RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SERPINA10 (Homo sapiens)

Ensembl gene IDs: ENSG00000140093, ENSG00000278767

Ensembl transcript IDs: ENST00000261994.9, ENST00000393096.5, ENST00000554173.1, ENST00000554723.5, ENST00000614630.4, ENST00000616057.2

Found 719 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTGTTTaGTACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTATGC +
Preference number: 1 (lower is better)
Translates to: GTLSPAIHCWYPVCV*YLRFSIYYSTKCLC
Trigger: GCATAAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR GCA 90 bp CAGCCAATGCCTCTGCCAAGCGATTTGATGCACCATGGAAGCAGATaGTGTGATCAGGACTGGTTAGAGCTATTTTCTTCTGATGTCAGT +
Preference number: 1 (lower is better)
Translates to: QPMPLPSDLMHHGSR*CDQDWLELFSSDVS
Trigger: ACTGACATCAGAAGAAAATAGCTCTAACCAGTCCTGATCACAGCATCTGCTTCCATGGTGCATCAAATCGCTTGGCAGAGGCATTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR TCA 90 bp AGAGTAAAAAGGGCTTGGAGACTAGACTCAGGAAAGGTAGGCTTCTaGCTCTGCCATTGCCACACTGGAAGACCTTGGACAAGTATTTTG +
Preference number: 1 (lower is better)
Translates to: RVKRAWRLDSGKVGF*LCHCHTGRPWTSIL
Trigger: CAAAATACTTGTCCAAGGTCTTCCAGTGTGGCAATGGCAGAGTCAGAAGCCTACCTTTCCTGAGTCTAGTCTCCAAGCCCTTTTTACTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR CCA 90 bp CCAAGCGATTTGATGCACCATGGAAGCAGATGCTGTGATCAGGACTaGTTAGAGCTATTTTCTTCTGATGTCAGTCAGCAAGAAATGACT +
Preference number: 1 (lower is better)
Translates to: PSDLMHHGSRCCDQD*LELFSSDVSQQEMT
Trigger: AGTCATTTCTTGCTGACTGACATCAGAAGAAAATAGCTCTAACCAGTCCTGATCACAGCATCTGCTTCCATGGTGCATCAAATCGCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR TCA 90 bp ATTCCAGAAATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTaGGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCC +
Preference number: 1 (lower is better)
Translates to: IPEINNLKVLSSMPF*VVGWNLALSCSVPP
Trigger: GGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATTTCTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR CCA 90 bp GCCATTGCCACACTGGAAGACCTTGGACAAGTATTTTGTTCCCACTaGTATATAAGGTATGACTTATCCACTAGATGCAGAAGACACAGT +
Preference number: 1 (lower is better)
Translates to: AIATLEDLGQVFCSH*YIRYDLSTRCRRHS
Trigger: ACTGTGTCTTCTGCATCTAGTGGATAAGTCATACCTTATATACCAGTGGGAACAAAATACTTGTCCAAGGTCTTCCAGTGTGGCAATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR-3UTR GCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCAGGAACACTCTCCCCTaGCATCCATTGCTGGTATCC +
Preference number: 2 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPRNTLP*HPLLVS
Trigger: GGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCT...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR-3UTR GCA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTAGGAACACTCTCCCCTaGCATCCATTGCTGGTATCC +
Preference number: 2 (lower is better)
Translates to: DGILHCPALSHPGCEFSPRNTLP*HPLLVS
Trigger: GGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCT...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR CAA 90 bp GGCTTGGAGACTAGACTCAGGAAAGGTAGGCTTCTGACTCTGCCATaGCCACACTGGAAGACCTTGGACAAGTATTTTGTTCCCACTGGT +
Preference number: 2 (lower is better)
Translates to: GLETRLRKGRLLTLP*PHWKTLDKYFVPTG
Trigger: ACCAGTGGGAACAAAATACTTGTCCAAGGTCTTCCAGTGTGGCAATGGCAGAGTCAGAAGCCTACCTTTCCTGAGTCTAGTCTCCAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR-3UTR TCA 90 bp TTTCACCCTGGGACAAAGTTCATGCTTATATTCTGTTTAACCCCCATGGGTAGCGTCCCACCCAGGATGTaGATTCTCCCCTTGCCCAAT +
Preference number: 2 (lower is better)
Translates to: FHPGTKFMLIFCLTPMGSVPPRM*ILPLPN
Trigger: ATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGAC...GCTACCCATGGGGGTTAAACAGAATATAAGCATGAACTTTGTCCCAGGGTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR-3UTR GCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGAGGAACACTCTCCCCTaGCATCCATTGCTGGTATCC +
Preference number: 2 (lower is better)
Translates to: SLKQHAILSSGMESCIVLRNTLP*HPLLVS
Trigger: GGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCT...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR CAA 90 bp AGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTGTTaGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTATG +
Preference number: 2 (lower is better)
Translates to: RNTLPCHPLLVSCVC*IPQIQHLLQHEVLM
Trigger: CATAAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR-3UTR GCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGTCCCCTGCCATCCATTaGTGGTATCCTGTGTGTGTT +
Preference number: 2 (lower is better)
Translates to: SLKQHAILSSGMESCIVLSPAIH*WYPVCV
Trigger: AACACACACAGGATACCAGCAATGGATGGCAGGGGA...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR-3UTR GCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGTGTGAATTCTCCCCTTaGCCAATGTCTCCACACTGT +
Preference number: 2 (lower is better)
Translates to: SLKQHAILSSGMESCIVLCEFSP*PMSPHC
Trigger: ACAGTGTGGAGACATTGGGCAAGGGGAGAATTCACA...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR-3UTR GCA 90 bp TTTCACCCTGGGACAAAGTTCATGCTTATATTCTGTTTAACCCCCATGGGTAGCAGTGGGATGGAATCTTaGATTGTCCTGCTCTGTCCC +
Preference number: 2 (lower is better)
Translates to: FHPGTKFMLIFCLTPMGSSGMES*IVLLCP
Trigger: GGGACAGAGCAGGACAATGCAAGATTCCATCCCACT...GCTACCCATGGGGGTTAAACAGAATATAAGCATGAACTTTGTCCCAGGGTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR-3UTR GCA 90 bp TTTCACCCTGGGACAAAGTTCATGCTTATATTCTGTTTAACCCCCATGGGTAGCATGCAGAAGACACAGTaGCCAAGGCTGACAGTACTG +
Preference number: 2 (lower is better)
Translates to: FHPGTKFMLIFCLTPMGSMQKTQ*PRLTVL
Trigger: CAGTACTGTCAGCCTTGGGCACTGTGTCTTCTGCAT...GCTACCCATGGGGGTTAAACAGAATATAAGCATGAACTTTGTCCCAGGGTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR-3UTR TCA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTGTCCCACCCAGGATGTaGATTCTCCCCTTGCCCAAT +
Preference number: 2 (lower is better)
Translates to: KQSKSLKQHAILSSGMESVPPRM*ILPLPN
Trigger: ATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGAC...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR-3UTR GCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTAAGGAACACTCTCCCCTaGCATCCATTGCTGGTATCC +
Preference number: 2 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVRNTLP*HPLLVS
Trigger: GGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCT...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR-3UTR GCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGTGGTATTGCAGTGCTTaGATTCAAGTAACTCATTTT +
Preference number: 2 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMWYCSA*IQVTHF
Trigger: AAAATGAGTTACTTGAATGCAAGCACTGCAATACCA...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR-3UTR GCA 90 bp AGTGAAGACTTCTACAATGTTAAGATTTCCCCCGCTCGGTTGGAAACCCTGAATTGTGAATTCTCCCCTTaGCCAATGTCTCCACACTGT +
Preference number: 2 (lower is better)
Translates to: SEDFYNVKISPARLETLNCEFSP*PMSPHC
Trigger: ACAGTGTGGAGACATTGGGCAAGGGGAGAATTCACA...ATTCAGGGTTTCCAACCGAGCGGGGGAAATCTTAACATTGTAGAAGTCTTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR-3UTR GCA 90 bp TTAGATGGAAGGAAGAGTAAAAAGGGCTTGGAGACTAGACTCAGGAAAGGTAGGCACCATGGAAGCAGATaGTGTGATCAGGACTGGTTA +
Preference number: 2 (lower is better)
Translates to: LDGRKSKKGLETRLRKGRHHGSR*CDQDWL
Trigger: TAACCAGTCCTGATCACAGCATCTGCTTCCATGGTG...CCTACCTTTCCTGAGTCTAGTCTCCAAGCCCTTTTTACTCTTCCTTCCATCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR-3UTR CCA 90 bp TTAGATGGAAGGAAGAGTAAAAAGGGCTTGGAGACTAGACTCAGGAAAGGTAGGCTGCCATTGCCACACTaGAAGACCTTGGACAAGTAT +
Preference number: 2 (lower is better)
Translates to: LDGRKSKKGLETRLRKGRLPLPH*KTLDKY
Trigger: ATACTTGTCCAAGGTCTTCCAGTGTGGCAATGGCAG...CCTACCTTTCCTGAGTCTAGTCTCCAAGCCCTTTTTACTCTTCCTTCCATCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR-3UTR GCA 90 bp GCCTGTGTACTTGGGAAATCTGAAACTGAGTGTCTTAGGAACTTCTTAAAGCAAGGTAGCTGTAGTGCATaGTGTTTACCTGGTCCCCAT +
Preference number: 2 (lower is better)
Translates to: ACVLGKSETECLRNFLKQGSCSA*CLPGPH
Trigger: ATGGGGACCAGGTAAACAGCATGCACTACAGCTACC...TTGCTTTAAGAAGTTCCTAAGACACTCAGTTTCAGATTTCCCAAGTACACAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR CAA 90 bp CCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATaGCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTA +
Preference number: 2 (lower is better)
Translates to: PKLVKNKRNTLPCHP*LVSCVCLIPQIQHL
Trigger: TAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR-3UTR TCA 90 bp AGTGAAGACTTCTACAATGTTAAGATTTCCCCCGCTCGGTTGGAAACCCTGAATAGAGAGAGAAGCACATaGCTCAAGGAGAATGTTTAC +
Preference number: 2 (lower is better)
Translates to: SEDFYNVKISPARLETLNRERST*LKENVY
Trigger: GTAAACATTCTCCTTGAGTCATGTGCTTCTCTCTCT...ATTCAGGGTTTCCAACCGAGCGGGGGAAATCTTAACATTGTAGAAGTCTTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR-3UTR CCA 90 bp ATGACTTATCCACTAGATGCAGAAGACACAGTGCCCAAGGCTGACAGTACTGTATCCCCCTCAGATAAGTaGGGACTACTGTATTTATTT +
Preference number: 2 (lower is better)
Translates to: MTYPLDAEDTVPKADSTVSPSDK*GLLYLF
Trigger: AAATAAATACAGTAGTCCCCACTTATCTGAGGGGGA...TACAGTACTGTCAGCCTTGGGCACTGTGTCTTCTGCATCTAGTGGATAAGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR-3UTR CCA 90 bp ATGACTTATCCACTAGATGCAGAAGACACAGTGCCCAAGGCTGACAGTACTGTATGCTGTGATCAGGACTaGTTAGAGCTATTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: MTYPLDAEDTVPKADSTVCCDQD*LELFSS
Trigger: AGAAGAAAATAGCTCTAACCAGTCCTGATCACAGCA...TACAGTACTGTCAGCCTTGGGCACTGTGTCTTCTGCATCTAGTGGATAAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR-3UTR CCA 90 bp TTTCACCCTGGGACAAAGTTCATGCTTATATTCTGTTTAACCCCCATGGGTAGCTGCATGCTGTTTACCTaGTCCCCATCAGATGTTTTA +
Preference number: 2 (lower is better)
Translates to: FHPGTKFMLIFCLTPMGSCMLFT*SPSDVL
Trigger: TAAAACATCTGATGGGGACCAGGTAAACAGCATGCA...GCTACCCATGGGGGTTAAACAGAATATAAGCATGAACTTTGTCCCAGGGTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR-3UTR CCA 90 bp AGTGAAGACTTCTACAATGTTAAGATTTCCCCCGCTCGGTTGGAAACCCTGAATTCCCCCTCAGATAAGTaGGGACTACTGTATTTATTT +
Preference number: 2 (lower is better)
Translates to: SEDFYNVKISPARLETLNSPSDK*GLLYLF
Trigger: AAATAAATACAGTAGTCCCCACTTATCTGAGGGGGA...ATTCAGGGTTTCCAACCGAGCGGGGGAAATCTTAACATTGTAGAAGTCTTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR-3UTR TCA 90 bp AGTGAAGACTTCTACAATGTTAAGATTTCCCCCGCTCGGTTGGAAACCCTGAATACATATATATCTTCATaGAGGAAGGAGGAGTCTACA +
Preference number: 2 (lower is better)
Translates to: SEDFYNVKISPARLETLNTYISS*RKEEST
Trigger: TGTAGACTCCTCCTTCCTTCATGAAGATATATATGT...ATTCAGGGTTTCCAACCGAGCGGGGGAAATCTTAACATTGTAGAAGTCTTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR-3UTR GCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGTGGTATTGCAGTGCTTaGATTCAAGTAACTCATTTT +
Preference number: 2 (lower is better)
Translates to: SLKQHAILSSGMESCIVLWYCSA*IQVTHF
Trigger: AAAATGAGTTACTTGAATGCAAGCACTGCAATACCA...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR-3UTR GCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATGTGAATTCTCCCCTTaGCCAATGTCTCCACACTGT +
Preference number: 2 (lower is better)
Translates to: NKQSKSLKQHAILSSGMECEFSP*PMSPHC
Trigger: ACAGTGTGGAGACATTGGGCAAGGGGAGAATTCACA...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR-3UTR CCA 90 bp GCCTGTGTACTTGGGAAATCTGAAACTGAGTGTCTTAGGAACTTCTTAAAGCAATGCATGCTGTTTACCTaGTCCCCATCAGATGTTTTA +
Preference number: 2 (lower is better)
Translates to: ACVLGKSETECLRNFLKQCMLFT*SPSDVL
Trigger: TAAAACATCTGATGGGGACCAGGTAAACAGCATGCA...TTGCTTTAAGAAGTTCCTAAGACACTCAGTTTCAGATTTCCCAAGTACACAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR-3UTR CCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATCCCCCTCAGATAAGTaGGGACTACTGTATTTATTT +
Preference number: 2 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVSPSDK*GLLYLF
Trigger: AAATAAATACAGTAGTCCCCACTTATCTGAGGGGGA...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR-3UTR CCA 90 bp GCCTGTGTACTTGGGAAATCTGAAACTGAGTGTCTTAGGAACTTCTTAAAGCAAAGTGGGAAATTGGACTaGATGCTACTTTATTCCTCT +
Preference number: 2 (lower is better)
Translates to: ACVLGKSETECLRNFLKQSGKLD*MLLYSS
Trigger: AGAGGAATAAAGTAGCATCCAGTCCAATTTCCCACT...TTGCTTTAAGAAGTTCCTAAGACACTCAGTTTCAGATTTCCCAAGTACACAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR-3UTR CCA 90 bp GCCTGTGTACTTGGGAAATCTGAAACTGAGTGTCTTAGGAACTTCTTAAAGCAACATCAGTCCAGGTTATaGAATGATGAAAAGTCAGTA +
Preference number: 2 (lower is better)
Translates to: ACVLGKSETECLRNFLKQHQSRL*NDEKSV
Trigger: TACTGACTTTTCATCATTCCATAACCTGGACTGATG...TTGCTTTAAGAAGTTCCTAAGACACTCAGTTTCAGATTTCCCAAGTACACAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR-3UTR CCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCCCCCTCAGATAAGTaGGGACTACTGTATTTATTT +
Preference number: 2 (lower is better)
Translates to: NKQSKSLKQHAILSSGMESPSDK*GLLYLF
Trigger: AAATAAATACAGTAGTCCCCACTTATCTGAGGGGGA...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR-3UTR GCA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGGTATTGCAGTGCTTaGATTCAAGTAACTCATTTT +
Preference number: 2 (lower is better)
Translates to: KQSKSLKQHAILSSGMESWYCSA*IQVTHF
Trigger: AAAATGAGTTACTTGAATGCAAGCACTGCAATACCA...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR GCA 72 bp CCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTaGCCAATGTCTCCACACTGTCTATGCTCCTCGCCC +
Preference number: 3 (lower is better)
Translates to: PALSHPGCEFSP*PMSPHCLCSSP
Trigger: GGGCGAGGAGCATAGACAGTGTGGAGACATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR TCA 72 bp AATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTaGATTCTCCCCTTGCCCAATGTCTCCACACTGTCT +
Preference number: 3 (lower is better)
Translates to: NLALSCSVPPRM*ILPLPNVSTLS
Trigger: AGACAGTGTGGAGACATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR-3UTR CAA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATATCTGCTGGGGGTCTTaGAATGTATCCCCCTCAGAT +
Preference number: 3 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNICWGS*NVSPSD
Trigger: ATCTGAGGGGGATACATTCAAAGACCCCCAGCAGAT...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR GCA 72 bp AAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTaGATTGTCCTGCTCTGTCCCACCCAGGATGTGAAT +
Preference number: 3 (lower is better)
Translates to: KQHAILSSGMES*IVLLCPTQDVN
Trigger: ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR-3UTR CAA 90 bp TTAGATGGAAGGAAGAGTAAAAAGGGCTTGGAGACTAGACTCAGGAAAGGTAGGGGATGGAATCTTGCATaGTCCTGCTCTGTCCCACCC +
Preference number: 3 (lower is better)
Translates to: LDGRKSKKGLETRLRKGRGWNLA*SCSVPP
Trigger: GGGTGGGACAGAGCAGGACAATGCAAGATTCCATCC...CCTACCTTTCCTGAGTCTAGTCTCCAAGCCCTTTTTACTCTTCCTTCCATCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR TCA 72 bp TCCCCTGCCATCCATTGCTGGTATCCTGTGTGTGTTTaGTACCTCAGATTCAGCATCTACTACAGCACGAAG +
Preference number: 3 (lower is better)
Translates to: SPAIHCWYPVCV*YLRFSIYYSTK
Trigger: CTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGCAATGGATGGCAGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR CCA 72 bp AGGAAAGGTAGGCTTCTGACTCTGCCATTGCCACACTaGAAGACCTTGGACAAGTATTTTGTTCCCACTGGT +
Preference number: 3 (lower is better)
Translates to: RKGRLLTLPLPH*KTLDKYFVPTG
Trigger: ACCAGTGGGAACAAAATACTTGTCCAAGGTCTTCCAGTGTGGCAATGGCAGAGTCAGAAGCCTACCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR-3UTR CAA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTGTATCCTGTGTGTGTTaGATACCTCAGATTCAGCAT +
Preference number: 3 (lower is better)
Translates to: DGILHCPALSHPGCEFSPVSCVC*IPQIQH
Trigger: ATGCTGAATCTGAGGTATCAAACACACACAGGATAC...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR-3UTR CAA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGCTCCCCTGCCATCCATaGCTGGTATCCTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQLPCHP*LVSCVC
Trigger: ACACACACAGGATACCAGCAATGGATGGCAGGGGAG...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR-3UTR CAA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTAATCTGCTGGGGGTCTTaGAATGTATCCCCCTCAGAT +
Preference number: 3 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVICWGS*NVSPSD
Trigger: ATCTGAGGGGGATACATTCAAAGACCCCCAGCAGAT...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR CCA 72 bp TTGATGCACCATGGAAGCAGATGCTGTGATCAGGACTaGTTAGAGCTATTTTCTTCTGATGTCAGTCAGCAA +
Preference number: 3 (lower is better)
Translates to: LMHHGSRCCDQD*LELFSSDVSQQ
Trigger: TTGCTGACTGACATCAGAAGAAAATAGCTCTAACCAGTCCTGATCACAGCATCTGCTTCCATGGTGCATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR-3UTR CAA 90 bp TTTCACCCTGGGACAAAGTTCATGCTTATATTCTGTTTAACCCCCATGGGTAGCGTATCCTGTGTGTGTTaGATACCTCAGATTCAGCAT +
Preference number: 3 (lower is better)
Translates to: FHPGTKFMLIFCLTPMGSVSCVC*IPQIQH
Trigger: ATGCTGAATCTGAGGTATCAAACACACACAGGATAC...GCTACCCATGGGGGTTAAACAGAATATAAGCATGAACTTTGTCCCAGGGTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR GCA 72 bp CCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTaGCATCCATTGCTGGTATCCTGTGTGTGTTTGATA +
Preference number: 3 (lower is better)
Translates to: PKLVKNKRNTLP*HPLLVSCVCLI
Trigger: TATCAAACACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR-3UTR CAA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTAGTATCCTGTGTGTGTTaGATACCTCAGATTCAGCAT +
Preference number: 3 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVVSCVC*IPQIQH
Trigger: ATGCTGAATCTGAGGTATCAAACACACACAGGATAC...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR TCA 72 bp ATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTaGGTAGTGGGATGGAATCTTGCATTGTCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: INNLKVLSSMPF*VVGWNLALSCS
Trigger: AGAGCAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR TCA 72 bp TTCTACCAATGCAGCCATAGAACATATATATCTTCATaGAGGAAGGAGGAGTCTACAAGGTTAAACGTGCCT +
Preference number: 3 (lower is better)
Translates to: FYQCSHRTYISS*RKEESTRLNVP
Trigger: AGGCACGTTTAACCTTGTAGACTCCTCCTTCCTTCATGAAGATATATATGTTCTATGGCTGCATTGGTAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR CCA 72 bp ACACTGGAAGACCTTGGACAAGTATTTTGTTCCCACTaGTATATAAGGTATGACTTATCCACTAGATGCAGA +
Preference number: 3 (lower is better)
Translates to: TLEDLGQVFCSH*YIRYDLSTRCR
Trigger: TCTGCATCTAGTGGATAAGTCATACCTTATATACCAGTGGGAACAAAATACTTGTCCAAGGTCTTCCAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR-3UTR CAA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGGTATCCTGTGTGTGTTaGATACCTCAGATTCAGCAT +
Preference number: 3 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQVSCVC*IPQIQH
Trigger: ATGCTGAATCTGAGGTATCAAACACACACAGGATAC...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
3UTR CCA 72 bp GAAGATCAGGGATATTTACGATTTTCCTTTTCACCCTaGGACAAAGTTCATGCTTATATTCTGTTTAACCCC +
Preference number: 3 (lower is better)
Translates to: EDQGYLRFSFSP*DKVHAYILFNP
Trigger: GGGGTTAAACAGAATATAAGCATGAACTTTGTCCCAGGGTGAAAAGGAAAATCGTAAATATCCCTGATCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR GCA 72 bp TTAGCCTTACAAGCTAACTGTAGAGCTCACTTTTACTaGAGAAATGGAGATAGGTCTATAAAGGATTTTACT +
Preference number: 3 (lower is better)
Translates to: LALQANCRAHFY*RNGDRSIKDFT
Trigger: AGTAAAATCCTTTATAGACCTATCTCCATTTCTGCAGTAAAAGTGAGCTCTACAGTTAGCTTGTAAGGCTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR TCA 72 bp GAATGTTTACATGTGTTCCTCCCAAAGGCTTTATCTTaGCATAGTGTTCTCATCTGCAACTTTTTAAAAATG +
Preference number: 3 (lower is better)
Translates to: ECLHVFLPKALS*HSVLICNFLKM
Trigger: CATTTTTAAAAAGTTGCAGATGAGAACACTATGTCAAGATAAAGCCTTTGGGAGGAACACATGTAAACATTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGGCAGGAGCCCGGGCTTaGTGGGCTTCAGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMAGARA*WASGPA
Trigger: TGCAGGCCCTGAAGCCCACCAAGCCCGGGCTCCTGC...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGCTGGCGACTGAGGACTaGGGGCCAAGCCGGGTACCA +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMLATED*GPSRVP
Trigger: TGGTACCCGGCTTGGCCCCCAGTCCTCAGTCGCCAG...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGGGAGCCCGGGCTTGGTaGGCTTCAGGGCCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMGARAW*ASGPAS
Trigger: ACTTGCAGGCCCTGAAGCCCACCAAGCCCGGGCTCC...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCGGCACCACCTTCATGTaGTCGGCTGCGGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPGTTFM*SAAEAK
Trigger: CTTGGCCTCCGCAGCCGATCACATGAAGGTGGTGCC...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCCTGGTTCTGAGGGGCTaGGGTCTCTGGCGACTGAGG +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPLVLRG*GLWRLR
Trigger: CCTCAGTCGCCAGAGACCCCAGCCCCTCAGAACCAG...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCAGCTACTCGGGAGGCTaGGGCAGGAGAATGGCACGA +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPSYSGG*GRRMAR
Trigger: TCGTGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCT...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGGCGGAGGCCAAGGAGTaGCTCCCTTCAGCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMAEAKE*LPSAAR
Trigger: TCTTGCAGCTGAAGGGAGGCACTCCTTGGCCTCCGC...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCTACCAGCCACACCTGTaGCAGGAGGACGGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPYQPHL*QEDGEQ
Trigger: CTGCTCTCCGTCCTCCTGGCACAGGTGTGGCTGGTA...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCTCCTCCTTGGGAGCCTaGACTACCCTGCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPSSLGA*TTLLVW
Trigger: CCAGACCAGCAGGGTAGTGCAGGCTCCCAAGGAGGA...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGTCCTCCTTGGGAGCCTaGACTACCCTGCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMSSLGA*TTLLVW
Trigger: CCAGACCAGCAGGGTAGTGCAGGCTCCCAAGGAGGA...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGCCTTGGCCTCCTTCCTaGAGAGGAGCCCCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMPWPPS*RGAPCV
Trigger: GACACAAGGGGCTCCTCTGCAGGAAGGAGGCCAAGG...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGCCTGCACTACCCTGCTaGTCTGGTTCTGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMPALPC*SGSEGL
Trigger: CAGCCCCTCAGAACCAGACCAGCAGGGTAGTGCAGG...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGTTTCAGTCGGCCCTGTaGCCCCCAGCATCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMFQSAL*PPASSL
Trigger: CAGGCTTGATGCTGGGGGCCACAGGGCCGACTGAAA...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCTTTCAGTCGGCCCTGTaGCCCCCAGCATCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPFQSAL*PPASSL
Trigger: CAGGCTTGATGCTGGGGGCCACAGGGCCGACTGAAA...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGGCCACTTCTCAGCCCTaGGACAGCACACATCCCTGC +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMATSQP*DSTHPC
Trigger: GCAGGGATGTGTGCTGTCCCAGGGCTGAGAAGTGGC...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGCTCAGGGGGTGCTCCTaGACTAGGACACCATCCAGC +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMLRGCS*TRTPSS
Trigger: GCTGGATGGTGTCCTAGTCCAGGAGCACCCCCTGAG...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR TCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGAGTGGAGCCCTCTCTTaGTCTGGGTTTCAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMSGALS*SGFQSA
Trigger: GGCCGACTGAAACCCAGATCAAGAGAGGGCTCCACT...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTGCGGAGGCCAAGGAGTaGCTCCCTTCAGCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: DGILHCPALSHPGCEFSPAEAKE*LPSAAR
Trigger: TCTTGCAGCTGAAGGGAGGCACTCCTTGGCCTCCGC...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCCTTCATGTGATCGGCTaGGGAGGCCAAGGAGTGCCT +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPLHVIG*GGQGVP
Trigger: AGGCACTCCTTGGCCTCCGCAGCCGATCACATGAAG...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTCCTCCTTGGGAGCCTaGACTACCCTGCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: DGILHCPALSHPGCEFSPSSLGA*TTLLVW
Trigger: CCAGACCAGCAGGGTAGTGCAGGCTCCCAAGGAGGA...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGTCCTCGCTGGCCTCCTaGTCATCTTCCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMSSLAS*SSSSSS
Trigger: GGAGGAAGAGGAAGATGAGCAGGAGGCCAGCGAGGA...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTCCTTGGCAAGCTGCTaGCTGCTGGCCATCAGCCAG +
Preference number: 4 (lower is better)
Translates to: DGILHCPALSHPGCEFSPSLASC*LLAISQ
Trigger: CTGGCTGATGGCCAGCAGGCAGCAGCTTGCCAAGGA...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TTGGAGACTAGACTCAGGAAAGGTAGGCTTCTGACTCTGCCATTGCCACACTGGGTCTCCTTGGCAAGCTaGTGCCTGCTGGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: LETRLRKGRLLTLPLPHWVSLAS*CLLAIS
Trigger: GCTGATGGCCAGCAGGCAGCAGCTTGCCAAGGAGAC...CCAGTGTGGCAATGGCAGAGTCAGAAGCCTACCTTTCCTGAGTCTAGTCTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATGACAGCACACATCCCTaGCTCCCCTCAGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNDSTHP*LPSALG
Trigger: TCCCAGGGCTGAGGGGAGGCAGGGATGTGTGCTGTC...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTCCTGCACTACCCTGCTaGTCTGGTTCTGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: DGILHCPALSHPGCEFSPPALPC*SGSEGL
Trigger: CAGCCCCTCAGAACCAGACCAGCAGGGTAGTGCAGG...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGCTTCCTCTTCCTCCTTaGGAGCCTGCACTACCCTGC +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMLPLPP*EPALPC
Trigger: GCAGGGTAGTGCAGGCTCCCAAGGAGGAAGAGGAAG...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCCTTCCTCTTCCTCCTTaGGAGCCTGCACTACCCTGC +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPLPLPP*EPALPC
Trigger: GCAGGGTAGTGCAGGCTCCCAAGGAGGAAGAGGAAG...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCCAAGCTGCTGCCTGCTaGCCATCAGCCAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPQAAAC*PSARLS
Trigger: AGAAAGCCTGGCTGATGGCCAGCAGGCAGCAGCTTG...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTGGAGACTAGACTCAGGAAAGGTAGGCTTCTGACTCTGCCATTGCCACACTGGTTTCAGTCGGCCCTGTaGCCCCCAGCATCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: LETRLRKGRLLTLPLPHWFQSAL*PPASSL
Trigger: CAGGCTTGATGCTGGGGGCCACAGGGCCGACTGAAA...CCAGTGTGGCAATGGCAGAGTCAGAAGCCTACCTTTCCTGAGTCTAGTCTCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGGCAGGAGCCCGGGCTTaGTGGGCTTCAGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLAGARA*WASGPA
Trigger: TGCAGGCCCTGAAGCCCACCAAGCCCGGGCTCCTGC...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATGCGGAGGCCAAGGAGTaGCTCCCTTCAGCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNAEAKE*LPSAAR
Trigger: TCTTGCAGCTGAAGGGAGGCACTCCTTGGCCTCCGC...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTCTTCATGTGATCGGCTaGGGAGGCCAAGGAGTGCCT +
Preference number: 4 (lower is better)
Translates to: DGILHCPALSHPGCEFSPLHVIG*GGQGVP
Trigger: AGGCACTCCTTGGCCTCCGCAGCCGATCACATGAAG...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCCTCCTTGGGAGCCTaGACTACCCTGCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNSSLGA*TTLLVW
Trigger: CCAGACCAGCAGGGTAGTGCAGGCTCCCAAGGAGGA...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCCTTGGCAAGCTGCTaGCTGCTGGCCATCAGCCAG +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNSLASC*LLAISQ
Trigger: CTGGCTGATGGCCAGCAGGCAGCAGCTTGCCAAGGA...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGCTGGCGACTGAGGACTaGGGGCCAAGCCGGGTACCA +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLLATED*GPSRVP
Trigger: TGGTACCCGGCTTGGCCCCCAGTCCTCAGTCGCCAG...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGGCCTTCTCCTCGCTaGCCTCCTGCTCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: DGILHCPALSHPGCEFSPWPSPR*PPAHLP
Trigger: AGGAAGATGAGCAGGAGGCCAGCGAGGAGAAGGCCA...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCAGCCCTCTCTTGATCTaGGTTTCAGTCGGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPSPLLI*VSVGPV
Trigger: CACAGGGCCGACTGAAACCCAGATCAAGAGAGGGCT...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTGCAGGAGCCCGGGCTTaGTGGGCTTCAGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLAGARA*WASGPA
Trigger: TGCAGGCCCTGAAGCCCACCAAGCCCGGGCTCCTGC...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGCAGGAGCCCGGGCTTaGTGGGCTTCAGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHEAGARA*WASGPA
Trigger: TGCAGGCCCTGAAGCCCACCAAGCCCGGGCTCCTGC...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCGGACCACCAGCATGGTaGCATTTCCTTGGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPGPPAW*HFLGRA
Trigger: TGCCCTACCAAGGAAATGCCACCATGCTGGTGGTCC...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATGCCACTTCTCAGCCCTaGGACAGCACACATCCCTGC +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNATSQP*DSTHPC
Trigger: GCAGGGATGTGTGCTGTCCCAGGGCTGAGAAGTGGC...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR TCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATCACCATCCAGCATGGTaGGGACGCACCTTCCTAGAC +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNHHPAW*GRTFLD
Trigger: GTCTAGGAAGGTGCGTCCTCACCATGCTGGATGGTG...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR GCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATCTTCATGTGATCGGCTaGGGAGGCCAAGGAGTGCCT +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNLHVIG*GGQGVP
Trigger: AGGCACTCCTTGGCCTCCGCAGCCGATCACATGAAG...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGAGGAACACTCTCCCCTaGCATCCATTGCTGGTATCC +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMRNTLP*HPLLVS
Trigger: GGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCT...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAGACAGCACACATCCCTaGCTCCCCTCAGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARDSTHP*LPSALG
Trigger: TCCCAGGGCTGAGGGGAGGCAGGGATGTGTGCTGTC...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR GCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGACAGCACACATCCCTaGCTCCCCTCAGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLDSTHP*LPSALG
Trigger: TCCCAGGGCTGAGGGGAGGCAGGGATGTGTGCTGTC...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR GCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGGTGCCTCCCTTCAGCTaGAAGACTTCCTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMVPPFS*KTSFLF
Trigger: GAACAGGAAGGAAGTCTTGCAGCTGAAGGGAGGCAC...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAACTGGCGACTGAGGACTaGGGGCCAAGCCGGGTACCA +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHELATED*GPSRVP
Trigger: TGGTACCCGGCTTGGCCCCCAGTCCTCAGTCGCCAG...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTCTGGCGACTGAGGACTaGGGGCCAAGCCGGGTACCA +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLLATED*GPSRVP
Trigger: TGGTACCCGGCTTGGCCCCCAGTCCTCAGTCGCCAG...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGCTGGTTCTGAGGGGCTaGGGTCTCTGGCGACTGAGG +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLLVLRG*GLWRLR
Trigger: CCTCAGTCGCCAGAGACCCCAGCCCCTCAGAACCAG...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGACTGGTTCTGAGGGGCTaGGGTCTCTGGCGACTGAGG +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARLVLRG*GLWRLR
Trigger: CCTCAGTCGCCAGAGACCCCAGCCCCTCAGAACCAG...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATCTTCCTCTTCCTCCTTaGGAGCCTGCACTACCCTGC +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNLPLPP*EPALPC
Trigger: GCAGGGTAGTGCAGGCTCCCAAGGAGGAAGAGGAAG...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATCAAGCTGCTGCCTGCTaGCCATCAGCCAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNQAAAC*PSARLS
Trigger: AGAAAGCCTGGCTGATGGCCAGCAGGCAGCAGCTTG...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCATCGTGCCTCATaGAGATCTTTCGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: DGILHCPALSHPGCEFSPCHRAS*RSFAAG
Trigger: GCCTGCTGCGAAAGATCTCCATGAGGCACGATGGCA...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTGGAGCCCGGGCTTGGTaGGCTTCAGGGCCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLGARAW*ASGPAS
Trigger: ACTTGCAGGCCCTGAAGCCCACCAAGCCCGGGCTCC...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGGAGCCCGGGCTTGGTaGGCTTCAGGGCCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHEGARAW*ASGPAS
Trigger: ACTTGCAGGCCCTGAAGCCCACCAAGCCCGGGCTCC...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTGGAGACTAGACTCAGGAAAGGTAGGCTTCTGACTCTGCCATTGCCACACTGGGGACCACCAGCATGGTaGCATTTCCTTGGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: LETRLRKGRLLTLPLPHWGPPAW*HFLGRA
Trigger: TGCCCTACCAAGGAAATGCCACCATGCTGGTGGTCC...CCAGTGTGGCAATGGCAGAGTCAGAAGCCTACCTTTCCTGAGTCTAGTCTCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTGGACCACCAGCATGGTaGCATTTCCTTGGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: DGILHCPALSHPGCEFSPGPPAW*HFLGRA
Trigger: TGCCCTACCAAGGAAATGCCACCATGCTGGTGGTCC...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTGCTGAGGCAGGAGAATaGCACGAACCCGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LRTKGTLSPAIHCWYPVCAEAGE*HEPGRW
Trigger: CCACCTCCCGGGTTCGTGCCATTCTCCTGCCTCAGC...ACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGGCCTCCCCTCAGCCCTaGGAAGGGGAGACCTGCTTA +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLASPQP*EGETCL
Trigger: TAAGCAGGTCTCCCCTTCCCAGGGCTGAGGGGAGGC...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGATCTACCCAACCCTTTaGAGTCTAGGCCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMIYPTL*SLGQEL
Trigger: GAGCTCCTGGCCTAGACTCCAAAGGGTTGGGTAGAT...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR TCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGGCACCACCTTCATGTaGTCGGCTGCGGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHEGTTFM*SAAEAK
Trigger: CTTGGCCTCCGCAGCCGATCACATGAAGGTGGTGCC...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TTTCACCCTGGGACAAAGTTCATGCTTATATTCTGTTTAACCCCCATGGGTAGCGGCACCACCTTCATGTaGTCGGCTGCGGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: FHPGTKFMLIFCLTPMGSGTTFM*SAAEAK
Trigger: CTTGGCCTCCGCAGCCGATCACATGAAGGTGGTGCC...GCTACCCATGGGGGTTAAACAGAATATAAGCATGAACTTTGTCCCAGGGTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATGTCCCACCCAGGATGTaGATTCTCCCCTTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNVPPRM*ILPLPN
Trigger: ATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGAC...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGTGGAAGCAGATGCTGTaGTCAGGACTGGTTAGAGCT +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMWKQML*SGLVRA
Trigger: AGCTCTAACCAGTCCTGATCACAGCATCTGCTTCCA...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCGTGAGAACGTGTGGTTaGGTGTGTCTGTGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPVRTCG*VCLCRN
Trigger: GTTCCTACACAGACACACTCAACCACACGTTCTCAC...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp TTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTTACCAGCCACACCTGTaGCAGGAGGACGGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LRTKGTLSPAIHCWYPVCYQPHL*QEDGEQ
Trigger: CTGCTCTCCGTCCTCCTGGCACAGGTGTGGCTGGTA...ACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAGAGCCTGCACTACCCTaGTGGTCTGGTTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTAREPALP*WSGSEG
Trigger: CCCCTCAGAACCAGACCAGCAGGGTAGTGCAGGCTC...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGGAGCCTGCACTACCCTaGTGGTCTGGTTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLEPALP*WSGSEG
Trigger: CCCCTCAGAACCAGACCAGCAGGGTAGTGCAGGCTC...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTGAGCCTGCACTACCCTaGTGGTCTGGTTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: LRTKGTLSPAIHCWYPVCEPALP*WSGSEG
Trigger: CCCCTCAGAACCAGACCAGCAGGGTAGTGCAGGCTC...ACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGATGGCAAGCTGCTGCCTaGTGGCCATCAGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARWQAAA*WPSARL
Trigger: AAGCCTGGCTGATGGCCAGCAGGCAGCAGCTTGCCA...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTTGGCAAGCTGCTGCCTaGTGGCCATCAGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LRTKGTLSPAIHCWYPVCWQAAA*WPSARL
Trigger: AAGCCTGGCTGATGGCCAGCAGGCAGCAGCTTGCCA...ACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGATCCTTGGCAAGCTGCTaGCTGCTGGCCATCAGCCAG +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARSLASC*LLAISQ
Trigger: CTGGCTGATGGCCAGCAGGCAGCAGCTTGCCAAGGA...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAGTCTCCTTGGCAAGCTaGTGCCTGCTGGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARVSLAS*CLLAIS
Trigger: GCTGATGGCCAGCAGGCAGCAGCTTGCCAAGGAGAC...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATGGAGGCAAACTTGCCTaGACCGTACATCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNGGKLA*TVHHGH
Trigger: GTGCCCATGATGTACGGTGCAGGCAAGTTTGCCTCC...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCCTGCCACTGCCTCAGTaGCCCTTTCATCAACTTCAA +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPLPLPQ*PFHQLQ
Trigger: TTGAAGTTGATGAAAGGGGCACTGAGGCAGTGGCAG...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCTCGGATTCACCACCCTaGCCAGAAACAGAAGCATTC +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPSDSPP*PETEAF
Trigger: GAATGCTTCTGTTTCTGGGCAGGGTGGTGAATCCGA...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGAGTGGGATGGAATCTTaGATTGTCCTGCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMSGMES*IVLLCP
Trigger: GGGACAGAGCAGGACAATGCAAGATTCCATCCCACT...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTCCTTGGCCTCCTTCCTaGAGAGGAGCCCCTTGTGTC +
Preference number: 4 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCPWPPS*RGAPCV
Trigger: GACACAAGGGGCTCCTCTGCAGGAAGGAGGCCAAGG...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp TTGGAGACTAGACTCAGGAAAGGTAGGCTTCTGACTCTGCCATTGCCACACTGGTCCAGTGTGTGGCCTTaGGTCCTGGAAAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: LETRLRKGRLLTLPLPHWSSVWP*VLEKSF
Trigger: GAAGGACTTTTCCAGGACCCAAGGCCACACACTGGA...CCAGTGTGGCAATGGCAGAGTCAGAAGCCTACCTTTCCTGAGTCTAGTCTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAACTGGTTCTGAGGGGCTaGGGTCTCTGGCGACTGAGG +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHELVLRG*GLWRLR
Trigger: CCTCAGTCGCCAGAGACCCCAGCCCCTCAGAACCAG...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp ATGACTTATCCACTAGATGCAGAAGACACAGTGCCCAAGGCTGACAGTACTGTACCTGCACTACCCTGCTaGTCTGGTTCTGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: MTYPLDAEDTVPKADSTVPALPC*SGSEGL
Trigger: CAGCCCCTCAGAACCAGACCAGCAGGGTAGTGCAGG...TACAGTACTGTCAGCCTTGGGCACTGTGTCTTCTGCATCTAGTGGATAAGTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp TTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTCCTGCACTACCCTGCTaGTCTGGTTCTGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LRTKGTLSPAIHCWYPVCPALPC*SGSEGL
Trigger: CAGCCCCTCAGAACCAGACCAGCAGGGTAGTGCAGG...ACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGGCATCAAGCCTGTCATaGCCAAGGACATGCCAAATG +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMASSLS*PRTCQM
Trigger: CATTTGGCATGTCCTTGGCCATGACAGGCTTGATGC...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCGCATCAAGCCTGTCATaGCCAAGGACATGCCAAATG +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPASSLS*PRTCQM
Trigger: CATTTGGCATGTCCTTGGCCATGACAGGCTTGATGC...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTTTTCAGTCGGCCCTGTaGCCCCCAGCATCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: LRTKGTLSPAIHCWYPVCFQSAL*PPASSL
Trigger: CAGGCTTGATGCTGGGGGCCACAGGGCCGACTGAAA...ACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTTTTCAGTCGGCCCTGTaGCCCCCAGCATCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCFQSAL*PPASSL
Trigger: CAGGCTTGATGCTGGGGGCCACAGGGCCGACTGAAA...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGTTTCAGTCGGCCCTGTaGCCCCCAGCATCAAGCCTG +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLFQSAL*PPASSL
Trigger: CAGGCTTGATGCTGGGGGCCACAGGGCCGACTGAAA...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCTCTCCACCAAGTCTGTaGTCAGGTAGTCTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPSPPSL*SGSLQG
Trigger: CCCTTGAAGACTACCTGACCACAGACTTGGTGGAGA...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTTCACCCTGGGACAAAGTTCATGCTTATATTCTGTTTAACCCCCATGGGTAGCGCTGAGGCAGGAGAATaGCACGAACCCGGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: FHPGTKFMLIFCLTPMGSAEAGE*HEPGRW
Trigger: CCACCTCCCGGGTTCGTGCCATTCTCCTGCCTCAGC...GCTACCCATGGGGGTTAAACAGAATATAAGCATGAACTTTGTCCCAGGGTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGCTCAGGGGGTGCTCCTaGACTAGGACACCATCCAGC +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLLRGCS*TRTPSS
Trigger: GCTGGATGGTGTCCTAGTCCAGGAGCACCCCCTGAG...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTATCTACCCAACCCTTTaGAGTCTAGGCCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: DGILHCPALSHPGCEFSPIYPTL*SLGQEL
Trigger: GAGCTCCTGGCCTAGACTCCAAAGGGTTGGGTAGAT...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR TCA 90 bp TTGGAGACTAGACTCAGGAAAGGTAGGCTTCTGACTCTGCCATTGCCACACTGGGCTGAATCCGAAGTTTaGAGTCTCCTTGGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: LETRLRKGRLLTLPLPHWAESEV*SLLGKL
Trigger: CAGCTTGCCAAGGAGACTTCAAACTTCGGATTCAGC...CCAGTGTGGCAATGGCAGAGTCAGAAGCCTACCTTTCCTGAGTCTAGTCTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGTCTTTCGCAGCAGGCTaGATCCGAAGTTTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMSFAAG*IRSLKS
Trigger: AGACTTCAAACTTCGGATTCAGCCTGCTGCGAAAGA...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCTCTTTCGCAGCAGGCTaGATCCGAAGTTTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPSFAAG*IRSLKS
Trigger: AGACTTCAAACTTCGGATTCAGCCTGCTGCGAAAGA...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGGAGCCCTCTCTTaGTCTGGGTTTCAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARSGALS*SGFQSA
Trigger: GGCCGACTGAAACCCAGATCAAGAGAGGGCTCCACT...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGAGTGGAGCCCTCTCTTaGTCTGGGTTTCAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLSGALS*SGFQSA
Trigger: GGCCGACTGAAACCCAGATCAAGAGAGGGCTCCACT...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGGAAGCAGATGCTGTaGTCAGGACTGGTTAGAGCT +
Preference number: 4 (lower is better)
Translates to: DGILHCPALSHPGCEFSPWKQML*SGLVRA
Trigger: AGCTCTAACCAGTCCTGATCACAGCATCTGCTTCCA...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAAGCTACTCGGGAGGCTaGGGCAGGAGAATGGCACGA +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHESYSGG*GRRMAR
Trigger: TCGTGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCT...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGGTGAGTGGTGGTGGGTaGAATATCAAGCCTTTCAAG +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMVSGGG*NIKPFK
Trigger: CTTGAAAGGCTTGATATTTCACCCACCACCACTCAC...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR TCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGCACCATCCAGCATGGTaGGGACGCACCTTCCTAGAC +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLHHPAW*GRTFLD
Trigger: GTCTAGGAAGGTGCGTCCTCACCATGCTGGATGGTG...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR GCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAATACCAGCCACACCTGTaGCAGGAGGACGGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHEYQPHL*QEDGEQ
Trigger: CTGCTCTCCGTCCTCCTGGCACAGGTGTGGCTGGTA...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTTACCAGCCACACCTGTaGCAGGAGGACGGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLYQPHL*QEDGEQ
Trigger: CTGCTCTCCGTCCTCCTGGCACAGGTGTGGCTGGTA...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTGAGCCTGCACTACCCTaGTGGTCTGGTTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLEPALP*WSGSEG
Trigger: CCCCTCAGAACCAGACCAGCAGGGTAGTGCAGGCTC...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TTTCACCCTGGGACAAAGTTCATGCTTATATTCTGTTTAACCCCCATGGGTAGCTCCTCCTTGGGAGCCTaGACTACCCTGCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: FHPGTKFMLIFCLTPMGSSSLGA*TTLLVW
Trigger: CCAGACCAGCAGGGTAGTGCAGGCTCCCAAGGAGGA...GCTACCCATGGGGGTTAAACAGAATATAAGCATGAACTTTGTCCCAGGGTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTTCCTCCTTGGGAGCCTaGACTACCCTGCTGGTCTGG +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLSSLGA*TTLLVW
Trigger: CCAGACCAGCAGGGTAGTGCAGGCTCCCAAGGAGGA...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTTCCTCGCTGGCCTCCTaGTCATCTTCCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCSSLAS*SSSSSS
Trigger: GGAGGAAGAGGAAGATGAGCAGGAGGCCAGCGAGGA...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TTAGATGGAAGGAAGAGTAAAAAGGGCTTGGAGACTAGACTCAGGAAAGGTAGGTGGCAAGCTGCTGCCTaGTGGCCATCAGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LDGRKSKKGLETRLRKGRWQAAA*WPSARL
Trigger: AAGCCTGGCTGATGGCCAGCAGGCAGCAGCTTGCCA...CCTACCTTTCCTGAGTCTAGTCTCCAAGCCCTTTTTACTCTTCCTTCCATCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp TTAGATGGAAGGAAGAGTAAAAAGGGCTTGGAGACTAGACTCAGGAAAGGTAGGTCCTTGGCAAGCTGCTaGCTGCTGGCCATCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LDGRKSKKGLETRLRKGRSLASC*LLAISQ
Trigger: CTGGCTGATGGCCAGCAGGCAGCAGCTTGCCAAGGA...CCTACCTTTCCTGAGTCTAGTCTCCAAGCCCTTTTTACTCTTCCTTCCATCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTCTCCTTGGCAAGCTaGTGCCTGCTGGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHEVSLAS*CLLAIS
Trigger: GCTGATGGCCAGCAGGCAGCAGCTTGCCAAGGAGAC...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTACCATGTTGCCATCGTaGCTCATGGAGATCTTTCGC +
Preference number: 4 (lower is better)
Translates to: DGILHCPALSHPGCEFSPTMLPS*LMEIFR
Trigger: GCGAAAGATCTCCATGAGGCACGATGGCAACATGGT...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGTCATGGCCAAGGACATaGCAAATGGAGAGAAGACCA +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMSWPRT*QMERRP
Trigger: TGGTCTTCTCTCCATTTGGCATGTCCTTGGCCATGA...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCTCATGGCCAAGGACATaGCAAATGGAGAGAAGACCA +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPSWPRT*QMERRP
Trigger: TGGTCTTCTCTCCATTTGGCATGTCCTTGGCCATGA...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTCTGCCACTGCCTCAGTaGCCCTTTCATCAACTTCAA +
Preference number: 4 (lower is better)
Translates to: DGILHCPALSHPGCEFSPLPLPQ*PFHQLQ
Trigger: TTGAAGTTGATGAAAGGGGCACTGAGGCAGTGGCAG...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATCAAGATTCCTGCCACTaGCTCAGTGCCCCTTTCATC +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNQDSCH*LSAPFI
Trigger: GATGAAAGGGGCACTGAGGCAGTGGCAGGAATCTTG...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCTGTGAATTCTCCCCTTaGCCAATGTCTCCACACTGT +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPCEFSP*PMSPHC
Trigger: ACAGTGTGGAGACATTGGGCAAGGGGAGAATTCACA...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAACAGGAGCTCAGGGGGTaGTCCTGGACTAGGACACCA +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHEQELRG*SWTRTP
Trigger: TGGTGTCCTAGTCCAGGAGCACCCCCTGAGCTCCTG...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCCAGTGTGTGGCCTTaGGTCCTGGAAAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNSSVWP*VLEKSF
Trigger: GAAGGACTTTTCCAGGACCCAAGGCCACACACTGGA...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTACTGGCGACTGAGGACTaGGGGCCAAGCCGGGTACCA +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVLATED*GPSRVP
Trigger: TGGTACCCGGCTTGGCCCCCAGTCCTCAGTCGCCAG...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGACTTCCTCTTCCTCCTTaGGAGCCTGCACTACCCTGC +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARLPLPP*EPALPC
Trigger: GCAGGGTAGTGCAGGCTCCCAAGGAGGAAGAGGAAG...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTCAAGCTGCTGCCTGCTaGCCATCAGCCAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCQAAAC*PSARLS
Trigger: AGAAAGCCTGGCTGATGGCCAGCAGGCAGCAGCTTG...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTCAAGCTGCTGCCTGCTaGCCATCAGCCAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LRTKGTLSPAIHCWYPVCQAAAC*PSARLS
Trigger: AGAAAGCCTGGCTGATGGCCAGCAGGCAGCAGCTTG...ACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGCAAGCTGCTGCCTGCTaGCCATCAGCCAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLQAAAC*PSARLS
Trigger: AGAAAGCCTGGCTGATGGCCAGCAGGCAGCAGCTTG...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCCAAGGACATGCCAAATaGAGAGAAGACCATGTTGCC +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPQGHAK*REDHVA
Trigger: GGCAACATGGTCTTCTCTCCATTTGGCATGTCCTTG...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTAGGAGCCCGGGCTTGGTaGGCTTCAGGGCCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVGARAW*ASGPAS
Trigger: ACTTGCAGGCCCTGAAGCCCACCAAGCCCGGGCTCC...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGGGCAGTGAGTGGTGGTaGGTGAAATATCAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMGSEWW*VKYQAF
Trigger: AAAGGCTTGATATTTCACCCACCACCACTCACTGCC...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCTACTCCGGCAGTGAGTaGTGGTGGGTGAAATATCAA +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPYSGSE*WWVKYQ
Trigger: TTGATATTTCACCCACCACCACTCACTGCCGGAGTA...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR TCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGCTTGGTAGGGCAGTTTaGGGACATGACAACGAAAAT +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMLGRAV*GHDNEN
Trigger: ATTTTCGTTGTCATGTCCTCAAACTGCCCTACCAAG...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGAAGGTCAGCAAAGGGTaGGAAGATTCTTCTGATTCC +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMKVSKG*EDSSDS
Trigger: GGAATCAGAAGAATCTTCTCACCCTTTGCTGACCTT...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCAAGGTCAGCAAAGGGTaGGAAGATTCTTCTGATTCC +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPKVSKG*EDSSDS
Trigger: GGAATCAGAAGAATCTTCTCACCCTTTGCTGACCTT...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp ATGACTTATCCACTAGATGCAGAAGACACAGTGCCCAAGGCTGACAGTACTGTAGTCCCACCCAGGATGTaGATTCTCCCCTTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: MTYPLDAEDTVPKADSTVVPPRM*ILPLPN
Trigger: ATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGAC...TACAGTACTGTCAGCCTTGGGCACTGTGTCTTCTGCATCTAGTGGATAAGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTCCCACCCAGGATGTaGATTCTCCCCTTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLVPPRM*ILPLPN
Trigger: ATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGAC...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATGTGAGAACGTGTGGTTaGGTGTGTCTGTGTAGGAAC +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNVRTCG*VCLCRN
Trigger: GTTCCTACACAGACACACTCAACCACACGTTCTCAC...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTGTGAGTGGTGGTGGGTaGAATATCAAGCCTTTCAAG +
Preference number: 4 (lower is better)
Translates to: DGILHCPALSHPGCEFSPVSGGG*NIKPFK
Trigger: CTTGAAAGGCTTGATATTTCACCCACCACCACTCAC...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR GCA 90 bp TTAGATGGAAGGAAGAGTAAAAAGGGCTTGGAGACTAGACTCAGGAAAGGTAGGCTTCATGTGATCGGCTaGGGAGGCCAAGGAGTGCCT +
Preference number: 4 (lower is better)
Translates to: LDGRKSKKGLETRLRKGRLHVIG*GGQGVP
Trigger: AGGCACTCCTTGGCCTCCGCAGCCGATCACATGAAG...CCTACCTTTCCTGAGTCTAGTCTCCAAGCCCTTTTTACTCTTCCTTCCATCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTTCCTCGCTGGCCTCCTaGTCATCTTCCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLSSLAS*SSSSSS
Trigger: GGAGGAAGAGGAAGATGAGCAGGAGGCCAGCGAGGA...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAATCCTCGCTGGCCTCCTaGTCATCTTCCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHESSLAS*SSSSSS
Trigger: GGAGGAAGAGGAAGATGAGCAGGAGGCCAGCGAGGA...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGGAGGCAAACTTGCCTaGACCGTACATCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCGGKLA*TVHHGH
Trigger: GTGCCCATGATGTACGGTGCAGGCAAGTTTGCCTCC...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGGGAGGCAAACTTGCCTaGACCGTACATCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLGGKLA*TVHHGH
Trigger: GTGCCCATGATGTACGGTGCAGGCAAGTTTGCCTCC...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TTGGAGACTAGACTCAGGAAAGGTAGGCTTCTGACTCTGCCATTGCCACACTGGCTTCTGATTCCCATCTaGCTAAGCAGCTCATGCATC +
Preference number: 4 (lower is better)
Translates to: LETRLRKGRLLTLPLPHWLLIPI*LSSSCI
Trigger: GATGCATGAGCTGCTTAGGCAGATGGGAATCAGAAG...CCAGTGTGGCAATGGCAGAGTCAGAAGCCTACCTTTCCTGAGTCTAGTCTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATCTGCCACTGCCTCAGTaGCCCTTTCATCAACTTCAA +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNLPLPQ*PFHQLQ
Trigger: TTGAAGTTGATGAAAGGGGCACTGAGGCAGTGGCAG...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGTGAATTCTCCCCTTaGCCAATGTCTCCACACTGT +
Preference number: 4 (lower is better)
Translates to: DGILHCPALSHPGCEFSPCEFSP*PMSPHC
Trigger: ACAGTGTGGAGACATTGGGCAAGGGGAGAATTCACA...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATCCAGTAATTCCTGGGTaGTCCTGGACATATATCGCC +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNPVIPG*SWTYIA
Trigger: GGCGATATATGTCCAGGAGCACCCAGGAATTACTGG...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTACTGGTTCTGAGGGGCTaGGGTCTCTGGCGACTGAGG +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVLVLRG*GLWRLR
Trigger: CCTCAGTCGCCAGAGACCCCAGCCCCTCAGAACCAG...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTTGGCCTTCTCCTCGCTaGCCTCCTGCTCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLWPSPR*PPAHLP
Trigger: AGGAAGATGAGCAGGAGGCCAGCGAGGAGAAGGCCA...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTTCACCCTGGGACAAAGTTCATGCTTATATTCTGTTTAACCCCCATGGGTAGCTGGCCTTCTCCTCGCTaGCCTCCTGCTCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: FHPGTKFMLIFCLTPMGSWPSPR*PPAHLP
Trigger: AGGAAGATGAGCAGGAGGCCAGCGAGGAGAAGGCCA...GCTACCCATGGGGGTTAAACAGAATATAAGCATGAACTTTGTCCCAGGGTGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGTGCCATCGTGCCTCATaGAGATCTTTCGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLCHRAS*RSFAAG
Trigger: GCCTGCTGCGAAAGATCTCCATGAGGCACGATGGCA...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGTGCCATCGTGCCTCATaGAGATCTTTCGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLCHRAS*RSFAAG
Trigger: GCCTGCTGCGAAAGATCTCCATGAGGCACGATGGCA...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATGCATCAAGCCTGTCATaGCCAAGGACATGCCAAATG +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNASSLS*PRTCQM
Trigger: CATTTGGCATGTCCTTGGCCATGACAGGCTTGATGC...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTAGCCCTCTCTTGATCTaGGTTTCAGTCGGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCSPLLI*VSVGPV
Trigger: CACAGGGCCGACTGAAACCCAGATCAAGAGAGGGCT...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGAGCCCTCTCTTGATCTaGGTTTCAGTCGGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLSPLLI*VSVGPV
Trigger: CACAGGGCCGACTGAAACCCAGATCAAGAGAGGGCT...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGGCAGGAGCCCGGGCTTaGTGGGCTTCAGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQAGARA*WASGPA
Trigger: TGCAGGCCCTGAAGCCCACCAAGCCCGGGCTCCTGC...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCGAAGACAGGGTCAAATaGGGTCAACCATTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPEDRVK*GQPFPF
Trigger: AAAGGGAAATGGTTGACCCCATTTGACCCTGTCTTC...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGGACCACCAGCATGGTaGCATTTCCTTGGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCGPPAW*HFLGRA
Trigger: TGCCCTACCAAGGAAATGCCACCATGCTGGTGGTCC...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGGACCACCAGCATGGTaGCATTTCCTTGGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLGPPAW*HFLGRA
Trigger: TGCCCTACCAAGGAAATGCCACCATGCTGGTGGTCC...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTTCAAGGGCGAGGTaGTCACCCATTTTCTCCATG +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNSSRAR*SPIFSM
Trigger: CATGGAGAAAATGGGTGACCACCTCGCCCTTGAAGA...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTGGAGACTAGACTCAGGAAAGGTAGGCTTCTGACTCTGCCATTGCCACACTGGCTGCCATTGCCACACTaGAAGACCTTGGACAAGTAT +
Preference number: 4 (lower is better)
Translates to: LETRLRKGRLLTLPLPHWLPLPH*KTLDKY
Trigger: ATACTTGTCCAAGGTCTTCCAGTGTGGCAATGGCAG...CCAGTGTGGCAATGGCAGAGTCAGAAGCCTACCTTTCCTGAGTCTAGTCTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGAAGTGTCGACTTCGGTaGAGACAGGGTCAAATGGGG +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLKCRLR*RQGQMG
Trigger: CCCCATTTGACCCTGTCTTCACCGAAGTCGACACTT...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGAAGTGTCGACTTCGGTaGAGACAGGGTCAAATGGGG +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLKCRLR*RQGQMG
Trigger: CCCCATTTGACCCTGTCTTCACCGAAGTCGACACTT...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGGGCAGTTTGAGGACATaGCAACGAAAATTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMGSLRT*QRKFLS
Trigger: TGACAAGAATTTTCGTTGTCATGTCCTCAAACTGCC...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCGGCAGTTTGAGGACATaGCAACGAAAATTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPGSLRT*QRKFLS
Trigger: TGACAAGAATTTTCGTTGTCATGTCCTCAAACTGCC...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TTGGAGACTAGACTCAGGAAAGGTAGGCTTCTGACTCTGCCATTGCCACACTGGTGGTTTTCATGTTTCTaGGCCATGTCTCCACCAAGT +
Preference number: 4 (lower is better)
Translates to: LETRLRKGRLLTLPLPHWWFSCF*AMSPPS
Trigger: ACTTGGTGGAGACATGGCTCAGAAACATGAAAACCA...CCAGTGTGGCAATGGCAGAGTCAGAAGCCTACCTTTCCTGAGTCTAGTCTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGGTTTTCATGTTTCTaGGCCATGTCTCCACCAAGT +
Preference number: 4 (lower is better)
Translates to: DGILHCPALSHPGCEFSPWFSCF*AMSPPS
Trigger: ACTTGGTGGAGACATGGCTCAGAAACATGAAAACCA...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATAGCAGCATGCCATTCTaGGTAGTGGGATGGAATCTT +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNSSMPF*VVGWNL
Trigger: AAGATTCCATCCCACTACTCAGAATGGCATGCTGCT...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTAGCGGAGGCCAAGGAGTaGCTCCCTTCAGCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVAEAKE*LPSAAR
Trigger: TCTTGCAGCTGAAGGGAGGCACTCCTTGGCCTCCGC...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp CTAAGGAAGATCAGGGATATTTACGATTTTCCTTTTCACCCTGGGACAAAGTTCTACCAGCCACACCTGTaGCAGGAGGACGGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LRKIRDIYDFPFHPGTKFYQPHL*QEDGEQ
Trigger: CTGCTCTCCGTCCTCCTGGCACAGGTGTGGCTGGTA...GAACTTTGTCCCAGGGTGAAAAGGAAAATCGTAAATATCCCTGATCTTCCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTAGAGCCTGCACTACCCTaGTGGTCTGGTTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVEPALP*WSGSEG
Trigger: CCCCTCAGAACCAGACCAGCAGGGTAGTGCAGGCTC...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATGGCAAGCTGCTGCCTaGTGGCCATCAGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVWQAAA*WPSARL
Trigger: AAGCCTGGCTGATGGCCAGCAGGCAGCAGCTTGCCA...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp CTAAGGAAGATCAGGGATATTTACGATTTTCCTTTTCACCCTGGGACAAAGTTCTCCTTGGCAAGCTGCTaGCTGCTGGCCATCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LRKIRDIYDFPFHPGTKFSLASC*LLAISQ
Trigger: CTGGCTGATGGCCAGCAGGCAGCAGCTTGCCAAGGA...GAACTTTGTCCCAGGGTGAAAAGGAAAATCGTAAATATCCCTGATCTTCCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp CTAAGGAAGATCAGGGATATTTACGATTTTCCTTTTCACCCTGGGACAAAGTTCGTCTCCTTGGCAAGCTaGTGCCTGCTGGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: LRKIRDIYDFPFHPGTKFVSLAS*CLLAIS
Trigger: GCTGATGGCCAGCAGGCAGCAGCTTGCCAAGGAGAC...GAACTTTGTCCCAGGGTGAAAAGGAAAATCGTAAATATCCCTGATCTTCCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTAGTCTCCTTGGCAAGCTaGTGCCTGCTGGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVVSLAS*CLLAIS
Trigger: GCTGATGGCCAGCAGGCAGCAGCTTGCCAAGGAGAC...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTGGAGGCAAACTTGCCTaGACCGTACATCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLGGKLA*TVHHGH
Trigger: GTGCCCATGATGTACGGTGCAGGCAAGTTTGCCTCC...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGAGGTGGAGGCAAACTTaGCTGCACCGTACATCATGG +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLRWRQT*LHRTSW
Trigger: CCATGATGTACGGTGCAGGCAAGTTTGCCTCCACCT...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTAGGTGGAGGCAAACTTaGCTGCACCGTACATCATGG +
Preference number: 4 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCRWRQT*LHRTSW
Trigger: CCATGATGTACGGTGCAGGCAAGTTTGCCTCCACCT...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTCAAGATTCCTGCCACTaGCTCAGTGCCCCTTTCATC +
Preference number: 4 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCQDSCH*LSAPFI
Trigger: GATGAAAGGGGCACTGAGGCAGTGGCAGGAATCTTG...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGCAAGATTCCTGCCACTaGCTCAGTGCCCCTTTCATC +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLQDSCH*LSAPFI
Trigger: GATGAAAGGGGCACTGAGGCAGTGGCAGGAATCTTG...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGCAAGATTCCTGCCACTaGCTCAGTGCCCCTTTCATC +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLQDSCH*LSAPFI
Trigger: GATGAAAGGGGCACTGAGGCAGTGGCAGGAATCTTG...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGGAACACTCTCCCCTaGCATCCATTGCTGGTATCC +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARRNTLP*HPLLVS
Trigger: GGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCT...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATCACCATGGAAGCAGATaGTGTGATCAGGACTGGTTA +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNHHGSR*CDQDWL
Trigger: TAACCAGTCCTGATCACAGCATCTGCTTCCATGGTG...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTACAGGAGCTCAGGGGGTaGTCCTGGACTAGGACACCA +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVQELRG*SWTRTP
Trigger: TGGTGTCCTAGTCCAGGAGCACCCCCTGAGCTCCTG...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR GCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGGTGCCTCCCTTCAGCTaGAAGACTTCCTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLVPPFS*KTSFLF
Trigger: GAACAGGAAGGAAGTCTTGCAGCTGAAGGGAGGCAC...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGGGAGAGCAGGAGACTTaGCACCACCTTCATGTGATC +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLGEQET*HHLHVI
Trigger: GATCACATGAAGGTGGTGCCAAGTCTCCTGCTCTCC...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAACTGGCGACTGAGGACTaGGGGCCAAGCCGGGTACCA +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMELATED*GPSRVP
Trigger: TGGTACCCGGCTTGGCCCCCAGTCCTCAGTCGCCAG...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTAGATGGAAGGAAGAGTAAAAAGGGCTTGGAGACTAGACTCAGGAAAGGTAGGTGCCATCGTGCCTCATaGAGATCTTTCGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: LDGRKSKKGLETRLRKGRCHRAS*RSFAAG
Trigger: GCCTGCTGCGAAAGATCTCCATGAGGCACGATGGCA...CCTACCTTTCCTGAGTCTAGTCTCCAAGCCCTTTTTACTCTTCCTTCCATCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGGGAGCCCGGGCTTGGTaGGCTTCAGGGCCTGCAAGT +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQGARAW*ASGPAS
Trigger: ACTTGCAGGCCCTGAAGCCCACCAAGCCCGGGCTCC...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCACATCAAAATCCTTGTaGATGAAGGCAAAACTCCCC +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPTSKSL*MKAKLP
Trigger: GGGGAGTTTTGCCTTCATCCACAAGGATTTTGATGT...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCGATCATGAAATGAAATaGCCGGTCCACTTTGATGAC +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPDHEMK*PVHFDD
Trigger: GTCATCAAAGTGGACCGGCCATTTCATTTCATGATC...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGTCCGGCAGTGAGTGGTaGTGGGTGAAATATCAAGCC +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLSGSEW*WVKYQA
Trigger: GGCTTGATATTTCACCCACCACCACTCACTGCCGGA...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGATCCGGCAGTGAGTGGTaGTGGGTGAAATATCAAGCC +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARSGSEW*WVKYQA
Trigger: GGCTTGATATTTCACCCACCACCACTCACTGCCGGA...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp TTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTATCTACCCAACCCTTTaGAGTCTAGGCCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: LRTKGTLSPAIHCWYPVCIYPTL*SLGQEL
Trigger: GAGCTCCTGGCCTAGACTCCAAAGGGTTGGGTAGAT...ACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
3UTR CAA 72 bp CTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTGTTaGATACCTCAGATTCAGCATCTACTACAGCACGAA +
Preference number: 4 (lower is better)
Translates to: LPCHPLLVSCVC*IPQIQHLLQHE
Trigger: TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGCAATGGATGGCAGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGGGCACCACCTTCATGTaGTCGGCTGCGGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQGTTFM*SAAEAK
Trigger: CTTGGCCTCCGCAGCCGATCACATGAAGGTGGTGCC...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAAGGCACCACCTTCATGTaGTCGGCTGCGGAGGCCAAG +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMEGTTFM*SAAEAK
Trigger: CTTGGCCTCCGCAGCCGATCACATGAAGGTGGTGCC...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTAAGTGTCGACTTCGGTaGAGACAGGGTCAAATGGGG +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLKCRLR*RQGQMG
Trigger: CCCCATTTGACCCTGTCTTCACCGAAGTCGACACTT...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TTTCACCCTGGGACAAAGTTCATGCTTATATTCTGTTTAACCCCCATGGGTAGCAAGTGTCGACTTCGGTaGAGACAGGGTCAAATGGGG +
Preference number: 4 (lower is better)
Translates to: FHPGTKFMLIFCLTPMGSKCRLR*RQGQMG
Trigger: CCCCATTTGACCCTGTCTTCACCGAAGTCGACACTT...GCTACCCATGGGGGTTAAACAGAATATAAGCATGAACTTTGTCCCAGGGTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTGGTTTTCATGTTTCTaGGCCATGTCTCCACCAAGT +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNWFSCF*AMSPPS
Trigger: ACTTGGTGGAGACATGGCTCAGAAACATGAAAACCA...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATATTTCTTCCAGTAGCTaGGAGTTCACTAAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNISSSS*EFTKVS
Trigger: GCTGACCTTAGTGAACTCTCAGCTACTGGAAGAAAT...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGTTTCTTCATAGATCATaGAATGAAATGGCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMFLHRS*NEMAGP
Trigger: TGGACCGGCCATTTCATTTCATGATCTATGAAGAAA...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTGCTTATGCGTGTCCTaGATTATAGGAGAGTCGGAT +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNCLCVS*IIGESD
Trigger: ATCCGACTCTCCTATAATTCAGGACACGCATAAGCA...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp ATGACTTATCCACTAGATGCAGAAGACACAGTGCCCAAGGCTGACAGTACTGTACTCTGCCAAGCGATTTaGTGCACCATGGAAGCAGAT +
Preference number: 4 (lower is better)
Translates to: MTYPLDAEDTVPKADSTVLCQAI*CTMEAD
Trigger: ATCTGCTTCCATGGTGCATCAAATCGCTTGGCAGAG...TACAGTACTGTCAGCCTTGGGCACTGTGTCTTCTGCATCTAGTGGATAAGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp CTAAGGAAGATCAGGGATATTTACGATTTTCCTTTTCACCCTGGGACAAAGTTCCTTCATGTGATCGGCTaGGGAGGCCAAGGAGTGCCT +
Preference number: 4 (lower is better)
Translates to: LRKIRDIYDFPFHPGTKFLHVIG*GGQGVP
Trigger: AGGCACTCCTTGGCCTCCGCAGCCGATCACATGAAG...GAACTTTGTCCCAGGGTGAAAAGGAAAATCGTAAATATCCCTGATCTTCCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAACCATGTTGCCATCGTaGCTCATGGAGATCTTTCGC +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARTMLPS*LMEIFR
Trigger: GCGAAAGATCTCCATGAGGCACGATGGCAACATGGT...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGACCATGTTGCCATCGTaGCTCATGGAGATCTTTCGC +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLTMLPS*LMEIFR
Trigger: GCGAAAGATCTCCATGAGGCACGATGGCAACATGGT...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGAGAGAAGACCATGTTaGCATCGTGCCTCATGGAGA +
Preference number: 4 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCERRPC*HRASWR
Trigger: TCTCCATGAGGCACGATGGCAACATGGTCTTCTCTC...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGGAGAGAAGACCATGTTaGCATCGTGCCTCATGGAGA +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLERRPC*HRASWR
Trigger: TCTCCATGAGGCACGATGGCAACATGGTCTTCTCTC...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAGAGAGAAGACCATGTTaGCATCGTGCCTCATGGAGA +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARERRPC*HRASWR
Trigger: TCTCCATGAGGCACGATGGCAACATGGTCTTCTCTC...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAAGGTGGAGGCAAACTTaGCTGCACCGTACATCATGG +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHERWRQT*LHRTSW
Trigger: CCATGATGTACGGTGCAGGCAAGTTTGCCTCCACCT...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGATCGGATTCACCACCCTaGCCAGAAACAGAAGCATTC +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARSDSPP*PETEAF
Trigger: GAATGCTTCTGTTTCTGGGCAGGGTGGTGAATCCGA...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTTCGGATTCACCACCCTaGCCAGAAACAGAAGCATTC +
Preference number: 4 (lower is better)
Translates to: LRTKGTLSPAIHCWYPVCSDSPP*PETEAF
Trigger: GAATGCTTCTGTTTCTGGGCAGGGTGGTGAATCCGA...ACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGATCCCCTGCCATCCATTaGTGGTATCCTGTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARSPAIH*WYPVCV
Trigger: AACACACACAGGATACCAGCAATGGATGGCAGGGGA...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGTCCCCTGCCATCCATTaGTGGTATCCTGTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLSPAIH*WYPVCV
Trigger: AACACACACAGGATACCAGCAATGGATGGCAGGGGA...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGAGTGGGATGGAATCTTaGATTGTCCTGCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLSGMES*IVLLCP
Trigger: GGGACAGAGCAGGACAATGCAAGATTCCATCCCACT...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGAGTGGGATGGAATCTTaGATTGTCCTGCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLSGMES*IVLLCP
Trigger: GGGACAGAGCAGGACAATGCAAGATTCCATCCCACT...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCCCTTATCCATGGTTTTaGTTTCTGCAGTCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPPYPWF*FLQSQL
Trigger: TAACTGAGACTGCAGAAAGCAAAACCATGGATAAGG...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTATGCAGAAGACACAGTaGCCAAGGCTGACAGTACTG +
Preference number: 4 (lower is better)
Translates to: LRTKGTLSPAIHCWYPVCMQKTQ*PRLTVL
Trigger: CAGTACTGTCAGCCTTGGGCACTGTGTCTTCTGCAT...ACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGATGCAGAAGACACAGTaGCCAAGGCTGACAGTACTG +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLMQKTQ*PRLTVL
Trigger: CAGTACTGTCAGCCTTGGGCACTGTGTCTTCTGCAT...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp TTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTGGTAGCTGTAGTGCATaGTGTTTACCTGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: LRTKGTLSPAIHCWYPVCGSCSA*CLPGPH
Trigger: ATGGGGACCAGGTAAACAGCATGCACTACAGCTACC...ACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGCTTGTCCTGCAGTCTaGAGTGGTAGCCCAGTAATT +
Preference number: 4 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCACPAV*SGSPVI
Trigger: AATTACTGGGCTACCACTGCAGACTGCAGGACAAGC...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR GCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGCTTGTCCTGCAGTCTaGAGTGGTAGCCCAGTAATT +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLACPAV*SGSPVI
Trigger: AATTACTGGGCTACCACTGCAGACTGCAGGACAAGC...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp CTAAGGAAGATCAGGGATATTTACGATTTTCCTTTTCACCCTGGGACAAAGTTCCTTCCTCTTCCTCCTTaGGAGCCTGCACTACCCTGC +
Preference number: 4 (lower is better)
Translates to: LRKIRDIYDFPFHPGTKFLPLPP*EPALPC
Trigger: GCAGGGTAGTGCAGGCTCCCAAGGAGGAAGAGGAAG...GAACTTTGTCCCAGGGTGAAAAGGAAAATCGTAAATATCCCTGATCTTCCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATGGCCTTCTCCTCGCTaGCCTCCTGCTCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVWPSPR*PPAHLP
Trigger: AGGAAGATGAGCAGGAGGCCAGCGAGGAGAAGGCCA...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTGCATCAAGCCTGTCATaGCCAAGGACATGCCAAATG +
Preference number: 4 (lower is better)
Translates to: LRTKGTLSPAIHCWYPVCASSLS*PRTCQM
Trigger: CATTTGGCATGTCCTTGGCCATGACAGGCTTGATGC...ACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGGCATCAAGCCTGTCATaGCCAAGGACATGCCAAATG +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLASSLS*PRTCQM
Trigger: CATTTGGCATGTCCTTGGCCATGACAGGCTTGATGC...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTACATCAAAATCCTTGTaGATGAAGGCAAAACTCCCC +
Preference number: 4 (lower is better)
Translates to: DGILHCPALSHPGCEFSPTSKSL*MKAKLP
Trigger: GGGGAGTTTTGCCTTCATCCACAAGGATTTTGATGT...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATGAAGACAGGGTCAAATaGGGTCAACCATTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNEDRVK*GQPFPF
Trigger: AAAGGGAAATGGTTGACCCCATTTGACCCTGTCTTC...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGATCTTCAAGGGCGAGGTaGTCACCCATTTTCTCCATG +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARSSRAR*SPIFSM
Trigger: CATGGAGAAAATGGGTGACCACCTCGCCCTTGAAGA...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGATCTCCACCAAGTCTGTaGTCAGGTAGTCTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARSPPSL*SGSLQG
Trigger: CCCTTGAAGACTACCTGACCACAGACTTGGTGGAGA...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGTCTCCACCAAGTCTGTaGTCAGGTAGTCTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLSPPSL*SGSLQG
Trigger: CCCTTGAAGACTACCTGACCACAGACTTGGTGGAGA...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTGATCATGAAATGAAATaGCCGGTCCACTTTGATGAC +
Preference number: 4 (lower is better)
Translates to: DGILHCPALSHPGCEFSPDHEMK*PVHFDD
Trigger: GTCATCAAAGTGGACCGGCCATTTCATTTCATGATC...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCTGCTGTGATCAGGACTaGTTAGAGCTATTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPCCDQD*LELFSS
Trigger: AGAAGAAAATAGCTCTAACCAGTCCTGATCACAGCA...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCATGCTGTTTACCTaGTCCCCATCAGATGTTTTA +
Preference number: 4 (lower is better)
Translates to: DGILHCPALSHPGCEFSPCMLFT*SPSDVL
Trigger: TAAAACATCTGATGGGGACCAGGTAAACAGCATGCA...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp TTGGAGACTAGACTCAGGAAAGGTAGGCTTCTGACTCTGCCATTGCCACACTGGTGCATGCTGTTTACCTaGTCCCCATCAGATGTTTTA +
Preference number: 4 (lower is better)
Translates to: LETRLRKGRLLTLPLPHWCMLFT*SPSDVL
Trigger: TAAAACATCTGATGGGGACCAGGTAAACAGCATGCA...CCAGTGTGGCAATGGCAGAGTCAGAAGCCTACCTTTCCTGAGTCTAGTCTCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGGCTTTGCAGTGTATGTaGTGGGAAGAAGGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLALQCM*WEEGRS
Trigger: ACTCCTGCCTTCTTCCCACCACATACACTGCAAAGC...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGGCCTCCCCTCAGCCCTaGGAAGGGGAGACCTGCTTA +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQASPQP*EGETCL
Trigger: TAAGCAGGTCTCCCCTTCCCAGGGCTGAGGGGAGGC...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAAGCCTCCCCTCAGCCCTaGGAAGGGGAGACCTGCTTA +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMEASPQP*EGETCL
Trigger: TAAGCAGGTCTCCCCTTCCCAGGGCTGAGGGGAGGC...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR TCA 90 bp AGTGAAGACTTCTACAATGTTAAGATTTCCCCCGCTCGGTTGGAAACCCTGAATGCTGAATCCGAAGTTTaGAGTCTCCTTGGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: SEDFYNVKISPARLETLNAESEV*SLLGKL
Trigger: CAGCTTGCCAAGGAGACTTCAAACTTCGGATTCAGC...ATTCAGGGTTTCCAACCGAGCGGGGGAAATCTTAACATTGTAGAAGTCTTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGCTGAATCCGAAGTTTaGAGTCTCCTTGGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHEAESEV*SLLGKL
Trigger: CAGCTTGCCAAGGAGACTTCAAACTTCGGATTCAGC...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGATCTTTCGCAGCAGGCTaGATCCGAAGTTTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARSFAAG*IRSLKS
Trigger: AGACTTCAAACTTCGGATTCAGCCTGCTGCGAAAGA...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTAGTGGAGCCCTCTCTTaGTCTGGGTTTCAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: KQSKSLKQHAILSSGMESSGALS*SGFQSA
Trigger: GGCCGACTGAAACCCAGATCAAGAGAGGGCTCCACT...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGTCAACCATTTCCCTTTaGACAAGATGTAATCCACAA +
Preference number: 4 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMSTISL*TRCNPQ
Trigger: TTGTGGATTACATCTTGTTCAAAGGGAAATGGTTGA...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCACTTCTGATCTAGCTTaGACTTCGGAAAGAAAACTT +
Preference number: 4 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPTSDLA*TSERKL
Trigger: AAGTTTTCTTTCCGAAGTTCAAGCTAGATCAGAAGT...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTAGTCCCACCCAGGATGTaGATTCTCCCCTTGCCCAAT +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVVPPRM*ILPLPN
Trigger: ATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGAC...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTAGCAGCATGCCATTCTaGGTAGTGGGATGGAATCTT +
Preference number: 4 (lower is better)
Translates to: LRTKGTLSPAIHCWYPVCSSMPF*VVGWNL
Trigger: AAGATTCCATCCCACTACTCAGAATGGCATGCTGCT...ACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGAGCAGCATGCCATTCTaGGTAGTGGGATGGAATCTT +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLSSMPF*VVGWNL
Trigger: AAGATTCCATCCCACTACTCAGAATGGCATGCTGCT...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TTAGATGGAAGGAAGAGTAAAAAGGGCTTGGAGACTAGACTCAGGAAAGGTAGGCTCTGCCAAGCGATTTaGTGCACCATGGAAGCAGAT +
Preference number: 4 (lower is better)
Translates to: LDGRKSKKGLETRLRKGRLCQAI*CTMEAD
Trigger: ATCTGCTTCCATGGTGCATCAAATCGCTTGGCAGAG...CCTACCTTTCCTGAGTCTAGTCTCCAAGCCCTTTTTACTCTTCCTTCCATCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGGAACTAGATGATCTGTaGTTCAGCCAATGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLELDDL*FSQCLC
Trigger: GCAGAGGCATTGGCTGAATCACAGATCATCTAGTTC...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp TTGGAGACTAGACTCAGGAAAGGTAGGCTTCTGACTCTGCCATTGCCACACTGGATCTTTGAATTGAAATaGAACAGGCTCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LETRLRKGRLLTLPLPHWIFELK*NRLFSW
Trigger: CCAGCTGAAGAGCCTGTTTCATTTCAATTCAAAGAT...CCAGTGTGGCAATGGCAGAGTCAGAAGCCTACCTTTCCTGAGTCTAGTCTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGAGTGGTGGTGGGTaGAATATCAAGCCTTTCAAG +
Preference number: 4 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCVSGGG*NIKPFK
Trigger: CTTGAAAGGCTTGATATTTCACCCACCACCACTCAC...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR GCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAAGCGGAGGCCAAGGAGTaGCTCCCTTCAGCTGCAAGA +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMEAEAKE*LPSAAR
Trigger: TCTTGCAGCTGAAGGGAGGCACTCCTTGGCCTCCGC...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGTACCAGCCACACCTGTaGCAGGAGGACGGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQYQPHL*QEDGEQ
Trigger: CTGCTCTCCGTCCTCCTGGCACAGGTGTGGCTGGTA...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAAGAGCCTGCACTACCCTaGTGGTCTGGTTCTGAGGGG +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMEEPALP*WSGSEG
Trigger: CCCCTCAGAACCAGACCAGCAGGGTAGTGCAGGCTC...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTCCTCGCTGGCCTCCTaGTCATCTTCCTCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: KQSKSLKQHAILSSGMESSSLAS*SSSSSS
Trigger: GGAGGAAGAGGAAGATGAGCAGGAGGCCAGCGAGGA...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGTGGCAAGCTGCTGCCTaGTGGCCATCAGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQWQAAA*WPSARL
Trigger: AAGCCTGGCTGATGGCCAGCAGGCAGCAGCTTGCCA...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TTTCACCCTGGGACAAAGTTCATGCTTATATTCTGTTTAACCCCCATGGGTAGCGAGAGAAGACCATGTTaGCATCGTGCCTCATGGAGA +
Preference number: 4 (lower is better)
Translates to: FHPGTKFMLIFCLTPMGSERRPC*HRASWR
Trigger: TCTCCATGAGGCACGATGGCAACATGGTCTTCTCTC...GCTACCCATGGGGGTTAAACAGAATATAAGCATGAACTTTGTCCCAGGGTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTGAGAGAAGACCATGTTaGCATCGTGCCTCATGGAGA +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLERRPC*HRASWR
Trigger: TCTCCATGAGGCACGATGGCAACATGGTCTTCTCTC...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGATCATGGCCAAGGACATaGCAAATGGAGAGAAGACCA +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARSWPRT*QMERRP
Trigger: TGGTCTTCTCTCCATTTGGCATGTCCTTGGCCATGA...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTTCATGGCCAAGGACATaGCAAATGGAGAGAAGACCA +
Preference number: 4 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCSWPRT*QMERRP
Trigger: TGGTCTTCTCTCCATTTGGCATGTCCTTGGCCATGA...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTAGGAGGCAAACTTGCCTaGACCGTACATCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVGGKLA*TVHHGH
Trigger: GTGCCCATGATGTACGGTGCAGGCAAGTTTGCCTCC...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGCTTCTGATTCCCATCTaGCTAAGCAGCTCATGCATC +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLLLIPI*LSSSCI
Trigger: GATGCATGAGCTGCTTAGGCAGATGGGAATCAGAAG...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGACTTCTGATTCCCATCTaGCTAAGCAGCTCATGCATC +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARLLIPI*LSSSCI
Trigger: GATGCATGAGCTGCTTAGGCAGATGGGAATCAGAAG...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTCTGCCACTGCCTCAGTaGCCCTTTCATCAACTTCAA +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLLPLPQ*PFHQLQ
Trigger: TTGAAGTTGATGAAAGGGGCACTGAGGCAGTGGCAG...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AGTGAAGACTTCTACAATGTTAAGATTTCCCCCGCTCGGTTGGAAACCCTGAATTCGGATTCACCACCCTaGCCAGAAACAGAAGCATTC +
Preference number: 4 (lower is better)
Translates to: SEDFYNVKISPARLETLNSDSPP*PETEAF
Trigger: GAATGCTTCTGTTTCTGGGCAGGGTGGTGAATCCGA...ATTCAGGGTTTCCAACCGAGCGGGGGAAATCTTAACATTGTAGAAGTCTTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAATCGGATTCACCACCCTaGCCAGAAACAGAAGCATTC +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHESDSPP*PETEAF
Trigger: GAATGCTTCTGTTTCTGGGCAGGGTGGTGAATCCGA...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTTGTGAATTCTCCCCTTaGCCAATGTCTCCACACTGT +
Preference number: 4 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCCEFSP*PMSPHC
Trigger: ACAGTGTGGAGACATTGGGCAAGGGGAGAATTCACA...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAAGTGGGATGGAATCTTaGATTGTCCTGCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHESGMES*IVLLCP
Trigger: GGGACAGAGCAGGACAATGCAAGATTCCATCCCACT...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTAGTGGGATGGAATCTTaGATTGTCCTGCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLSGMES*IVLLCP
Trigger: GGGACAGAGCAGGACAATGCAAGATTCCATCCCACT...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AGTGAAGACTTCTACAATGTTAAGATTTCCCCCGCTCGGTTGGAAACCCTGAATGGTAGCTGTAGTGCATaGTGTTTACCTGGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: SEDFYNVKISPARLETLNGSCSA*CLPGPH
Trigger: ATGGGGACCAGGTAAACAGCATGCACTACAGCTACC...ATTCAGGGTTTCCAACCGAGCGGGGGAAATCTTAACATTGTAGAAGTCTTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGCAGGAGCTCAGGGGGTaGTCCTGGACTAGGACACCA +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQQELRG*SWTRTP
Trigger: TGGTGTCCTAGTCCAGGAGCACCCCCTGAGCTCCTG...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR GCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTCCAGTAATTCCTGGGTaGTCCTGGACATATATCGCC +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLPVIPG*SWTYIA
Trigger: GGCGATATATGTCCAGGAGCACCCAGGAATTACTGG...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAAAGACTTCCAGTGTGTaGCCTTGGGTCCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHEKTSSV*PWVLEK
Trigger: CTTTTCCAGGACCCAAGGCCACACACTGGAAGTCTT...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGGCCTTCTCCTCGCTaGCCTCCTGCTCATCTTCCT +
Preference number: 4 (lower is better)
Translates to: KQSKSLKQHAILSSGMESWPSPR*PPAHLP
Trigger: AGGAAGATGAGCAGGAGGCCAGCGAGGAGAAGGCCA...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTCAAGGACATGCCAAATaGAGAGAAGACCATGTTGCC +
Preference number: 4 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCQGHAK*REDHVA
Trigger: GGCAACATGGTCTTCTCTCCATTTGGCATGTCCTTG...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCATCAAACAGTTTaGGAATTTTCCCCCGAGTCT +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNSHQTV*EFSPES
Trigger: AGACTCGGGGGAAAATTCCCAAACTGTTTGATGAGA...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGTTGTACTTGTCCAGGTaGAAAGTGTCGACTTCGGTG +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLLYLSR*KVSTSV
Trigger: CACCGAAGTCGACACTTTCCACCTGGACAAGTACAA...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTTTGTACTTGTCCAGGTaGAAAGTGTCGACTTCGGTG +
Preference number: 4 (lower is better)
Translates to: LRTKGTLSPAIHCWYPVCLYLSR*KVSTSV
Trigger: CACCGAAGTCGACACTTTCCACCTGGACAAGTACAA...ACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTTCTCCACCAAGTCTGTaGTCAGGTAGTCTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLSPPSL*SGSLQG
Trigger: CCCTTGAAGACTACCTGACCACAGACTTGGTGGAGA...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAATCTCCACCAAGTCTGTaGTCAGGTAGTCTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHESPPSL*SGSLQG
Trigger: CCCTTGAAGACTACCTGACCACAGACTTGGTGGAGA...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGGCAGTGAGTGGTGGTaGGTGAAATATCAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLGSEWW*VKYQAF
Trigger: AAAGGCTTGATATTTCACCCACCACCACTCACTGCC...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTTACTCCGGCAGTGAGTaGTGGTGGGTGAAATATCAA +
Preference number: 4 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCYSGSE*WWVKYQ
Trigger: TTGATATTTCACCCACCACCACTCACTGCCGGAGTA...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGGCCACTTCTCAGCCCTaGGACAGCACACATCCCTGC +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQATSQP*DSTHPC
Trigger: GCAGGGATGTGTGCTGTCCCAGGGCTGAGAAGTGGC...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGATTCCTAGACAGAACCTaGGCAGTAAGGAATCACCAG +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARFLDRT*AVRNHQ
Trigger: CTGGTGATTCCTTACTGCCCAGGTTCTGTCTAGGAA...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGTTCCTAGACAGAACCTaGGCAGTAAGGAATCACCAG +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLFLDRT*AVRNHQ
Trigger: CTGGTGATTCCTTACTGCCCAGGTTCTGTCTAGGAA...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAACTCAGGGGGTGCTCCTaGACTAGGACACCATCCAGC +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMELRGCS*TRTPSS
Trigger: GCTGGATGGTGTCCTAGTCCAGGAGCACCCCCTGAG...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTTATGTACAGTCCCTGTaGAGTGTAGGATGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCYVQSL*SVGWRS
Trigger: AGACCTCCATCCTACACTCCACAGGGACTGTACATA...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000554723.5
ENST00000616057.2
CDS-3UTR TCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAAAGTGGAGCCCTCTCTTaGTCTGGGTTTCAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMESGALS*SGFQSA
Trigger: GGCCGACTGAAACCCAGATCAAGAGAGGGCTCCACT...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGAGTGGAGCCCTCTCTTaGTCTGGGTTTCAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQSGALS*SGFQSA
Trigger: GGCCGACTGAAACCCAGATCAAGAGAGGGCTCCACT...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTCTTGGTAGGGCAGTTTaGGGACATGACAACGAAAAT +
Preference number: 4 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCLGRAV*GHDNEN
Trigger: ATTTTCGTTGTCATGTCCTCAAACTGCCCTACCAAG...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGTGGTTTTCATGTTTCTaGGCCATGTCTCCACCAAGT +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLWFSCF*AMSPPS
Trigger: ACTTGGTGGAGACATGGCTCAGAAACATGAAAACCA...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAAGGTCAGCAAAGGGTaGGAAGATTCTTCTGATTCC +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARKVSKG*EDSSDS
Trigger: GGAATCAGAAGAATCTTCTCACCCTTTGCTGACCTT...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGAAGGTCAGCAAAGGGTaGGAAGATTCTTCTGATTCC +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLKVSKG*EDSSDS
Trigger: GGAATCAGAAGAATCTTCTCACCCTTTGCTGACCTT...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGATTTCTTCCAGTAGCTaGGAGTTCACTAAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLISSSS*EFTKVS
Trigger: GCTGACCTTAGTGAACTCTCAGCTACTGGAAGAAAT...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGATGCTTATGCGTGTCCTaGATTATAGGAGAGTCGGAT +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARCLCVS*IIGESD
Trigger: ATCCGACTCTCCTATAATTCAGGACACGCATAAGCA...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TTTCACCCTGGGACAAAGTTCATGCTTATATTCTGTTTAACCCCCATGGGTAGCAGCAGCATGCCATTCTaGGTAGTGGGATGGAATCTT +
Preference number: 4 (lower is better)
Translates to: FHPGTKFMLIFCLTPMGSSSMPF*VVGWNL
Trigger: AAGATTCCATCCCACTACTCAGAATGGCATGCTGCT...GCTACCCATGGGGGTTAAACAGAATATAAGCATGAACTTTGTCCCAGGGTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAAGCAGCATGCCATTCTaGGTAGTGGGATGGAATCTT +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHESSMPF*VVGWNL
Trigger: AAGATTCCATCCCACTACTCAGAATGGCATGCTGCT...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TTAGATGGAAGGAAGAGTAAAAAGGGCTTGGAGACTAGACTCAGGAAAGGTAGGAGCAGCATGCCATTCTaGGTAGTGGGATGGAATCTT +
Preference number: 4 (lower is better)
Translates to: LDGRKSKKGLETRLRKGRSSMPF*VVGWNL
Trigger: AAGATTCCATCCCACTACTCAGAATGGCATGCTGCT...CCTACCTTTCCTGAGTCTAGTCTCCAAGCCCTTTTTACTCTTCCTTCCATCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTACAGCATATATATGTaGGAACGTGTGGTTGAGTGT +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNYSIYM*ERVVEC
Trigger: ACACTCAACCACACGTTCTCACATATATATGCTGTA...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGCACCATCCAGCATGGTaGGGACGCACCTTCCTAGAC +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQHHPAW*GRTFLD
Trigger: GTCTAGGAAGGTGCGTCCTCACCATGCTGGATGGTG...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR GCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGCTTCATGTGATCGGCTaGGGAGGCCAAGGAGTGCCT +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQLHVIG*GGQGVP
Trigger: AGGCACTCCTTGGCCTCCGCAGCCGATCACATGAAG...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTTCATGGCCAAGGACATaGCAAATGGAGAGAAGACCA +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLSWPRT*QMERRP
Trigger: TGGTCTTCTCTCCATTTGGCATGTCCTTGGCCATGA...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAACTTCTGATTCCCATCTaGCTAAGCAGCTCATGCATC +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHELLIPI*LSSSCI
Trigger: GATGCATGAGCTGCTTAGGCAGATGGGAATCAGAAG...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp GCCTGTGTACTTGGGAAATCTGAAACTGAGTGTCTTAGGAACTTCTTAAAGCAACAAGATTCCTGCCACTaGCTCAGTGCCCCTTTCATC +
Preference number: 4 (lower is better)
Translates to: ACVLGKSETECLRNFLKQQDSCH*LSAPFI
Trigger: GATGAAAGGGGCACTGAGGCAGTGGCAGGAATCTTG...TTGCTTTAAGAAGTTCCTAAGACACTCAGTTTCAGATTTCCCAAGTACACAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp CTAAGGAAGATCAGGGATATTTACGATTTTCCTTTTCACCCTGGGACAAAGTTCAGGAACACTCTCCCCTaGCATCCATTGCTGGTATCC +
Preference number: 4 (lower is better)
Translates to: LRKIRDIYDFPFHPGTKFRNTLP*HPLLVS
Trigger: GGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCT...GAACTTTGTCCCAGGGTGAAAAGGAAAATCGTAAATATCCCTGATCTTCCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp TTTCACCCTGGGACAAAGTTCATGCTTATATTCTGTTTAACCCCCATGGGTAGCTGTGAATTCTCCCCTTaGCCAATGTCTCCACACTGT +
Preference number: 4 (lower is better)
Translates to: FHPGTKFMLIFCLTPMGSCEFSP*PMSPHC
Trigger: ACAGTGTGGAGACATTGGGCAAGGGGAGAATTCACA...GCTACCCATGGGGGTTAAACAGAATATAAGCATGAACTTTGTCCCAGGGTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp AGTGAAGACTTCTACAATGTTAAGATTTCCCCCGCTCGGTTGGAAACCCTGAATCACCATGGAAGCAGATaGTGTGATCAGGACTGGTTA +
Preference number: 4 (lower is better)
Translates to: SEDFYNVKISPARLETLNHHGSR*CDQDWL
Trigger: TAACCAGTCCTGATCACAGCATCTGCTTCCATGGTG...ATTCAGGGTTTCCAACCGAGCGGGGGAAATCTTAACATTGTAGAAGTCTTCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGCTTCCTCTTCCTCCTTaGGAGCCTGCACTACCCTGC +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQLPLPP*EPALPC
Trigger: GCAGGGTAGTGCAGGCTCCCAAGGAGGAAGAGGAAG...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGCAAGCTGCTGCCTGCTaGCCATCAGCCAGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQQAAAC*PSARLS
Trigger: AGAAAGCCTGGCTGATGGCCAGCAGGCAGCAGCTTG...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCCATCGTGCCTCATaGAGATCTTTCGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: KQSKSLKQHAILSSGMESCHRAS*RSFAAG
Trigger: GCCTGCTGCGAAAGATCTCCATGAGGCACGATGGCA...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAACAAGGACATGCCAAATaGAGAGAAGACCATGTTGCC +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHEQGHAK*REDHVA
Trigger: GGCAACATGGTCTTCTCTCCATTTGGCATGTCCTTG...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTAGCCCTCTCTTGATCTaGGTTTCAGTCGGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: KQSKSLKQHAILSSGMESSPLLI*VSVGPV
Trigger: CACAGGGCCGACTGAAACCCAGATCAAGAGAGGGCT...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAGAAGACAGGGTCAAATaGGGTCAACCATTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTAREDRVK*GQPFPF
Trigger: AAAGGGAAATGGTTGACCCCATTTGACCCTGTCTTC...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTTTGTACTTGTCCAGGTaGAAAGTGTCGACTTCGGTG +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLLYLSR*KVSTSV
Trigger: CACCGAAGTCGACACTTTCCACCTGGACAAGTACAA...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTAATTCTTGTCAAAGGTaGAGGCAAACTTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: LRTKGTLSPAIHCWYPVCNSCQR*RQTCLH
Trigger: GTGCAGGCAAGTTTGCCTCCACCTTTGACAAGAATT...ACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTGGACCACCAGCATGGTaGCATTTCCTTGGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: KQSKSLKQHAILSSGMESGPPAW*HFLGRA
Trigger: TGCCCTACCAAGGAAATGCCACCATGCTGGTGGTCC...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTTAAGACTCGACACTTaGCCGGGCGTGGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: KQSKSLKQHAILSSGMESLRLDT*PGVVAH
Trigger: ATGAGCCACCACGCCCGGCCAAGTGTCGAGTCTTAA...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATCCGGCAGTGAGTGGTaGTGGGTGAAATATCAAGCC +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVSGSEW*WVKYQA
Trigger: GGCTTGATATTTCACCCACCACCACTCACTGCCGGA...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTTTCCTAGACAGAACCTaGGCAGTAAGGAATCACCAG +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLFLDRT*AVRNHQ
Trigger: CTGGTGATTCCTTACTGCCCAGGTTCTGTCTAGGAA...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTTATGTACAGTCCCTGTaGAGTGTAGGATGGAGGTCT +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLYVQSL*SVGWRS
Trigger: AGACCTCCATCCTACACTCCACAGGGACTGTACATA...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554723.5
ENST00000616057.2
3UTR CAA 72 bp ACTAGACTCAGGAAAGGTAGGCTTCTGACTCTGCCATaGCCACACTGGAAGACCTTGGACAAGTATTTTGTT +
Preference number: 4 (lower is better)
Translates to: TRLRKGRLLTLP*PHWKTLDKYFV
Trigger: AACAAAATACTTGTCCAAGGTCTTCCAGTGTGGCAATGGCAGAGTCAGAAGCCTACCTTTCCTGAGTCTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTAGCTGAATCCGAAGTTTaGAGTCTCCTTGGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVAESEV*SLLGKL
Trigger: CAGCTTGCCAAGGAGACTTCAAACTTCGGATTCAGC...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAGGCAGTTTGAGGACATaGCAACGAAAATTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARGSLRT*QRKFLS
Trigger: TGACAAGAATTTTCGTTGTCATGTCCTCAAACTGCC...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAACTTGGTAGGGCAGTTTaGGGACATGACAACGAAAAT +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHELGRAV*GHDNEN
Trigger: ATTTTCGTTGTCATGTCCTCAAACTGCCCTACCAAG...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTCTTGGTAGGGCAGTTTaGGGACATGACAACGAAAAT +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLLGRAV*GHDNEN
Trigger: ATTTTCGTTGTCATGTCCTCAAACTGCCCTACCAAG...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTATTTCTTCCAGTAGCTaGGAGTTCACTAAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLISSSS*EFTKVS
Trigger: GCTGACCTTAGTGAACTCTCAGCTACTGGAAGAAAT...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TTAGATGGAAGGAAGAGTAAAAAGGGCTTGGAGACTAGACTCAGGAAAGGTAGGTGCTTATGCGTGTCCTaGATTATAGGAGAGTCGGAT +
Preference number: 4 (lower is better)
Translates to: LDGRKSKKGLETRLRKGRCLCVS*IIGESD
Trigger: ATCCGACTCTCCTATAATTCAGGACACGCATAAGCA...CCTACCTTTCCTGAGTCTAGTCTCCAAGCCCTTTTTACTCTTCCTTCCATCTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGACCAAAGGCTTTATCTTaGCATAGTGTTCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARPKALS*HSVLIC
Trigger: GCAGATGAGAACACTATGTCAAGATAAAGCCTTTGG...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGAGAGAGAGAAGCACATaGCTCAAGGAGAATGTTTAC +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLRERST*LKENVY
Trigger: GTAAACATTCTCCTTGAGTCATGTGCTTCTCTCTCT...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp ATGACTTATCCACTAGATGCAGAAGACACAGTGCCCAAGGCTGACAGTACTGTAAGAGAGAGAAGCACATaGCTCAAGGAGAATGTTTAC +
Preference number: 4 (lower is better)
Translates to: MTYPLDAEDTVPKADSTVRERST*LKENVY
Trigger: GTAAACATTCTCCTTGAGTCATGTGCTTCTCTCTCT...TACAGTACTGTCAGCCTTGGGCACTGTGTCTTCTGCATCTAGTGGATAAGTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp GCCTGTGTACTTGGGAAATCTGAAACTGAGTGTCTTAGGAACTTCTTAAAGCAAACCATGTTGCCATCGTaGCTCATGGAGATCTTTCGC +
Preference number: 4 (lower is better)
Translates to: ACVLGKSETECLRNFLKQTMLPS*LMEIFR
Trigger: GCGAAAGATCTCCATGAGGCACGATGGCAACATGGT...TTGCTTTAAGAAGTTCCTAAGACACTCAGTTTCAGATTTCCCAAGTACACAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAAGGAGGCAAACTTGCCTaGACCGTACATCATGGGCAC +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMEGGKLA*TVHHGH
Trigger: GTGCCCATGATGTACGGTGCAGGCAAGTTTGCCTCC...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp CTAAGGAAGATCAGGGATATTTACGATTTTCCTTTTCACCCTGGGACAAAGTTCCTGCCACTGCCTCAGTaGCCCTTTCATCAACTTCAA +
Preference number: 4 (lower is better)
Translates to: LRKIRDIYDFPFHPGTKFLPLPQ*PFHQLQ
Trigger: TTGAAGTTGATGAAAGGGGCACTGAGGCAGTGGCAG...GAACTTTGTCCCAGGGTGAAAAGGAAAATCGTAAATATCCCTGATCTTCCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp GCCTGTGTACTTGGGAAATCTGAAACTGAGTGTCTTAGGAACTTCTTAAAGCAATCGGATTCACCACCCTaGCCAGAAACAGAAGCATTC +
Preference number: 4 (lower is better)
Translates to: ACVLGKSETECLRNFLKQSDSPP*PETEAF
Trigger: GAATGCTTCTGTTTCTGGGCAGGGTGGTGAATCCGA...TTGCTTTAAGAAGTTCCTAAGACACTCAGTTTCAGATTTCCCAAGTACACAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATCCCCTGCCATCCATTaGTGGTATCCTGTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVSPAIH*WYPVCV
Trigger: AACACACACAGGATACCAGCAATGGATGGCAGGGGA...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp CTAAGGAAGATCAGGGATATTTACGATTTTCCTTTTCACCCTGGGACAAAGTTCTCCCCTGCCATCCATTaGTGGTATCCTGTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: LRKIRDIYDFPFHPGTKFSPAIH*WYPVCV
Trigger: AACACACACAGGATACCAGCAATGGATGGCAGGGGA...GAACTTTGTCCCAGGGTGAAAAGGAAAATCGTAAATATCCCTGATCTTCCTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp TTGGAGACTAGACTCAGGAAAGGTAGGCTTCTGACTCTGCCATTGCCACACTGGTGGTATTGCAGTGCTTaGATTCAAGTAACTCATTTT +
Preference number: 4 (lower is better)
Translates to: LETRLRKGRLLTLPLPHWWYCSA*IQVTHF
Trigger: AAAATGAGTTACTTGAATGCAAGCACTGCAATACCA...CCAGTGTGGCAATGGCAGAGTCAGAAGCCTACCTTTCCTGAGTCTAGTCTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp TTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTTGCGTTTTTCTGTCATaGCTGTGTACTTGGGAAATC +
Preference number: 4 (lower is better)
Translates to: LRTKGTLSPAIHCWYPVCCVFLS*LCTWEI
Trigger: GATTTCCCAAGTACACAGGCATGACAGAAAAACGCA...ACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTAGCTTGTCCTGCAGTCTaGAGTGGTAGCCCAGTAATT +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVACPAV*SGSPVI
Trigger: AATTACTGGGCTACCACTGCAGACTGCAGGACAAGC...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp GCCTGTGTACTTGGGAAATCTGAAACTGAGTGTCTTAGGAACTTCTTAAAGCAAAAGACTTCCAGTGTGTaGCCTTGGGTCCTGGAAAAG +
Preference number: 4 (lower is better)
Translates to: ACVLGKSETECLRNFLKQKTSSV*PWVLEK
Trigger: CTTTTCCAGGACCCAAGGCCACACACTGGAAGTCTT...TTGCTTTAAGAAGTTCCTAAGACACTCAGTTTCAGATTTCCCAAGTACACAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGTGCCATCGTGCCTCATaGAGATCTTTCGCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQCHRAS*RSFAAG
Trigger: GCCTGCTGCGAAAGATCTCCATGAGGCACGATGGCA...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGAGCCCTCTCTTGATCTaGGTTTCAGTCGGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQSPLLI*VSVGPV
Trigger: CACAGGGCCGACTGAAACCCAGATCAAGAGAGGGCT...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTACATCAAAATCCTTGTaGATGAAGGCAAAACTCCCC +
Preference number: 4 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCTSKSL*MKAKLP
Trigger: GGGGAGTTTTGCCTTCATCCACAAGGATTTTGATGT...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp ATGACTTATCCACTAGATGCAGAAGACACAGTGCCCAAGGCTGACAGTACTGTAACATCAAAATCCTTGTaGATGAAGGCAAAACTCCCC +
Preference number: 4 (lower is better)
Translates to: MTYPLDAEDTVPKADSTVTSKSL*MKAKLP
Trigger: GGGGAGTTTTGCCTTCATCCACAAGGATTTTGATGT...TACAGTACTGTCAGCCTTGGGCACTGTGTCTTCTGCATCTAGTGGATAAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGATCTCATCAAACAGTTTaGGAATTTTCCCCCGAGTCT +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARSHQTV*EFSPES
Trigger: AGACTCGGGGGAAAATTCCCAAACTGTTTGATGAGA...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTTCTCATCAAACAGTTTaGGAATTTTCCCCCGAGTCT +
Preference number: 4 (lower is better)
Translates to: LRTKGTLSPAIHCWYPVCSHQTV*EFSPES
Trigger: AGACTCGGGGGAAAATTCCCAAACTGTTTGATGAGA...ACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AGTGAAGACTTCTACAATGTTAAGATTTCCCCCGCTCGGTTGGAAACCCTGAATAATTCTTGTCAAAGGTaGAGGCAAACTTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: SEDFYNVKISPARLETLNNSCQR*RQTCLH
Trigger: GTGCAGGCAAGTTTGCCTCCACCTTTGACAAGAATT...ATTCAGGGTTTCCAACCGAGCGGGGGAAATCTTAACATTGTAGAAGTCTTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAAATTCTTGTCAAAGGTaGAGGCAAACTTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHENSCQR*RQTCLH
Trigger: GTGCAGGCAAGTTTGCCTCCACCTTTGACAAGAATT...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATCTTCAAGGGCGAGGTaGTCACCCATTTTCTCCATG +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVSSRAR*SPIFSM
Trigger: CATGGAGAAAATGGGTGACCACCTCGCCCTTGAAGA...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGATCATGAAATGAAATaGCCGGTCCACTTTGATGAC +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLDHEMK*PVHFDD
Trigger: GTCATCAAAGTGGACCGGCCATTTCATTTCATGATC...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGATCATGAAATGAAATaGCCGGTCCACTTTGATGAC +
Preference number: 4 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCDHEMK*PVHFDD
Trigger: GTCATCAAAGTGGACCGGCCATTTCATTTCATGATC...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGGATCATGAAATGAAATaGCCGGTCCACTTTGATGAC +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLDHEMK*PVHFDD
Trigger: GTCATCAAAGTGGACCGGCCATTTCATTTCATGATC...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGTTAAGACTCGACACTTaGCCGGGCGTGGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQLRLDT*PGVVAH
Trigger: ATGAGCCACCACGCCCGGCCAAGTGTCGAGTCTTAA...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGAACAGGCTCTTCAGCTaGAGTGGAAGTTTTACAATG +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLNRLFS*SGSFTM
Trigger: CATTGTAAAACTTCCACTCCAGCTGAAGAGCCTGTT...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAAAAGTGTCGACTTCGGTaGAGACAGGGTCAAATGGGG +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMEKCRLR*RQGQMG
Trigger: CCCCATTTGACCCTGTCTTCACCGAAGTCGACACTT...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGGCAGTTTGAGGACATaGCAACGAAAATTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHEGSLRT*QRKFLS
Trigger: TGACAAGAATTTTCGTTGTCATGTCCTCAAACTGCC...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTTTTCTTCATAGATCATaGAATGAAATGGCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: LRTKGTLSPAIHCWYPVCFLHRS*NEMAGP
Trigger: TGGACCGGCCATTTCATTTCATGATCTATGAAGAAA...ACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGTTTCTTCATAGATCATaGAATGAAATGGCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLFLHRS*NEMAGP
Trigger: TGGACCGGCCATTTCATTTCATGATCTATGAAGAAA...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp GCCTGTGTACTTGGGAAATCTGAAACTGAGTGTCTTAGGAACTTCTTAAAGCAAGAACTAGATGATCTGTaGTTCAGCCAATGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: ACVLGKSETECLRNFLKQELDDL*FSQCLC
Trigger: GCAGAGGCATTGGCTGAATCACAGATCATCTAGTTC...TTGCTTTAAGAAGTTCCTAAGACACTCAGTTTCAGATTTCCCAAGTACACAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGCTCGGTTGGAAACCCTaGATTTGTGTGTATGTATTT +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLLGWKP*ICVYVF
Trigger: AAATACATACACACAAATTCAGGGTTTCCAACCGAG...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGTACAGCATATATATGTaGGAACGTGTGGTTGAGTGT +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLYSIYM*ERVVEC
Trigger: ACACTCAACCACACGTTCTCACATATATATGCTGTA...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAATCTTTGAATTGAAATaGAACAGGCTCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARIFELK*NRLFSW
Trigger: CCAGCTGAAGAGCCTGTTTCATTTCAATTCAAAGAT...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGATCTTAGTCTGGAGATaGGTCAGTTTTGCCATACAA +
Preference number: 4 (lower is better)
Translates to: SLKQHAILSSGMESCIVLILVWR*VSFAIQ
Trigger: TTGTATGGCAAAACTGACTCATCTCCAGACTAAGAT...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp ATGACTTATCCACTAGATGCAGAAGACACAGTGCCCAAGGCTGACAGTACTGTAATCTTAGTCTGGAGATaGGTCAGTTTTGCCATACAA +
Preference number: 4 (lower is better)
Translates to: MTYPLDAEDTVPKADSTVILVWR*VSFAIQ
Trigger: TTGTATGGCAAAACTGACTCATCTCCAGACTAAGAT...TACAGTACTGTCAGCCTTGGGCACTGTGTCTTCTGCATCTAGTGGATAAGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTACCATGTTGCCATCGTaGCTCATGGAGATCTTTCGC +
Preference number: 4 (lower is better)
Translates to: KQSKSLKQHAILSSGMESTMLPS*LMEIFR
Trigger: GCGAAAGATCTCCATGAGGCACGATGGCAACATGGT...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAAAGGTGGAGGCAAACTTaGCTGCACCGTACATCATGG +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMERWRQT*LHRTSW
Trigger: CCATGATGTACGGTGCAGGCAAGTTTGCCTCCACCT...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGAGGTGGAGGCAAACTTaGCTGCACCGTACATCATGG +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQRWRQT*LHRTSW
Trigger: CCATGATGTACGGTGCAGGCAAGTTTGCCTCCACCT...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTCCCCTGCCATCCATTaGTGGTATCCTGTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: KQSKSLKQHAILSSGMESSPAIH*WYPVCV
Trigger: AACACACACAGGATACCAGCAATGGATGGCAGGGGA...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAAAGGAACACTCTCCCCTaGCATCCATTGCTGGTATCC +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMERNTLP*HPLLVS
Trigger: GGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCT...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTCCTTATCCATGGTTTTaGTTTCTGCAGTCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCPYPWF*FLQSQL
Trigger: TAACTGAGACTGCAGAAAGCAAAACCATGGATAAGG...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGCCCATGAAGGTGTTTTaGTTATTGCCATATGCTAGA +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLPMKVF*LLPYAR
Trigger: TCTAGCATATGGCAATAAGCAAAACACCTTCATGGG...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAGTGACAGAAAATAACTaGCTAAGGAAGATCAGGGAT +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARVTENN*LRKIRD
Trigger: ATCCCTGATCTTCCTTAGGCAGTTATTTTCTGTCAC...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAATGCGTTTTTCTGTCATaGCTGTGTACTTGGGAAATC +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHECVFLS*LCTWEI
Trigger: GATTTCCCAAGTACACAGGCATGACAGAAAAACGCA...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAAGTGCCTCCCTTCAGCTaGAAGACTTCCTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMEVPPFS*KTSFLF
Trigger: GAACAGGAAGGAAGTCTTGCAGCTGAAGGGAGGCAC...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTACAAGGACATGCCAAATaGAGAGAAGACCATGTTGCC +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVQGHAK*REDHVA
Trigger: GGCAACATGGTCTTCTCTCCATTTGGCATGTCCTTG...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AGTGAAGACTTCTACAATGTTAAGATTTCCCCCGCTCGGTTGGAAACCCTGAATACATCAAAATCCTTGTaGATGAAGGCAAAACTCCCC +
Preference number: 4 (lower is better)
Translates to: SEDFYNVKISPARLETLNTSKSL*MKAKLP
Trigger: GGGGAGTTTTGCCTTCATCCACAAGGATTTTGATGT...ATTCAGGGTTTCCAACCGAGCGGGGGAAATCTTAACATTGTAGAAGTCTTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAATCTCATCAAACAGTTTaGGAATTTTCCCCCGAGTCT +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHESHQTV*EFSPES
Trigger: AGACTCGGGGGAAAATTCCCAAACTGTTTGATGAGA...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTTCACCCTGGGACAAAGTTCATGCTTATATTCTGTTTAACCCCCATGGGTAGCTCTCATCAAACAGTTTaGGAATTTTCCCCCGAGTCT +
Preference number: 4 (lower is better)
Translates to: FHPGTKFMLIFCLTPMGSSHQTV*EFSPES
Trigger: AGACTCGGGGGAAAATTCCCAAACTGTTTGATGAGA...GCTACCCATGGGGGTTAAACAGAATATAAGCATGAACTTTGTCCCAGGGTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGTACTTGTCCAGGTaGAAAGTGTCGACTTCGGTG +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVLYLSR*KVSTSV
Trigger: CACCGAAGTCGACACTTTCCACCTGGACAAGTACAA...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGAAAACCCTGGATACTTaGAGATTTCTTCCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLKTLDT*RFLPVA
Trigger: AGCTACTGGAAGAAATCTCCAAGTATCCAGGGTTTT...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTTCTTTGTAAAACCCTaGATACTTGGAGATTTCTTC +
Preference number: 4 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNFFVKP*ILGDFF
Trigger: GAAGAAATCTCCAAGTATCCAGGGTTTTACAAAGAA...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AGTGAAGACTTCTACAATGTTAAGATTTCCCCCGCTCGGTTGGAAACCCTGAATATATGGACCTGTTTCTaGGTCCCTCTTTCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: SEDFYNVKISPARLETLNIWTCF*VPLSFL
Trigger: AAGGAAAGAAAGAGGGACCCAGAAACAGGTCCATAT...ATTCAGGGTTTCCAACCGAGCGGGGGAAATCTTAACATTGTAGAAGTCTTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp TTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTAGTGGGAAATTGGACTaGATGCTACTTTATTCCTCT +
Preference number: 4 (lower is better)
Translates to: LRTKGTLSPAIHCWYPVCSGKLD*MLLYSS
Trigger: AGAGGAATAAAGTAGCATCCAGTCCAATTTCCCACT...ACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp ATGACTTATCCACTAGATGCAGAAGACACAGTGCCCAAGGCTGACAGTACTGTAAGTGGGAAATTGGACTaGATGCTACTTTATTCCTCT +
Preference number: 4 (lower is better)
Translates to: MTYPLDAEDTVPKADSTVSGKLD*MLLYSS
Trigger: AGAGGAATAAAGTAGCATCCAGTCCAATTTCCCACT...TACAGTACTGTCAGCCTTGGGCACTGTGTCTTCTGCATCTAGTGGATAAGTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTGCTTTGCAGTGTATGTaGTGGGAAGAAGGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: KQSKSLKQHAILSSGMESALQCM*WEEGRS
Trigger: ACTCCTGCCTTCTTCCCACCACATACACTGCAAAGC...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp TTTCACCCTGGGACAAAGTTCATGCTTATATTCTGTTTAACCCCCATGGGTAGCAACAGGCTCTTCAGCTaGAGTGGAAGTTTTACAATG +
Preference number: 4 (lower is better)
Translates to: FHPGTKFMLIFCLTPMGSNRLFS*SGSFTM
Trigger: CATTGTAAAACTTCCACTCCAGCTGAAGAGCCTGTT...GCTACCCATGGGGGTTAAACAGAATATAAGCATGAACTTTGTCCCAGGGTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATACTCCGGCAGTGAGTaGTGGTGGGTGAAATATCAA +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVYSGSE*WWVKYQ
Trigger: TTGATATTTCACCCACCACCACTCACTGCCGGAGTA...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR TCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAAGCTGAATCCGAAGTTTaGAGTCTCCTTGGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMEAESEV*SLLGKL
Trigger: CAGCTTGCCAAGGAGACTTCAAACTTCGGATTCAGC...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTCTTTCGCAGCAGGCTaGATCCGAAGTTTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: KQSKSLKQHAILSSGMESSFAAG*IRSLKS
Trigger: AGACTTCAAACTTCGGATTCAGCCTGCTGCGAAAGA...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTTCAACCATTTCCCTTTaGACAAGATGTAATCCACAA +
Preference number: 4 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCSTISL*TRCNPQ
Trigger: TTGTGGATTACATCTTGTTCAAAGGGAAATGGTTGA...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTACTTGGTAGGGCAGTTTaGGGACATGACAACGAAAAT +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVLGRAV*GHDNEN
Trigger: ATTTTCGTTGTCATGTCCTCAAACTGCCCTACCAAG...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTACTTCTGATCTAGCTTaGACTTCGGAAAGAAAACTT +
Preference number: 4 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCTSDLA*TSERKL
Trigger: AAGTTTTCTTTCCGAAGTTCAAGCTAGATCAGAAGT...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAACTTCTGATCTAGCTTaGACTTCGGAAAGAAAACTT +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARTSDLA*TSERKL
Trigger: AAGTTTTCTTTCCGAAGTTCAAGCTAGATCAGAAGT...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTAATTTCTTCCAGTAGCTaGGAGTTCACTAAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVISSSS*EFTKVS
Trigger: GCTGACCTTAGTGAACTCTCAGCTACTGGAAGAAAT...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TTTCACCCTGGGACAAAGTTCATGCTTATATTCTGTTTAACCCCCATGGGTAGCTTTCTTCATAGATCATaGAATGAAATGGCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: FHPGTKFMLIFCLTPMGSFLHRS*NEMAGP
Trigger: TGGACCGGCCATTTCATTTCATGATCTATGAAGAAA...GCTACCCATGGGGGTTAAACAGAATATAAGCATGAACTTTGTCCCAGGGTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATGCTTATGCGTGTCCTaGATTATAGGAGAGTCGGAT +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVCLCVS*IIGESD
Trigger: ATCCGACTCTCCTATAATTCAGGACACGCATAAGCA...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTCTTCTGATTCCCATCTaGCTAAGCAGCTCATGCATC +
Preference number: 4 (lower is better)
Translates to: KQSKSLKQHAILSSGMESLLIPI*LSSSCI
Trigger: GATGCATGAGCTGCTTAGGCAGATGGGAATCAGAAG...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCCCCTGCCATCCATTaGTGGTATCCTGTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMESPAIH*WYPVCV
Trigger: AACACACACAGGATACCAGCAATGGATGGCAGGGGA...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGTGAATTCTCCCCTTaGCCAATGTCTCCACACTGT +
Preference number: 4 (lower is better)
Translates to: KQSKSLKQHAILSSGMESCEFSP*PMSPHC
Trigger: ACAGTGTGGAGACATTGGGCAAGGGGAGAATTCACA...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAAAGTGGGATGGAATCTTaGATTGTCCTGCTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMESGMES*IVLLCP
Trigger: GGGACAGAGCAGGACAATGCAAGATTCCATCCCACT...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAACCTTATCCATGGTTTTaGTTTCTGCAGTCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHEPYPWF*FLQSQL
Trigger: TAACTGAGACTGCAGAAAGCAAAACCATGGATAAGG...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AGTGAAGACTTCTACAATGTTAAGATTTCCCCCGCTCGGTTGGAAACCCTGAATCCTTATCCATGGTTTTaGTTTCTGCAGTCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: SEDFYNVKISPARLETLNPYPWF*FLQSQL
Trigger: TAACTGAGACTGCAGAAAGCAAAACCATGGATAAGG...ATTCAGGGTTTCCAACCGAGCGGGGGAAATCTTAACATTGTAGAAGTCTTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTCCCATGAAGGTGTTTTaGTTATTGCCATATGCTAGA +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLPMKVF*LLPYAR
Trigger: TCTAGCATATGGCAATAAGCAAAACACCTTCATGGG...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGACAGAAAATAACTaGCTAAGGAAGATCAGGGAT +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHEVTENN*LRKIRD
Trigger: ATCCCTGATCTTCCTTAGGCAGTTATTTTCTGTCAC...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTCAAGGACATGCCAAATaGAGAGAAGACCATGTTGCC +
Preference number: 4 (lower is better)
Translates to: KQSKSLKQHAILSSGMESQGHAK*REDHVA
Trigger: GGCAACATGGTCTTCTCTCCATTTGGCATGTCCTTG...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAAGCATCAAGCCTGTCATaGCCAAGGACATGCCAAATG +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMEASSLS*PRTCQM
Trigger: CATTTGGCATGTCCTTGGCCATGACAGGCTTGATGC...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTTGTACTTGTCCAGGTaGAAAGTGTCGACTTCGGTG +
Preference number: 4 (lower is better)
Translates to: KQSKSLKQHAILSSGMESLYLSR*KVSTSV
Trigger: CACCGAAGTCGACACTTTCCACCTGGACAAGTACAA...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTAAATTCTTGTCAAAGGTaGAGGCAAACTTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVNSCQR*RQTCLH
Trigger: GTGCAGGCAAGTTTGCCTCCACCTTTGACAAGAATT...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp CTAAGGAAGATCAGGGATATTTACGATTTTCCTTTTCACCCTGGGACAAAGTTCAATTCTTGTCAAAGGTaGAGGCAAACTTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: LRKIRDIYDFPFHPGTKFNSCQR*RQTCLH
Trigger: GTGCAGGCAAGTTTGCCTCCACCTTTGACAAGAATT...GAACTTTGTCCCAGGGTGAAAAGGAAAATCGTAAATATCCCTGATCTTCCTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTCAAGGGCGAGGTaGTCACCCATTTTCTCCATG +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMESSRAR*SPIFSM
Trigger: CATGGAGAAAATGGGTGACCACCTCGCCCTTGAAGA...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTCCACCAAGTCTGTaGTCAGGTAGTCTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMESPPSL*SGSLQG
Trigger: CCCTTGAAGACTACCTGACCACAGACTTGGTGGAGA...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAAAAACCCTGGATACTTaGAGATTTCTTCCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHEKTLDT*RFLPVA
Trigger: AGCTACTGGAAGAAATCTCCAAGTATCCAGGGTTTT...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTTCCCCCTCAGATAAGTaGGGACTACTGTATTTATTT +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLSPSDK*GLLYLF
Trigger: AAATAAATACAGTAGTCCCCACTTATCTGAGGGGGA...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp ATGACTTATCCACTAGATGCAGAAGACACAGTGCCCAAGGCTGACAGTACTGTATTTTCCTTTTCACCCTaGGACAAAGTTCATGCTTAT +
Preference number: 4 (lower is better)
Translates to: MTYPLDAEDTVPKADSTVFSFSP*DKVHAY
Trigger: ATAAGCATGAACTTTGTCCCAGGGTGAAAAGGAAAA...TACAGTACTGTCAGCCTTGGGCACTGTGTCTTCTGCATCTAGTGGATAAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTGGCAGTGAGTGGTGGTaGGTGAAATATCAAGCCTTT +
Preference number: 4 (lower is better)
Translates to: KQSKSLKQHAILSSGMESGSEWW*VKYQAF
Trigger: AAAGGCTTGATATTTCACCCACCACCACTCACTGCC...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR TCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTTCGCAGCAGGCTaGATCCGAAGTTTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMESFAAG*IRSLKS
Trigger: AGACTTCAAACTTCGGATTCAGCCTGCTGCGAAAGA...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTTCAACCATTTCCCTTTaGACAAGATGTAATCCACAA +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLSTISL*TRCNPQ
Trigger: TTGTGGATTACATCTTGTTCAAAGGGAAATGGTTGA...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAATCAACCATTTCCCTTTaGACAAGATGTAATCCACAA +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHESTISL*TRCNPQ
Trigger: TTGTGGATTACATCTTGTTCAAAGGGAAATGGTTGA...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp GCCTGTGTACTTGGGAAATCTGAAACTGAGTGTCTTAGGAACTTCTTAAAGCAAGGCAGTTTGAGGACATaGCAACGAAAATTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: ACVLGKSETECLRNFLKQGSLRT*QRKFLS
Trigger: TGACAAGAATTTTCGTTGTCATGTCCTCAAACTGCC...TTGCTTTAAGAAGTTCCTAAGACACTCAGTTTCAGATTTCCCAAGTACACAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTAGGCAGTTTGAGGACATaGCAACGAAAATTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVGSLRT*QRKFLS
Trigger: TGACAAGAATTTTCGTTGTCATGTCCTCAAACTGCC...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAACTTCTGATCTAGCTTaGACTTCGGAAAGAAAACTT +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHETSDLA*TSERKL
Trigger: AAGTTTTCTTTCCGAAGTTCAAGCTAGATCAGAAGT...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTACTTCTGATCTAGCTTaGACTTCGGAAAGAAAACTT +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLTSDLA*TSERKL
Trigger: AAGTTTTCTTTCCGAAGTTCAAGCTAGATCAGAAGT...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTATTTCTTCCAGTAGCTaGGAGTTCACTAAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: KQSKSLKQHAILSSGMESISSSS*EFTKVS
Trigger: GCTGACCTTAGTGAACTCTCAGCTACTGGAAGAAAT...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAACATATATATCTTCATaGAGGAAGGAGGAGTCTACA +
Preference number: 4 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHETYISS*RKEEST
Trigger: TGTAGACTCCTCCTTCCTTCATGAAGATATATATGT...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTACATATATATCTTCATaGAGGAAGGAGGAGTCTACA +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLTYISS*RKEEST
Trigger: TGTAGACTCCTCCTTCCTTCATGAAGATATATATGT...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGTCATGGCCAAGGACATaGCAAATGGAGAGAAGACCA +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQSWPRT*QMERRP
Trigger: TGGTCTTCTCTCCATTTGGCATGTCCTTGGCCATGA...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGCTTCTGATTCCCATCTaGCTAAGCAGCTCATGCATC +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQLLIPI*LSSSCI
Trigger: GATGCATGAGCTGCTTAGGCAGATGGGAATCAGAAG...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGATGGTATTGCAGTGCTTaGATTCAAGTAACTCATTTT +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTARWYCSA*IQVTHF
Trigger: AAAATGAGTTACTTGAATGCAAGCACTGCAATACCA...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAGAGATGAGTCAGTTTTaGCATACAATTAGTGGATAT +
Preference number: 4 (lower is better)
Translates to: AGILCVFDTSDSASTTAREMSQF*HTISGY
Trigger: ATATCCACTAATTGTATGGCAAAACTGACTCATCTC...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGCAAGGACATGCCAAATaGAGAGAAGACCATGTTGCC +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQQGHAK*REDHVA
Trigger: GGCAACATGGTCTTCTCTCCATTTGGCATGTCCTTG...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTTTCTTTGTAAAACCCTaGATACTTGGAGATTTCTTC +
Preference number: 4 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCFFVKP*ILGDFF
Trigger: GAAGAAATCTCCAAGTATCCAGGGTTTTACAAAGAA...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGTTCTTTGTAAAACCCTaGATACTTGGAGATTTCTTC +
Preference number: 4 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLFFVKP*ILGDFF
Trigger: GAAGAAATCTCCAAGTATCCAGGGTTTTACAAAGAA...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TTTCACCCTGGGACAAAGTTCATGCTTATATTCTGTTTAACCCCCATGGGTAGCTTTTCCTTTTCACCCTaGGACAAAGTTCATGCTTAT +
Preference number: 4 (lower is better)
Translates to: FHPGTKFMLIFCLTPMGSFSFSP*DKVHAY
Trigger: ATAAGCATGAACTTTGTCCCAGGGTGAAAAGGAAAA...GCTACCCATGGGGGTTAAACAGAATATAAGCATGAACTTTGTCCCAGGGTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp AGTGAAGACTTCTACAATGTTAAGATTTCCCCCGCTCGGTTGGAAACCCTGAATCATCAGTCCAGGTTATaGAATGATGAAAAGTCAGTA +
Preference number: 4 (lower is better)
Translates to: SEDFYNVKISPARLETLNHQSRL*NDEKSV
Trigger: TACTGACTTTTCATCATTCCATAACCTGGACTGATG...ATTCAGGGTTTCCAACCGAGCGGGGGAAATCTTAACATTGTAGAAGTCTTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGTGGTTTTCATGTTTCTaGGCCATGTCTCCACCAAGT +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQWFSCF*AMSPPS
Trigger: ACTTGGTGGAGACATGGCTCAGAAACATGAAAACCA...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGATTTCTTCCAGTAGCTaGGAGTTCACTAAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQISSSS*EFTKVS
Trigger: GCTGACCTTAGTGAACTCTCAGCTACTGGAAGAAAT...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp GCCTGTGTACTTGGGAAATCTGAAACTGAGTGTCTTAGGAACTTCTTAAAGCAATTTCTTCATAGATCATaGAATGAAATGGCCGGTCCA +
Preference number: 4 (lower is better)
Translates to: ACVLGKSETECLRNFLKQFLHRS*NEMAGP
Trigger: TGGACCGGCCATTTCATTTCATGATCTATGAAGAAA...TTGCTTTAAGAAGTTCCTAAGACACTCAGTTTCAGATTTCCCAAGTACACAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGTGCTTATGCGTGTCCTaGATTATAGGAGAGTCGGAT +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQCLCVS*IIGESD
Trigger: ATCCGACTCTCCTATAATTCAGGACACGCATAAGCA...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp CTAAGGAAGATCAGGGATATTTACGATTTTCCTTTTCACCCTGGGACAAAGTTCCTCGGTTGGAAACCCTaGATTTGTGTGTATGTATTT +
Preference number: 4 (lower is better)
Translates to: LRKIRDIYDFPFHPGTKFLGWKP*ICVYVF
Trigger: AAATACATACACACAAATTCAGGGTTTCCAACCGAG...GAACTTTGTCCCAGGGTGAAAAGGAAAATCGTAAATATCCCTGATCTTCCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTTGGTATTGCAGTGCTTaGATTCAAGTAACTCATTTT +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLWYCSA*IQVTHF
Trigger: AAAATGAGTTACTTGAATGCAAGCACTGCAATACCA...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGGAAGACAGGGTCAAATaGGGTCAACCATTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQEDRVK*GQPFPF
Trigger: AAAGGGAAATGGTTGACCCCATTTGACCCTGTCTTC...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAAGAAGACAGGGTCAAATaGGGTCAACCATTTCCCTTT +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMEEDRVK*GQPFPF
Trigger: AAAGGGAAATGGTTGACCCCATTTGACCCTGTCTTC...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAAAATTCTTGTCAAAGGTaGAGGCAAACTTGCCTGCAC +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMENSCQR*RQTCLH
Trigger: GTGCAGGCAAGTTTGCCTCCACCTTTGACAAGAATT...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp GCCTGTGTACTTGGGAAATCTGAAACTGAGTGTCTTAGGAACTTCTTAAAGCAAAAAACCCTGGATACTTaGAGATTTCTTCCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: ACVLGKSETECLRNFLKQKTLDT*RFLPVA
Trigger: AGCTACTGGAAGAAATCTCCAAGTATCCAGGGTTTT...TTGCTTTAAGAAGTTCCTAAGACACTCAGTTTCAGATTTCCCAAGTACACAGGC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CCA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTTTCTTTGTAAAACCCTaGATACTTGGAGATTTCTTC +
Preference number: 4 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLFFVKP*ILGDFF
Trigger: GAAGAAATCTCCAAGTATCCAGGGTTTTACAAAGAA...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTATATGGACCTGTTTCTaGGTCCCTCTTTCTTTCCTT +
Preference number: 4 (lower is better)
Translates to: KQSKSLKQHAILSSGMESIWTCF*VPLSFL
Trigger: AAGGAAAGAAAGAGGGACCCAGAAACAGGTCCATAT...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR CAA 72 bp TTTATTGGTCTGCGTTTTTCTGTCATGCCTGTGTACTaGGGAAATCTGAAACTGAGTGTCTTAGGAACTTCT +
Preference number: 4 (lower is better)
Translates to: FIGLRFSVMPVY*GNLKLSVLGTS
Trigger: AGAAGTTCCTAAGACACTCAGTTTCAGATTTCCCAAGTACACAGGCATGACAGAAAAACGCAGACCAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAACCAAAGGCTTTATCTTaGCATAGTGTTCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMEPKALS*HSVLIC
Trigger: GCAGATGAGAACACTATGTCAAGATAAAGCCTTTGG...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTCCTTATCCATGGTTTTaGTTTCTGCAGTCTCAGTTA +
Preference number: 4 (lower is better)
Translates to: KQSKSLKQHAILSSGMESPYPWF*FLQSQL
Trigger: TAACTGAGACTGCAGAAAGCAAAACCATGGATAAGG...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGACATCAAAATCCTTGTaGATGAAGGCAAAACTCCCC +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQTSKSL*MKAKLP
Trigger: GGGGAGTTTTGCCTTCATCCACAAGGATTTTGATGT...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTCATCAAACAGTTTaGGAATTTTCCCCCGAGTCT +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMESHQTV*EFSPES
Trigger: AGACTCGGGGGAAAATTCCCAAACTGTTTGATGAGA...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTAAAACCCTGGATACTTaGAGATTTCTTCCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: KQSKSLKQHAILSSGMESKTLDT*RFLPVA
Trigger: AGCTACTGGAAGAAATCTCCAAGTATCCAGGGTTTT...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTACATCAGTCCAGGTTATaGAATGATGAAAAGTCAGTA +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVHQSRL*NDEKSV
Trigger: TACTGACTTTTCATCATTCCATAACCTGGACTGATG...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR GCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATGGTATTGCAGTGCTTaGATTCAAGTAACTCATTTT +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVWYCSA*IQVTHF
Trigger: AAAATGAGTTACTTGAATGCAAGCACTGCAATACCA...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAAAAAACCCTGGATACTTaGAGATTTCTTCCAGTAGCT +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMEKTLDT*RFLPVA
Trigger: AGCTACTGGAAGAAATCTCCAAGTATCCAGGGTTTT...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTCTTTGTAAAACCCTaGATACTTGGAGATTTCTTC +
Preference number: 4 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVFFVKP*ILGDFF
Trigger: GAAGAAATCTCCAAGTATCCAGGGTTTTACAAAGAA...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGTCCCCCTCAGATAAGTaGGGACTACTGTATTTATTT +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQSPSDK*GLLYLF
Trigger: AAATAAATACAGTAGTCCCCACTTATCTGAGGGGGA...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATGCTGTGATCAGGACTaGTTAGAGCTATTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMECCDQD*LELFSS
Trigger: AGAAGAAAATAGCTCTAACCAGTCCTGATCACAGCA...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR TCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCAACCATTTCCCTTTaGACAAGATGTAATCCACAA +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMESTISL*TRCNPQ
Trigger: TTGTGGATTACATCTTGTTCAAAGGGAAATGGTTGA...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR TCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGACTTCTGATCTAGCTTaGACTTCGGAAAGAAAACTT +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQTSDLA*TSERKL
Trigger: AAGTTTTCTTTCCGAAGTTCAAGCTAGATCAGAAGT...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATGGTATTGCAGTGCTTaGATTCAAGTAACTCATTTT +
Preference number: 4 (lower is better)
Translates to: NKQSKSLKQHAILSSGMEWYCSA*IQVTHF
Trigger: AAAATGAGTTACTTGAATGCAAGCACTGCAATACCA...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR GCA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGGAGATGAGTCAGTTTTaGCATACAATTAGTGGATAT +
Preference number: 4 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQEMSQF*HTISGY
Trigger: ATATCCACTAATTGTATGGCAAAACTGACTCATCTC...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
3UTR CAA 72 bp GTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATaGCAGTGCTTGCATTCAAGTAACTCATTTTACTTA +
Preference number: 4 (lower is better)
Translates to: VAFSIISLTVMV*QCLHSSNSFYL
Trigger: TAAGTAAAATGAGTTACTTGAATGCAAGCACTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS CCA 90 bp CTCCTTGGGAGCCTGCACTACCCTGCTGGTCTGGTTCTGAGGGGCTaGGGTCTCTGGCGACTGAGGACTGGGGGCCAAGCCGGGTACCAG +
Preference number: 5 (lower is better)
Translates to: LLGSLHYPAGLVLRG*GLWRLRTGGQAGYQ
Trigger: CTGGTACCCGGCTTGGCCCCCAGTCCTCAGTCGCCAGAGACCCCAGCCCCTCAGAACCAGACCAGCAGGGTAGTGCAGGCTCCCAAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS GCA 90 bp TGGCGACTGAGGACTGGGGGCCAAGCCGGGTACCAGCCACACCTGTaGCAGGAGGACGGAGAGCAGGAGACTTGGCACCACCTTCATGTG +
Preference number: 5 (lower is better)
Translates to: WRLRTGGQAGYQPHL*QEDGEQETWHHLHV
Trigger: CACATGAAGGTGGTGCCAAGTCTCCTGCTCTCCGTCCTCCTGGCACAGGTGTGGCTGGTACCCGGCTTGGCCCCCAGTCCTCAGTCGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS GCA 90 bp ACCAGCTCACCTGCCACTTCTCAGCCCTGGGACAGCACACATCCCTaGCTCCCCTCAGCCCTGGGAAGGGGAGACCTGCTTACTCCGGCA +
Preference number: 5 (lower is better)
Translates to: TSSPATSQPWDSTHP*LPSALGRGDLLTPA
Trigger: TGCCGGAGTAAGCAGGTCTCCCCTTCCCAGGGCTGAGGGGAGGCAGGGATGTGTGCTGTCCCAGGGCTGAGAAGTGGCAGGTGAGCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS CCA 90 bp GGGTACCAGCCACACCTGTGCCAGGAGGACGGAGAGCAGGAGACTTaGCACCACCTTCATGTGATCGGCTGCGGAGGCCAAGGAGTGCCT +
Preference number: 5 (lower is better)
Translates to: GYQPHLCQEDGEQET*HHLHVIGCGGQGVP
Trigger: AGGCACTCCTTGGCCTCCGCAGCCGATCACATGAAGGTGGTGCCAAGTCTCCTGCTCTCCGTCCTCCTGGCACAGGTGTGGCTGGTACCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCGGCAGGAGCCCGGGCTaGGTGGGCTTCAGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPGRSPG*VGFRAC
Trigger: GCAGGCCCTGAAGCCCACCAAGCCCGGGCTCCTGCC...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS TCA 90 bp TGTGCCAGGAGGACGGAGAGCAGGAGACTTGGCACCACCTTCATGTaGTCGGCTGCGGAGGCCAAGGAGTGCCTCCCTTCAGCTGCAAGA +
Preference number: 5 (lower is better)
Translates to: CARRTESRRLGTTFM*SAAEAKECLPSAAR
Trigger: TCTTGCAGCTGAAGGGAGGCACTCCTTGGCCTCCGCAGCCGATCACATGAAGGTGGTGCCAAGTCTCCTGCTCTCCGTCCTCCTGGCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TTGGAGACTAGACTCAGGAAAGGTAGGCTTCTGACTCTGCCATTGCCACACTGGGGCAGGAGCCCGGGCTaGGTGGGCTTCAGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: LETRLRKGRLLTLPLPHWGRSPG*VGFRAC
Trigger: GCAGGCCCTGAAGCCCACCAAGCCCGGGCTCCTGCC...CCAGTGTGGCAATGGCAGAGTCAGAAGCCTACCTTTCCTGAGTCTAGTCTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS GCA 90 bp GAGGACGGAGAGCAGGAGACTTGGCACCACCTTCATGTGATCGGCTaGGGAGGCCAAGGAGTGCCTCCCTTCAGCTGCAAGACTTCCAGT +
Preference number: 5 (lower is better)
Translates to: EDGEQETWHHLHVIG*GGQGVPPFSCKTSS
Trigger: ACTGGAAGTCTTGCAGCTGAAGGGAGGCACTCCTTGGCCTCCGCAGCCGATCACATGAAGGTGGTGCCAAGTCTCCTGCTCTCCGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS GCA 90 bp GAGGACGGAGAGCAGGAGACTTGGCACCACCTTCATGTGATCGGCTaGGGAGGCCAAGGAGTGCCTCCCTTCAGCTGCAAGACTTCCTTC +
Preference number: 5 (lower is better)
Translates to: EDGEQETWHHLHVIG*GGQGVPPFSCKTSF
Trigger: GAAGGAAGTCTTGCAGCTGAAGGGAGGCACTCCTTGGCCTCCGCAGCCGATCACATGAAGGTGGTGCCAAGTCTCCTGCTCTCCGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS GCA 90 bp GAGGACGGAGAGCAGGAGACTTGGCACCACCTTCATGTGATCGGCTaGGGAGGCCAAGGAGTGCCTCCCTTCAGCTGCAAGACTTCCTGT +
Preference number: 5 (lower is better)
Translates to: EDGEQETWHHLHVIG*GGQGVPPFSCKTSC
Trigger: ACAGGAAGTCTTGCAGCTGAAGGGAGGCACTCCTTGGCCTCCGCAGCCGATCACATGAAGGTGGTGCCAAGTCTCCTGCTCTCCGTCCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554173.1
CDS TCA 90 bp GCCTCCCCTCAGCCCTGGGAAGGGGAGACCTGCTTACTCCGGCAGTaGGTGGTGGTGGGTGAAATATCAAGCCTTTCAAGCCTCTTTCCC +
Preference number: 5 (lower is better)
Translates to: ASPQPWEGETCLLRQ*VVVGEISSLSSLFP
Trigger: GGGAAAGAGGCTTGAAAGGCTTGATATTTCACCCACCACCACTCACTGCCGGAGTAAGCAGGTCTCCCCTTCCCAGGGCTGAGGGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS GCA 90 bp CTCATCTACCCAACCCTTTGGAGTCTAGGCCAGGAGCTCAGGGGGTaGTCCTGGACTAGGACACCATCCAGCATGGTGAGGACGCACCTT +
Preference number: 5 (lower is better)
Translates to: LIYPTLWSLGQELRG*SWTRTPSSMVRTHL
Trigger: AAGGTGCGTCCTCACCATGCTGGATGGTGTCCTAGTCCAGGAGCACCCCCTGAGCTCCTGGCCTAGACTCCAAAGGGTTGGGTAGATGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS CCA 90 bp TACCCAACCCTTTGGAGTCTAGGCCAGGAGCTCAGGGGGTGCTCCTaGACTAGGACACCATCCAGCATGGTGAGGACGCACCTTCCTAGA +
Preference number: 5 (lower is better)
Translates to: YPTLWSLGQELRGCS*TRTPSSMVRTHLPR
Trigger: TCTAGGAAGGTGCGTCCTCACCATGCTGGATGGTGTCCTAGTCCAGGAGCACCCCCTGAGCTCCTGGCCTAGACTCCAAAGGGTTGGGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS TCA 90 bp AGGAGCTCAGGGGGTGCTCCTGGACTAGGACACCATCCAGCATGGTaGGGACGCACCTTCCTAGACAGAACCTGGGCAGTAAGGAATCAC +
Preference number: 5 (lower is better)
Translates to: RSSGGAPGLGHHPAW*GRTFLDRTWAVRNH
Trigger: GTGATTCCTTACTGCCCAGGTTCTGTCTAGGAAGGTGCGTCCTCACCATGCTGGATGGTGTCCTAGTCCAGGAGCACCCCCTGAGCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS CCA 90 bp CCCCTCAGCCCTGGGAAGGGGAGACCTGCTTACTCCGGCAGTGAGTaGTGGTGGGTGAAATATCAAGCCTTTCAAGCCTCTTTCCCTTGG +
Preference number: 5 (lower is better)
Translates to: PLSPGKGRPAYSGSE*WWVKYQAFQASFPW
Trigger: CCAAGGGAAAGAGGCTTGAAAGGCTTGATATTTCACCCACCACCACTCACTGCCGGAGTAAGCAGGTCTCCCCTTCCCAGGGCTGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CAA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGGCAGGAGCCCGGGCTaGGTGGGCTTCAGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLGRSPG*VGFRAC
Trigger: GCAGGCCCTGAAGCCCACCAAGCCCGGGCTCCTGCC...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAGGCAGGAGCCCGGGCTaGGTGGGCTTCAGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: AGILCVFDTSDSASTTARGRSPG*VGFRAC
Trigger: GCAGGCCCTGAAGCCCACCAAGCCCGGGCTCCTGCC...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCAGGCCCAGTTCCAGGTaGCGGGAGAGGGTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPRPSSR*RERVSL
Trigger: CAGAGAGACCCTCTCCCGCAACCTGGAACTGGGCCT...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS GCA 90 bp TTTCGCAGCAGGCTGAATCCGAAGTTTGAAGTCTCCTTGGCAAGCTaGTGCCTGCTGGCCATCAGCCAGGCTTTCTCTTCCTCACTGGCC +
Preference number: 5 (lower is better)
Translates to: FRSRLNPKFEVSLAS*CLLAISQAFSSSLA
Trigger: GGCCAGTGAGGAAGAGAAAGCCTGGCTGATGGCCAGCAGGCAGCAGCTTGCCAAGGAGACTTCAAACTTCGGATTCAGCCTGCTGCGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS CCA 90 bp TCTGGGTTTCAGTCGGCCCTGTGGCCCCCAGCATCAAGCCTGTCATaGCCAAGGACATGCCAAATGGAGAGAAGACCATGTTGCCATCGT +
Preference number: 5 (lower is better)
Translates to: SGFQSALWPPASSLS*PRTCQMERRPCCHR
Trigger: ACGATGGCAACATGGTCTTCTCTCCATTTGGCATGTCCTTGGCCATGACAGGCTTGATGCTGGGGGCCACAGGGCCGACTGAAACCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS CCA 90 bp AGCCCTGGGAAGGGGAGACCTGCTTACTCCGGCAGTGAGTGGTGGTaGGTGAAATATCAAGCCTTTCAAGCCTCTTTCCCTTGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: SPGKGRPAYSGSEWW*VKYQAFQASFPWPP
Trigger: AGGAGGCCAAGGGAAAGAGGCTTGAAAGGCTTGATATTTCACCCACCACCACTCACTGCCGGAGTAAGCAGGTCTCCCCTTCCCAGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS CCA 90 bp CTCAGCCCTGGGAAGGGGAGACCTGCTTACTCCGGCAGTGAGTGGTaGTGGGTGAAATATCAAGCCTTTCAAGCCTCTTTCCCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: LSPGKGRPAYSGSEW*WVKYQAFQASFPWP
Trigger: AGGCCAAGGGAAAGAGGCTTGAAAGGCTTGATATTTCACCCACCACCACTCACTGCCGGAGTAAGCAGGTCTCCCCTTCCCAGGGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS CCA 90 bp GCCTCTTACCCCACTCCAGCTCCCAATCTGTATGTACAGTCCCTGTaGAGTGTAGGATGGAGGTCTTTGCACTGCTCAGCCACACAGCCC +
Preference number: 5 (lower is better)
Translates to: ASYPTPAPNLYVQSL*SVGWRSLHCSATQP
Trigger: GGGCTGTGTGGCTGAGCAGTGCAAAGACCTCCATCCTACACTCCACAGGGACTGTACATACAGATTGGGAGCTGGAGTGGGGTAAGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554723.5
ENST00000616057.2
CDS TCA 90 bp CTGGGAAGGGGAGACCTGCTTACTCCGGCAGTGAGTGGTGGTGGGTaGAATATCAAGCCTTTCAAGCCTCTTTCCCTTGGCCTCCTTCCT +
Preference number: 5 (lower is better)
Translates to: LGRGDLLTPAVSGGG*NIKPFKPLSLGLLP
Trigger: AGGAAGGAGGCCAAGGGAAAGAGGCTTGAAAGGCTTGATATTTCACCCACCACCACTCACTGCCGGAGTAAGCAGGTCTCCCCTTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS TCA 90 bp AGACCATGTTGCCATCGTGCCTCATGGAGATCTTTCGCAGCAGGCTaGATCCGAAGTTTGAAGTCTCCTTGGCAAGCTGCTGCCTGCTGG +
Preference number: 5 (lower is better)
Translates to: RPCCHRASWRSFAAG*IRSLKSPWQAAACW
Trigger: CCAGCAGGCAGCAGCTTGCCAAGGAGACTTCAAACTTCGGATTCAGCCTGCTGCGAAAGATCTCCATGAGGCACGATGGCAACATGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGCGGAGAGCAGGAGACTaGGCACCACCTTCATGTGAT +
Preference number: 5 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMRRAGD*APPSCD
Trigger: ATCACATGAAGGTGGTGCCAAGTCTCCTGCTCTCCG...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGCTCCCCTGCCATCCATaGCTGGTATCCTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMLPCHP*LVSCVC
Trigger: ACACACACAGGATACCAGCAATGGATGGCAGGGGAG...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCGGATGGAATCTTGCATaGTCCTGCTCTGTCCCACCC +
Preference number: 5 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPGWNLA*SCSVPP
Trigger: GGGTGGGACAGAGCAGGACAATGCAAGATTCCATCC...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS CCA 90 bp TCGCCTAAGGTCTTTGTAAAGTCTTTGCTCATCTACCCAACCCTTTaGAGTCTAGGCCAGGAGCTCAGGGGGTGCTCCTGGACTAGGACA +
Preference number: 5 (lower is better)
Translates to: SPKVFVKSLLIYPTL*SLGQELRGCSWTRT
Trigger: TGTCCTAGTCCAGGAGCACCCCCTGAGCTCCTGGCCTAGACTCCAAAGGGTTGGGTAGATGAGCAAAGACTTTACAAAGACCTTAGGCGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CAA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTCGGAGAGCAGGAGACTaGGCACCACCTTCATGTGAT +
Preference number: 5 (lower is better)
Translates to: DGILHCPALSHPGCEFSPRRAGD*APPSCD
Trigger: ATCACATGAAGGTGGTGCCAAGTCTCCTGCTCTCCG...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTTCCTCTTCCTCCTaGGGAGCCTGCACTACCCTG +
Preference number: 5 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNSSSSS*GACTTL
Trigger: CAGGGTAGTGCAGGCTCCCAAGGAGGAAGAGGAAGA...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTGGAGAGAAGACCATGTaGCCATCGTGCCTCATGGAG +
Preference number: 5 (lower is better)
Translates to: DGILHCPALSHPGCEFSPGEKTM*PSCLME
Trigger: CTCCATGAGGCACGATGGCAACATGGTCTTCTCTCC...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTGGCAGGAGCCCGGGCTaGGTGGGCTTCAGGGCCTGC +
Preference number: 5 (lower is better)
Translates to: KQSKSLKQHAILSSGMESGRSPG*VGFRAC
Trigger: GCAGGCCCTGAAGCCCACCAAGCCCGGGCTCCTGCC...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGAGGCCCAGTTCCAGGTaGCGGGAGAGGGTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: SLKQHAILSSGMESCIVLRPSSR*RERVSL
Trigger: CAGAGAGACCCTCTCCCGCAACCTGGAACTGGGCCT...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGAAGGTGGAGGCAAACTaGCCTGCACCGTACATCATG +
Preference number: 5 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMKVEAN*PAPYIM
Trigger: CATGATGTACGGTGCAGGCAAGTTTGCCTCCACCTT...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCAATGGCCGGTCCACTTaGATGACAGGAGGCATGGAA +
Preference number: 5 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPNGRST*MTGGME
Trigger: TTCCATGCCTCCTGTCATCAAAGTGGACCGGCCATT...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTCATCTACCCAACCCTTaGGAGTCTAGGCCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: DGILHCPALSHPGCEFSPHLPNP*ESRPGA
Trigger: AGCTCCTGGCCTAGACTCCAAAGGGTTGGGTAGATG...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS CCA 90 bp GAGTGGTGGTGGGTGAAATATCAAGCCTTTCAAGCCTCTTTCCCTTaGCCTCCTTCCTGCAGAGGAGCCCCTTGTGTCTATAATTCGCCT +
Preference number: 5 (lower is better)
Translates to: EWWWVKYQAFQASFP*PPSCRGAPCVYNSP
Trigger: AGGCGAATTATAGACACAAGGGGCTCCTCTGCAGGAAGGAGGCCAAGGGAAAGAGGCTTGAAAGGCTTGATATTTCACCCACCACCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CAA 90 bp TTTCACCCTGGGACAAAGTTCATGCTTATATTCTGTTTAACCCCCATGGGTAGCAGGCCCAGTTCCAGGTaGCGGGAGAGGGTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: FHPGTKFMLIFCLTPMGSRPSSR*RERVSL
Trigger: CAGAGAGACCCTCTCCCGCAACCTGGAACTGGGCCT...GCTACCCATGGGGGTTAAACAGAATATAAGCATGAACTTTGTCCCAGGGTGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTAGGCCCAGTTCCAGGTaGCGGGAGAGGGTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLRPSSR*RERVSL
Trigger: CAGAGAGACCCTCTCCCGCAACCTGGAACTGGGCCT...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCTTGGCCTGTGAGGCATaGCGAAAATTCATAGGCACG +
Preference number: 5 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPLACEA*RKFIGT
Trigger: CGTGCCTATGAATTTTCGCAATGCCTCACAGGCCAA...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTAATGGCCGGTCCACTTaGATGACAGGAGGCATGGAA +
Preference number: 5 (lower is better)
Translates to: DGILHCPALSHPGCEFSPNGRST*MTGGME
Trigger: TTCCATGCCTCCTGTCATCAAAGTGGACCGGCCATT...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGATCTGCTGGGGGTCTTaGAATGTATCCCCCTCAGAT +
Preference number: 5 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMICWGS*NVSPSD
Trigger: ATCTGAGGGGGATACATTCAAAGACCCCCAGCAGAT...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATCATCTACCCAACCCTTaGGAGTCTAGGCCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNHLPNP*ESRPGA
Trigger: AGCTCCTGGCCTAGACTCCAAAGGGTTGGGTAGATG...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CAA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCCTGTTCTTGGAGCTaGTCCTGCAGTCTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNSCSWS*SCSLQW
Trigger: CCACTGCAGACTGCAGGACAAGCTCCAAGAACAGGA...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CAA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTACCAAAGCTTCAGCTTaGCAGCCCAGAACCTTCAGC +
Preference number: 5 (lower is better)
Translates to: DGILHCPALSHPGCEFSPTKASA*QPRTFS
Trigger: GCTGAAGGTTCTGGGCTGCAAAGCTGAAGCTTTGGT...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614630.4
CDS CCA 90 bp GCACCGTACATCATGGGCACCTTAATGGTCTTGTACTTGTCCAGGTaGAAAGTGTCGACTTCGGTGAAGACAGGGTCAAATGGGGTCAAC +
Preference number: 5 (lower is better)
Translates to: APYIMGTLMVLYLSR*KVSTSVKTGSNGVN
Trigger: GTTGACCCCATTTGACCCTGTCTTCACCGAAGTCGACACTTTCCACCTGGACAAGTACAAGACCATTAAGGTGCCCATGATGTACGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGTCTTCCTCTTCCTCCTaGGGAGCCTGCACTACCCTG +
Preference number: 5 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLSSSSS*GACTTL
Trigger: CAGGGTAGTGCAGGCTCCCAAGGAGGAAGAGGAAGA...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTTCTTCCTCTTCCTCCTaGGGAGCCTGCACTACCCTG +
Preference number: 5 (lower is better)
Translates to: LRTKGTLSPAIHCWYPVCSSSSS*GACTTL
Trigger: CAGGGTAGTGCAGGCTCCCAAGGAGGAAGAGGAAGA...ACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTTGGCCTGTGAGGCATaGCGAAAATTCATAGGCACG +
Preference number: 5 (lower is better)
Translates to: DGILHCPALSHPGCEFSPLACEA*RKFIGT
Trigger: CGTGCCTATGAATTTTCGCAATGCCTCACAGGCCAA...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TTGGAGACTAGACTCAGGAAAGGTAGGCTTCTGACTCTGCCATTGCCACACTGGATCTGCTGGGGGTCTTaGAATGTATCCCCCTCAGAT +
Preference number: 5 (lower is better)
Translates to: LETRLRKGRLLTLPLPHWICWGS*NVSPSD
Trigger: ATCTGAGGGGGATACATTCAAAGACCCCCAGCAGAT...CCAGTGTGGCAATGGCAGAGTCAGAAGCCTACCTTTCCTGAGTCTAGTCTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTTTTAAGACTCGACACTaGGCCGGGCGTGGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCFKTRH*AGRGGS
Trigger: TGAGCCACCACGCCCGGCCAAGTGTCGAGTCTTAAA...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGTCAAGCCTCTTTCCCTaGGCCTCCTTCCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLSSLFP*ASFLQR
Trigger: CCTCTGCAGGAAGGAGGCCAAGGGAAAGAGGCTTGA...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CAA 90 bp GATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTACTTCCTTCCTGTTCTaGGAGCTTGTCCTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: DGILHCPALSHPGCEFSPTSFLF*ELVLQS
Trigger: AGACTGCAGGACAAGCTCCAAGAACAGGAAGGAAGT...AGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS GCA 90 bp ATGGCCAAGGACATGCCAAATGGAGAGAAGACCATGTTGCCATCGTaGCTCATGGAGATCTTTCGCAGCAGGCTGAATCCGAAGTTTGAA +
Preference number: 5 (lower is better)
Translates to: MAKDMPNGEKTMLPS*LMEIFRSRLNPKFE
Trigger: TTCAAACTTCGGATTCAGCCTGCTGCGAAAGATCTCCATGAGGCACGATGGCAACATGGTCTTCTCTCCATTTGGCATGTCCTTGGCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGGAGAGAAGACCATGTaGCCATCGTGCCTCATGGAG +
Preference number: 5 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCGEKTM*PSCLME
Trigger: CTCCATGAGGCACGATGGCAACATGGTCTTCTCTCC...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGGAGAGAAGACCATGTaGCCATCGTGCCTCATGGAG +
Preference number: 5 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLGEKTM*PSCLME
Trigger: CTCCATGAGGCACGATGGCAACATGGTCTTCTCTCC...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTAAGTGGAGCCCTCTCTaGATCTGGGTTTCAGTCGGC +
Preference number: 5 (lower is better)
Translates to: LRTKGTLSPAIHCWYPVCKWSPL*IWVSVG
Trigger: GCCGACTGAAACCCAGATCAAGAGAGGGCTCCACTT...ACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCATCTCATCAAACAGTTaGGGAATTTTCCCCCGAGTC +
Preference number: 5 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPISSNS*GIFPRV
Trigger: GACTCGGGGGAAAATTCCCAAACTGTTTGATGAGAT...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGCTCCCCTGCCATCCATaGCTGGTATCCTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLLPCHP*LVSCVC
Trigger: ACACACACAGGATACCAGCAATGGATGGCAGGGGAG...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGGGATGGAATCTTGCATaGTCCTGCTCTGTCCCACCC +
Preference number: 5 (lower is better)
Translates to: SLKQHAILSSGMESCIVLGWNLA*SCSVPP
Trigger: GGGTGGGACAGAGCAGGACAATGCAAGATTCCATCC...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTCTCCCCTTGCCCAATGGTCATGCCTGTGTACTaGGGAAATCTGAAACTGAGT +
Preference number: 5 (lower is better)
Translates to: LHCPALSHPGCEFSPCPMVMPVY*GNLKLS
Trigger: ACTCAGTTTCAGATTTCCCAAGTACACAGGCATGAC...CATTGGGCAAGGGGAGAATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTTCAAGCCTCTTTCCCTaGGCCTCCTTCCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLSSLFP*ASFLQR
Trigger: CCTCTGCAGGAAGGAGGCCAAGGGAAAGAGGCTTGA...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CAA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGCATCTACCCAACCCTTaGGAGTCTAGGCCAGGAGCT +
Preference number: 5 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLHLPNP*ESRPGA
Trigger: AGCTCCTGGCCTAGACTCCAAAGGGTTGGGTAGATG...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CAA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGTTCCAGTGTGTGGCCTaGGGTCCTGGAAAAGTCCTT +
Preference number: 5 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLFQCVA*GPGKVL
Trigger: AAGGACTTTTCCAGGACCCAAGGCCACACACTGGAA...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTCGGAGAGCAGGAGACTaGGCACCACCTTCATGTGAT +
Preference number: 5 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLRRAGD*APPSCD
Trigger: ATCACATGAAGGTGGTGCCAAGTCTCCTGCTCTCCG...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTGGAGAGAAGACCATGTaGCCATCGTGCCTCATGGAG +
Preference number: 5 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLGEKTM*PSCLME
Trigger: CTCCATGAGGCACGATGGCAACATGGTCTTCTCTCC...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGGAGAGAAGACCATGTaGCCATCGTGCCTCATGGAG +
Preference number: 5 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHEGEKTM*PSCLME
Trigger: CTCCATGAGGCACGATGGCAACATGGTCTTCTCTCC...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTAGGCCCAGTTCCAGGTaGCGGGAGAGGGTCTCTCTG +
Preference number: 5 (lower is better)
Translates to: KQSKSLKQHAILSSGMESRPSSR*RERVSL
Trigger: CAGAGAGACCCTCTCCCGCAACCTGGAACTGGGCCT...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAAGGTGGAGGCAAACTaGCCTGCACCGTACATCATG +
Preference number: 5 (lower is better)
Translates to: AGILCVFDTSDSASTTARKVEAN*PAPYIM
Trigger: CATGATGTACGGTGCAGGCAAGTTTGCCTCCACCTT...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGAAGGTGGAGGCAAACTaGCCTGCACCGTACATCATG +
Preference number: 5 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLKVEAN*PAPYIM
Trigger: CATGATGTACGGTGCAGGCAAGTTTGCCTCCACCTT...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGCATGGTGGCATTTCCTaGGTAGGGCAGTTTGAGGAC +
Preference number: 5 (lower is better)
Translates to: SLKQHAILSSGMESCIVLHGGIS*VGQFED
Trigger: GTCCTCAAACTGCCCTACCAAGGAAATGCCACCATG...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGACATGGTGGCATTTCCTaGGTAGGGCAGTTTGAGGAC +
Preference number: 5 (lower is better)
Translates to: AGILCVFDTSDSASTTARHGGIS*VGQFED
Trigger: GTCCTCAAACTGCCCTACCAAGGAAATGCCACCATG...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTCTCCCCTGCCATCCATaGCTGGTATCCTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLLPCHP*LVSCVC
Trigger: ACACACACAGGATACCAGCAATGGATGGCAGGGGAG...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAACTCCCCTGCCATCCATaGCTGGTATCCTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHELPCHP*LVSCVC
Trigger: ACACACACAGGATACCAGCAATGGATGGCAGGGGAG...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TTTCACCCTGGGACAAAGTTCATGCTTATATTCTGTTTAACCCCCATGGGTAGCGGATGGAATCTTGCATaGTCCTGCTCTGTCCCACCC +
Preference number: 5 (lower is better)
Translates to: FHPGTKFMLIFCLTPMGSGWNLA*SCSVPP
Trigger: GGGTGGGACAGAGCAGGACAATGCAAGATTCCATCC...GCTACCCATGGGGGTTAAACAGAATATAAGCATGAACTTTGTCCCAGGGTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTGGATGGAATCTTGCATaGTCCTGCTCTGTCCCACCC +
Preference number: 5 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLGWNLA*SCSVPP
Trigger: GGGTGGGACAGAGCAGGACAATGCAAGATTCCATCC...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGCCTCTGCCAAGCGATTaGATGCACCATGGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: SLKQHAILSSGMESCIVLPLPSD*MHHGSR
Trigger: TCTGCTTCCATGGTGCATCAAATCGCTTGGCAGAGG...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGACCTCTGCCAAGCGATTaGATGCACCATGGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: AGILCVFDTSDSASTTARPLPSD*MHHGSR
Trigger: TCTGCTTCCATGGTGCATCAAATCGCTTGGCAGAGG...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATCCACACTGGAAGACCTaGGACAAGTATTTTGTTCCC +
Preference number: 5 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNPHWKT*DKYFVP
Trigger: GGGAACAAAATACTTGTCCAAGGTCTTCCAGTGTGG...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTTCCTGTTCTTGGAGCTaGTCCTGCAGTCTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLSCSWS*SCSLQW
Trigger: CCACTGCAGACTGCAGGACAAGCTCCAAGAACAGGA...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CAA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTAGGATGGAGGTCTTaGCACTGCTCAGCCACACAG +
Preference number: 5 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHEVGWRS*HCSATQ
Trigger: CTGTGTGGCTGAGCAGTGCAAAGACCTCCATCCTAC...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554723.5
ENST00000616057.2
CDS TCA 90 bp CTCAGATTCAGCATCTACTACAGCACGAAGTGCTTATGCGTGTCCTaGATTATAGGAGAGTCGGATTCACCACCCTGCCCAGAAACAGAA +
Preference number: 5 (lower is better)
Translates to: LRFSIYYSTKCLCVS*IIGESDSPPCPETE
Trigger: TTCTGTTTCTGGGCAGGGTGGTGAATCCGACTCTCCTATAATTCAGGACACGCATAAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp CTAAGGAAGATCAGGGATATTTACGATTTTCCTTTTCACCCTGGGACAAAGTTCTCTTCCTCTTCCTCCTaGGGAGCCTGCACTACCCTG +
Preference number: 5 (lower is better)
Translates to: LRKIRDIYDFPFHPGTKFSSSSS*GACTTL
Trigger: CAGGGTAGTGCAGGCTCCCAAGGAGGAAGAGGAAGA...GAACTTTGTCCCAGGGTGAAAAGGAAAATCGTAAATATCCCTGATCTTCCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGTTGGCCTGTGAGGCATaGCGAAAATTCATAGGCACG +
Preference number: 5 (lower is better)
Translates to: SLKQHAILSSGMESCIVLLACEA*RKFIGT
Trigger: CGTGCCTATGAATTTTCGCAATGCCTCACAGGCCAA...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTTTGGCCTGTGAGGCATaGCGAAAATTCATAGGCACG +
Preference number: 5 (lower is better)
Translates to: LRTKGTLSPAIHCWYPVCLACEA*RKFIGT
Trigger: CGTGCCTATGAATTTTCGCAATGCCTCACAGGCCAA...ACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TTTCACCCTGGGACAAAGTTCATGCTTATATTCTGTTTAACCCCCATGGGTAGCAAGGTGGAGGCAAACTaGCCTGCACCGTACATCATG +
Preference number: 5 (lower is better)
Translates to: FHPGTKFMLIFCLTPMGSKVEAN*PAPYIM
Trigger: CATGATGTACGGTGCAGGCAAGTTTGCCTCCACCTT...GCTACCCATGGGGGTTAAACAGAATATAAGCATGAACTTTGTCCCAGGGTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAACATGGTGGCATTTCCTaGGTAGGGCAGTTTGAGGAC +
Preference number: 5 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHEHGGIS*VGQFED
Trigger: GTCCTCAAACTGCCCTACCAAGGAAATGCCACCATG...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAATCTGCTGGGGGTCTTaGAATGTATCCCCCTCAGAT +
Preference number: 5 (lower is better)
Translates to: AGILCVFDTSDSASTTARICWGS*NVSPSD
Trigger: ATCTGAGGGGGATACATTCAAAGACCCCCAGCAGAT...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGATCTGCTGGGGGTCTTaGAATGTATCCCCCTCAGAT +
Preference number: 5 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLICWGS*NVSPSD
Trigger: ATCTGAGGGGGATACATTCAAAGACCCCCAGCAGAT...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAATTTCCCCCGCTCGGTaGGAAACCCTGAATTTGTGT +
Preference number: 5 (lower is better)
Translates to: AGILCVFDTSDSASTTARISPAR*ETLNLC
Trigger: ACACAAATTCAGGGTTTCCAACCGAGCGGGGGAAAT...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGATTTCCCCCGCTCGGTaGGAAACCCTGAATTTGTGT +
Preference number: 5 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLISPAR*ETLNLC
Trigger: ACACAAATTCAGGGTTTCCAACCGAGCGGGGGAAAT...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS GCA 90 bp GACATGACAACGAAAATTCTTGTCAAAGGTGGAGGCAAACTTGCCTaGACCGTACATCATGGGCACCTTAATGGTCTTGTACTTGTCCAG +
Preference number: 5 (lower is better)
Translates to: DMTTKILVKGGGKLA*TVHHGHLNGLVLVQ
Trigger: CTGGACAAGTACAAGACCATTAAGGTGCCCATGATGTACGGTGCAGGCAAGTTTGCCTCCACCTTTGACAAGAATTTTCGTTGTCATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTCTTCCTCTTCCTCCTaGGGAGCCTGCACTACCCTG +
Preference number: 5 (lower is better)
Translates to: KQSKSLKQHAILSSGMESSSSSS*GACTTL
Trigger: CAGGGTAGTGCAGGCTCCCAAGGAGGAAGAGGAAGA...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTAAAGTGGAGCCCTCTCTaGATCTGGGTTTCAGTCGGC +
Preference number: 5 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVKWSPL*IWVSVG
Trigger: GCCGACTGAAACCCAGATCAAGAGAGGGCTCCACTT...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp GCCTGTGTACTTGGGAAATCTGAAACTGAGTGTCTTAGGAACTTCTTAAAGCAAAAGTGGAGCCCTCTCTaGATCTGGGTTTCAGTCGGC +
Preference number: 5 (lower is better)
Translates to: ACVLGKSETECLRNFLKQKWSPL*IWVSVG
Trigger: GCCGACTGAAACCCAGATCAAGAGAGGGCTCCACTT...TTGCTTTAAGAAGTTCCTAAGACACTCAGTTTCAGATTTCCCAAGTACACAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCTTGAAGAAAGTCTCTTaGACATCAAAATCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPLKKVS*TSKSLW
Trigger: CCACAAGGATTTTGATGTCAAAGAGACTTTCTTCAA...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTTTGGCCTGTGAGGCATaGCGAAAATTCATAGGCACG +
Preference number: 5 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLLACEA*RKFIGT
Trigger: CGTGCCTATGAATTTTCGCAATGCCTCACAGGCCAA...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGGCACCTTAATGGTCTaGTACTTGTCCAGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLGTLMV*YLSRWK
Trigger: TTTCCACCTGGACAAGTACAAGACCATTAAGGTGCC...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp GCCTGTGTACTTGGGAAATCTGAAACTGAGTGTCTTAGGAACTTCTTAAAGCAACTCCCCTGCCATCCATaGCTGGTATCCTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: ACVLGKSETECLRNFLKQLPCHP*LVSCVC
Trigger: ACACACACAGGATACCAGCAATGGATGGCAGGGGAG...TTGCTTTAAGAAGTTCCTAAGACACTCAGTTTCAGATTTCCCAAGTACACAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTACTCCCCTGCCATCCATaGCTGGTATCCTGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVLPCHP*LVSCVC
Trigger: ACACACACAGGATACCAGCAATGGATGGCAGGGGAG...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATAAGAGTAAAAAGGGCTaGGAGACTAGACTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNKSKKG*ETRLRK
Trigger: TTTCCTGAGTCTAGTCTCCAAGCCCTTTTTACTCTT...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp TTCAGCACTGTCCACCGTTTCAGGCATCTGCTGGGGGTCTTTGAATGTATCCCCCTTAAAAGTGGGAAATaGGACTGGATGCTACTTTAT +
Preference number: 5 (lower is better)
Translates to: FSTVHRFRHLLGVFECIPLKSGK*DWMLLY
Trigger: ATAAAGTAGCATCCAGTCCAATTTCCCACTTTTAAG...GGGGATACATTCAAAGACCCCCAGCAGATGCCTGAAACGGTGGACAGTGCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTCAAGCCTCTTTCCCTaGGCCTCCTTCCTGCAGAGG +
Preference number: 5 (lower is better)
Translates to: KQSKSLKQHAILSSGMESSSLFP*ASFLQR
Trigger: CCTCTGCAGGAAGGAGGCCAAGGGAAAGAGGCTTGA...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CAA 90 bp CTAAGGAAGATCAGGGATATTTACGATTTTCCTTTTCACCCTGGGACAAAGTTCTTCCAGTGTGTGGCCTaGGGTCCTGGAAAAGTCCTT +
Preference number: 5 (lower is better)
Translates to: LRKIRDIYDFPFHPGTKFFQCVA*GPGKVL
Trigger: AAGGACTTTTCCAGGACCCAAGGCCACACACTGGAA...GAACTTTGTCCCAGGGTGAAAAGGAAAATCGTAAATATCCCTGATCTTCCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTCCTCTTCCTCCTaGGGAGCCTGCACTACCCTG +
Preference number: 5 (lower is better)
Translates to: NKQSKSLKQHAILSSGMESSSSS*GACTTL
Trigger: CAGGGTAGTGCAGGCTCCCAAGGAGGAAGAGGAAGA...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTTGACATCAAAATCCTaGTGGATGAAGGCAAAACTC +
Preference number: 5 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNLTSKS*WMKAKL
Trigger: GAGTTTTGCCTTCATCCACAAGGATTTTGATGTCAA...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGATCTCATCAAACAGTTaGGGAATTTTCCCCCGAGTC +
Preference number: 5 (lower is better)
Translates to: SLKQHAILSSGMESCIVLISSNS*GIFPRV
Trigger: GACTCGGGGGAAAATTCCCAAACTGTTTGATGAGAT...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TTAGATGGAAGGAAGAGTAAAAAGGGCTTGGAGACTAGACTCAGGAAAGGTAGGGGCACCTTAATGGTCTaGTACTTGTCCAGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: LDGRKSKKGLETRLRKGRGTLMV*YLSRWK
Trigger: TTTCCACCTGGACAAGTACAAGACCATTAAGGTGCC...CCTACCTTTCCTGAGTCTAGTCTCCAAGCCCTTTTTACTCTTCCTTCCATCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTGGCACCTTAATGGTCTaGTACTTGTCCAGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLGTLMV*YLSRWK
Trigger: TTTCCACCTGGACAAGTACAAGACCATTAAGGTGCC...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGGCACCTTAATGGTCTaGTACTTGTCCAGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHEGTLMV*YLSRWK
Trigger: TTTCCACCTGGACAAGTACAAGACCATTAAGGTGCC...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTAAATGGCCGGTCCACTTaGATGACAGGAGGCATGGAA +
Preference number: 5 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVNGRST*MTGGME
Trigger: TTCCATGCCTCCTGTCATCAAAGTGGACCGGCCATT...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGTATGCTGTTGTTGCTTaGCAGTGTATGTGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: SLKQHAILSSGMESCIVLYAVVA*QCMWWE
Trigger: TTCCCACCACATACACTGCAAAGCAACAACAGCATA...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp ATGACTTATCCACTAGATGCAGAAGACACAGTGCCCAAGGCTGACAGTACTGTATATGCTGTTGTTGCTTaGCAGTGTATGTGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: MTYPLDAEDTVPKADSTVYAVVA*QCMWWE
Trigger: TTCCCACCACATACACTGCAAAGCAACAACAGCATA...TACAGTACTGTCAGCCTTGGGCACTGTGTCTTCTGCATCTAGTGGATAAGTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATTTAAGACTCGACACTaGGCCGGGCGTGGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: NKQSKSLKQHAILSSGMEFKTRH*AGRGGS
Trigger: TGAGCCACCACGCCCGGCCAAGTGTCGAGTCTTAAA...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTGTAGGATGGAGGTCTTaGCACTGCTCAGCCACACAG +
Preference number: 5 (lower is better)
Translates to: KQSKSLKQHAILSSGMESVGWRS*HCSATQ
Trigger: CTGTGTGGCTGAGCAGTGCAAAGACCTCCATCCTAC...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CAA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAAAAGTGGAGCCCTCTCTaGATCTGGGTTTCAGTCGGC +
Preference number: 5 (lower is better)
Translates to: NKQSKSLKQHAILSSGMEKWSPL*IWVSVG
Trigger: GCCGACTGAAACCCAGATCAAGAGAGGGCTCCACTT...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AGTAGTGGGATGGAATCTTGCATTGTCCTGCTCTGTCCCACCCAGGATGTGAATTTGAAGAAAGTCTCTTaGACATCAAAATCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: SSGMESCIVLLCPTQDVNLKKVS*TSKSLW
Trigger: CCACAAGGATTTTGATGTCAAAGAGACTTTCTTCAA...ATTCACATCCTGGGTGGGACAGAGCAGGACAATGCAAGATTCCATCCCACTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTATCTCATCAAACAGTTaGGGAATTTTCCCCCGAGTC +
Preference number: 5 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLISSNS*GIFPRV
Trigger: GACTCGGGGGAAAATTCCCAAACTGTTTGATGAGAT...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AGTGAAGACTTCTACAATGTTAAGATTTCCCCCGCTCGGTTGGAAACCCTGAATTTAATGGTCTTGTACTaGTCCAGGTGGAAAGTGTCG +
Preference number: 5 (lower is better)
Translates to: SEDFYNVKISPARLETLNLMVLY*SRWKVS
Trigger: CGACACTTTCCACCTGGACAAGTACAAGACCATTAA...ATTCAGGGTTTCCAACCGAGCGGGGGAAATCTTAACATTGTAGAAGTCTTCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTTTAATGGTCTTGTACTaGTCCAGGTGGAAAGTGTCG +
Preference number: 5 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLLMVLY*SRWKVS
Trigger: CGACACTTTCCACCTGGACAAGTACAAGACCATTAA...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAATTAATGGTCTTGTACTaGTCCAGGTGGAAAGTGTCG +
Preference number: 5 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHELMVLY*SRWKVS
Trigger: CGACACTTTCCACCTGGACAAGTACAAGACCATTAA...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTAAGGTGGAGGCAAACTaGCCTGCACCGTACATCATG +
Preference number: 5 (lower is better)
Translates to: KQSKSLKQHAILSSGMESKVEAN*PAPYIM
Trigger: CATGATGTACGGTGCAGGCAAGTTTGCCTCCACCTT...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTCATGGTGGCATTTCCTaGGTAGGGCAGTTTGAGGAC +
Preference number: 5 (lower is better)
Translates to: KQSKSLKQHAILSSGMESHGGIS*VGQFED
Trigger: GTCCTCAAACTGCCCTACCAAGGAAATGCCACCATG...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTAATGGCCGGTCCACTTaGATGACAGGAGGCATGGAA +
Preference number: 5 (lower is better)
Translates to: KQSKSLKQHAILSSGMESNGRST*MTGGME
Trigger: TTCCATGCCTCCTGTCATCAAAGTGGACCGGCCATT...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTGCATTGTCCTGGTATCCTGTGTGTGTTaGATACCTCAGATTCAGCAT +
Preference number: 5 (lower is better)
Translates to: SLKQHAILSSGMESCIVLVSCVC*IPQIQH
Trigger: ATGCTGAATCTGAGGTATCAAACACACACAGGATAC...CAGGACAATGCAAGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTGTTaGATACCTCAGATTCAGCAT +
Preference number: 5 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLVSCVC*IPQIQH
Trigger: ATGCTGAATCTGAGGTATCAAACACACACAGGATAC...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGGGATGGAATCTTGCATaGTCCTGCTCTGTCCCACCC +
Preference number: 5 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQGWNLA*SCSVPP
Trigger: GGGTGGGACAGAGCAGGACAATGCAAGATTCCATCC...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp CACCCTAAACTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGCTGGGTTTGGCCATATaGATTTCAGTGAGTATTGTG +
Preference number: 5 (lower is better)
Translates to: HPKLVKNKRNTLPCHPLLLGLAI*ISVSIV
Trigger: CACAATACTCACTGAAATCAATATGGCCAAACCCAG...CAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAGTTTAGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTCTTTGTAAAGTCTTaGCTCATCTACCCAACCCTT +
Preference number: 5 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCVFVKS*LIYPTL
Trigger: AAGGGTTGGGTAGATGAGCAAAGACTTTACAAAGAC...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CAA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAGTCTTTGTAAAGTCTTaGCTCATCTACCCAACCCTT +
Preference number: 5 (lower is better)
Translates to: AGILCVFDTSDSASTTARVFVKS*LIYPTL
Trigger: AAGGGTTGGGTAGATGAGCAAAGACTTTACAAAGAC...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CAA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCCTGTTCTTGGAGCTaGTCCTGCAGTCTGCAGTGG +
Preference number: 5 (lower is better)
Translates to: NKQSKSLKQHAILSSGMESCSWS*SCSLQW
Trigger: CCACTGCAGACTGCAGGACAAGCTCCAAGAACAGGA...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CAA 90 bp GCTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGATTGACATCAAAATCCTaGTGGATGAAGGCAAAACTC +
Preference number: 5 (lower is better)
Translates to: AGILCVFDTSDSASTTARLTSKS*WMKAKL
Trigger: GAGTTTTGCCTTCATCCACAAGGATTTTGATGTCAA...TCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTTTGGCCTGTGAGGCATaGCGAAAATTCATAGGCACG +
Preference number: 5 (lower is better)
Translates to: KQSKSLKQHAILSSGMESLACEA*RKFIGT
Trigger: CGTGCCTATGAATTTTCGCAATGCCTCACAGGCCAA...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTAGGCACCTTAATGGTCTaGTACTTGTCCAGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVGTLMV*YLSRWK
Trigger: TTTCCACCTGGACAAGTACAAGACCATTAAGGTGCC...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGCATGGTGGCATTTCCTaGGTAGGGCAGTTTGAGGAC +
Preference number: 5 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQHGGIS*VGQFED
Trigger: GTCCTCAAACTGCCCTACCAAGGAAATGCCACCATG...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAAAATGGCCGGTCCACTTaGATGACAGGAGGCATGGAA +
Preference number: 5 (lower is better)
Translates to: NKQSKSLKQHAILSSGMENGRST*MTGGME
Trigger: TTCCATGCCTCCTGTCATCAAAGTGGACCGGCCATT...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGAATGGCCGGTCCACTTaGATGACAGGAGGCATGGAA +
Preference number: 5 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQNGRST*MTGGME
Trigger: TTCCATGCCTCCTGTCATCAAAGTGGACCGGCCATT...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AGTGAAGACTTCTACAATGTTAAGATTTCCCCCGCTCGGTTGGAAACCCTGAATGTATCCTGTGTGTGTTaGATACCTCAGATTCAGCAT +
Preference number: 5 (lower is better)
Translates to: SEDFYNVKISPARLETLNVSCVC*IPQIQH
Trigger: ATGCTGAATCTGAGGTATCAAACACACACAGGATAC...ATTCAGGGTTTCCAACCGAGCGGGGGAAATCTTAACATTGTAGAAGTCTTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTATCCTGTGTGTGTTaGATACCTCAGATTCAGCAT +
Preference number: 5 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHEVSCVC*IPQIQH
Trigger: ATGCTGAATCTGAGGTATCAAACACACACAGGATAC...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTACCACACTGGAAGACCTaGGACAAGTATTTTGTTCCC +
Preference number: 5 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVPHWKT*DKYFVP
Trigger: GGGAACAAAATACTTGTCCAAGGTCTTCCAGTGTGG...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAAAGAGTAAAAAGGGCTaGGAGACTAGACTCAGGAAA +
Preference number: 5 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHEKSKKG*ETRLRK
Trigger: TTTCCTGAGTCTAGTCTCCAAGCCCTTTTTACTCTT...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp TTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTGTGTTTTGACTTCCTGAGCTaGAATATCTTAGTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: LRTKGTLSPAIHCWYPVCFDFLS*NILVWR
Trigger: TCTCCAGACTAAGATATTCAAGCTCAGGAAGTCAAA...ACACACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTCTTTGTAAAGTCTTaGCTCATCTACCCAACCCTT +
Preference number: 5 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHEVFVKS*LIYPTL
Trigger: AAGGGTTGGGTAGATGAGCAAAGACTTTACAAAGAC...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CAA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTACTTCCTTCCTGTTCTaGGAGCTTGTCCTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: KQSKSLKQHAILSSGMESTSFLF*ELVLQS
Trigger: AGACTGCAGGACAAGCTCCAAGAACAGGAAGGAAGT...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CAA 90 bp CTGGTATCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAATTGACATCAAAATCCTaGTGGATGAAGGCAAAACTC +
Preference number: 5 (lower is better)
Translates to: LVSCVCLIPQIQHLLQHELTSKS*WMKAKL
Trigger: GAGTTTTGCCTTCATCCACAAGGATTTTGATGTCAA...TTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGATACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AGTGAAGACTTCTACAATGTTAAGATTTCCCCCGCTCGGTTGGAAACCCTGAATTTGACATCAAAATCCTaGTGGATGAAGGCAAAACTC +
Preference number: 5 (lower is better)
Translates to: SEDFYNVKISPARLETLNLTSKS*WMKAKL
Trigger: GAGTTTTGCCTTCATCCACAAGGATTTTGATGTCAA...ATTCAGGGTTTCCAACCGAGCGGGGGAAATCTTAACATTGTAGAAGTCTTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGATCTGCTGGGGGTCTTaGAATGTATCCCCCTCAGAT +
Preference number: 5 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQICWGS*NVSPSD
Trigger: ATCTGAGGGGGATACATTCAAAGACCCCCAGCAGAT...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp CTAGTTAAGAACAAAAGGAACACTCTCCCCTGCCATCCATTGCTGGTATCCTGTCTTAAAAGTGGGAAATaGGACTGGATGCTACTTTAT +
Preference number: 5 (lower is better)
Translates to: LVKNKRNTLPCHPLLVSCLKSGK*DWMLLY
Trigger: ATAAAGTAGCATCCAGTCCAATTTCCCACTTTTAAG...ACAGGATACCAGCAATGGATGGCAGGGGAGAGTGTTCCTTTTGTTCTTAACTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp GCCTGTGTACTTGGGAAATCTGAAACTGAGTGTCTTAGGAACTTCTTAAAGCAAGTCATGCCTGTGTACTaGGGAAATCTGAAACTGAGT +
Preference number: 5 (lower is better)
Translates to: ACVLGKSETECLRNFLKQVMPVY*GNLKLS
Trigger: ACTCAGTTTCAGATTTCCCAAGTACACAGGCATGAC...TTGCTTTAAGAAGTTCCTAAGACACTCAGTTTCAGATTTCCCAAGTACACAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp AGTGAAGACTTCTACAATGTTAAGATTTCCCCCGCTCGGTTGGAAACCCTGAATTTTGACTTCCTGAGCTaGAATATCTTAGTCTGGAGA +
Preference number: 5 (lower is better)
Translates to: SEDFYNVKISPARLETLNFDFLS*NILVWR
Trigger: TCTCCAGACTAAGATATTCAAGCTCAGGAAGTCAAA...ATTCAGGGTTTCCAACCGAGCGGGGGAAATCTTAACATTGTAGAAGTCTTCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGACTTCCTTCCTGTTCTaGGAGCTTGTCCTGCAGTCT +
Preference number: 5 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQTSFLF*ELVLQS
Trigger: AGACTGCAGGACAAGCTCCAAGAACAGGAAGGAAGT...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS-3UTR CAA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGGGCACCTTAATGGTCTaGTACTTGTCCAGGTGGAAA +
Preference number: 5 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQGTLMV*YLSRWK
Trigger: TTTCCACCTGGACAAGTACAAGACCATTAAGGTGCC...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp TCCTGTGTGTGTTTGATACCTCAGATTCAGCATCTACTACAGCACGAAGTGCTTATTATTATGCTGTTGTaGCTTTGCAGTGTATGTGGT +
Preference number: 5 (lower is better)
Translates to: SCVCLIPQIQHLLQHEVLIIMLL*LCSVCG
Trigger: ACCACATACACTGCAAAGCAACAACAGCATAATAAT...AAGCACTTCGTGCTGTAGTAGATGCTGAATCTGAGGTATCAAACACACACAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp AGTGAAGACTTCTACAATGTTAAGATTTCCCCCGCTCGGTTGGAAACCCTGAATGTAACCTGTTCTCAGTaGTTACAGCATATATATGTG +
Preference number: 5 (lower is better)
Translates to: SEDFYNVKISPARLETLNVTCSQ*LQHIYV
Trigger: CACATATATATGCTGTAACAACTGAGAACAGGTTAC...ATTCAGGGTTTCCAACCGAGCGGGGGAAATCTTAACATTGTAGAAGTCTTCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGATCTCATCAAACAGTTaGGGAATTTTCCCCCGAGTC +
Preference number: 5 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQISSNS*GIFPRV
Trigger: GACTCGGGGGAAAATTCCCAAACTGTTTGATGAGAT...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAAATCTCATCAAACAGTTaGGGAATTTTCCCCCGAGTC +
Preference number: 5 (lower is better)
Translates to: NKQSKSLKQHAILSSGMEISSNS*GIFPRV
Trigger: GACTCGGGGGAAAATTCCCAAACTGTTTGATGAGAT...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATTAATGGTCTTGTACTaGTCCAGGTGGAAAGTGTCG +
Preference number: 5 (lower is better)
Translates to: NKQSKSLKQHAILSSGMELMVLY*SRWKVS
Trigger: CGACACTTTCCACCTGGACAAGTACAAGACCATTAA...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTGTATCCTGTGTGTGTTaGATACCTCAGATTCAGCAT +
Preference number: 5 (lower is better)
Translates to: KQSKSLKQHAILSSGMESVSCVC*IPQIQH
Trigger: ATGCTGAATCTGAGGTATCAAACACACACAGGATAC...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTCTGGGTTTGGCCATATaGATTTCAGTGAGTATTGTG +
Preference number: 5 (lower is better)
Translates to: KQSKSLKQHAILSSGMESLGLAI*ISVSIV
Trigger: CACAATACTCACTGAAATCAATATGGCCAAACCCAG...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGAAGAAAGTCTCTTaGACATCAAAATCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVLKKVS*TSKSLW
Trigger: CCACAAGGATTTTGATGTCAAAGAGACTTTCTTCAA...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS-3UTR CAA 90 bp AAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAATCTCCTTGGACAAGTATTTaGTTCCCACTGGTATATAAG +
Preference number: 5 (lower is better)
Translates to: KQSKSLKQHAILSSGMESPWTSI*FPLVYK
Trigger: CTTATATACCAGTGGGAACAAAATACTTGTCCAAGG...AGATTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp CTAAGGAAGATCAGGGATATTTACGATTTTCCTTTTCACCCTGGGACAAAGTTCATTATTATGCTGTTGTaGCTTTGCAGTGTATGTGGT +
Preference number: 5 (lower is better)
Translates to: LRKIRDIYDFPFHPGTKFIIMLL*LCSVCG
Trigger: ACCACATACACTGCAAAGCAACAACAGCATAATAAT...GAACTTTGTCCCAGGGTGAAAAGGAAAATCGTAAATATCCCTGATCTTCCTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp TCGCCCATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTAGTAACCTGTTCTCAGTaGTTACAGCATATATATGTG +
Preference number: 5 (lower is better)
Translates to: SPMSHLVAFSIISLTVMVVTCSQ*LQHIYV
Trigger: CACATATATATGCTGTAACAACTGAGAACAGGTTAC...TACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCATGGGCGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp AATAAACAATCTAAAAGTCTTAAGCAGCATGCCATTCTGAGTAGTGGGATGGAACCTTGGACAAGTATTTaGTTCCCACTGGTATATAAG +
Preference number: 5 (lower is better)
Translates to: NKQSKSLKQHAILSSGMEPWTSI*FPLVYK
Trigger: CTTATATACCAGTGGGAACAAAATACTTGTCCAAGG...TTCCATCCCACTACTCAGAATGGCATGCTGCTTAAGACTTTTAGATTGTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS-3UTR CAA 90 bp ATGAGTCACTTAGTAGCCTTCTCTATAATCAGTTTGACTGTTATGGTATTGCAGTTGAAGAAAGTCTCTTaGACATCAAAATCCTTGTGG +
Preference number: 5 (lower is better)
Translates to: MSHLVAFSIISLTVMVLQLKKVS*TSKSLW
Trigger: CCACAAGGATTTTGATGTCAAAGAGACTTTCTTCAA...CTGCAATACCATAACAGTCAAACTGATTATAGAGAAGGCTACTAAGTGACTCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS CCA 72 bp AGCCTGCACTACCCTGCTGGTCTGGTTCTGAGGGGCTaGGGTCTCTGGCGACTGAGGACTGGGGGCCAAGCC +
Preference number: 6 (lower is better)
Translates to: SLHYPAGLVLRG*GLWRLRTGGQA
Trigger: GGCTTGGCCCCCAGTCCTCAGTCGCCAGAGACCCCAGCCCCTCAGAACCAGACCAGCAGGGTAGTGCAGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS CAA 90 bp CGGGTACCAGCCACACCTGTGCCAGGAGGACGGAGAGCAGGAGACTaGGCACCACCTTCATGTGATCGGCTGCGGAGGCCAAGGAGTGCC +
Preference number: 6 (lower is better)
Translates to: RVPATPVPGGRRAGD*APPSCDRLRRPRSA
Trigger: GGCACTCCTTGGCCTCCGCAGCCGATCACATGAAGGTGGTGCCAAGTCTCCTGCTCTCCGTCCTCCTGGCACAGGTGTGGCTGGTACCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS CAA 90 bp AGCCCGGGCTTGGTGGGCTTCAGGGCCTGCAAGTGGAGCCCTCTCTaGATCTGGGTTTCAGTCGGCCCTGTGGCCCCCAGCATCAAGCCT +
Preference number: 6 (lower is better)
Translates to: SPGLVGFRACKWSPL*IWVSVGPVAPSIKP
Trigger: AGGCTTGATGCTGGGGGCCACAGGGCCGACTGAAACCCAGATCAAGAGAGGGCTCCACTTGCAGGCCCTGAAGCCCACCAAGCCCGGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS GCA 72 bp CCAACCCTTTGGAGTCTAGGCCAGGAGCTCAGGGGGTaGTCCTGGACTAGGACACCATCCAGCATGGTGAGG +
Preference number: 6 (lower is better)
Translates to: PTLWSLGQELRG*SWTRTPSSMVR
Trigger: CCTCACCATGCTGGATGGTGTCCTAGTCCAGGAGCACCCCCTGAGCTCCTGGCCTAGACTCCAAAGGGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS CCA 72 bp CTTTGGAGTCTAGGCCAGGAGCTCAGGGGGTGCTCCTaGACTAGGACACCATCCAGCATGGTGAGGACGCAC +
Preference number: 6 (lower is better)
Translates to: LWSLGQELRGCS*TRTPSSMVRTH
Trigger: GTGCGTCCTCACCATGCTGGATGGTGTCCTAGTCCAGGAGCACCCCCTGAGCTCCTGGCCTAGACTCCAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS TCA 72 bp GGGGGTGCTCCTGGACTAGGACACCATCCAGCATGGTaGGGACGCACCTTCCTAGACAGAACCTGGGCAGTA +
Preference number: 6 (lower is better)
Translates to: GGAPGLGHHPAW*GRTFLDRTWAV
Trigger: TACTGCCCAGGTTCTGTCTAGGAAGGTGCGTCCTCACCATGCTGGATGGTGTCCTAGTCCAGGAGCACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS CCA 72 bp CAGTCGGCCCTGTGGCCCCCAGCATCAAGCCTGTCATaGCCAAGGACATGCCAAATGGAGAGAAGACCATGT +
Preference number: 6 (lower is better)
Translates to: QSALWPPASSLS*PRTCQMERRPC
Trigger: ACATGGTCTTCTCTCCATTTGGCATGTCCTTGGCCATGACAGGCTTGATGCTGGGGGCCACAGGGCCGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS CAA 90 bp TTGTGGATGAAGGCAAAACTCCCCTGTGTGAGGCCCAGTTCCAGGTaGCGGGAGAGGGTCTCTCTGAGTCCCTTAAAGAGGGAAGGCAGG +
Preference number: 6 (lower is better)
Translates to: LWMKAKLPCVRPSSR*RERVSLSPLKREGR
Trigger: CCTGCCTTCCCTCTTTAAGGGACTCAGAGAGACCCTCTCCCGCAACCTGGAACTGGGCCTCACACAGGGGAGTTTTGCCTTCATCCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS CAA 72 bp AAGGCAAAACTCCCCTGTGTGAGGCCCAGTTCCAGGTaGCGGGAGAGGGTCTCTCTGAGTCCCTTAAAGAGG +
Preference number: 6 (lower is better)
Translates to: KAKLPCVRPSSR*RERVSLSPLKR
Trigger: CCTCTTTAAGGGACTCAGAGAGACCCTCTCCCGCAACCTGGAACTGGGCCTCACACAGGGGAGTTTTGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS GCA 72 bp ATCCGAAGTTTGAAGTCTCCTTGGCAAGCTGCTGCCTaGTGGCCATCAGCCAGGCTTTCTCTTCCTCACTGG +
Preference number: 6 (lower is better)
Translates to: IRSLKSPWQAAA*WPSARLSLPHW
Trigger: CCAGTGAGGAAGAGAAAGCCTGGCTGATGGCCAGCAGGCAGCAGCTTGCCAAGGAGACTTCAAACTTCGGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS GCA 72 bp AGGCTGAATCCGAAGTTTGAAGTCTCCTTGGCAAGCTaGTGCCTGCTGGCCATCAGCCAGGCTTTCTCTTCC +
Preference number: 6 (lower is better)
Translates to: RLNPKFEVSLAS*CLLAISQAFSS
Trigger: GGAAGAGAAAGCCTGGCTGATGGCCAGCAGGCAGCAGCTTGCCAAGGAGACTTCAAACTTCGGATTCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS TCA 72 bp GGAGACCTGCTTACTCCGGCAGTGAGTGGTGGTGGGTaGAATATCAAGCCTTTCAAGCCTCTTTCCCTTGGC +
Preference number: 6 (lower is better)
Translates to: GDLLTPAVSGGG*NIKPFKPLSLG
Trigger: GCCAAGGGAAAGAGGCTTGAAAGGCTTGATATTTCACCCACCACCACTCACTGCCGGAGTAAGCAGGTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS GCA 72 bp TGGCCAAGGACATGCCAAATGGAGAGAAGACCATGTTaGCATCGTGCCTCATGGAGATCTTTCGCAGCAGGC +
Preference number: 6 (lower is better)
Translates to: WPRTCQMERRPC*HRASWRSFAAG
Trigger: GCCTGCTGCGAAAGATCTCCATGAGGCACGATGGCAACATGGTCTTCTCTCCATTTGGCATGTCCTTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS CCA 72 bp GGGAAGGGGAGACCTGCTTACTCCGGCAGTGAGTGGTaGTGGGTGAAATATCAAGCCTTTCAAGCCTCTTTC +
Preference number: 6 (lower is better)
Translates to: GKGRPAYSGSEW*WVKYQAFQASF
Trigger: GAAAGAGGCTTGAAAGGCTTGATATTTCACCCACCACCACTCACTGCCGGAGTAAGCAGGTCTCCCCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS CAA 72 bp GGTCTTTGTAAAGTCTTTGCTCATCTACCCAACCCTTaGGAGTCTAGGCCAGGAGCTCAGGGGGTGCTCCTG +
Preference number: 6 (lower is better)
Translates to: GLCKVFAHLPNP*ESRPGAQGVLL
Trigger: CAGGAGCACCCCCTGAGCTCCTGGCCTAGACTCCAAAGGGTTGGGTAGATGAGCAAAGACTTTACAAAGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS CAA 90 bp AAGCCTGTCATGGCCAAGGACATGCCAAATGGAGAGAAGACCATGTaGCCATCGTGCCTCATGGAGATCTTTCGCAGCAGGCTGAATCCG +
Preference number: 6 (lower is better)
Translates to: KPVMAKDMPNGEKTM*PSCLMEIFRSRLNP
Trigger: CGGATTCAGCCTGCTGCGAAAGATCTCCATGAGGCACGATGGCAACATGGTCTTCTCTCCATTTGGCATGTCCTTGGCCATGACAGGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS TCA 72 bp TGCCATCGTGCCTCATGGAGATCTTTCGCAGCAGGCTaGATCCGAAGTTTGAAGTCTCCTTGGCAAGCTGCT +
Preference number: 6 (lower is better)
Translates to: CHRASWRSFAAG*IRSLKSPWQAA
Trigger: AGCAGCTTGCCAAGGAGACTTCAAACTTCGGATTCAGCCTGCTGCGAAAGATCTCCATGAGGCACGATGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS GCA 72 bp GACATGCCAAATGGAGAGAAGACCATGTTGCCATCGTaGCTCATGGAGATCTTTCGCAGCAGGCTGAATCCG +
Preference number: 6 (lower is better)
Translates to: DMPNGEKTMLPS*LMEIFRSRLNP
Trigger: CGGATTCAGCCTGCTGCGAAAGATCTCCATGAGGCACGATGGCAACATGGTCTTCTCTCCATTTGGCATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS CCA 72 bp CAGCATCAAGCCTGTCATGGCCAAGGACATGCCAAATaGAGAGAAGACCATGTTGCCATCGTGCCTCATGGA +
Preference number: 6 (lower is better)
Translates to: QHQACHGQGHAK*REDHVAIVPHG
Trigger: TCCATGAGGCACGATGGCAACATGGTCTTCTCTCCATTTGGCATGTCCTTGGCCATGACAGGCTTGATGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS CAA 72 bp ATGGCCAAGGACATGCCAAATGGAGAGAAGACCATGTaGCCATCGTGCCTCATGGAGATCTTTCGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: MAKDMPNGEKTM*PSCLMEIFRSR
Trigger: CCTGCTGCGAAAGATCTCCATGAGGCACGATGGCAACATGGTCTTCTCTCCATTTGGCATGTCCTTGGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS CAA 90 bp GAGGCAAACTTGCCTGCACCGTACATCATGGGCACCTTAATGGTCTaGTACTTGTCCAGGTGGAAAGTGTCGACTTCGGTGAAGACAGGG +
Preference number: 6 (lower is better)
Translates to: EANLPAPYIMGTLMV*YLSRWKVSTSVKTG
Trigger: CCCTGTCTTCACCGAAGTCGACACTTTCCACCTGGACAAGTACAAGACCATTAAGGTGCCCATGATGTACGGTGCAGGCAAGTTTGCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS CAA 90 bp CTGGGTGCTCCTGGACATATATCGCCTAAGGTCTTTGTAAAGTCTTaGCTCATCTACCCAACCCTTTGGAGTCTAGGCCAGGAGCTCAGG +
Preference number: 6 (lower is better)
Translates to: LGAPGHISPKVFVKS*LIYPTLWSLGQELR
Trigger: CCTGAGCTCCTGGCCTAGACTCCAAAGGGTTGGGTAGATGAGCAAAGACTTTACAAAGACCTTAGGCGATATATGTCCAGGAGCACCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000393096.5
ENST00000554723.5
ENST00000616057.2
CDS CAA 72 bp TTGCCTGCACCGTACATCATGGGCACCTTAATGGTCTaGTACTTGTCCAGGTGGAAAGTGTCGACTTCGGTG +
Preference number: 6 (lower is better)
Translates to: LPAPYIMGTLMV*YLSRWKVSTSV
Trigger: CACCGAAGTCGACACTTTCCACCTGGACAAGTACAAGACCATTAAGGTGCCCATGATGTACGGTGCAGGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS TCA 72 bp AGCATCTACTACAGCACGAAGTGCTTATGCGTGTCCTaGATTATAGGAGAGTCGGATTCACCACCCTGCCCA +
Preference number: 6 (lower is better)
Translates to: SIYYSTKCLCVS*IIGESDSPPCP
Trigger: TGGGCAGGGTGGTGAATCCGACTCTCCTATAATTCAGGACACGCATAAGCACTTCGTGCTGTAGTAGATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS CAA 72 bp GCACCGTACATCATGGGCACCTTAATGGTCTTGTACTaGTCCAGGTGGAAAGTGTCGACTTCGGTGAAGACA +
Preference number: 6 (lower is better)
Translates to: APYIMGTLMVLY*SRWKVSTSVKT
Trigger: TGTCTTCACCGAAGTCGACACTTTCCACCTGGACAAGTACAAGACCATTAAGGTGCCCATGATGTACGGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS CAA 90 bp AACTTGCCTGCACCGTACATCATGGGCACCTTAATGGTCTTGTACTaGTCCAGGTGGAAAGTGTCGACTTCGGTGAAGACAGGGTCAAAT +
Preference number: 6 (lower is better)
Translates to: NLPAPYIMGTLMVLY*SRWKVSTSVKTGSN
Trigger: ATTTGACCCTGTCTTCACCGAAGTCGACACTTTCCACCTGGACAAGTACAAGACCATTAAGGTGCCCATGATGTACGGTGCAGGCAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS TCA 72 bp TCTTGTACTTGTCCAGGTGGAAAGTGTCGACTTCGGTaGAGACAGGGTCAAATGGGGTCAACCATTTCCCTT +
Preference number: 6 (lower is better)
Translates to: SCTCPGGKCRLR*RQGQMGSTISL
Trigger: AAGGGAAATGGTTGACCCCATTTGACCCTGTCTTCACCGAAGTCGACACTTTCCACCTGGACAAGTACAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS TCA 72 bp CCACCAGCATGGTGGCATTTCCTTGGTAGGGCAGTTTaGGGACATGACAACGAAAATTCTTGTCAAAGGTGG +
Preference number: 6 (lower is better)
Translates to: PPAWWHFLGRAV*GHDNENSCQRW
Trigger: CCACCTTTGACAAGAATTTTCGTTGTCATGTCCTCAAACTGCCCTACCAAGGAAATGCCACCATGCTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS CCA 72 bp TCAGCTGCAAGACTTCCAGTGTGTGGCCTTGGGTCCTaGAAAAGTCCTTCATTTAGAGCAGAAACCAAAGCT +
Preference number: 6 (lower is better)
Translates to: SAARLPVCGLGS*KSPSFRAETKA
Trigger: AGCTTTGGTTTCTGCTCTAAATGAAGGACTTTTCCAGGACCCAAGGCCACACACTGGAAGTCTTGCAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261994.9
ENST00000614630.4
CDS CAA 90 bp GTCACCCATTTTCTCCATGAGGACCACCAGCATGGTGGCATTTCCTaGGTAGGGCAGTTTGAGGACATGACAACGAAAATTCTTGTCAAA +
Preference number: 6 (lower is better)
Translates to: VTHFLHEDHQHGGIS*VGQFEDMTTKILVK
Trigger: TTTGACAAGAATTTTCGTTGTCATGTCCTCAAACTGCCCTACCAAGGAAATGCCACCATGCTGGTGGTCCTCATGGAGAAAATGGGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS CAA 72 bp TTTCTCCATGAGGACCACCAGCATGGTGGCATTTCCTaGGTAGGGCAGTTTGAGGACATGACAACGAAAATT +
Preference number: 6 (lower is better)
Translates to: FLHEDHQHGGIS*VGQFEDMTTKI
Trigger: AATTTTCGTTGTCATGTCCTCAAACTGCCCTACCAAGGAAATGCCACCATGCTGGTGGTCCTCATGGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS GCA 72 bp ACGAAAATTCTTGTCAAAGGTGGAGGCAAACTTGCCTaGACCGTACATCATGGGCACCTTAATGGTCTTGTA +
Preference number: 6 (lower is better)
Translates to: TKILVKGGGKLA*TVHHGHLNGLV
Trigger: TACAAGACCATTAAGGTGCCCATGATGTACGGTGCAGGCAAGTTTGCCTCCACCTTTGACAAGAATTTTCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS CCA 72 bp GTGGAAAGTGTCGACTTCGGTGAAGACAGGGTCAAATaGGGTCAACCATTTCCCTTTGAACAAGATGTAATC +
Preference number: 6 (lower is better)
Translates to: VESVDFGEDRVK*GQPFPFEQDVI
Trigger: GATTACATCTTGTTCAAAGGGAAATGGTTGACCCCATTTGACCCTGTCTTCACCGAAGTCGACACTTTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2
CDS TCA 72 bp TTTGTTAATGTAATGATTCATGAGCCTTTTGGCCTGTaGGGCATTGCGAAAATTCATAGGCACGCACTCTGT +
Preference number: 6 (lower is better)
Translates to: FVNVMIHEPFGL*GIAKIHRHALC
Trigger: ACAGAGTGCGTGCCTATGAATTTTCGCAATGCCTCACAGGCCAAAAGGCTCATGAATCATTACATTAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000261994.9
ENST00000393096.5
ENST00000554173.1
ENST00000554723.5
ENST00000614630.4
ENST00000616057.2