RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SERPINA5 (Homo sapiens)

Ensembl gene IDs: ENSG00000188488

Ensembl transcript IDs: ENST00000329597.12, ENST00000553511.1, ENST00000553780.5, ENST00000554220.5, ENST00000554276.1, ENST00000554633.5, ENST00000554866.5, ENST00000555681.1, ENST00000556064.1, ENST00000556730.1, ENST00000556775.5, ENST00000557598.1

Found 407 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTGAAATCAACCACGAATGACAGGGCCCACCCCAGCCTTTCTATATaGTTTCAGGAGTTCTTGGGTCACAGCAAGAATCTGATCCTTGTA +
Preference number: 1 (lower is better)
Translates to: LKSTTNDRAHPSLSI*FQEFLGHSKNLILV
Trigger: TACAAGGATCAGATTCTTGCTGTGACCCAAGAACTCCTGAAATCATATAGAAAGGCTGGGGTGGGCCCTGTCATTCGTGGTTGATTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
3UTR GCA 90 bp GGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTaGAGTCGTGTGGGTGGAAGCAATCATCATAGAGTAATATTATTT +
Preference number: 1 (lower is better)
Translates to: GKIECSPHFPKAPVC*SRVGGSNHHRVILF
Trigger: AAATAATATTACTCTATGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
3UTR TCA 90 bp AATGCCAACATAGAATTCAAAAAGTTAGTCATTGGCACCTGCAACTaGTACTCTACTATTTGCAAAAGGCTTCCCTTCTTCCACTCCCAG +
Preference number: 1 (lower is better)
Translates to: NANIEFKKLVIGTCN*YSTICKRLPFFHSQ
Trigger: CTGGGAGTGGAAGAAGGGAAGCCTTTTGCAAATAGTAGAGTATCAGTTGCAGGTGCCAATGACTAACTTTTTGAATTCTATGTTGGCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
3UTR-3UTR GCA 90 bp TGGACCTGTGCTTCCTGGTGGCCCTCATCCACTGGAACATCCCTCCTATTGAGCAAGGCACCTGTATGTTaGAGTCGTGTGGGTGGAAGC +
Preference number: 2 (lower is better)
Translates to: WTCASWWPSSTGTSLLLSKAPVC*SRVGGS
Trigger: GCTTCCACCCACACGACTGCAACATACAGGTGCCTT...GCTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCACCAGGAAGCACAGGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
3UTR-3UTR CCA 90 bp GATGAACTGACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGTTTGTGGCACTGAGCTaGGCATCAAGGGCCAGGACT +
Preference number: 2 (lower is better)
Translates to: DELTVVAADKCGTSLGPVFVALS*ASRART
Trigger: AGTCCTGGCCCTTGATGCCCAGCTCAGTGCCACAAA...CACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGTCAGTTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
3UTR-3UTR CCA 90 bp ACTGGAACATCCCTCCTATTGAGCTTTGTGGCACTGAGCTGGGCATCAAGGGCCTATGTTGCAGTCGTGTaGGTGGAAGCAATCATCATA +
Preference number: 2 (lower is better)
Translates to: TGTSLLLSFVALSWASRAYVAVV*VEAIII
Trigger: TATGATGATTGCTTCCACCCACACGACTGCAACATA...GGCCCTTGATGCCCAGCTCAGTGCCACAAAGCTCAATAGGAGGGATGTTCCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
3UTR-3UTR CCA 90 bp ACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTCCAACACAAGGGCCAGGACTCTaGACCTCTCTTTGCCACTAC +
Preference number: 2 (lower is better)
Translates to: TQHIRTETVAPFQTPIPTQGPGL*TSLCHY
Trigger: GTAGTGGCAAAGAGAGGTCCAGAGTCCTGGCCCTTG...TGTTGGAATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
3UTR-3UTR CCA 90 bp TCATTGGCACCTGCAACTGATACTCTACTATTTGCAAAAGGCTTCCCTTCTTCCTTTGTGGCACTGAGCTaGGCATCAAGGGCCAGGACT +
Preference number: 2 (lower is better)
Translates to: SLAPATDTLLFAKGFPSSFVALS*ASRART
Trigger: AGTCCTGGCCCTTGATGCCCAGCTCAGTGCCACAAA...GGAAGAAGGGAAGCCTTTTGCAAATAGTAGAGTATCAGTTGCAGGTGCCAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
3UTR-3UTR GCA 90 bp AATGTCACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTAAGGCACCTGTATGTTaGAGTCGTGTGGGTGGAAGC +
Preference number: 2 (lower is better)
Translates to: NVTQHIRTETVAPFQTPIKAPVC*SRVGGS
Trigger: GCTTCCACCCACACGACTGCAACATACAGGTGCCTT...AATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
3UTR-3UTR GCA 90 bp CAAAAAGTTAGTCATTGGCACCTGCAACTGATACTCTACTATTTGCAAAAGGCTCCAGCCTTGGACCTGTaGTTCCTGGTGGCCCTCATC +
Preference number: 2 (lower is better)
Translates to: QKVSHWHLQLILYYLQKAPALDL*FLVALI
Trigger: GATGAGGGCCACCAGGAAGCACAGGTCCAAGGCTGG...AGCCTTTTGCAAATAGTAGAGTATCAGTTGCAGGTGCCAATGACTAACTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
3UTR-3UTR CCA 90 bp CAGCCTTTCTATATGATTTCAGGAGTTCTTGGGTCACAGCAAGAATCTGATCCTTTTGTGGCACTGAGCTaGGCATCAAGGGCCAGGACT +
Preference number: 2 (lower is better)
Translates to: QPFYMISGVLGSQQESDPFVALS*ASRART
Trigger: AGTCCTGGCCCTTGATGCCCAGCTCAGTGCCACAAA...AGGATCAGATTCTTGCTGTGACCCAAGAACTCCTGAAATCATATAGAAAGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
3UTR-3UTR CCA 90 bp GGAAAGTGTTGTCCCAATGTCACACAGCACATTAGGACTGAAACAGTAGCCCCATATGTTGCAGTCGTGTaGGTGGAAGCAATCATCATA +
Preference number: 2 (lower is better)
Translates to: GKCCPNVTQHIRTETVAPYVAVV*VEAIII
Trigger: TATGATGATTGCTTCCACCCACACGACTGCAACATA...TGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGACATTGGGACAACACTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
3UTR-3UTR CCA 90 bp ACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTCCAACATATGTTGCAGTCGTGTaGGTGGAAGCAATCATCATA +
Preference number: 2 (lower is better)
Translates to: TQHIRTETVAPFQTPIPTYVAVV*VEAIII
Trigger: TATGATGATTGCTTCCACCCACACGACTGCAACATA...TGTTGGAATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
3UTR-3UTR CCA 90 bp TTCTATATGATTTCAGGAGTTCTTGGGTCACAGCAAGAATCTGATCCTTGTATACAAGGGCCAGGACTCTaGACCTCTCTTTGCCACTAC +
Preference number: 2 (lower is better)
Translates to: FYMISGVLGSQQESDPCIQGPGL*TSLCHY
Trigger: GTAGTGGCAAAGAGAGGTCCAGAGTCCTGGCCCTTG...TATACAAGGATCAGATTCTTGCTGTGACCCAAGAACTCCTGAAATCATATAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
3UTR-3UTR CCA 90 bp TTCTATATGATTTCAGGAGTTCTTGGGTCACAGCAAGAATCTGATCCTTGTATAGTGGCCCTCATCCACTaGAACATCCCTCCTATTGAG +
Preference number: 2 (lower is better)
Translates to: FYMISGVLGSQQESDPCIVALIH*NIPPIE
Trigger: CTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCAC...TATACAAGGATCAGATTCTTGCTGTGACCCAAGAACTCCTGAAATCATATAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
3UTR-3UTR TCA 90 bp CAAAAAGTTAGTCATTGGCACCTGCAACTGATACTCTACTATTTGCAAAAGGCTGTCACAGCAAGAATCTaGTCCTTGTATACAGAGGGA +
Preference number: 2 (lower is better)
Translates to: QKVSHWHLQLILYYLQKAVTARI*SLYTEG
Trigger: TCCCTCTGTATACAAGGATCAGATTCTTGCTGTGAC...AGCCTTTTGCAAATAGTAGAGTATCAGTTGCAGGTGCCAATGACTAACTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
3UTR GCA 72 bp TTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTaGTTCCTGGTGGCCCTCATCCACTGGAACATCCCT +
Preference number: 3 (lower is better)
Translates to: LLLISVGPALDL*FLVALIHWNIP
Trigger: AGGGATGTTCCAGTGGATGAGGGCCACCAGGAAGCACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
3UTR CCA 72 bp GCCTTGGACCTGTGCTTCCTGGTGGCCCTCATCCACTaGAACATCCCTCCTATTGAGCTTTGTGGCACTGAG +
Preference number: 3 (lower is better)
Translates to: ALDLCFLVALIH*NIPPIELCGTE
Trigger: CTCAGTGCCACAAAGCTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCACCAGGAAGCACAGGTCCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
3UTR-3UTR CAA 90 bp TGGACCTGTGCTTCCTGGTGGCCCTCATCCACTGGAACATCCCTCCTATTGAGCACCATGCTGGTGAACTaGAGCAAGTCATCCAGCCTC +
Preference number: 3 (lower is better)
Translates to: WTCASWWPSSTGTSLLLSTMLVN*SKSSSL
Trigger: GAGGCTGGATGACTTGCTCAAGTTCACCAGCATGGT...GCTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCACCAGGAAGCACAGGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
3UTR GCA 72 bp GCTGGGCATCAAGGGCCAGGACTCTGGACCTCTCTTTaGCACTACCATGCTGGTGAACTTGAGCAAGTCATC +
Preference number: 3 (lower is better)
Translates to: AGHQGPGLWTSL*HYHAGELEQVI
Trigger: GATGACTTGCTCAAGTTCACCAGCATGGTAGTGGCAAAGAGAGGTCCAGAGTCCTGGCCCTTGATGCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
3UTR CCA 72 bp GGAACATCCCTCCTATTGAGCTTTGTGGCACTGAGCTaGGCATCAAGGGCCAGGACTCTGGACCTCTCTTTG +
Preference number: 3 (lower is better)
Translates to: GTSLLLSFVALS*ASRARTLDLSL
Trigger: CAAAGAGAGGTCCAGAGTCCTGGCCCTTGATGCCCAGCTCAGTGCCACAAAGCTCAATAGGAGGGATGTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
3UTR-3UTR CAA 90 bp ACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGCTTCCTGGTCAAGGCACCTGTATGTaGCAGTCGTGTGGGTGGAAG +
Preference number: 3 (lower is better)
Translates to: TVVAADKCGTSLGPVLPGQGTCM*QSCGWK
Trigger: CTTCCACCCACACGACTGCAACATACAGGTGCCTTG...ACCAGGAAGCACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
3UTR-3UTR CAA 90 bp GGACCTCTCTTTGCCACTACCATGCTGGTGAACTTGAGCAAGTCATCCAGCCTCCAAGGCACCTGTATGTaGCAGTCGTGTGGGTGGAAG +
Preference number: 3 (lower is better)
Translates to: GPLFATTMLVNLSKSSSLQGTCM*QSCGWK
Trigger: CTTCCACCCACACGACTGCAACATACAGGTGCCTTG...GAGGCTGGATGACTTGCTCAAGTTCACCAGCATGGTAGTGGCAAAGAGAGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
3UTR-3UTR CAA 90 bp GATGAACTGACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGGGAACATCCCTCCTATaGAGCTTTGTGGCACTGAGC +
Preference number: 3 (lower is better)
Translates to: DELTVVAADKCGTSLGPVGTSLL*SFVALS
Trigger: GCTCAGTGCCACAAAGCTCAATAGGAGGGATGTTCC...CACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGTCAGTTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
3UTR-3UTR CAA 90 bp ACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTCCAACAAGTGTGGGACCAGCCTaGGACCTGTGCTTCCTGGTG +
Preference number: 3 (lower is better)
Translates to: TQHIRTETVAPFQTPIPTSVGPA*DLCFLV
Trigger: CACCAGGAAGCACAGGTCCAAGGCTGGTCCCACACT...TGTTGGAATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
3UTR-3UTR CAA 90 bp AACAGTAGCCCCATTTCAGACTCCCATTCCAACATTTTTCCCATGCAGGATGAAAGTGTGGGACCAGCCTaGGACCTGTGCTTCCTGGTG +
Preference number: 3 (lower is better)
Translates to: NSSPISDSHSNIFPMQDESVGPA*DLCFLV
Trigger: CACCAGGAAGCACAGGTCCAAGGCTGGTCCCACACT...TTCATCCTGCATGGGAAAAATGTTGGAATGGGAGTCTGAAATGGGGCTACTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
3UTR-3UTR CAA 90 bp ACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTCCAACACAAGGCACCTGTATGTaGCAGTCGTGTGGGTGGAAG +
Preference number: 3 (lower is better)
Translates to: TQHIRTETVAPFQTPIPTQGTCM*QSCGWK
Trigger: CTTCCACCCACACGACTGCAACATACAGGTGCCTTG...TGTTGGAATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
3UTR TCA 72 bp ACCACGAATGACAGGGCCCACCCCAGCCTTTCTATATaGTTTCAGGAGTTCTTGGGTCACAGCAAGAATCTG +
Preference number: 3 (lower is better)
Translates to: TTNDRAHPSLSI*FQEFLGHSKNL
Trigger: CAGATTCTTGCTGTGACCCAAGAACTCCTGAAATCATATAGAAAGGCTGGGGTGGGCCCTGTCATTCGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
3UTR-3UTR CAA 90 bp AATGTCACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTGGAACATCCCTCCTATaGAGCTTTGTGGCACTGAGC +
Preference number: 3 (lower is better)
Translates to: NVTQHIRTETVAPFQTPIGTSLL*SFVALS
Trigger: GCTCAGTGCCACAAAGCTCAATAGGAGGGATGTTCC...AATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
3UTR-3UTR CAA 90 bp GTTAGTCATTGGCACCTGCAACTGATACTCTACTATTTGCAAAAGGCTTCCCTTACCATGCTGGTGAACTaGAGCAAGTCATCCAGCCTC +
Preference number: 3 (lower is better)
Translates to: VSHWHLQLILYYLQKASLTMLVN*SKSSSL
Trigger: GAGGCTGGATGACTTGCTCAAGTTCACCAGCATGGT...AAGGGAAGCCTTTTGCAAATAGTAGAGTATCAGTTGCAGGTGCCAATGACTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
3UTR GCA 72 bp GAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTaGAGTCGTGTGGGTGGAAGCAATCATCATAGAGTA +
Preference number: 3 (lower is better)
Translates to: ECSPHFPKAPVC*SRVGGSNHHRV
Trigger: TACTCTATGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
3UTR-3UTR CAA 90 bp TTCCCTTCTTCCACTCCCAGCCAGGCCCATCAGATTATAACTATATCCACAAAATGGGCCATTTCCACCTaGATATCCAGATGTTTTTCT +
Preference number: 3 (lower is better)
Translates to: FPSSTPSQAHQIITISTKWAIST*ISRCFS
Trigger: AGAAAAACATCTGGATATCAAGGTGGAAATGGCCCA...TTTTGTGGATATAGTTATAATCTGATGGGCCTGGCTGGGAGTGGAAGAAGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
3UTR-3UTR CAA 90 bp TTCCCTTCTTCCACTCCCAGCCAGGCCCATCAGATTATAACTATATCCACAAAAAAGGATGAATGGCACTaGAGTGTATTGAAATCAACC +
Preference number: 3 (lower is better)
Translates to: FPSSTPSQAHQIITISTKKDEWH*SVLKST
Trigger: GGTTGATTTCAATACACTCAAGTGCCATTCATCCTT...TTTTGTGGATATAGTTATAATCTGATGGGCCTGGCTGGGAGTGGAAGAAGGGAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
3UTR TCA 72 bp ATAGAATTCAAAAAGTTAGTCATTGGCACCTGCAACTaGTACTCTACTATTTGCAAAAGGCTTCCCTTCTTC +
Preference number: 3 (lower is better)
Translates to: IEFKKLVIGTCN*YSTICKRLPFF
Trigger: GAAGAAGGGAAGCCTTTTGCAAATAGTAGAGTATCAGTTGCAGGTGCCAATGACTAACTTTTTGAATTCTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp TTAGCCCCCTTCATCTCCCACCCTGAGGCCTGTAGATTTCAGGAGAAGCCCCACCCCCGTGGCTGCCGCTaGTCTGGTTCCCGACTCGTC +
Preference number: 4 (lower is better)
Translates to: LAPFISHPEACRFQEKPHPRGCR*SGSRLV
Trigger: GACGAGTCGGGAACCAGAGCAGCGGCAGCCACGGGG...GTGGGGCTTCTCCTGAAATCTACAGGCCTCAGGGTGGGAGATGAAGGGGGCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp TGTGCTTCCTGGTGGCCCTCATCCACTGGAACATCCCTCCTATTGAGCTTTGTGCCCCGTGGCTGCCGCTaGTCTGGTTCCCGACTCGTC +
Preference number: 4 (lower is better)
Translates to: CASWWPSSTGTSLLLSFVPRGCR*SGSRLV
Trigger: GACGAGTCGGGAACCAGAGCAGCGGCAGCCACGGGG...CACAAAGCTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCACCAGGAAGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp GGACCTCTCTTTGCCACTACCATGCTGGTGAACTTGAGCAAGTCATCCAGCCTCCCCCGTGGCTGCCGCTaGTCTGGTTCCCGACTCGTC +
Preference number: 4 (lower is better)
Translates to: GPLFATTMLVNLSKSSSLPRGCR*SGSRLV
Trigger: GACGAGTCGGGAACCAGAGCAGCGGCAGCCACGGGG...GAGGCTGGATGACTTGCTCAAGTTCACCAGCATGGTAGTGGCAAAGAGAGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp TTAGCCCCCTTCATCTCCCACCCTGAGGCCTGTAGATTTCAGGAGAAGCCCCACTGCTGGGGGCCACCGTaGCACCTACATGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LAPFISHPEACRFQEKPHCWGPP*HLHGGP
Trigger: AGGACCTCCATGTAGGTGCCACGGTGGCCCCCAGCA...GTGGGGCTTCTCCTGAAATCTACAGGCCTCAGGGTGGGAGATGAAGGGGGCTAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp TGGACCTGTGCTTCCTGGTGGCCCTCATCCACTGGAACATCCCTCCTATTGAGCCTACCACCAGGTCGGTaGAAAGGGCATTGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: WTCASWWPSSTGTSLLLSLPPGR*KGHCRG
Trigger: GCCTCGGCAATGCCCTTTTCACCGACCTGGTGGTAG...GCTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCACCAGGAAGCACAGGTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp TTAGCCCCCTTCATCTCCCACCCTGAGGCCTGTAGATTTCAGGAGAAGCCCCACCACTCTGTTCGCCCATaGCCTCTTCCCTGTGAGCCC +
Preference number: 4 (lower is better)
Translates to: LAPFISHPEACRFQEKPHHSVRP*PLPCEP
Trigger: GGGCTCACAGGGAAGAGGTCATGGGCGAACAGAGTG...GTGGGGCTTCTCCTGAAATCTACAGGCCTCAGGGTGGGAGATGAAGGGGGCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553780.5
CDS-3UTR GCA 90 bp GGACCTCTCTTTGCCACTACCATGCTGGTGAACTTGAGCAAGTCATCCAGCCTCGGACCCCCACCACCCTaGAGGAGAGGTTCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: GPLFATTMLVNLSKSSSLGPPPP*RRGSGP
Trigger: TGGACCGGAACCTCTCCTGCAGGGTGGTGGGGGTCC...GAGGCTGGATGACTTGCTCAAGTTCACCAGCATGGTAGTGGCAAAGAGAGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp TGGACCTGTGCTTCCTGGTGGCCCTCATCCACTGGAACATCCCTCCTATTGAGCTATTGTCCCCGTGGCTaGCGCTGCTCTGGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: WTCASWWPSSTGTSLLLSYCPRG*RCSGSR
Trigger: TCGGGAACCAGAGCAGCGGCAGCCACGGGGACAATA...GCTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCACCAGGAAGCACAGGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp AACATCCCTCCTATTGAGCTTTGTGGCACTGAGCTGGGCATCAAGGGCCAGGACAGTCCCTTCTGCTGCTaGGGGCCACCGTGGCACCTA +
Preference number: 4 (lower is better)
Translates to: NIPPIELCGTELGIKGQDSPFCC*GPPWHL
Trigger: TAGGTGCCACGGTGGCCCCCAGCAGCAGAAGGGACT...GTCCTGGCCCTTGATGCCCAGCTCAGTGCCACAAAGCTCAATAGGAGGGATGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp ATGGGCCATAGCTTAGCCCCCTTCATCTCCCACCCTGAGGCCTGTAGATTTCAGAGCTTTTCTGGAGGTTaGGGCCCAGGCCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: MGHSLAPFISHPEACRFQSFSGG*GPGPPG
Trigger: TCCTGGAGGGCCTGGGCCTCAACCTCCAGAAAAGCT...CTGAAATCTACAGGCCTCAGGGTGGGAGATGAAGGGGGCTAAGCTATGGCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp TTAGCCCCCTTCATCTCCCACCCTGAGGCCTGTAGATTTCAGGAGAAGCCCCACGAAATCAACCACGAATaGCAGGGCCCACCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LAPFISHPEACRFQEKPHEINHE*QGPPQP
Trigger: AGGCTGGGGTGGGCCCTGTCATTCGTGGTTGATTTC...GTGGGGCTTCTCCTGAAATCTACAGGCCTCAGGGTGGGAGATGAAGGGGGCTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp GATGAACTGACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGGGACCCCCACCACCCTaGAGGAGAGGTTCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: DELTVVAADKCGTSLGPVGPPPP*RRGSGP
Trigger: TGGACCGGAACCTCTCCTGCAGGGTGGTGGGGGTCC...CACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGTCAGTTCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp TGTGCTTCCTGGTGGCCCTCATCCACTGGAACATCCCTCCTATTGAGCTTTGTGAGTCCCTTCTGCTGCTaGGGGCCACCGTGGCACCTA +
Preference number: 4 (lower is better)
Translates to: CASWWPSSTGTSLLLSFVSPFCC*GPPWHL
Trigger: TAGGTGCCACGGTGGCCCCCAGCAGCAGAAGGGACT...CACAAAGCTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCACCAGGAAGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
3UTR CAA 72 bp TCCTGGTGGCCCTCATCCACTGGAACATCCCTCCTATaGAGCTTTGTGGCACTGAGCTGGGCATCAAGGGCC +
Preference number: 4 (lower is better)
Translates to: SWWPSSTGTSLL*SFVALSWASRA
Trigger: GGCCCTTGATGCCCAGCTCAGTGCCACAAAGCTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCACCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp ACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGCTTCCTGGTAGCTTTTCTGGAGGTTaGGGCCCAGGCCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TVVAADKCGTSLGPVLPGSFSGG*GPGPPG
Trigger: TCCTGGAGGGCCTGGGCCTCAACCTCCAGAAAAGCT...ACCAGGAAGCACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp TCACTAGCTACCAGCATACAGATGGGCCATAGCTTAGCCCCCTTCATCTCCCACCTACCACCAGGTCGGTaGAAAGGGCATTGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: SLATSIQMGHSLAPFISHLPPGR*KGHCRG
Trigger: GCCTCGGCAATGCCCTTTTCACCGACCTGGTGGTAG...GTGGGAGATGAAGGGGGCTAAGCTATGGCCCATCTGTATGCTGGTAGCTAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp ATGGGCCATAGCTTAGCCCCCTTCATCTCCCACCCTGAGGCCTGTAGATTTCAGGAAATCAACCACGAATaGCAGGGCCCACCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: MGHSLAPFISHPEACRFQEINHE*QGPPQP
Trigger: AGGCTGGGGTGGGCCCTGTCATTCGTGGTTGATTTC...CTGAAATCTACAGGCCTCAGGGTGGGAGATGAAGGGGGCTAAGCTATGGCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp ACTGGAACATCCCTCCTATTGAGCTTTGTGGCACTGAGCTGGGCATCAAGGGCCATGACCTCTTCCCTGTaGGCCCACAGGCACAGTCTG +
Preference number: 4 (lower is better)
Translates to: TGTSLLLSFVALSWASRAMTSSL*AHRHSL
Trigger: CAGACTGTGCCTGTGGGCTCACAGGGAAGAGGTCAT...GGCCCTTGATGCCCAGCTCAGTGCCACAAAGCTCAATAGGAGGGATGTTCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553780.5
CDS-3UTR GCA 90 bp TTCCCCAAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCATAGAGGACCCCCACCACCCTaGAGGAGAGGTTCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: FPKAPVCCSRVGGSNHHRGPPPP*RRGSGP
Trigger: TGGACCGGAACCTCTCCTGCAGGGTGGTGGGGGTCC...TCTATGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTTGGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp ACTGGAACATCCCTCCTATTGAGCTTTGTGGCACTGAGCTGGGCATCAAGGGCCACAAAGCCGTGGCATTaGCTTGGTAGGGGACCCCCA +
Preference number: 4 (lower is better)
Translates to: TGTSLLLSFVALSWASRATKPWH*LGRGPP
Trigger: TGGGGGTCCCCTACCAAGGCAATGCCACGGCTTTGT...GGCCCTTGATGCCCAGCTCAGTGCCACAAAGCTCAATAGGAGGGATGTTCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp TTGAGCTTTGTGGCACTGAGCTGGGCATCAAGGGCCAGGACTCTGGACCTCTCTCCATTCTCCACCTGCTaGATCTTTCCCTCACTGGGG +
Preference number: 4 (lower is better)
Translates to: LSFVALSWASRARTLDLSPFSTC*IFPSLG
Trigger: CCCCAGTGAGGGAAAGATGCAGCAGGTGGAGAATGG...AGAGAGGTCCAGAGTCCTGGCCCTTGATGCCCAGCTCAGTGCCACAAAGCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp TCACTAGCTACCAGCATACAGATGGGCCATAGCTTAGCCCCCTTCATCTCCCACCCAGCCTTGGACCTGTaGTTCCTGGTGGCCCTCATC +
Preference number: 4 (lower is better)
Translates to: SLATSIQMGHSLAPFISHPALDL*FLVALI
Trigger: GATGAGGGCCACCAGGAAGCACAGGTCCAAGGCTGG...GTGGGAGATGAAGGGGGCTAAGCTATGGCCCATCTGTATGCTGGTAGCTAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp TGTGCTTCCTGGTGGCCCTCATCCACTGGAACATCCCTCCTATTGAGCTTTGTGCCAGCCTTGGACCTGTaGTTCCTGGTGGCCCTCATC +
Preference number: 4 (lower is better)
Translates to: CASWWPSSTGTSLLLSFVPALDL*FLVALI
Trigger: GATGAGGGCCACCAGGAAGCACAGGTCCAAGGCTGG...CACAAAGCTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCACCAGGAAGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp GATGAACTGACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGTGCTGGGGGCCACCGTaGCACCTACATGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: DELTVVAADKCGTSLGPVCWGPP*HLHGGP
Trigger: AGGACCTCCATGTAGGTGCCACGGTGGCCCCCAGCA...CACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGTCAGTTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp ATGGGCCATAGCTTAGCCCCCTTCATCTCCCACCCTGAGGCCTGTAGATTTCAGTCTGCATCTTTGTGCTaGACCCAGCCCCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: MGHSLAPFISHPEACRFQSASLC*TQPPGR
Trigger: TCTCCCTGGGGGCTGGGTCCAGCACAAAGATGCAGA...CTGAAATCTACAGGCCTCAGGGTGGGAGATGAAGGGGGCTAAGCTATGGCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp TGGACCTCTCTTTGCCACTACCATGCTGGTGAACTTGAGCAAGTCATCCAGCCTTGGCTGCCGCTGCTCTaGTTCCCGACTCGTCCACCT +
Preference number: 4 (lower is better)
Translates to: WTSLCHYHAGELEQVIQPWLPLL*FPTRPP
Trigger: AGGTGGACGAGTCGGGAACCAGAGCAGCGGCAGCCA...AGGCTGGATGACTTGCTCAAGTTCACCAGCATGGTAGTGGCAAAGAGAGGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp TGGACCTGTGCTTCCTGGTGGCCCTCATCCACTGGAACATCCCTCCTATTGAGCCAAGGGCCAGGACTCTaGACCTCTCTTTGCCACTAC +
Preference number: 4 (lower is better)
Translates to: WTCASWWPSSTGTSLLLSQGPGL*TSLCHY
Trigger: GTAGTGGCAAAGAGAGGTCCAGAGTCCTGGCCCTTG...GCTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCACCAGGAAGCACAGGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp ACTGGAACATCCCTCCTATTGAGCTTTGTGGCACTGAGCTGGGCATCAAGGGCCCATCTCTGGGCTGGTTaGGTTCCTGAAGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TGTSLLLSFVALSWASRAHLWAG*VPEGAA
Trigger: AGCAGCTCCTTCAGGAACTCAACCAGCCCAGAGATG...GGCCCTTGATGCCCAGCTCAGTGCCACAAAGCTCAATAGGAGGGATGTTCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp AACATCCCTCCTATTGAGCTTTGTGGCACTGAGCTGGGCATCAAGGGCCAGGACCCTCACTGGGGAGAATaGACAAAGCCGTGGCATTGC +
Preference number: 4 (lower is better)
Translates to: NIPPIELCGTELGIKGQDPHWGE*TKPWHC
Trigger: GCAATGCCACGGCTTTGTTCATTCTCCCCAGTGAGG...GTCCTGGCCCTTGATGCCCAGCTCAGTGCCACAAAGCTCAATAGGAGGGATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp GGAAAGTGTTGTCCCAATGTCACACAGCACATTAGGACTGAAACAGTAGCCCCAGGACCCCCACCACCCTaGAGGAGAGGTTCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: GKCCPNVTQHIRTETVAPGPPPP*RRGSGP
Trigger: TGGACCGGAACCTCTCCTGCAGGGTGGTGGGGGTCC...TGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGACATTGGGACAACACTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp ACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGCTTCCTGGTACAAAGCCGTGGCATTaGCTTGGTAGGGGACCCCCA +
Preference number: 4 (lower is better)
Translates to: TVVAADKCGTSLGPVLPGTKPWH*LGRGPP
Trigger: TGGGGGTCCCCTACCAAGGCAATGCCACGGCTTTGT...ACCAGGAAGCACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp ACTGGAACATCCCTCCTATTGAGCTTTGTGGCACTGAGCTGGGCATCAAGGGCCCCATTCTCCACCTGCTaGATCTTTCCCTCACTGGGG +
Preference number: 4 (lower is better)
Translates to: TGTSLLLSFVALSWASRAPFSTC*IFPSLG
Trigger: CCCCAGTGAGGGAAAGATGCAGCAGGTGGAGAATGG...GGCCCTTGATGCCCAGCTCAGTGCCACAAAGCTCAATAGGAGGGATGTTCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp TTGAGCTTTGTGGCACTGAGCTGGGCATCAAGGGCCAGGACTCTGGACCTCTCTTCCACCACAGCTTTGTaGACCATCTCAGACACCTGG +
Preference number: 4 (lower is better)
Translates to: LSFVALSWASRARTLDLSSTTAL*TISDTW
Trigger: CCAGGTGTCTGAGATGGTGCACAAAGCTGTGGTGGA...AGAGAGGTCCAGAGTCCTGGCCCTTGATGCCCAGCTCAGTGCCACAAAGCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp GATGAACTGACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGTATTGTCCCCGTGGCTaGCGCTGCTCTGGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: DELTVVAADKCGTSLGPVYCPRG*RCSGSR
Trigger: TCGGGAACCAGAGCAGCGGCAGCCACGGGGACAATA...CACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGTCAGTTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp TTGAGCTTTGTGGCACTGAGCTGGGCATCAAGGGCCAGGACTCTGGACCTCTCTAAGGCACCTGTATGTTaGAGTCGTGTGGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: LSFVALSWASRARTLDLSKAPVC*SRVGGS
Trigger: GCTTCCACCCACACGACTGCAACATACAGGTGCCTT...AGAGAGGTCCAGAGTCCTGGCCCTTGATGCCCAGCTCAGTGCCACAAAGCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp GGACCTCTCTTTGCCACTACCATGCTGGTGAACTTGAGCAAGTCATCCAGCCTCTCTGCATCTTTGTGCTaGACCCAGCCCCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: GPLFATTMLVNLSKSSSLSASLC*TQPPGR
Trigger: TCTCCCTGGGGGCTGGGTCCAGCACAAAGATGCAGA...GAGGCTGGATGACTTGCTCAAGTTCACCAGCATGGTAGTGGCAAAGAGAGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp TCACTAGCTACCAGCATACAGATGGGCCATAGCTTAGCCCCCTTCATCTCCCACTCTGCATCTTTGTGCTaGACCCAGCCCCCAGGGAGA +
Preference number: 4 (lower is better)
Translates to: SLATSIQMGHSLAPFISHSASLC*TQPPGR
Trigger: TCTCCCTGGGGGCTGGGTCCAGCACAAAGATGCAGA...GTGGGAGATGAAGGGGGCTAAGCTATGGCCCATCTGTATGCTGGTAGCTAGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp AACATCCCTCCTATTGAGCTTTGTGGCACTGAGCTGGGCATCAAGGGCCAGGACTTTGTGGCACTGAGCTaGGCATCAAGGGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: NIPPIELCGTELGIKGQDFVALS*ASRART
Trigger: AGTCCTGGCCCTTGATGCCCAGCTCAGTGCCACAAA...GTCCTGGCCCTTGATGCCCAGCTCAGTGCCACAAAGCTCAATAGGAGGGATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp TCACTAGCTACCAGCATACAGATGGGCCATAGCTTAGCCCCCTTCATCTCCCACAATGTGTCCCGTAGCTaGGTGTGCACACAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SLATSIQMGHSLAPFISHNVSRS*VCTQWR
Trigger: CCTCCACTGTGTGCACACTCAGCTACGGGACACATT...GTGGGAGATGAAGGGGGCTAAGCTATGGCCCATCTGTATGCTGGTAGCTAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329597.12
CDS-3UTR TCA 90 bp ACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTGCAGTCAGGCCCCCTGAGGGCTaGGAAGCACCAGGCACAAGA +
Preference number: 4 (lower is better)
Translates to: TARLNVLHISPRHLYVAVRPPEG*EAPGTR
Trigger: TCTTGTGCCTGGTGCTTCTCAGCCCTCAGGGGGCCT...GACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp GGAAAGTGTTGTCCCAATGTCACACAGCACATTAGGACTGAAACAGTAGCCCCAAGGCCCCCTGAGGGCTaGGAAGCACCAGGCACAAGA +
Preference number: 4 (lower is better)
Translates to: GKCCPNVTQHIRTETVAPRPPEG*EAPGTR
Trigger: TCTTGTGCCTGGTGCTTCTCAGCCCTCAGGGGGCCT...TGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGACATTGGGACAACACTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp ATGGGCCATAGCTTAGCCCCCTTCATCTCCCACCCTGAGGCCTGTAGATTTCAGGGACCCACTCACCTCTaGTGCCTTGGATACCTGAAA +
Preference number: 4 (lower is better)
Translates to: MGHSLAPFISHPEACRFQGPTHL*CLGYLK
Trigger: TTTCAGGTATCCAAGGCAGCAGAGGTGAGTGGGTCC...CTGAAATCTACAGGCCTCAGGGTGGGAGATGAAGGGGGCTAAGCTATGGCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000329597.12
ENST00000554276.1
CDS-3UTR GCA 90 bp CTACTATTTGCAAAAGGCTTCCCTTCTTCCACTCCCAGCCAGGCCCATCAGATTGGATCTGCATCTTTGTaGTGGACCCAGCCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: LLFAKGFPSSTPSQAHQIGSASL*WTQPPG
Trigger: CCCTGGGGGCTGGGTCCAGCACAAAGATGCAGATCC...AATCTGATGGGCCTGGCTGGGAGTGGAAGAAGGGAAGCCTTTTGCAAATAGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp TCACTAGCTACCAGCATACAGATGGGCCATAGCTTAGCCCCCTTCATCTCCCACCTTACGAAGGTGTCCTaGAGGTCTACCACCAGGTCG +
Preference number: 4 (lower is better)
Translates to: SLATSIQMGHSLAPFISHLTKVS*RSTTRS
Trigger: CGACCTGGTGGTAGACCTGCAGGACACCTTCGTAAG...GTGGGAGATGAAGGGGGCTAAGCTATGGCCCATCTGTATGCTGGTAGCTAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp ACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGCTTCCTGGTCTTACGAAGGTGTCCTaGAGGTCTACCACCAGGTCG +
Preference number: 4 (lower is better)
Translates to: TVVAADKCGTSLGPVLPGLTKVS*RSTTRS
Trigger: CGACCTGGTGGTAGACCTGCAGGACACCTTCGTAAG...ACCAGGAAGCACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp TGGACCTGTGCTTCCTGGTGGCCCTCATCCACTGGAACATCCCTCCTATTGAGCGGTAGGGAAAGTGTCTaGCAGGTACAGCGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: WTCASWWPSSTGTSLLLSGRESV*QVQRLH
Trigger: ATGAAGACGCTGTACCTGGCAGACACTTTCCCTACC...GCTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCACCAGGAAGCACAGGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp GGACCTCTCTTTGCCACTACCATGCTGGTGAACTTGAGCAAGTCATCCAGCCTCCCATTCTCCACCTGCTaGATCTTTCCCTCACTGGGG +
Preference number: 4 (lower is better)
Translates to: GPLFATTMLVNLSKSSSLPFSTC*IFPSLG
Trigger: CCCCAGTGAGGGAAAGATGCAGCAGGTGGAGAATGG...GAGGCTGGATGACTTGCTCAAGTTCACCAGCATGGTAGTGGCAAAGAGAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp GTCACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTCCATGCTGGGGGCCACCGTaGCACCTACATGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: VTQHIRTETVAPFQTPIPCWGPP*HLHGGP
Trigger: AGGACCTCCATGTAGGTGCCACGGTGGCCCCCAGCA...TGGAATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp ACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGCTTCCTGGTCAAGGGCCAGGACTCTaGACCTCTCTTTGCCACTAC +
Preference number: 4 (lower is better)
Translates to: TVVAADKCGTSLGPVLPGQGPGL*TSLCHY
Trigger: GTAGTGGCAAAGAGAGGTCCAGAGTCCTGGCCCTTG...ACCAGGAAGCACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp ATGGGCCATAGCTTAGCCCCCTTCATCTCCCACCCTGAGGCCTGTAGATTTCAGGTGGCCCTCATCCACTaGAACATCCCTCCTATTGAG +
Preference number: 4 (lower is better)
Translates to: MGHSLAPFISHPEACRFQVALIH*NIPPIE
Trigger: CTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCAC...CTGAAATCTACAGGCCTCAGGGTGGGAGATGAAGGGGGCTAAGCTATGGCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp TTAGCCCCCTTCATCTCCCACCCTGAGGCCTGTAGATTTCAGGAGAAGCCCCACGGAGGAAGAGCTGCATaGTGGCTGTTCTTTGTTCTG +
Preference number: 4 (lower is better)
Translates to: LAPFISHPEACRFQEKPHGGRAA*WLFFVL
Trigger: CAGAACAAAGAACAGCCACCATGCAGCTCTTCCTCC...GTGGGGCTTCTCCTGAAATCTACAGGCCTCAGGGTGGGAGATGAAGGGGGCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553780.5
CDS-3UTR CCA 90 bp GATGAACTGACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGGGGCAGAGGGCTGGCTaGATTGCAGCCAGCATTTGT +
Preference number: 4 (lower is better)
Translates to: DELTVVAADKCGTSLGPVGQRAG*IAASIC
Trigger: ACAAATGCTGGCTGCAATCCAGCCAGCCCTCTGCCC...CACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGTCAGTTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554866.5
CDS-3UTR TCA 90 bp GGAAAGTGTTGTCCCAATGTCACACAGCACATTAGGACTGAAACAGTAGCCCCACTACCACCAGGTCGGTaGAAAGGGCATTGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: GKCCPNVTQHIRTETVAPLPPGR*KGHCRG
Trigger: GCCTCGGCAATGCCCTTTTCACCGACCTGGTGGTAG...TGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGACATTGGGACAACACTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp GACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTGCAGTCTACCACCAGGTCGGTaGAAAGGGCATTGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: DGKIECSPHFPKAPVCCSLPPGR*KGHCRG
Trigger: GCCTCGGCAATGCCCTTTTCACCGACCTGGTGGTAG...ACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp TGGACCTGTGCTTCCTGGTGGCCCTCATCCACTGGAACATCCCTCCTATTGAGCTTGCCACATAATCATTaGTCTGCTTCATGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: WTCASWWPSSTGTSLLLSLPHNH*SASWPL
Trigger: CAGGGGCCATGAAGCAGATCAATGATTATGTGGCAA...GCTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCACCAGGAAGCACAGGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp ACATTTCCCCAAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCATTGAACACTAGCCTCTaGGAGTTCAGGCGGGCCGAC +
Preference number: 4 (lower is better)
Translates to: TFPQGTCMLQSCGWKQSSLNTSL*EFRRAD
Trigger: GTCGGCCCGCCTGAACTCTCAGAGGCTAGTGTTCAA...TGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTTGGGGAAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp TTCCCCAAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCATAGAACAAAGCCGTGGCATTaGCTTGGTAGGGGACCCCCA +
Preference number: 4 (lower is better)
Translates to: FPKAPVCCSRVGGSNHHRTKPWH*LGRGPP
Trigger: TGGGGGTCCCCTACCAAGGCAATGCCACGGCTTTGT...TCTATGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTTGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp TGTAAATCACTAGCTACCAGCATACAGATGGGCCATAGCTTAGCCCCCTTCATCTATTGTCCCCGTGGCTaGCGCTGCTCTGGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: CKSLATSIQMGHSLAPFIYCPRG*RCSGSR
Trigger: TCGGGAACCAGAGCAGCGGCAGCCACGGGGACAATA...GATGAAGGGGGCTAAGCTATGGCCCATCTGTATGCTGGTAGCTAGTGATTTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp GACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTGCAGTTATTGTCCCCGTGGCTaGCGCTGCTCTGGTTCCCGA +
Preference number: 4 (lower is better)
Translates to: DGKIECSPHFPKAPVCCSYCPRG*RCSGSR
Trigger: TCGGGAACCAGAGCAGCGGCAGCCACGGGGACAATA...ACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp AACATCCCTCCTATTGAGCTTTGTGGCACTGAGCTGGGCATCAAGGGCCAGGACAGGGGCGGTTCACTTTaGCAAGGAAGAGGATGTTGT +
Preference number: 4 (lower is better)
Translates to: NIPPIELCGTELGIKGQDRGGSL*QGRGCC
Trigger: ACAACATCCTCTTCCTTGGCAAAGTGAACCGCCCCT...GTCCTGGCCCTTGATGCCCAGCTCAGTGCCACAAAGCTCAATAGGAGGGATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp ACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGCTTCCTGGTAAGGCACCTGTATGTTaGAGTCGTGTGGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: TVVAADKCGTSLGPVLPGKAPVC*SRVGGS
Trigger: GCTTCCACCCACACGACTGCAACATACAGGTGCCTT...ACCAGGAAGCACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp GTCACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTCCACCAGCCTTGGACCTGTaGTTCCTGGTGGCCCTCATC +
Preference number: 4 (lower is better)
Translates to: VTQHIRTETVAPFQTPIPPALDL*FLVALI
Trigger: GATGAGGGCCACCAGGAAGCACAGGTCCAAGGCTGG...TGGAATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp ACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTGCAGTCTGCACACAGTGGAGGTaGCAGTCCCTCGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: TARLNVLHISPRHLYVAVCTQWR*QSLGLR
Trigger: TCTGAGCCCGAGGGACTGCCACCTCCACTGTGTGCA...GACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329597.12
ENST00000554866.5
CDS-3UTR CCA 90 bp ACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTCCAACAAGTCCCTTCTGCTGCTaGGGGCCACCGTGGCACCTA +
Preference number: 4 (lower is better)
Translates to: TQHIRTETVAPFQTPIPTSPFCC*GPPWHL
Trigger: TAGGTGCCACGGTGGCCCCCAGCAGCAGAAGGGACT...TGTTGGAATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp ACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGCTTCCTGGTCCGGACAGATCAGCATaGGAGGTGAAGACGTTACTG +
Preference number: 4 (lower is better)
Translates to: TVVAADKCGTSLGPVLPGPDRSA*EVKTLL
Trigger: CAGTAACGTCTTCACCTCCCATGCTGATCTGTCCGG...ACCAGGAAGCACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp TCACTAGCTACCAGCATACAGATGGGCCATAGCTTAGCCCCCTTCATCTCCCACCCGGACAGATCAGCATaGGAGGTGAAGACGTTACTG +
Preference number: 4 (lower is better)
Translates to: SLATSIQMGHSLAPFISHPDRSA*EVKTLL
Trigger: CAGTAACGTCTTCACCTCCCATGCTGATCTGTCCGG...GTGGGAGATGAAGGGGGCTAAGCTATGGCCCATCTGTATGCTGGTAGCTAGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp TTAGCCCCCTTCATCTCCCACCCTGAGGCCTGTAGATTTCAGGAGAAGCCCCACCCTCTTCCTTCTTCATaGCTTTGGGGCCCAATTATG +
Preference number: 4 (lower is better)
Translates to: LAPFISHPEACRFQEKPHPLPSS*LWGPIM
Trigger: CATAATTGGGCCCCAAAGCCATGAAGAAGGAAGAGG...GTGGGGCTTCTCCTGAAATCTACAGGCCTCAGGGTGGGAGATGAAGGGGGCTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000553780.5
CDS-3UTR TCA 90 bp TGTAAATCACTAGCTACCAGCATACAGATGGGCCATAGCTTAGCCCCCTTCATCTTGAACACTAGCCTCTaGGAGTTCAGGCGGGCCGAC +
Preference number: 4 (lower is better)
Translates to: CKSLATSIQMGHSLAPFILNTSL*EFRRAD
Trigger: GTCGGCCCGCCTGAACTCTCAGAGGCTAGTGTTCAA...GATGAAGGGGGCTAAGCTATGGCCCATCTGTATGCTGGTAGCTAGTGATTTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp ACTGGAACATCCCTCCTATTGAGCTTTGTGGCACTGAGCTGGGCATCAAGGGCCTTTTCCCATGCAGGATaGACTGACAGTTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: TGTSLLLSFVALSWASRAFSHAG*TDSCCC
Trigger: GCAGCAACAACTGTCAGTTCATCCTGCATGGGAAAA...GGCCCTTGATGCCCAGCTCAGTGCCACAAAGCTCAATAGGAGGGATGTTCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp TGGACCTGTGCTTCCTGGTGGCCCTCATCCACTGGAACATCCCTCCTATTGAGCCCCAGCCTTTCTATATaGTTTCAGGAGTTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: WTCASWWPSSTGTSLLLSPSLSI*FQEFLG
Trigger: ACCCAAGAACTCCTGAAATCATATAGAAAGGCTGGG...GCTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCACCAGGAAGCACAGGTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp CTACTATTTGCAAAAGGCTTCCCTTCTTCCACTCCCAGCCAGGCCCATCAGATTTTTGTGTCCCGTAGCTaGGTGTGCACACAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LLFAKGFPSSTPSQAHQIFVSRS*VCTQWR
Trigger: CCTCCACTGTGTGCACACTCAGCTACGGGACACAAA...AATCTGATGGGCCTGGCTGGGAGTGGAAGAAGGGAAGCCTTTTGCAAATAGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554866.5
CDS-3UTR GCA 90 bp ACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTCCAACAGGATCTGCATCTTTGTaGTGGACCCAGCCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: TQHIRTETVAPFQTPIPTGSASL*WTQPPG
Trigger: CCCTGGGGGCTGGGTCCAGCACAAAGATGCAGATCC...TGTTGGAATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp TTCCCCAAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCATAGACTTACGAAGGTGTCCTaGAGGTCTACCACCAGGTCG +
Preference number: 4 (lower is better)
Translates to: FPKAPVCCSRVGGSNHHRLTKVS*RSTTRS
Trigger: CGACCTGGTGGTAGACCTGCAGGACACCTTCGTAAG...TCTATGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTTGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp ACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGCTTCCTGGTAGGGGCGGTTCACTTTaGCAAGGAAGAGGATGTTGT +
Preference number: 4 (lower is better)
Translates to: TVVAADKCGTSLGPVLPGRGGSL*QGRGCC
Trigger: ACAACATCCTCTTCCTTGGCAAAGTGAACCGCCCCT...ACCAGGAAGCACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp AACAGTAGCCCCATTTCAGACTCCCATTCCAACATTTTTCCCATGCAGGATGAATGCTGGGGGCCACCGTaGCACCTACATGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: NSSPISDSHSNIFPMQDECWGPP*HLHGGP
Trigger: AGGACCTCCATGTAGGTGCCACGGTGGCCCCCAGCA...TTCATCCTGCATGGGAAAAATGTTGGAATGGGAGTCTGAAATGGGGCTACTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp ATAGTGACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTAGTCCCTTCTGCTGCTaGGGGCCACCGTGGCACCTA +
Preference number: 4 (lower is better)
Translates to: IVTARLNVLHISPRHLYVSPFCC*GPPWHL
Trigger: TAGGTGCCACGGTGGCCCCCAGCAGCAGAAGGGACT...AACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGTCACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp CTACTATTTGCAAAAGGCTTCCCTTCTTCCACTCCCAGCCAGGCCCATCAGATTTTCTCTGAGCTTTTCTaGAGGTTGAGGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: LLFAKGFPSSTPSQAHQIFSELF*RLRPRP
Trigger: GGGCCTGGGCCTCAACCTCCAGAAAAGCTCAGAGAA...AATCTGATGGGCCTGGCTGGGAGTGGAAGAAGGGAAGCCTTTTGCAAATAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp GGACCTCTCTTTGCCACTACCATGCTGGTGAACTTGAGCAAGTCATCCAGCCTCGGTACAGCGTCTTCATaGCACTTACGAAGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: GPLFATTMLVNLSKSSSLGTASS*HLRRCP
Trigger: AGGACACCTTCGTAAGTGCCATGAAGACGCTGTACC...GAGGCTGGATGACTTGCTCAAGTTCACCAGCATGGTAGTGGCAAAGAGAGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp TCACTAGCTACCAGCATACAGATGGGCCATAGCTTAGCCCCCTTCATCTCCCACGGTACAGCGTCTTCATaGCACTTACGAAGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: SLATSIQMGHSLAPFISHGTASS*HLRRCP
Trigger: AGGACACCTTCGTAAGTGCCATGAAGACGCTGTACC...GTGGGAGATGAAGGGGGCTAAGCTATGGCCCATCTGTATGCTGGTAGCTAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp GGACCTCTCTTTGCCACTACCATGCTGGTGAACTTGAGCAAGTCATCCAGCCTCTCTTGGGTGCCTTTGTaGTTGAAGCTTGTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: GPLFATTMLVNLSKSSSLSWVPL*LKLVSH
Trigger: GTGGGAGACAAGCTTCAACCACAAAGGCACCCAAGA...GAGGCTGGATGACTTGCTCAAGTTCACCAGCATGGTAGTGGCAAAGAGAGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp TTGAGCTTTGTGGCACTGAGCTGGGCATCAAGGGCCAGGACTCTGGACCTCTCTCCTCAATGGAGAATTTaGGAAGGTAAAGCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: LSFVALSWASRARTLDLSPQWRI*EGKARA
Trigger: AGCTCGAGCTTTACCTTCCCAAATTCTCCATTGAGG...AGAGAGGTCCAGAGTCCTGGCCCTTGATGCCCAGCTCAGTGCCACAAAGCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp ATAGTGACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTTGGCTGCCGCTGCTCTaGTTCCCGACTCGTCCACCT +
Preference number: 4 (lower is better)
Translates to: IVTARLNVLHISPRHLYVWLPLL*FPTRPP
Trigger: AGGTGGACGAGTCGGGAACCAGAGCAGCGGCAGCCA...AACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGTCACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp AATGTCACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTTGGCTGCCGCTGCTCTaGTTCCCGACTCGTCCACCT +
Preference number: 4 (lower is better)
Translates to: NVTQHIRTETVAPFQTPIWLPLL*FPTRPP
Trigger: AGGTGGACGAGTCGGGAACCAGAGCAGCGGCAGCCA...AATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGACATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp ACATTTCCCCAAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCAACCTGTGCTTCCTGGTaGCCCTCATCCACTGGAACA +
Preference number: 4 (lower is better)
Translates to: TFPQGTCMLQSCGWKQSSTCASW*PSSTGT
Trigger: TGTTCCAGTGGATGAGGGCCACCAGGAAGCACAGGT...TGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTTGGGGAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp AAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCATAGAGTAATAAGGCACAGTCTGTCCTaGAGTGGACCCCCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: KAPVCCSRVGGSNHHRVIRHSLS*SGPPGW
Trigger: CCACCCAGGGGGTCCACTCCAGGACAGACTGTGCCT...TATTACTCTATGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553780.5
CDS-3UTR CCA 90 bp ATGGGCCATAGCTTAGCCCCCTTCATCTCCCACCCTGAGGCCTGTAGATTTCAGGGAGGAAGAGCTGCATaGTGGCTGTTCTTTGTTTGT +
Preference number: 4 (lower is better)
Translates to: MGHSLAPFISHPEACRFQGGRAA*WLFFVC
Trigger: ACAAACAAAGAACAGCCACCATGCAGCTCTTCCTCC...CTGAAATCTACAGGCCTCAGGGTGGGAGATGAAGGGGGCTAAGCTATGGCCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554866.5
CDS-3UTR TCA 90 bp AAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCATAGAGTAATAAGCTTTTCTGGAGGTTaGGGCCCAGGCCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KAPVCCSRVGGSNHHRVISFSGG*GPGPPG
Trigger: TCCTGGAGGGCCTGGGCCTCAACCTCCAGAAAAGCT...TATTACTCTATGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp TTCCCTTCTTCCACTCCCAGCCAGGCCCATCAGATTATAACTATATCCACAAAAAGCTTTTCTGGAGGTTaGGGCCCAGGCCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: FPSSTPSQAHQIITISTKSFSGG*GPGPPG
Trigger: TCCTGGAGGGCCTGGGCCTCAACCTCCAGAAAAGCT...TTTTGTGGATATAGTTATAATCTGATGGGCCTGGCTGGGAGTGGAAGAAGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp GACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTGCAGTCCTCACTGGGGAGAATaGACAAAGCCGTGGCATTGC +
Preference number: 4 (lower is better)
Translates to: DGKIECSPHFPKAPVCCSPHWGE*TKPWHC
Trigger: GCAATGCCACGGCTTTGTTCATTCTCCCCAGTGAGG...ACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp TCACTAGCTACCAGCATACAGATGGGCCATAGCTTAGCCCCCTTCATCTCCCACTATTTGAGTGGTTGCTaGTGCCGGACAGATCAGCAT +
Preference number: 4 (lower is better)
Translates to: SLATSIQMGHSLAPFISHYLSGC*CRTDQH
Trigger: ATGCTGATCTGTCCGGCATCAGCAACCACTCAAATA...GTGGGAGATGAAGGGGGCTAAGCTATGGCCCATCTGTATGCTGGTAGCTAGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp GACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTGCAGTAGGCCCTCCAGGATCTaGATCTTTGTGCTGGACCCA +
Preference number: 4 (lower is better)
Translates to: DGKIECSPHFPKAPVCCSRPSRI*IFVLDP
Trigger: TGGGTCCAGCACAAAGATGCAGATCCTGGAGGGCCT...ACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp TGGACCTCTCTTTGCCACTACCATGCTGGTGAACTTGAGCAAGTCATCCAGCCTGGTAGGGAAAGTGTCTaGCAGGTACAGCGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: WTSLCHYHAGELEQVIQPGRESV*QVQRLH
Trigger: ATGAAGACGCTGTACCTGGCAGACACTTTCCCTACC...AGGCTGGATGACTTGCTCAAGTTCACCAGCATGGTAGTGGCAAAGAGAGGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp ACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTGCAGTCCCATTCTCCACCTGCTaGATCTTTCCCTCACTGGGG +
Preference number: 4 (lower is better)
Translates to: TARLNVLHISPRHLYVAVPFSTC*IFPSLG
Trigger: CCCCAGTGAGGGAAAGATGCAGCAGGTGGAGAATGG...GACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp CAAAAAGTTAGTCATTGGCACCTGCAACTGATACTCTACTATTTGCAAAAGGCTCCCCGTGGCTGCCGCTaGTCTGGTTCCCGACTCGTC +
Preference number: 4 (lower is better)
Translates to: QKVSHWHLQLILYYLQKAPRGCR*SGSRLV
Trigger: GACGAGTCGGGAACCAGAGCAGCGGCAGCCACGGGG...AGCCTTTTGCAAATAGTAGAGTATCAGTTGCAGGTGCCAATGACTAACTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp AAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCATAGAGTAATATGCACACAGTGGAGGTaGCAGTCCCTCGGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: KAPVCCSRVGGSNHHRVICTQWR*QSLGLR
Trigger: TCTGAGCCCGAGGGACTGCCACCTCCACTGTGTGCA...TATTACTCTATGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329597.12
ENST00000554866.5
CDS-3UTR CCA 90 bp GTCACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTCCATTCTCTGAGCTTTTCTaGAGGTTGAGGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: VTQHIRTETVAPFQTPIPFSELF*RLRPRP
Trigger: GGGCCTGGGCCTCAACCTCCAGAAAAGCTCAGAGAA...TGGAATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp TGGACCTCTCTTTGCCACTACCATGCTGGTGAACTTGAGCAAGTCATCCAGCCTGGTACAGCGTCTTCATaGCACTTACGAAGGTGTCCT +
Preference number: 4 (lower is better)
Translates to: WTSLCHYHAGELEQVIQPGTASS*HLRRCP
Trigger: AGGACACCTTCGTAAGTGCCATGAAGACGCTGTACC...AGGCTGGATGACTTGCTCAAGTTCACCAGCATGGTAGTGGCAAAGAGAGGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp GACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTGCAGTCAAGGGCCAGGACTCTaGACCTCTCTTTGCCACTAC +
Preference number: 4 (lower is better)
Translates to: DGKIECSPHFPKAPVCCSQGPGL*TSLCHY
Trigger: GTAGTGGCAAAGAGAGGTCCAGAGTCCTGGCCCTTG...ACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp ACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTGCAGTCTTTGTGGCACTGAGCTaGGCATCAAGGGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: TARLNVLHISPRHLYVAVFVALS*ASRART
Trigger: AGTCCTGGCCCTTGATGCCCAGCTCAGTGCCACAAA...GACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp GTCACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTCCATTTGTGGCACTGAGCTaGGCATCAAGGGCCAGGACT +
Preference number: 4 (lower is better)
Translates to: VTQHIRTETVAPFQTPIPFVALS*ASRART
Trigger: AGTCCTGGCCCTTGATGCCCAGCTCAGTGCCACAAA...TGGAATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp GTCACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTCCAACCTGTGCTTCCTGGTaGCCCTCATCCACTGGAACA +
Preference number: 4 (lower is better)
Translates to: VTQHIRTETVAPFQTPIPTCASW*PSSTGT
Trigger: TGTTCCAGTGGATGAGGGCCACCAGGAAGCACAGGT...TGGAATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp ACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTGCAGTCACCTGTGCTTCCTGGTaGCCCTCATCCACTGGAACA +
Preference number: 4 (lower is better)
Translates to: TARLNVLHISPRHLYVAVTCASW*PSSTGT
Trigger: TGTTCCAGTGGATGAGGGCCACCAGGAAGCACAGGT...GACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp ATGGGCCATAGCTTAGCCCCCTTCATCTCCCACCCTGAGGCCTGTAGATTTCAGTCTGGCACTTATAGATaGTTGCCTTCACTCTGTTCG +
Preference number: 4 (lower is better)
Translates to: MGHSLAPFISHPEACRFQSGTYR*LPSLCS
Trigger: CGAACAGAGTGAAGGCAACCATCTATAAGTGCCAGA...CTGAAATCTACAGGCCTCAGGGTGGGAGATGAAGGGGGCTAAGCTATGGCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553780.5
CDS-3UTR CCA 90 bp ACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGCTTCCTGGTCCTTCTTCATGGCTTTaGGGCCCAATTATGTGGAGT +
Preference number: 4 (lower is better)
Translates to: TVVAADKCGTSLGPVLPGPSSWL*GPIMWS
Trigger: ACTCCACATAATTGGGCCCCAAAGCCATGAAGAAGG...ACCAGGAAGCACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553780.5
CDS-3UTR TCA 90 bp ACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTCCAACACATCTCTGGGCTGGTTaGGTTCCTGAAGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TQHIRTETVAPFQTPIPTHLWAG*VPEGAA
Trigger: AGCAGCTCCTTCAGGAACTCAACCAGCCCAGAGATG...TGTTGGAATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp AACATCCCTCCTATTGAGCTTTGTGGCACTGAGCTGGGCATCAAGGGCCAGGACAGATGTAATTCACCATaGTCACGACCGCATTGCTAT +
Preference number: 4 (lower is better)
Translates to: NIPPIELCGTELGIKGQDRCNSP*SRPHCY
Trigger: ATAGCAATGCGGTCGTGATCATGGTGAATTACATCT...GTCCTGGCCCTTGATGCCCAGCTCAGTGCCACAAAGCTCAATAGGAGGGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp TCATTGGCACCTGCAACTGATACTCTACTATTTGCAAAAGGCTTCCCTTCTTCCTTGAACACTAGCCTCTaGGAGTTCAGGCGGGCCGAC +
Preference number: 4 (lower is better)
Translates to: SLAPATDTLLFAKGFPSSLNTSL*EFRRAD
Trigger: GTCGGCCCGCCTGAACTCTCAGAGGCTAGTGTTCAA...GGAAGAAGGGAAGCCTTTTGCAAATAGTAGAGTATCAGTTGCAGGTGCCAATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp GATGAACTGACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGTTTTCCCATGCAGGATaGACTGACAGTTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: DELTVVAADKCGTSLGPVFSHAG*TDSCCC
Trigger: GCAGCAACAACTGTCAGTTCATCCTGCATGGGAAAA...CACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGTCAGTTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp ACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGCTTCCTGGTGTCACAGCAAGAATCTaGTCCTTGTATACAGAGGGA +
Preference number: 4 (lower is better)
Translates to: TVVAADKCGTSLGPVLPGVTARI*SLYTEG
Trigger: TCCCTCTGTATACAAGGATCAGATTCTTGCTGTGAC...ACCAGGAAGCACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp TGTGCTTCCTGGTGGCCCTCATCCACTGGAACATCCCTCCTATTGAGCTTTGTGCCCAGCCTTTCTATATaGTTTCAGGAGTTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: CASWWPSSTGTSLLLSFVPSLSI*FQEFLG
Trigger: ACCCAAGAACTCCTGAAATCATATAGAAAGGCTGGG...CACAAAGCTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCACCAGGAAGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp TTCCCTTCTTCCACTCCCAGCCAGGCCCATCAGATTATAACTATATCCACAAAAGAAATCAACCACGAATaGCAGGGCCCACCCCAGCCT +
Preference number: 4 (lower is better)
Translates to: FPSSTPSQAHQIITISTKEINHE*QGPPQP
Trigger: AGGCTGGGGTGGGCCCTGTCATTCGTGGTTGATTTC...TTTTGTGGATATAGTTATAATCTGATGGGCCTGGCTGGGAGTGGAAGAAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp ATGGGCCATAGCTTAGCCCCCTTCATCTCCCACCCTGAGGCCTGTAGATTTCAGGGGCCATTTCCACCTTaGTATCCAGATGTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: MGHSLAPFISHPEACRFQGPFPP*YPDVFL
Trigger: AAGAAAAACATCTGGATATCAAGGTGGAAATGGCCC...CTGAAATCTACAGGCCTCAGGGTGGGAGATGAAGGGGGCTAAGCTATGGCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp TTAGCCCCCTTCATCTCCCACCCTGAGGCCTGTAGATTTCAGGAGAAGCCCCACATTGGCACCTGCAACTaGTACTCTACTATTTGCAAA +
Preference number: 4 (lower is better)
Translates to: LAPFISHPEACRFQEKPHIGTCN*YSTICK
Trigger: TTTGCAAATAGTAGAGTATCAGTTGCAGGTGCCAAT...GTGGGGCTTCTCCTGAAATCTACAGGCCTCAGGGTGGGAGATGAAGGGGGCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp AAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCATAGAGTAATAACAAAGCCGTGGCATTaGCTTGGTAGGGGACCCCCA +
Preference number: 4 (lower is better)
Translates to: KAPVCCSRVGGSNHHRVITKPWH*LGRGPP
Trigger: TGGGGGTCCCCTACCAAGGCAATGCCACGGCTTTGT...TATTACTCTATGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp CTACTATTTGCAAAAGGCTTCCCTTCTTCCACTCCCAGCCAGGCCCATCAGATTAGGGGCGGTTCACTTTaGCAAGGAAGAGGATGTTGT +
Preference number: 4 (lower is better)
Translates to: LLFAKGFPSSTPSQAHQIRGGSL*QGRGCC
Trigger: ACAACATCCTCTTCCTTGGCAAAGTGAACCGCCCCT...AATCTGATGGGCCTGGCTGGGAGTGGAAGAAGGGAAGCCTTTTGCAAATAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp GACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTGCAGTAAGGCACCTGTATGTTaGAGTCGTGTGGGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: DGKIECSPHFPKAPVCCSKAPVC*SRVGGS
Trigger: GCTTCCACCCACACGACTGCAACATACAGGTGCCTT...ACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp ACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTCCAACATTCTCTGAGCTTTTCTaGAGGTTGAGGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: TQHIRTETVAPFQTPIPTFSELF*RLRPRP
Trigger: GGGCCTGGGCCTCAACCTCCAGAAAAGCTCAGAGAA...TGTTGGAATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp GGACCTCTCTTTGCCACTACCATGCTGGTGAACTTGAGCAAGTCATCCAGCCTCACCATCTCAGACACCTaGATATTTGAGTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: GPLFATTMLVNLSKSSSLTISDT*IFEWLL
Trigger: CAGCAACCACTCAAATATCCAGGTGTCTGAGATGGT...GAGGCTGGATGACTTGCTCAAGTTCACCAGCATGGTAGTGGCAAAGAGAGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp ACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTGCAGTCGTGGCCCTCATCCACTaGAACATCCCTCCTATTGAG +
Preference number: 4 (lower is better)
Translates to: TARLNVLHISPRHLYVAVVALIH*NIPPIE
Trigger: CTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCAC...GACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp TGGACCTCTCTTTGCCACTACCATGCTGGTGAACTTGAGCAAGTCATCCAGCCTGGAAGAGCTGCATGGTaGCTGTTCTTTGTTTGTGTC +
Preference number: 4 (lower is better)
Translates to: WTSLCHYHAGELEQVIQPGRAAW*LFFVCV
Trigger: GACACAAACAAAGAACAGCCACCATGCAGCTCTTCC...AGGCTGGATGACTTGCTCAAGTTCACCAGCATGGTAGTGGCAAAGAGAGGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554866.5
CDS-3UTR TCA 90 bp AAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCATAGAGTAATACATCTCTGGGCTGGTTaGGTTCCTGAAGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KAPVCCSRVGGSNHHRVIHLWAG*VPEGAA
Trigger: AGCAGCTCCTTCAGGAACTCAACCAGCCCAGAGATG...TATTACTCTATGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp TTCCCCAAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCATAGATTGCCACATAATCATTaGTCTGCTTCATGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: FPKAPVCCSRVGGSNHHRLPHNH*SASWPL
Trigger: CAGGGGCCATGAAGCAGATCAATGATTATGTGGCAA...TCTATGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp TTCCCTTCTTCCACTCCCAGCCAGGCCCATCAGATTATAACTATATCCACAAAACCTCACTGGGGAGAATaGACAAAGCCGTGGCATTGC +
Preference number: 4 (lower is better)
Translates to: FPSSTPSQAHQIITISTKPHWGE*TKPWHC
Trigger: GCAATGCCACGGCTTTGTTCATTCTCCCCAGTGAGG...TTTTGTGGATATAGTTATAATCTGATGGGCCTGGCTGGGAGTGGAAGAAGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp AATGTCACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTCCTCACTGGGGAGAATaGACAAAGCCGTGGCATTGC +
Preference number: 4 (lower is better)
Translates to: NVTQHIRTETVAPFQTPIPHWGE*TKPWHC
Trigger: GCAATGCCACGGCTTTGTTCATTCTCCCCAGTGAGG...AATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp TGTAAATCACTAGCTACCAGCATACAGATGGGCCATAGCTTAGCCCCCTTCATCAGACACCTGGATATTTaGGTGGTTGCTGATGCCGGA +
Preference number: 4 (lower is better)
Translates to: CKSLATSIQMGHSLAPFIRHLDI*VVADAG
Trigger: TCCGGCATCAGCAACCACTCAAATATCCAGGTGTCT...GATGAAGGGGGCTAAGCTATGGCCCATCTGTATGCTGGTAGCTAGTGATTTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp GACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTGCAGTAGACACCTGGATATTTaGGTGGTTGCTGATGCCGGA +
Preference number: 4 (lower is better)
Translates to: DGKIECSPHFPKAPVCCSRHLDI*VVADAG
Trigger: TCCGGCATCAGCAACCACTCAAATATCCAGGTGTCT...ACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp ACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGCTTCCTGGTTGTTGTTATCCACAATaGACATCAGAAAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: TVVAADKCGTSLGPVLPGCCYPQ*TSERAC
Trigger: ACAGGCCCTTTCTGATGTTCATTGTGGATAACAACA...ACCAGGAAGCACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp ACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTGCAGTCCCCACTCACCTCTGCTaGCTTGGATACCTGAAATGT +
Preference number: 4 (lower is better)
Translates to: TARLNVLHISPRHLYVAVPTHLC*LGYLKC
Trigger: ACATTTCAGGTATCCAAGGCAGCAGAGGTGAGTGGG...GACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329597.12
CDS-3UTR GCA 90 bp TTCCCTTCTTCCACTCCCAGCCAGGCCCATCAGATTATAACTATATCCACAAAAAGGCCCTCCAGGATCTaGATCTTTGTGCTGGACCCA +
Preference number: 4 (lower is better)
Translates to: FPSSTPSQAHQIITISTKRPSRI*IFVLDP
Trigger: TGGGTCCAGCACAAAGATGCAGATCCTGGAGGGCCT...TTTTGTGGATATAGTTATAATCTGATGGGCCTGGCTGGGAGTGGAAGAAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp CCCCAGCCTTTCTATATGATTTCAGGAGTTCTTGGGTCACAGCAAGAATCTGATAGGCCCTCCAGGATCTaGATCTTTGTGCTGGACCCA +
Preference number: 4 (lower is better)
Translates to: PQPFYMISGVLGSQQESDRPSRI*IFVLDP
Trigger: TGGGTCCAGCACAAAGATGCAGATCCTGGAGGGCCT...ATCAGATTCTTGCTGTGACCCAAGAACTCCTGAAATCATATAGAAAGGCTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp ACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGCTTCCTGGTGCCCTTCGTTTGCTTTaGCACATAATCATTGATCTG +
Preference number: 4 (lower is better)
Translates to: TVVAADKCGTSLGPVLPGALRLL*HIIIDL
Trigger: CAGATCAATGATTATGTGGCAAAGCAAACGAAGGGC...ACCAGGAAGCACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp GTCACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTCCAAGGGGCGGTTCACTTTaGCAAGGAAGAGGATGTTGT +
Preference number: 4 (lower is better)
Translates to: VTQHIRTETVAPFQTPIPRGGSL*QGRGCC
Trigger: ACAACATCCTCTTCCTTGGCAAAGTGAACCGCCCCT...TGGAATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp ATAGTGACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTACCGTGGCACCTACATaGAGGTCCTCGACTCTCTTC +
Preference number: 4 (lower is better)
Translates to: IVTARLNVLHISPRHLYVTVAPT*RSSTLF
Trigger: GAAGAGAGTCGAGGACCTCCATGTAGGTGCCACGGT...AACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGTCACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp AACAGTAGCCCCATTTCAGACTCCCATTCCAACATTTTTCCCATGCAGGATGAATTCTCTGAGCTTTTCTaGAGGTTGAGGCCCAGGCCC +
Preference number: 4 (lower is better)
Translates to: NSSPISDSHSNIFPMQDEFSELF*RLRPRP
Trigger: GGGCCTGGGCCTCAACCTCCAGAAAAGCTCAGAGAA...TTCATCCTGCATGGGAAAAATGTTGGAATGGGAGTCTGAAATGGGGCTACTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp TCACTAGCTACCAGCATACAGATGGGCCATAGCTTAGCCCCCTTCATCTCCCACGATAGGAGCCCTCAATaGAGAATTTGGGAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: SLATSIQMGHSLAPFISHDRSPQ*RIWEGK
Trigger: TTTACCTTCCCAAATTCTCCATTGAGGGCTCCTATC...GTGGGAGATGAAGGGGGCTAAGCTATGGCCCATCTGTATGCTGGTAGCTAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp ACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTCCAACACCGGACAGATCAGCATaGGAGGTGAAGACGTTACTG +
Preference number: 4 (lower is better)
Translates to: TQHIRTETVAPFQTPIPTPDRSA*EVKTLL
Trigger: CAGTAACGTCTTCACCTCCCATGCTGATCTGTCCGG...TGTTGGAATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp ACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGCTTCCTGGTTATGTTGCAGTCGTGTaGGTGGAAGCAATCATCATA +
Preference number: 4 (lower is better)
Translates to: TVVAADKCGTSLGPVLPGYVAVV*VEAIII
Trigger: TATGATGATTGCTTCCACCCACACGACTGCAACATA...ACCAGGAAGCACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp ACTGGAACATCCCTCCTATTGAGCTTTGTGGCACTGAGCTGGGCATCAAGGGCCCAAAAAGTTAGTCATTaGCACCTGCAACTGATACTC +
Preference number: 4 (lower is better)
Translates to: TGTSLLLSFVALSWASRAQKVSH*HLQLIL
Trigger: GAGTATCAGTTGCAGGTGCCAATGACTAACTTTTTG...GGCCCTTGATGCCCAGCTCAGTGCCACAAAGCTCAATAGGAGGGATGTTCCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp GGAAAGTGTTGTCCCAATGTCACACAGCACATTAGGACTGAAACAGTAGCCCCATATTTGAGTGGTTGCTaGTGCCGGACAGATCAGCAT +
Preference number: 4 (lower is better)
Translates to: GKCCPNVTQHIRTETVAPYLSGC*CRTDQH
Trigger: ATGCTGATCTGTCCGGCATCAGCAACCACTCAAATA...TGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGACATTGGGACAACACTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp GGAAAGTGTTGTCCCAATGTCACACAGCACATTAGGACTGAAACAGTAGCCCCATTTTCCCATGCAGGATaGACTGACAGTTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GKCCPNVTQHIRTETVAPFSHAG*TDSCCC
Trigger: GCAGCAACAACTGTCAGTTCATCCTGCATGGGAAAA...TGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGACATTGGGACAACACTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp ACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTCCAACAGGTAGGGAAAGTGTCTaGCAGGTACAGCGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: TQHIRTETVAPFQTPIPTGRESV*QVQRLH
Trigger: ATGAAGACGCTGTACCTGGCAGACACTTTCCCTACC...TGTTGGAATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp TTCCCTTCTTCCACTCCCAGCCAGGCCCATCAGATTATAACTATATCCACAAAATCCACCACAGCTTTGTaGACCATCTCAGACACCTGG +
Preference number: 4 (lower is better)
Translates to: FPSSTPSQAHQIITISTKSTTAL*TISDTW
Trigger: CCAGGTGTCTGAGATGGTGCACAAAGCTGTGGTGGA...TTTTGTGGATATAGTTATAATCTGATGGGCCTGGCTGGGAGTGGAAGAAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp ATAGTGACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTTCCACCACAGCTTTGTaGACCATCTCAGACACCTGG +
Preference number: 4 (lower is better)
Translates to: IVTARLNVLHISPRHLYVSTTAL*TISDTW
Trigger: CCAGGTGTCTGAGATGGTGCACAAAGCTGTGGTGGA...AACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGTCACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp CCCCAGCCTTTCTATATGATTTCAGGAGTTCTTGGGTCACAGCAAGAATCTGATTCCACCACAGCTTTGTaGACCATCTCAGACACCTGG +
Preference number: 4 (lower is better)
Translates to: PQPFYMISGVLGSQQESDSTTAL*TISDTW
Trigger: CCAGGTGTCTGAGATGGTGCACAAAGCTGTGGTGGA...ATCAGATTCTTGCTGTGACCCAAGAACTCCTGAAATCATATAGAAAGGCTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp GACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTGCAGTGGAGGAAGAGCTGCATaGTGGCTGTTCTTTGTTCTA +
Preference number: 4 (lower is better)
Translates to: DGKIECSPHFPKAPVCCSGGRAA*WLFFVL
Trigger: TAGAACAAAGAACAGCCACCATGCAGCTCTTCCTCC...ACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329597.12
ENST00000554276.1
CDS-3UTR CCA 90 bp GTCACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTCCAGGAGGAAGAGCTGCATaGTGGCTGTTCTTTGTTCTA +
Preference number: 4 (lower is better)
Translates to: VTQHIRTETVAPFQTPIPGGRAA*WLFFVL
Trigger: TAGAACAAAGAACAGCCACCATGCAGCTCTTCCTCC...TGGAATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329597.12
ENST00000554276.1
CDS-3UTR CCA 90 bp TGGACCTCTCTTTGCCACTACCATGCTGGTGAACTTGAGCAAGTCATCCAGCCTGATAGGAGCCCTCAATaGAGAATTTGGGAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: WTSLCHYHAGELEQVIQPDRSPQ*RIWEGK
Trigger: TTTACCTTCCCAAATTCTCCATTGAGGGCTCCTATC...AGGCTGGATGACTTGCTCAAGTTCACCAGCATGGTAGTGGCAAAGAGAGGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp CCCCAGCCTTTCTATATGATTTCAGGAGTTCTTGGGTCACAGCAAGAATCTGATCCGGACAGATCAGCATaGGAGGTGAAGACGTTACTG +
Preference number: 4 (lower is better)
Translates to: PQPFYMISGVLGSQQESDPDRSA*EVKTLL
Trigger: CAGTAACGTCTTCACCTCCCATGCTGATCTGTCCGG...ATCAGATTCTTGCTGTGACCCAAGAACTCCTGAAATCATATAGAAAGGCTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp GACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTGCAGTACCTGGATATTTGAGTaGTTGCTGATGCCGGACAGA +
Preference number: 4 (lower is better)
Translates to: DGKIECSPHFPKAPVCCSTWIFE*LLMPDR
Trigger: TCTGTCCGGCATCAGCAACCACTCAAATATCCAGGT...ACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp ACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTGCAGTCACCTGGATATTTGAGTaGTTGCTGATGCCGGACAGA +
Preference number: 4 (lower is better)
Translates to: TARLNVLHISPRHLYVAVTWIFE*LLMPDR
Trigger: TCTGTCCGGCATCAGCAACCACTCAAATATCCAGGT...GACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp CAGCCTTTCTATATGATTTCAGGAGTTCTTGGGTCACAGCAAGAATCTGATCCTCAAGGGCCAGGACTCTaGACCTCTCTTTGCCACTAC +
Preference number: 4 (lower is better)
Translates to: QPFYMISGVLGSQQESDPQGPGL*TSLCHY
Trigger: GTAGTGGCAAAGAGAGGTCCAGAGTCCTGGCCCTTG...AGGATCAGATTCTTGCTGTGACCCAAGAACTCCTGAAATCATATAGAAAGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp AATGTCACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTGTGGCCCTCATCCACTaGAACATCCCTCCTATTGAG +
Preference number: 4 (lower is better)
Translates to: NVTQHIRTETVAPFQTPIVALIH*NIPPIE
Trigger: CTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCAC...AATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp CCCCAGCCTTTCTATATGATTTCAGGAGTTCTTGGGTCACAGCAAGAATCTGATCTGTTCTTTGTTCTATaGGGAAACGGAGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PQPFYMISGVLGSQQESDLFFVL*GNGGSA
Trigger: GGCAGAGCCTCCGTTTCCTCATAGAACAAAGAACAG...ATCAGATTCTTGCTGTGACCCAAGAACTCCTGAAATCATATAGAAAGGCTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329597.12
ENST00000554276.1
CDS-3UTR TCA 90 bp ACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTCCAACATTGCCACATAATCATTaGTCTGCTTCATGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: TQHIRTETVAPFQTPIPTLPHNH*SASWPL
Trigger: CAGGGGCCATGAAGCAGATCAATGATTATGTGGCAA...TGTTGGAATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp AATGTCACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTAGACACCTGGATATTTaGGTGGTTGCTGATGCCGGA +
Preference number: 4 (lower is better)
Translates to: NVTQHIRTETVAPFQTPIRHLDI*VVADAG
Trigger: TCCGGCATCAGCAACCACTCAAATATCCAGGTGTCT...AATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp ATAGTGACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTAGACACCTGGATATTTaGGTGGTTGCTGATGCCGGA +
Preference number: 4 (lower is better)
Translates to: IVTARLNVLHISPRHLYVRHLDI*VVADAG
Trigger: TCCGGCATCAGCAACCACTCAAATATCCAGGTGTCT...AACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGTCACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp ACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTGCAGTCGTCACAGCAAGAATCTaGTCCTTGTATACAGAGGGA +
Preference number: 4 (lower is better)
Translates to: TARLNVLHISPRHLYVAVVTARI*SLYTEG
Trigger: TCCCTCTGTATACAAGGATCAGATTCTTGCTGTGAC...GACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp ACATTTCCCCAAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCAGCCCTTCGTTTGCTTTaGCACATAATCATTGATCTG +
Preference number: 4 (lower is better)
Translates to: TFPQGTCMLQSCGWKQSSALRLL*HIIIDL
Trigger: CAGATCAATGATTATGTGGCAAAGCAAACGAAGGGC...TGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTTGGGGAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp ATAGTGACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTTCTTGGGTGCCTTTGTaGTTGAAGCTTGTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: IVTARLNVLHISPRHLYVSWVPL*LKLVSH
Trigger: GTGGGAGACAAGCTTCAACCACAAAGGCACCCAAGA...AACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGTCACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp GGAAAGTGTTGTCCCAATGTCACACAGCACATTAGGACTGAAACAGTAGCCCCACCTCAATGGAGAATTTaGGAAGGTAAAGCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: GKCCPNVTQHIRTETVAPPQWRI*EGKARA
Trigger: AGCTCGAGCTTTACCTTCCCAAATTCTCCATTGAGG...TGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGACATTGGGACAACACTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp TGTAAATCACTAGCTACCAGCATACAGATGGGCCATAGCTTAGCCCCCTTCATCACCATCTCAGACACCTaGATATTTGAGTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: CKSLATSIQMGHSLAPFITISDT*IFEWLL
Trigger: CAGCAACCACTCAAATATCCAGGTGTCTGAGATGGT...GATGAAGGGGGCTAAGCTATGGCCCATCTGTATGCTGGTAGCTAGTGATTTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp ACATTTCCCCAAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCATATGTTGCAGTCGTGTaGGTGGAAGCAATCATCATA +
Preference number: 4 (lower is better)
Translates to: TFPQGTCMLQSCGWKQSSYVAVV*VEAIII
Trigger: TATGATGATTGCTTCCACCCACACGACTGCAACATA...TGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTTGGGGAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp CAGCCTTTCTATATGATTTCAGGAGTTCTTGGGTCACAGCAAGAATCTGATCCTGTGGCCCTCATCCACTaGAACATCCCTCCTATTGAG +
Preference number: 4 (lower is better)
Translates to: QPFYMISGVLGSQQESDPVALIH*NIPPIE
Trigger: CTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCAC...AGGATCAGATTCTTGCTGTGACCCAAGAACTCCTGAAATCATATAGAAAGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp TCATTGGCACCTGCAACTGATACTCTACTATTTGCAAAAGGCTTCCCTTCTTCCTTGCCACATAATCATTaGTCTGCTTCATGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SLAPATDTLLFAKGFPSSLPHNH*SASWPL
Trigger: CAGGGGCCATGAAGCAGATCAATGATTATGTGGCAA...GGAAGAAGGGAAGCCTTTTGCAAATAGTAGAGTATCAGTTGCAGGTGCCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp GACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTGCAGTAGATGTAATTCACCATaGTCACGACCGCATTGCTAT +
Preference number: 4 (lower is better)
Translates to: DGKIECSPHFPKAPVCCSRCNSP*SRPHCY
Trigger: ATAGCAATGCGGTCGTGATCATGGTGAATTACATCT...ACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp AATGTCACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTTATTTGAGTGGTTGCTaGTGCCGGACAGATCAGCAT +
Preference number: 4 (lower is better)
Translates to: NVTQHIRTETVAPFQTPIYLSGC*CRTDQH
Trigger: ATGCTGATCTGTCCGGCATCAGCAACCACTCAAATA...AATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp TGTAAATCACTAGCTACCAGCATACAGATGGGCCATAGCTTAGCCCCCTTCATCTGTTGTTATCCACAATaGACATCAGAAAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: CKSLATSIQMGHSLAPFICCYPQ*TSERAC
Trigger: ACAGGCCCTTTCTGATGTTCATTGTGGATAACAACA...GATGAAGGGGGCTAAGCTATGGCCCATCTGTATGCTGGTAGCTAGTGATTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp TCATTGGCACCTGCAACTGATACTCTACTATTTGCAAAAGGCTTCCCTTCTTCCTTTTCCCATGCAGGATaGACTGACAGTTGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SLAPATDTLLFAKGFPSSFSHAG*TDSCCC
Trigger: GCAGCAACAACTGTCAGTTCATCCTGCATGGGAAAA...GGAAGAAGGGAAGCCTTTTGCAAATAGTAGAGTATCAGTTGCAGGTGCCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp ACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTCCAACAGTCACAGCAAGAATCTaGTCCTTGTATACAGAGGGA +
Preference number: 4 (lower is better)
Translates to: TQHIRTETVAPFQTPIPTVTARI*SLYTEG
Trigger: TCCCTCTGTATACAAGGATCAGATTCTTGCTGTGAC...TGTTGGAATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp TTCCCCAAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCATAGAATTGGCACCTGCAACTaGTACTCTACTATTTGCAAA +
Preference number: 4 (lower is better)
Translates to: FPKAPVCCSRVGGSNHHRIGTCN*YSTICK
Trigger: TTTGCAAATAGTAGAGTATCAGTTGCAGGTGCCAAT...TCTATGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTTGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp TGTAAATCACTAGCTACCAGCATACAGATGGGCCATAGCTTAGCCCCCTTCATCGCCCTTCGTTTGCTTTaGCACATAATCATTGATCTG +
Preference number: 4 (lower is better)
Translates to: CKSLATSIQMGHSLAPFIALRLL*HIIIDL
Trigger: CAGATCAATGATTATGTGGCAAAGCAAACGAAGGGC...GATGAAGGGGGCTAAGCTATGGCCCATCTGTATGCTGGTAGCTAGTGATTTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp CAGCCTTTCTATATGATTTCAGGAGTTCTTGGGTCACAGCAAGAATCTGATCCTTCTTGGGTGCCTTTGTaGTTGAAGCTTGTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: QPFYMISGVLGSQQESDPSWVPL*LKLVSH
Trigger: GTGGGAGACAAGCTTCAACCACAAAGGCACCCAAGA...AGGATCAGATTCTTGCTGTGACCCAAGAACTCCTGAAATCATATAGAAAGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp AAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCATAGAGTAATAACCTGGATATTTGAGTaGTTGCTGATGCCGGACAGA +
Preference number: 4 (lower is better)
Translates to: KAPVCCSRVGGSNHHRVITWIFE*LLMPDR
Trigger: TCTGTCCGGCATCAGCAACCACTCAAATATCCAGGT...TATTACTCTATGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp TCATTGGCACCTGCAACTGATACTCTACTATTTGCAAAAGGCTTCCCTTCTTCCACCTGGATATTTGAGTaGTTGCTGATGCCGGACAGA +
Preference number: 4 (lower is better)
Translates to: SLAPATDTLLFAKGFPSSTWIFE*LLMPDR
Trigger: TCTGTCCGGCATCAGCAACCACTCAAATATCCAGGT...GGAAGAAGGGAAGCCTTTTGCAAATAGTAGAGTATCAGTTGCAGGTGCCAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp TTCTATATGATTTCAGGAGTTCTTGGGTCACAGCAAGAATCTGATCCTTGTATACATCTCTGGGCTGGTTaGGTTCCTGAAGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: FYMISGVLGSQQESDPCIHLWAG*VPEGAA
Trigger: AGCAGCTCCTTCAGGAACTCAACCAGCCCAGAGATG...TATACAAGGATCAGATTCTTGCTGTGACCCAAGAACTCCTGAAATCATATAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp CCCCAGCCTTTCTATATGATTTCAGGAGTTCTTGGGTCACAGCAAGAATCTGATCCCAGCCTTTCTATATaGTTTCAGGAGTTCTTGGGT +
Preference number: 4 (lower is better)
Translates to: PQPFYMISGVLGSQQESDPSLSI*FQEFLG
Trigger: ACCCAAGAACTCCTGAAATCATATAGAAAGGCTGGG...ATCAGATTCTTGCTGTGACCCAAGAACTCCTGAAATCATATAGAAAGGCTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp TGTAAATCACTAGCTACCAGCATACAGATGGGCCATAGCTTAGCCCCCTTCATCATTGGCACCTGCAACTaGTACTCTACTATTTGCAAA +
Preference number: 4 (lower is better)
Translates to: CKSLATSIQMGHSLAPFIIGTCN*YSTICK
Trigger: TTTGCAAATAGTAGAGTATCAGTTGCAGGTGCCAAT...GATGAAGGGGGCTAAGCTATGGCCCATCTGTATGCTGGTAGCTAGTGATTTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp TTCTATATGATTTCAGGAGTTCTTGGGTCACAGCAAGAATCTGATCCTTGTATAAGGCCCTCCAGGATCTaGATCTTTGTGCTGGACCCA +
Preference number: 4 (lower is better)
Translates to: FYMISGVLGSQQESDPCIRPSRI*IFVLDP
Trigger: TGGGTCCAGCACAAAGATGCAGATCCTGGAGGGCCT...TATACAAGGATCAGATTCTTGCTGTGACCCAAGAACTCCTGAAATCATATAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp TTCTATATGATTTCAGGAGTTCTTGGGTCACAGCAAGAATCTGATCCTTGTATACTTACGAAGGTGTCCTaGAGGTCTACCACCAGGTCG +
Preference number: 4 (lower is better)
Translates to: FYMISGVLGSQQESDPCILTKVS*RSTTRS
Trigger: CGACCTGGTGGTAGACCTGCAGGACACCTTCGTAAG...TATACAAGGATCAGATTCTTGCTGTGACCCAAGAACTCCTGAAATCATATAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp ACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTCCAACAGATAGGAGCCCTCAATaGAGAATTTGGGAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: TQHIRTETVAPFQTPIPTDRSPQ*RIWEGK
Trigger: TTTACCTTCCCAAATTCTCCATTGAGGGCTCCTATC...TGTTGGAATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp AAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCATAGAGTAATAACCATCTCAGACACCTaGATATTTGAGTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: KAPVCCSRVGGSNHHRVITISDT*IFEWLL
Trigger: CAGCAACCACTCAAATATCCAGGTGTCTGAGATGGT...TATTACTCTATGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp TCATTGGCACCTGCAACTGATACTCTACTATTTGCAAAAGGCTTCCCTTCTTCCACCATCTCAGACACCTaGATATTTGAGTGGTTGCTG +
Preference number: 4 (lower is better)
Translates to: SLAPATDTLLFAKGFPSSTISDT*IFEWLL
Trigger: CAGCAACCACTCAAATATCCAGGTGTCTGAGATGGT...GGAAGAAGGGAAGCCTTTTGCAAATAGTAGAGTATCAGTTGCAGGTGCCAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp CAAAAAGTTAGTCATTGGCACCTGCAACTGATACTCTACTATTTGCAAAAGGCTCTGTTCTTTGTTCTATaGGGAAACGGAGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: QKVSHWHLQLILYYLQKALFFVL*GNGGSA
Trigger: GGCAGAGCCTCCGTTTCCTCATAGAACAAAGAACAG...AGCCTTTTGCAAATAGTAGAGTATCAGTTGCAGGTGCCAATGACTAACTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000329597.12
ENST00000554276.1
CDS-3UTR TCA 90 bp AACAGTAGCCCCATTTCAGACTCCCATTCCAACATTTTTCCCATGCAGGATGAAAGATGTAATTCACCATaGTCACGACCGCATTGCTAT +
Preference number: 4 (lower is better)
Translates to: NSSPISDSHSNIFPMQDERCNSP*SRPHCY
Trigger: ATAGCAATGCGGTCGTGATCATGGTGAATTACATCT...TTCATCCTGCATGGGAAAAATGTTGGAATGGGAGTCTGAAATGGGGCTACTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp AAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCATAGAGTAATATGTTGTTATCCACAATaGACATCAGAAAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: KAPVCCSRVGGSNHHRVICCYPQ*TSERAC
Trigger: ACAGGCCCTTTCTGATGTTCATTGTGGATAACAACA...TATTACTCTATGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp CCCCAGCCTTTCTATATGATTTCAGGAGTTCTTGGGTCACAGCAAGAATCTGATGGGCCATTTCCACCTTaGTATCCAGATGTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: PQPFYMISGVLGSQQESDGPFPP*YPDVFL
Trigger: AAGAAAAACATCTGGATATCAAGGTGGAAATGGCCC...ATCAGATTCTTGCTGTGACCCAAGAACTCCTGAAATCATATAGAAAGGCTGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp AAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCATAGAGTAATAGGGCCATTTCCACCTTaGTATCCAGATGTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: KAPVCCSRVGGSNHHRVIGPFPP*YPDVFL
Trigger: AAGAAAAACATCTGGATATCAAGGTGGAAATGGCCC...TATTACTCTATGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp TTCTATATGATTTCAGGAGTTCTTGGGTCACAGCAAGAATCTGATCCTTGTATAGGACCCACTCACCTCTaGTGCCTTGGATACCTGAAA +
Preference number: 4 (lower is better)
Translates to: FYMISGVLGSQQESDPCIGPTHL*CLGYLK
Trigger: TTTCAGGTATCCAAGGCAGCAGAGGTGAGTGGGTCC...TATACAAGGATCAGATTCTTGCTGTGACCCAAGAACTCCTGAAATCATATAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329597.12
ENST00000554276.1
CDS-3UTR CCA 90 bp CAGCCTTTCTATATGATTTCAGGAGTTCTTGGGTCACAGCAAGAATCTGATCCTCCTCAATGGAGAATTTaGGAAGGTAAAGCTCGAGCT +
Preference number: 4 (lower is better)
Translates to: QPFYMISGVLGSQQESDPPQWRI*EGKARA
Trigger: AGCTCGAGCTTTACCTTCCCAAATTCTCCATTGAGG...AGGATCAGATTCTTGCTGTGACCCAAGAACTCCTGAAATCATATAGAAAGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp AATGTCACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTGATAGGAGCCCTCAATaGAGAATTTGGGAAGGTAAA +
Preference number: 4 (lower is better)
Translates to: NVTQHIRTETVAPFQTPIDRSPQ*RIWEGK
Trigger: TTTACCTTCCCAAATTCTCCATTGAGGGCTCCTATC...AATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp AATGTCACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTTATGTTGCAGTCGTGTaGGTGGAAGCAATCATCATA +
Preference number: 4 (lower is better)
Translates to: NVTQHIRTETVAPFQTPIYVAVV*VEAIII
Trigger: TATGATGATTGCTTCCACCCACACGACTGCAACATA...AATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp AACAGTAGCCCCATTTCAGACTCCCATTCCAACATTTTTCCCATGCAGGATGAATATGTTGCAGTCGTGTaGGTGGAAGCAATCATCATA +
Preference number: 4 (lower is better)
Translates to: NSSPISDSHSNIFPMQDEYVAVV*VEAIII
Trigger: TATGATGATTGCTTCCACCCACACGACTGCAACATA...TTCATCCTGCATGGGAAAAATGTTGGAATGGGAGTCTGAAATGGGGCTACTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp GTTAGTCATTGGCACCTGCAACTGATACTCTACTATTTGCAAAAGGCTTCCCTTAGATGTAATTCACCATaGTCACGACCGCATTGCTAT +
Preference number: 4 (lower is better)
Translates to: VSHWHLQLILYYLQKASLRCNSP*SRPHCY
Trigger: ATAGCAATGCGGTCGTGATCATGGTGAATTACATCT...AAGGGAAGCCTTTTGCAAATAGTAGAGTATCAGTTGCAGGTGCCAATGACTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR GCA 90 bp GTTAGTCATTGGCACCTGCAACTGATACTCTACTATTTGCAAAAGGCTTCCCTTGCCCTTCGTTTGCTTTaGCACATAATCATTGATCTG +
Preference number: 4 (lower is better)
Translates to: VSHWHLQLILYYLQKASLALRLL*HIIIDL
Trigger: CAGATCAATGATTATGTGGCAAAGCAAACGAAGGGC...AAGGGAAGCCTTTTGCAAATAGTAGAGTATCAGTTGCAGGTGCCAATGACTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp TTCTATATGATTTCAGGAGTTCTTGGGTCACAGCAAGAATCTGATCCTTGTATATCTTGGGTGCCTTTGTaGTTGAAGCTTGTCTCCCAC +
Preference number: 4 (lower is better)
Translates to: FYMISGVLGSQQESDPCISWVPL*LKLVSH
Trigger: GTGGGAGACAAGCTTCAACCACAAAGGCACCCAAGA...TATACAAGGATCAGATTCTTGCTGTGACCCAAGAACTCCTGAAATCATATAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp AACAGTAGCCCCATTTCAGACTCCCATTCCAACATTTTTCCCATGCAGGATGAACAAAAAGTTAGTCATTaGCACCTGCAACTGATACTC +
Preference number: 4 (lower is better)
Translates to: NSSPISDSHSNIFPMQDEQKVSH*HLQLIL
Trigger: GAGTATCAGTTGCAGGTGCCAATGACTAACTTTTTG...TTCATCCTGCATGGGAAAAATGTTGGAATGGGAGTCTGAAATGGGGCTACTGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CCA 90 bp AATGTCACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTCAAAAAGTTAGTCATTaGCACCTGCAACTGATACTC +
Preference number: 4 (lower is better)
Translates to: NVTQHIRTETVAPFQTPIQKVSH*HLQLIL
Trigger: GAGTATCAGTTGCAGGTGCCAATGACTAACTTTTTG...AATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGACATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
3UTR CAA 72 bp GATATCCAGATGTTTTTCTTAAAGGATGAATGGCACTaGAGTGTATTGAAATCAACCACGAATGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: DIQMFFLKDEWH*SVLKSTTNDRA
Trigger: GGCCCTGTCATTCGTGGTTGATTTCAATACACTCAAGTGCCATTCATCCTTTAAGAAAAACATCTGGATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR TCA 90 bp TTCTATATGATTTCAGGAGTTCTTGGGTCACAGCAAGAATCTGATCCTTGTATATGTTGTTATCCACAATaGACATCAGAAAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: FYMISGVLGSQQESDPCICCYPQ*TSERAC
Trigger: ACAGGCCCTTTCTGATGTTCATTGTGGATAACAACA...TATACAAGGATCAGATTCTTGCTGTGACCCAAGAACTCCTGAAATCATATAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS CCA 90 bp GGGCTAGGCCCCCAGGACTTGGATGTCACAGGATGCCTCTGGGCCTaGAGGCAGCTCCTTGGCTGGGTGAGTCCTTCCCACCAGTGCTGT +
Preference number: 5 (lower is better)
Translates to: GLGPQDLDVTGCLWA*RQLLGWVSPSHQCC
Trigger: ACAGCACTGGTGGGAAGGACTCACCCAGCCAAGGAGCTGCCTCCAGGCCCAGAGGCATCCTGTGACATCCAAGTCCTGGGGGCCTAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556730.1
CDS CCA 90 bp GGACTTGGATGTCACAGGATGCCTCTGGGCCTGGAGGCAGCTCCTTaGCTGGGTGAGTCCTTCCCACCAGTGCTGTGTGGCCCTGGTAGG +
Preference number: 5 (lower is better)
Translates to: GLGCHRMPLGLEAAP*LGESFPPVLCGPGR
Trigger: CCTACCAGGGCCACACAGCACTGGTGGGAAGGACTCACCCAGCCAAGGAGCTGCCTCCAGGCCCAGAGGCATCCTGTGACATCCAAGTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556730.1
CDS GCA 90 bp CAGGCGGGCCGACCTGAAAGTGAATATTGTCCCCGTGGCTGCCGCTaGTCTGGTTCCCGACTCGTCCACCTCCACCACAGCTTTGTGCAC +
Preference number: 5 (lower is better)
Translates to: QAGRPESEYCPRGCR*SGSRLVHLHHSFVH
Trigger: GTGCACAAAGCTGTGGTGGAGGTGGACGAGTCGGGAACCAGAGCAGCGGCAGCCACGGGGACAATATTCACTTTCAGGTCGGCCCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS GCA 90 bp GCCTCCCCTTGCTCTGGACTTGGACGTGGGCTGCCCAGAGGTCTCTaGCCACTCTGGCACCACCCTAAGGAACCCAGTTTCCAGCTCTTG +
Preference number: 5 (lower is better)
Translates to: ASPCSGLGRGLPRGL*PLWHHPKEPSFQLL
Trigger: CAAGAGCTGGAAACTGGGTTCCTTAGGGTGGTGCCAGAGTGGGCAGAGACCTCTGGGCAGCCCACGTCCAAGTCCAGAGCAAGGGGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556730.1
CDS CCA 90 bp AAGGTAAAGTCCCTTCTGCTGCTGGGGGCCACCGTGGCACCTACATaGAGGTCCTCGACTCTCTTCTTCATCTCCCGGGGGTGGTGGCGG +
Preference number: 5 (lower is better)
Translates to: KVKSLLLLGATVAPT*RSSTLFFISRGWWR
Trigger: CCGCCACCACCCCCGGGAGATGAAGAAGAGAGTCGAGGACCTCCATGTAGGTGCCACGGTGGCCCCCAGCAGCAGAAGGGACTTTACCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000329597.12
ENST00000553511.1
ENST00000553780.5
ENST00000554220.5
ENST00000554276.1
ENST00000554633.5
ENST00000554866.5
ENST00000555681.1
ENST00000556730.1
ENST00000556775.5
ENST00000557598.1
CDS CCA 90 bp TCCTCTGGCCTCTTTTCTAGGATGAGCCTCCCCTTGCTCTGGACTTaGACGTGGGCTGCCCAGAGGTCTCTGCCCACTCTGGCACCACCC +
Preference number: 5 (lower is better)
Translates to: SSGLFSRMSLPLLWT*TWAAQRSLPTLAPP
Trigger: GGGTGGTGCCAGAGTGGGCAGAGACCTCTGGGCAGCCCACGTCCAAGTCCAGAGCAAGGGGAGGCTCATCCTAGAAAAGAGGCCAGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556730.1
CDS CCA 90 bp GGCACCACCCTAAGGAACCCAGTTTCCAGCTCTTGTCCCTCCAACTaGGCTAGGCCCCCAGGACTTGGATGTCACAGGATGCCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: GTTLRNPVSSSCPSN*ARPPGLGCHRMPLG
Trigger: GCCCAGAGGCATCCTGTGACATCCAAGTCCTGGGGGCCTAGCCCAGTTGGAGGGACAAGAGCTGGAAACTGGGTTCCTTAGGGTGGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556730.1
CDS GCA 90 bp AGAGTTCAGGCGGGCCGACCTGAAAGTGAATATTGTCCCCGTGGCTaGCGCTGCTCTGGTTCCCGACTCGTCCACCTCCACCACAGCTTT +
Preference number: 5 (lower is better)
Translates to: RVQAGRPESEYCPRG*RCSGSRLVHLHHSF
Trigger: AAAGCTGTGGTGGAGGTGGACGAGTCGGGAACCAGAGCAGCGGCAGCCACGGGGACAATATTCACTTTCAGGTCGGCCCGCCTGAACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS CCA 90 bp TGCTCTGGACTTGGACGTGGGCTGCCCAGAGGTCTCTGCCCACTCTaGCACCACCCTAAGGAACCCAGTTTCCAGCTCTTGTCCCTCCAA +
Preference number: 5 (lower is better)
Translates to: CSGLGRGLPRGLCPL*HHPKEPSFQLLSLQ
Trigger: TTGGAGGGACAAGAGCTGGAAACTGGGTTCCTTAGGGTGGTGCCAGAGTGGGCAGAGACCTCTGGGCAGCCCACGTCCAAGTCCAGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556730.1
CDS CCA 90 bp TATGGCTCCTCTGGCCTCTTTTCTAGGATGAGCCTCCCCTTGCTCTaGACTTGGACGTGGGCTGCCCAGAGGTCTCTGCCCACTCTGGCA +
Preference number: 5 (lower is better)
Translates to: YGSSGLFSRMSLPLL*TWTWAAQRSLPTLA
Trigger: TGCCAGAGTGGGCAGAGACCTCTGGGCAGCCCACGTCCAAGTCCAGAGCAAGGGGAGGCTCATCCTAGAAAAGAGGCCAGAGGAGCCATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556730.1
CDS-3UTR CAA 90 bp ACTGGAACATCCCTCCTATTGAGCTTTGTGGCACTGAGCTGGGCATCAAGGGCCAGCCGTGGCATTGCCTaGGTAGGGGACCCCCACCAC +
Preference number: 5 (lower is better)
Translates to: TGTSLLLSFVALSWASRASRGIA*VGDPHH
Trigger: GTGGTGGGGGTCCCCTACCAAGGCAATGCCACGGCT...GGCCCTTGATGCCCAGCTCAGTGCCACAAAGCTCAATAGGAGGGATGTTCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS TCA 90 bp CTGGTGTCCTGGTTTGGCACATGGCAGGGCGCTGTGGTCCTTCTATaGACTCAGACCAGCTACATGCCTGGGACCATCAGCACTGCTGGC +
Preference number: 5 (lower is better)
Translates to: LVSWFGTWQGAVVLL*TQTSYMPGTISTAG
Trigger: GCCAGCAGTGCTGATGGTCCCAGGCATGTAGCTGGTCTGAGTTCATAGAAGGACCACAGCGCCCTGCCATGTGCCAAACCAGGACACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554633.5
CDS CCA 90 bp AACTCTAGAGTCCATCCTCTCCTCGCCTCACATGCCCTCAAGCCCTaGGGACCTCCCTTTGCGGCATCGGTACTTACTGTGTCCCGTAGC +
Preference number: 5 (lower is better)
Translates to: NSRVHPLLASHALKP*GPPFAASVLTVSRS
Trigger: GCTACGGGACACAGTAAGTACCGATGCCGCAAAGGGAGGTCCCCAGGGCTTGAGGGCATGTGAGGCGAGGAGAGGATGGACTCTAGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553511.1
ENST00000555681.1
CDS CCA 90 bp CTGGCCTTGCCCTATGAGGAAACGGAGGCTCTGCCAGAGTTAGTGTaGAGCATAAGGTCACAGAGCTCGGGGGACCCACTCACCTCTGCT +
Preference number: 5 (lower is better)
Translates to: LALPYEETEALPELV*SIRSQSSGDPLTSA
Trigger: AGCAGAGGTGAGTGGGTCCCCCGAGCTCTGTGACCTTATGCTCCACACTAACTCTGGCAGAGCCTCCGTTTCCTCATAGGGCAAGGCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554633.5
CDS CCA 90 bp GCAGGGCGCTGTGGTCCTTCTATGAACTCAGACCAGCTACATGCCTaGGACCATCAGCACTGCTGGCCTTGCCCTATGAGGAAACGGAGG +
Preference number: 5 (lower is better)
Translates to: AGRCGPSMNSDQLHA*DHQHCWPCPMRKRR
Trigger: CCTCCGTTTCCTCATAGGGCAAGGCCAGCAGTGCTGATGGTCCCAGGCATGTAGCTGGTCTGAGTTCATAGAAGGACCACAGCGCCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554633.5
CDS-3UTR CAA 90 bp TGGACCTGTGCTTCCTGGTGGCCCTCATCCACTGGAACATCCCTCCTATTGAGCCCAGGATCTGCATCTTaGTGCTGGACCCAGCCCCCA +
Preference number: 5 (lower is better)
Translates to: WTCASWWPSSTGTSLLLSPGSAS*CWTQPP
Trigger: TGGGGGCTGGGTCCAGCACAAAGATGCAGATCCTGG...GCTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCACCAGGAAGCACAGGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp ACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGCTTCCTGGTAGCCGTGGCATTGCCTaGGTAGGGGACCCCCACCAC +
Preference number: 5 (lower is better)
Translates to: TVVAADKCGTSLGPVLPGSRGIA*VGDPHH
Trigger: GTGGTGGGGGTCCCCTACCAAGGCAATGCCACGGCT...ACCAGGAAGCACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS GCA 90 bp GTGTCTGCCAGGTACAGCGTCTTCATGGCACTTACGAAGGTGTCCTaGAGGTCTACCACCAGGTCGGTGAAAAGGGCATTGCCGAGGCTC +
Preference number: 5 (lower is better)
Translates to: VSARYSVFMALTKVS*RSTTRSVKRALPRL
Trigger: GAGCCTCGGCAATGCCCTTTTCACCGACCTGGTGGTAGACCTGCAGGACACCTTCGTAAGTGCCATGAAGACGCTGTACCTGGCAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554220.5
ENST00000554276.1
ENST00000554866.5
ENST00000556730.1
ENST00000556775.5
ENST00000557598.1
CDS GCA 90 bp CATGGCAGGGCGCTGTGGTCCTTCTATGAACTCAGACCAGCTACATaGCTGGGACCATCAGCACTGCTGGCCTTGCCCTATGAGGAAACG +
Preference number: 5 (lower is better)
Translates to: HGRALWSFYELRPAT*LGPSALLALPYEET
Trigger: CGTTTCCTCATAGGGCAAGGCCAGCAGTGCTGATGGTCCCAGGCATGTAGCTGGTCTGAGTTCATAGAAGGACCACAGCGCCCTGCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554633.5
CDS CCA 90 bp GGTTCCGGTCCAGGAGGTAGTGATACTGATCCTCGCGGCTCATCATaGGTACCCGCACCACAGTCTCCGAGGTCACGTAGAAGTCTTGCT +
Preference number: 5 (lower is better)
Translates to: GSGPGGSDTDPRGSS*VPAPQSPRSRRSLA
Trigger: AGCAAGACTTCTACGTGACCTCGGAGACTGTGGTGCGGGTACCCATGATGAGCCGCGAGGATCAGTATCACTACCTCCTGGACCGGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
ENST00000556730.1
CDS-3UTR CAA 90 bp TTGAGCTTTGTGGCACTGAGCTGGGCATCAAGGGCCAGGACTCTGGACCTCTCTTCGGTGAAAAGGGCATaGCCGAGGCTCAGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: LSFVALSWASRARTLDLSSVKRA*PRLSWK
Trigger: CTTCCAGCTGAGCCTCGGCAATGCCCTTTTCACCGA...AGAGAGGTCCAGAGTCCTGGCCCTTGATGCCCAGCTCAGTGCCACAAAGCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp ATGGGCCATAGCTTAGCCCCCTTCATCTCCCACCCTGAGGCCTGTAGATTTCAGAGTGTGGGACCAGCCTaGGACCTGTGCTTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: MGHSLAPFISHPEACRFQSVGPA*DLCFLV
Trigger: CACCAGGAAGCACAGGTCCAAGGCTGGTCCCACACT...CTGAAATCTACAGGCCTCAGGGTGGGAGATGAAGGGGGCTAAGCTATGGCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS TCA 90 bp GGCTCTCTGGCACTTATAGATGGTTGCCTTCACTCTGTTCGCCCATaGCCTCTTCCCTGTGAGCCCACAGGCACAGTCTGTCCTGGAGTG +
Preference number: 5 (lower is better)
Translates to: GSLALIDGCLHSVRP*PLPCEPTGTVCPGV
Trigger: CACTCCAGGACAGACTGTGCCTGTGGGCTCACAGGGAAGAGGTCATGGGCGAACAGAGTGAAGGCAACCATCTATAAGTGCCAGAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553780.5
CDS TCA 90 bp CAAGGAACAATGGTGGTTATGGCTCCTCTGGCCTCTTTTCTAGGATaGGCCTCCCCTTGCTCTGGACTTGGACGTGGGCTGCCCAGAGGT +
Preference number: 5 (lower is better)
Translates to: QGTMVVMAPLASFLG*ASPCSGLGRGLPRG
Trigger: ACCTCTGGGCAGCCCACGTCCAAGTCCAGAGCAAGGGGAGGCTCATCCTAGAAAAGAGGCCAGAGGAGCCATAACCACCATTGTTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556730.1
CDS CCA 90 bp TGGCCTTCACTCTGGTGTCCTGGTTTGGCACATGGCAGGGCGCTGTaGTCCTTCTATGAACTCAGACCAGCTACATGCCTGGGACCATCA +
Preference number: 5 (lower is better)
Translates to: WPSLWCPGLAHGRAL*SFYELRPATCLGPS
Trigger: TGATGGTCCCAGGCATGTAGCTGGTCTGAGTTCATAGAAGGACCACAGCGCCCTGCCATGTGCCAAACCAGGACACCAGAGTGAAGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554633.5
CDS-3UTR CAA 90 bp TCACTAGCTACCAGCATACAGATGGGCCATAGCTTAGCCCCCTTCATCTCCCACCCAGGATCTGCATCTTaGTGCTGGACCCAGCCCCCA +
Preference number: 5 (lower is better)
Translates to: SLATSIQMGHSLAPFISHPGSAS*CWTQPP
Trigger: TGGGGGCTGGGTCCAGCACAAAGATGCAGATCCTGG...GTGGGAGATGAAGGGGGCTAAGCTATGGCCCATCTGTATGCTGGTAGCTAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp ACTGGAACATCCCTCCTATTGAGCTTTGTGGCACTGAGCTGGGCATCAAGGGCCTCGGTGAAAAGGGCATaGCCGAGGCTCAGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: TGTSLLLSFVALSWASRASVKRA*PRLSWK
Trigger: CTTCCAGCTGAGCCTCGGCAATGCCCTTTTCACCGA...GGCCCTTGATGCCCAGCTCAGTGCCACAAAGCTCAATAGGAGGGATGTTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp GGACCTCTCTTTGCCACTACCATGCTGGTGAACTTGAGCAAGTCATCCAGCCTCAAGGTGCCGTCAGGGTaGGTCTCTGGTGAGGGCTCT +
Preference number: 5 (lower is better)
Translates to: GPLFATTMLVNLSKSSSLKVPSG*VSGEGS
Trigger: AGAGCCCTCACCAGAGACCAACCCTGACGGCACCTT...GAGGCTGGATGACTTGCTCAAGTTCACCAGCATGGTAGTGGCAAAGAGAGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553780.5
CDS TCA 90 bp TCACAGAGCTCGGGGGACCCACTCACCTCTGCTGCCTTGGATACCTaGAACTGCAGAGATGAGACTCCTTCAGAGCTTTGCAGACCCCAA +
Preference number: 5 (lower is better)
Translates to: SQSSGDPLTSAALDT*NCRDETPSELCRPQ
Trigger: TTGGGGTCTGCAAAGCTCTGAAGGAGTCTCATCTCTGCAGTTTCAGGTATCCAAGGCAGCAGAGGTGAGTGGGTCCCCCGAGCTCTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000553511.1
CDS-3UTR CAA 90 bp TGGACCTCTCTTTGCCACTACCATGCTGGTGAACTTGAGCAAGTCATCCAGCCTCCAGGATCTGCATCTTaGTGCTGGACCCAGCCCCCA +
Preference number: 5 (lower is better)
Translates to: WTSLCHYHAGELEQVIQPPGSAS*CWTQPP
Trigger: TGGGGGCTGGGTCCAGCACAAAGATGCAGATCCTGG...AGGCTGGATGACTTGCTCAAGTTCACCAGCATGGTAGTGGCAAAGAGAGGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp ACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGCTTCCTGGTTCGGTGAAAAGGGCATaGCCGAGGCTCAGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: TVVAADKCGTSLGPVLPGSVKRA*PRLSWK
Trigger: CTTCCAGCTGAGCCTCGGCAATGCCCTTTTCACCGA...ACCAGGAAGCACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp GGACCTCTCTTTGCCACTACCATGCTGGTGAACTTGAGCAAGTCATCCAGCCTCTCGGTGAAAAGGGCATaGCCGAGGCTCAGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: GPLFATTMLVNLSKSSSLSVKRA*PRLSWK
Trigger: CTTCCAGCTGAGCCTCGGCAATGCCCTTTTCACCGA...GAGGCTGGATGACTTGCTCAAGTTCACCAGCATGGTAGTGGCAAAGAGAGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp TGGACCTGTGCTTCCTGGTGGCCCTCATCCACTGGAACATCCCTCCTATTGAGCTGCTCTTGGGTGCCTTaGTGGTTGAAGCTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: WTCASWWPSSTGTSLLLSCSWVP*WLKLVS
Trigger: GGAGACAAGCTTCAACCACAAAGGCACCCAAGAGCA...GCTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCACCAGGAAGCACAGGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp ACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTGCAGTCAGCCGTGGCATTGCCTaGGTAGGGGACCCCCACCAC +
Preference number: 5 (lower is better)
Translates to: TARLNVLHISPRHLYVAVSRGIA*VGDPHH
Trigger: GTGGTGGGGGTCCCCTACCAAGGCAATGCCACGGCT...GACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp AACATCCCTCCTATTGAGCTTTGTGGCACTGAGCTGGGCATCAAGGGCCAGGACCAGGGGCGGTTCACTTaGCCAAGGAAGAGGATGTTG +
Preference number: 5 (lower is better)
Translates to: NIPPIELCGTELGIKGQDQGRFT*PRKRML
Trigger: CAACATCCTCTTCCTTGGCAAAGTGAACCGCCCCTG...GTCCTGGCCCTTGATGCCCAGCTCAGTGCCACAAAGCTCAATAGGAGGGATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp ACTGGAACATCCCTCCTATTGAGCTTTGTGGCACTGAGCTGGGCATCAAGGGCCCAAGGCACCTGTATGTaGCAGTCGTGTGGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: TGTSLLLSFVALSWASRAQGTCM*QSCGWK
Trigger: CTTCCACCCACACGACTGCAACATACAGGTGCCTTG...GGCCCTTGATGCCCAGCTCAGTGCCACAAAGCTCAATAGGAGGGATGTTCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp TGGACCTGTGCTTCCTGGTGGCCCTCATCCACTGGAACATCCCTCCTATTGAGCGGAACATCCCTCCTATaGAGCTTTGTGGCACTGAGC +
Preference number: 5 (lower is better)
Translates to: WTCASWWPSSTGTSLLLSGTSLL*SFVALS
Trigger: GCTCAGTGCCACAAAGCTCAATAGGAGGGATGTTCC...GCTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCACCAGGAAGCACAGGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp GATGAACTGACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGAGTGTGGGACCAGCCTaGGACCTGTGCTTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: DELTVVAADKCGTSLGPVSVGPA*DLCFLV
Trigger: CACCAGGAAGCACAGGTCCAAGGCTGGTCCCACACT...CACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGTCAGTTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS CCA 90 bp CCTTCTTCATGGCTTTGGGGCCCAATTATGTGGAGTTCTGGACGCTaGAAATCCAAGGTCAAGGTGCCGTCAGGGTTGGTCTCTGGTGAG +
Preference number: 5 (lower is better)
Translates to: PSSWLWGPIMWSSGR*KSKVKVPSGLVSGE
Trigger: CTCACCAGAGACCAACCCTGACGGCACCTTGACCTTGGATTTCCAGCGTCCAGAACTCCACATAATTGGGCCCCAAAGCCATGAAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553780.5
CDS-3UTR CAA 90 bp TGGACCTGTGCTTCCTGGTGGCCCTCATCCACTGGAACATCCCTCCTATTGAGCTGGGTGCCTTTGTGGTaGAAGCTTGTCTCCCACTTA +
Preference number: 5 (lower is better)
Translates to: WTCASWWPSSTGTSLLLSWVPLW*KLVSHL
Trigger: TAAGTGGGAGACAAGCTTCAACCACAAAGGCACCCA...GCTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCACCAGGAAGCACAGGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp TCACTAGCTACCAGCATACAGATGGGCCATAGCTTAGCCCCCTTCATCTCCCACACCTCCACCACAGCTTaGTGCACCATCTCAGACACC +
Preference number: 5 (lower is better)
Translates to: SLATSIQMGHSLAPFISHTSTTA*CTISDT
Trigger: GGTGTCTGAGATGGTGCACAAAGCTGTGGTGGAGGT...GTGGGAGATGAAGGGGGCTAAGCTATGGCCCATCTGTATGCTGGTAGCTAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp ACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGCTTCCTGGTACCTCCACCACAGCTTaGTGCACCATCTCAGACACC +
Preference number: 5 (lower is better)
Translates to: TVVAADKCGTSLGPVLPGTSTTA*CTISDT
Trigger: GGTGTCTGAGATGGTGCACAAAGCTGTGGTGGAGGT...ACCAGGAAGCACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp ATGGGCCATAGCTTAGCCCCCTTCATCTCCCACCCTGAGGCCTGTAGATTTCAGGGAACATCCCTCCTATaGAGCTTTGTGGCACTGAGC +
Preference number: 5 (lower is better)
Translates to: MGHSLAPFISHPEACRFQGTSLL*SFVALS
Trigger: GCTCAGTGCCACAAAGCTCAATAGGAGGGATGTTCC...CTGAAATCTACAGGCCTCAGGGTGGGAGATGAAGGGGGCTAAGCTATGGCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp ACATTTCCCCAAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCAAGTGTGGGACCAGCCTaGGACCTGTGCTTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: TFPQGTCMLQSCGWKQSSSVGPA*DLCFLV
Trigger: CACCAGGAAGCACAGGTCCAAGGCTGGTCCCACACT...TGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTTGGGGAAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS CCA 90 bp TGTTCTTTGTTCTATGAGGAAACGGAGGCTCTGCCAGAGTTAGTGTaGAGCATAAGGTCACAGAGCTCGGGGGACCCACTCACCTCTGCT +
Preference number: 5 (lower is better)
Translates to: CSLFYEETEALPELV*SIRSQSSGDPLTSA
Trigger: AGCAGAGGTGAGTGGGTCCCCCGAGCTCTGTGACCTTATGCTCCACACTAACTCTGGCAGAGCCTCCGTTTCCTCATAGAACAAAGAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000553511.1
ENST00000554276.1
CDS CCA 90 bp GACACCTGGATATTTGAGTGGTTGCTGATGCCGGACAGATCAGCATaGGAGGTGAAGACGTTACTGATCCCCAGACTGGGGAGGACTTTC +
Preference number: 5 (lower is better)
Translates to: DTWIFEWLLMPDRSA*EVKTLLIPRLGRTF
Trigger: GAAAGTCCTCCCCAGTCTGGGGATCAGTAACGTCTTCACCTCCCATGCTGATCTGTCCGGCATCAGCAACCACTCAAATATCCAGGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS CCA 90 bp TCCTCTTCCTTCTTCATGGCTTTGGGGCCCAATTATGTGGAGTTCTaGACGCTGGAAATCCAAGGTCAAGGTGCCGTCAGGGTTGGTCTC +
Preference number: 5 (lower is better)
Translates to: SSSFFMALGPNYVEF*TLEIQGQGAVRVGL
Trigger: GAGACCAACCCTGACGGCACCTTGACCTTGGATTTCCAGCGTCCAGAACTCCACATAATTGGGCCCCAAAGCCATGAAGAAGGAAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553780.5
CDS CCA 90 bp AGGGCGTGTGTGTCTCCCTGGGGCTGTGTGGGTTTAGGCTGGCCCTaGGGTAGTCTGAAAGTACCTCTTTTTGAACATCTTAAGCCACTT +
Preference number: 5 (lower is better)
Translates to: RACVSPWGCVGLGWP*GSLKVPLFEHLKPL
Trigger: AAGTGGCTTAAGATGTTCAAAAAGAGGTACTTTCAGACTACCCCAGGGCCAGCCTAAACCCACACAGCCCCAGGGAGACACACACGCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556730.1
CDS-3UTR CAA 90 bp GGACCTCTCTTTGCCACTACCATGCTGGTGAACTTGAGCAAGTCATCCAGCCTCGGTCACGTAGAAGTCTaGCTCTTGGGTGCCTTTGTG +
Preference number: 5 (lower is better)
Translates to: GPLFATTMLVNLSKSSSLGHVEV*LLGAFV
Trigger: CACAAAGGCACCCAAGAGCAAGACTTCTACGTGACC...GAGGCTGGATGACTTGCTCAAGTTCACCAGCATGGTAGTGGCAAAGAGAGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp AACAGTAGCCCCATTTCAGACTCCCATTCCAACATTTTTCCCATGCAGGATGAAAGCCGTGGCATTGCCTaGGTAGGGGACCCCCACCAC +
Preference number: 5 (lower is better)
Translates to: NSSPISDSHSNIFPMQDESRGIA*VGDPHH
Trigger: GTGGTGGGGGTCCCCTACCAAGGCAATGCCACGGCT...TTCATCCTGCATGGGAAAAATGTTGGAATGGGAGTCTGAAATGGGGCTACTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp TGTGCTTCCTGGTGGCCCTCATCCACTGGAACATCCCTCCTATTGAGCTTTGTGACCATGCTGGTGAACTaGAGCAAGTCATCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: CASWWPSSTGTSLLLSFVTMLVN*SKSSSL
Trigger: GAGGCTGGATGACTTGCTCAAGTTCACCAGCATGGT...CACAAAGCTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCACCAGGAAGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp ACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGCTTCCTGGTACCATGCTGGTGAACTaGAGCAAGTCATCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: TVVAADKCGTSLGPVLPGTMLVN*SKSSSL
Trigger: GAGGCTGGATGACTTGCTCAAGTTCACCAGCATGGT...ACCAGGAAGCACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS TCA 90 bp GGCACAAGAGGAGGAAGAGCTGCATGGTGGCTGTTCTTTGTTCTATaGGGAAACGGAGGCTCTGCCAGAGTTAGTGTGGAGCATAAGGTC +
Preference number: 5 (lower is better)
Translates to: GTRGGRAAWWLFFVL*GNGGSARVSVEHKV
Trigger: GACCTTATGCTCCACACTAACTCTGGCAGAGCCTCCGTTTCCTCATAGAACAAAGAACAGCCACCATGCAGCTCTTCCTCCTCTTGTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000553511.1
ENST00000554276.1
CDS CCA 90 bp GCTCGAGCTGCCTGGAAAGGGAAAAGGAGCTTTCTTAGACTGTTCTaGGGCATTGGCACACTGAGCCTCACCCCTTGGATTCATAATGCA +
Preference number: 5 (lower is better)
Translates to: ARAAWKGKRSFLRLF*GIGTLSLTPWIHNA
Trigger: TGCATTATGAATCCAAGGGGTGAGGCTCAGTGTGCCAATGCCCCAGAACAGTCTAAGAAAGCTCCTTTTCCCTTTCCAGGCAGCTCGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556730.1
CDS-3UTR CAA 90 bp GGACCTCTCTTTGCCACTACCATGCTGGTGAACTTGAGCAAGTCATCCAGCCTCAGCAAGTCCACAATCTaGCCCTTCGTTTGCTTTGCC +
Preference number: 5 (lower is better)
Translates to: GPLFATTMLVNLSKSSSLSKSTI*PFVCFA
Trigger: GGCAAAGCAAACGAAGGGCAAGATTGTGGACTTGCT...GAGGCTGGATGACTTGCTCAAGTTCACCAGCATGGTAGTGGCAAAGAGAGGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp TGTGCTTCCTGGTGGCCCTCATCCACTGGAACATCCCTCCTATTGAGCTTTGTGAGCAAGTCCACAATCTaGCCCTTCGTTTGCTTTGCC +
Preference number: 5 (lower is better)
Translates to: CASWWPSSTGTSLLLSFVSKSTI*PFVCFA
Trigger: GGCAAAGCAAACGAAGGGCAAGATTGTGGACTTGCT...CACAAAGCTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCACCAGGAAGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp TGGACCTCTCTTTGCCACTACCATGCTGGTGAACTTGAGCAAGTCATCCAGCCTTGCTCTTGGGTGCCTTaGTGGTTGAAGCTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: WTSLCHYHAGELEQVIQPCSWVP*WLKLVS
Trigger: GGAGACAAGCTTCAACCACAAAGGCACCCAAGAGCA...AGGCTGGATGACTTGCTCAAGTTCACCAGCATGGTAGTGGCAAAGAGAGGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp GATGAACTGACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGGGTCACGTAGAAGTCTaGCTCTTGGGTGCCTTTGTG +
Preference number: 5 (lower is better)
Translates to: DELTVVAADKCGTSLGPVGHVEV*LLGAFV
Trigger: CACAAAGGCACCCAAGAGCAAGACTTCTACGTGACC...CACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGTCAGTTCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp TGGACCTCTCTTTGCCACTACCATGCTGGTGAACTTGAGCAAGTCATCCAGCCTGGTCACGTAGAAGTCTaGCTCTTGGGTGCCTTTGTG +
Preference number: 5 (lower is better)
Translates to: WTSLCHYHAGELEQVIQPGHVEV*LLGAFV
Trigger: CACAAAGGCACCCAAGAGCAAGACTTCTACGTGACC...AGGCTGGATGACTTGCTCAAGTTCACCAGCATGGTAGTGGCAAAGAGAGGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp ACATTTCCCCAAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCACAGGGGCGGTTCACTTaGCCAAGGAAGAGGATGTTG +
Preference number: 5 (lower is better)
Translates to: TFPQGTCMLQSCGWKQSSQGRFT*PRKRML
Trigger: CAACATCCTCTTCCTTGGCAAAGTGAACCGCCCCTG...TGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTTGGGGAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp ACATTTCCCCAAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCACAAGGCACCTGTATGTaGCAGTCGTGTGGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: TFPQGTCMLQSCGWKQSSQGTCM*QSCGWK
Trigger: CTTCCACCCACACGACTGCAACATACAGGTGCCTTG...TGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTTGGGGAAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS CCA 90 bp AAGACATTTCCTCTTCCTTCTTCATGGCTTTGGGGCCCAATTATGTaGAGTTCTGGACGCTGGAAATCCAAGGTCAAGGTGCCGTCAGGG +
Preference number: 5 (lower is better)
Translates to: KTFPLPSSWLWGPIM*SSGRWKSKVKVPSG
Trigger: CCCTGACGGCACCTTGACCTTGGATTTCCAGCGTCCAGAACTCCACATAATTGGGCCCCAAAGCCATGAAGAAGGAAGAGGAAATGTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553780.5
CDS-3UTR CAA 90 bp ACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGCTTCCTGGTATGATCACGACCGCATaGCTATCGAGGTTCTTAAGC +
Preference number: 5 (lower is better)
Translates to: TVVAADKCGTSLGPVLPGMITTA*LSRFLS
Trigger: GCTTAAGAACCTCGATAGCAATGCGGTCGTGATCAT...ACCAGGAAGCACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp TGGACCTGTGCTTCCTGGTGGCCCTCATCCACTGGAACATCCCTCCTATTGAGCCCAAGGAAGAGGATGTaGTTATCCACAATGAACATC +
Preference number: 5 (lower is better)
Translates to: WTCASWWPSSTGTSLLLSPRKRM*LSTMNI
Trigger: GATGTTCATTGTGGATAACAACATCCTCTTCCTTGG...GCTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCACCAGGAAGCACAGGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp TGTAAATCACTAGCTACCAGCATACAGATGGGCCATAGCTTAGCCCCCTTCATCCAGGGGCGGTTCACTTaGCCAAGGAAGAGGATGTTG +
Preference number: 5 (lower is better)
Translates to: CKSLATSIQMGHSLAPFIQGRFT*PRKRML
Trigger: CAACATCCTCTTCCTTGGCAAAGTGAACCGCCCCTG...GATGAAGGGGGCTAAGCTATGGCCCATCTGTATGCTGGTAGCTAGTGATTTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp GGAAAGTGTTGTCCCAATGTCACACAGCACATTAGGACTGAAACAGTAGCCCCACAAGGCACCTGTATGTaGCAGTCGTGTGGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: GKCCPNVTQHIRTETVAPQGTCM*QSCGWK
Trigger: CTTCCACCCACACGACTGCAACATACAGGTGCCTTG...TGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGACATTGGGACAACACTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp AAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCATAGAGTAATAAGTGTGGGACCAGCCTaGGACCTGTGCTTCCTGGTG +
Preference number: 5 (lower is better)
Translates to: KAPVCCSRVGGSNHHRVISVGPA*DLCFLV
Trigger: CACCAGGAAGCACAGGTCCAAGGCTGGTCCCACACT...TATTACTCTATGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp TGGACCTCTCTTTGCCACTACCATGCTGGTGAACTTGAGCAAGTCATCCAGCCTTCCTTCTTCATGGCTTaGGGGCCCAATTATGTGGAG +
Preference number: 5 (lower is better)
Translates to: WTSLCHYHAGELEQVIQPSFFMA*GPNYVE
Trigger: CTCCACATAATTGGGCCCCAAAGCCATGAAGAAGGA...AGGCTGGATGACTTGCTCAAGTTCACCAGCATGGTAGTGGCAAAGAGAGGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553780.5
CDS-3UTR CAA 90 bp CTACTATTTGCAAAAGGCTTCCCTTCTTCCACTCCCAGCCAGGCCCATCAGATTAGCAAGTCCACAATCTaGCCCTTCGTTTGCTTTGCC +
Preference number: 5 (lower is better)
Translates to: LLFAKGFPSSTPSQAHQISKSTI*PFVCFA
Trigger: GGCAAAGCAAACGAAGGGCAAGATTGTGGACTTGCT...AATCTGATGGGCCTGGCTGGGAGTGGAAGAAGGGAAGCCTTTTGCAAATAGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp GACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTGCAGTTGCTCTTGGGTGCCTTaGTGGTTGAAGCTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: DGKIECSPHFPKAPVCCSCSWVP*WLKLVS
Trigger: GGAGACAAGCTTCAACCACAAAGGCACCCAAGAGCA...ACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp ATGGGCCATAGCTTAGCCCCCTTCATCTCCCACCCTGAGGCCTGTAGATTTCAGCCAAGGAAGAGGATGTaGTTATCCACAATGAACATC +
Preference number: 5 (lower is better)
Translates to: MGHSLAPFISHPEACRFQPRKRM*LSTMNI
Trigger: GATGTTCATTGTGGATAACAACATCCTCTTCCTTGG...CTGAAATCTACAGGCCTCAGGGTGGGAGATGAAGGGGGCTAAGCTATGGCCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp ACTGGAACATCCCTCCTATTGAGCTTTGTGGCACTGAGCTGGGCATCAAGGGCCCCAAGGAAGAGGATGTaGTTATCCACAATGAACATC +
Preference number: 5 (lower is better)
Translates to: TGTSLLLSFVALSWASRAPRKRM*LSTMNI
Trigger: GATGTTCATTGTGGATAACAACATCCTCTTCCTTGG...GGCCCTTGATGCCCAGCTCAGTGCCACAAAGCTCAATAGGAGGGATGTTCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp GACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTGCAGTACCATGCTGGTGAACTaGAGCAAGTCATCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: DGKIECSPHFPKAPVCCSTMLVN*SKSSSL
Trigger: GAGGCTGGATGACTTGCTCAAGTTCACCAGCATGGT...ACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp TGGACCTGTGCTTCCTGGTGGCCCTCATCCACTGGAACATCCCTCCTATTGAGCAAGGATGAATGGCACTaGAGTGTATTGAAATCAACC +
Preference number: 5 (lower is better)
Translates to: WTCASWWPSSTGTSLLLSKDEWH*SVLKST
Trigger: GGTTGATTTCAATACACTCAAGTGCCATTCATCCTT...GCTCAATAGGAGGGATGTTCCAGTGGATGAGGGCCACCAGGAAGCACAGGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS TCA 90 bp AGGCATCTGCCGCCTGTATTCTTCATGCTTCGGTTTCCTGATCTATaGGCAAGGACACTGGCCCAAGGAAGCAGTTTGCTCTTTTATTGC +
Preference number: 5 (lower is better)
Translates to: RHLPPVFFMLRFPDL*ARTLAQGSSLLFYC
Trigger: GCAATAAAAGAGCAAACTGCTTCCTTGGGCCAGTGTCCTTGCTCATAGATCAGGAAACCGAAGCATGAAGAATACAGGCGGCAGATGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556064.1
CDS-3UTR CAA 90 bp AACATCCCTCCTATTGAGCTTTGTGGCACTGAGCTGGGCATCAAGGGCCAGGACAATCTTGCCCTTCGTTaGCTTTGCCACATAATCATT +
Preference number: 5 (lower is better)
Translates to: NIPPIELCGTELGIKGQDNLALR*LCHIII
Trigger: AATGATTATGTGGCAAAGCAAACGAAGGGCAAGATT...GTCCTGGCCCTTGATGCCCAGCTCAGTGCCACAAAGCTCAATAGGAGGGATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp ATGGGCCATAGCTTAGCCCCCTTCATCTCCCACCCTGAGGCCTGTAGATTTCAGAATCTTGCCCTTCGTTaGCTTTGCCACATAATCATT +
Preference number: 5 (lower is better)
Translates to: MGHSLAPFISHPEACRFQNLALR*LCHIII
Trigger: AATGATTATGTGGCAAAGCAAACGAAGGGCAAGATT...CTGAAATCTACAGGCCTCAGGGTGGGAGATGAAGGGGGCTAAGCTATGGCCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp TTCCCCAAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCATAGAATGATCACGACCGCATaGCTATCGAGGTTCTTAAGC +
Preference number: 5 (lower is better)
Translates to: FPKAPVCCSRVGGSNHHRMITTA*LSRFLS
Trigger: GCTTAAGAACCTCGATAGCAATGCGGTCGTGATCAT...TCTATGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTTGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp GTCACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTCCATGGGTGCCTTTGTGGTaGAAGCTTGTCTCCCACTTA +
Preference number: 5 (lower is better)
Translates to: VTQHIRTETVAPFQTPIPWVPLW*KLVSHL
Trigger: TAAGTGGGAGACAAGCTTCAACCACAAAGGCACCCA...TGGAATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp GACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTGCAGTTGGGTGCCTTTGTGGTaGAAGCTTGTCTCCCACTTA +
Preference number: 5 (lower is better)
Translates to: DGKIECSPHFPKAPVCCSWVPLW*KLVSHL
Trigger: TAAGTGGGAGACAAGCTTCAACCACAAAGGCACCCA...ACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp TTCCCTTCTTCCACTCCCAGCCAGGCCCATCAGATTATAACTATATCCACAAAAACCTCCACCACAGCTTaGTGCACCATCTCAGACACC +
Preference number: 5 (lower is better)
Translates to: FPSSTPSQAHQIITISTKTSTTA*CTISDT
Trigger: GGTGTCTGAGATGGTGCACAAAGCTGTGGTGGAGGT...TTTTGTGGATATAGTTATAATCTGATGGGCCTGGCTGGGAGTGGAAGAAGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp AAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCATAGAGTAATAACCTCCACCACAGCTTaGTGCACCATCTCAGACACC +
Preference number: 5 (lower is better)
Translates to: KAPVCCSRVGGSNHHRVITSTTA*CTISDT
Trigger: GGTGTCTGAGATGGTGCACAAAGCTGTGGTGGAGGT...TATTACTCTATGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS GCA 90 bp ATCGAGGTTCTTAAGCAAGTCCACAATCTTGCCCTTCGTTTGCTTTaGCACATAATCATTGATCTGCTTCATGGCCCCTGCAGAGTCCCT +
Preference number: 5 (lower is better)
Translates to: IEVLKQVHNLALRLL*HIIIDLLHGPCRVP
Trigger: AGGGACTCTGCAGGGGCCATGAAGCAGATCAATGATTATGTGGCAAAGCAAACGAAGGGCAAGATTGTGGACTTGCTTAAGAACCTCGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
ENST00000556730.1
ENST00000556775.5
CDS GCA 90 bp GGTTTCCTGATCTATGAGCAAGGACACTGGCCCAAGGAAGCAGTTTaGTCTTTTATTGCTGCATATCTGGCCAAAAGCCCTACCTTCAGA +
Preference number: 5 (lower is better)
Translates to: GFLIYEQGHWPKEAV*SFIAAYLAKSPTFR
Trigger: TCTGAAGGTAGGGCTTTTGGCCAGATATGCAGCAATAAAAGAGCAAACTGCTTCCTTGGGCCAGTGTCCTTGCTCATAGATCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556064.1
CDS-3UTR CAA 90 bp GGAAAGTGTTGTCCCAATGTCACACAGCACATTAGGACTGAAACAGTAGCCCCACATGGTGGCTGTTCTTaGTTCTATGAGGAAACGGAG +
Preference number: 5 (lower is better)
Translates to: GKCCPNVTQHIRTETVAPHGGCS*FYEETE
Trigger: CTCCGTTTCCTCATAGAACAAAGAACAGCCACCATG...TGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGACATTGGGACAACACTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000329597.12
ENST00000554276.1
CDS-3UTR CAA 90 bp AATGTCACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTGCAGAGTCCCTAAAGTaGGTAGGGAAAGTGTCTGCC +
Preference number: 5 (lower is better)
Translates to: NVTQHIRTETVAPFQTPIAESLK*VGKVSA
Trigger: GGCAGACACTTTCCCTACCAACTTTAGGGACTCTGC...AATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp TTCCCTTCTTCCACTCCCAGCCAGGCCCATCAGATTATAACTATATCCACAAAATGCTCTTGGGTGCCTTaGTGGTTGAAGCTTGTCTCC +
Preference number: 5 (lower is better)
Translates to: FPSSTPSQAHQIITISTKCSWVP*WLKLVS
Trigger: GGAGACAAGCTTCAACCACAAAGGCACCCAAGAGCA...TTTTGTGGATATAGTTATAATCTGATGGGCCTGGCTGGGAGTGGAAGAAGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp AATGTCACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTGGTCACGTAGAAGTCTaGCTCTTGGGTGCCTTTGTG +
Preference number: 5 (lower is better)
Translates to: NVTQHIRTETVAPFQTPIGHVEV*LLGAFV
Trigger: CACAAAGGCACCCAAGAGCAAGACTTCTACGTGACC...AATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp GTTAGTCATTGGCACCTGCAACTGATACTCTACTATTTGCAAAAGGCTTCCCTTCAAGGCACCTGTATGTaGCAGTCGTGTGGGTGGAAG +
Preference number: 5 (lower is better)
Translates to: VSHWHLQLILYYLQKASLQGTCM*QSCGWK
Trigger: CTTCCACCCACACGACTGCAACATACAGGTGCCTTG...AAGGGAAGCCTTTTGCAAATAGTAGAGTATCAGTTGCAGGTGCCAATGACTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp TTCCCTTCTTCCACTCCCAGCCAGGCCCATCAGATTATAACTATATCCACAAAAACCATGCTGGTGAACTaGAGCAAGTCATCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: FPSSTPSQAHQIITISTKTMLVN*SKSSSL
Trigger: GAGGCTGGATGACTTGCTCAAGTTCACCAGCATGGT...TTTTGTGGATATAGTTATAATCTGATGGGCCTGGCTGGGAGTGGAAGAAGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp GATGAACTGACAGTTGTTGCTGCTGATAAGTGTGGGACCAGCCTTGGACCTGTGTGGGCCATTTCCACCTaGATATCCAGATGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: DELTVVAADKCGTSLGPVWAIST*ISRCFS
Trigger: AGAAAAACATCTGGATATCAAGGTGGAAATGGCCCA...CACAGGTCCAAGGCTGGTCCCACACTTATCAGCAGCAACAACTGTCAGTTCATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp GGACCTCTCTTTGCCACTACCATGCTGGTGAACTTGAGCAAGTCATCCAGCCTCCTGATACTCTACTATTaGCAAAAGGCTTCCCTTCTT +
Preference number: 5 (lower is better)
Translates to: GPLFATTMLVNLSKSSSLLILYY*QKASLL
Trigger: AAGAAGGGAAGCCTTTTGCAAATAGTAGAGTATCAG...GAGGCTGGATGACTTGCTCAAGTTCACCAGCATGGTAGTGGCAAAGAGAGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS CCA 90 bp CTGTATTCTTCATGCTTCGGTTTCCTGATCTATGAGCAAGGACACTaGCCCAAGGAAGCAGTTTGCTCTTTTATTGCTGCATATCTGGCC +
Preference number: 5 (lower is better)
Translates to: LYSSCFGFLIYEQGH*PKEAVCSFIAAYLA
Trigger: GGCCAGATATGCAGCAATAAAAGAGCAAACTGCTTCCTTGGGCCAGTGTCCTTGCTCATAGATCAGGAAACCGAAGCATGAAGAATACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556064.1
CDS-3UTR CAA 90 bp TTCCCTTCTTCCACTCCCAGCCAGGCCCATCAGATTATAACTATATCCACAAAAGTGGCTGTTCTTTGTTaGTGTCCCGTAGCTGAGTGT +
Preference number: 5 (lower is better)
Translates to: FPSSTPSQAHQIITISTKVAVLC*CPVAEC
Trigger: ACACTCAGCTACGGGACACAAACAAAGAACAGCCAC...TTTTGTGGATATAGTTATAATCTGATGGGCCTGGCTGGGAGTGGAAGAAGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554866.5
CDS-3UTR CAA 90 bp AAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCATAGAGTAATACATGGTGGCTGTTCTTaGTTCTATGAGGAAACGGAG +
Preference number: 5 (lower is better)
Translates to: KAPVCCSRVGGSNHHRVIHGGCS*FYEETE
Trigger: CTCCGTTTCCTCATAGAACAAAGAACAGCCACCATG...TATTACTCTATGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000329597.12
ENST00000554276.1
CDS-3UTR CAA 90 bp ACATTTCCCCAAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCAAATCTTGCCCTTCGTTaGCTTTGCCACATAATCATT +
Preference number: 5 (lower is better)
Translates to: TFPQGTCMLQSCGWKQSSNLALR*LCHIII
Trigger: AATGATTATGTGGCAAAGCAAACGAAGGGCAAGATT...TGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTTGGGGAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp CAGCCTTTCTATATGATTTCAGGAGTTCTTGGGTCACAGCAAGAATCTGATCCTTGGGTGCCTTTGTGGTaGAAGCTTGTCTCCCACTTA +
Preference number: 5 (lower is better)
Translates to: QPFYMISGVLGSQQESDPWVPLW*KLVSHL
Trigger: TAAGTGGGAGACAAGCTTCAACCACAAAGGCACCCA...AGGATCAGATTCTTGCTGTGACCCAAGAACTCCTGAAATCATATAGAAAGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp CAAAAAGTTAGTCATTGGCACCTGCAACTGATACTCTACTATTTGCAAAAGGCTCAGGGGCGGTTCACTTaGCCAAGGAAGAGGATGTTG +
Preference number: 5 (lower is better)
Translates to: QKVSHWHLQLILYYLQKAQGRFT*PRKRML
Trigger: CAACATCCTCTTCCTTGGCAAAGTGAACCGCCCCTG...AGCCTTTTGCAAATAGTAGAGTATCAGTTGCAGGTGCCAATGACTAACTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp GGAAAGTGTTGTCCCAATGTCACACAGCACATTAGGACTGAAACAGTAGCCCCATGGGCCATTTCCACCTaGATATCCAGATGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: GKCCPNVTQHIRTETVAPWAIST*ISRCFS
Trigger: AGAAAAACATCTGGATATCAAGGTGGAAATGGCCCA...TGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGACATTGGGACAACACTTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp CAAAAAGTTAGTCATTGGCACCTGCAACTGATACTCTACTATTTGCAAAAGGCTAGAGGGCTGGCTGGATaGCAGCCAGCATTTGTCACT +
Preference number: 5 (lower is better)
Translates to: QKVSHWHLQLILYYLQKARGLAG*QPAFVT
Trigger: AGTGACAAATGCTGGCTGCAATCCAGCCAGCCCTCT...AGCCTTTTGCAAATAGTAGAGTATCAGTTGCAGGTGCCAATGACTAACTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554866.5
CDS TCA 90 bp GATGCCCTTATCTCACGGAAGCCGATAATATTGGATCATTGTTCCTaGTTTCTAAAGGCCCAAGACTCCAGGCACAGAAAACAACAGAAG +
Preference number: 5 (lower is better)
Translates to: DALISRKPIILDHCS*FLKAQDSRHRKQQK
Trigger: CTTCTGTTGTTTTCTGTGCCTGGAGTCTTGGGCCTTTAGAAATCAGGAACAATGATCCAATATTATCGGCTTCCGTGAGATAAGGGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556064.1
CDS-3UTR CAA 90 bp GACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTGCAGTAAGGATGAATGGCACTaGAGTGTATTGAAATCAACC +
Preference number: 5 (lower is better)
Translates to: DGKIECSPHFPKAPVCCSKDEWH*SVLKST
Trigger: GGTTGATTTCAATACACTCAAGTGCCATTCATCCTT...ACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp GTCACACAGCACATTAGGACTGAAACAGTAGCCCCATTTCAGACTCCCATTCCACTGATACTCTACTATTaGCAAAAGGCTTCCCTTCTT +
Preference number: 5 (lower is better)
Translates to: VTQHIRTETVAPFQTPIPLILYY*QKASLL
Trigger: AAGAAGGGAAGCCTTTTGCAAATAGTAGAGTATCAG...TGGAATGGGAGTCTGAAATGGGGCTACTGTTTCAGTCCTAATGTGCTGTGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp ACGGCAAGATTGAATGTTCTCCACATTTCCCCAAGGCACCTGTATGTTGCAGTCCTGATACTCTACTATTaGCAAAAGGCTTCCCTTCTT +
Preference number: 5 (lower is better)
Translates to: TARLNVLHISPRHLYVAVLILYY*QKASLL
Trigger: AAGAAGGGAAGCCTTTTGCAAATAGTAGAGTATCAG...GACTGCAACATACAGGTGCCTTGGGGAAATGTGGAGAACATTCAATCTTGCCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp CAAAAAGTTAGTCATTGGCACCTGCAACTGATACTCTACTATTTGCAAAAGGCTAGCAAGTCCACAATCTaGCCCTTCGTTTGCTTTGCC +
Preference number: 5 (lower is better)
Translates to: QKVSHWHLQLILYYLQKASKSTI*PFVCFA
Trigger: GGCAAAGCAAACGAAGGGCAAGATTGTGGACTTGCT...AGCCTTTTGCAAATAGTAGAGTATCAGTTGCAGGTGCCAATGACTAACTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp AACAGTAGCCCCATTTCAGACTCCCATTCCAACATTTTTCCCATGCAGGATGAATGGGCCATTTCCACCTaGATATCCAGATGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: NSSPISDSHSNIFPMQDEWAIST*ISRCFS
Trigger: AGAAAAACATCTGGATATCAAGGTGGAAATGGCCCA...TTCATCCTGCATGGGAAAAATGTTGGAATGGGAGTCTGAAATGGGGCTACTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp AAGGCACCTGTATGTTGCAGTCGTGTGGGTGGAAGCAATCATCATAGAGTAATAAATCTTGCCCTTCGTTaGCTTTGCCACATAATCATT +
Preference number: 5 (lower is better)
Translates to: KAPVCCSRVGGSNHHRVINLALR*LCHIII
Trigger: AATGATTATGTGGCAAAGCAAACGAAGGGCAAGATT...TATTACTCTATGATGATTGCTTCCACCCACACGACTGCAACATACAGGTGCCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp CAAAAAGTTAGTCATTGGCACCTGCAACTGATACTCTACTATTTGCAAAAGGCTATGATCACGACCGCATaGCTATCGAGGTTCTTAAGC +
Preference number: 5 (lower is better)
Translates to: QKVSHWHLQLILYYLQKAMITTA*LSRFLS
Trigger: GCTTAAGAACCTCGATAGCAATGCGGTCGTGATCAT...AGCCTTTTGCAAATAGTAGAGTATCAGTTGCAGGTGCCAATGACTAACTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp CCCCAGCCTTTCTATATGATTTCAGGAGTTCTTGGGTCACAGCAAGAATCTGATAAGGATGAATGGCACTaGAGTGTATTGAAATCAACC +
Preference number: 5 (lower is better)
Translates to: PQPFYMISGVLGSQQESDKDEWH*SVLKST
Trigger: GGTTGATTTCAATACACTCAAGTGCCATTCATCCTT...ATCAGATTCTTGCTGTGACCCAAGAACTCCTGAAATCATATAGAAAGGCTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS-3UTR CAA 90 bp TTCTATATGATTTCAGGAGTTCTTGGGTCACAGCAAGAATCTGATCCTTGTATAATGATCACGACCGCATaGCTATCGAGGTTCTTAAGC +
Preference number: 5 (lower is better)
Translates to: FYMISGVLGSQQESDPCIMITTA*LSRFLS
Trigger: GCTTAAGAACCTCGATAGCAATGCGGTCGTGATCAT...TATACAAGGATCAGATTCTTGCTGTGACCCAAGAACTCCTGAAATCATATAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000554276.1
ENST00000554866.5
CDS GCA 72 bp GCGGGCCGACCTGAAAGTGAATATTGTCCCCGTGGCTaGCGCTGCTCTGGTTCCCGACTCGTCCACCTCCAC +
Preference number: 6 (lower is better)
Translates to: AGRPESEYCPRG*RCSGSRLVHLH
Trigger: GTGGAGGTGGACGAGTCGGGAACCAGAGCAGCGGCAGCCACGGGGACAATATTCACTTTCAGGTCGGCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS GCA 72 bp GATGAGCCTCCCCTTGCTCTGGACTTGGACGTGGGCTaGCCAGAGGTCTCTGCCCACTCTGGCACCACCCTA +
Preference number: 6 (lower is better)
Translates to: DEPPLALDLDVG*PEVSAHSGTTL
Trigger: TAGGGTGGTGCCAGAGTGGGCAGAGACCTCTGGGCAGCCCACGTCCAAGTCCAGAGCAAGGGGAGGCTCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556730.1
CDS CAA 72 bp GCTCTTGTCCCTCCAACTGGGCTAGGCCCCCAGGACTaGGATGTCACAGGATGCCTCTGGGCCTGGAGGCAG +
Preference number: 6 (lower is better)
Translates to: ALVPPTGLGPQD*DVTGCLWAWRQ
Trigger: CTGCCTCCAGGCCCAGAGGCATCCTGTGACATCCAAGTCCTGGGGGCCTAGCCCAGTTGGAGGGACAAGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556730.1
CDS CAA 90 bp CAGTTTCCAGCTCTTGTCCCTCCAACTGGGCTAGGCCCCCAGGACTaGGATGTCACAGGATGCCTCTGGGCCTGGAGGCAGCTCCTTGGC +
Preference number: 6 (lower is better)
Translates to: QFPALVPPTGLGPQD*DVTGCLWAWRQLLG
Trigger: GCCAAGGAGCTGCCTCCAGGCCCAGAGGCATCCTGTGACATCCAAGTCCTGGGGGCCTAGCCCAGTTGGAGGGACAAGAGCTGGAAACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556730.1
CDS GCA 72 bp CCGTGGCATTGCCTTGGTAGGGGACCCCCACCACCCTaGAGGAGAGGTTCCGGTCCAGGAGGTAGTGATACT +
Preference number: 6 (lower is better)
Translates to: PWHCLGRGPPPP*RRGSGPGGSDT
Trigger: AGTATCACTACCTCCTGGACCGGAACCTCTCCTGCAGGGTGGTGGGGGTCCCCTACCAAGGCAATGCCACGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
ENST00000556730.1
CDS CCA 72 bp TCTAGGATGAGCCTCCCCTTGCTCTGGACTTGGACGTaGGCTGCCCAGAGGTCTCTGCCCACTCTGGCACCA +
Preference number: 6 (lower is better)
Translates to: SRMSLPLLWTWT*AAQRSLPTLAP
Trigger: TGGTGCCAGAGTGGGCAGAGACCTCTGGGCAGCCCACGTCCAAGTCCAGAGCAAGGGGAGGCTCATCCTAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556730.1
CDS GCA 72 bp CGACCTGAAAGTGAATATTGTCCCCGTGGCTGCCGCTaGTCTGGTTCCCGACTCGTCCACCTCCACCACAGC +
Preference number: 6 (lower is better)
Translates to: RPESEYCPRGCR*SGSRLVHLHHS
Trigger: GCTGTGGTGGAGGTGGACGAGTCGGGAACCAGAGCAGCGGCAGCCACGGGGACAATATTCACTTTCAGGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS CCA 72 bp GTCCATCCTCTCCTCGCCTCACATGCCCTCAAGCCCTaGGGACCTCCCTTTGCGGCATCGGTACTTACTGTG +
Preference number: 6 (lower is better)
Translates to: VHPLLASHALKP*GPPFAASVLTV
Trigger: CACAGTAAGTACCGATGCCGCAAAGGGAGGTCCCCAGGGCTTGAGGGCATGTGAGGCGAGGAGAGGATGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000553511.1
ENST00000555681.1
CDS CCA 72 bp CTGTCCTTCATGAGCAGCTGCCATGACCGGCCTGGGTaGCAGCCTCCAGGCAAGATGCCCTTATCTCACGGA +
Preference number: 6 (lower is better)
Translates to: LSFMSSCHDRPG*QPPGKMPLSHG
Trigger: TCCGTGAGATAAGGGCATCTTGCCTGGAGGCTGCCACCCAGGCCGGTCATGGCAGCTGCTCATGAAGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556064.1
CDS CCA 72 bp CTTGGACGTGGGCTGCCCAGAGGTCTCTGCCCACTCTaGCACCACCCTAAGGAACCCAGTTTCCAGCTCTTG +
Preference number: 6 (lower is better)
Translates to: LGRGLPRGLCPL*HHPKEPSFQLL
Trigger: CAAGAGCTGGAAACTGGGTTCCTTAGGGTGGTGCCAGAGTGGGCAGAGACCTCTGGGCAGCCCACGTCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556730.1
CDS CCA 72 bp TCTGGCCTCTTTTCTAGGATGAGCCTCCCCTTGCTCTaGACTTGGACGTGGGCTGCCCAGAGGTCTCTGCCC +
Preference number: 6 (lower is better)
Translates to: SGLFSRMSLPLL*TWTWAAQRSLP
Trigger: GGGCAGAGACCTCTGGGCAGCCCACGTCCAAGTCCAGAGCAAGGGGAGGCTCATCCTAGAAAAGAGGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556730.1
CDS CAA 72 bp TCGCCTCACATGCCCTCAAGCCCTGGGGACCTCCCTTaGCGGCATCGGTACTTACTGTGTCCCGTAGCTGAG +
Preference number: 6 (lower is better)
Translates to: SPHMPSSPGDLP*RHRYLLCPVAE
Trigger: CTCAGCTACGGGACACAGTAAGTACCGATGCCGCAAAGGGAGGTCCCCAGGGCTTGAGGGCATGTGAGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000553511.1
ENST00000555681.1
CDS CAA 72 bp GGCTCCTCTGGCCTCTTTTCTAGGATGAGCCTCCCCTaGCTCTGGACTTGGACGTGGGCTGCCCAGAGGTCT +
Preference number: 6 (lower is better)
Translates to: GSSGLFSRMSLP*LWTWTWAAQRS
Trigger: AGACCTCTGGGCAGCCCACGTCCAAGTCCAGAGCAAGGGGAGGCTCATCCTAGAAAAGAGGCCAGAGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556730.1
CDS CAA 90 bp ATCCTCTCCTCGCCTCACATGCCCTCAAGCCCTGGGGACCTCCCTTaGCGGCATCGGTACTTACTGTGTCCCGTAGCTGAGTGTGCACAC +
Preference number: 6 (lower is better)
Translates to: ILSSPHMPSSPGDLP*RHRYLLCPVAECAH
Trigger: GTGTGCACACTCAGCTACGGGACACAGTAAGTACCGATGCCGCAAAGGGAGGTCCCCAGGGCTTGAGGGCATGTGAGGCGAGGAGAGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553511.1
CDS CAA 90 bp GGTGGTTATGGCTCCTCTGGCCTCTTTTCTAGGATGAGCCTCCCCTaGCTCTGGACTTGGACGTGGGCTGCCCAGAGGTCTCTGCCCACT +
Preference number: 6 (lower is better)
Translates to: GGYGSSGLFSRMSLP*LWTWTWAAQRSLPT
Trigger: AGTGGGCAGAGACCTCTGGGCAGCCCACGTCCAAGTCCAGAGCAAGGGGAGGCTCATCCTAGAAAAGAGGCCAGAGGAGCCATAACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556730.1
CDS CCA 72 bp TCAGACCAGCTACATGCCTGGGACCATCAGCACTGCTaGCCTTGCCCTATGAGGAAACGGAGGCTCTGCCAG +
Preference number: 6 (lower is better)
Translates to: SDQLHAWDHQHC*PCPMRKRRLCQ
Trigger: CTGGCAGAGCCTCCGTTTCCTCATAGGGCAAGGCCAGCAGTGCTGATGGTCCCAGGCATGTAGCTGGTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554633.5
CDS CCA 72 bp CTCTTTTCTAGGATGAGCCTCCCCTTGCTCTGGACTTaGACGTGGGCTGCCCAGAGGTCTCTGCCCACTCTG +
Preference number: 6 (lower is better)
Translates to: LFSRMSLPLLWT*TWAAQRSLPTL
Trigger: CAGAGTGGGCAGAGACCTCTGGGCAGCCCACGTCCAAGTCCAGAGCAAGGGGAGGCTCATCCTAGAAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556730.1
CDS CAA 90 bp GAACTCAGACCAGCTACATGCCTGGGACCATCAGCACTGCTGGCCTaGCCCTATGAGGAAACGGAGGCTCTGCCAGAGTTAGTGTGGAGC +
Preference number: 6 (lower is better)
Translates to: ELRPATCLGPSALLA*PYEETEALPELVWS
Trigger: GCTCCACACTAACTCTGGCAGAGCCTCCGTTTCCTCATAGGGCAAGGCCAGCAGTGCTGATGGTCCCAGGCATGTAGCTGGTCTGAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554633.5
CDS TCA 72 bp TGCCAAATTGTTACTGTCCTTCATGAGCAGCTGCCATaGCCGGCCTGGGTGGCAGCCTCCAGGCAAGATGCC +
Preference number: 6 (lower is better)
Translates to: CQIVTVLHEQLP*PAWVAASRQDA
Trigger: GGCATCTTGCCTGGAGGCTGCCACCCAGGCCGGTCATGGCAGCTGCTCATGAAGGACAGTAACAATTTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556064.1
CDS GCA 72 bp TGTGGAGTTCTGGACGCTGGAAATCCAAGGTCAAGGTaGCGTCAGGGTTGGTCTCTGGTGAGGGCTCTCTGG +
Preference number: 6 (lower is better)
Translates to: CGVLDAGNPRSR*RQGWSLVRALW
Trigger: CCAGAGAGCCCTCACCAGAGACCAACCCTGACGGCACCTTGACCTTGGATTTCCAGCGTCCAGAACTCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553780.5
CDS GCA 72 bp AACTCAGACCAGCTACATGCCTGGGACCATCAGCACTaGTGGCCTTGCCCTATGAGGAAACGGAGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: NSDQLHAWDHQH*WPCPMRKRRLC
Trigger: GCAGAGCCTCCGTTTCCTCATAGGGCAAGGCCAGCAGTGCTGATGGTCCCAGGCATGTAGCTGGTCTGAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554633.5
CDS CCA 72 bp CCAGGAGGTAGTGATACTGATCCTCGCGGCTCATCATaGGTACCCGCACCACAGTCTCCGAGGTCACGTAGA +
Preference number: 6 (lower is better)
Translates to: PGGSDTDPRGSS*VPAPQSPRSRR
Trigger: TCTACGTGACCTCGGAGACTGTGGTGCGGGTACCCATGATGAGCCGCGAGGATCAGTATCACTACCTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
ENST00000556730.1
CDS CCA 72 bp CCCTATGAGGAAACGGAGGCTCTGCCAGAGTTAGTGTaGAGCATAAGGTCACAGAGCTCGGGGGACCCACTC +
Preference number: 6 (lower is better)
Translates to: PYEETEALPELV*SIRSQSSGDPL
Trigger: GAGTGGGTCCCCCGAGCTCTGTGACCTTATGCTCCACACTAACTCTGGCAGAGCCTCCGTTTCCTCATAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554633.5
CDS CCA 72 bp TGCATGGTGGCTGTTCTTTGTTGGCACAGTCTGTCCTaGAGTGGACCCCCTGGGTGGCTGTCTCAGCTCTGT +
Preference number: 6 (lower is better)
Translates to: CMVAVLCWHSLS*SGPPGWLSQLC
Trigger: ACAGAGCTGAGACAGCCACCCAGGGGGTCCACTCCAGGACAGACTGTGCCAACAAAGAACAGCCACCATGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554220.5
CDS CAA 72 bp CCAGCTACATGCCTGGGACCATCAGCACTGCTGGCCTaGCCCTATGAGGAAACGGAGGCTCTGCCAGAGTTA +
Preference number: 6 (lower is better)
Translates to: PATCLGPSALLA*PYEETEALPEL
Trigger: TAACTCTGGCAGAGCCTCCGTTTCCTCATAGGGCAAGGCCAGCAGTGCTGATGGTCCCAGGCATGTAGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554633.5
CDS TCA 72 bp TTACGAAGGTGTCCTGCAGGTCTACCACCAGGTCGGTaGAAAGGGCATTGCCGAGGCTCAGCTGGAAGCCAT +
Preference number: 6 (lower is better)
Translates to: LRRCPAGLPPGR*KGHCRGSAGSH
Trigger: ATGGCTTCCAGCTGAGCCTCGGCAATGCCCTTTTCACCGACCTGGTGGTAGACCTGCAGGACACCTTCGTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554220.5
ENST00000554276.1
ENST00000554866.5
ENST00000556730.1
ENST00000556775.5
ENST00000557598.1
CDS TCA 72 bp TGGTTTGGCACATGGCAGGGCGCTGTGGTCCTTCTATaGACTCAGACCAGCTACATGCCTGGGACCATCAGC +
Preference number: 6 (lower is better)
Translates to: WFGTWQGAVVLL*TQTSYMPGTIS
Trigger: GCTGATGGTCCCAGGCATGTAGCTGGTCTGAGTTCATAGAAGGACCACAGCGCCCTGCCATGTGCCAAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554633.5
CDS GCA 72 bp GCCATGACCGGCCTGGGTGGCAGCCTCCAGGCAAGATaGCCTTATCTCACGGAAGCCGATAATATTGGATCA +
Preference number: 6 (lower is better)
Translates to: AMTGLGGSLQAR*PYLTEADNIGS
Trigger: TGATCCAATATTATCGGCTTCCGTGAGATAAGGGCATCTTGCCTGGAGGCTGCCACCCAGGCCGGTCATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556064.1
CDS GCA 72 bp CAAACTGCCAAATTGTTACTGTCCTTCATGAGCAGCTaGCATGACCGGCCTGGGTGGCAGCCTCCAGGCAAG +
Preference number: 6 (lower is better)
Translates to: QTAKLLLSFMSS*HDRPGWQPPGK
Trigger: CTTGCCTGGAGGCTGCCACCCAGGCCGGTCATGGCAGCTGCTCATGAAGGACAGTAACAATTTGGCAGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556064.1
CDS GCA 72 bp GCGCTGTGGTCCTTCTATGAACTCAGACCAGCTACATaGCTGGGACCATCAGCACTGCTGGCCTTGCCCTAT +
Preference number: 6 (lower is better)
Translates to: ALWSFYELRPAT*LGPSALLALPY
Trigger: ATAGGGCAAGGCCAGCAGTGCTGATGGTCCCAGGCATGTAGCTGGTCTGAGTTCATAGAAGGACCACAGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554633.5
CDS CCA 72 bp CTCTGGTGTCCTGGTTTGGCACATGGCAGGGCGCTGTaGTCCTTCTATGAACTCAGACCAGCTACATGCCTG +
Preference number: 6 (lower is better)
Translates to: LWCPGLAHGRAL*SFYELRPATCL
Trigger: CAGGCATGTAGCTGGTCTGAGTTCATAGAAGGACCACAGCGCCCTGCCATGTGCCAAACCAGGACACCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554633.5
CDS CCA 72 bp CTTCCATGTGAGCTTCTGGCCTTCACTCTGGTGTCCTaGTTTGGCACATGGCAGGGCGCTGTGGTCCTTCTA +
Preference number: 6 (lower is better)
Translates to: LPCELLAFTLVS*FGTWQGAVVLL
Trigger: TAGAAGGACCACAGCGCCCTGCCATGTGCCAAACCAGGACACCAGAGTGAAGGCCAGAAGCTCACATGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554633.5
CDS CCA 72 bp CTAAGGAACCCAGTTTCCAGCTCTTGTCCCTCCAACTaGGCTAGGCCCCCAGGACTTGGATGTCACAGGATG +
Preference number: 6 (lower is better)
Translates to: LRNPVSSSCPSN*ARPPGLGCHRM
Trigger: CATCCTGTGACATCCAAGTCCTGGGGGCCTAGCCCAGTTGGAGGGACAAGAGCTGGAAACTGGGTTCCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556730.1
CDS CAA 90 bp AGCTGCTTCCATGTGAGCTTCTGGCCTTCACTCTGGTGTCCTGGTTaGGCACATGGCAGGGCGCTGTGGTCCTTCTATGAACTCAGACCA +
Preference number: 6 (lower is better)
Translates to: SCFHVSFWPSLWCPG*AHGRALWSFYELRP
Trigger: TGGTCTGAGTTCATAGAAGGACCACAGCGCCCTGCCATGTGCCAAACCAGGACACCAGAGTGAAGGCCAGAAGCTCACATGGAAGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554633.5
CDS TCA 72 bp TCGGGGGACCCACTCACCTCTGCTGCCTTGGATACCTaGAACTGCAGAGATGAGACTCCTTCAGAGCTTTGC +
Preference number: 6 (lower is better)
Translates to: SGDPLTSAALDT*NCRDETPSELC
Trigger: GCAAAGCTCTGAAGGAGTCTCATCTCTGCAGTTTCAGGTATCCAAGGCAGCAGAGGTGAGTGGGTCCCCCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000553511.1
CDS CCA 72 bp TTCTATGAGGAAACGGAGGCTCTGCCAGAGTTAGTGTaGAGCATAAGGTCACAGAGCTCGGGGGACCCACTC +
Preference number: 6 (lower is better)
Translates to: FYEETEALPELV*SIRSQSSGDPL
Trigger: GAGTGGGTCCCCCGAGCTCTGTGACCTTATGCTCCACACTAACTCTGGCAGAGCCTCCGTTTCCTCATAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000553511.1
ENST00000554276.1
CDS CCA 72 bp TGGCTTTGGGGCCCAATTATGTGGAGTTCTGGACGCTaGAAATCCAAGGTCAAGGTGCCGTCAGGGTTGGTC +
Preference number: 6 (lower is better)
Translates to: WLWGPIMWSSGR*KSKVKVPSGLV
Trigger: GACCAACCCTGACGGCACCTTGACCTTGGATTTCCAGCGTCCAGAACTCCACATAATTGGGCCCCAAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553780.5
CDS CCA 72 bp TGTGGTCCTTCTATGAACTCAGACCAGCTACATGCCTaGGACCATCAGCACTGCTGGCCTTGCCCTATGAGG +
Preference number: 6 (lower is better)
Translates to: CGPSMNSDQLHA*DHQHCWPCPMR
Trigger: CCTCATAGGGCAAGGCCAGCAGTGCTGATGGTCCCAGGCATGTAGCTGGTCTGAGTTCATAGAAGGACCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554633.5
CDS CAA 72 bp GGACGCTGGAAATCCAAGGTCAAGGTGCCGTCAGGGTaGGTCTCTGGTGAGGGCTCTCTGGCACTTATAGAT +
Preference number: 6 (lower is better)
Translates to: GRWKSKVKVPSG*VSGEGSLALID
Trigger: ATCTATAAGTGCCAGAGAGCCCTCACCAGAGACCAACCCTGACGGCACCTTGACCTTGGATTTCCAGCGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553780.5
CDS CAA 72 bp CATGTGAGCTTCTGGCCTTCACTCTGGTGTCCTGGTTaGGCACATGGCAGGGCGCTGTGGTCCTTCTATGAA +
Preference number: 6 (lower is better)
Translates to: HVSFWPSLWCPG*AHGRALWSFYE
Trigger: TTCATAGAAGGACCACAGCGCCCTGCCATGTGCCAAACCAGGACACCAGAGTGAAGGCCAGAAGCTCACATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554633.5
CDS CAA 90 bp CATCATGGGTACCCGCACCACAGTCTCCGAGGTCACGTAGAAGTCTaGCTCTTGGGTGCCTTTGTGGTTGAAGCTTGTCTCCCACTTAGC +
Preference number: 6 (lower is better)
Translates to: HHGYPHHSLRGHVEV*LLGAFVVEACLPLS
Trigger: GCTAAGTGGGAGACAAGCTTCAACCACAAAGGCACCCAAGAGCAAGACTTCTACGTGACCTCGGAGACTGTGGTGCGGGTACCCATGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
ENST00000556730.1
CDS TCA 72 bp GCACTTATAGATGGTTGCCTTCACTCTGTTCGCCCATaGCCTCTTCCCTGTGAGCCCACAGGCACAGTCTGT +
Preference number: 6 (lower is better)
Translates to: ALIDGCLHSVRP*PLPCEPTGTVC
Trigger: ACAGACTGTGCCTGTGGGCTCACAGGGAAGAGGTCATGGGCGAACAGAGTGAAGGCAACCATCTATAAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000553780.5
CDS TCA 72 bp CACCTCTGCTGCCTTGGATACCTGAAACTGCAGAGATaGGACTCCTTCAGAGCTTTGCAGACCCCAAACCCC +
Preference number: 6 (lower is better)
Translates to: HLCCLGYLKLQR*DSFRALQTPNP
Trigger: GGGGTTTGGGGTCTGCAAAGCTCTGAAGGAGTCTCATCTCTGCAGTTTCAGGTATCCAAGGCAGCAGAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553511.1
CDS GCA 72 bp AGGTACAGCGTCTTCATGGCACTTACGAAGGTGTCCTaGAGGTCTACCACCAGGTCGGTGAAAAGGGCATTG +
Preference number: 6 (lower is better)
Translates to: RYSVFMALTKVS*RSTTRSVKRAL
Trigger: CAATGCCCTTTTCACCGACCTGGTGGTAGACCTGCAGGACACCTTCGTAAGTGCCATGAAGACGCTGTACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554220.5
ENST00000554276.1
ENST00000554866.5
ENST00000556730.1
ENST00000556775.5
ENST00000557598.1
CDS TCA 72 bp GGAGGAAGAGCTGCATGGTGGCTGTTCTTTGTTCTATaGGGAAACGGAGGCTCTGCCAGAGTTAGTGTGGAG +
Preference number: 6 (lower is better)
Translates to: GGRAAWWLFFVL*GNGGSARVSVE
Trigger: CTCCACACTAACTCTGGCAGAGCCTCCGTTTCCTCATAGAACAAAGAACAGCCACCATGCAGCTCTTCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000329597.12
ENST00000553511.1
ENST00000554276.1
CDS CCA 72 bp TGGGGAGGACTTTCTCCAGCTGATAGGAGCCCTCAATaGAGAATTTGGGAAGGTAAAGCTCGAGCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: WGGLSPADRSPQ*RIWEGKARAAS
Trigger: AGAGGCAGCTCGAGCTTTACCTTCCCAAATTCTCCATTGAGGGCTCCTATCAGCTGGAGAAAGTCCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS CCA 72 bp ATATTTGAGTGGTTGCTGATGCCGGACAGATCAGCATaGGAGGTGAAGACGTTACTGATCCCCAGACTGGGG +
Preference number: 6 (lower is better)
Translates to: IFEWLLMPDRSA*EVKTLLIPRLG
Trigger: CCCCAGTCTGGGGATCAGTAACGTCTTCACCTCCCATGCTGATCTGTCCGGCATCAGCAACCACTCAAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS CCA 72 bp TTCTTCATGGCTTTGGGGCCCAATTATGTGGAGTTCTaGACGCTGGAAATCCAAGGTCAAGGTGCCGTCAGG +
Preference number: 6 (lower is better)
Translates to: FFMALGPNYVEF*TLEIQGQGAVR
Trigger: CCTGACGGCACCTTGACCTTGGATTTCCAGCGTCCAGAACTCCACATAATTGGGCCCCAAAGCCATGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553780.5
CDS CAA 72 bp TTGATCTGCTTCATGGCCCCTGCAGAGTCCCTAAAGTaGGTAGGGAAAGTGTCTGCCAGGTACAGCGTCTTC +
Preference number: 6 (lower is better)
Translates to: LICFMAPAESLK*VGKVSARYSVF
Trigger: GAAGACGCTGTACCTGGCAGACACTTTCCCTACCAACTTTAGGGACTCTGCAGGGGCCATGAAGCAGATCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
ENST00000556730.1
ENST00000556775.5
CDS CAA 90 bp ACCACAGCTTTGTGCACCATCTCAGACACCTGGATATTTGAGTGGTaGCTGATGCCGGACAGATCAGCATGGGAGGTGAAGACGTTACTG +
Preference number: 6 (lower is better)
Translates to: TTALCTISDTWIFEW*LMPDRSAWEVKTLL
Trigger: CAGTAACGTCTTCACCTCCCATGCTGATCTGTCCGGCATCAGCAACCACTCAAATATCCAGGTGTCTGAGATGGTGCACAAAGCTGTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS TCA 72 bp CACAGCTTTGTGCACCATCTCAGACACCTGGATATTTaGGTGGTTGCTGATGCCGGACAGATCAGCATGGGA +
Preference number: 6 (lower is better)
Translates to: HSFVHHLRHLDI*VVADAGQISMG
Trigger: TCCCATGCTGATCTGTCCGGCATCAGCAACCACTCAAATATCCAGGTGTCTGAGATGGTGCACAAAGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS TCA 72 bp CCGCCTGTATTCTTCATGCTTCGGTTTCCTGATCTATaGGCAAGGACACTGGCCCAAGGAAGCAGTTTGCTC +
Preference number: 6 (lower is better)
Translates to: PPVFFMLRFPDL*ARTLAQGSSLL
Trigger: GAGCAAACTGCTTCCTTGGGCCAGTGTCCTTGCTCATAGATCAGGAAACCGAAGCATGAAGAATACAGGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556064.1
CDS CCA 72 bp CCTCTTCCTTCTTCATGGCTTTGGGGCCCAATTATGTaGAGTTCTGGACGCTGGAAATCCAAGGTCAAGGTG +
Preference number: 6 (lower is better)
Translates to: PLPSSWLWGPIM*SSGRWKSKVKV
Trigger: CACCTTGACCTTGGATTTCCAGCGTCCAGAACTCCACATAATTGGGCCCCAAAGCCATGAAGAAGGAAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000553780.5
CDS TCA 72 bp GGTGGCTGTTCTTTGTTCTCTGCTGCCTTGGATACCTaGAACTGCAGAGATGAGACTCCTTCAGAGCTTTGC +
Preference number: 6 (lower is better)
Translates to: GGCSLFSAALDT*NCRDETPSELC
Trigger: GCAAAGCTCTGAAGGAGTCTCATCTCTGCAGTTTCAGGTATCCAAGGCAGCAGAGAACAAAGAACAGCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555681.1
CDS TCA 72 bp GGAGCTTTCTTAGACTGTTCTGGGGCATTGGCACACTaGGCCTCACCCCTTGGATTCATAATGCACTGGATT +
Preference number: 6 (lower is better)
Translates to: GAFLDCSGALAH*ASPLGFIMHWI
Trigger: AATCCAGTGCATTATGAATCCAAGGGGTGAGGCTCAGTGTGCCAATGCCCCAGAACAGTCTAAGAAAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556730.1
CDS CAA 72 bp ATTTCAGGAGAAGCCCCACCTCAGGGGCGGTTCACTTaGCCAAGGAAGAGGATGTTGTTATCCACAATGAAC +
Preference number: 6 (lower is better)
Translates to: ISGEAPPQGRFT*PRKRMLLSTMN
Trigger: GTTCATTGTGGATAACAACATCCTCTTCCTTGGCAAAGTGAACCGCCCCTGAGGTGGGGCTTCTCCTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
CDS GCA 72 bp CTTTGTTCTTCAGGCATCTGCCGCCTGTATTCTTCATaGTTCGGTTTCCTGATCTATGAGCAAGGACACTGG +
Preference number: 6 (lower is better)
Translates to: LCSSGICRLYSS*FGFLIYEQGHW
Trigger: CCAGTGTCCTTGCTCATAGATCAGGAAACCGAAGCATGAAGAATACAGGCGGCAGATGCCTGAAGAACAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556064.1
CDS GCA 72 bp CTTAAGCAAGTCCACAATCTTGCCCTTCGTTTGCTTTaGCACATAATCATTGATCTGCTTCATGGCCCCTGC +
Preference number: 6 (lower is better)
Translates to: LKQVHNLALRLL*HIIIDLLHGPC
Trigger: GCAGGGGCCATGAAGCAGATCAATGATTATGTGGCAAAGCAAACGAAGGGCAAGATTGTGGACTTGCTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
ENST00000556730.1
ENST00000556775.5
CDS CAA 90 bp ATTGCTATCGAGGTTCTTAAGCAAGTCCACAATCTTGCCCTTCGTTaGCTTTGCCACATAATCATTGATCTGCTTCATGGCCCCTGCAGA +
Preference number: 6 (lower is better)
Translates to: IAIEVLKQVHNLALR*LCHIIIDLLHGPCR
Trigger: TCTGCAGGGGCCATGAAGCAGATCAATGATTATGTGGCAAAGCAAACGAAGGGCAAGATTGTGGACTTGCTTAAGAACCTCGATAGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
ENST00000556730.1
ENST00000556775.5
CDS CAA 90 bp CAGGCAAGATGCCCTTATCTCACGGAAGCCGATAATATTGGATCATaGTTCCTGATTTCTAAAGGCCCAAGACTCCAGGCACAGAAAACA +
Preference number: 6 (lower is better)
Translates to: QARCPYLTEADNIGS*FLISKGPRLQAQKT
Trigger: TGTTTTCTGTGCCTGGAGTCTTGGGCCTTTAGAAATCAGGAACAATGATCCAATATTATCGGCTTCCGTGAGATAAGGGCATCTTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556064.1
CDS CAA 72 bp TGCCCTTATCTCACGGAAGCCGATAATATTGGATCATaGTTCCTGATTTCTAAAGGCCCAAGACTCCAGGCA +
Preference number: 6 (lower is better)
Translates to: CPYLTEADNIGS*FLISKGPRLQA
Trigger: TGCCTGGAGTCTTGGGCCTTTAGAAATCAGGAACAATGATCCAATATTATCGGCTTCCGTGAGATAAGGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556064.1
CDS CAA 72 bp ATTTCAGGGTCTCTCAACCTTGATCCTGTTGACCTTTaGAACAGGATGATGCTTTGTGATCTTGTCCTGGGC +
Preference number: 6 (lower is better)
Translates to: ISGSLNLDPVDL*NRMMLCDLVLG
Trigger: GCCCAGGACAAGATCACAAAGCATCATCCTGTTCAAAAGGTCAACAGGATCAAGGTTGAGAGACCCTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557598.1
CDS CAA 72 bp GAGGTTCTTAAGCAAGTCCACAATCTTGCCCTTCGTTaGCTTTGCCACATAATCATTGATCTGCTTCATGGC +
Preference number: 6 (lower is better)
Translates to: EVLKQVHNLALR*LCHIIIDLLHG
Trigger: GCCATGAAGCAGATCAATGATTATGTGGCAAAGCAAACGAAGGGCAAGATTGTGGACTTGCTTAAGAACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329597.12
ENST00000553780.5
ENST00000554276.1
ENST00000554866.5
ENST00000556730.1
ENST00000556775.5
CDS TCA 72 bp ATCTCACGGAAGCCGATAATATTGGATCATTGTTCCTaGTTTCTAAAGGCCCAAGACTCCAGGCACAGAAAA +
Preference number: 6 (lower is better)
Translates to: ISRKPIILDHCS*FLKAQDSRHRK
Trigger: TTTTCTGTGCCTGGAGTCTTGGGCCTTTAGAAATCAGGAACAATGATCCAATATTATCGGCTTCCGTGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556064.1