Pregenerated sensors for SERPINB1 (Homo sapiens)
Ensembl gene IDs: ENSG00000021355Ensembl transcript IDs: ENST00000380739.6, ENST00000460260.1, ENST00000468511.5, ENST00000476896.5, ENST00000490094.5
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | TTCGTAACCTGGGCTCTCAATTGGGGTGCTCTCTTACATTTCAATTaGATATCTGTTTTTAAACCTCCCTTCAACAGTCAGGGTGTCTGT | + |
Preference number: 1 (lower is better) Translates to: FVTWALNWGALLHFN*ISVFKPPFNSQGVC Trigger: ACAGACACCCTGACTGTTGAAGGGAGGTTTAAAAACAGATATTCAATTGAAATGTAAGAGAGCACCCCAATTGAGAGCCCAGGTTACGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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3UTR-3UTR CCA 90 bp | CACACAGCCTTGGAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGGCCAGGCTTGTCTTCGTAACCTaGGCTCTCAATTGGGGTGCT | + |
Preference number: 2 (lower is better) Translates to: HTALEVKSLNQKTHEKARLVFVT*ALNWGA Trigger: AGCACCCCAATTGAGAGCCCAGGTTACGAAGACAAG...CCTGGCCTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTCCAAGGCTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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3UTR-3UTR GCA 90 bp | GAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGGCCAGGCATGGTAGCTCAGGCTCTCAATTGGGGTaGTCTCTTACATTTCAATTG | + |
Preference number: 2 (lower is better) Translates to: EVKSLNQKTHEKARHGSSGSQLG*SLTFQL Trigger: CAATTGAAATGTAAGAGAGCACCCCAATTGAGAGCC...TGAGCTACCATGCCTGGCCTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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3UTR-3UTR CCA 90 bp | CAGAATACTAATCCTGCAGAACAAGGGACAGAAAAGTCAGGCGAGGCAAGCTTGTATCATGTTTTCCCATaGCTATCAGGAGGATATAGC | + |
Preference number: 2 (lower is better) Translates to: QNTNPAEQGTEKSGEASLYHVFP*LSGGYS Trigger: GCTATATCCTCCTGATAGCCATGGGAAAACATGATA...CAAGCTTGCCTCGCCTGACTTTTCTGTCCCTTGTTCTGCAGGATTAGTATTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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3UTR-3UTR CAA 90 bp | GAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGGCCAGGCATGGTAGCTCAAACCTGGGCTCTCAATaGGGGTGCTCTCTTACATTT | + |
Preference number: 3 (lower is better) Translates to: EVKSLNQKTHEKARHGSSNLGSQ*GCSLTF Trigger: AAATGTAAGAGAGCACCCCAATTGAGAGCCCAGGTT...TGAGCTACCATGCCTGGCCTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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3UTR CCA 72 bp | AGAAAAGTCAGGCGAGGCAAGCTTGTCTTCGTAACCTaGGCTCTCAATTGGGGTGCTCTCTTACATTTCAAT | + |
Preference number: 3 (lower is better) Translates to: RKVRRGKLVFVT*ALNWGALLHFN Trigger: ATTGAAATGTAAGAGAGCACCCCAATTGAGAGCCCAGGTTACGAAGACAAGCTTGCCTCGCCTGACTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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3UTR TCA 72 bp | ATGCGGCGTTTCAAGCTCCATTCAAAGAACTACATTTaGCAAAGTTTTATATCAGTCCAAGAGCCCCCACCC | + |
Preference number: 3 (lower is better) Translates to: MRRFKLHSKNYI*QSFISVQEPPP Trigger: GGGTGGGGGCTCTTGGACTGATATAAAACTTTGTCAAATGTAGTTCTTTGAATGGAGCTTGAAACGCCGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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3UTR GCA 72 bp | TTCATGATGCCCACTATCCTTGTGGGAGCAAGAATATaGGGCGTTTCAAGCTCCATTCAAAGAACTACATTT | + |
Preference number: 3 (lower is better) Translates to: FMMPTILVGARI*GVSSSIQRTTF Trigger: AAATGTAGTTCTTTGAATGGAGCTTGAAACGCCGCATATTCTTGCTCCCACAAGGATAGTGGGCATCATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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3UTR TCA 72 bp | ACTCTTGGTATCTTTTATCCTAAGACACCCACTTCTTaGTTTCATGCAGCGCCACATGAACTATATATTATA | + |
Preference number: 3 (lower is better) Translates to: TLGIFYPKTPTS*FHAAPHELYII Trigger: TATAATATATAGTTCATGTGGCGCTGCATGAAATCAAGAAGTGGGTGTCTTAGGATAAAAGATACCAAGAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR TCA 90 bp | CAGAATACTAATCCTGCAGAACAAGGGACAGAAAAGTCAGGCGAGGCAAGCTTGGGTGCGCGGATCACCTaGGGTCAGGAGTTCGGGACC | + |
Preference number: 4 (lower is better) Translates to: QNTNPAEQGTEKSGEASLGARIT*GQEFGT Trigger: GGTCCCGAACTCCTGACCTCAGGTGATCCGCGCACC...CAAGCTTGCCTCGCCTGACTTTTCTGTCCCTTGTTCTGCAGGATTAGTATTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR CCA 90 bp | AACAAGGGACAGAAAAGTCAGGCGAGGCAAGCTTGTCTTCGTAACCTGGGCTCTAGTTCGGGACCAGCCTaGCCAACATGGAAAAACCCC | + |
Preference number: 4 (lower is better) Translates to: NKGQKSQARQACLRNLGSSSGPA*PTWKNP Trigger: GGGGTTTTTCCATGTTGGCCAGGCTGGTCCCGAACT...AGAGCCCAGGTTACGAAGACAAGCTTGCCTCGCCTGACTTTTCTGTCCCTTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR GCA 90 bp | GAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGGCCAGGCATGGTAGCTCAGAAAGTTGCGATGCCTaGTGTGGCAGCTGCCGCCTC | + |
Preference number: 4 (lower is better) Translates to: EVKSLNQKTHEKARHGSSESCDA*CGSCRL Trigger: GAGGCGGCAGCTGCCACAGCAGGCATCGCAACTTTC...TGAGCTACCATGCCTGGCCTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR GCA 90 bp | CACACAGCCTTGGAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGGCCAGGTGCAGAAAGTTGCGATaGCTGCTGTGGCAGCTGCCG | + |
Preference number: 4 (lower is better) Translates to: HTALEVKSLNQKTHEKARCRKLR*LLWQLP Trigger: CGGCAGCTGCCACAGCAGGCATCGCAACTTTCTGCA...CCTGGCCTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTCCAAGGCTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR GCA 90 bp | AACAAGGGACAGAAAAGTCAGGCGAGGCAAGCTTGTCTTCGTAACCTGGGCTCTCAACATGCAGAAAGTTaGGATGCCTGCTGTGGCAGC | + |
Preference number: 4 (lower is better) Translates to: NKGQKSQARQACLRNLGSQHAES*DACCGS Trigger: GCTGCCACAGCAGGCATCGCAACTTTCTGCATGTTG...AGAGCCCAGGTTACGAAGACAAGCTTGCCTCGCCTGACTTTTCTGTCCCTTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR CCA 90 bp | AACAAGGGACAGAAAAGTCAGGCGAGGCAAGCTTGTCTTCGTAACCTGGGCTCTCTGCCGTGTTACCTCTaGTCCCCAGAAAAACCATGG | + |
Preference number: 4 (lower is better) Translates to: NKGQKSQARQACLRNLGSLPCYL*SPEKPW Trigger: CCATGGTTTTTCTGGGGACCAGAGGTAACACGGCAG...AGAGCCCAGGTTACGAAGACAAGCTTGCCTCGCCTGACTTTTCTGTCCCTTGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR CCA 90 bp | AACAAGGGACAGAAAAGTCAGGCGAGGCAAGCTTGTCTTCGTAACCTGGGCTCTCTTGTCTTCGTAACCTaGGCTCTCAATTGGGGTGCT | + |
Preference number: 4 (lower is better) Translates to: NKGQKSQARQACLRNLGSLVFVT*ALNWGA Trigger: AGCACCCCAATTGAGAGCCCAGGTTACGAAGACAAG...AGAGCCCAGGTTACGAAGACAAGCTTGCCTCGCCTGACTTTTCTGTCCCTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR CCA 90 bp | AACAAGGGACAGAAAAGTCAGGCGAGGCAAGCTTGTCTTCGTAACCTGGGCTCTCTCCCCACACAGCCTTaGAAGTCAAGAGCCTTAATC | + |
Preference number: 4 (lower is better) Translates to: NKGQKSQARQACLRNLGSLPTQP*KSRALI Trigger: GATTAAGGCTCTTGACTTCCAAGGCTGTGTGGGGAG...AGAGCCCAGGTTACGAAGACAAGCTTGCCTCGCCTGACTTTTCTGTCCCTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR TCA 90 bp | AACAAGGGACAGAAAAGTCAGGCGAGGCAAGCTTGTCTTCGTAACCTGGGCTCTCATGGCCATAGCAGATaGAATGCTGAAGGGAGAGAT | + |
Preference number: 4 (lower is better) Translates to: NKGQKSQARQACLRNLGSHGHSR*NAEGRD Trigger: ATCTCTCCCTTCAGCATTTCATCTGCTATGGCCATG...AGAGCCCAGGTTACGAAGACAAGCTTGCCTCGCCTGACTTTTCTGTCCCTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR TCA 90 bp | CACACAGCCTTGGAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGGCCAGGTCTTCAGAGGCATGCTaGAAATCCACACTGGCCAGG | + |
Preference number: 4 (lower is better) Translates to: HTALEVKSLNQKTHEKARSSEAC*KSTLAR Trigger: CCTGGCCAGTGTGGATTTTCAGCATGCCTCTGAAGA...CCTGGCCTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTCCAAGGCTGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR TCA 90 bp | GAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGGCCAGGCATGGTAGCTCAGGGCGAGGTCGGAGTTaGGAGTGTAACTCTCTTCCA | + |
Preference number: 4 (lower is better) Translates to: EVKSLNQKTHEKARHGSSGRGRS*ECNSLP Trigger: TGGAAGAGAGTTACACTCTCAACTCCGACCTCGCCC...TGAGCTACCATGCCTGGCCTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR GCA 90 bp | GAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGGCCAGGCATGGTAGCTCACTGTTAAAGAGATCCTaGACACCTAGGCGGGCGAGG | + |
Preference number: 4 (lower is better) Translates to: EVKSLNQKTHEKARHGSSLLKRS*TPRRAR Trigger: CCTCGCCCGCCTAGGTGTGCAGGATCTCTTTAACAG...TGAGCTACCATGCCTGGCCTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR TCA 90 bp | AACAAGGGACAGAAAAGTCAGGCGAGGCAAGCTTGTCTTCGTAACCTGGGCTCTCCTCTTCAACCGTGTTaGAATGGAAAGTCTTGGACA | + |
Preference number: 4 (lower is better) Translates to: NKGQKSQARQACLRNLGSPLQPC*NGKSWT Trigger: TGTCCAAGACTTTCCATTTCAACACGGTTGAAGAGG...AGAGCCCAGGTTACGAAGACAAGCTTGCCTCGCCTGACTTTTCTGTCCCTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR GCA 90 bp | CAGAATACTAATCCTGCAGAACAAGGGACAGAAAAGTCAGGCGAGGCAAGCTTGTTTGCTGAGCTCAGCTaGTCCATGGTGAAAACCGAC | + |
Preference number: 4 (lower is better) Translates to: QNTNPAEQGTEKSGEASLFAELS*SMVKTD Trigger: GTCGGTTTTCACCATGGAGCAGCTGAGCTCAGCAAA...CAAGCTTGCCTCGCCTGACTTTTCTGTCCCTTGTTCTGCAGGATTAGTATTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR GCA 90 bp | AACAAGGGACAGAAAAGTCAGGCGAGGCAAGCTTGTCTTCGTAACCTGGGCTCTTCCCCAAGAATAGGATaGTACCTGAGGAATTATGCC | + |
Preference number: 4 (lower is better) Translates to: NKGQKSQARQACLRNLGSSPRIG*YLRNYA Trigger: GGCATAATTCCTCAGGTAGCATCCTATTCTTGGGGA...AGAGCCCAGGTTACGAAGACAAGCTTGCCTCGCCTGACTTTTCTGTCCCTTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR TCA 90 bp | AACAAGGGACAGAAAAGTCAGGCGAGGCAAGCTTGTCTTCGTAACCTGGGCTCTGCACCATATGTTTTCTaGGTCGAAACCAAGAACTCA | + |
Preference number: 4 (lower is better) Translates to: NKGQKSQARQACLRNLGSAPYVF*VETKNS Trigger: TGAGTTCTTGGTTTCGACTCAGAAAACATATGGTGC...AGAGCCCAGGTTACGAAGACAAGCTTGCCTCGCCTGACTTTTCTGTCCCTTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR TCA 90 bp | CACACAGCCTTGGAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGGCCAGGAAGACACCCACTTCTTaGTTTCATGCAGCGCCACAT | + |
Preference number: 4 (lower is better) Translates to: HTALEVKSLNQKTHEKARKTPTS*FHAAPH Trigger: ATGTGGCGCTGCATGAAATCAAGAAGTGGGTGTCTT...CCTGGCCTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTCCAAGGCTGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR GCA 90 bp | CAGAATACTAATCCTGCAGAACAAGGGACAGAAAAGTCAGGCGAGGCAAGCTTGTCATGTTATCAACCATaGCCGAAGCCAACAGTTCCG | + |
Preference number: 4 (lower is better) Translates to: QNTNPAEQGTEKSGEASLSCYQP*PKPTVP Trigger: CGGAACTGTTGGCTTCGGGCATGGTTGATAACATGA...CAAGCTTGCCTCGCCTGACTTTTCTGTCCCTTGTTCTGCAGGATTAGTATTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR GCA 90 bp | TCTCCCCACACAGCCTTGGAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGCTTCGGGCATCAACATaGAGAAAGTTGCGATGCCTG | + |
Preference number: 4 (lower is better) Translates to: SPHTALEVKSLNQKTHEKLRAST*RKLRCL Trigger: CAGGCATCGCAACTTTCTGCATGTTGATGCCCGAAG...CTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTCCAAGGCTGTGTGGGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR CCA 90 bp | GAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGGCCAGGCATGGTAGCTCATCTTCTTCAGGCCCGTaGACTCGTCCTCAATGTCAT | + |
Preference number: 4 (lower is better) Translates to: EVKSLNQKTHEKARHGSSSSSGP*TRPQCH Trigger: ATGACATTGAGGACGAGTCCACGGGCCTGAAGAAGA...TGAGCTACCATGCCTGGCCTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR CCA 90 bp | CACACAGCCTTGGAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGGCCAGGACCTGGGCTCTCAATTaGGGTGCTCTCTTACATTTC | + |
Preference number: 4 (lower is better) Translates to: HTALEVKSLNQKTHEKARTWALN*GALLHF Trigger: GAAATGTAAGAGAGCACCCCAATTGAGAGCCCAGGT...CCTGGCCTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTCCAAGGCTGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR TCA 90 bp | GAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGGCCAGGCATGGTAGCTCACTTCTGTCTGTCCTTTaGCCCACTGGTTTATGGTCT | + |
Preference number: 4 (lower is better) Translates to: EVKSLNQKTHEKARHGSSLLSVL*PTGLWS Trigger: AGACCATAAACCAGTGGGTCAAAGGACAGACAGAAG...TGAGCTACCATGCCTGGCCTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR CCA 90 bp | AACAAGGGACAGAAAAGTCAGGCGAGGCAAGCTTGTCTTCGTAACCTGGGCTCTTATCATGTTTTCCCATaGCTATCAGGAGGATATAGC | + |
Preference number: 4 (lower is better) Translates to: NKGQKSQARQACLRNLGSYHVFP*LSGGYS Trigger: GCTATATCCTCCTGATAGCCATGGGAAAACATGATA...AGAGCCCAGGTTACGAAGACAAGCTTGCCTCGCCTGACTTTTCTGTCCCTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR TCA 90 bp | CAGAATACTAATCCTGCAGAACAAGGGACAGAAAAGTCAGGCGAGGCAAGCTTGCTTTCTTATTCAATCTaGATGGTGCATTCGTCGTGG | + |
Preference number: 4 (lower is better) Translates to: QNTNPAEQGTEKSGEASLLSYSI*MVHSSW Trigger: CCACGACGAATGCACCATTCAGATTGAATAAGAAAG...CAAGCTTGCCTCGCCTGACTTTTCTGTCCCTTGTTCTGCAGGATTAGTATTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR GCA 90 bp | TCTCCCCACACAGCCTTGGAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGGTTTATGGTCTTCCTTaGATCTTCAGAGGCATGCTG | + |
Preference number: 4 (lower is better) Translates to: SPHTALEVKSLNQKTHEKVYGLP*IFRGML Trigger: CAGCATGCCTCTGAAGATGCAAGGAAGACCATAAAC...CTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTCCAAGGCTGTGTGGGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR GCA 90 bp | CACACAGCCTTGGAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGGCCAGGGGCTCTCAATTGGGGTaGTCTCTTACATTTCAATTG | + |
Preference number: 4 (lower is better) Translates to: HTALEVKSLNQKTHEKARGSQLG*SLTFQL Trigger: CAATTGAAATGTAAGAGAGCACCCCAATTGAGAGCC...CCTGGCCTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTCCAAGGCTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR CCA 90 bp | GAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGGCCAGGCATGGTAGCTCATGTCCTTTGACCCACTaGTTTATGGTCTTCCTTGCA | + |
Preference number: 4 (lower is better) Translates to: EVKSLNQKTHEKARHGSSCPLTH*FMVFLA Trigger: TGCAAGGAAGACCATAAACCAGTGGGTCAAAGGACA...TGAGCTACCATGCCTGGCCTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR CCA 90 bp | CACACAGCCTTGGAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGGCCAGGCTTATTCAATCTGAATaGTGCATTCGTCGTGGCTTC | + |
Preference number: 4 (lower is better) Translates to: HTALEVKSLNQKTHEKARLIQSE*CIRRGF Trigger: GAAGCCACGACGAATGCACCATTCAGATTGAATAAG...CCTGGCCTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTCCAAGGCTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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3UTR CAA 72 bp | GCGAGGCAAGCTTGTCTTCGTAACCTGGGCTCTCAATaGGGGTGCTCTCTTACATTTCAATTGAATATCTGT | + |
Preference number: 4 (lower is better) Translates to: ARQACLRNLGSQ*GCSLTFQLNIC Trigger: ACAGATATTCAATTGAAATGTAAGAGAGCACCCCAATTGAGAGCCCAGGTTACGAAGACAAGCTTGCCTCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR TCA 90 bp | ATAAATGACCATCTTATCATGTTTTCCCATGGCTATCAGGAGGATATAGCAATTGAAGCGGGTGTTTGCTaGGCTCAGCTGCTCCATGGT | + |
Preference number: 4 (lower is better) Translates to: INDHLIMFSHGYQEDIAIEAGVC*AQLLHG Trigger: ACCATGGAGCAGCTGAGCTCAGCAAACACCCGCTTC...AATTGCTATATCCTCCTGATAGCCATGGGAAAACATGATAAGATGGTCATTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR TCA 90 bp | CAGAATACTAATCCTGCAGAACAAGGGACAGAAAAGTCAGGCGAGGCAAGCTTGCGTTTTATTAATTCATaGTGCCCACTATCCTTGTGG | + |
Preference number: 4 (lower is better) Translates to: QNTNPAEQGTEKSGEASLRFINS*CPLSLW Trigger: CCACAAGGATAGTGGGCATCATGAATTAATAAAACG...CAAGCTTGCCTCGCCTGACTTTTCTGTCCCTTGTTCTGCAGGATTAGTATTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR GCA 90 bp | CACACAGCCTTGGAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGGCCAGGGGTTTAGTCCACTCATaGAACTTTTCCAAAGTCAAC | + |
Preference number: 4 (lower is better) Translates to: HTALEVKSLNQKTHEKARGLVHS*NFSKVN Trigger: GTTGACTTTGGAAAAGTTGCATGAGTGGACTAAACC...CCTGGCCTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTCCAAGGCTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR CCA 90 bp | GAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGGCCAGGCATGGTAGCTCATCAACCGTGTTGAAATaGAAAGTCTTGGACAGCTGT | + |
Preference number: 4 (lower is better) Translates to: EVKSLNQKTHEKARHGSSSTVLK*KVLDSC Trigger: ACAGCTGTCCAAGACTTTCCATTTCAACACGGTTGA...TGAGCTACCATGCCTGGCCTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR GCA 90 bp | GAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGGCCAGGCATGGTAGCTCAATTCAATCTGAATGGTaGATTCGTCGTGGCTTCTTT | + |
Preference number: 4 (lower is better) Translates to: EVKSLNQKTHEKARHGSSIQSEW*IRRGFF Trigger: AAAGAAGCCACGACGAATGCACCATTCAGATTGAAT...TGAGCTACCATGCCTGGCCTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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3UTR CAA 72 bp | TATGCGGCGTTTCAAGCTCCATTCAAAGAACTACATTaGACAAAGTTTTATATCAGTCCAAGAGCCCCCACC | + |
Preference number: 4 (lower is better) Translates to: YAAFQAPFKELH*TKFYISPRAPT Trigger: GGTGGGGGCTCTTGGACTGATATAAAACTTTGTCAAATGTAGTTCTTTGAATGGAGCTTGAAACGCCGCATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR CCA 90 bp | TCTCCCCACACAGCCTTGGAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGAAACACATGAGAAGGTaGCTAACAGTAAAACCTTTG | + |
Preference number: 4 (lower is better) Translates to: SPHTALEVKSLNQKTHEKKHMRR*LTVKPL Trigger: CAAAGGTTTTACTGTTAGCCACCTTCTCATGTGTTT...CTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTCCAAGGCTGTGTGGGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR TCA 90 bp | ATAAATGACCATCTTATCATGTTTTCCCATGGCTATCAGGAGGATATAGCAATTAATATCTCTGGCTCCTaGCATGCCAGACAGATCAGC | + |
Preference number: 4 (lower is better) Translates to: INDHLIMFSHGYQEDIAINISGS*HARQIS Trigger: GCTGATCTGTCTGGCATGTCAGGAGCCAGAGATATT...AATTGCTATATCCTCCTGATAGCCATGGGAAAACATGATAAGATGGTCATTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR TCA 90 bp | ATAAATGACCATCTTATCATGTTTTCCCATGGCTATCAGGAGGATATAGCAATTATGGATGGTCGGCAGTaGAATTTTCTTCGGGCATCA | + |
Preference number: 4 (lower is better) Translates to: INDHLIMFSHGYQEDIAIMDGRQ*NFLRAS Trigger: TGATGCCCGAAGAAAATTTCACTGCCGACCATCCAT...AATTGCTATATCCTCCTGATAGCCATGGGAAAACATGATAAGATGGTCATTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR TCA 90 bp | ATAAATGACCATCTTATCATGTTTTCCCATGGCTATCAGGAGGATATAGCAATTCTCTGGAATCTTGAATaGACCTCTTCAACCGTGTTG | + |
Preference number: 4 (lower is better) Translates to: INDHLIMFSHGYQEDIAILWNLE*TSSTVL Trigger: CAACACGGTTGAAGAGGTTCATTCAAGATTCCAGAG...AATTGCTATATCCTCCTGATAGCCATGGGAAAACATGATAAGATGGTCATTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR CCA 90 bp | ATAAATGACCATCTTATCATGTTTTCCCATGGCTATCAGGAGGATATAGCAATTAAGAAAAGGAATGGATaGTCGGCAGTGAAATTTTCT | + |
Preference number: 4 (lower is better) Translates to: INDHLIMFSHGYQEDIAIKKRNG*SAVKFS Trigger: AGAAAATTTCACTGCCGACCATCCATTCCTTTTCTT...AATTGCTATATCCTCCTGATAGCCATGGGAAAACATGATAAGATGGTCATTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS GCA 90 bp | GCTCCGAGCTGGGTGCGAGGTCAGGAAGGAGGCACCGAGGGCCGCTaGTCTTATAGCAGGCGGAAGCGTCACCCGGGCCAGCAGCCGCGG | + |
Preference number: 5 (lower is better) Translates to: APSWVRGQEGGTEGR*SYSRRKRHPGQQPR Trigger: CCGCGGCTGCTGGCCCGGGTGACGCTTCCGCCTGCTATAAGAGCAGCGGCCCTCGGTGCCTCCTTCCTGACCTCGCACCCAGCTCGGAGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490094.5 |
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CDS CCA 90 bp | TCCCTGCAGCTGCAGATAGGAGCCGCGGCCTGGCCCTGGGCTGCCTaGAAACCGTCACAAACAGCTCCGACAGGCCGCCGAGGCACGCTC | + |
Preference number: 5 (lower is better) Translates to: SLQLQIGAAAWPWAA*KPSQTAPTGRRGTL Trigger: GAGCGTGCCTCGGCGGCCTGTCGGAGCTGTTTGTGACGGTTTCCAGGCAGCCCAGGGCCAGGCCGCGGCTCCTATCTGCAGCTGCAGGGA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476896.5 |
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CDS CCA 90 bp | GATGAAATGCCGACAGGCCGCCGAGGCACGCTCCGGGCTCCGAGCTaGGTGCGAGGTCAGGAAGGAGGCACCGAGGGCCGCTGCTCTTAT | + |
Preference number: 5 (lower is better) Translates to: DEMPTGRRGTLRAPS*VRGQEGGTEGRCSY Trigger: ATAAGAGCAGCGGCCCTCGGTGCCTCCTTCCTGACCTCGCACCCAGCTCGGAGCCCGGAGCGTGCCTCGGCGGCCTGTCGGCATTTCATC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490094.5 |
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CDS CCA 90 bp | TCCTCTCTCTCCCTGCAGCTGCAGATAGGAGCCGCGGCCTGGCCCTaGGCTGCCTGGAAACCGTCACAAACAGCTCCGACAGGCCGCCGA | + |
Preference number: 5 (lower is better) Translates to: SSLSLQLQIGAAAWP*AAWKPSQTAPTGRR Trigger: TCGGCGGCCTGTCGGAGCTGTTTGTGACGGTTTCCAGGCAGCCCAGGGCCAGGCCGCGGCTCCTATCTGCAGCTGCAGGGAGAGAGAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476896.5 |
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CDS TCA 90 bp | CTCACTCAACGCCAGGAACAGGTCCAAGGCGAAGCGGGTGTTTGCTaGGCTCAGCTGCTCCATGGTGAAAACCGACAGGCCGCCGAGGCA | + |
Preference number: 5 (lower is better) Translates to: LTQRQEQVQGEAGVC*AQLLHGENRQAAEA Trigger: TGCCTCGGCGGCCTGTCGGTTTTCACCATGGAGCAGCTGAGCTCAGCAAACACCCGCTTCGCCTTGGACCTGTTCCTGGCGTTGAGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS TCA 90 bp | CTCACTCAACGCCAGGAACAGGTCCAAGGCGAAGCGGGTGTTTGCTaGGCTCAGCTGCTCCATGGTGAAAACACAGTCCAGGGTCTGGCC | + |
Preference number: 5 (lower is better) Translates to: LTQRQEQVQGEAGVC*AQLLHGENTVQGLA Trigger: GGCCAGACCCTGGACTGTGTTTTCACCATGGAGCAGCTGAGCTCAGCAAACACCCGCTTCGCCTTGGACCTGTTCCTGGCGTTGAGTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476896.5 |
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CDS-3UTR CAA 90 bp | CACACAGCCTTGGAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGGCCAGGGCTGAGCTCCTCGCCTaGGTAAGGCAGTTCCAGCAC | + |
Preference number: 5 (lower is better) Translates to: HTALEVKSLNQKTHEKARAELLA*VRQFQH Trigger: GTGCTGGAACTGCCTTACCAAGGCGAGGAGCTCAGC...CCTGGCCTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTCCAAGGCTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS GCA 90 bp | ATGGTCGGCAGTGAAATTTTCTTCGGGCATCAACATGCAGAAAGTTaGGATGCCTGCTGTGGCAGCTGCCGCCTCTGTTCCCTCTTCATT | + |
Preference number: 5 (lower is better) Translates to: MVGSEIFFGHQHAES*DACCGSCRLCSLFI Trigger: AATGAAGAGGGAACAGAGGCGGCAGCTGCCACAGCAGGCATCGCAACTTTCTGCATGTTGATGCCCGAAGAAAATTTCACTGCCGACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR CAA 90 bp | AACAAGGGACAGAAAAGTCAGGCGAGGCAAGCTTGTCTTCGTAACCTGGGCTCTCCAGACAGATCAGCCTaGCTACTGTTAAAGAGATCC | + |
Preference number: 5 (lower is better) Translates to: NKGQKSQARQACLRNLGSPDRSA*LLLKRS Trigger: GGATCTCTTTAACAGTAGCAAGGCTGATCTGTCTGG...AGAGCCCAGGTTACGAAGACAAGCTTGCCTCGCCTGACTTTTCTGTCCCTTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS GCA 90 bp | TTTTCCTTCTGTCTGTCCTTTGACCCACTGGTTTATGGTCTTCCTTaGATCTTCAGAGGCATGCTGAAAATCCACACTGGCCAGGTCAGC | + |
Preference number: 5 (lower is better) Translates to: FSFCLSFDPLVYGLP*IFRGMLKIHTGQVS Trigger: GCTGACCTGGCCAGTGTGGATTTTCAGCATGCCTCTGAAGATGCAAGGAAGACCATAAACCAGTGGGTCAAAGGACAGACAGAAGGAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000380739.6 ENST00000468511.5 ENST00000476896.5 ENST00000490094.5 |
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CDS-3UTR CAA 90 bp | TCTCCCCACACAGCCTTGGAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGATGTTTCCAGCCGGATaGTTCTCACTCAACGCCAGG | + |
Preference number: 5 (lower is better) Translates to: SPHTALEVKSLNQKTHEKMFPAG*FSLNAR Trigger: CCTGGCGTTGAGTGAGAACAATCCGGCTGGAAACAT...CTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTCCAAGGCTGTGTGGGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR CAA 90 bp | CACACAGCCTTGGAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGGCCAGGTTGAAATGGAAAGTCTaGGACAGCTGTGCTGCCGTG | + |
Preference number: 5 (lower is better) Translates to: HTALEVKSLNQKTHEKARLKWKV*DSCAAV Trigger: CACGGCAGCACAGCTGTCCAAGACTTTCCATTTCAA...CCTGGCCTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTCCAAGGCTGTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR CAA 90 bp | CAGAATACTAATCCTGCAGAACAAGGGACAGAAAAGTCAGGCGAGGCAAGCTTGGGTTTATGGTCTTCCTaGCATCTTCAGAGGCATGCT | + |
Preference number: 5 (lower is better) Translates to: QNTNPAEQGTEKSGEASLGLWSS*HLQRHA Trigger: AGCATGCCTCTGAAGATGCAAGGAAGACCATAAACC...CAAGCTTGCCTCGCCTGACTTTTCTGTCCCTTGTTCTGCAGGATTAGTATTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR CAA 90 bp | GAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGGCCAGGCATGGTAGCTCACCTTCTGTCTGTCCTTaGACCCACTGGTTTATGGTC | + |
Preference number: 5 (lower is better) Translates to: EVKSLNQKTHEKARHGSSPSVCP*THWFMV Trigger: GACCATAAACCAGTGGGTCAAAGGACAGACAGAAGG...TGAGCTACCATGCCTGGCCTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR CAA 90 bp | TCTCCCCACACAGCCTTGGAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGTCTCCCCACACAGCCTaGGAAGTCAAGAGCCTTAAT | + |
Preference number: 5 (lower is better) Translates to: SPHTALEVKSLNQKTHEKSPHTA*EVKSLN Trigger: ATTAAGGCTCTTGACTTCCAAGGCTGTGTGGGGAGA...CTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTCCAAGGCTGTGTGGGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR CAA 90 bp | TCTCCCCACACAGCCTTGGAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGAACCTGGGCTCTCAATaGGGGTGCTCTCTTACATTT | + |
Preference number: 5 (lower is better) Translates to: SPHTALEVKSLNQKTHEKNLGSQ*GCSLTF Trigger: AAATGTAAGAGAGCACCCCAATTGAGAGCCCAGGTT...CTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTCCAAGGCTGTGTGGGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR CAA 90 bp | ATAAATGACCATCTTATCATGTTTTCCCATGGCTATCAGGAGGATATAGCAATTAGGCGAAGCGGGTGTTaGCTGAGCTCAGCTGCTCCA | + |
Preference number: 5 (lower is better) Translates to: INDHLIMFSHGYQEDIAIRRSGC*LSSAAP Trigger: TGGAGCAGCTGAGCTCAGCAAACACCCGCTTCGCCT...AATTGCTATATCCTCCTGATAGCCATGGGAAAACATGATAAGATGGTCATTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR CAA 90 bp | TCTCCCCACACAGCCTTGGAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGACCTCTTCAACCGTGTaGAAATGGAAAGTCTTGGAC | + |
Preference number: 5 (lower is better) Translates to: SPHTALEVKSLNQKTHEKTSSTV*KWKVLD Trigger: GTCCAAGACTTTCCATTTCAACACGGTTGAAGAGGT...CTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTCCAAGGCTGTGTGGGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS TCA 90 bp | GCTCCACGTTTGTTGATATCAGCATTCAGACTCTGGAATCTTGAATaGACCTCTTCAACCGTGTTGAAATGGAAAGTCTTGGACAGCTGT | + |
Preference number: 5 (lower is better) Translates to: APRLLISAFRLWNLE*TSSTVLKWKVLDSC Trigger: ACAGCTGTCCAAGACTTTCCATTTCAACACGGTTGAAGAGGTTCATTCAAGATTCCAGAGTCTGAATGCTGATATCAACAAACGTGGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000380739.6 ENST00000460260.1 ENST00000476896.5 ENST00000490094.5 |
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CDS TCA 90 bp | AGACGCTCCACGTTTGTTGATATCAGCATTCAGACTCTGGAATCTTaGATGAACCTCTTCAACCGTGTTGAAATGGAAAGTCTTGGACAG | + |
Preference number: 5 (lower is better) Translates to: RRSTFVDISIQTLES*MNLFNRVEMESLGQ Trigger: CTGTCCAAGACTTTCCATTTCAACACGGTTGAAGAGGTTCATTCAAGATTCCAGAGTCTGAATGCTGATATCAACAAACGTGGAGCGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000380739.6 ENST00000460260.1 ENST00000476896.5 ENST00000490094.5 |
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CDS-3UTR CAA 90 bp | CACACAGCCTTGGAAGTCAAGAGCCTTAATCAGAAAACACATGAGAAGGCCAGGTTTACTAGCACAAGTTaGGTCATGTTATCAACCATG | + |
Preference number: 5 (lower is better) Translates to: HTALEVKSLNQKTHEKARFTSTS*VMLSTM Trigger: CATGGTTGATAACATGACCAAACTTGTGCTAGTAAA...CCTGGCCTTCTCATGTGTTTTCTGATTAAGGCTCTTGACTTCCAAGGCTGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS GCA 90 bp | AATAGATGGCATTTACTAGCACAAGTTTGGTCATGTTATCAACCATaGCCGAAGCCAACAGTTCCGGAATTTTTCCTTCTGTCTGTCCTT | + |
Preference number: 5 (lower is better) Translates to: NRWHLLAQVWSCYQP*PKPTVPEFFLLSVL Trigger: AAGGACAGACAGAAGGAAAAATTCCGGAACTGTTGGCTTCGGGCATGGTTGATAACATGACCAAACTTGTGCTAGTAAATGCCATCTATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000380739.6 ENST00000468511.5 ENST00000476896.5 ENST00000490094.5 |
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CDS CCA 90 bp | AGGATGCTACCTGAGGAATTATGCCGAATAAAGAAAAGGAATGGATaGTCGGCAGTGAAATTTTCTTCGGGCATCAACATGCAGAAAGTT | + |
Preference number: 5 (lower is better) Translates to: RMLPEELCRIKKRNG*SAVKFSSGINMQKV Trigger: AACTTTCTGCATGTTGATGCCCGAAGAAAATTTCACTGCCGACCATCCATTCCTTTTCTTTATTCGGCATAATTCCTCAGGTAGCATCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS GCA 90 bp | ACATTAACTTCAATGAAATCGAGATTCTCAGGTTTAGTCCACTCATaGAACTTTTCCAAAGTCAACTGTTCCTCAATCTTCTTCAGGCCC | + |
Preference number: 5 (lower is better) Translates to: TLTSMKSRFSGLVHS*NFSKVNCSSIFFRP Trigger: GGGCCTGAAGAAGATTGAGGAACAGTTGACTTTGGAAAAGTTGCATGAGTGGACTAAACCTGAGAATCTCGATTTCATTGAAGTTAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS-3UTR CAA 90 bp | ATAAATGACCATCTTATCATGTTTTCCCATGGCTATCAGGAGGATATAGCAATTGACGCTCCACGTTTGTaGATATCAGCATTCAGACTC | + |
Preference number: 5 (lower is better) Translates to: INDHLIMFSHGYQEDIAIDAPRL*ISAFRL Trigger: GAGTCTGAATGCTGATATCAACAAACGTGGAGCGTC...AATTGCTATATCCTCCTGATAGCCATGGGAAAACATGATAAGATGGTCATTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS CCA 72 bp | CCGACAGGCCGCCGAGGCACGCTCCGGGCTCCGAGCTaGGTGCGAGGTCAGGAAGGAGGCACCGAGGGCCGC | + |
Preference number: 6 (lower is better) Translates to: PTGRRGTLRAPS*VRGQEGGTEGR Trigger: GCGGCCCTCGGTGCCTCCTTCCTGACCTCGCACCCAGCTCGGAGCCCGGAGCGTGCCTCGGCGGCCTGTCGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490094.5 |
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CDS GCA 72 bp | TGGGTGCGAGGTCAGGAAGGAGGCACCGAGGGCCGCTaGTCTTATAGCAGGCGGAAGCGTCACCCGGGCCAG | + |
Preference number: 6 (lower is better) Translates to: WVRGQEGGTEGR*SYSRRKRHPGQ Trigger: CTGGCCCGGGTGACGCTTCCGCCTGCTATAAGAGCAGCGGCCCTCGGTGCCTCCTTCCTGACCTCGCACCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000490094.5 |
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CDS CCA 72 bp | TCCCTGCAGCTGCAGATAGGAGCCGCGGCCTGGCCCTaGGCTGCCTGGAAACCGTCACAAACAGCTCCGACA | + |
Preference number: 6 (lower is better) Translates to: SLQLQIGAAAWP*AAWKPSQTAPT Trigger: TGTCGGAGCTGTTTGTGACGGTTTCCAGGCAGCCCAGGGCCAGGCCGCGGCTCCTATCTGCAGCTGCAGGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476896.5 |
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CDS TCA 72 bp | CGCCAGGAACAGGTCCAAGGCGAAGCGGGTGTTTGCTaGGCTCAGCTGCTCCATGGTGAAAACCAGGCGGGG | + |
Preference number: 6 (lower is better) Translates to: RQEQVQGEAGVC*AQLLHGENQAG Trigger: CCCCGCCTGGTTTTCACCATGGAGCAGCTGAGCTCAGCAAACACCCGCTTCGCCTTGGACCTGTTCCTGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460260.1 |
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CDS GCA 72 bp | AGGTCCAAGGCGAAGCGGGTGTTTGCTGAGCTCAGCTaGTCCATGGTGAAAACCGACAGGCCGCCGAGGCAC | + |
Preference number: 6 (lower is better) Translates to: RSKAKRVFAELS*SMVKTDRPPRH Trigger: GTGCCTCGGCGGCCTGTCGGTTTTCACCATGGAGCAGCTGAGCTCAGCAAACACCCGCTTCGCCTTGGACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS TCA 72 bp | CGCCAGGAACAGGTCCAAGGCGAAGCGGGTGTTTGCTaGGCTCAGCTGCTCCATGGTGAAAACCGACAGGCC | + |
Preference number: 6 (lower is better) Translates to: RQEQVQGEAGVC*AQLLHGENRQA Trigger: GGCCTGTCGGTTTTCACCATGGAGCAGCTGAGCTCAGCAAACACCCGCTTCGCCTTGGACCTGTTCCTGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS GCA 72 bp | AGGTCCAAGGCGAAGCGGGTGTTTGCTGAGCTCAGCTaGTCCATGGTGAAAACACAGTCCAGGGTCTGGCCG | + |
Preference number: 6 (lower is better) Translates to: RSKAKRVFAELS*SMVKTQSRVWP Trigger: CGGCCAGACCCTGGACTGTGTTTTCACCATGGAGCAGCTGAGCTCAGCAAACACCCGCTTCGCCTTGGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476896.5 |
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CDS GCA 72 bp | CCAGACAGATCAGCCTTGCTACTGTTAAAGAGATCCTaGACACCTAGGCGGGCGAGGTCGGAGTTGAGAGTG | + |
Preference number: 6 (lower is better) Translates to: PDRSALLLLKRS*TPRRARSELRV Trigger: CACTCTCAACTCCGACCTCGCCCGCCTAGGTGTGCAGGATCTCTTTAACAGTAGCAAGGCTGATCTGTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS GCA 72 bp | TTCTTCGGGCATCAACATGCAGAAAGTTGCGATGCCTaGTGTGGCAGCTGCCGCCTCTGTTCCCTCTTCATT | + |
Preference number: 6 (lower is better) Translates to: FFGHQHAESCDA*CGSCRLCSLFI Trigger: AATGAAGAGGGAACAGAGGCGGCAGCTGCCACAGCAGGCATCGCAACTTTCTGCATGTTGATGCCCGAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380739.6 |
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CDS GCA 72 bp | TTCCCCCGAGGACAGGCAAAGAAGAACCGTGCTGGCTaGTCGGCATGTAAGCACAAAGCTGATTTCTCCTTG | + |
Preference number: 6 (lower is better) Translates to: FPRGQAKKNRAG*SACKHKADFSL Trigger: CAAGGAGAAATCAGCTTTGTGCTTACATGCCGAGCAGCCAGCACGGTTCTTCTTTGCCTGTCCTCGGGGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000476896.5 |
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CDS CAA 90 bp | GCAGATGAAATGCTGAAGGGAGAGATGAAGATGTTTCCAGCCGGATaGTTCTCACTCAACGCCAGGAACAGGTCCAAGGCGAAGCGGGTG | + |
Preference number: 6 (lower is better) Translates to: ADEMLKGEMKMFPAG*FSLNARNRSKAKRV Trigger: CACCCGCTTCGCCTTGGACCTGTTCCTGGCGTTGAGTGAGAACAATCCGGCTGGAAACATCTTCATCTCTCCCTTCAGCATTTCATCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380739.6 ENST00000460260.1 ENST00000476896.5 |
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CDS CAA 72 bp | ATGCTGAAGGGAGAGATGAAGATGTTTCCAGCCGGATaGTTCTCACTCAACGCCAGGAACAGGTCCAAGGCG | + |
Preference number: 6 (lower is better) Translates to: MLKGEMKMFPAG*FSLNARNRSKA Trigger: CGCCTTGGACCTGTTCCTGGCGTTGAGTGAGAACAATCCGGCTGGAAACATCTTCATCTCTCCCTTCAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000380739.6 ENST00000460260.1 ENST00000476896.5 |
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CDS TCA 72 bp | GACTCTGGAATCTTGAATGAACCTCTTCAACCGTGTTaGAATGGAAAGTCTTGGACAGCTGTGCTGCCGTGT | + |
Preference number: 6 (lower is better) Translates to: DSGILNEPLQPC*NGKSWTAVLPC Trigger: ACACGGCAGCACAGCTGTCCAAGACTTTCCATTTCAACACGGTTGAAGAGGTTCATTCAAGATTCCAGAGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000380739.6 ENST00000460260.1 ENST00000476896.5 ENST00000490094.5 |
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CDS CCA 72 bp | TCCGGAATTTTTCCTTCTGTCTGTCCTTTGACCCACTaGTTTATGGTCTTCCTTGCATCTTCAGAGGCATGC | + |
Preference number: 6 (lower is better) Translates to: SGIFPSVCPLTH*FMVFLASSEAC Trigger: GCATGCCTCTGAAGATGCAAGGAAGACCATAAACCAGTGGGTCAAAGGACAGACAGAAGGAAAAATTCCGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000380739.6 ENST00000468511.5 ENST00000476896.5 ENST00000490094.5 |
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CDS CAA 72 bp | GCCAACAGTTCCGGAATTTTTCCTTCTGTCTGTCCTTaGACCCACTGGTTTATGGTCTTCCTTGCATCTTCA | + |
Preference number: 6 (lower is better) Translates to: ANSSGIFPSVCP*THWFMVFLASS Trigger: TGAAGATGCAAGGAAGACCATAAACCAGTGGGTCAAAGGACAGACAGAAGGAAAAATTCCGGAACTGTTGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000380739.6 ENST00000468511.5 ENST00000476896.5 ENST00000490094.5 |
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CDS GCA 72 bp | CATTTACTAGCACAAGTTTGGTCATGTTATCAACCATaGCCGAAGCCAACAGTTCCGGAATTTTTCCTTCTG | + |
Preference number: 6 (lower is better) Translates to: HLLAQVWSCYQP*PKPTVPEFFLL Trigger: CAGAAGGAAAAATTCCGGAACTGTTGGCTTCGGGCATGGTTGATAACATGACCAAACTTGTGCTAGTAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000380739.6 ENST00000468511.5 ENST00000476896.5 ENST00000490094.5 |
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CDS GCA 72 bp | TCAATGAAATCGAGATTCTCAGGTTTAGTCCACTCATaGAACTTTTCCAAAGTCAACTGTTCCTCAATCTTC | + |
Preference number: 6 (lower is better) Translates to: SMKSRFSGLVHS*NFSKVNCSSIF Trigger: GAAGATTGAGGAACAGTTGACTTTGGAAAAGTTGCATGAGTGGACTAAACCTGAGAATCTCGATTTCATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380739.6 |