Pregenerated sensors for SERPINB10 (Homo sapiens)
Ensembl gene IDs: ENSG00000242550Ensembl transcript IDs: ENST00000238508.8, ENST00000397996.6, ENST00000418725.1, ENST00000619595.1
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GTACAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAATGGAGTGCACTGGTGTaGTCTTGGCTCACTGCAGTC | + |
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Preference number: 2 (lower is better) Translates to: VQFPQVITSYMTTVHLSKWSALV*SWLTAV Trigger: GACTGCAGTGAGCCAAGATCACACCAGTGCACTCCA...TTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTGTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAACTATTGCCCAGGTTGGAGTaGACTGGTGTGATCTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: QFPQVITSYMTTVHLSKLLPRLE*TGVILA Trigger: AGCCAAGATCACACCAGTGCACTCCAACCTGGGCAA...TAGTTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAACTAAGGTGTGCACCACCATaGCGGGCTAAATTTTTGATC | + |
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Preference number: 2 (lower is better) Translates to: QFPQVITSYMTTVHLSKLRCAPP*RAKFLI Trigger: GATCAAAAATTTAGCCCGGCATGGTGGTGCACACCT...TAGTTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAACTATTTCACACTGTAAGATaGTCTTGTTTGTTGAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: QFPQVITSYMTTVHLSKLFHTVR*SCLLRD Trigger: ATCTCTCAACAAACAAGACCATCTTACAGTGTGAAA...TAGTTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| 3UTR-3UTR CAA 90 bp | CAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAACTATGCACTGGTGTGATCTaGGCTCACTGCAGTCTCAAC | + |
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Preference number: 3 (lower is better) Translates to: QFPQVITSYMTTVHLSKLCTGVI*AHCSLN Trigger: GTTGAGACTGCAGTGAGCCAAGATCACACCAGTGCA...TAGTTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| 3UTR-3UTR CAA 90 bp | TGTGCACCACCATGCCGGGCTAAATTTTTGATCAAAACGATATTCTTGAGAAACGTAAGATGGTCTTGTTaGTTGAGAGATATGCAGGAT | + |
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Preference number: 3 (lower is better) Translates to: CAPPCRAKFLIKTIFLRNVRWSC*LRDMQD Trigger: ATCCTGCATATCTCTCAACAAACAAGACCATCTTAC...GTTTCTCAAGAATATCGTTTTGATCAAAAATTTAGCCCGGCATGGTGGTGCACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR TCA 90 bp | CATGACCACGGTACATTTGTCAAAACTAGGGCACCAACATTGAGAGATTGCTACTGGAGTGCACTGGTGTaGTCTTGGCTCACTGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: HDHGTFVKTRAPTLRDCYWSALV*SWLTAV Trigger: GACTGCAGTGAGCCAAGATCACACCAGTGCACTCCA...GTAGCAATCTCTCAATGTTGGTGCCCTAGTTTTGACAAATGTACCGTGGTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CCA 90 bp | CATGACCACGGTACATTTGTCAAAACTAGGGCACCAACATTGAGAGATTGCTACAGCACCTGGGCCATTTaGGCTGCAGTGGTACCTTTG | + |
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Preference number: 4 (lower is better) Translates to: HDHGTFVKTRAPTLRDCYSTWAI*AAVVPL Trigger: CAAAGGTACCACTGCAGCCCAAATGGCCCAGGTGCT...GTAGCAATCTCTCAATGTTGGTGCCCTAGTTTTGACAAATGTACCGTGGTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR GCA 90 bp | CATGACCACGGTACATTTGTCAAAACTAGGGCACCAACATTGAGAGATTGCTACTTGCCCAGGTTGGAGTaGACTGGTGTGATCTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HDHGTFVKTRAPTLRDCYLPRLE*TGVILA Trigger: AGCCAAGATCACACCAGTGCACTCCAACCTGGGCAA...GTAGCAATCTCTCAATGTTGGTGCCCTAGTTTTGACAAATGTACCGTGGTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR TCA 90 bp | CATGACCACGGTACATTTGTCAAAACTAGGGCACCAACATTGAGAGATTGCTACAACTGTCTTCCAGCTTaGACTTGGGAAGGTGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: HDHGTFVKTRAPTLRDCYNCLPA*TWEGVA Trigger: AGCTACACCTTCCCAAGTTCAAGCTGGAAGACAGTT...GTAGCAATCTCTCAATGTTGGTGCCCTAGTTTTGACAAATGTACCGTGGTCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR GCA 90 bp | CATGACCACGGTACATTTGTCAAAACTAGGGCACCAACATTGAGAGATTGCTACAGGTGTGCACCACCATaGCGGGCTAAATTTTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: HDHGTFVKTRAPTLRDCYRCAPP*RAKFLI Trigger: GATCAAAAATTTAGCCCGGCATGGTGGTGCACACCT...GTAGCAATCTCTCAATGTTGGTGCCCTAGTTTTGACAAATGTACCGTGGTCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CCA 90 bp | TGTGCACCACCATGCCGGGCTAAATTTTTGATCAAAACGATATTCTTGAGAAACCCATTTGGGCTGCAGTaGTACCTTTGGCGCCCAAAT | + |
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Preference number: 4 (lower is better) Translates to: CAPPCRAKFLIKTIFLRNPFGLQ*YLWRPN Trigger: ATTTGGGCGCCAAAGGTACCACTGCAGCCCAAATGG...GTTTCTCAAGAATATCGTTTTGATCAAAAATTTAGCCCGGCATGGTGGTGCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR GCA 90 bp | GTACAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAAACTCCCACTGCCAGCTaGAGCTTCAGTACCTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: VQFPQVITSYMTTVHLSKTPTAS*SFSTLF Trigger: GAACAAGGTACTGAAGCTGCAGCTGGCAGTGGGAGT...TTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTGTAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CCA 90 bp | CATGACCACGGTACATTTGTCAAAACTAGGGCACCAACATTGAGAGATTGCTACAACTCCAGGGCAAACTaGTTGATTGATGTTGCTAGA | + |
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Preference number: 4 (lower is better) Translates to: HDHGTFVKTRAPTLRDCYNSRAN*LIDVAR Trigger: TCTAGCAACATCAATCAACCAGTTTGCCCTGGAGTT...GTAGCAATCTCTCAATGTTGGTGCCCTAGTTTTGACAAATGTACCGTGGTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CCA 90 bp | GTACAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAACTGCAGTGGTACCTTTaGCGCCCAAATACACTATGG | + |
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Preference number: 4 (lower is better) Translates to: VQFPQVITSYMTTVHLSKLQWYL*RPNTLW Trigger: CCATAGTGTATTTGGGCGCCAAAGGTACCACTGCAG...TTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CCA 90 bp | TGTGCACCACCATGCCGGGCTAAATTTTTGATCAAAACGATATTCTTGAGAAACCCATCATGTCTGCACTaGTCCACTCATTCAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: CAPPCRAKFLIKTIFLRNPSCLH*STHSAS Trigger: AGAAGCTGAATGAGTGGACCAGTGCAGACATGATGG...GTTTCTCAAGAATATCGTTTTGATCAAAAATTTAGCCCGGCATGGTGGTGCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR TCA 90 bp | GTACAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAATCAGCTTCTCATAGGTaGTGGCCTTTTCCAGCTGTT | + |
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Preference number: 4 (lower is better) Translates to: VQFPQVITSYMTTVHLSKSASHR*WPFPAV Trigger: AACAGCTGGAAAAGGCCATCACCTATGAGAAGCTGA...TTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR GCA 90 bp | CATGACCACGGTACATTTGTCAAAACTAGGGCACCAACATTGAGAGATTGCTACGCAGAATTGGCAATTTaGTCCTGTAGTAAGAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: HDHGTFVKTRAPTLRDCYAELAI*SCSKRL Trigger: CAATCTCTTACTACAGGAGCAAATTGCCAATTCTGC...GTAGCAATCTCTCAATGTTGGTGCCCTAGTTTTGACAAATGTACCGTGGTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR GCA 90 bp | GTACAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAACAACTCCATCATGTCTaGACTGGTCCACTCATTCAG | + |
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Preference number: 4 (lower is better) Translates to: VQFPQVITSYMTTVHLSKQLHHV*TGPLIQ Trigger: CTGAATGAGTGGACCAGTGCAGACATGATGGAGTTG...TTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR GCA 90 bp | TGTGCACCACCATGCCGGGCTAAATTTTTGATCAAAACGATATTCTTGAGAAACTTGGGAAGGTGTAGCTaGACTTCATACAACTCCATC | + |
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Preference number: 4 (lower is better) Translates to: CAPPCRAKFLIKTIFLRNLGRCS*TSYNSI Trigger: GATGGAGTTGTATGAAGTGCAGCTACACCTTCCCAA...GTTTCTCAAGAATATCGTTTTGATCAAAAATTTAGCCCGGCATGGTGGTGCACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR TCA 90 bp | ATGGTACATTTTTCACACTGTAAGATGGTCTTGTTTGTTGAGAGATATGCAGGACCAGGGCAAACTGGTTaGTTGATGTTGCTAGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: MVHFSHCKMVLFVERYAGPGQTG*LMLLES Trigger: ACTCTCTAGCAACATCAATCAACCAGTTTGCCCTGG...TCCTGCATATCTCTCAACAAACAAGACCATCTTACAGTGTGAAAAATGTACCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR TCA 90 bp | TGTGCACCACCATGCCGGGCTAAATTTTTGATCAAAACGATATTCTTGAGAAACTATGGTCAAGGAAGTTaGGATGCTCCAGGAAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: CAPPCRAKFLIKTIFLRNYGQGS*DAPGRK Trigger: TTTTCTTCCTGGAGCATCTCAACTTCCTTGACCATA...GTTTCTCAAGAATATCGTTTTGATCAAAAATTTAGCCCGGCATGGTGGTGCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR TCA 90 bp | CAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAACTACATACTGCTCAGGGTTaGCTTGAGATCATAACTGTC | + |
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Preference number: 4 (lower is better) Translates to: QFPQVITSYMTTVHLSKLHTAQG*LEIITV Trigger: GACAGTTATGATCTCAAGTCAACCCTGAGCAGTATG...TAGTTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR TCA 90 bp | TGTGCACCACCATGCCGGGCTAAATTTTTGATCAAAACGATATTCTTGAGAAACATGGGTGATTTGCATTaGATTCAATGGATGGGACTC | + |
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Preference number: 4 (lower is better) Translates to: CAPPCRAKFLIKTIFLRNMGDLH*IQWMGL Trigger: GAGTCCCATCCATTGAATTCAATGCAAATCACCCAT...GTTTCTCAAGAATATCGTTTTGATCAAAAATTTAGCCCGGCATGGTGGTGCACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CCA 90 bp | CAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAACTACGCCCAAATACACTATaGTCAAGGAAGTTGAGATGC | + |
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Preference number: 4 (lower is better) Translates to: QFPQVITSYMTTVHLSKLRPNTL*SRKLRC Trigger: GCATCTCAACTTCCTTGACCATAGTGTATTTGGGCG...TAGTTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CCA 90 bp | ATGGTACATTTTTCACACTGTAAGATGGTCTTGTTTGTTGAGAGATATGCAGGATCAGGCAGGAGATTCTaGATTTTACCCTCGGTCTGT | + |
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Preference number: 4 (lower is better) Translates to: MVHFSHCKMVLFVERYAGSGRRF*ILPSVC Trigger: ACAGACCGAGGGTAAAATCCAGAATCTCCTGCCTGA...TCCTGCATATCTCTCAACAAACAAGACCATCTTACAGTGTGAAAAATGTACCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CCA 90 bp | CAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAACTAGAATCATCCTGGTTGTaGAATCCACAGAGTCATCAG | + |
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Preference number: 4 (lower is better) Translates to: QFPQVITSYMTTVHLSKLESSWL*NPQSHQ Trigger: CTGATGACTCTGTGGATTCCACAACCAGGATGATTC...TAGTTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CCA 90 bp | GTACAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAATCACCAGAATCATCCTaGTTGTGGAATCCACAGAGT | + |
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Preference number: 4 (lower is better) Translates to: VQFPQVITSYMTTVHLSKSPESS*LWNPQS Trigger: ACTCTGTGGATTCCACAACCAGGATGATTCTGGTGA...TTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR GCA 90 bp | CATGACCACGGTACATTTGTCAAAACTAGGGCACCAACATTGAGAGATTGCTACTTCATAAACATCATTTaGACTGGTTTGCTTGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: HDHGTFVKTRAPTLRDCYFINII*TGLLVV Trigger: GACTACAAGCAAACCAGTGCAAATGATGTTTATGAA...GTAGCAATCTCTCAATGTTGGTGCCCTAGTTTTGACAAATGTACCGTGGTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR GCA 90 bp | ATGGTACATTTTTCACACTGTAAGATGGTCTTGTTTGTTGAGAGATATGCAGGAGAGTTGAAGGCCCACTaGTTTTGGCTTTTCTATGTG | + |
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Preference number: 4 (lower is better) Translates to: MVHFSHCKMVLFVERYAGELKAH*FWLFYV Trigger: CACATAGAAAAGCCAAAAGCAGTGGGCCTTCAACTC...TCCTGCATATCTCTCAACAAACAAGACCATCTTACAGTGTGAAAAATGTACCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CCA 90 bp | CAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAACTAAAATCAGCTTTGCTTTaGCTGAAGGCATCACTCATC | + |
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Preference number: 4 (lower is better) Translates to: QFPQVITSYMTTVHLSKLKSALL*LKASLI Trigger: GATGAGTGATGCCTTCAGCCAAAGCAAAGCTGATTT...TAGTTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CCA 90 bp | CATGACCACGGTACATTTGTCAAAACTAGGGCACCAACATTGAGAGATTGCTACTTTCACACTGTAAGATaGTCTTGTTTGTTGAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: HDHGTFVKTRAPTLRDCYFHTVR*SCLLRD Trigger: ATCTCTCAACAAACAAGACCATCTTACAGTGTGAAA...GTAGCAATCTCTCAATGTTGGTGCCCTAGTTTTGACAAATGTACCGTGGTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR TCA 90 bp | TGTGCACCACCATGCCGGGCTAAATTTTTGATCAAAACGATATTCTTGAGAAACAAGATATTTTTACCCTaGGCAGATTCAGCTAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: CAPPCRAKFLIKTIFLRNKIFLP*ADSASF Trigger: AAAGCTAGCTGAATCTGCTCAGGGTAAAAATATCTT...GTTTCTCAAGAATATCGTTTTGATCAAAAATTTAGCCCGGCATGGTGGTGCACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR GCA 90 bp | ATGGTACATTTTTCACACTGTAAGATGGTCTTGTTTGTTGAGAGATATGCAGGAATTCAGCTAGCTTTTTaGTCAACTCCAGGGCAAACT | + |
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Preference number: 4 (lower is better) Translates to: MVHFSHCKMVLFVERYAGIQLAF*STPGQT Trigger: AGTTTGCCCTGGAGTTGAGCAAAAAGCTAGCTGAAT...TCCTGCATATCTCTCAACAAACAAGACCATCTTACAGTGTGAAAAATGTACCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR GCA 90 bp | GTACAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAAGATTGGCAGAAGAGGTaGAGAGATAATACAGCTAAT | + |
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Preference number: 4 (lower is better) Translates to: VQFPQVITSYMTTVHLSKDWQKR*RDNTAN Trigger: ATTAGCTGTATTATCTCTGCACCTCTTCTGCCAATC...TTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR TCA 90 bp | ATGGTACATTTTTCACACTGTAAGATGGTCTTGTTTGTTGAGAGATATGCAGGAACAAAGTTAACAGGCTaGGGTTCTGCACCAAAATAT | + |
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Preference number: 4 (lower is better) Translates to: MVHFSHCKMVLFVERYAGTKLTG*GSAPKY Trigger: ATATTTTGGTGCAGAACCTCAGCCTGTTAACTTTGT...TCCTGCATATCTCTCAACAAACAAGACCATCTTACAGTGTGAAAAATGTACCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR TCA 90 bp | CAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAACTAAAGAAGAGGAATGGGTaGTTTGCATTGAATTCAATG | + |
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Preference number: 4 (lower is better) Translates to: QFPQVITSYMTTVHLSKLKKRNG*FALNSM Trigger: CATTGAATTCAATGCAAATCACCCATTCCTCTTCTT...TAGTTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR GCA 90 bp | GTACAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAAAACAGGCTGAGGTTCTaGACCAAAATATGTTTTCAT | + |
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Preference number: 4 (lower is better) Translates to: VQFPQVITSYMTTVHLSKNRLRF*TKICFH Trigger: ATGAAAACATATTTTGGTGCAGAACCTCAGCCTGTT...TTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTGTAC 38% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR GCA 90 bp | ATGGTACATTTTTCACACTGTAAGATGGTCTTGTTTGTTGAGAGATATGCAGGAGAGGAATGGGTGATTTaGATTGAATTCAATGGATGG | + |
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Preference number: 4 (lower is better) Translates to: MVHFSHCKMVLFVERYAGEEWVI*IEFNGW Trigger: CCATCCATTGAATTCAATGCAAATCACCCATTCCTC...TCCTGCATATCTCTCAACAAACAAGACCATCTTACAGTGTGAAAAATGTACCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CCA 90 bp | GTACAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAAAAACATCATTTGCACTaGTTTGCTTGTAGTCTCGTT | + |
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Preference number: 4 (lower is better) Translates to: VQFPQVITSYMTTVHLSKKHHLH*FACSLV Trigger: AACGAGACTACAAGCAAACCAGTGCAAATGATGTTT...TTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTGTAC 38% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CCA 90 bp | CAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAACTAGGAATAATTTTAGATTaGCAGAAGAGGTGCAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: QFPQVITSYMTTVHLSKLGIILD*QKRCRD Trigger: ATCTCTGCACCTCTTCTGCCAATCTAAAATTATTCC...TAGTTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CCA 90 bp | ATGGTACATTTTTCACACTGTAAGATGGTCTTGTTTGTTGAGAGATATGCAGGAGATGAAGAAGAGGAATaGGTGATTTGCATTGAATTC | + |
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Preference number: 4 (lower is better) Translates to: MVHFSHCKMVLFVERYAGDEEEE*VICIEF Trigger: GAATTCAATGCAAATCACCCATTCCTCTTCTTCATC...TCCTGCATATCTCTCAACAAACAAGACCATCTTACAGTGTGAAAAATGTACCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS CCA 90 bp | ACTTTCCAGCAGCTCCAAGCCAGTGGACACATCGGCAATTTCATCTaGAAGCAACAAGAACATGCTAACATCTCCAGCATATGGGAGTTC | + |
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Preference number: 5 (lower is better) Translates to: TFQQLQASGHIGNFI*KQQEHANISSIWEF Trigger: GAACTCCCATATGCTGGAGATGTTAGCATGTTCTTGTTGCTTCCAGATGAAATTGCCGATGTGTCCACTGGCTTGGAGCTGCTGGAAAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000397996.6 ENST00000418725.1 |
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| CDS TCA 90 bp | GAGCAGATTCAGCTAGCTTTTTGCTCAACTCCAGGGCAAACTGGTTaGTTGATGTTGCTAGAGAGTCCATTGAGGAAACCTCAACTTCAT | + |
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Preference number: 5 (lower is better) Translates to: EQIQLAFCSTPGQTG*LMLLESPLRKPQLH Trigger: ATGAAGTTGAGGTTTCCTCAATGGACTCTCTAGCAACATCAATCAACCAGTTTGCCCTGGAGTTGAGCAAAAAGCTAGCTGAATCTGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000418725.1 |
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| CDS-3UTR CAA 90 bp | CATGACCACGGTACATTTGTCAAAACTAGGGCACCAACATTGAGAGATTGCTACCTATGGTCAAGGAAGTaGAGATGCTCCAGGAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: HDHGTFVKTRAPTLRDCYLWSRK*RCSRKK Trigger: TTTCTTCCTGGAGCATCTCAACTTCCTTGACCATAG...GTAGCAATCTCTCAATGTTGGTGCCCTAGTTTTGACAAATGTACCGTGGTCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CAA 90 bp | GTACAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAAGCTGCAGTGGTACCTTaGGCGCCCAAATACACTATG | + |
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Preference number: 5 (lower is better) Translates to: VQFPQVITSYMTTVHLSKAAVVP*APKYTM Trigger: CATAGTGTATTTGGGCGCCAAAGGTACCACTGCAGC...TTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS TCA 90 bp | ACTCAACTTCATCTTCAGCCATTTTGTCTTTGCTGGTCCACTTGTTaGGTTTGTCATAGGTTATTTCACTTTCCAGCAGCTCCAAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: TQLHLQPFCLCWSTC*VCHRLFHFPAAPSQ Trigger: CTGGCTTGGAGCTGCTGGAAAGTGAAATAACCTATGACAAACTCAACAAGTGGACCAGCAAAGACAAAATGGCTGAAGATGAAGTTGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000397996.6 |
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| CDS-3UTR CAA 90 bp | CAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAACTACCCACTGGAGCAGAATaGGCAATTTGCTCCTGTAGT | + |
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Preference number: 5 (lower is better) Translates to: QFPQVITSYMTTVHLSKLPTGAE*AICSCS Trigger: ACTACAGGAGCAAATTGCCAATTCTGCTCCAGTGGG...TAGTTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CAA 90 bp | TGTGCACCACCATGCCGGGCTAAATTTTTGATCAAAACGATATTCTTGAGAAACGATTCAGCTAGCTTTTaGCTCAACTCCAGGGCAAAC | + |
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Preference number: 5 (lower is better) Translates to: CAPPCRAKFLIKTIFLRNDSASF*LNSRAN Trigger: GTTTGCCCTGGAGTTGAGCAAAAAGCTAGCTGAATC...GTTTCTCAAGAATATCGTTTTGATCAAAAATTTAGCCCGGCATGGTGGTGCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CAA 90 bp | CATGACCACGGTACATTTGTCAAAACTAGGGCACCAACATTGAGAGATTGCTACGAAGGCCCACTGCTTTaGGCTTTTCTATGTGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: HDHGTFVKTRAPTLRDCYEGPLL*AFLCEK Trigger: TTTTTCACATAGAAAAGCCAAAAGCAGTGGGCCTTC...GTAGCAATCTCTCAATGTTGGTGCCCTAGTTTTGACAAATGTACCGTGGTCATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CAA 90 bp | ATGGTACATTTTTCACACTGTAAGATGGTCTTGTTTGTTGAGAGATATGCAGGATGCACTGGTGTGATCTaGGCTCACTGCAGTCTCAAC | + |
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Preference number: 5 (lower is better) Translates to: MVHFSHCKMVLFVERYAGCTGVI*AHCSLN Trigger: GTTGAGACTGCAGTGAGCCAAGATCACACCAGTGCA...TCCTGCATATCTCTCAACAAACAAGACCATCTTACAGTGTGAAAAATGTACCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CAA 90 bp | GTACAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAATCCATTGAGGAAACCTaGTTTTCTCCCACTGGAGCA | + |
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Preference number: 5 (lower is better) Translates to: VQFPQVITSYMTTVHLSKSIEET*FSPTGA Trigger: TGCTCCAGTGGGAGAAAACAAGGTTTCCTCAATGGA...TTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CAA 90 bp | GTACAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAAGCTTTTGTAGTAGAGTaGAAGGCCCACTGCTTTTGG | + |
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Preference number: 5 (lower is better) Translates to: VQFPQVITSYMTTVHLSKAFVVE*KAHCFW Trigger: CCAAAAGCAGTGGGCCTTCAACTCTACTACAAAAGC...TTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CAA 90 bp | ATGGTACATTTTTCACACTGTAAGATGGTCTTGTTTGTTGAGAGATATGCAGGATCTTCCAGCTTGAACTaGGGAAGGTGTAGCTGCACT | + |
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Preference number: 5 (lower is better) Translates to: MVHFSHCKMVLFVERYAGSSSLN*GRCSCT Trigger: AGTGCAGCTACACCTTCCCAAGTTCAAGCTGGAAGA...TCCTGCATATCTCTCAACAAACAAGACCATCTTACAGTGTGAAAAATGTACCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CAA 90 bp | CATGACCACGGTACATTTGTCAAAACTAGGGCACCAACATTGAGAGATTGCTACCACTGTAAGATGGTCTaGTTTGTTGAGAGATATGCA | + |
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Preference number: 5 (lower is better) Translates to: HDHGTFVKTRAPTLRDCYHCKMV*FVERYA Trigger: TGCATATCTCTCAACAAACAAGACCATCTTACAGTG...GTAGCAATCTCTCAATGTTGGTGCCCTAGTTTTGACAAATGTACCGTGGTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CAA 90 bp | CATGACCACGGTACATTTGTCAAAACTAGGGCACCAACATTGAGAGATTGCTACTGGAATAATTTTAGATaGGCAGAAGAGGTGCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: HDHGTFVKTRAPTLRDCYWNNFR*AEEVQR Trigger: TCTCTGCACCTCTTCTGCCAATCTAAAATTATTCCA...GTAGCAATCTCTCAATGTTGGTGCCCTAGTTTTGACAAATGTACCGTGGTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CAA 90 bp | ATGGTACATTTTTCACACTGTAAGATGGTCTTGTTTGTTGAGAGATATGCAGGATCCAGGGCAAACTGGTaGATTGATGTTGCTAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: MVHFSHCKMVLFVERYAGSRANW*IDVARE Trigger: CTCTCTAGCAACATCAATCAACCAGTTTGCCCTGGA...TCCTGCATATCTCTCAACAAACAAGACCATCTTACAGTGTGAAAAATGTACCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CAA 90 bp | ATGGTACATTTTTCACACTGTAAGATGGTCTTGTTTGTTGAGAGATATGCAGGACTGGTCTCTGTTAAATaGAAGCACCTGGGCCATTTG | + |
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Preference number: 5 (lower is better) Translates to: MVHFSHCKMVLFVERYAGLVSVK*KHLGHL Trigger: CAAATGGCCCAGGTGCTTCAATTTAACAGAGACCAG...TCCTGCATATCTCTCAACAAACAAGACCATCTTACAGTGTGAAAAATGTACCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CAA 90 bp | ATGGTACATTTTTCACACTGTAAGATGGTCTTGTTTGTTGAGAGATATGCAGGACTTTCAGGGTCACATTaGACTCCCTGGTCTCTGTTA | + |
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Preference number: 5 (lower is better) Translates to: MVHFSHCKMVLFVERYAGLSGSH*TPWSLL Trigger: TAACAGAGACCAGGGAGTCAAATGTGACCCTGAAAG...TCCTGCATATCTCTCAACAAACAAGACCATCTTACAGTGTGAAAAATGTACCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CAA 90 bp | ATGGTACATTTTTCACACTGTAAGATGGTCTTGTTTGTTGAGAGATATGCAGGACCAGAATCATCCTGGTaGTGGAATCCACAGAGTCAT | + |
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Preference number: 5 (lower is better) Translates to: MVHFSHCKMVLFVERYAGPESSW*WNPQSH Trigger: ATGACTCTGTGGATTCCACAACCAGGATGATTCTGG...TCCTGCATATCTCTCAACAAACAAGACCATCTTACAGTGTGAAAAATGTACCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CAA 90 bp | GTACAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAATTGCTAGAGAGTCCATaGAGGAAACCTTGTTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: VQFPQVITSYMTTVHLSKLLESP*RKPCFL Trigger: GAGAAAACAAGGTTTCCTCAATGGACTCTCTAGCAA...TTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CAA 90 bp | ATGGTACATTTTTCACACTGTAAGATGGTCTTGTTTGTTGAGAGATATGCAGGAGAAATCAGCTTTGCTTaGGCTGAAGGCATCACTCAT | + |
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Preference number: 5 (lower is better) Translates to: MVHFSHCKMVLFVERYAGEISFA*AEGITH Trigger: ATGAGTGATGCCTTCAGCCAAAGCAAAGCTGATTTC...TCCTGCATATCTCTCAACAAACAAGACCATCTTACAGTGTGAAAAATGTACCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CAA 90 bp | CAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAACTAGATGTCCTTTCTGATTaGATCAGAAGCTTCCACAAA | + |
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Preference number: 5 (lower is better) Translates to: QFPQVITSYMTTVHLSKLDVLSD*IRSFHK Trigger: TTTGTGGAAGCTTCTGATCAAATCAGAAAGGACATC...TAGTTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CAA 90 bp | GTACAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAAGTAAGATGGTCTTGTTaGTTGAGAGATATGCAGGAT | + |
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Preference number: 5 (lower is better) Translates to: VQFPQVITSYMTTVHLSKVRWSC*LRDMQD Trigger: ATCCTGCATATCTCTCAACAAACAAGACCATCTTAC...TTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CAA 90 bp | GTACAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAATGTATTTCTTCCGAGTaGCTCAAGTTGAATTCCATT | + |
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Preference number: 5 (lower is better) Translates to: VQFPQVITSYMTTVHLSKCISSE*LKLNSI Trigger: AATGGAATTCAACTTGAGCAACTCGGAAGAAATACA...TTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTGTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CAA 90 bp | GTACAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAAATCATTTGCACTGGTTaGCTTGTAGTCTCGTTTATT | + |
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Preference number: 5 (lower is better) Translates to: VQFPQVITSYMTTVHLSKIICTG*LVVSFI Trigger: AATAAACGAGACTACAAGCAAACCAGTGCAAATGAT...TTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTGTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CAA 90 bp | GTACAGTTTCCCCAAGTGATAACATCTTACATGACCACGGTACATTTGTCAAAAAGATGGTCTTGTTTGTaGAGAGATATGCAGGATTTA | + |
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Preference number: 5 (lower is better) Translates to: VQFPQVITSYMTTVHLSKRWSCL*RDMQDL Trigger: TAAATCCTGCATATCTCTCAACAAACAAGACCATCT...TTTTGACAAATGTACCGTGGTCATGTAAGATGTTATCACTTGGGGAAACTGTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CAA 90 bp | ATGGTACATTTTTCACACTGTAAGATGGTCTTGTTTGTTGAGAGATATGCAGGACTTCATAAACATCATTaGCACTGGTTTGCTTGTAGT | + |
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Preference number: 5 (lower is better) Translates to: MVHFSHCKMVLFVERYAGLHKHH*HWFACS Trigger: ACTACAAGCAAACCAGTGCAAATGATGTTTATGAAG...TCCTGCATATCTCTCAACAAACAAGACCATCTTACAGTGTGAAAAATGTACCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CAA 90 bp | ATGGTACATTTTTCACACTGTAAGATGGTCTTGTTTGTTGAGAGATATGCAGGATGCAGCTTCAGTACCTaGTTCATTTATTTCCACAAA | + |
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Preference number: 5 (lower is better) Translates to: MVHFSHCKMVLFVERYAGCSFST*FIYFHK Trigger: TTTGTGGAAATAAATGAACAAGGTACTGAAGCTGCA...TCCTGCATATCTCTCAACAAACAAGACCATCTTACAGTGTGAAAAATGTACCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS-3UTR CAA 90 bp | ATGGTACATTTTTCACACTGTAAGATGGTCTTGTTTGTTGAGAGATATGCAGGATGCCGGGCTAAATTTTaGATCAAAACGATATTCTTG | + |
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Preference number: 5 (lower is better) Translates to: MVHFSHCKMVLFVERYAGCRAKF*IKTIFL Trigger: CAAGAATATCGTTTTGATCAAAAATTTAGCCCGGCA...TCCTGCATATCTCTCAACAAACAAGACCATCTTACAGTGTGAAAAATGTACCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000238508.8 |
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| CDS CAA 90 bp | ACCCTCGGTCTGTCTTTCAACCCAAGAGTTGATGTCCTTTCTGATTaGATCAGAAGCTTCCACAAAGTTAACAGGCTGAGGTTCTGCACC | + |
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Preference number: 6 (lower is better) Translates to: TLGLSFNPRVDVLSD*IRSFHKVNRLRFCT Trigger: GGTGCAGAACCTCAGCCTGTTAACTTTGTGGAAGCTTCTGATCAAATCAGAAAGGACATCAACTCTTGGGTTGAAAGACAGACCGAGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000238508.8 ENST00000619595.1 |
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| CDS CAA 72 bp | TCAGCTAGCTTTTTGCTCAACTCCAGGGCAAACTGGTaGATTGATGTTGCTAGAGAGTCCATTGAGGAAACC | + |
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Preference number: 6 (lower is better) Translates to: SASFLLNSRANW*IDVARESIEET Trigger: GGTTTCCTCAATGGACTCTCTAGCAACATCAATCAACCAGTTTGCCCTGGAGTTGAGCAAAAAGCTAGCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000238508.8 ENST00000397996.6 ENST00000418725.1 |
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| CDS CCA 72 bp | GATTCAGCTAGCTTTTTGCTCAACTCCAGGGCAAACTaGTTGATTGATGTTGCTAGAGAGTCCATTGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: DSASFLLNSRAN*LIDVARESIEE Trigger: TTCCTCAATGGACTCTCTAGCAACATCAATCAACCAGTTTGCCCTGGAGTTGAGCAAAAAGCTAGCTGAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000238508.8 ENST00000397996.6 ENST00000418725.1 |
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| CDS CAA 72 bp | CTGTCTTTCAACCCAAGAGTTGATGTCCTTTCTGATTaGATCAGAAGCTTCCACAAAGTTAACAGGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: LSFNPRVDVLSD*IRSFHKVNRLR Trigger: CCTCAGCCTGTTAACTTTGTGGAAGCTTCTGATCAAATCAGAAAGGACATCAACTCTTGGGTTGAAAGACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000238508.8 ENST00000619595.1 |
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| CDS TCA 72 bp | CATCTTCAGCCATTTTGTCTTTGCTGGTCCACTTGTTaGGTTTGTCATAGGTTATTTCACTTTCCAGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: HLQPFCLCWSTC*VCHRLFHFPAA Trigger: AGCTGCTGGAAAGTGAAATAACCTATGACAAACTCAACAAGTGGACCAGCAAAGACAAAATGGCTGAAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000397996.6 ENST00000418725.1 |
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| CDS GCA 72 bp | TCTAATTCGTATATCTATCTCACTCCCACTGCCAGCTaGAGCTTCAGTACCTTGTTCATTTATTTCCACAAA | + |
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Preference number: 6 (lower is better) Translates to: SNSYIYLTPTAS*SFSTLFIYFHK Trigger: TTTGTGGAAATAAATGAACAAGGTACTGAAGCTGCAGCTGGCAGTGGGAGTGAGATAGATATACGAATTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000238508.8 ENST00000619595.1 |
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| CDS CAA 72 bp | TACCTTTGGCGCCCAAATACACTATGGTCAAGGAAGTaGAGATGCTCCAGGAAGAAAAGAAGATATTTTTAC | + |
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Preference number: 6 (lower is better) Translates to: YLWRPNTLWSRK*RCSRKKRRYFY Trigger: GTAAAAATATCTTCTTTTCTTCCTGGAGCATCTCAACTTCCTTGACCATAGTGTATTTGGGCGCCAAAGGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000238508.8 ENST00000397996.6 ENST00000418725.1 ENST00000619595.1 |
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