Pregenerated sensors for SF3B5 (Homo sapiens)
Ensembl gene IDs: ENSG00000169976Ensembl transcript IDs: ENST00000367569.4
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGGGCAAGCACTTCTGTACGCGGAAAGCACGAGGCGCAGGAGCCATaGAGAGCCGGTCCTTTGGAGACAGGAATACTTAAGAGGATTGGC | + |
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Preference number: 1 (lower is better) Translates to: RASTSVRGKHEAQEP*RAGPLETGILKRIG Trigger: GCCAATCCTCTTAAGTATTCCTGTCTCCAAAGGACCGGCTCTCCATGGCTCCTGCGCCTCGTGCTTTCCGCGTACAGAAGTGCTTGCCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| 3UTR GCA 90 bp | ATTAGCCAAAAACGAGACGCCAAATCCCATCTCACTCCAGCGCCATaGCCTCTTCTCAAACGCTCGCCGGCTCTAGGACCTCTCCACCAG | + |
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Preference number: 1 (lower is better) Translates to: ISQKRDAKSHLTPAP*PLLKRSPALGPLHQ Trigger: CTGGTGGAGAGGTCCTAGAGCCGGCGAGCGTTTGAGAAGAGGGCATGGCGCTGGAGTGAGATGGGATTTGGCGTCTCGTTTTTGGCTAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| 3UTR CCA 90 bp | TACGCGGAAAGCACGAGGCGCAGGAGCCATGGAGAGCCGGTCCTTTaGAGACAGGAATACTTAAGAGGATTGGCAAACCGGAGAAACGCT | + |
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Preference number: 1 (lower is better) Translates to: YAESTRRRSHGEPVL*RQEYLRGLANRRNA Trigger: AGCGTTTCTCCGGTTTGCCAATCCTCTTAAGTATTCCTGTCTCCAAAGGACCGGCTCTCCATGGCTCCTGCGCCTCGTGCTTTCCGCGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| 3UTR-3UTR CCA 90 bp | CAGTGCTGTTCTAAGGGTCCACATGAAGGCAGGTCAGGCGGGACTCCCCGGGCAGAGGCGCAGGAGCCATaGAGAGCCGGTCCTTTGGAG | + |
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Preference number: 2 (lower is better) Translates to: QCCSKGPHEGRSGGTPRAEAQEP*RAGPLE Trigger: CTCCAAAGGACCGGCTCTCCATGGCTCCTGCGCCTC...TGCCCGGGGAGTCCCGCCTGACCTGCCTTCATGTGGACCCTTAGAACAGCACTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| 3UTR CAA 90 bp | AGCCATGGAGAGCCGGTCCTTTGGAGACAGGAATACTTAAGAGGATaGGCAAACCGGAGAAACGCTGGGAGAGGTGCCCCGCACTGCGGT | + |
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Preference number: 2 (lower is better) Translates to: SHGEPVLWRQEYLRG*ANRRNAGRGAPHCG Trigger: ACCGCAGTGCGGGGCACCTCTCCCAGCGTTTCTCCGGTTTGCCAATCCTCTTAAGTATTCCTGTCTCCAAAGGACCGGCTCTCCATGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| 3UTR CAA 90 bp | GTACGCGGAAAGCACGAGGCGCAGGAGCCATGGAGAGCCGGTCCTTaGGAGACAGGAATACTTAAGAGGATTGGCAAACCGGAGAAACGC | + |
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Preference number: 2 (lower is better) Translates to: VRGKHEAQEPWRAGP*ETGILKRIGKPEKR Trigger: GCGTTTCTCCGGTTTGCCAATCCTCTTAAGTATTCCTGTCTCCAAAGGACCGGCTCTCCATGGCTCCTGCGCCTCGTGCTTTCCGCGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| 3UTR-3UTR CCA 90 bp | GCTGTTCTAAGGGTCCACATGAAGGCAGGTCAGGCGGGACTCCCCGGGCAAGCAGGAGAGCCGGTCCTTTaGAGACAGGAATACTTAAGA | + |
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Preference number: 2 (lower is better) Translates to: AVLRVHMKAGQAGLPGQAGEPVL*RQEYLR Trigger: TCTTAAGTATTCCTGTCTCCAAAGGACCGGCTCTCC...TGCTTGCCCGGGGAGTCCCGCCTGACCTGCCTTCATGTGGACCCTTAGAACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| 3UTR GCA 72 bp | CCAGCACAGTTCTCAGGAGTCCTGCTGGTCTCCCAGTaGTGTTCTAAGGGTCCACATGAAGGCAGGTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: PAQFSGVLLVSQ*CSKGPHEGRSG Trigger: GCCTGACCTGCCTTCATGTGGACCCTTAGAACAGCACTGGGAGACCAGCAGGACTCCTGAGAACTGTGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| 3UTR CCA 72 bp | AGCACGAGGCGCAGGAGCCATGGAGAGCCGGTCCTTTaGAGACAGGAATACTTAAGAGGATTGGCAAACCGG | + |
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Preference number: 3 (lower is better) Translates to: STRRRSHGEPVL*RQEYLRGLANR Trigger: CCGGTTTGCCAATCCTCTTAAGTATTCCTGTCTCCAAAGGACCGGCTCTCCATGGCTCCTGCGCCTCGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| 3UTR-3UTR CAA 90 bp | GCAAGCACTTCTGTACGCGGAAAGCACGAGGCGCAGGAGCCATGGAGAGCCGGTGAATACTTAAGAGGATaGGCAAACCGGAGAAACGCT | + |
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Preference number: 3 (lower is better) Translates to: ASTSVRGKHEAQEPWRAGEYLRG*ANRRNA Trigger: AGCGTTTCTCCGGTTTGCCAATCCTCTTAAGTATTC...ACCGGCTCTCCATGGCTCCTGCGCCTCGTGCTTTCCGCGTACAGAAGTGCTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| 3UTR CCA 72 bp | ACTTCTGTACGCGGAAAGCACGAGGCGCAGGAGCCATaGAGAGCCGGTCCTTTGGAGACAGGAATACTTAAG | + |
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Preference number: 3 (lower is better) Translates to: TSVRGKHEAQEP*RAGPLETGILK Trigger: CTTAAGTATTCCTGTCTCCAAAGGACCGGCTCTCCATGGCTCCTGCGCCTCGTGCTTTCCGCGTACAGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR CCA 90 bp | CCGGGCAAGCACTTCTGTACGCGGAAAGCACGAGGCGCAGGAGCCATGGAGAGCCCAGCCACTCCCACTTaGTGGTGTCGGCGTGGCCCG | + |
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Preference number: 4 (lower is better) Translates to: PGKHFCTRKARGAGAMESPATPT*WCRRGP Trigger: CGGGCCACGCCGACACCACCAAGTGGGAGTGGCTGG...GCTCTCCATGGCTCCTGCGCCTCGTGCTTTCCGCGTACAGAAGTGCTTGCCCGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR GCA 90 bp | GGGACTCCCCGGGCAAGCACTTCTGTACGCGGAAAGCACGAGGCGCAGGAGCCACTCACTCCAGCGCCATaGCCTCTTCTCAAACGCTCG | + |
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Preference number: 4 (lower is better) Translates to: GTPRASTSVRGKHEAQEPLTPAP*PLLKRS Trigger: CGAGCGTTTGAGAAGAGGGCATGGCGCTGGAGTGAG...TGGCTCCTGCGCCTCGTGCTTTCCGCGTACAGAAGTGCTTGCCCGGGGAGTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR CCA 90 bp | GGATTGGCAAACCGGAGAAACGCTGGGAGAGGTGCCCCGCACTGCGGTGGTAAGCTCGGGCTTGTCGGCTaGCGGTCCACAAGGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: GLANRRNAGRGAPHCGGKLGLVG*RSTRLK Trigger: CTTCAGCCTTGTGGACCGCCAGCCGACAAGCCCGAG...CTTACCACCGCAGTGCGGGGCACCTCTCCCAGCGTTTCTCCGGTTTGCCAATCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR CCA 90 bp | GCAAGCACTTCTGTACGCGGAAAGCACGAGGCGCAGGAGCCATGGAGAGCCGGTTTGGTGGTGTCGGCGTaGCCCGTGCCGATGTACTTG | + |
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Preference number: 4 (lower is better) Translates to: ASTSVRGKHEAQEPWRAGLVVSA*PVPMYL Trigger: CAAGTACATCGGCACGGGCCACGCCGACACCACCAA...ACCGGCTCTCCATGGCTCCTGCGCCTCGTGCTTTCCGCGTACAGAAGTGCTTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR CCA 90 bp | GCGGAAAGCACGAGGCGCAGGAGCCATGGAGAGCCGGTCCTTTGGAGACAGGAAAAACCGGAGAAACGCTaGGAGAGGTGCCCCGCACTG | + |
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Preference number: 4 (lower is better) Translates to: AESTRRRSHGEPVLWRQEKPEKR*ERCPAL Trigger: CAGTGCGGGGCACCTCTCCCAGCGTTTCTCCGGTTT...TTCCTGTCTCCAAAGGACCGGCTCTCCATGGCTCCTGCGCCTCGTGCTTTCCGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR GCA 90 bp | TGCCCTCTTCTCAAACGCTCGCCGGCTCTAGGACCTCTCCACCAGCACAGTTCTTGTCGGCGTGGCCCGTaGCGATGTACTTGGACTGCA | + |
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Preference number: 4 (lower is better) Translates to: CPLLKRSPALGPLHQHSSCRRGP*RCTWTA Trigger: TGCAGTCCAAGTACATCGGCACGGGCCACGCCGACA...AGAACTGTGCTGGTGGAGAGGTCCTAGAGCCGGCGAGCGTTTGAGAAGAGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR GCA 90 bp | TGCCCTCTTCTCAAACGCTCGCCGGCTCTAGGACCTCTCCACCAGCACAGTTCTAGAGGTGCCCCGCACTaGGGTGGTAAGGCAGAGTCT | + |
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Preference number: 4 (lower is better) Translates to: CPLLKRSPALGPLHQHSSRGAPH*GGKAES Trigger: AGACTCTGCCTTACCACCGCAGTGCGGGGCACCTCT...AGAACTGTGCTGGTGGAGAGGTCCTAGAGCCGGCGAGCGTTTGAGAAGAGGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR GCA 90 bp | GGATTGGCAAACCGGAGAAACGCTGGGAGAGGTGCCCCGCACTGCGGTGGTAAGCTGCTGGTCTCCCAGTaGTGTTCTAAGGGTCCACAT | + |
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Preference number: 4 (lower is better) Translates to: GLANRRNAGRGAPHCGGKLLVSQ*CSKGPH Trigger: ATGTGGACCCTTAGAACAGCACTGGGAGACCAGCAG...CTTACCACCGCAGTGCGGGGCACCTCTCCCAGCGTTTCTCCGGTTTGCCAATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR CCA 90 bp | GGATTGGCAAACCGGAGAAACGCTGGGAGAGGTGCCCCGCACTGCGGTGGTAAGCCAGCTGGCTATGGATaGTGTAGCGGTCAGTCATCT | + |
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Preference number: 4 (lower is better) Translates to: GLANRRNAGRGAPHCGGKPAGYG*CSGQSS Trigger: AGATGACTGACCGCTACACCATCCATAGCCAGCTGG...CTTACCACCGCAGTGCGGGGCACCTCTCCCAGCGTTTCTCCGGTTTGCCAATCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR CCA 90 bp | CCATGGAGAGCCGGTCCTTTGGAGACAGGAATACTTAAGAGGATTGGCAAACCGGCCACTCCCACTTGGTaGTGTCGGCGTGGCCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: PWRAGPLETGILKRIGKPATPTW*CRRGPC Trigger: GCACGGGCCACGCCGACACCACCAAGTGGGAGTGGC...CGGTTTGCCAATCCTCTTAAGTATTCCTGTCTCCAAAGGACCGGCTCTCCATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR CCA 90 bp | GCGGAAAGCACGAGGCGCAGGAGCCATGGAGAGCCGGTCCTTTGGAGACAGGAATCTCAGGAGTCCTGCTaGTCTCCCAGTGCTGTTCTA | + |
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Preference number: 4 (lower is better) Translates to: AESTRRRSHGEPVLWRQESQESC*SPSAVL Trigger: TAGAACAGCACTGGGAGACCAGCAGGACTCCTGAGA...TTCCTGTCTCCAAAGGACCGGCTCTCCATGGCTCCTGCGCCTCGTGCTTTCCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR GCA 90 bp | GCTCTAGGACCTCTCCACCAGCACAGTTCTCAGGAGTCCTGCTGGTCTCCCAGTCCGATGTACTTGGACTaGAGGTGCTCCAGCTGGCTA | + |
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Preference number: 4 (lower is better) Translates to: ALGPLHQHSSQESCWSPSPMYLD*RCSSWL Trigger: TAGCCAGCTGGAGCACCTGCAGTCCAAGTACATCGG...ACTGGGAGACCAGCAGGACTCCTGAGAACTGTGCTGGTGGAGAGGTCCTAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR CCA 90 bp | GGAGTCCTGCTGGTCTCCCAGTGCTGTTCTAAGGGTCCACATGAAGGCAGGTCATACGAGTCGCGGTGTTaGTTCACCAGCCACTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: GVLLVSQCCSKGPHEGRSYESRC*FTSHSH Trigger: GTGGGAGTGGCTGGTGAACCAACACCGCGACTCGTA...TGACCTGCCTTCATGTGGACCCTTAGAACAGCACTGGGAGACCAGCAGGACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR CCA 90 bp | CAGGAGCCATGGAGAGCCGGTCCTTTGGAGACAGGAATACTTAAGAGGATTGGCGAGGCGCAGGAGCCATaGAGAGCCGGTCCTTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: QEPWRAGPLETGILKRIGEAQEP*RAGPLE Trigger: CTCCAAAGGACCGGCTCTCCATGGCTCCTGCGCCTC...GCCAATCCTCTTAAGTATTCCTGTCTCCAAAGGACCGGCTCTCCATGGCTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR GCA 90 bp | TGCTGGTCTCCCAGTGCTGTTCTAAGGGTCCACATGAAGGCAGGTCAGGCGGGATACTTGGACTGCAGGTaGTCCAGCTGGCTATGGATG | + |
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Preference number: 4 (lower is better) Translates to: CWSPSAVLRVHMKAGQAGYLDCR*SSWLWM Trigger: CATCCATAGCCAGCTGGAGCACCTGCAGTCCAAGTA...TCCCGCCTGACCTGCCTTCATGTGGACCCTTAGAACAGCACTGGGAGACCAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| 3UTR CAA 72 bp | GAGCCGGTCCTTTGGAGACAGGAATACTTAAGAGGATaGGCAAACCGGAGAAACGCTGGGAGAGGTGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: EPVLWRQEYLRG*ANRRNAGRGAP Trigger: CGGGGCACCTCTCCCAGCGTTTCTCCGGTTTGCCAATCCTCTTAAGTATTCCTGTCTCCAAAGGACCGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR TCA 90 bp | TCTTCTCAAACGCTCGCCGGCTCTAGGACCTCTCCACCAGCACAGTTCTCAGGACAATGGCGAAGTAGTTaGGAAGGTCGAAGTGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: SSQTLAGSRTSPPAQFSGQWRSS*EGRSGP Trigger: TGGGCCACTTCGACCTTCTCAACTACTTCGCCATTG...TCCTGAGAACTGTGCTGGTGGAGAGGTCCTAGAGCCGGCGAGCGTTTGAGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR TCA 90 bp | TGCCCTCTTCTCAAACGCTCGCCGGCTCTAGGACCTCTCCACCAGCACAGTTCTTCTTTTCCATCAAGTTaGAGCGGACTCGCGCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: CPLLKRSPALGPLHQHSSSFPSS*SGLALC Trigger: GCAAAGCGCGAGTCCGCTTCAACTTGATGGAAAAGA...AGAACTGTGCTGGTGGAGAGGTCCTAGAGCCGGCGAGCGTTTGAGAAGAGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR TCA 90 bp | GGAGTCCTGCTGGTCTCCCAGTGCTGTTCTAAGGGTCCACATGAAGGCAGGTCAGGCGGTCCACAAGGCTaGAGCATCTTTTCCATCAAG | + |
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Preference number: 4 (lower is better) Translates to: GVLLVSQCCSKGPHEGRSGGPQG*SIFSIK Trigger: CTTGATGGAAAAGATGCTTCAGCCTTGTGGACCGCC...TGACCTGCCTTCATGTGGACCCTTAGAACAGCACTGGGAGACCAGCAGGACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR CCA 90 bp | CAGGAGCCATGGAGAGCCGGTCCTTTGGAGACAGGAATACTTAAGAGGATTGGCCCGTGCCGATGTACTTaGACTGCAGGTGCTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: QEPWRAGPLETGILKRIGPCRCT*TAGAPA Trigger: AGCTGGAGCACCTGCAGTCCAAGTACATCGGCACGG...GCCAATCCTCTTAAGTATTCCTGTCTCCAAAGGACCGGCTCTCCATGGCTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR GCA 90 bp | CAGGAGCCATGGAGAGCCGGTCCTTTGGAGACAGGAATACTTAAGAGGATTGGCAGCGGACTCGCGCTTTaGTCTCATTCTCCGCAATGG | + |
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Preference number: 4 (lower is better) Translates to: QEPWRAGPLETGILKRIGSGLAL*SHSPQW Trigger: CCATTGCGGAGAATGAGAGCAAAGCGCGAGTCCGCT...GCCAATCCTCTTAAGTATTCCTGTCTCCAAAGGACCGGCTCTCCATGGCTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR GCA 90 bp | CAGGAGCCATGGAGAGCCGGTCCTTTGGAGACAGGAATACTTAAGAGGATTGGCAGTTCTCAGGAGTCCTaGTGGTCTCCCAGTGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: QEPWRAGPLETGILKRIGSSQES*WSPSAV Trigger: AACAGCACTGGGAGACCAGCAGGACTCCTGAGAACT...GCCAATCCTCTTAAGTATTCCTGTCTCCAAAGGACCGGCTCTCCATGGCTCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR CCA 90 bp | TCTCAGGAGTCCTGCTGGTCTCCCAGTGCTGTTCTAAGGGTCCACATGAAGGCAGGAGAGCCGGTCCTTTaGAGACAGGAATACTTAAGA | + |
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Preference number: 4 (lower is better) Translates to: SQESCWSPSAVLRVHMKAGEPVL*RQEYLR Trigger: TCTTAAGTATTCCTGTCTCCAAAGGACCGGCTCTCC...TGCCTTCATGTGGACCCTTAGAACAGCACTGGGAGACCAGCAGGACTCCTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS CCA 90 bp | GCCACTCCCACTTGGTGGTGTCGGCGTGGCCCGTGCCGATGTACTTaGACTGCAGGTGCTCCAGCTGGCTATGGATGGTGTAGCGGTCAG | + |
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Preference number: 5 (lower is better) Translates to: ATPTWWCRRGPCRCT*TAGAPAGYGWCSGQ Trigger: CTGACCGCTACACCATCCATAGCCAGCTGGAGCACCTGCAGTCCAAGTACATCGGCACGGGCCACGCCGACACCACCAAGTGGGAGTGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS CCA 90 bp | TCGCGGTGTTGGTTCACCAGCCACTCCCACTTGGTGGTGTCGGCGTaGCCCGTGCCGATGTACTTGGACTGCAGGTGCTCCAGCTGGCTA | + |
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Preference number: 5 (lower is better) Translates to: SRCWFTSHSHLVVSA*PVPMYLDCRCSSWL Trigger: TAGCCAGCTGGAGCACCTGCAGTCCAAGTACATCGGCACGGGCCACGCCGACACCACCAAGTGGGAGTGGCTGGTGAACCAACACCGCGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR CAA 90 bp | GCTGTTCTAAGGGTCCACATGAAGGCAGGTCAGGCGGGACTCCCCGGGCAAGCACCCGTGCCGATGTACTaGGACTGCAGGTGCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: AVLRVHMKAGQAGLPGQAPVPMY*DCRCSS Trigger: GCTGGAGCACCTGCAGTCCAAGTACATCGGCACGGG...TGCTTGCCCGGGGAGTCCCGCCTGACCTGCCTTCATGTGGACCCTTAGAACAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR CAA 90 bp | GCTCTAGGACCTCTCCACCAGCACAGTTCTCAGGAGTCCTGCTGGTCTCCCAGTACCAGCCACTCCCACTaGGTGGTGTCGGCGTGGCCC | + |
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Preference number: 5 (lower is better) Translates to: ALGPLHQHSSQESCWSPSTSHSH*VVSAWP Trigger: GGGCCACGCCGACACCACCAAGTGGGAGTGGCTGGT...ACTGGGAGACCAGCAGGACTCCTGAGAACTGTGCTGGTGGAGAGGTCCTAGAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR CAA 90 bp | GGATTGGCAAACCGGAGAAACGCTGGGAGAGGTGCCCCGCACTGCGGTGGTAAGCAGTTCTCCTCGGGCTaGTCGGCTGGCGGTCCACAA | + |
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Preference number: 5 (lower is better) Translates to: GLANRRNAGRGAPHCGGKQFSSG*SAGGPQ Trigger: TTGTGGACCGCCAGCCGACAAGCCCGAGGAGAACTG...CTTACCACCGCAGTGCGGGGCACCTCTCCCAGCGTTTCTCCGGTTTGCCAATCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS GCA 90 bp | GTTGGTTCACCAGCCACTCCCACTTGGTGGTGTCGGCGTGGCCCGTaGCGATGTACTTGGACTGCAGGTGCTCCAGCTGGCTATGGATGG | + |
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Preference number: 5 (lower is better) Translates to: VGSPATPTWWCRRGP*RCTWTAGAPAGYGW Trigger: CCATCCATAGCCAGCTGGAGCACCTGCAGTCCAAGTACATCGGCACGGGCCACGCCGACACCACCAAGTGGGAGTGGCTGGTGAACCAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS CCA 90 bp | AGCAGTACGAGTCGCGGTGTTGGTTCACCAGCCACTCCCACTTGGTaGTGTCGGCGTGGCCCGTGCCGATGTACTTGGACTGCAGGTGCT | + |
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Preference number: 5 (lower is better) Translates to: SSTSRGVGSPATPTW*CRRGPCRCTWTAGA Trigger: AGCACCTGCAGTCCAAGTACATCGGCACGGGCCACGCCGACACCACCAAGTGGGAGTGGCTGGTGAACCAACACCGCGACTCGTACTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS CCA 90 bp | AGGAGCAGTACGAGTCGCGGTGTTGGTTCACCAGCCACTCCCACTTaGTGGTGTCGGCGTGGCCCGTGCCGATGTACTTGGACTGCAGGT | + |
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Preference number: 5 (lower is better) Translates to: RSSTSRGVGSPATPT*WCRRGPCRCTWTAG Trigger: ACCTGCAGTCCAAGTACATCGGCACGGGCCACGCCGACACCACCAAGTGGGAGTGGCTGGTGAACCAACACCGCGACTCGTACTGCTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR CAA 90 bp | GGATTGGCAAACCGGAGAAACGCTGGGAGAGGTGCCCCGCACTGCGGTGGTAAGGTACGAGTCGCGGTGTaGGTTCACCAGCCACTCCCA | + |
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Preference number: 5 (lower is better) Translates to: GLANRRNAGRGAPHCGGKVRVAV*VHQPLP Trigger: TGGGAGTGGCTGGTGAACCAACACCGCGACTCGTAC...CTTACCACCGCAGTGCGGGGCACCTCTCCCAGCGTTTCTCCGGTTTGCCAATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS GCA 90 bp | AGAGGATTGGCAAACCGGAGAAACGCTGGGAGAGGTGCCCCGCACTaGGGTGGTAAGGCAGAGTCTCAGTTCTCCTCGGGCTTGTCGGCT | + |
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Preference number: 5 (lower is better) Translates to: RGLANRRNAGRGAPH*GGKAESQFSSGLSA Trigger: AGCCGACAAGCCCGAGGAGAACTGAGACTCTGCCTTACCACCGCAGTGCGGGGCACCTCTCCCAGCGTTTCTCCGGTTTGCCAATCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS CCA 90 bp | CCGTGCCGATGTACTTGGACTGCAGGTGCTCCAGCTGGCTATGGATaGTGTAGCGGTCAGTCATCTCGCCGCTTTCCCCTTCGCTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: PCRCTWTAGAPAGYG*CSGQSSRRFPLRSQ Trigger: CTGAGAGCGAAGGGGAAAGCGGCGAGATGACTGACCGCTACACCATCCATAGCCAGCTGGAGCACCTGCAGTCCAAGTACATCGGCACGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR CAA 90 bp | CTTCTGTACGCGGAAAGCACGAGGCGCAGGAGCCATGGAGAGCCGGTCCTTTGGAAGCGGACTCGCGCTTaGCTCTCATTCTCCGCAATG | + |
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Preference number: 5 (lower is better) Translates to: LLYAESTRRRSHGEPVLWKRTRA*LSFSAM Trigger: CATTGCGGAGAATGAGAGCAAAGCGCGAGTCCGCTT...CCAAAGGACCGGCTCTCCATGGCTCCTGCGCCTCGTGCTTTCCGCGTACAGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS TCA 90 bp | AGCGGACTCGCGCTTTGCTCTCATTCTCCGCAATGGCGAAGTAGTTaGGAAGGTCGAAGTGGCCCATGTAGGAGCAGTACGAGTCGCGGT | + |
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Preference number: 5 (lower is better) Translates to: SGLALCSHSPQWRSS*EGRSGPCRSSTSRG Trigger: ACCGCGACTCGTACTGCTCCTACATGGGCCACTTCGACCTTCTCAACTACTTCGCCATTGCGGAGAATGAGAGCAAAGCGCGAGTCCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS TCA 90 bp | GAGTCTCAGTTCTCCTCGGGCTTGTCGGCTGGCGGTCCACAAGGCTaGAGCATCTTTTCCATCAAGTTGAAGCGGACTCGCGCTTTGCTC | + |
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Preference number: 5 (lower is better) Translates to: ESQFSSGLSAGGPQG*SIFSIKLKRTRALL Trigger: GAGCAAAGCGCGAGTCCGCTTCAACTTGATGGAAAAGATGCTTCAGCCTTGTGGACCGCCAGCCGACAAGCCCGAGGAGAACTGAGACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR CAA 90 bp | CAAACCGGAGAAACGCTGGGAGAGGTGCCCCGCACTGCGGTGGTAAGGCAGAGTGAATACTTAAGAGGATaGGCAAACCGGAGAAACGCT | + |
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Preference number: 5 (lower is better) Translates to: QTGETLGEVPRTAVVRQSEYLRG*ANRRNA Trigger: AGCGTTTCTCCGGTTTGCCAATCCTCTTAAGTATTC...ACTCTGCCTTACCACCGCAGTGCGGGGCACCTCTCCCAGCGTTTCTCCGGTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS TCA 90 bp | TGTCGGCTGGCGGTCCACAAGGCTGAAGCATCTTTTCCATCAAGTTaGAGCGGACTCGCGCTTTGCTCTCATTCTCCGCAATGGCGAAGT | + |
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Preference number: 5 (lower is better) Translates to: CRLAVHKAEASFPSS*SGLALCSHSPQWRS Trigger: ACTTCGCCATTGCGGAGAATGAGAGCAAAGCGCGAGTCCGCTTCAACTTGATGGAAAAGATGCTTCAGCCTTGTGGACCGCCAGCCGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR CAA 90 bp | ACGAGGCGCAGGAGCCATGGAGAGCCGGTCCTTTGGAGACAGGAATACTTAAGATGGAGAGCCGGTCCTTaGGAGACAGGAATACTTAAG | + |
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Preference number: 5 (lower is better) Translates to: TRRRSHGEPVLWRQEYLRWRAGP*ETGILK Trigger: CTTAAGTATTCCTGTCTCCAAAGGACCGGCTCTCCA...TCTTAAGTATTCCTGTCTCCAAAGGACCGGCTCTCCATGGCTCCTGCGCCTCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS-3UTR CAA 90 bp | CCATGGAGAGCCGGTCCTTTGGAGACAGGAATACTTAAGAGGATTGGCAAACCGATCTTTTCCATCAAGTaGAAGCGGACTCGCGCTTTG | + |
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Preference number: 5 (lower is better) Translates to: PWRAGPLETGILKRIGKPIFSIK*KRTRAL Trigger: CAAAGCGCGAGTCCGCTTCAACTTGATGGAAAAGAT...CGGTTTGCCAATCCTCTTAAGTATTCCTGTCTCCAAAGGACCGGCTCTCCATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS GCA 72 bp | CCAGCCACTCCCACTTGGTGGTGTCGGCGTGGCCCGTaGCGATGTACTTGGACTGCAGGTGCTCCAGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: PATPTWWCRRGP*RCTWTAGAPAG Trigger: GCCAGCTGGAGCACCTGCAGTCCAAGTACATCGGCACGGGCCACGCCGACACCACCAAGTGGGAGTGGCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS GCA 72 bp | GCAAACCGGAGAAACGCTGGGAGAGGTGCCCCGCACTaGGGTGGTAAGGCAGAGTCTCAGTTCTCCTCGGGC | + |
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Preference number: 6 (lower is better) Translates to: ANRRNAGRGAPH*GGKAESQFSSG Trigger: GCCCGAGGAGAACTGAGACTCTGCCTTACCACCGCAGTGCGGGGCACCTCTCCCAGCGTTTCTCCGGTTTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS CCA 72 bp | TGGTTCACCAGCCACTCCCACTTGGTGGTGTCGGCGTaGCCCGTGCCGATGTACTTGGACTGCAGGTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: WFTSHSHLVVSA*PVPMYLDCRCS Trigger: GGAGCACCTGCAGTCCAAGTACATCGGCACGGGCCACGCCGACACCACCAAGTGGGAGTGGCTGGTGAACCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS CCA 72 bp | ACGAGTCGCGGTGTTGGTTCACCAGCCACTCCCACTTaGTGGTGTCGGCGTGGCCCGTGCCGATGTACTTGG | + |
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Preference number: 6 (lower is better) Translates to: TSRGVGSPATPT*WCRRGPCRCTW Trigger: CCAAGTACATCGGCACGGGCCACGCCGACACCACCAAGTGGGAGTGGCTGGTGAACCAACACCGCGACTCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS CAA 90 bp | GAGAAGGTCGAAGTGGCCCATGTAGGAGCAGTACGAGTCGCGGTGTaGGTTCACCAGCCACTCCCACTTGGTGGTGTCGGCGTGGCCCGT | + |
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Preference number: 6 (lower is better) Translates to: EKVEVAHVGAVRVAV*VHQPLPLGGVGVAR Trigger: ACGGGCCACGCCGACACCACCAAGTGGGAGTGGCTGGTGAACCAACACCGCGACTCGTACTGCTCCTACATGGGCCACTTCGACCTTCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS CCA 72 bp | AGTCGCGGTGTTGGTTCACCAGCCACTCCCACTTGGTaGTGTCGGCGTGGCCCGTGCCGATGTACTTGGACT | + |
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Preference number: 6 (lower is better) Translates to: SRGVGSPATPTW*CRRGPCRCTWT Trigger: AGTCCAAGTACATCGGCACGGGCCACGCCGACACCACCAAGTGGGAGTGGCTGGTGAACCAACACCGCGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS CAA 72 bp | CACTTGGTGGTGTCGGCGTGGCCCGTGCCGATGTACTaGGACTGCAGGTGCTCCAGCTGGCTATGGATGGTG | + |
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Preference number: 6 (lower is better) Translates to: HLVVSAWPVPMY*DCRCSSWLWMV Trigger: CACCATCCATAGCCAGCTGGAGCACCTGCAGTCCAAGTACATCGGCACGGGCCACGCCGACACCACCAAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS CAA 72 bp | TACGAGTCGCGGTGTTGGTTCACCAGCCACTCCCACTaGGTGGTGTCGGCGTGGCCCGTGCCGATGTACTTG | + |
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Preference number: 6 (lower is better) Translates to: YESRCWFTSHSH*VVSAWPVPMYL Trigger: CAAGTACATCGGCACGGGCCACGCCGACACCACCAAGTGGGAGTGGCTGGTGAACCAACACCGCGACTCGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS CCA 72 bp | ACTTGGTGGTGTCGGCGTGGCCCGTGCCGATGTACTTaGACTGCAGGTGCTCCAGCTGGCTATGGATGGTGT | + |
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Preference number: 6 (lower is better) Translates to: TWWCRRGPCRCT*TAGAPAGYGWC Trigger: ACACCATCCATAGCCAGCTGGAGCACCTGCAGTCCAAGTACATCGGCACGGGCCACGCCGACACCACCAAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS CAA 72 bp | GAAGTGGCCCATGTAGGAGCAGTACGAGTCGCGGTGTaGGTTCACCAGCCACTCCCACTTGGTGGTGTCGGC | + |
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Preference number: 6 (lower is better) Translates to: EVAHVGAVRVAV*VHQPLPLGGVG Trigger: GCCGACACCACCAAGTGGGAGTGGCTGGTGAACCAACACCGCGACTCGTACTGCTCCTACATGGGCCACTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS CCA 72 bp | TGTACTTGGACTGCAGGTGCTCCAGCTGGCTATGGATaGTGTAGCGGTCAGTCATCTCGCCGCTTTCCCCTT | + |
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Preference number: 6 (lower is better) Translates to: CTWTAGAPAGYG*CSGQSSRRFPL Trigger: AAGGGGAAAGCGGCGAGATGACTGACCGCTACACCATCCATAGCCAGCTGGAGCACCTGCAGTCCAAGTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS TCA 72 bp | GCGCTTTGCTCTCATTCTCCGCAATGGCGAAGTAGTTaGGAAGGTCGAAGTGGCCCATGTAGGAGCAGTACG | + |
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Preference number: 6 (lower is better) Translates to: ALCSHSPQWRSS*EGRSGPCRSST Trigger: CGTACTGCTCCTACATGGGCCACTTCGACCTTCTCAACTACTTCGCCATTGCGGAGAATGAGAGCAAAGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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| CDS TCA 72 bp | GCGGTCCACAAGGCTGAAGCATCTTTTCCATCAAGTTaGAGCGGACTCGCGCTTTGCTCTCATTCTCCGCAA | + |
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Preference number: 6 (lower is better) Translates to: AVHKAEASFPSS*SGLALCSHSPQ Trigger: TTGCGGAGAATGAGAGCAAAGCGCGAGTCCGCTTCAACTTGATGGAAAAGATGCTTCAGCCTTGTGGACCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000367569.4 |
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