATaGTTCAAGTTGAGGTGGCAT +
Preference number: 4 (lower is better)
Translates to: TGNTTAWREVSSLATFFVSDGLS*FKLRWH
Trigger: ATGCCACCTCAACTTGAATCATGACAGCCCATCGCT...AACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp TTAACTGGCACTCCCCAGAAGCGACTGCTGCTGTGCTTTGAAAACATGGAAACAAGTTTCCTCCAAGCTTaGGCCTTCAGAATCAAGGTC +
Preference number: 4 (lower is better)
Translates to: LTGTPQKRLLLCFENMETSFLQA*AFRIKV
Trigger: GACCTTGATTCTGAAGGCTCAAGCTTGGAGGAAACT...TGTTTCCATGTTTTCAAAGCACAGCAGCAGTCGCTTCTGGGGAGTGCCAGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000673876.1
CDS-3UTR GCA 90 bp GAAAGAGCTGTAAGAATGGCCGAGTCAGAACTGGGACCAGACCCTTCTTATTCTACAAAGTGCTCTCCATaGCTGATGAGCAAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: ERAVRMAESELGPDPSYSTKCSP*LMSKCL
Trigger: GAGACACTTGCTCATCAGGCATGGAGAGCACTTTGT...AGAATAAGAAGGGTCTGGTCCCAGTTCTGACTCGGCCATTCTTACAGCTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp TTTCAAAGGGTTTGGGTTGGTTTATGTTTGAGGGTGGTGGGAGAGGTTCGTGTGACAAAGTGCTCTCCATaGCTGATGAGCAAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: FQRVWVGLCLRVVGEVRVTKCSP*LMSKCL
Trigger: GAGACACTTGCTCATCAGGCATGGAGAGCACTTTGT...CACACGAACCTCTCCCACCACCCTCAAACATAAACCAACCCAAACCCTTTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR GCA 90 bp GATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGAAGAAGTTTTGAGACATCCTTGGAAGCTGACAAAGTaGTCTCCATGCCTGATGAGC +
Preference number: 4 (lower is better)
Translates to: DRGVVSFRDGLEEVLRHPWKLTK*SPCLMS
Trigger: GCTCATCAGGCATGGAGAGCACTTTGTCAGCTTCCA...AGGATGTCTCAAAACTTCTTCGAGACCGTCACGAAATGAAACAACTCCCCGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR GCA 90 bp CTCACAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTGACTGTTTTGTGTGGTaGAGTCAAAGGATAAGAATT +
Preference number: 4 (lower is better)
Translates to: LTGWRRQKILGFWFSGDTDCFVW*SQRIRI
Trigger: AATTCTTATCCTTTGACTGCACCACACAAAACAGTC...AGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp GAAACGACACCCATCTTCAAAAGGCTGATCAAAATCAACCTTCTAGAGAGGGCATCGGCGGCAGAAATTTaGGACTTGGTCAGATGTCCG +
Preference number: 4 (lower is better)
Translates to: ETTPIFKRLIKINLLERASAAEI*DLVRCP
Trigger: CGGACATCTGACCAAGTCGCAAATTTCTGCCGCCGA...TGCCCTCTCTAGAAGGTTGATTTTGATCAGCCTTTTGAAGATGGGTGTCGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp ACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTCATCCAGGGAAGGAATaGGGGGCATCACTTTTTGGT +
Preference number: 4 (lower is better)
Translates to: TGNTTAWREVSSLATFFVHPGKE*GASLFG
Trigger: ACCAAAAAGTGATGCCCCGCATTCCTTCCCTGGATG...AACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp AGCTGTAAGAATGGCCGAGTCAGAACTGGGACCAGACCCTTCTTATTCTTTCTTATCAACAATGACCTCTaGAACAGGAGTCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SCKNGRVRTGTRPFLFFLINNDL*NRSLQP
Trigger: GGGCTGCAGACTCCTGTTCCAGAGGTCATTGTTGAT...AAGAAAGAATAAGAAGGGTCTGGTCCCAGTTCTGACTCGGCCATTCTTACAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp CCTGATTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCAAGTAATAGGTGTATTTaGTTTTGGTATGAATGGAGC +
Preference number: 4 (lower is better)
Translates to: PDLGQEKGKTWVSQEAGPSNRCI*FWYEWS
Trigger: GCTCCATTCATACCAAAACCAAATACACCTATTACT...TGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAATCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp TGTGCTCGTGTGATTACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGGAAACACTACAGCATaGCGTGAGGTTTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: CARVITGNTTAWREVSSLGNTTA*REVSSL
Trigger: CAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCC...CAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCACACGAGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp AAATGCTCCATGAAATTGGCCCTACCTTTAAGACAGACGCTGGTGAGAGGTGAATGGCCGAGTCAGAACTaGGACCAGACCCTTCTTATT +
Preference number: 4 (lower is better)
Translates to: KCSMKLALPLRQTLVRGEWPSQN*DQTLLI
Trigger: AATAAGAAGGGTCTGGTCCCAGTTCTGACTCGGCCA...TTCACCTCTCACCAGCGTCTGTCTTAAAGGTAGGGCCAATTTCATGGAGCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp AGCTGTAAGAATGGCCGAGTCAGAACTGGGACCAGACCCTTCTTATTCTTTCTTTCTGCTTGGGAACTGTaGGAGGGTTTGGTTTCCTTG +
Preference number: 4 (lower is better)
Translates to: SCKNGRVRTGTRPFLFFLSAWEL*EGLVSL
Trigger: CAAGGAAACCAAACCCTCCCACAGTTCCCAAGCAGA...AAGAAAGAATAAGAAGGGTCTGGTCCCAGTTCTGACTCGGCCATTCTTACAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp TCAAATACAACAGGAACAGCTGAGCTTGAAAAGGCCACAGTGAAGGATCATCAAAAGGCCAAAAGCATGTaGCTGAGAAGGCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SNTTGTAELEKATVKDHQKAKSM*LRRQGW
Trigger: CCACCCCTGCCTTCTCAGCCACATGCTTTTGGCCTT...TTGATGATCCTTCACTGTGGCCTTTTCAAGCTCAGCTGTTCCTGTTGTATTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp GAAAGAGCTGTAAGAATGGCCGAGTCAGAACTGGGACCAGACCCTTCTTATTCTCAAGGACCGGAGAGATaGCACAGAGACAACTTTCAT +
Preference number: 4 (lower is better)
Translates to: ERAVRMAESELGPDPSYSQGPER*HRDNFH
Trigger: ATGAAAGTTGTCTCTGTGCCATCTCTCCGGTCCTTG...AGAATAAGAAGGGTCTGGTCCCAGTTCTGACTCGGCCATTCTTACAGCTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp ACATATCCCGGAAAATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATGGTGCAAATCCGCGATaGCTACGTCACACCAGAAGT +
Preference number: 4 (lower is better)
Translates to: TYPGKSKFQSWKPLPTPHGANPR*LRHTRS
Trigger: ACTTCTGGTGTGACGTAGTCATCGCGGATTTGCACC...ATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATTTTCCGGGATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp TGTGCTCGTGTGATTACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGATGTCCGTACGATTTTaGCCACAGCCCTGTATGTTT +
Preference number: 4 (lower is better)
Translates to: CARVITGNTTAWREVSSLMSVRF*PQPCMF
Trigger: AAACATACAGGGCTGTGGTCAAAATCGTACGGACAT...CAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCACACGAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp GTGATTACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCATGTCCGTACGATTTTaGCCACAGCCCTGTATGTTT +
Preference number: 4 (lower is better)
Translates to: VITGNTTAWREVSSLATFMSVRF*PQPCMF
Trigger: AAACATACAGGGCTGTGGTCAAAATCGTACGGACAT...GAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp AGGATGTCGCTGCCAGCTGCATTGCAAAGGAGTTGCCACCAAGATGAAACCGCAACACTCAAAATTCTGTaGGATAAGTTAGGGAAACGA +
Preference number: 4 (lower is better)
Translates to: RMSLPAALQRSCHQDETATLKIL*DKLGKR
Trigger: TCGTTTCCCTAACTTATCTCACAGAATTTTGAGTGT...TGCGGTTTCATCTTGGTGGCAACTCCTTTGCAATGCAGCTGGCAGCGACATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp GAAACGACACCCATCTTCAAAAGGCTGATCAAAATCAACCTTCTAGAGAGGGCATGGAAGCTGACAAAGTaGTCTCCATGCCTGATGAGC +
Preference number: 4 (lower is better)
Translates to: ETTPIFKRLIKINLLERAWKLTK*SPCLMS
Trigger: GCTCATCAGGCATGGAGAGCACTTTGTCAGCTTCCA...TGCCCTCTCTAGAAGGTTGATTTTGATCAGCCTTTTGAAGATGGGTGTCGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp AATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATCCCAGCAATAATGCTGCTTGTGATAATCTaGCCAGTCGAAGTCCTGGCC +
Preference number: 4 (lower is better)
Translates to: NQSFSPGNLYQHRIPAIMLLVII*PVEVLA
Trigger: GGCCAGGACTTCGACTGGGCAGATTATCACAAGCAG...CATTATTGCTGGGATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp CAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTGACTGTTTTGTGTGGTaGAGTCAAAGGATAAGAATT +
Preference number: 4 (lower is better)
Translates to: QAGGGRRSWASGFLVILSDCFVW*SQRIRI
Trigger: AATTCTTATCCTTTGACTGCACCACACAAAACAGTC...ACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp TTAACTGGCACTCCCCAGAAGCGACTGCTGCTGTGCTTTGAAAACATGGAAACACAGCCCTGTATGTTTTaGCTCTGTATTTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: LTGTPQKRLLLCFENMETQPCMF*LCIWPS
Trigger: TGAAGGCCAAATACAGAGGCAAAACATACAGGGCTG...TGTTTCCATGTTTTCAAAGCACAGCAGCAGTCGCTTCTGGGGAGTGCCAGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp AATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATCCCAGCAATAATGTCGGCGGCAGAAATTTaGGACTTGGTCAGATGTCCG +
Preference number: 4 (lower is better)
Translates to: NQSFSPGNLYQHRIPAIMSAAEI*DLVRCP
Trigger: CGGACATCTGACCAAGTCGCAAATTTCTGCCGCCGA...CATTATTGCTGGGATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp AAATGCTCCATGAAATTGGCCCTACCTTTAAGACAGACGCTGGTGAGAGGTGAAGCATTGCAAAGGAGTTaGCACCAAGATGAAACCGCA +
Preference number: 4 (lower is better)
Translates to: KCSMKLALPLRQTLVRGEALQRS*HQDETA
Trigger: TGCGGTTTCATCTTGGTGGCAACTCCTTTGCAATGC...TTCACCTCTCACCAGCGTCTGTCTTAAAGGTAGGGCCAATTTCATGGAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp TTTCAGTCCTGGAAACCTTTACCAACACCGCATCCCAGCAATAATGGGCCACCTCCCAAAGAATCTGCATaGCACAGCATTGACAGTTTA +
Preference number: 4 (lower is better)
Translates to: FQSWKPLPTPHPSNNGPPPKESA*HSIDSL
Trigger: TAAACTGTCAATGCTGTGCCATGCAGATTCTTTGGG...AGGTGGCCCATTATTGCTGGGATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp TTAACTGGCACTCCCCAGAAGCGACTGCTGCTGTGCTTTGAAAACATGGAAACATCAAAGGATAAGAATTaGCTTCACACCAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: LTGTPQKRLLLCFENMETSKDKN*LHTSPL
Trigger: CAGTGGGCTGGTGTGAAGCCAATTCTTATCCTTTGA...TGTTTCCATGTTTTCAAAGCACAGCAGCAGTCGCTTCTGGGGAGTGCCAGTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp CAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTTTTCAGCGTCTCTTCCTaGAAATTCCAGTGGGGATCT +
Preference number: 4 (lower is better)
Translates to: QETLQHGVRFLPWRHSLFFSVSS*KFQWGS
Trigger: AGATCCCCACTGGAATTTCCAGGAAGAGACGCTGAA...AAACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp CTCCCCAGAAGCGACTGCTGCTGTGCTTTGAAAACATGGAAACAGCTCACAGGCAGGTGTATTTGGTTTTaGTATGAATGGAGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: LPRSDCCCALKTWKQLTGRCIWF*YEWSSS
Trigger: AGAACTGCTCCATTCATACCAAAACCAAATACACCT...GCCTGTGAGCTGTTTCCATGTTTTCAAAGCACAGCAGCAGTCGCTTCTGGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp AAGAAGCAGGCCCACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCAGTAATAGGTGTATTTaGTTTTGGTATGAATGGAGC +
Preference number: 4 (lower is better)
Translates to: KKQAHVWQGLMHDFNWHSSNRCI*FWYEWS
Trigger: GCTCCATTCATACCAAAACCAAATACACCTATTACT...GGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTGGGCCTGCTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp ACATATCCCGGAAAATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATGGGAGCTGCCTGATTTaGGGCAGGAGAAAGGCAAAA +
Preference number: 4 (lower is better)
Translates to: TYPGKSKFQSWKPLPTPHGSCLI*GRRKAK
Trigger: TTTTGCCTTTCTCCTGCCCCAAATCAGGCAGCTCCC...ATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATTTTCCGGGATATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp AAATGCTCCATGAAATTGGCCCTACCTTTAAGACAGACGCTGGTGAGAGGTGAAGGAAACACTACAGCATaGCGTGAGGTTTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: KCSMKLALPLRQTLVRGEGNTTA*REVSSL
Trigger: CAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCC...TTCACCTCTCACCAGCGTCTGTCTTAAAGGTAGGGCCAATTTCATGGAGCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp GGAAATGGATGCCCTTTCCAATCGTTTGACAGAGTTGAACTCCACAAGACTGAGTCGCTCATGAGGATATaGAGATGGCTTCTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: GNGCPFQSFDRVELHKTESLMRI*RWLLVQ
Trigger: TTGGACCAGAAGCCATCTCCATATCCTCATGAGCGA...CTCAGTCTTGTGGAGTTCAACTCTGTCAAACGATTGGAAAGGGCATCCATTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
3UTR CAA 72 bp GCACATGTTTTTATAAGGATGTCGCTGCCAGCTGCATaGCAAAGGAGTTGCCACCAAGATGAAACCGCAAGT +
Preference number: 4 (lower is better)
Translates to: AHVFIRMSLPAA*QRSCHQDETAS
Trigger: ACTTGCGGTTTCATCTTGGTGGCAACTCCTTTGCAATGCAGCTGGCAGCGACATCCTTATAAAAACATGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
CDS-3UTR TCA 90 bp GATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGAAGAAGTTTTGAGACATCCTAGTTTCCTCCAAGCTTaGGCCTTCTTCAGAATCAAG +
Preference number: 4 (lower is better)
Translates to: DRGVVSFRDGLEEVLRHPSFLQA*AFFRIK
Trigger: CTTGATTCTGAAGAAGGCTCAAGCTTGGAGGAAACT...AGGATGTCTCAAAACTTCTTCGAGACCGTCACGAAATGAAACAACTCCCCGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR TCA 90 bp ACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTCTAACTATCCAGTACTaGAAAGGGTTCTGGGAATCC +
Preference number: 4 (lower is better)
Translates to: TGNTTAWREVSSLATFFVLTIQY*KGFWES
Trigger: GGATTCCCAGAACCCTTTTCAGTACTGGATAGTTAG...AACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp TGTGCTCGTGTGATTACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGCTGTATTTATTCTCTTaGCACCAACCAACTGGTCGA +
Preference number: 4 (lower is better)
Translates to: CARVITGNTTAWREVSSLLYLFS*HQPTGR
Trigger: TCGACCAGTTGGTTGGTGTCAAGAGAATAAATACAG...CAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCACACGAGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp ACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTGCTTCATCCCAACTGTaGAGAAATGGCTTCGCAAAT +
Preference number: 4 (lower is better)
Translates to: TGNTTAWREVSSLATFFVASSQL*RNGFAN
Trigger: ATTTGCGAAGCCATTTCTTCACAGTTGGGATGAAGC...AACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp AATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATCCCAGCAATAATGCCTGTGGTGTCCAGGTaGGGGAATAAACAAAGGTCA +
Preference number: 4 (lower is better)
Translates to: NQSFSPGNLYQHRIPAIMPVVSR*GNKQRS
Trigger: TGACCTTTGTTTATTCCCTCACCTGGACACCACAGG...CATTATTGCTGGGATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp TGTGCTCGTGTGATTACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGATGGCTTCGCAAATCTaGGTGATCCTTAAACACTTC +
Preference number: 4 (lower is better)
Translates to: CARVITGNTTAWREVSSLMASQI*VILKHF
Trigger: GAAGTGTTTAAGGATCACGCAGATTTGCGAAGCCAT...CAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCACACGAGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp GGAGACAGAAGTGACATTTGTGCTGCAAGTCCCTGTTCTTTTGTGGCCACCACAAATTGTTTCTCTGGTTaGACGACTGCAATCTTTCTC +
Preference number: 4 (lower is better)
Translates to: GDRSDICAASPCSFVATTNCFSG*TTAIFL
Trigger: GAGAAAGATTGCAGTCGTGCAACCAGAGAAACAATT...TGTGGTGGCCACAAAAGAACAGGGACTTGCAGCACAAATGTCACTTCTGTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp AGCTGTAAGAATGGCCGAGTCAGAACTGGGACCAGACCCTTCTTATTCTTTCTTTCCAGGCTTGTAGGCTaGGTTGATTATCATGCTAAG +
Preference number: 4 (lower is better)
Translates to: SCKNGRVRTGTRPFLFFLSRLVG*VDYHAK
Trigger: CTTAGCATGATAATCAACGCAGCCTACAAGCCTGGA...AAGAAAGAATAAGAAGGGTCTGGTCCCAGTTCTGACTCGGCCATTCTTACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp CAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTTTCCAGGCTTGTAGGCTaGGTTGATTATCATGCTAAG +
Preference number: 4 (lower is better)
Translates to: QETLQHGVRFLPWRHSLFSRLVG*VDYHAK
Trigger: CTTAGCATGATAATCAACGCAGCCTACAAGCCTGGA...AAACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp ACATATCCCGGAAAATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATCCCAGAAGCGACTGCTaGTGTGCTTTGAAAACATGG +
Preference number: 4 (lower is better)
Translates to: TYPGKSKFQSWKPLPTPHPRSDC*CALKTW
Trigger: CCATGTTTTCAAAGCACAGCAGCAGTCGCTTCTGGG...ATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATTTTCCGGGATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp GGAAATGGATGCCCTTTCCAATCGTTTGACAGAGTTGAACTCCACAAGACTGAGGAAATGTCACAGAAATaGAAGCAGCTCATCAGCCCA +
Preference number: 4 (lower is better)
Translates to: GNGCPFQSFDRVELHKTEEMSQK*KQLISP
Trigger: TGGGCTGATGAGCTGCTTGCATTTCTGTGACATTTC...CTCAGTCTTGTGGAGTTCAACTCTGTCAAACGATTGGAAAGGGCATCCATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp ACATATCCCGGAAAATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATAGGTCCCCAGGCAGATaGATCAGCCGAACTCTAAAA +
Preference number: 4 (lower is better)
Translates to: TYPGKSKFQSWKPLPTPHRSPGR*ISRTLK
Trigger: TTTTAGAGTTCGGCTGATGCATCTGCCTGGGGACCT...ATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATTTTCCGGGATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp GGAGACAGAAGTGACATTTGTGCTGCAAGTCCCTGTTCTTTTGTGGCCACCACAACACACACAGAAAAATaGTCCATGAAATTGGCCCTA +
Preference number: 4 (lower is better)
Translates to: GDRSDICAASPCSFVATTTHTEK*SMKLAL
Trigger: TAGGGCCAATTTCATGGAGCATTTTTCTGTGTGTGT...TGTGGTGGCCACAAAAGAACAGGGACTTGCAGCACAAATGTCACTTCTGTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp AGGATGTCGCTGCCAGCTGCATTGCAAAGGAGTTGCCACCAAGATGAAACCGCAGCAAATCTCAGAACTTaGCAAATACAACACTCAAAA +
Preference number: 4 (lower is better)
Translates to: RMSLPAALQRSCHQDETAANLRT*QIQHSK
Trigger: TTTTGAGTGTTGTATTTGGCAAGTTCTGAGATTTGC...TGCGGTTTCATCTTGGTGGCAACTCCTTTGCAATGCAGCTGGCAGCGACATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp TTTCAAAGGGTTTGGGTTGGTTTATGTTTGAGGGTGGTGGGAGAGGTTCGTGTGAAGGGTCTTGCATATTaGAAGCTGACAAAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: FQRVWVGLCLRVVGEVRVKGLAY*KLTKCS
Trigger: AGAGCACTTTGTCAGCTTCCAATATGCAAGACCCTT...CACACGAACCTCTCCCACCACCCTCAAACATAAACCAACCCAAACCCTTTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR CCA 90 bp GTGATTACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCCCCAAAGAATCTGCATaGCACAGCATTGACAGTTTA +
Preference number: 4 (lower is better)
Translates to: VITGNTTAWREVSSLATFPKESA*HSIDSL
Trigger: TAAACTGTCAATGCTGTGCCATGCAGATTCTTTGGG...GAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp ACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTAAGGCACCACTGTACTaGCAAAATCCCCAAAGAATC +
Preference number: 4 (lower is better)
Translates to: TGNTTAWREVSSLATFFVKAPLY*QNPQRI
Trigger: GATTCTTTGGGGATTTTGCCAGTACAGTGGTGCCTT...AACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp ACATATCCCGGAAAATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATATCAACAATGACCTCTaGAACAGGAGTCTGCAGCCC +
Preference number: 4 (lower is better)
Translates to: TYPGKSKFQSWKPLPTPHINNDL*NRSLQP
Trigger: GGGCTGCAGACTCCTGTTCCAGAGGTCATTGTTGAT...ATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATTTTCCGGGATATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp CAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTTTCAAAGGATAAGAATTaGCTTCACACCAGCCCACTG +
Preference number: 4 (lower is better)
Translates to: QETLQHGVRFLPWRHSLFSKDKN*LHTSPL
Trigger: CAGTGGGCTGGTGTGAAGCCAATTCTTATCCTTTGA...AAACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp GAAACGACACCCATCTTCAAAAGGCTGATCAAAATCAACCTTCTAGAGAGGGCATCCTGGAAATTCCAGTaGGGATCTTCTACCAGCTGT +
Preference number: 4 (lower is better)
Translates to: ETTPIFKRLIKINLLERASWKFQ*GSSTSC
Trigger: ACAGCTGGTAGAAGATCCCCACTGGAATTTCCAGGA...TGCCCTCTCTAGAAGGTTGATTTTGATCAGCCTTTTGAAGATGGGTGTCGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp TGGCATAAGACAGAAGGCAAATCTCAGAACTTGCCAAATACAACACTCAAAATTGACAGCACTCTAGCTTaGCACAGACTCGGCGGCAGA +
Preference number: 4 (lower is better)
Translates to: WHKTEGKSQNLPNTTLKIDSTLA*HRLGGR
Trigger: TCTGCCGCCGAGTCTGTGCCAAGCTAGAGTGCTGTC...AATTTTGAGTGTTGTATTTGGCAAGTTCTGAGATTTGCCTTCTGTCTTATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp TTTCAGTCCTGGAAACCTTTACCAACACCGCATCCCAGCAATAATGGGCCACCTAACTGTGGGAGGGTTTaGTTTCCTTGCATAAGTTTA +
Preference number: 4 (lower is better)
Translates to: FQSWKPLPTPHPSNNGPPNCGRV*FPCISL
Trigger: TAAACTTATGCAAGGAAACCAAACCCTCCCACAGTT...AGGTGGCCCATTATTGCTGGGATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp ACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTTGCACCAACGAGATATaGGCAGTATGGATATCTTGC +
Preference number: 4 (lower is better)
Translates to: TGNTTAWREVSSLATFFVCTNEI*AVWISC
Trigger: GCAAGATATCCATACTGCCCATATCTCGTTGGTGCA...AACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
3UTR CAA 72 bp GTGTCTGACTCCAACTTGGATCAAATGACTCTAATTTaGAAAGTGATGGATGAGTTCCCCACGCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: VSDSNLDQMTLI*KVMDEFPTLCS
Trigger: GCTGCACAGCGTGGGGAACTCATCCATCACTTTCAAAATTAGAGTCATTTGATCCAAGTTGGAGTCAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
CDS-3UTR TCA 90 bp AATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATCCCAGCAATAATGGGCTGGAAGTTGCTCTaGATGCTGATTTCAACGTGT +
Preference number: 4 (lower is better)
Translates to: NQSFSPGNLYQHRIPAIMGWKLL*MLISTC
Trigger: ACACGTTGAAATCAGCATTCAGAGCAACTTCCAGCC...CATTATTGCTGGGATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp TTAACTGGCACTCCCCAGAAGCGACTGCTGCTGTGCTTTGAAAACATGGAAACAATAAATGTGCTCGTGTaGTTACAGGAAACACTACAG +
Preference number: 4 (lower is better)
Translates to: LTGTPQKRLLLCFENMETINVLV*LQETLQ
Trigger: CTGTAGTGTTTCCTGTAATCACACGAGCACATTTAT...TGTTTCCATGTTTTCAAAGCACAGCAGCAGTCGCTTCTGGGGAGTGCCAGTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp TGGCATAAGACAGAAGGCAAATCTCAGAACTTGCCAAATACAACACTCAAAATTGGCGGGCAGATCACTTaGGGTTGGGAGTTCAAGACT +
Preference number: 4 (lower is better)
Translates to: WHKTEGKSQNLPNTTLKIGGQIT*GWEFKT
Trigger: AGTCTTGAACTCCCAACCTCAAGTGATCTGCCCGCC...AATTTTGAGTGTTGTATTTGGCAAGTTCTGAGATTTGCCTTCTGTCTTATGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp GAAACGACACCCATCTTCAAAAGGCTGATCAAAATCAACCTTCTAGAGAGGGCACAGCCCTGTATGTTTTaGCTCTGTATTTGGCCTTCA +
Preference number: 4 (lower is better)
Translates to: ETTPIFKRLIKINLLERAQPCMF*LCIWPS
Trigger: TGAAGGCCAAATACAGAGGCAAAACATACAGGGCTG...TGCCCTCTCTAGAAGGTTGATTTTGATCAGCCTTTTGAAGATGGGTGTCGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp GGAAATGGATGCCCTTTCCAATCGTTTGACAGAGTTGAACTCCACAAGACTGAGAGATCTGGAAATGGATaGCCTTTCCAATCGTTTGAC +
Preference number: 4 (lower is better)
Translates to: GNGCPFQSFDRVELHKTERSGNG*PFQSFD
Trigger: GTCAAACGATTGGAAAGGGCATCCATTTCCAGATCT...CTCAGTCTTGTGGAGTTCAACTCTGTCAAACGATTGGAAAGGGCATCCATTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp TGTGCTCGTGTGATTACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGTTCCAATTTCATTCCTaGCTGGAAGTTGCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: CARVITGNTTAWREVSSLFQFHS*LEVALN
Trigger: ATTCAGAGCAACTTCCAGCCAGGAATGAAATTGGAA...CAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCACACGAGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp ACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTCAGAAATTTGCGACTTaGTCAGATGTCCGTACGATT +
Preference number: 4 (lower is better)
Translates to: TGNTTAWREVSSLATFFVQKFAT*SDVRTI
Trigger: AATCGTACGGACATCTGACCAAGTCGCAAATTTCTG...AACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp AATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATCCCAGCAATAATGTCTTCTGCACGAAAATaGATTTCCGTCGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: NQSFSPGNLYQHRIPAIMSSARK*ISVASS
Trigger: GGAGGAAGCGACGGAAATCCATTTTCGTGCAGAAGA...CATTATTGCTGGGATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp ACATATCCCGGAAAATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATTCTTCTGCACGAAAATaGATTTCCGTCGCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TYPGKSKFQSWKPLPTPHSSARK*ISVASS
Trigger: GGAGGAAGCGACGGAAATCCATTTTCGTGCAGAAGA...ATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATTTTCCGGGATATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp AATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATCCCAGCAATAATGATGCATGACTTTAACTaGCACTCCCCAGAAGCGACT +
Preference number: 4 (lower is better)
Translates to: NQSFSPGNLYQHRIPAIMMHDFN*HSPEAT
Trigger: AGTCGCTTCTGGGGAGTGCCAGTTAAAGTCATGCAT...CATTATTGCTGGGATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp TTTCAAAGGGTTTGGGTTGGTTTATGTTTGAGGGTGGTGGGAGAGGTTCGTGTGGCTTTTCAAAGGGTTTaGGTTGGTTTATGTTTGAGG +
Preference number: 4 (lower is better)
Translates to: FQRVWVGLCLRVVGEVRVAFQRV*VGLCLR
Trigger: CCTCAAACATAAACCAACCCAAACCCTTTGAAAAGC...CACACGAACCTCTCCCACCACCCTCAAACATAAACCAACCCAAACCCTTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379711.2
3UTR CAA 72 bp ACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTaGGCGACATTCTTTGTTTTCAAAGAATGCAGTCCT +
Preference number: 4 (lower is better)
Translates to: TGNTTAWREVSS*ATFFVFKECSP
Trigger: AGGACTGCATTCTTTGAAAACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361972.8
ENST00000397167.5
ENST00000673876.1
CDS-3UTR TCA 90 bp AATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATCCCAGCAATAATGTCCATTTCCATTAGCTaGGCCGAGACACTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: NQSFSPGNLYQHRIPAIMSISIS*AETLFQ
Trigger: TTGGAAAAGTGTCTCGGCTCAGCTAATGGAAATGGA...CATTATTGCTGGGATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp TCAAATACAACAGGAACAGCTGAGCTTGAAAAGGCCACAGTGAAGGATCATCAACAGTCAAGTCACGTATaGGAAATTCTGTCCAGTCTG +
Preference number: 4 (lower is better)
Translates to: SNTTGTAELEKATVKDHQQSSHV*EILSSL
Trigger: CAGACTGGACAGAATTTCTCATACGTGACTTGACTG...TTGATGATCCTTCACTGTGGCCTTTTCAAGCTCAGCTGTTCCTGTTGTATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp TCAAATACAACAGGAACAGCTGAGCTTGAAAAGGCCACAGTGAAGGATCATCAACTAACTATCCAGTACTaGAAAGGGTTCTGGGAATCC +
Preference number: 4 (lower is better)
Translates to: SNTTGTAELEKATVKDHQLTIQY*KGFWES
Trigger: GGATTCCCAGAACCCTTTTCAGTACTGGATAGTTAG...TTGATGATCCTTCACTGTGGCCTTTTCAAGCTCAGCTGTTCCTGTTGTATTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp AATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATCCCAGCAATAATGATTCCACATCAACAATaGCCTCTGGAACAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: NQSFSPGNLYQHRIPAIMIPHQQ*PLEQES
Trigger: AGACTCCTGTTCCAGAGGTCATTGTTGATGTGGAAT...CATTATTGCTGGGATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR TCA 90 bp AGCTGTAAGAATGGCCGAGTCAGAACTGGGACCAGACCCTTCTTATTCTTTCTTAAGAGTTCAACCATGTaGAAGGGAGTAATTTCCAGA +
Preference number: 4 (lower is better)
Translates to: SCKNGRVRTGTRPFLFFLKSSTM*KGVISR
Trigger: TCTGGAAATTACTCCCTTTCACATGGTTGAACTCTT...AAGAAAGAATAAGAAGGGTCTGGTCCCAGTTCTGACTCGGCCATTCTTACAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp GGAAATGGATGCCCTTTCCAATCGTTTGACAGAGTTGAACTCCACAAGACTGAGCTAGTGATAGAGCTATaGGAACTGGTCAACTTAAGA +
Preference number: 4 (lower is better)
Translates to: GNGCPFQSFDRVELHKTELVIEL*ELVNLR
Trigger: TCTTAAGTTGACCAGTTCTCATAGCTCTATCACTAG...CTCAGTCTTGTGGAGTTCAACTCTGTCAAACGATTGGAAAGGGCATCCATTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp CAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTTGAAGATGAAGGGTCTTaGATATTGGAAGCTGACAAA +
Preference number: 4 (lower is better)
Translates to: QETLQHGVRFLPWRHSLFEDEGS*ILEADK
Trigger: TTTGTCAGCTTCCAATATGCAAGACCCTTCATCTTC...AAACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR GCA 90 bp AGCTGTAAGAATGGCCGAGTCAGAACTGGGACCAGACCCTTCTTATTCTTTCTTTGCCTTTCAAATAATTaGACGCACGATCACAGCTTT +
Preference number: 4 (lower is better)
Translates to: SCKNGRVRTGTRPFLFFLCLSNN*THDHSF
Trigger: AAAGCTGTGATCGTGCGTGCAATTATTTGAAAGGCA...AAGAAAGAATAAGAAGGGTCTGGTCCCAGTTCTGACTCGGCCATTCTTACAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp GATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGAAGAAGTTTTGAGACATCCTTTCCAATTTCATTCCTaGCTGGAAGTTGCTCTGAAT +
Preference number: 4 (lower is better)
Translates to: DRGVVSFRDGLEEVLRHPFQFHS*LEVALN
Trigger: ATTCAGAGCAACTTCCAGCCAGGAATGAAATTGGAA...AGGATGTCTCAAAACTTCTTCGAGACCGTCACGAAATGAAACAACTCCCCGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR CCA 90 bp GGAAATGGATGCCCTTTCCAATCGTTTGACAGAGTTGAACTCCACAAGACTGAGCTTAAACACTTCCATTaGAAGAGGAAATTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GNGCPFQSFDRVELHKTELKHFH*KRKFGS
Trigger: GCTGCCAAATTTCCTCTTCCAATGGAAGTGTTTAAG...CTCAGTCTTGTGGAGTTCAACTCTGTCAAACGATTGGAAAGGGCATCCATTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp ACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTCTTAAACACTTCCATTaGAAGAGGAAATTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: TGNTTAWREVSSLATFFVLKHFH*KRKFGS
Trigger: GCTGCCAAATTTCCTCTTCCAATGGAAGTGTTTAAG...AACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp TGGCATAAGACAGAAGGCAAATCTCAGAACTTGCCAAATACAACACTCAAAATTAACCATCTAGTTGCATaGAGATGCCTGCCGGCCTTC +
Preference number: 4 (lower is better)
Translates to: WHKTEGKSQNLPNTTLKINHLVA*RCLPAF
Trigger: GAAGGCCGGCAGGCATCTCCATGCAACTAGATGGTT...AATTTTGAGTGTTGTATTTGGCAAGTTCTGAGATTTGCCTTCTGTCTTATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp TGGCATAAGACAGAAGGCAAATCTCAGAACTTGCCAAATACAACACTCAAAATTGGCTCAGAAGGACACTaGCAACAGCTGGAGGAAAAG +
Preference number: 4 (lower is better)
Translates to: WHKTEGKSQNLPNTTLKIGSEGH*QQLEEK
Trigger: CTTTTCCTCCAGCTGTTGCCAGTGTCCTTCTGAGCC...AATTTTGAGTGTTGTATTTGGCAAGTTCTGAGATTTGCCTTCTGTCTTATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp GGAAATGGATGCCCTTTCCAATCGTTTGACAGAGTTGAACTCCACAAGACTGAGCAAATCCACTTTTTCTaGCAAAAGCAACAAGGACAC +
Preference number: 4 (lower is better)
Translates to: GNGCPFQSFDRVELHKTEQIHFF*QKQQGH
Trigger: GTGTCCTTGTTGCTTTTGCCAGAAAAAGTGGATTTG...CTCAGTCTTGTGGAGTTCAACTCTGTCAAACGATTGGAAAGGGCATCCATTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp GAAACGACACCCATCTTCAAAAGGCTGATCAAAATCAACCTTCTAGAGAGGGCACGGGGCATCACTTTTTaGTGTTTAGACCATGACATT +
Preference number: 4 (lower is better)
Translates to: ETTPIFKRLIKINLLERARGITF*CLDHDI
Trigger: AATGTCATGGTCTAAACACCAAAAAGTGATGCCCCG...TGCCCTCTCTAGAAGGTTGATTTTGATCAGCCTTTTGAAGATGGGTGTCGTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp GGAAATGGATGCCCTTTCCAATCGTTTGACAGAGTTGAACTCCACAAGACTGAGCTAAGGAGAGGACTTTaGTCCCAAAGAATCATCAAA +
Preference number: 4 (lower is better)
Translates to: GNGCPFQSFDRVELHKTELRRGL*SQRIIK
Trigger: TTTGATGATTCTTTGGGACCAAAGTCCTCTCCTTAG...CTCAGTCTTGTGGAGTTCAACTCTGTCAAACGATTGGAAAGGGCATCCATTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp AATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATCCCAGCAATAATGCTGTATTTATTCTCTTaGCACCAACCAACTGGTCGA +
Preference number: 4 (lower is better)
Translates to: NQSFSPGNLYQHRIPAIMLYLFS*HQPTGR
Trigger: TCGACCAGTTGGTTGGTGTCAAGAGAATAAATACAG...CATTATTGCTGGGATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp ACATATCCCGGAAAATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATTTGACACCAACCAACTaGTCGAAGTCTGTAATCCAA +
Preference number: 4 (lower is better)
Translates to: TYPGKSKFQSWKPLPTPHLTPTN*SKSVIQ
Trigger: TTGGATTACAGACTTCGACCAGTTGGTTGGTGTCAA...ATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATTTTCCGGGATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CCA 90 bp GGAAATGGATGCCCTTTCCAATCGTTTGACAGAGTTGAACTCCACAAGACTGAGTCACACGCCTATCCATaGGAAACTGCATATATAAAT +
Preference number: 4 (lower is better)
Translates to: GNGCPFQSFDRVELHKTESHAYP*ETAYIN
Trigger: ATTTATATATGCAGTTTCCCATGGATAGGCGTGTGA...CTCAGTCTTGTGGAGTTCAACTCTGTCAAACGATTGGAAAGGGCATCCATTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp CAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTTGAGATATGGGCAGTATaGATATCTTGCCAACAATTT +
Preference number: 4 (lower is better)
Translates to: QETLQHGVRFLPWRHSLFEIWAV*ISCQQF
Trigger: AAATTGTTGGCAAGATATCCATACTGCCCATATCTC...AAACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CCA 90 bp TCAAATACAACAGGAACAGCTGAGCTTGAAAAGGCCACAGTGAAGGATCATCAAGACCGTCATACTTACTaGGCCAAATCCCATTACTTA +
Preference number: 4 (lower is better)
Translates to: SNTTGTAELEKATVKDHQDRHTY*AKSHYL
Trigger: TAAGTAATGGGATTTGGCCCAGTAAGTATGACGGTC...TTGATGATCCTTCACTGTGGCCTTTTCAAGCTCAGCTGTTCCTGTTGTATTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp TGGCATAAGACAGAAGGCAAATCTCAGAACTTGCCAAATACAACACTCAAAATTGGCTGGAAGTTGCTCTaGATGCTGATTTCAACGTGT +
Preference number: 4 (lower is better)
Translates to: WHKTEGKSQNLPNTTLKIGWKLL*MLISTC
Trigger: ACACGTTGAAATCAGCATTCAGAGCAACTTCCAGCC...AATTTTGAGTGTTGTATTTGGCAAGTTCTGAGATTTGCCTTCTGTCTTATGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp TGGCATAAGACAGAAGGCAAATCTCAGAACTTGCCAAATACAACACTCAAAATTCTTCTGGTTTTCTGGTaGTACTTAGTGGCTGTACCA +
Preference number: 4 (lower is better)
Translates to: WHKTEGKSQNLPNTTLKILLVFW*YLVAVP
Trigger: TGGTACAGCCACTAAGTATCACCAGAAAACCAGAAG...AATTTTGAGTGTTGTATTTGGCAAGTTCTGAGATTTGCCTTCTGTCTTATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR TCA 90 bp TGGCATAAGACAGAAGGCAAATCTCAGAACTTGCCAAATACAACACTCAAAATTCAAGAAGTGAGGAGCTaGAACAAGCTCCATGAGTTT +
Preference number: 4 (lower is better)
Translates to: WHKTEGKSQNLPNTTLKIQEVRS*NKLHEF
Trigger: AAACTCATGGAGCTTGTTTCAGCTCCTCACTTCTTG...AATTTTGAGTGTTGTATTTGGCAAGTTCTGAGATTTGCCTTCTGTCTTATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp TGGCATAAGACAGAAGGCAAATCTCAGAACTTGCCAAATACAACACTCAAAATTGACCTCCGTTTCTTCTaGACGAAAATGGATTTCCGT +
Preference number: 4 (lower is better)
Translates to: WHKTEGKSQNLPNTTLKIDLRFF*TKMDFR
Trigger: ACGGAAATCCATTTTCGTGCAGAAGAAACGGAGGTC...AATTTTGAGTGTTGTATTTGGCAAGTTCTGAGATTTGCCTTCTGTCTTATGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
3UTR CAA 72 bp AAGCCGTGCAGCTCAAATACTGTGTCTGACTCCAACTaGGATCAAATGACTCTAATTTTGAAAGTGATGGAT +
Preference number: 4 (lower is better)
Translates to: KPCSSNTVSDSN*DQMTLILKVMD
Trigger: ATCCATCACTTTCAAAATTAGAGTCATTTGATCCAAGTTGGAGTCAGACACAGTATTTGAGCTGCACGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
CDS-3UTR GCA 90 bp ACATATCCCGGAAAATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATTTTGTTTTCAAAGAATaGAGTCCTCATCTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: TYPGKSKFQSWKPLPTPHFVFKE*SPHLRK
Trigger: TTTCCTCAGATGAGGACTGCATTCTTTGAAAACAAA...ATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATTTTCCGGGATATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
3UTR CAA 72 bp TTATTGCACCAACGAGATATGGGCAGTATGGATATCTaGCCAACAATTTCTTCCTTAACAACTACAGGTTTC +
Preference number: 4 (lower is better)
Translates to: LLHQRDMGSMDI*PTISSLTTTGF
Trigger: GAAACCTGTAGTTGTTAAGGAAGAAATTGTTGGCAAGATATCCATACTGCCCATATCTCGTTGGTGCAATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
3UTR CAA 72 bp TCTGTAATGCCAGTAGTACCCTGTTGTTTTTCTAGGTaGTTAGGCTTATGTCTTTGTGGACAGGATATTTTT +
Preference number: 4 (lower is better)
Translates to: SVMPVVPCCFSR*LGLCLCGQDIF
Trigger: AAAAATATCCTGTCCACAAAGACATAAGCCTAACAACCTAGAAAAACAACAGGGTACTACTGGCATTACAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000397167.5
CDS-3UTR GCA 90 bp TGGCATAAGACAGAAGGCAAATCTCAGAACTTGCCAAATACAACACTCAAAATTCTATCCATGGGAAACTaGATATATAAATGTGCTCGT +
Preference number: 4 (lower is better)
Translates to: WHKTEGKSQNLPNTTLKILSMGN*IYKCAR
Trigger: ACGAGCACATTTATATATGCAGTTTCCCATGGATAG...AATTTTGAGTGTTGTATTTGGCAAGTTCTGAGATTTGCCTTCTGTCTTATGCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR GCA 90 bp TGGCATAAGACAGAAGGCAAATCTCAGAACTTGCCAAATACAACACTCAAAATTTTGCTATTTAATTATTaGACCAACGAGATATGGGCA +
Preference number: 4 (lower is better)
Translates to: WHKTEGKSQNLPNTTLKILLFNY*TNEIWA
Trigger: TGCCCATATCTCGTTGGTGCAATAATTAAATAGCAA...AATTTTGAGTGTTGTATTTGGCAAGTTCTGAGATTTGCCTTCTGTCTTATGCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS CCA 90 bp CTCCGGGGCCGGGCCGAGGGCACCTCCGCCGACGAGGTGTCCGTCTaGTCATCCCGGAGCTCGGAGCCGGTCTCCTCACTGGCGGTGTCA +
Preference number: 5 (lower is better)
Translates to: LRGRAEGTSADEVSV*SSRSSEPVSSLAVS
Trigger: TGACACCGCCAGTGAGGAGACCGGCTCCGAGCTCCGGGATGACCAGACGGACACCTCGTCGGCGGAGGTGCCCTCGGCCCGGCCCCGGAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS CCA 90 bp CCCGGAGCTCGGAGCCGGTCTCCTCACTGGCGGTGTCATCGTCCATaGCGTCAGCGTCCTCCTCTTCACTTTCCTCCCCCGAGCCCGCGG +
Preference number: 5 (lower is better)
Translates to: PGARSRSPHWRCHRP*RQRPPLHFPPPSPR
Trigger: CCGCGGGCTCGGGGGAGGAAAGTGAAGAGGAGGACGCTGACGCCATGGACGATGACACCGCCAGTGAGGAGACCGGCTCCGAGCTCCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS-3UTR CAA 90 bp CGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCACGTGCACAGACAGTCTGTCCCCTCGGGCTaGGTCGGCGGGCACTTCTCC +
Preference number: 5 (lower is better)
Translates to: RPPVQWSQPSPPWHVHRQSVPSG*VGGHFS
Trigger: GGAGAAGTGCCCGCCGACCAAGCCCGAGGGGACAGA...CTGTCTGTGCACGTGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp CTCACAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTCTCCGCCTGGCGGGTTaGGGGTGTCCGCTGTCGGGG +
Preference number: 5 (lower is better)
Translates to: LTGWRRQKILGFWFSGDTLRLAG*GCPLSG
Trigger: CCCCGACAGCGGACACCCCAAACCCGCCAGGCGGAG...AGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS CCA 90 bp AGGTGTCCGTCTGGTCATCCCGGAGCTCGGAGCCGGTCTCCTCACTaGCGGTGTCATCGTCCATGGCGTCAGCGTCCTCCTCTTCACTTT +
Preference number: 5 (lower is better)
Translates to: RCPSGHPGARSRSPH*RCHRPWRQRPPLHF
Trigger: AAAGTGAAGAGGAGGACGCTGACGCCATGGACGATGACACCGCCAGTGAGGAGACCGGCTCCGAGCTCCGGGATGACCAGACGGACACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS CCA 90 bp CCGCACACCCCTCCGCAAGGACAACTGGGCAAACTCCCGTTTCCCTaGCTGCGGTTCGTGAGCTGGGTTTCCAATGGCTCAGTCGACCGT +
Preference number: 5 (lower is better)
Translates to: PHTPPQGQLGKLPFP*LRFVSWVSNGSVDR
Trigger: ACGGTCGACTGAGCCATTGGAAACCCAGCTCACGAACCGCAGCCAGGGAAACGGGAGTTTGCCCAGTTGTCCTTGCGGAGGGGTGTGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379713.8
ENST00000682180.1
CDS GCA 90 bp CCCGAGCCCGCGGTGAAGTCCACGGCAGAAGACCTCCGTTTCTTCTaGACGAAAATGGATTTCCGTCGCTTCCTCCGCCTGGCGGGTTTG +
Preference number: 5 (lower is better)
Translates to: PEPAVKSTAEDLRFF*TKMDFRRFLRLAGL
Trigger: CAAACCCGCCAGGCGGAGGAAGCGACGGAAATCCATTTTCGTGCAGAAGAAACGGAGGTCTTCTGCCGTGGACTTCACCGCGGGCTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS-3UTR CAA 90 bp CGACGCCAGGCTGCGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCAGATGTCCGTACGATTTaGACCACAGCCCTGTATGTT +
Preference number: 5 (lower is better)
Translates to: RRQAAPSCAVVPAISSLADVRTI*TTALYV
Trigger: AACATACAGGGCTGTGGTCAAAATCGTACGGACATC...TGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCGCAGCCTGGCGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp CTCCCCAGAAGCGACTGCTGCTGTGCTTTGAAAACATGGAAACAGCTCACAGGCTCTGTCCCCTCGGGCTaGGTCGGCGGGCACTTCTCC +
Preference number: 5 (lower is better)
Translates to: LPRSDCCCALKTWKQLTGSVPSG*VGGHFS
Trigger: GGAGAAGTGCCCGCCGACCAAGCCCGAGGGGACAGA...GCCTGTGAGCTGTTTCCATGTTTTCAAAGCACAGCAGCAGTCGCTTCTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp CACTGCTCTGCGTTGGTTAGGCGACACGACCGTCATACTTACTGGGCCAAATCCCTCGCAGCCACAGCTTaGTCTGCACGTGACCTGGCG +
Preference number: 5 (lower is better)
Translates to: HCSALVRRHDRHTYWAKSLAATA*SARDLA
Trigger: CGCCAGGTCACGTGCAGACAAAGCTGTGGCTGCGAG...GGATTTGGCCCAGTAAGTATGACGGTCGTGTCGCCTAACCAACGCAGAGCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp CGACGCCAGGCTGCGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCAGAGGGTTTGGTTTCCTaGCATAAGTTTAAGAAGGCA +
Preference number: 5 (lower is better)
Translates to: RRQAAPSCAVVPAISSLAEGLVS*HKFKKA
Trigger: TGCCTTCTTAAACTTATGCAAGGAAACCAAACCCTC...TGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCGCAGCCTGGCGTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp AAACCTTTACCAACACCGCATCCCAGCAATAATGGGCCACCTCCCGAGGGCAGAAGGATACGGAGAGTCTaGGGCGCTTGGCTCCACGGG +
Preference number: 5 (lower is better)
Translates to: KPLPTPHPSNNGPPPEGRRIRRV*GAWLHG
Trigger: CCCGTGGAGCCAAGCGCCCAAGACTCTCCGTATCCT...TCTGCCCTCGGGAGGTGGCCCATTATTGCTGGGATGCGGTGTTGGTAAAGGTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS TCA 90 bp CGCAAGGACAACTGGGCAAACTCCCGTTTCCCTGGCTGCGGTTCGTaGGCTGGGTTTCCAATGGCTCAGTCGACCGTGTGCACAAACTTG +
Preference number: 5 (lower is better)
Translates to: RKDNWANSRFPGCGS*AGFPMAQSTVCTNL
Trigger: CAAGTTTGTGCACACGGTCGACTGAGCCATTGGAAACCCAGCTCACGAACCGCAGCCAGGGAAACGGGAGTTTGCCCAGTTGTCCTTGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379713.8
ENST00000682180.1
CDS CCA 90 bp GGACAACTGGGCAAACTCCCGTTTCCCTGGCTGCGGTTCGTGAGCTaGGTTTCCAATGGCTCAGTCGACCGTGTGCACAAACTTGCGCTT +
Preference number: 5 (lower is better)
Translates to: GQLGKLPFPWLRFVS*VSNGSVDRVHKLAL
Trigger: AAGCGCAAGTTTGTGCACACGGTCGACTGAGCCATTGGAAACCCAGCTCACGAACCGCAGCCAGGGAAACGGGAGTTTGCCCAGTTGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379713.8
ENST00000682180.1
CDS CCA 90 bp CTCAAGCACAGGCAGCACGTGCTAGAGCTGGTGTACACAGACGAGTaGGTTCACACCATGCAGCTTACTGTCGTCCGGCGGCATCAACAC +
Preference number: 5 (lower is better)
Translates to: LKHRQHVLELVYTDE*VHTMQLTVVRRHQH
Trigger: GTGTTGATGCCGCCGGACGACAGTAAGCTGCATGGTGTGAACCCACTCGTCTGTGTACACCAGCTCTAGCACGTGCTGCCTGTGCTTGAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682101.1
CDS-3UTR CAA 90 bp AAGCACCTCCTGGGTCCTAAAATCTTTCTGGGCTCTCCTCAAGGACCGGAGAGAGGACAGCACTCTAGCTaGGCACAGACTCGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: KHLLGPKIFLGSPQGPERGQHSS*AQTRRQ
Trigger: CTGCCGCCGAGTCTGTGCCAAGCTAGAGTGCTGTCC...TCTCTCCGGTCCTTGAGGAGAGCCCAGAAAGATTTTAGGACCCAGGAGGTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp CAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTTCTCCGCCTGGCGGGTTaGGGGTGTCCGCTGTCGGGG +
Preference number: 5 (lower is better)
Translates to: QETLQHGVRFLPWRHSLFLRLAG*GCPLSG
Trigger: CCCCGACAGCGGACACCCCAAACCCGCCAGGCGGAG...AAACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp CACGTGCACAGACAGTGCTCACCCATGGTGACCGCAACTGCACAGAGAAACGCTAAGCACTGCTCTGCGTaGGTTAGGCGACACGACCGT +
Preference number: 5 (lower is better)
Translates to: HVHRQCSPMVTATAQRNAKHCSA*VRRHDR
Trigger: ACGGTCGTGTCGCCTAACCAACGCAGAGCAGTGCTT...AGCGTTTCTCTGTGCAGTTGCGGTCACCATGGGTGAGCACTGTCTGTGCACGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp CCTGATTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCAGGCATCAACACCTTGTaGTTCTGTGTGCACCACCCC +
Preference number: 5 (lower is better)
Translates to: PDLGQEKGKTWVSQEAGPGINTL*FCVHHP
Trigger: GGGGTGGTGCACACAGAACAACAAGGTGTTGATGCC...TGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAATCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp GGTGGGAGAGGTTCGTGTGGGATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGGGCGGCATCAACACCTaGTTGTTCTGTGTGCACCAC +
Preference number: 5 (lower is better)
Translates to: GGRGSCGIGELFHFVTVSGGINT*LFCVHH
Trigger: GTGGTGCACACAGAACAACAAGGTGTTGATGCCGCC...CGAGACCGTCACGAAATGAAACAACTCCCCGATCCCACACGAACCTCTCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR CAA 90 bp GCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTGGCGTCCACTCCAACGGGTaGCTCTCCAGAACCAGTCTC +
Preference number: 5 (lower is better)
Translates to: AGGGRRSWASGFLVILSGVHSNG*LSRTSL
Trigger: GAGACTGGTTCTGGAGAGCAACCCGTTGGAGTGGAC...GCCACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp CACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCCCAGAAGCGACTGTCCACTCCAACGGGTaGCTCTCCAGAACCAGTCTC +
Preference number: 5 (lower is better)
Translates to: HVWQGLMHDFNWHSPEATVHSNG*LSRTSL
Trigger: GAGACTGGTTCTGGAGAGCAACCCGTTGGAGTGGAC...AGTCGCTTCTGGGGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp CGCCCTCCTGTGCAGTGGTCCCAGCCATCTCCTCCCTGGCACGTGCACAGACAGAAATGCTCCATGAAATaGGCCCTACCTTTAAGACAG +
Preference number: 5 (lower is better)
Translates to: RPPVQWSQPSPPWHVHRQKCSMK*ALPLRQ
Trigger: CTGTCTTAAAGGTAGGGCCAATTTCATGGAGCATTT...CTGTCTGTGCACGTGCCAGGGAGGAGATGGCTGGGACCACTGCACAGGAGGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp TTTCAGTCCTGGAAACCTTTACCAACACCGCATCCCAGCAATAATGGGCCACCTGGACCTTCCAGGAGGTaGGCGGGTGCTGTCCTCGAA +
Preference number: 5 (lower is better)
Translates to: FQSWKPLPTPHPSNNGPPGPSRR*AGAVLE
Trigger: TTCGAGGACAGCACCCGCCAACCTCCTGGAAGGTCC...AGGTGGCCCATTATTGCTGGGATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp AAACCTTTACCAACACCGCATCCCAGCAATAATGGGCCACCTCCCGAGGGCAGACAGAAGCAGGAGTGCTaGGCCGTCAATATCCTGCTC +
Preference number: 5 (lower is better)
Translates to: KPLPTPHPSNNGPPPEGRQKQEC*AVNILL
Trigger: GAGCAGGATATTGACGGCCAAGCACTCCTGCTTCTG...TCTGCCCTCGGGAGGTGGCCCATTATTGCTGGGATGCGGTGTTGGTAAAGGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp CACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCCCAGAAGCGACTAGGCAGGAGAATCACTaGAACCCGGGAGAGAGAGGT +
Preference number: 5 (lower is better)
Translates to: HVWQGLMHDFNWHSPEATRQENH*NPGERG
Trigger: ACCTCTCTCTCCCGGGTTCAAGTGATTCTCCTGCCT...AGTCGCTTCTGGGGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp GAGAGTCTTGGGCGCTTGGCTCCACGGGAAGCAAACACTTTCCCCTGCGACAGTCCAAGATCTCAGAGTTaGTTCTCAGCGAAACCAGGG +
Preference number: 5 (lower is better)
Translates to: ESLGRLAPREANTFPCDSPRSQS*FSAKPG
Trigger: CCCTGGTTTCGCTGAGAACAAACTCTGAGATCTTGG...ACTGTCGCAGGGGAAAGTGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp GCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTGGCGCTTCCAGTGTCTGCTaGGGAACTGTGGGAGGGTTT +
Preference number: 5 (lower is better)
Translates to: AGGGRRSWASGFLVILSGASSVC*GTVGGF
Trigger: AAACCCTCCCACAGTTCCCAAGCAGACACTGGAAGC...GCCACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp TCCACCACGACGGAAATCCCCGGAGAATCCAGGCTCAGAAGGACACTGGCAACACAGTACGTGTCCGGGTaGTTCTTATTAGCCACTTCC +
Preference number: 5 (lower is better)
Translates to: STTTEIPGESRLRRTLATQYVSG*FLLATS
Trigger: GGAAGTGGCTAATAAGAACAACCCGGACACGTACTG...TGTTGCCAGTGTCCTTCTGAGCCTGGATTCTCCGGGGATTTCCGTCGTGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp AGGATGTCGCTGCCAGCTGCATTGCAAAGGAGTTGCCACCAAGATGAAACCGCACACTGTGGGCGGCAATaGTTTCTCTGGTTGCACGAC +
Preference number: 5 (lower is better)
Translates to: RMSLPAALQRSCHQDETAHCGRQ*FLWLHD
Trigger: GTCGTGCAACCAGAGAAACAATTGCCGCCCACAGTG...TGCGGTTTCATCTTGGTGGCAACTCCTTTGCAATGCAGCTGGCAGCGACATCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp TCACAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTCACTGTGGGCGGCAATaGTTTCTCTGGTTGCACGAC +
Preference number: 5 (lower is better)
Translates to: SQAGGGRRSWASGFLVILHCGRQ*FLWLHD
Trigger: GTCGTGCAACCAGAGAAACAATTGCCGCCCACAGTG...AAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp CAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTCAGCAGTATTTCCCGTaGACGGTTCCTGTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: QAGGGRRSWASGFLVILSQQYFP*TVPVVS
Trigger: GGACACCACAGGAACCGTCAACGGGAAATACTGCTG...ACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp CTCCCCAGAAGCGACTGCTGCTGTGCTTTGAAAACATGGAAACAGCTCACAGGCCTCGGCGGCAGAAATTaGCGACTTGGTCAGATGTCC +
Preference number: 5 (lower is better)
Translates to: LPRSDCCCALKTWKQLTGLGGRN*RLGQMS
Trigger: GGACATCTGACCAAGTCGCAAATTTCTGCCGCCGAG...GCCTGTGAGCTGTTTCCATGTTTTCAAAGCACAGCAGCAGTCGCTTCTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp CAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTTCGCTGCCAGCTGCATaGCAAAGGAGTTGCCACCAA +
Preference number: 5 (lower is better)
Translates to: QAGGGRRSWASGFLVILSSLPAA*QRSCHQ
Trigger: TTGGTGGCAACTCCTTTGCAATGCAGCTGGCAGCGA...ACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp AGGATGTCGCTGCCAGCTGCATTGCAAAGGAGTTGCCACCAAGATGAAACCGCAGGGGGACGTAGCTGGTaGATGAAATGCTTCCCTCAC +
Preference number: 5 (lower is better)
Translates to: RMSLPAALQRSCHQDETAGGRSW*MKCFPH
Trigger: GTGAGGGAAGCATTTCATCAACCAGCTACGTCCCCC...TGCGGTTTCATCTTGGTGGCAACTCCTTTGCAATGCAGCTGGCAGCGACATCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp AAACCTTTACCAACACCGCATCCCAGCAATAATGGGCCACCTCCCGAGGGCAGACAAGTCCCTGTTCTTTaGTGGCCACCACATTCCCTC +
Preference number: 5 (lower is better)
Translates to: KPLPTPHPSNNGPPPEGRQVPVL*WPPHSL
Trigger: GAGGGAATGTGGTGGCCACAAAAGAACAGGGACTTG...TCTGCCCTCGGGAGGTGGCCCATTATTGCTGGGATGCGGTGTTGGTAAAGGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS TCA 90 bp AATTACAGGCGTCATGAAGGATGGCGGCTCGTAAATCGAAGCCTTTaGAACAGGGGCTCACCGTCCGGCGGCATCAACACCTTGTTGTTC +
Preference number: 5 (lower is better)
Translates to: NYRRHEGWRLVNRSL*NRGSPSGGINTLLF
Trigger: GAACAACAAGGTGTTGATGCCGCCGGACGGTGAGCCCCTGTTTCAAAGGCTTCGATTTACGAGCCGCCATCCTTCATGACGCCTGTAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682043.1
CDS-3UTR CAA 90 bp GGGAGAGGTTCGTGTGGGATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGAAGCAGTACGTGTCCGGGTaGTTCTTATTAGCCACTTCC +
Preference number: 5 (lower is better)
Translates to: GRGSCGIGELFHFVTVSKQYVSG*FLLATS
Trigger: GGAAGTGGCTAATAAGAACAACCCGGACACGTACTG...CTTCGAGACCGTCACGAAATGAAACAACTCCCCGATCCCACACGAACCTCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR CAA 90 bp GGAGAGTCTTGGGCGCTTGGCTCCACGGGAAGCAAACACTTTCCCCTGCGACAGTTTTGTGAGACTGTTTaGTGTGGTGCAGTCAAAGGA +
Preference number: 5 (lower is better)
Translates to: GESWALGSTGSKHFPLRQFCETV*CGAVKG
Trigger: TCCTTTGACTGCACCACACAAAACAGTCTCACAAAA...CTGTCGCAGGGGAAAGTGTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp CATTGTTGGCCTAGGGGCTATGGTGGCATCGGGGCACGCATGTCAAATCCACTTGTTTTGCCTCTGTATTaGGCCTTCAGCGTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: HCWPRGYGGIGARMSNPLVLPLY*AFSVSS
Trigger: GGAAGAGACGCTGAAGGCCAAATACAGAGGCAAAAC...AAGTGGATTTGACATGCGTGCCCCGATGCCACCATAGCCCCTAGGCCAACAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp CCTGATTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCAGATGTCCGTACGATTTaGACCACAGCCCTGTATGTT +
Preference number: 5 (lower is better)
Translates to: PDLGQEKGKTWVSQEAGPDVRTI*TTALYV
Trigger: AACATACAGGGCTGTGGTCAAAATCGTACGGACATC...TGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAATCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp TTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCACGTCTGGAACTGTGGGAGGGTTaGGTTTCCTTGCATAAGTTT +
Preference number: 5 (lower is better)
Translates to: LGQEKGKTWVSQEAGPRLELWEG*VSLHKF
Trigger: AAACTTATGCAAGGAAACCAAACCCTCCCACAGTTC...CAGACGTGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp GAAAGAGCTGTAAGAATGGCCGAGTCAGAACTGGGACCAGACCCTTCTTATTCTGAGAGTCTTGGGCGCTaGGCTCCACGGGAAGCAAAC +
Preference number: 5 (lower is better)
Translates to: ERAVRMAESELGPDPSYSESLGR*APREAN
Trigger: GTTTGCTTCCCGTGGAGCCAAGCGCCCAAGACTCTC...AGAATAAGAAGGGTCTGGTCCCAGTTCTGACTCGGCCATTCTTACAGCTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS TCA 90 bp GAGAGAAGGTGCACACAGCACTACTGGCAGCTCAAGGAGGAAAGGTaGAGGAGAGCGCACGTGCTTCCTCCTTTCGTAACAATGACTGTT +
Preference number: 5 (lower is better)
Translates to: ERRCTQHYWQLKEER*RRAHVLPPFVTMTV
Trigger: AACAGTCATTGTTACGAAAGGAGGAAGCACGTGCGCTCTCCTTCACCTTTCCTCCTTGAGCTGCCAGTAGTGCTGTGTGCACCTTCTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682101.1
CDS-3UTR CAA 90 bp AAGAAGCAGGCCCACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCGAAGGGTCTTGCATATaGGAAGCTGACAAAGTGCTC +
Preference number: 5 (lower is better)
Translates to: KKQAHVWQGLMHDFNWHSEGSCI*EADKVL
Trigger: GAGCACTTTGTCAGCTTCCAATATGCAAGACCCTTC...GGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTGGGCCTGCTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp TCACAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTCAGTACGTGTCCGGGTaGTTCTTATTAGCCACTTCC +
Preference number: 5 (lower is better)
Translates to: SQAGGGRRSWASGFLVILQYVSG*FLLATS
Trigger: GGAAGTGGCTAATAAGAACAACCCGGACACGTACTG...AAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp GGTTCGTGTGGGATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGAAGAAGTTTGGCATCAACACCTTGTaGTTCTGTGTGCACCACCCC +
Preference number: 5 (lower is better)
Translates to: GSCGIGELFHFVTVSKKFGINTL*FCVHHP
Trigger: GGGGTGGTGCACACAGAACAACAAGGTGTTGATGCC...AAACTTCTTCGAGACCGTCACGAAATGAAACAACTCCCCGATCCCACACGAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR CAA 90 bp GGAGACAGAAGTGACATTTGTGCTGCAAGTCCCTGTTCTTTTGTGGCCACCACAGGCGGCATCAACACCTaGTTGTTCTGTGTGCACCAC +
Preference number: 5 (lower is better)
Translates to: GDRSDICAASPCSFVATTGGINT*LFCVHH
Trigger: GTGGTGCACACAGAACAACAAGGTGTTGATGCCGCC...TGTGGTGGCCACAAAAGAACAGGGACTTGCAGCACAAATGTCACTTCTGTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp GAAACGACACCCATCTTCAAAAGGCTGATCAAAATCAACCTTCTAGAGAGGGCAGGACCTTCCAGGAGGTaGGCGGGTGCTGTCCTCGAA +
Preference number: 5 (lower is better)
Translates to: ETTPIFKRLIKINLLERAGPSRR*AGAVLE
Trigger: TTCGAGGACAGCACCCGCCAACCTCCTGGAAGGTCC...TGCCCTCTCTAGAAGGTTGATTTTGATCAGCCTTTTGAAGATGGGTGTCGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp AAACCTTTACCAACACCGCATCCCAGCAATAATGGGCCACCTCCCGAGGGCAGACTGCATGGCACAGCATaGACAGTTTACTTGGTTCAG +
Preference number: 5 (lower is better)
Translates to: KPLPTPHPSNNGPPPEGRLHGTA*TVYLVQ
Trigger: CTGAACCAAGTAAACTGTCAATGCTGTGCCATGCAG...TCTGCCCTCGGGAGGTGGCCCATTATTGCTGGGATGCGGTGTTGGTAAAGGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp AAACCTTTACCAACACCGCATCCCAGCAATAATGGGCCACCTCCCGAGGGCAGAGACTGCTGCTGTGCTTaGAAAACATGGAAACAGCTC +
Preference number: 5 (lower is better)
Translates to: KPLPTPHPSNNGPPPEGRDCCCA*KTWKQL
Trigger: GAGCTGTTTCCATGTTTTCAAAGCACAGCAGCAGTC...TCTGCCCTCGGGAGGTGGCCCATTATTGCTGGGATGCGGTGTTGGTAAAGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp TTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCACGTCTGCCTTGGCGACATTCTTaGTTTTCAAAGAATGCAGTC +
Preference number: 5 (lower is better)
Translates to: LGQEKGKTWVSQEAGPRLPWRHS*FSKNAV
Trigger: GACTGCATTCTTTGAAAACAAAGAATGTCGCCAAGG...CAGACGTGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp TCCACCACGACGGAAATCCCCGGAGAATCCAGGCTCAGAAGGACACTGGCAACAAATCGTTTGACAGAGTaGAACTCCACAAGACTGAGC +
Preference number: 5 (lower is better)
Translates to: STTTEIPGESRLRRTLATNRLTE*NSTRLS
Trigger: GCTCAGTCTTGTGGAGTTCAACTCTGTCAAACGATT...TGTTGCCAGTGTCCTTCTGAGCCTGGATTCTCCGGGGATTTCCGTCGTGGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp GCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTGGCGCCCTTTCCAATCGTTaGACAGAGTTGAACTCCACA +
Preference number: 5 (lower is better)
Translates to: AGGGRRSWASGFLVILSGALSNR*TELNST
Trigger: TGTGGAGTTCAACTCTGTCAAACGATTGGAAAGGGC...GCCACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS TCA 90 bp CTCGGCGGCAGAAATTTGCGACTTGGTCAGATGTCCGTACGATTTTaGCCACAGCCCTGTATGTTTTGCCTCTGTATTTGGCCTTCAGCG +
Preference number: 5 (lower is better)
Translates to: LGGRNLRLGQMSVRF*PQPCMFCLCIWPSA
Trigger: CGCTGAAGGCCAAATACAGAGGCAAAACATACAGGGCTGTGGTCAAAATCGTACGGACATCTGACCAAGTCGCAAATTTCTGCCGCCGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS CCA 90 bp CAGCACTCTAGCTTGGCACAGACTCGGCGGCAGAAATTTGCGACTTaGTCAGATGTCCGTACGATTTTGACCACAGCCCTGTATGTTTTG +
Preference number: 5 (lower is better)
Translates to: QHSSLAQTRRQKFAT*SDVRTILTTALYVL
Trigger: CAAAACATACAGGGCTGTGGTCAAAATCGTACGGACATCTGACCAAGTCGCAAATTTCTGCCGCCGAGTCTGTGCCAAGCTAGAGTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS-3UTR CAA 90 bp TGGGAGAGGTTCGTGTGGGATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGAAGAAGGGTCTTGCATATaGGAAGCTGACAAAGTGCTC +
Preference number: 5 (lower is better)
Translates to: WERFVWDRGVVSFRDGLEEGSCI*EADKVL
Trigger: GAGCACTTTGTCAGCTTCCAATATGCAAGACCCTTC...TTCGAGACCGTCACGAAATGAAACAACTCCCCGATCCCACACGAACCTCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR CAA 90 bp CATTGTTGGCCTAGGGGCTATGGTGGCATCGGGGCACGCATGTCAAATCCACTTCAGTTTCCTCCAAGCTaGAGCCTTCTTCAGAATCAA +
Preference number: 5 (lower is better)
Translates to: HCWPRGYGGIGARMSNPLQFPPS*SLLQNQ
Trigger: TTGATTCTGAAGAAGGCTCAAGCTTGGAGGAAACTG...AAGTGGATTTGACATGCGTGCCCCGATGCCACCATAGCCCCTAGGCCAACAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp GGGAGAGGTTCGTGTGGGATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGAAGCAGTTTCCTCCAAGCTaGAGCCTTCTTCAGAATCAA +
Preference number: 5 (lower is better)
Translates to: GRGSCGIGELFHFVTVSKQFPPS*SLLQNQ
Trigger: TTGATTCTGAAGAAGGCTCAAGCTTGGAGGAAACTG...CTTCGAGACCGTCACGAAATGAAACAACTCCCCGATCCCACACGAACCTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR CAA 90 bp TGTGCTCGTGTGATTACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGGCATCAACACCTTGTaGTTCTGTGTGCACCACCCC +
Preference number: 5 (lower is better)
Translates to: CARVITGNTTAWREVSSLGINTL*FCVHHP
Trigger: GGGGTGGTGCACACAGAACAACAAGGTGTTGATGCC...CAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCACACGAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp TTTCAGTCCTGGAAACCTTTACCAACACCGCATCCCAGCAATAATGGGCCACCTTCTGTGTACTTCTCTTaGATTGCGTCCGGCGGCATC +
Preference number: 5 (lower is better)
Translates to: FQSWKPLPTPHPSNNGPPSVYFS*IASGGI
Trigger: GATGCCGCCGGACGCAATCAAAGAGAAGTACACAGA...AGGTGGCCCATTATTGCTGGGATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp TTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCACGTCTTCTGTATTTATTCTCTaGACACCAACCAACTGGTCG +
Preference number: 5 (lower is better)
Translates to: FGAGERQNVGEPRSRPTSSVFIL*TPTNWS
Trigger: CGACCAGTTGGTTGGTGTCAAGAGAATAAATACAGA...AGACGTGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp CAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTGCAGAAATTTGCGACTaGGTCAGATGTCCGTACGAT +
Preference number: 5 (lower is better)
Translates to: QAGGGRRSWASGFLVILSAEICD*VRCPYD
Trigger: ATCGTACGGACATCTGACCAAGTCGCAAATTTCTGC...ACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp AATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATCCCAGCAATAATGGGACAGCACTCTAGCTaGGCACAGACTCGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: NQSFSPGNLYQHRIPAIMGQHSS*AQTRRQ
Trigger: CTGCCGCCGAGTCTGTGCCAAGCTAGAGTGCTGTCC...CATTATTGCTGGGATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp TCACAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTCAGTTTCCTCCAAGCTaGAGCCTTCAGAATCAAGGT +
Preference number: 5 (lower is better)
Translates to: SQAGGGRRSWASGFLVILQFPPS*SLQNQG
Trigger: ACCTTGATTCTGAAGGCTCAAGCTTGGAGGAAACTG...AAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000673876.1
CDS TCA 90 bp TTCTACGCAAGGTTCTCTCTGCTCCTTGCAAAATTACAGGCGTCATaGAGGATGGCGGCTCGTAAATCGAAGCCTTTGAAACAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: FYARFSLLLAKLQAS*RMAARKSKPLKQGL
Trigger: GAGCCCCTGTTTCAAAGGCTTCGATTTACGAGCCGCCATCCTTCATGACGCCTGTAATTTTGCAAGGAGCAGAGAGAACCTTGCGTAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682043.1
CDS-3UTR CAA 90 bp GCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTGGCGCATTGACAGTTTACTaGGTTCAGGTCTTAGGTCAT +
Preference number: 5 (lower is better)
Translates to: AGGGRRSWASGFLVILSGALTVY*VQVLGH
Trigger: ATGACCTAAGACCTGAACCAAGTAAACTGTCAATGC...GCCACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp CACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCCCAGAAGCGACTCAATTGTTTCTCTGGTaGCACGACTGCAATCTTTCT +
Preference number: 5 (lower is better)
Translates to: HVWQGLMHDFNWHSPEATQLFLW*HDCNLS
Trigger: AGAAAGATTGCAGTCGTGCAACCAGAGAAACAATTG...AGTCGCTTCTGGGGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp CAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTTCAGCAGTATTTCCCGTaGACGGTTCCTGTGGTGTCC +
Preference number: 5 (lower is better)
Translates to: QETLQHGVRFLPWRHSLFQQYFP*TVPVVS
Trigger: GGACACCACAGGAACCGTCAACGGGAAATACTGCTG...AAACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp CTCCCCAGAAGCGACTGCTGCTGTGCTTTGAAAACATGGAAACAGCTCACAGGCCGTGAGGTTTCTTCCTaGGCGACATTCTTTGTTTTC +
Preference number: 5 (lower is better)
Translates to: LPRSDCCCALKTWKQLTGREVSS*ATFFVF
Trigger: GAAAACAAAGAATGTCGCCAAGGAAGAAACCTCACG...GCCTGTGAGCTGTTTCCATGTTTTCAAAGCACAGCAGCAGTCGCTTCTGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp GGTTCGTGTGGGATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGAAGAAGTTTACAGAAGCTGATGGCTaGACATCACTCTCTACGTCC +
Preference number: 5 (lower is better)
Translates to: GSCGIGELFHFVTVSKKFTEADG*TSLSTS
Trigger: GGACGTAGAGAGTGATGTCAAGCCATCAGCTTCTGT...AAACTTCTTCGAGACCGTCACGAAATGAAACAACTCCCCGATCCCACACGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS GCA 90 bp GACCTTTGCACTAAGACCATTAGGGATTCTACGCAAGGTTCTCTCTaGTCCTTGCAAAATTACAGGCGTCATGAAGGATGGCGGCTCGTA +
Preference number: 5 (lower is better)
Translates to: DLCTKTIRDSTQGSL*SLQNYRRHEGWRLV
Trigger: TACGAGCCGCCATCCTTCATGACGCCTGTAATTTTGCAAGGAGCAGAGAGAACCTTGCGTAGAATCCCTAATGGTCTTAGTGCAAAGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682043.1
CDS CCA 90 bp AGCCGAGACACTTTTCCAAGGGTGAAGATGAAGGGTCTTGCATATTaGAAGCTGACAAAGTGCTCTCCATGCCTGATGAGCAAGTGTCTC +
Preference number: 5 (lower is better)
Translates to: SRDTFPRVKMKGLAY*KLTKCSPCLMSKCL
Trigger: GAGACACTTGCTCATCAGGCATGGAGAGCACTTTGTCAGCTTCCAATATGCAAGACCCTTCATCTTCACCCTTGGAAAAGTGTCTCGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000361972.8
ENST00000379711.2
ENST00000379713.8
ENST00000397167.6
ENST00000673876.1
ENST00000682043.1
ENST00000682101.1
ENST00000682180.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS-3UTR CAA 90 bp ACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTTCTGTGTACTTCTCTTaGATTGCGTCCGGCGGCATC +
Preference number: 5 (lower is better)
Translates to: TGNTTAWREVSSLATFFVSVYFS*IASGGI
Trigger: GATGCCGCCGGACGCAATCAAAGAGAAGTACACAGA...AACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp CAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTTAGTTTTTGTGAGACTGTTTaGTGTGGTGCAGTCAAAGGA +
Preference number: 5 (lower is better)
Translates to: QAGGGRRSWASGFLVILSFCETV*CGAVKG
Trigger: TCCTTTGACTGCACCACACAAAACAGTCTCACAAAA...ACTAAGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp CCTGATTTGGGGCAGGAGAAAGGCAAAACGTGGGTGAGCCAAGAAGCAGGCCCATATATAATCCAACATTaGCCTAAAAGACTCACTCCC +
Preference number: 5 (lower is better)
Translates to: PDLGQEKGKTWVSQEAGPYIIQH*PKRLTP
Trigger: GGGAGTGAGTCTTTTAGGCAAATGTTGGATTATATA...TGGGCCTGCTTCTTGGCTCACCCACGTTTTGCCTTTCTCCTGCCCCAAATCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp CACGTCTGGCAGGGTCTGATGCATGACTTTAACTGGCACTCCCCAGAAGCGACTTTAAGAAGGGTGAGCTaGAGCAATCAAAGTTTCCAA +
Preference number: 5 (lower is better)
Translates to: HVWQGLMHDFNWHSPEATLRRVS*SNQSFQ
Trigger: TTGGAAACTTTGATTGCTCAAGCTCACCCTTCTTAA...AGTCGCTTCTGGGGAGTGCCAGTTAAAGTCATGCATCAGACCCTGCCAGACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp CTCACAGGCTGGCGGAGGCAGAAGATCCTGGGCTTCTGGTTTTCTGGTGATACTGTGTCTGACTCCAACTaGGATCAAATGACTCTAATT +
Preference number: 5 (lower is better)
Translates to: LTGWRRQKILGFWFSGDTVSDSN*DQMTLI
Trigger: AATTAGAGTCATTTGATCCAAGTTGGAGTCAGACAC...AGTATCACCAGAAAACCAGAAGCCCAGGATCTTCTGCCTCCGCCAGCCTGTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp GATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGAAGAAGTTTTGAGACATCCTTGTGGGATCGGGGAGTaGTTTCATTTCGTGACGGTC +
Preference number: 5 (lower is better)
Translates to: DRGVVSFRDGLEEVLRHPCGIGE*FHFVTV
Trigger: GACCGTCACGAAATGAAACAACTCCCCGATCCCACA...AGGATGTCTCAAAACTTCTTCGAGACCGTCACGAAATGAAACAACTCCCCGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS GCA 90 bp TTAGCTGAGCCGAGACACTTTTCCAAGGGTGAAGATGAAGGGTCTTaGATATTGGAAGCTGACAAAGTGCTCTCCATGCCTGATGAGCAA +
Preference number: 5 (lower is better)
Translates to: LAEPRHFSKGEDEGS*ILEADKVLSMPDEQ
Trigger: TTGCTCATCAGGCATGGAGAGCACTTTGTCAGCTTCCAATATGCAAGACCCTTCATCTTCACCCTTGGAAAAGTGTCTCGGCTCAGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000361972.8
ENST00000379711.2
ENST00000379713.8
ENST00000397167.6
ENST00000673876.1
ENST00000682043.1
ENST00000682101.1
ENST00000682180.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS-3UTR CAA 90 bp ACATATCCCGGAAAATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATGGCGGCATCAACACCTaGTTGTTCTGTGTGCACCAC +
Preference number: 5 (lower is better)
Translates to: TYPGKSKFQSWKPLPTPHGGINT*LFCVHH
Trigger: GTGGTGCACACAGAACAACAAGGTGTTGATGCCGCC...ATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATTTTCCGGGATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp TTGAAAGTGATGGATGAGTTCCCCACGCTGTGCAGCTCCGTGGTGAAGTTCACTCAATTGTTTCTCTGGTaGCACGACTGCAATCTTTCT +
Preference number: 5 (lower is better)
Translates to: LKVMDEFPTLCSSVVKFTQLFLW*HDCNLS
Trigger: AGAAAGATTGCAGTCGTGCAACCAGAGAAACAATTG...AGTGAACTTCACCACGGAGCTGCACAGCGTGGGGAACTCATCCATCACTTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp ACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTGTTTTGCCTCTGTATTaGGCCTTCAGCGTCTCTTCC +
Preference number: 5 (lower is better)
Translates to: TGNTTAWREVSSLATFFVVLPLY*AFSVSS
Trigger: GGAAGAGACGCTGAAGGCCAAATACAGAGGCAAAAC...AACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp TTAACTGGCACTCCCCAGAAGCGACTGCTGCTGTGCTTTGAAAACATGGAAACAGCAGAAATTTGCGACTaGGTCAGATGTCCGTACGAT +
Preference number: 5 (lower is better)
Translates to: LTGTPQKRLLLCFENMETAEICD*VRCPYD
Trigger: ATCGTACGGACATCTGACCAAGTCGCAAATTTCTGC...TGTTTCCATGTTTTCAAAGCACAGCAGCAGTCGCTTCTGGGGAGTGCCAGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp ACATATCCCGGAAAATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATCAGAAGCAGGAGTGCTaGGCCGTCAATATCCTGCTC +
Preference number: 5 (lower is better)
Translates to: TYPGKSKFQSWKPLPTPHQKQEC*AVNILL
Trigger: GAGCAGGATATTGACGGCCAAGCACTCCTGCTTCTG...ATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATTTTCCGGGATATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp TGTGCTCGTGTGATTACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGACTGCTGCTGTGCTTaGAAAACATGGAAACAGCTC +
Preference number: 5 (lower is better)
Translates to: CARVITGNTTAWREVSSLDCCCA*KTWKQL
Trigger: GAGCTGTTTCCATGTTTTCAAAGCACAGCAGCAGTC...CAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGTAATCACACGAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp TGGGAGAGGTTCGTGTGGGATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGAAGGTCTCGAAGAAGTTTaGAGACATCCTTTTCTAAGA +
Preference number: 5 (lower is better)
Translates to: WERFVWDRGVVSFRDGLEGLEEV*RHPFLR
Trigger: TCTTAGAAAAGGATGTCTCAAAACTTCTTCGAGACC...TTCGAGACCGTCACGAAATGAAACAACTCCCCGATCCCACACGAACCTCTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR CAA 90 bp GATCGGGGAGTTGTTTCATTTCGTGACGGTCTCGAAGAAGTTTTGAGACATCCTTGGGTTGGTTTATGTTaGAGGGTGGTGGGAGAGGTT +
Preference number: 5 (lower is better)
Translates to: DRGVVSFRDGLEEVLRHPWVGLC*RVVGEV
Trigger: AACCTCTCCCACCACCCTCAAACATAAACCAACCCA...AGGATGTCTCAAAACTTCTTCGAGACCGTCACGAAATGAAACAACTCCCCGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS-3UTR CAA 90 bp GGAAATGGATGCCCTTTCCAATCGTTTGACAGAGTTGAACTCCACAAGACTGAGCTGCATGGCACAGCATaGACAGTTTACTTGGTTCAG +
Preference number: 5 (lower is better)
Translates to: GNGCPFQSFDRVELHKTELHGTA*TVYLVQ
Trigger: CTGAACCAAGTAAACTGTCAATGCTGTGCCATGCAG...CTCAGTCTTGTGGAGTTCAACTCTGTCAAACGATTGGAAAGGGCATCCATTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp AGGGAGACAGAAGTGACATTTGTGCTGCAAGTCCCTGTTCTTTTGTGGCCACCACCTTGGCGACATTCTTaGTTTTCAAAGAATGCAGTC +
Preference number: 5 (lower is better)
Translates to: RETEVTFVLQVPVLLWPPPWRHS*FSKNAV
Trigger: GACTGCATTCTTTGAAAACAAAGAATGTCGCCAAGG...TGGTGGCCACAAAAGAACAGGGACTTGCAGCACAAATGTCACTTCTGTCTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp AGCTGTAAGAATGGCCGAGTCAGAACTGGGACCAGACCCTTCTTATTCTTTCTTAGAGGAAGTGAAGCCTaGATTCGCCATCTCAATCCA +
Preference number: 5 (lower is better)
Translates to: SCKNGRVRTGTRPFLFFLRGSEA*IRHLNP
Trigger: TGGATTGAGATGGCGAATCAAGGCTTCACTTCCTCT...AAGAAAGAATAAGAAGGGTCTGGTCCCAGTTCTGACTCGGCCATTCTTACAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS TCA 90 bp AAGCACGCATCTGCTGAAGGATATATGCAAAGGTGCTGTCAGGTCTaGGCTCACGTAACTGGGGTGCTTCAGAGATACATTAGATGTATA +
Preference number: 5 (lower is better)
Translates to: KHASAEGYMQRCCQV*AHVTGVLQRYIRCI
Trigger: TATACATCTAATGTATCTCTGAAGCACCCCAGTTACGTGAGCTCAGACCTGACAGCACCTTTGCATATATCCTTCAGCAGATGCGTGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379713.8
ENST00000682101.1
CDS CCA 90 bp GCCCTGTATGTTTTGCCTCTGTATTTGGCCTTCAGCGTCTCTTCCTaGAAATTCCAGTGGGGATCTTCTACCAGCTGTAATTCTCTTAAT +
Preference number: 5 (lower is better)
Translates to: ALYVLPLYLAFSVSS*KFQWGSSTSCNSLN
Trigger: ATTAAGAGAATTACAGCTGGTAGAAGATCCCCACTGGAATTTCCAGGAAGAGACGCTGAAGGCCAAATACAGAGGCAAAACATACAGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS-3UTR CAA 90 bp TTTCAGTCCTGGAAACCTTTACCAACACCGCATCCCAGCAATAATGGGCCACCTGGCAGTATGGATATCTaGCCAACAATTTCTTCCTTA +
Preference number: 5 (lower is better)
Translates to: FQSWKPLPTPHPSNNGPPGSMDI*PTISSL
Trigger: TAAGGAAGAAATTGTTGGCAAGATATCCATACTGCC...AGGTGGCCCATTATTGCTGGGATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS-3UTR CAA 90 bp AATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATCCCAGCAATAATGGAAGGGTCTTGCATATaGGAAGCTGACAAAGTGCTC +
Preference number: 5 (lower is better)
Translates to: NQSFSPGNLYQHRIPAIMEGSCI*EADKVL
Trigger: GAGCACTTTGTCAGCTTCCAATATGCAAGACCCTTC...CATTATTGCTGGGATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp ACAGGAAACACTACAGCATGGCGTGAGGTTTCTTCCTTGGCGACATTCTTTGTTGCATTGACAGTTTACTaGGTTCAGGTCTTAGGTCAT +
Preference number: 5 (lower is better)
Translates to: TGNTTAWREVSSLATFFVALTVY*VQVLGH
Trigger: ATGACCTAAGACCTGAACCAAGTAAACTGTCAATGC...AACAAAGAATGTCGCCAAGGAAGAAACCTCACGCCATGCTGTAGTGTTTCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS TCA 90 bp GAAGTTTTGAGACATCCTTTTCTAAGAAATATGTTGAACAGAAGCTaGTGGCTTGACATCACTCTCTACGTCCGGCGGCATCAACACCTT +
Preference number: 5 (lower is better)
Translates to: EVLRHPFLRNMLNRS*WLDITLYVRRHQHL
Trigger: AAGGTGTTGATGCCGCCGGACGTAGAGAGTGATGTCAAGCCATCAGCTTCTGTTCAACATATTTCTTAGAAAAGGATGTCTCAAAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS TCA 90 bp TTTACCTTCTTCAGTAAATCACTCGATTACTCAGTGAATCTTTACTaGGAATTCCTCAAGCACAGGCAGCACGTGCTAGAGCTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: FTFFSKSLDYSVNLY*EFLKHRQHVLELVY
Trigger: GTACACCAGCTCTAGCACGTGCTGCCTGTGCTTGAGGAATTCTCAGTAAAGATTCACTGAGTAATCGAGTGATTTACTGAAGAAGGTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682101.1
CDS-3UTR CAA 90 bp AATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATCCCAGCAATAATGCGTGAGGTTTCTTCCTaGGCGACATTCTTTGTTTTC +
Preference number: 5 (lower is better)
Translates to: NQSFSPGNLYQHRIPAIMREVSS*ATFFVF
Trigger: GAAAACAAAGAATGTCGCCAAGGAAGAAACCTCACG...CATTATTGCTGGGATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp ACATATCCCGGAAAATCAAAGTTTCAGTCCTGGAAACCTTTACCAACACCGCATTCTGTATTTATTCTCTaGACACCAACCAACTGGTCG +
Preference number: 5 (lower is better)
Translates to: TYPGKSKFQSWKPLPTPHSVFIL*TPTNWS
Trigger: CGACCAGTTGGTTGGTGTCAAGAGAATAAATACAGA...ATGCGGTGTTGGTAAAGGTTTCCAGGACTGAAACTTTGATTTTCCGGGATATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361972.8
ENST00000673876.1
CDS-3UTR CAA 90 bp GAAACGACACCCATCTTCAAAAGGCTGATCAAAATCAACCTTCTAGAGAGGGCAGGCAAATCTCAGAACTaGCCAAATACAACACTCAAA +
Preference number: 5 (lower is better)
Translates to: ETTPIFKRLIKINLLERAGKSQN*PNTTLK
Trigger: TTTGAGTGTTGTATTTGGCAAGTTCTGAGATTTGCC...TGCCCTCTCTAGAAGGTTGATTTTGATCAGCCTTTTGAAGATGGGTGTCGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000361972.8
CDS CCA 90 bp ATAGTAATAGGTGTATTTGGTTTTGGTATGAATGGAGCAGTTCTCTaGGCAGTTTTCAGATATCAGCACAGGACTAAACAAATTTGGACA +
Preference number: 5 (lower is better)
Translates to: IVIGVFGFGMNGAVL*AVFRYQHRTKQIWT
Trigger: TGTCCAAATTTGTTTAGTCCTGTGCTGATATCTGAAAACTGCCCAGAGAACTGCTCCATTCATACCAAAACCAAATACACCTATTACTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS CCA 72 bp CGGGCCGAGGGCACCTCCGCCGACGAGGTGTCCGTCTaGTCATCCCGGAGCTCGGAGCCGGTCTCCTCACTG +
Preference number: 6 (lower is better)
Translates to: RAEGTSADEVSV*SSRSSEPVSSL
Trigger: CAGTGAGGAGACCGGCTCCGAGCTCCGGGATGACCAGACGGACACCTCGTCGGCGGAGGTGCCCTCGGCCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS CCA 72 bp CGGAGCCGGTCTCCTCACTGGCGGTGTCATCGTCCATaGCGTCAGCGTCCTCCTCTTCACTTTCCTCCCCCG +
Preference number: 6 (lower is better)
Translates to: RSRSPHWRCHRP*RQRPPLHFPPP
Trigger: CGGGGGAGGAAAGTGAAGAGGAGGACGCTGACGCCATGGACGATGACACCGCCAGTGAGGAGACCGGCTCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS CCA 72 bp TCTGGTCATCCCGGAGCTCGGAGCCGGTCTCCTCACTaGCGGTGTCATCGTCCATGGCGTCAGCGTCCTCCT +
Preference number: 6 (lower is better)
Translates to: SGHPGARSRSPH*RCHRPWRQRPP
Trigger: AGGAGGACGCTGACGCCATGGACGATGACACCGCCAGTGAGGAGACCGGCTCCGAGCTCCGGGATGACCAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS TCA 72 bp TCTGTGTGCACCACCCCACGGGGTGCAAATCCGCGATaGCTACGTCACACCAGAAGTCGGCCCTGCGGTCCT +
Preference number: 6 (lower is better)
Translates to: SVCTTPRGANPR*LRHTRSRPCGP
Trigger: AGGACCGCAGGGCCGACTTCTGGTGTGACGTAGTCATCGCGGATTTGCACCCCGTGGGGTGGTGCACACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000361972.8
ENST00000379711.2
ENST00000379713.8
ENST00000397167.6
ENST00000673876.1
ENST00000682043.1
ENST00000682101.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS CCA 72 bp AAATGGATTTCCGTCGCTTCCTCCGCCTGGCGGGTTTaGGGTGTCCGCTGTCGGGGTTGCTTTCCCCGATGG +
Preference number: 6 (lower is better)
Translates to: KWISVASSAWRV*GVRCRGCFPRW
Trigger: CCATCGGGGAAAGCAACCCCGACAGCGGACACCCCAAACCCGCCAGGCGGAGGAAGCGACGGAAATCCATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS TCA 72 bp CGTCCTCCTCTTCACTTTCCTCCCCCGAGCCCGCGGTaGAGTCCACGGCAGAAGACCTCCGTTTCTTCTGCA +
Preference number: 6 (lower is better)
Translates to: RPPLHFPPPSPR*SPRQKTSVSSA
Trigger: TGCAGAAGAAACGGAGGTCTTCTGCCGTGGACTTCACCGCGGGCTCGGGGGAGGAAAGTGAAGAGGAGGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS TCA 72 bp AACTGGGCAAACTCCCGTTTCCCTGGCTGCGGTTCGTaGGCTGGGTTTCCAATGGCTCAGTCGACCGTGTGC +
Preference number: 6 (lower is better)
Translates to: NWANSRFPGCGS*AGFPMAQSTVC
Trigger: GCACACGGTCGACTGAGCCATTGGAAACCCAGCTCACGAACCGCAGCCAGGGAAACGGGAGTTTGCCCAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379713.8
ENST00000682180.1
CDS CCA 72 bp CCTCCGCAAGGACAACTGGGCAAACTCCCGTTTCCCTaGCTGCGGTTCGTGAGCTGGGTTTCCAATGGCTCA +
Preference number: 6 (lower is better)
Translates to: PPQGQLGKLPFP*LRFVSWVSNGS
Trigger: TGAGCCATTGGAAACCCAGCTCACGAACCGCAGCCAGGGAAACGGGAGTTTGCCCAGTTGTCCTTGCGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379713.8
ENST00000682180.1
CDS CCA 72 bp AGGCAGCACGTGCTAGAGCTGGTGTACACAGACGAGTaGGTTCACACCATGCAGCTTACTGTCGTCCGGCGG +
Preference number: 6 (lower is better)
Translates to: RQHVLELVYTDE*VHTMQLTVVRR
Trigger: CCGCCGGACGACAGTAAGCTGCATGGTGTGAACCCACTCGTCTGTGTACACCAGCTCTAGCACGTGCTGCCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682101.1
CDS TCA 72 bp CGTCATGAAGGATGGCGGCTCGTAAATCGAAGCCTTTaGAACAGGGGCTCACCGTCCGGCGGCATCAACACC +
Preference number: 6 (lower is better)
Translates to: RHEGWRLVNRSL*NRGSPSGGINT
Trigger: GGTGTTGATGCCGCCGGACGGTGAGCCCCTGTTTCAAAGGCTTCGATTTACGAGCCGCCATCCTTCATGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682043.1
CDS GCA 72 bp AGGGGCTTCCTGCGCCCCATGCTGCTTGTGATAATCTaGCCAGTCGAAGTCCTGGCCAGAGTAACCTTTGGG +
Preference number: 6 (lower is better)
Translates to: RGFLRPMLLVII*PVEVLARVTFG
Trigger: CCCAAAGGTTACTCTGGCCAGGACTTCGACTGGGCAGATTATCACAAGCAGCATGGGGCGCAGGAAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS CCA 72 bp CCACGGCAGAAGACCTCCGTTTCTTCTGCACGAAAATaGATTTCCGTCGCTTCCTCCGCCTGGCGGGTTTGG +
Preference number: 6 (lower is better)
Translates to: PRQKTSVSSARK*ISVASSAWRVW
Trigger: CCAAACCCGCCAGGCGGAGGAAGCGACGGAAATCCATTTTCGTGCAGAAGAAACGGAGGTCTTCTGCCGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS CCA 72 bp GGCAAACTCCCGTTTCCCTGGCTGCGGTTCGTGAGCTaGGTTTCCAATGGCTCAGTCGACCGTGTGCACAAA +
Preference number: 6 (lower is better)
Translates to: GKLPFPWLRFVS*VSNGSVDRVHK
Trigger: TTTGTGCACACGGTCGACTGAGCCATTGGAAACCCAGCTCACGAACCGCAGCCAGGGAAACGGGAGTTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379713.8
ENST00000682180.1
CDS CAA 72 bp TGCAGCTTACTGTCGTCCGGCGGCATCAACACCTTGTaGTTCTGTGTGCACCACCCCACGGGGTGCAAATCC +
Preference number: 6 (lower is better)
Translates to: CSLLSSGGINTL*FCVHHPTGCKS
Trigger: GGATTTGCACCCCGTGGGGTGGTGCACACAGAACAACAAGGTGTTGATGCCGCCGGACGACAGTAAGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682101.1
CDS CAA 72 bp CCATGCAGCTTACTGTCGTCCGGCGGCATCAACACCTaGTTGTTCTGTGTGCACCACCCCACGGGGTGCAAA +
Preference number: 6 (lower is better)
Translates to: PCSLLSSGGINT*LFCVHHPTGCK
Trigger: TTTGCACCCCGTGGGGTGGTGCACACAGAACAACAAGGTGTTGATGCCGCCGGACGACAGTAAGCTGCATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682101.1
CDS CAA 90 bp AGCTTAATGAACCTCACCACGTCGGTGACCGTCCACTCCAACGGGTaGCTCTCCAGAACCAGTCTCTCCTCCTCCTCCTGTTTCGTGTCC +
Preference number: 6 (lower is better)
Translates to: SLMNLTTSVTVHSNG*LSRTSLSSSSCFVS
Trigger: GGACACGAAACAGGAGGAGGAGGAGAGACTGGTTCTGGAGAGCAACCCGTTGGAGTGGACGGTCACCGACGTGGTGAGGTTCATTAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS CAA 90 bp GATGGCTTGACATCACTCTCTACGTCCGGCGGCATCAACACCTTGTaGTTCTGTGTGCACCACCCCACGGGGTGCAAATCCGCGATGACT +
Preference number: 6 (lower is better)
Translates to: DGLTSLSTSGGINTL*FCVHHPTGCKSAMT
Trigger: AGTCATCGCGGATTTGCACCCCGTGGGGTGGTGCACACAGAACAACAAGGTGTTGATGCCGCCGGACGTAGAGAGTGATGTCAAGCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS CAA 90 bp TTCACACCATGCAGCTTACTGTCGTCCGGCGGCATCAACACCTTGTaGTTCTGTGTGCACCACCCCACGGGGTGCAAATCCGCGATGACT +
Preference number: 6 (lower is better)
Translates to: FTPCSLLSSGGINTL*FCVHHPTGCKSAMT
Trigger: AGTCATCGCGGATTTGCACCCCGTGGGGTGGTGCACACAGAACAACAAGGTGTTGATGCCGCCGGACGACAGTAAGCTGCATGGTGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682101.1
CDS GCA 72 bp GCGGTGAAGTCCACGGCAGAAGACCTCCGTTTCTTCTaGACGAAAATGGATTTCCGTCGCTTCCTCCGCCTG +
Preference number: 6 (lower is better)
Translates to: AVKSTAEDLRFF*TKMDFRRFLRL
Trigger: CAGGCGGAGGAAGCGACGGAAATCCATTTTCGTGCAGAAGAAACGGAGGTCTTCTGCCGTGGACTTCACCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS GCA 72 bp GGCTGGAAATCCAGGCTCGCATGTCCAGAGAGAAGGTaGACACAGCACTACTGGCAGCTCAAGGAGGAAAGG +
Preference number: 6 (lower is better)
Translates to: GWKSRLACPERR*TQHYWQLKEER
Trigger: CCTTTCCTCCTTGAGCTGCCAGTAGTGCTGTGTGCACCTTCTCTCTGGACATGCGAGCCTGGATTTCCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682101.1
CDS CAA 72 bp ACATCACTCTCTACGTCCGGCGGCATCAACACCTTGTaGTTCTGTGTGCACCACCCCACGGGGTGCAAATCC +
Preference number: 6 (lower is better)
Translates to: TSLSTSGGINTL*FCVHHPTGCKS
Trigger: GGATTTGCACCCCGTGGGGTGGTGCACACAGAACAACAAGGTGTTGATGCCGCCGGACGTAGAGAGTGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS GCA 72 bp TTTCCCTCGCAGAGGACCTTCCAGGAGGTTGGCGGGTaGTGTCCTCGAACCAGTCAAGTCACGTATGAGAAA +
Preference number: 6 (lower is better)
Translates to: FPSQRTFQEVGG*CPRTSQVTYEK
Trigger: TTTCTCATACGTGACTTGACTGGTTCGAGGACAGCACCCGCCAACCTCCTGGAAGGTCCTCTGCGAGGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000683762.1
CDS CCA 72 bp GTTTCCCTGGCTGCGGTTCGTGAGCTGGGTTTCCAATaGCTCAGTCGACCGTGTGCACAAACTTGCGCTTTA +
Preference number: 6 (lower is better)
Translates to: VSLAAVRELGFQ*LSRPCAQTCAL
Trigger: TAAAGCGCAAGTTTGTGCACACGGTCGACTGAGCCATTGGAAACCCAGCTCACGAACCGCAGCCAGGGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682180.1
CDS CAA 72 bp TTCTCTTTGATTGCGTCCGGCGGCATCAACACCTTGTaGTTCTGTGTGCACCACCCCACGGGGTGCAAATCC +
Preference number: 6 (lower is better)
Translates to: FSLIASGGINTL*FCVHHPTGCKS
Trigger: GGATTTGCACCCCGTGGGGTGGTGCACACAGAACAACAAGGTGTTGATGCCGCCGGACGCAATCAAAGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000379713.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
CDS CAA 72 bp CTCCTGCACCGTCGGAAGGGTCAGAAGCAGGAGTGCTaGGCCGTCAATATCCTGCTCCTGAAATATCTTGGC +
Preference number: 6 (lower is better)
Translates to: LLHRRKGQKQEC*AVNILLLKYLG
Trigger: GCCAAGATATTTCAGGAGCAGGATATTGACGGCCAAGCACTCCTGCTTCTGACCCTTCCGACGGTGCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000683762.1
ENST00000684547.1
CDS CAA 72 bp TTGACATCACTCTCTACGTCCGGCGGCATCAACACCTaGTTGTTCTGTGTGCACCACCCCACGGGGTGCAAA +
Preference number: 6 (lower is better)
Translates to: LTSLSTSGGINT*LFCVHHPTGCK
Trigger: TTTGCACCCCGTGGGGTGGTGCACACAGAACAACAAGGTGTTGATGCCGCCGGACGTAGAGAGTGATGTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS CAA 90 bp TCTGTGTACTTCTCTTTGATTGCGTCCGGCGGCATCAACACCTTGTaGTTCTGTGTGCACCACCCCACGGGGTGCAAATCCGCGATGACT +
Preference number: 6 (lower is better)
Translates to: SVYFSLIASGGINTL*FCVHHPTGCKSAMT
Trigger: AGTCATCGCGGATTTGCACCCCGTGGGGTGGTGCACACAGAACAACAAGGTGTTGATGCCGCCGGACGCAATCAAAGAGAAGTACACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000379713.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
CDS GCA 72 bp GCACTCCTGCACCGTCGGAAGGGTCAGAAGCAGGAGTaGTTGGCCGTCAATATCCTGCTCCTGAAATATCTT +
Preference number: 6 (lower is better)
Translates to: ALLHRRKGQKQE*LAVNILLLKYL
Trigger: AAGATATTTCAGGAGCAGGATATTGACGGCCAAGCACTCCTGCTTCTGACCCTTCCGACGGTGCAGGAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000683762.1
ENST00000684547.1
CDS GCA 72 bp CCAACTGGTCGAAGTACCTTCCAGGAGGTTGGCGGGTaGTGTCCTCGAACCAGTCAAGTCACGTATGAGAAA +
Preference number: 6 (lower is better)
Translates to: PTGRSTFQEVGG*CPRTSQVTYEK
Trigger: TTTCTCATACGTGACTTGACTGGTTCGAGGACAGCACCCGCCAACCTCCTGGAAGGTACTTCGACCAGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682896.1
CDS CCA 72 bp AGCTTGGCACAGACTCGGCGGCAGAAATTTGCGACTTaGTCAGATGTCCGTACGATTTTGACCACAGCCCTG +
Preference number: 6 (lower is better)
Translates to: SLAQTRRQKFAT*SDVRTILTTAL
Trigger: CAGGGCTGTGGTCAAAATCGTACGGACATCTGACCAAGTCGCAAATTTCTGCCGCCGAGTCTGTGCCAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS CAA 72 bp TACTTCTCTTTGATTGCGTCCGGCGGCATCAACACCTaGTTGTTCTGTGTGCACCACCCCACGGGGTGCAAA +
Preference number: 6 (lower is better)
Translates to: YFSLIASGGINT*LFCVHHPTGCK
Trigger: TTTGCACCCCGTGGGGTGGTGCACACAGAACAACAAGGTGTTGATGCCGCCGGACGCAATCAAAGAGAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000379713.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
CDS TCA 72 bp CCACTGGGAAGATGTCCATGGATTCCACATCAACAATaGCCTCTGGAACAGGAGTCTGCAGCCCTTCCAGGT +
Preference number: 6 (lower is better)
Translates to: PLGRCPWIPHQQ*PLEQESAALPG
Trigger: ACCTGGAAGGGCTGCAGACTCCTGTTCCAGAGGTCATTGTTGATGTGGAATCCATGGACATCTTCCCAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000684547.1
CDS CAA 90 bp TGCCCGCACGTGGTAATGATCGTGGCCACCCAGTACGTGTCCGGGTaGTTCTTATTAGCCACTTCCAATTTCATTCCTGGCTGGAAGTTG +
Preference number: 6 (lower is better)
Translates to: CPHVVMIVATQYVSG*FLLATSNFIPGWKL
Trigger: CAACTTCCAGCCAGGAATGAAATTGGAAGTGGCTAATAAGAACAACCCGGACACGTACTGGGTGGCCACGATCATTACCACGTGCGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000361972.8
ENST00000379711.2
ENST00000379713.8
ENST00000397167.6
ENST00000673876.1
ENST00000682043.1
ENST00000682101.1
ENST00000682180.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS GCA 72 bp CCATTAGGGATTCTACGCAAGGTTCTCTCTGCTCCTTaGAAAATTACAGGCGTCATGAAGGATGGCGGCTCG +
Preference number: 6 (lower is better)
Translates to: PLGILRKVLSAP*KITGVMKDGGS
Trigger: CGAGCCGCCATCCTTCATGACGCCTGTAATTTTGCAAGGAGCAGAGAGAACCTTGCGTAGAATCCCTAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682043.1
CDS CCA 72 bp GAAGATGTCCATGGATTCCACATCAACAATGACCTCTaGAACAGGAGTCTGCAGCCCTTCCAGGTGAAGCCA +
Preference number: 6 (lower is better)
Translates to: EDVHGFHINNDL*NRSLQPFQVKP
Trigger: TGGCTTCACCTGGAAGGGCTGCAGACTCCTGTTCCAGAGGTCATTGTTGATGTGGAATCCATGGACATCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000684547.1
CDS CAA 90 bp ACTCGGCGGCAGAAATTTGCGACTTGGTCAGATGTCCGTACGATTTaGACCACAGCCCTGTATGTTTTGCCTCTGTATTTGGCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: TRRQKFATWSDVRTI*TTALYVLPLYLAFS
Trigger: GCTGAAGGCCAAATACAGAGGCAAAACATACAGGGCTGTGGTCAAAATCGTACGGACATCTGACCAAGTCGCAAATTTCTGCCGCCGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS CCA 72 bp CTTCACACTCACAACGGAGGCCACACACAGTTCTCCTaGATTCCTGGGGTTCACAGCTTCAAGTTTCATGTT +
Preference number: 6 (lower is better)
Translates to: LHTHNGGHTQFS*IPGVHSFKFHV
Trigger: AACATGAAACTTGAAGCTGTGAACCCCAGGAATCCAGGAGAACTGTGTGTGGCCTCCGTTGTGAGTGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000684547.1
CDS CAA 72 bp GTGGTAATGATCGTGGCCACCCAGTACGTGTCCGGGTaGTTCTTATTAGCCACTTCCAATTTCATTCCTGGC +
Preference number: 6 (lower is better)
Translates to: VVMIVATQYVSG*FLLATSNFIPG
Trigger: GCCAGGAATGAAATTGGAAGTGGCTAATAAGAACAACCCGGACACGTACTGGGTGGCCACGATCATTACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000361972.8
ENST00000379711.2
ENST00000379713.8
ENST00000397167.6
ENST00000673876.1
ENST00000682043.1
ENST00000682101.1
ENST00000682180.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS CAA 72 bp AGCACAGGACTAAACAAATTTGGACAGCACTCTAGCTaGGCACAGACTCGGCGGCAGAAATTTGCGACTTGG +
Preference number: 6 (lower is better)
Translates to: STGLNKFGQHSS*AQTRRQKFATW
Trigger: CCAAGTCGCAAATTTCTGCCGCCGAGTCTGTGCCAAGCTAGAGTGCTGTCCAAATTTGTTTAGTCCTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS CAA 90 bp GAGCCGAGACACTTTTCCAAGGGTGAAGATGAAGGGTCTTGCATATaGGAAGCTGACAAAGTGCTCTCCATGCCTGATGAGCAAGTGTCT +
Preference number: 6 (lower is better)
Translates to: EPRHFSKGEDEGSCI*EADKVLSMPDEQVS
Trigger: AGACACTTGCTCATCAGGCATGGAGAGCACTTTGTCAGCTTCCAATATGCAAGACCCTTCATCTTCACCCTTGGAAAAGTGTCTCGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000361972.8
ENST00000379711.2
ENST00000379713.8
ENST00000397167.6
ENST00000673876.1
ENST00000682043.1
ENST00000682101.1
ENST00000682180.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS GCA 72 bp CCGAGACACTTTTCCAAGGGTGAAGATGAAGGGTCTTaGATATTGGAAGCTGACAAAGTGCTCTCCATGCCT +
Preference number: 6 (lower is better)
Translates to: PRHFSKGEDEGS*ILEADKVLSMP
Trigger: AGGCATGGAGAGCACTTTGTCAGCTTCCAATATGCAAGACCCTTCATCTTCACCCTTGGAAAAGTGTCTCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000361972.8
ENST00000379711.2
ENST00000379713.8
ENST00000397167.6
ENST00000673876.1
ENST00000682043.1
ENST00000682101.1
ENST00000682180.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS GCA 72 bp AACAACAATACATACACCTTCCAGGAGGTTGGCGGGTaGTGTCCTCGAACCAGTCAAGTCACGTATGAGAAA +
Preference number: 6 (lower is better)
Translates to: NNNTYTFQEVGG*CPRTSQVTYEK
Trigger: TTTCTCATACGTGACTTGACTGGTTCGAGGACAGCACCCGCCAACCTCCTGGAAGGTGTATGTATTGTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379713.8
ENST00000682101.1
CDS CCA 72 bp AGACTGTTTTGTGTGGTGCAGTCAAAGGATAAGAATTaGCTTCACACCAGCCCACTGGGAAGATGTCCATGG +
Preference number: 6 (lower is better)
Translates to: RLFCVVQSKDKN*LHTSPLGRCPW
Trigger: CCATGGACATCTTCCCAGTGGGCTGGTGTGAAGCCAATTCTTATCCTTTGACTGCACCACACAAAACAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000684547.1
CDS CAA 90 bp TCAGATATCAGCACAGGACTAAACAAATTTGGACAGCACTCTAGCTaGGCACAGACTCGGCGGCAGAAATTTGCGACTTGGTCAGATGTC +
Preference number: 6 (lower is better)
Translates to: SDISTGLNKFGQHSS*AQTRRQKFATWSDV
Trigger: GACATCTGACCAAGTCGCAAATTTCTGCCGCCGAGTCTGTGCCAAGCTAGAGTGCTGTCCAAATTTGTTTAGTCCTGTGCTGATATCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS CAA 90 bp TGCACTAAGACCATTAGGGATTCTACGCAAGGTTCTCTCTGCTCCTaGCAAAATTACAGGCGTCATGAAGGATGGCGGCTCGTAAATCGA +
Preference number: 6 (lower is better)
Translates to: CTKTIRDSTQGSLCS*QNYRRHEGWRLVNR
Trigger: TCGATTTACGAGCCGCCATCCTTCATGACGCCTGTAATTTTGCAAGGAGCAGAGAGAACCTTGCGTAGAATCCCTAATGGTCTTAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682043.1
CDS TCA 72 bp TCTGCTGAAGGATATATGCAAAGGTGCTGTCAGGTCTaGGCTCACGTAACTGGGGTGCTTCAGAGATACATT +
Preference number: 6 (lower is better)
Translates to: SAEGYMQRCCQV*AHVTGVLQRYI
Trigger: AATGTATCTCTGAAGCACCCCAGTTACGTGAGCTCAGACCTGACAGCACCTTTGCATATATCCTTCAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379713.8
ENST00000682101.1
CDS GCA 72 bp AAGATGAAGGGTCTTGCATATTGGAAGCTGACAAAGTaGTCTCCATGCCTGATGAGCAAGTGTCTCTTCTCT +
Preference number: 6 (lower is better)
Translates to: KMKGLAYWKLTK*SPCLMSKCLFS
Trigger: AGAGAAGAGACACTTGCTCATCAGGCATGGAGAGCACTTTGTCAGCTTCCAATATGCAAGACCCTTCATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000361972.8
ENST00000379711.2
ENST00000379713.8
ENST00000397167.6
ENST00000673876.1
ENST00000682043.1
ENST00000682101.1
ENST00000682180.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS GCA 72 bp TTAACAGGCACTGTGGGCGGCAATTGTTTCTCTGGTTaGACGACTGCAATCTTTCTCTTCTTTTGTGAGACT +
Preference number: 6 (lower is better)
Translates to: LTGTVGGNCFSG*TTAIFLFFCET
Trigger: AGTCTCACAAAAGAAGAGAAAGATTGCAGTCGTGCAACCAGAGAAACAATTGCCGCCCACAGTGCCTGTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000684547.1
CDS GCA 72 bp ACTAAGACCATTAGGGATTCTACGCAAGGTTCTCTCTaGTCCTTGCAAAATTACAGGCGTCATGAAGGATGG +
Preference number: 6 (lower is better)
Translates to: TKTIRDSTQGSL*SLQNYRRHEGW
Trigger: CCATCCTTCATGACGCCTGTAATTTTGCAAGGAGCAGAGAGAACCTTGCGTAGAATCCCTAATGGTCTTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682043.1
CDS CCA 72 bp CACCACTGTACTGGCAAAATCCCCAAAGAATCTGCATaGCACAGCATTGACAGTTTACTTGGTTCAGGTCTT +
Preference number: 6 (lower is better)
Translates to: HHCTGKIPKESA*HSIDSLLGSGL
Trigger: AAGACCTGAACCAAGTAAACTGTCAATGCTGTGCCATGCAGATTCTTTGGGGATTTTGCCAGTACAGTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS TCA 72 bp TTTTCTAAGAAATATGTTGAACAGAAGCTGATGGCTTaGCATCACTCTCTACGTCCGGCGGCATCAACACCT +
Preference number: 6 (lower is better)
Translates to: FSKKYVEQKLMA*HHSLRPAASTP
Trigger: AGGTGTTGATGCCGCCGGACGTAGAGAGTGATGTCAAGCCATCAGCTTCTGTTCAACATATTTCTTAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS TCA 72 bp AGACATCCTTTTCTAAGAAATATGTTGAACAGAAGCTaGTGGCTTGACATCACTCTCTACGTCCGGCGGCAT +
Preference number: 6 (lower is better)
Translates to: RHPFLRNMLNRS*WLDITLYVRRH
Trigger: ATGCCGCCGGACGTAGAGAGTGATGTCAAGCCATCAGCTTCTGTTCAACATATTTCTTAGAAAAGGATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379711.2
CDS CAA 72 bp CAGAAATTTGCGACTTGGTCAGATGTCCGTACGATTTaGACCACAGCCCTGTATGTTTTGCCTCTGTATTTG +
Preference number: 6 (lower is better)
Translates to: QKFATWSDVRTI*TTALYVLPLYL
Trigger: CAAATACAGAGGCAAAACATACAGGGCTGTGGTCAAAATCGTACGGACATCTGACCAAGTCGCAAATTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS CAA 90 bp AGATACATTAGATGTATAACAACAATACATACACCTTCCAGGAGGTaGGCGGGTGCTGTCCTCGAACCAGTCAAGTCACGTATGAGAAAT +
Preference number: 6 (lower is better)
Translates to: RYIRCITTIHTPSRR*AGAVLEPVKSRMRN
Trigger: ATTTCTCATACGTGACTTGACTGGTTCGAGGACAGCACCCGCCAACCTCCTGGAAGGTGTATGTATTGTTGTTATACATCTAATGTATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379713.8
ENST00000682101.1
CDS TCA 72 bp TTCAGTAAATCACTCGATTACTCAGTGAATCTTTACTaGGAATTCCTCAAGCACAGGCAGCACGTGCTAGAG +
Preference number: 6 (lower is better)
Translates to: FSKSLDYSVNLY*EFLKHRQHVLE
Trigger: CTCTAGCACGTGCTGCCTGTGCTTGAGGAATTCTCAGTAAAGATTCACTGAGTAATCGAGTGATTTACTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682101.1
CDS CCA 72 bp GGTGTATTTGGTTTTGGTATGAATGGAGCAGTTCTCTaGGCAGTTTTCAGATATCAGCACAGGACTAAACAA +
Preference number: 6 (lower is better)
Translates to: GVFGFGMNGAVL*AVFRYQHRTKQ
Trigger: TTGTTTAGTCCTGTGCTGATATCTGAAAACTGCCCAGAGAACTGCTCCATTCATACCAAAACCAAATACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1
CDS TCA 72 bp CTTTTACCTTCTTCAGTAAATCACTCGATTACTCAGTaGATCTTTACTGAGAATTCCTCAAGCACAGGCAGC +
Preference number: 6 (lower is better)
Translates to: LLPSSVNHSITQ*IFTENSSSTGS
Trigger: GCTGCCTGTGCTTGAGGAATTCTCAGTAAAGATTCACTGAGTAATCGAGTGATTTACTGAAGAAGGTAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682101.1
CDS CCA 72 bp TTCCATAGTAATAGGTGTATTTGGTTTTGGTATGAATaGAGCAGTTCTCTGGGCAGTTTTCAGATATCAGCA +
Preference number: 6 (lower is better)
Translates to: FHSNRCIWFWYE*SSSLGSFQISA
Trigger: TGCTGATATCTGAAAACTGCCCAGAGAACTGCTCCATTCATACCAAAACCAAATACACCTATTACTATGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000361972.8
ENST00000397167.6
ENST00000673876.1
ENST00000682896.1
ENST00000683762.1
ENST00000684547.1