RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SERINC5 (Homo sapiens)

Ensembl gene IDs: ENSG00000164300

Ensembl transcript IDs: ENST00000502747.1, ENST00000507668.7, ENST00000509193.5, ENST00000512972.6, ENST00000513907.1, ENST00000632581.1

Found 356 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGAAGGAAGCGACGAGGGCCTTCTACCGGCCACACTCCCTTGCTTaGGCTTCCCTAAGCTGCTTTCTGCAGAGGAAAGGGCCAATCACG +
Preference number: 1 (lower is better)
Translates to: QKEATRAFYRPHSLA*ASLSCFLQRKGPIT
Trigger: CGTGATTGGCCCTTTCCTCTGCAGAAAGCAGCTTAGGGAAGCCCAAGCAAGGGAGTGTGGCCGGTAGAAGGCCCTCGTCGCTTCCTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR GCA 90 bp AGGGCCTTCTACCGGCCACACTCCCTTGCTTGGGCTTCCCTAAGCTaGTTTCTGCAGAGGAAAGGGCCAATCACGGCCAGCCAAGGAATA +
Preference number: 1 (lower is better)
Translates to: RAFYRPHSLAWASLS*FLQRKGPITASQGI
Trigger: TATTCCTTGGCTGGCCGTGATTGGCCCTTTCCTCTGCAGAAAGCAGCTTAGGGAAGCCCAAGCAAGGGAGTGTGGCCGGTAGAAGGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR CCA 90 bp AACCGGCAGAAGGGAACGGGATGTCACAAACCAGACTCACGCATCTaGAAAACGTTGTGTGGCTGGGCTGGCTCCAGAAGGAAGCGACGA +
Preference number: 1 (lower is better)
Translates to: NRQKGTGCHKPDSRI*KTLCGWAGSRRKRR
Trigger: TCGTCGCTTCCTTCTGGAGCCAGCCCAGCCACACAACGTTTTCCAGATGCGTGAGTCTGGTTTGTGACATCCCGTTCCCTTCTGCCGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR TCA 90 bp CAATCACGGCCAGCCAAGGAATACAAGGCCTTGTCAGCTGGACCTTaGCTGCGCGTAAGGTCAGTTTCTCAAATCACACCAGCTGGCAGC +
Preference number: 1 (lower is better)
Translates to: QSRPAKEYKALSAGP*LRVRSVSQITPAGS
Trigger: GCTGCCAGCTGGTGTGATTTGAGAAACTGACCTTACGCGCAGTCAAGGTCCAGCTGACAAGGCCTTGTATTCCTTGGCTGGCCGTGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR CCA 90 bp AAAGGGCCAATCACGGCCAGCCAAGGAATACAAGGCCTTGTCAGCTaGACCTTGACTGCGCGTAAGGTCAGTTTCTCAAATCACACCAGC +
Preference number: 1 (lower is better)
Translates to: KGPITASQGIQGLVS*TLTARKVSFSNHTS
Trigger: GCTGGTGTGATTTGAGAAACTGACCTTACGCGCAGTCAAGGTCCAGCTGACAAGGCCTTGTATTCCTTGGCTGGCCGTGATTGGCCCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR CCA 90 bp GAATCATGGCAGGAGGTGAAAGGCACTTCTTGCCGTAGGCCTCTCTaGCACTCCATCTTGTCTCTCTTCCCTGGAGAAAAGGCAAGCTGT +
Preference number: 1 (lower is better)
Translates to: ESWQEVKGTSCRRPL*HSILSLFPGEKASC
Trigger: ACAGCTTGCCTTTTCTCCAGGGAAGAGAGACAAGATGGAGTGCCAGAGAGGCCTACGGCAAGAAGTGCCTTTCACCTCCTGCCATGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512972.6
3UTR GCA 90 bp TTACAGGAAATAGCCTTCAGTAAATTCCACAAGCCAAGTGGCTACTaGATTGTCCCTGAAGAAGGAGGGCCCAGTGTTCTTTCTGGGTGT +
Preference number: 1 (lower is better)
Translates to: LQEIAFSKFHKPSGY*IVPEEGGPSVLSGC
Trigger: ACACCCAGAAAGAACACTGGGCCCTCCTTCTTCAGGGACAATGCAGTAGCCACTTGGCTTGTGGAATTTACTGAAGGCTATTTCCTGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR TCA 90 bp GATCCTCACTTACAGAGAGCTCGAGAAGATTCTTTCCACCCCGAATaGAATTCTAACAGGAGTTTCCACCAAGTAAACCTTTTCCCTGCC +
Preference number: 1 (lower is better)
Translates to: DPHLQRAREDSFHPE*NSNRSFHQVNLFPA
Trigger: GGCAGGGAAAAGGTTTACTTGGTGGAAACTCCTGTTAGAATTTCATTCGGGGTGGAAAGAATCTTCTCGAGCTCTCTGTAAGTGAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR GCA 90 bp ATCCTCACCTCAGAAATTCTCACATTAGCAAACCTACTCCAAGGATaGCAGCATGAACCTGAACGGTATGGTCACGTTACAGATCCAGAA +
Preference number: 1 (lower is better)
Translates to: ILTSEILTLANLLQG*QHEPERYGHVTDPE
Trigger: TTCTGGATCTGTAACGTGACCATACCGTTCAGGTTCATGCTGGCATCCTTGGAGTAGGTTTGCTAATGTGAGAATTTCTGAGGTGAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR GCA 90 bp GCATCATCTTGGGTAGCTGCCGAAAGTCACGTTTCTGTATTACTTTaGAAGTACGTATTTTGGAAATTCCTGTGCAGCGTGATCTCGGCT +
Preference number: 1 (lower is better)
Translates to: ASSWVAAESHVSVLL*KYVFWKFLCSVISA
Trigger: AGCCGAGATCACGCTGCACAGGAATTTCCAAAATACGTACTTGCAAAGTAATACAGAAACGTGACTTTCGGCAGCTACCCAAGATGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR GCA 90 bp TTTTCAGCTGAGAATAAAATTCAGAGCAACTGTAACTCTTCCTCTTaGATCAGACCAACCGGCAGAAGGGAACGGGATGTCACAAACCAG +
Preference number: 1 (lower is better)
Translates to: FSAENKIQSNCNSSS*IRPTGRRERDVTNQ
Trigger: CTGGTTTGTGACATCCCGTTCCCTTCTGCCGGTTGGTCTGATGCAAGAGGAAGAGTTACAGTTGCTCTGAATTTTATTCTCAGCTGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR TCA 90 bp TCAGTATTTAAAAAGCTAGACACAGTAAAGACGTGGTTGGGTTTCTaGAGGCTTATAATGGAAATAGTCTCTAGTCTCCAGTCAGGTAAC +
Preference number: 1 (lower is better)
Translates to: SVFKKLDTVKTWLGF*RLIMEIVSSLQSGN
Trigger: GTTACCTGACTGGAGACTAGAGACTATTTCCATTATAAGCCTTCAGAAACCCAACCACGTCTTTACTGTGTCTAGCTTTTTAAATACTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR TCA 90 bp CAACATAACTGGTATCCAGTTCCTAGGGGTAAGATATTTCAACCATaGTCAGTTTGGTTGAAAATTTCAATTCCTTTGGGACAAACTGGT +
Preference number: 1 (lower is better)
Translates to: QHNWYPVPRGKIFQP*SVWLKISIPLGQTG
Trigger: ACCAGTTTGTCCCAAAGGAATTGAAATTTTCAACCAAACTGATCATGGTTGAAATATCTTACCCCTAGGAACTGGATACCAGTTATGTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR TCA 90 bp ACGAGGGCCTTCTACCGGCCACACTCCCTTGCTTGGGCTTCCCTAAGCTGCTTTGGGACCCAGAAAAGATaGGACCTCGGGGAAGGGTGC +
Preference number: 2 (lower is better)
Translates to: TRAFYRPHSLAWASLSCFGTQKR*DLGEGC
Trigger: GCACCCTTCCCCGAGGTCTCATCTTTTCTGGGTCCC...AAAGCAGCTTAGGGAAGCCCAAGCAAGGGAGTGTGGCCGGTAGAAGGCCCTCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR CAA 90 bp CCAGAAGGAAGCGACGAGGGCCTTCTACCGGCCACACTCCCTTGCTaGGGCTTCCCTAAGCTGCTTTCTGCAGAGGAAAGGGCCAATCAC +
Preference number: 2 (lower is better)
Translates to: PEGSDEGLLPATLPC*GFPKLLSAEERANH
Trigger: GTGATTGGCCCTTTCCTCTGCAGAAAGCAGCTTAGGGAAGCCCAAGCAAGGGAGTGTGGCCGGTAGAAGGCCCTCGTCGCTTCCTTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR CCA 90 bp ACGAGGGCCTTCTACCGGCCACACTCCCTTGCTTGGGCTTCCCTAAGCTGCTTTGTCCTCAAAGCCCCCTaGGGACAAGGCTCTAAGAGG +
Preference number: 2 (lower is better)
Translates to: TRAFYRPHSLAWASLSCFVLKAP*GQGSKR
Trigger: CCTCTTAGAGCCTTGTCCCCAGGGGGCTTTGAGGAC...AAAGCAGCTTAGGGAAGCCCAAGCAAGGGAGTGTGGCCGGTAGAAGGCCCTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR CAA 90 bp AAGGGAACGGGATGTCACAAACCAGACTCACGCATCTGGAAAACGTaGTGTGGCTGGGCTGGCTCCAGAAGGAAGCGACGAGGGCCTTCT +
Preference number: 2 (lower is better)
Translates to: KGTGCHKPDSRIWKT*CGWAGSRRKRRGPS
Trigger: AGAAGGCCCTCGTCGCTTCCTTCTGGAGCCAGCCCAGCCACACAACGTTTTCCAGATGCGTGAGTCTGGTTTGTGACATCCCGTTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR TCA 90 bp ACGAGGGCCTTCTACCGGCCACACTCCCTTGCTTGGGCTTCCCTAAGCTGCTTTGCTGACCTCAACAACTaGAAGAGCAGTGCATGCAGC +
Preference number: 2 (lower is better)
Translates to: TRAFYRPHSLAWASLSCFADLNN*KSSACS
Trigger: GCTGCATGCACTGCTCTTTCAGTTGTTGAGGTCAGC...AAAGCAGCTTAGGGAAGCCCAAGCAAGGGAGTGTGGCCGGTAGAAGGCCCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR TCA 90 bp ACGAGGGCCTTCTACCGGCCACACTCCCTTGCTTGGGCTTCCCTAAGCTGCTTTTTGTCAGCTGGACCTTaGCTGCGCGTAAGGTCAGTT +
Preference number: 2 (lower is better)
Translates to: TRAFYRPHSLAWASLSCFLSAGP*LRVRSV
Trigger: AACTGACCTTACGCGCAGTCAAGGTCCAGCTGACAA...AAAGCAGCTTAGGGAAGCCCAAGCAAGGGAGTGTGGCCGGTAGAAGGCCCTCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR CAA 90 bp TGTGATGGGGCAAACCTGTGGTCTCAGCTACTTGGGAGGTGGTCCTaGAGCCCAGGAGGTCAAGCCTGCCATGAGTCAAGATCATGTCAC +
Preference number: 2 (lower is better)
Translates to: CDGANLWSQLLGRWS*SPGGQACHESRSCH
Trigger: GTGACATGATCTTGACTCATGGCAGGCTTGACCTCCTGGGCTCAAGGACCACCTCCCAAGTAGCTGAGACCACAGGTTTGCCCCATCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR CAA 90 bp CCAATCACGGCCAGCCAAGGAATACAAGGCCTTGTCAGCTGGACCTaGACTGCGCGTAAGGTCAGTTTCTCAAATCACACCAGCTGGCAG +
Preference number: 2 (lower is better)
Translates to: PITASQGIQGLVSWT*TARKVSFSNHTSWQ
Trigger: CTGCCAGCTGGTGTGATTTGAGAAACTGACCTTACGCGCAGTCAAGGTCCAGCTGACAAGGCCTTGTATTCCTTGGCTGGCCGTGATTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR GCA 90 bp TCTAAACATCTGTGTGAACAGCTCTCCAGTACTGTGAAGTCAAAGGCCCAACATCAGGGCGCCAGTCCCTaGCCCGGGGACACTGTTCAA +
Preference number: 2 (lower is better)
Translates to: SKHLCEQLSSTVKSKAQHQGASP*PGDTVQ
Trigger: TTGAACAGTGTCCCCGGGGCAGGGACTGGCGCCCTG...ATGTTGGGCCTTTGACTTCACAGTACTGGAGAGCTGTTCACACAGATGTTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR CCA 90 bp ACGAGGGCCTTCTACCGGCCACACTCCCTTGCTTGGGCTTCCCTAAGCTGCTTTACACTGTTCAAAAGATaGCACTTTCCAGGCTGTAGG +
Preference number: 2 (lower is better)
Translates to: TRAFYRPHSLAWASLSCFTLFKR*HFPGCR
Trigger: CCTACAGCCTGGAAAGTGCCATCTTTTGAACAGTGT...AAAGCAGCTTAGGGAAGCCCAAGCAAGGGAGTGTGGCCGGTAGAAGGCCCTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR TCA 90 bp AAAGAGAGAGAGAGAGAAAGGTCTAAACATCTGTGTGAACAGCTCTCCAGTACTAGGGGCCCTGCAGGCTaGGTCCTGTCCTCAAAGCCC +
Preference number: 2 (lower is better)
Translates to: KERERERSKHLCEQLSSTRGPAG*VLSSKP
Trigger: GGGCTTTGAGGACAGGACTCAGCCTGCAGGGCCCCT...AGTACTGGAGAGCTGTTCACACAGATGTTTAGACCTTTCTCTCTCTCTCTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR TCA 90 bp AGGTCTTACTTAGTTCAAGGTTTGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTTTGGGAGGTGGTCCTTaGGCCCAGGAGGTCAAGCCT +
Preference number: 2 (lower is better)
Translates to: RSYLVQGLSLLSCRLGPLLGGGP*AQEVKP
Trigger: AGGCTTGACCTCCTGGGCTCAAGGACCACCTCCCAA...AAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR CCA 90 bp ACGAGGGCCTTCTACCGGCCACACTCCCTTGCTTGGGCTTCCCTAAGCTGCTTTGAGGATGAGAATGACTaGCCCCACAAGATATTTTTA +
Preference number: 2 (lower is better)
Translates to: TRAFYRPHSLAWASLSCFEDEND*PHKIFL
Trigger: TAAAAATATCTTGTGGGGCCAGTCATTCTCATCCTC...AAAGCAGCTTAGGGAAGCCCAAGCAAGGGAGTGTGGCCGGTAGAAGGCCCTCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR CCA 90 bp AGGTCTTACTTAGTTCAAGGTTTGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTGTTGTGTGGCTGGGCTaGCTCCAGAAGGAAGCGACG +
Preference number: 2 (lower is better)
Translates to: RSYLVQGLSLLSCRLGPLVVWLG*LQKEAT
Trigger: CGTCGCTTCCTTCTGGAGCCAGCCCAGCCACACAAC...AAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR GCA 90 bp AATGAAACTAGTCACAATACTGCCCAGGCTCTTTACCTGCTTCCCCTCAGGGTGAACCTACTCCAAGGATaGCAGCATGAACCTGAACGG +
Preference number: 2 (lower is better)
Translates to: NETSHNTAQALYLLPLRVNLLQG*QHEPER
Trigger: CCGTTCAGGTTCATGCTGGCATCCTTGGAGTAGGTT...CACCCTGAGGGGAAGCAGGTAAAGAGCCTGGGCAGTATTGTGACTAGTTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR CAA 90 bp GCCTCTGCGCACCTCTTTTTAAGTATATTCGGCCACTTCCACACATaGCCTAACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACC +
Preference number: 2 (lower is better)
Translates to: ASAHLFLSIFGHFHT*PNKLLLVSVSEILT
Trigger: GGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGTTAGGCAATGTGTGGAAGTGGCCGAATATACTTAAAAAGAGGTGCGCAGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR TCA 90 bp AGGTCTTACTTAGTTCAAGGTTTGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTTTGAGCTCAGGAGTTTaGGACCAGCCTGGACAACCC +
Preference number: 2 (lower is better)
Translates to: RSYLVQGLSLLSCRLGPLLSSGV*DQPGQP
Trigger: GGGTTGTCCAGGCTGGTCTCAAACTCCTGAGCTCAA...AAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR GCA 90 bp AAAGAGAGAGAGAGAGAAAGGTCTAAACATCTGTGTGAACAGCTCTCCAGTACTAGGCAGAGGGTAGGCTaGGTGCAGTGGTTTACGCCT +
Preference number: 2 (lower is better)
Translates to: KERERERSKHLCEQLSSTRQRVG*VQWFTP
Trigger: AGGCGTAAACCACTGCACGCAGCCTACCCTCTGCCT...AGTACTGGAGAGCTGTTCACACAGATGTTTAGACCTTTCTCTCTCTCTCTCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR CCA 90 bp AATGAAACTAGTCACAATACTGCCCAGGCTCTTTACCTGCTTCCCCTCAGGGTGGATTCTGTTAGGCGCTaGGGACTCAAGATTTTGGCA +
Preference number: 2 (lower is better)
Translates to: NETSHNTAQALYLLPLRVDSVRR*GLKILA
Trigger: TGCCAAAATCTTGAGTCCCCAGCGCCTAACAGAATC...CACCCTGAGGGGAAGCAGGTAAAGAGCCTGGGCAGTATTGTGACTAGTTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR GCA 90 bp AGGTCTTACTTAGTTCAAGGTTTGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTAAGGCCCTAGGCCACTaGAACACAGCTACTGTGTGT +
Preference number: 2 (lower is better)
Translates to: RSYLVQGLSLLSCRLGPLKALGH*NTATVC
Trigger: ACACACAGTAGCTGTGTTGCAGTGGCCTAGGGCCTT...AAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR CCA 90 bp TCTAAACATCTGTGTGAACAGCTCTCCAGTACTGTGAAGTCAAAGGCCCAACATAGGTGGGGAACCACCTaGGGGGTGATCAGACAAATT +
Preference number: 2 (lower is better)
Translates to: SKHLCEQLSSTVKSKAQHRWGTT*GVIRQI
Trigger: AATTTGTCTGATCACCCCCCAGGTGGTTCCCCACCT...ATGTTGGGCCTTTGACTTCACAGTACTGGAGAGCTGTTCACACAGATGTTTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR CCA 90 bp AGGTCTTACTTAGTTCAAGGTTTGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTCCACACTCCCTTGCTTaGGCTTCCCTAAGCTGCTTT +
Preference number: 2 (lower is better)
Translates to: RSYLVQGLSLLSCRLGPLPHSLA*ASLSCF
Trigger: AAAGCAGCTTAGGGAAGCCCAAGCAAGGGAGTGTGG...AAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR TCA 90 bp TCTGACCAGCAGCTTCTGGGAATATACTCTTTAGGTCATGTACAAAAAGGTGTATGGTCTTGCAACTCCTaGCCTCAAGTGATCCGCCTG +
Preference number: 2 (lower is better)
Translates to: SDQQLLGIYSLGHVQKGVWSCNS*PQVIRL
Trigger: CAGGCGGATCACTTGAGGTCAGGAGTTGCAAGACCA...TACACCTTTTTGTACATGACCTAAAGAGTATATTCCCAGAAGCTGCTGGTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR TCA 90 bp AGGTCTTACTTAGTTCAAGGTTTGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTCTCCTGTCCCCTAACTaGTTCCTCAGGTTAGAACAC +
Preference number: 2 (lower is better)
Translates to: RSYLVQGLSLLSCRLGPLLLSPN*FLRLEH
Trigger: GTGTTCTAACCTGAGGAATCAGTTAGGGGACAGGAG...AAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR GCA 90 bp TCTGACCAGCAGCTTCTGGGAATATACTCTTTAGGTCATGTACAAAAAGGTGTACCCAGGCTCTTTACCTaGTTCCCCTCAGGGTGTTTC +
Preference number: 2 (lower is better)
Translates to: SDQQLLGIYSLGHVQKGVPRLFT*FPSGCF
Trigger: GAAACACCCTGAGGGGAAGCAGGTAAAGAGCCTGGG...TACACCTTTTTGTACATGACCTAAAGAGTATATTCCCAGAAGCTGCTGGTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR CAA 90 bp CCCAGTGTTCTTTCTGGGTGTGTAAGGTCTTACTTAGTTCAAGGTTaGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTTCGTTTCCAAGA +
Preference number: 2 (lower is better)
Translates to: PSVLSGCVRSYLVQG*SLLSCRLGPLSFPR
Trigger: TCTTGGAAACGAAAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCTTACACACCCAGAAAGAACACTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR GCA 90 bp TCTAAACATCTGTGTGAACAGCTCTCCAGTACTGTGAAGTCAAAGGCCCAACATCAGTTGAAAAGCAGGTaGCTCCTCTTGGACCCTATA +
Preference number: 2 (lower is better)
Translates to: SKHLCEQLSSTVKSKAQHQLKSR*LLLDPI
Trigger: TATAGGGTCCAAGAGGAGGCACCTGCTTTTCAACTG...ATGTTGGGCCTTTGACTTCACAGTACTGGAGAGCTGTTCACACAGATGTTTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR GCA 90 bp ATGAACCTGAACGGTATGGTCACGTTACAGATCCAGAACACAAAACGACTTCCGAAGCGCCGTACTTATTaGAGTAACTCGGATCAGGTA +
Preference number: 2 (lower is better)
Translates to: MNLNGMVTLQIQNTKRLPKRRTY*SNSDQV
Trigger: TACCTGATCCGAGTTACTGCAATAAGTACGGCGCTT...CGGAAGTCGTTTTGTGTTCTGGATCTGTAACGTGACCATACCGTTCAGGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR TCA 90 bp AAAGAGAGAGAGAGAGAAAGGTCTAAACATCTGTGTGAACAGCTCTCCAGTACTTCTGGTCAGTGTGTCTaGGATCCTCACCTCAGAAAT +
Preference number: 2 (lower is better)
Translates to: KERERERSKHLCEQLSSTSGQCV*DPHLRN
Trigger: ATTTCTGAGGTGAGGATCTCAGACACACTGACCAGA...AGTACTGGAGAGCTGTTCACACAGATGTTTAGACCTTTCTCTCTCTCTCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR TCA 90 bp AAAGAGAGAGAGAGAGAAAGGTCTAAACATCTGTGTGAACAGCTCTCCAGTACTATCCCTAAATGTGTCTaGCCAGCAGCTTCTGGGAAT +
Preference number: 2 (lower is better)
Translates to: KERERERSKHLCEQLSSTIPKCV*PAASGN
Trigger: ATTCCCAGAAGCTGCTGGTCAGACACATTTAGGGAT...AGTACTGGAGAGCTGTTCACACAGATGTTTAGACCTTTCTCTCTCTCTCTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR GCA 90 bp AGGTCTTACTTAGTTCAAGGTTTGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTATCATCTTGGGTAGCTaGCGAAAGTCACGTTTCTGT +
Preference number: 2 (lower is better)
Translates to: RSYLVQGLSLLSCRLGPLIILGS*RKSRFC
Trigger: ACAGAAACGTGACTTTCGGCAGCTACCCAAGATGAT...AAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR CCA 90 bp TCTAAACATCTGTGTGAACAGCTCTCCAGTACTGTGAAGTCAAAGGCCCAACATGGAAGTCAACATAACTaGTATCCAGTTCCTAGGGGT +
Preference number: 2 (lower is better)
Translates to: SKHLCEQLSSTVKSKAQHGSQHN*YPVPRG
Trigger: ACCCCTAGGAACTGGATACCAGTTATGTTGACTTCC...ATGTTGGGCCTTTGACTTCACAGTACTGGAGAGCTGTTCACACAGATGTTTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR CCA 90 bp CTTGTCTCTCTTCCCTGGAGAAAAGGCAAGCTGTATTCAATCATCTTTTCAATGCTTTCCTGTCGGAGTTaGGGCCAGAGATGTTTCCAT +
Preference number: 2 (lower is better)
Translates to: LVSLPWRKGKLYSIIFSMLSCRS*GQRCFH
Trigger: ATGGAAACATCTCTGGCCCCAACTCCGACAGGAAAG...CATTGAAAAGATGATTGAATACAGCTTGCCTTTTCTCCAGGGAAGAGAGACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512972.6
3UTR-3UTR TCA 90 bp AAATCCAGGAATGTTGACTCCTCACCTGAGTATTGTATATCACAATTAATAACCAGAGGCGGAAGTGAGTaGGAGGGGTCTGGATTCTGT +
Preference number: 2 (lower is better)
Translates to: KSRNVDSSPEYCISQLITRGGSE*EGSGFC
Trigger: ACAGAATCCAGACCCCTCTCACTCACTTCCGCCTCT...GGTTATTAATTGTGATATACAATACTCAGGTGAGGAGTCAACATTCCTGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR TCA 90 bp TCTGACCAGCAGCTTCTGGGAATATACTCTTTAGGTCATGTACAAAAAGGTGTAGAATCTTTTAACTGCTaGGTACAGAGCTCCTGCCCT +
Preference number: 2 (lower is better)
Translates to: SDQQLLGIYSLGHVQKGVESFNC*VQSSCP
Trigger: AGGGCAGGAGCTCTGTACTCAGCAGTTAAAAGATTC...TACACCTTTTTGTACATGACCTAAAGAGTATATTCCCAGAAGCTGCTGGTCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR GCA 90 bp AGGTCTTACTTAGTTCAAGGTTTGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTATGATAGCCCTCCATTaGTTAGGCAGAGAAAACATG +
Preference number: 2 (lower is better)
Translates to: RSYLVQGLSLLSCRLGPLMIALH*LGRENM
Trigger: CATGTTTTCTCTGCCTAAGCAATGGAGGGCTATCAT...AAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR CCA 90 bp AGGTCTTACTTAGTTCAAGGTTTGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTTGCAAGTACGTATTTTaGAAATTCCTGTGCAGCGTG +
Preference number: 2 (lower is better)
Translates to: RSYLVQGLSLLSCRLGPLCKYVF*KFLCSV
Trigger: CACGCTGCACAGGAATTTCCAAAATACGTACTTGCA...AAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR CCA 90 bp AGGTCTTACTTAGTTCAAGGTTTGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTCTTAAATACAGGCTCTaGAATTTCCTTCGCAGGAAG +
Preference number: 2 (lower is better)
Translates to: RSYLVQGLSLLSCRLGPLLKYRL*NFLRRK
Trigger: CTTCCTGCGAAGGAAATTCCAGAGCCTGTATTTAAG...AAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR CCA 90 bp AAAGAGAGAGAGAGAGAAAGGTCTAAACATCTGTGTGAACAGCTCTCCAGTACTGCCCAGTGTTCTTTCTaGGTGTGTAAGGTCTTACTT +
Preference number: 2 (lower is better)
Translates to: KERERERSKHLCEQLSSTAQCSF*VCKVLL
Trigger: AAGTAAGACCTTACACACCCAGAAAGAACACTGGGC...AGTACTGGAGAGCTGTTCACACAGATGTTTAGACCTTTCTCTCTCTCTCTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR CAA 90 bp CCTTTTCCCTGCCTGAATACATCAACACTGAAAATAGGCATCATCTaGGGTAGCTGCCGAAAGTCACGTTTCTGTATTACTTTGCAAGTA +
Preference number: 2 (lower is better)
Translates to: PFPCLNTSTLKIGII*GSCRKSRFCITLQV
Trigger: TACTTGCAAAGTAATACAGAAACGTGACTTTCGGCAGCTACCCAAGATGATGCCTATTTTCAGTGTTGATGTATTCAGGCAGGGAAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR TCA 90 bp AAATCCAGGAATGTTGACTCCTCACCTGAGTATTGTATATCACAATTAATAACCTCTAAGAGGCGGAAGTaGGTGAGAGGGGTCTGGATT +
Preference number: 2 (lower is better)
Translates to: KSRNVDSSPEYCISQLITSKRRK*VRGVWI
Trigger: AATCCAGACCCCTCTCACTCACTTCCGCCTCTTAGA...GGTTATTAATTGTGATATACAATACTCAGGTGAGGAGTCAACATTCCTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR CCA 90 bp AAATCCAGGAATGTTGACTCCTCACCTGAGTATTGTATATCACAATTAATAACCCCAGACTCACGCATCTaGAAAACGTTGTGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: KSRNVDSSPEYCISQLITPDSRI*KTLCGW
Trigger: CCAGCCACACAACGTTTTCCAGATGCGTGAGTCTGG...GGTTATTAATTGTGATATACAATACTCAGGTGAGGAGTCAACATTCCTGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR CCA 90 bp TCTAAACATCTGTGTGAACAGCTCTCCAGTACTGTGAAGTCAAAGGCCCAACATATAAACAATGTTGTATaGAAACAGAACCCCAAAACC +
Preference number: 2 (lower is better)
Translates to: SKHLCEQLSSTVKSKAQHINNVV*KQNPKT
Trigger: GGTTTTGGGGTTCTGTTTCCATACAACATTGTTTAT...ATGTTGGGCCTTTGACTTCACAGTACTGGAGAGCTGTTCACACAGATGTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR CAA 90 bp TCTGCATTGATAGTCCCTCAATCCTCAGATACATCCACATCTGTTTaGTTCATCCAGATACACGTGCTAACATTTTCAGCTGAGAATAAA +
Preference number: 2 (lower is better)
Translates to: SALIVPQSSDTSTSV*FIQIHVLTFSAENK
Trigger: TTTATTCTCAGCTGAAAATGTTAGCACGTGTATCTGGATGAACAAAACAGATGTGGATGTATCTGAGGATTGAGGGACTATCAATGCAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR CCA 90 bp AAATCCAGGAATGTTGACTCCTCACCTGAGTATTGTATATCACAATTAATAACCATTATTACAAAGATGTaGGACCCAGAAAAGATGAGA +
Preference number: 2 (lower is better)
Translates to: KSRNVDSSPEYCISQLITIITKM*DPEKMR
Trigger: TCTCATCTTTTCTGGGTCCCACATCTTTGTAATAAT...GGTTATTAATTGTGATATACAATACTCAGGTGAGGAGTCAACATTCCTGGATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR CCA 72 bp GCGACGAGGGCCTTCTACCGGCCACACTCCCTTGCTTaGGCTTCCCTAAGCTGCTTTCTGCAGAGGAAAGGG +
Preference number: 3 (lower is better)
Translates to: ATRAFYRPHSLA*ASLSCFLQRKG
Trigger: CCCTTTCCTCTGCAGAAAGCAGCTTAGGGAAGCCCAAGCAAGGGAGTGTGGCCGGTAGAAGGCCCTCGTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR CCA 72 bp AGACTCACGCATCTGGAAAACGTTGTGTGGCTGGGCTaGCTCCAGAAGGAAGCGACGAGGGCCTTCTACCGG +
Preference number: 3 (lower is better)
Translates to: RLTHLENVVWLG*LQKEATRAFYR
Trigger: CCGGTAGAAGGCCCTCGTCGCTTCCTTCTGGAGCCAGCCCAGCCACACAACGTTTTCCAGATGCGTGAGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR TCA 72 bp GAGGTGGTCCTTGAGCCCAGGAGGTCAAGCCTGCCATaGGTCAAGATCATGTCACTGCACTCCAGCGTGGCT +
Preference number: 3 (lower is better)
Translates to: EVVLEPRRSSLP*VKIMSLHSSVA
Trigger: AGCCACGCTGGAGTGCAGTGACATGATCTTGACTCATGGCAGGCTTGACCTCCTGGGCTCAAGGACCACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR CCA 72 bp ACTGCGCGTAAGGTCAGTTTCTCAAATCACACCAGCTaGCAGCCAGACCCAGCCGAGAGGACAAAGCAAGGG +
Preference number: 3 (lower is better)
Translates to: TARKVSFSNHTS*QPDPAERTKQG
Trigger: CCCTTGCTTTGTCCTCTCGGCTGGGTCTGGCTGCCAGCTGGTGTGATTTGAGAAACTGACCTTACGCGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR CCA 72 bp AAACCAGACTCACGCATCTGGAAAACGTTGTGTGGCTaGGCTGGCTCCAGAAGGAAGCGACGAGGGCCTTCT +
Preference number: 3 (lower is better)
Translates to: KPDSRIWKTLCG*AGSRRKRRGPS
Trigger: AGAAGGCCCTCGTCGCTTCCTTCTGGAGCCAGCCCAGCCACACAACGTTTTCCAGATGCGTGAGTCTGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR TCA 72 bp CAAACCTGTGGTCTCAGCTACTTGGGAGGTGGTCCTTaGGCCCAGGAGGTCAAGCCTGCCATGAGTCAAGAT +
Preference number: 3 (lower is better)
Translates to: QTCGLSYLGGGP*AQEVKPAMSQD
Trigger: ATCTTGACTCATGGCAGGCTTGACCTCCTGGGCTCAAGGACCACCTCCCAAGTAGCTGAGACCACAGGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR CCA 72 bp TGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTaGGGAGGCCTCAGAATCATGGCAGGAGGTGAAAGG +
Preference number: 3 (lower is better)
Translates to: WSPFRFLRVPHG*GGLRIMAGGER
Trigger: CCTTTCACCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
3UTR CCA 72 bp CCACCAGCATTTTGGCACACAGAAGCCCAGCTTAGGTaGCACTCAATTCTGCCCAACTCATACAGTAGGGCA +
Preference number: 3 (lower is better)
Translates to: PPAFWHTEAQLR*HSILPNSYSRA
Trigger: TGCCCTACTGTATGAGTTGGGCAGAATTGAGTGCCACCTAAGCTGGGCTTCTGTGTGCCAAAATGCTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR CAA 90 bp AATGAAACTAGTCACAATACTGCCCAGGCTCTTTACCTGCTTCCCCTCAGGGTGAGCAGGTGCCTCCTCTaGGACCCTATAAATACCAGG +
Preference number: 3 (lower is better)
Translates to: NETSHNTAQALYLLPLRVSRCLL*DPINTR
Trigger: CCTGGTATTTATAGGGTCCAAGAGGAGGCACCTGCT...CACCCTGAGGGGAAGCAGGTAAAGAGCCTGGGCAGTATTGTGACTAGTTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR CAA 90 bp AAAGAGAGAGAGAGAGAAAGGTCTAAACATCTGTGTGAACAGCTCTCCAGTACTCTTGGGAGGTGGTCCTaGAGCCCAGGAGGTCAAGCC +
Preference number: 3 (lower is better)
Translates to: KERERERSKHLCEQLSSTLGRWS*SPGGQA
Trigger: GGCTTGACCTCCTGGGCTCAAGGACCACCTCCCAAG...AGTACTGGAGAGCTGTTCACACAGATGTTTAGACCTTTCTCTCTCTCTCTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR TCA 72 bp CCAGCCAAGGAATACAAGGCCTTGTCAGCTGGACCTTaGCTGCGCGTAAGGTCAGTTTCTCAAATCACACCA +
Preference number: 3 (lower is better)
Translates to: PAKEYKALSAGP*LRVRSVSQITP
Trigger: TGGTGTGATTTGAGAAACTGACCTTACGCGCAGTCAAGGTCCAGCTGACAAGGCCTTGTATTCCTTGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR CCA 72 bp ATCACGGCCAGCCAAGGAATACAAGGCCTTGTCAGCTaGACCTTGACTGCGCGTAAGGTCAGTTTCTCAAAT +
Preference number: 3 (lower is better)
Translates to: ITASQGIQGLVS*TLTARKVSFSN
Trigger: ATTTGAGAAACTGACCTTACGCGCAGTCAAGGTCCAGCTGACAAGGCCTTGTATTCCTTGGCTGGCCGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR CAA 90 bp TCTAAACATCTGTGTGAACAGCTCTCCAGTACTGTGAAGTCAAAGGCCCAACATGCCACACTCCCTTGCTaGGGCTTCCCTAAGCTGCTT +
Preference number: 3 (lower is better)
Translates to: SKHLCEQLSSTVKSKAQHATLPC*GFPKLL
Trigger: AAGCAGCTTAGGGAAGCCCAAGCAAGGGAGTGTGGC...ATGTTGGGCCTTTGACTTCACAGTACTGGAGAGCTGTTCACACAGATGTTTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR CAA 90 bp TCTAAACATCTGTGTGAACAGCTCTCCAGTACTGTGAAGTCAAAGGCCCAACATCTTGTCAGCTGGACCTaGACTGCGCGTAAGGTCAGT +
Preference number: 3 (lower is better)
Translates to: SKHLCEQLSSTVKSKAQHLVSWT*TARKVS
Trigger: ACTGACCTTACGCGCAGTCAAGGTCCAGCTGACAAG...ATGTTGGGCCTTTGACTTCACAGTACTGGAGAGCTGTTCACACAGATGTTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR TCA 72 bp GGTCTAAACATCTGTGTGAACAGCTCTCCAGTACTGTaGAGTCAAAGGCCCAACATTACAGAGCGCACCTCT +
Preference number: 3 (lower is better)
Translates to: GLNICVNSSPVL*SQRPNITERTS
Trigger: AGAGGTGCGCTCTGTAATGTTGGGCCTTTGACTTCACAGTACTGGAGAGCTGTTCACACAGATGTTTAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR CCA 72 bp TCGGCCACTTCCACACATTGCCTAACAAGCTTCTTCTaGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTC +
Preference number: 3 (lower is better)
Translates to: SATSTHCLTSFF*SVCLRSSPQKF
Trigger: GAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGTTAGGCAATGTGTGGAAGTGGCCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR CAA 90 bp AATGAAACTAGTCACAATACTGCCCAGGCTCTTTACCTGCTTCCCCTCAGGGTGGCCCCAAATTCTGTTTaGGCAAAAACATGCAGAAGG +
Preference number: 3 (lower is better)
Translates to: NETSHNTAQALYLLPLRVAPNSV*AKTCRR
Trigger: CCTTCTGCATGTTTTTGCCAAAACAGAATTTGGGGC...CACCCTGAGGGGAAGCAGGTAAAGAGCCTGGGCAGTATTGTGACTAGTTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR GCA 72 bp GAGAATAAAATTCAGAGCAACTGTAACTCTTCCTCTTaGATCAGACCAACCGGCAGAAGGGAACGGGATGTC +
Preference number: 3 (lower is better)
Translates to: ENKIQSNCNSSS*IRPTGRRERDV
Trigger: GACATCCCGTTCCCTTCTGCCGGTTGGTCTGATGCAAGAGGAAGAGTTACAGTTGCTCTGAATTTTATTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR CAA 90 bp TGCCTAACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCAATGATAGCCCTCCATaGCTTAGGCAGAGAAAACAT +
Preference number: 3 (lower is better)
Translates to: CLTSFFWSVCLRSSPQKFNDSPP*LRQRKH
Trigger: ATGTTTTCTCTGCCTAAGCAATGGAGGGCTATCATT...GAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGTTAGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR GCA 72 bp TCAGAAATTCTCACATTAGCAAACCTACTCCAAGGATaGCAGCATGAACCTGAACGGTATGGTCACGTTACA +
Preference number: 3 (lower is better)
Translates to: SEILTLANLLQG*QHEPERYGHVT
Trigger: TGTAACGTGACCATACCGTTCAGGTTCATGCTGGCATCCTTGGAGTAGGTTTGCTAATGTGAGAATTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR GCA 72 bp TGGGTAGCTGCCGAAAGTCACGTTTCTGTATTACTTTaGAAGTACGTATTTTGGAAATTCCTGTGCAGCGTG +
Preference number: 3 (lower is better)
Translates to: WVAAESHVSVLL*KYVFWKFLCSV
Trigger: CACGCTGCACAGGAATTTCCAAAATACGTACTTGCAAAGTAATACAGAAACGTGACTTTCGGCAGCTACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR CAA 90 bp AGGTCTTACTTAGTTCAAGGTTTGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTTTGCAAGTACGTATTTaGGAAATTCCTGTGCAGCGT +
Preference number: 3 (lower is better)
Translates to: RSYLVQGLSLLSCRLGPLLQVRI*EIPVQR
Trigger: ACGCTGCACAGGAATTTCCAAAATACGTACTTGCAA...AAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR CAA 90 bp TCTAAACATCTGTGTGAACAGCTCTCCAGTACTGTGAAGTCAAAGGCCCAACATACATCCACATCTGTTTaGTTCATCCAGATACACGTG +
Preference number: 3 (lower is better)
Translates to: SKHLCEQLSSTVKSKAQHTSTSV*FIQIHV
Trigger: CACGTGTATCTGGATGAACAAAACAGATGTGGATGT...ATGTTGGGCCTTTGACTTCACAGTACTGGAGAGCTGTTCACACAGATGTTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR CAA 90 bp AAAGAGAGAGAGAGAGAAAGGTCTAAACATCTGTGTGAACAGCTCTCCAGTACTACACGGCTTTTCATTTaGCGACTCCAGATGAATCTT +
Preference number: 3 (lower is better)
Translates to: KERERERSKHLCEQLSSTTRLFI*RLQMNL
Trigger: AAGATTCATCTGGAGTCGCAAAATGAAAAGCCGTGT...AGTACTGGAGAGCTGTTCACACAGATGTTTAGACCTTTCTCTCTCTCTCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR TCA 72 bp AAAAAGCTAGACACAGTAAAGACGTGGTTGGGTTTCTaGAGGCTTATAATGGAAATAGTCTCTAGTCTCCAG +
Preference number: 3 (lower is better)
Translates to: KKLDTVKTWLGF*RLIMEIVSSLQ
Trigger: CTGGAGACTAGAGACTATTTCCATTATAAGCCTTCAGAAACCCAACCACGTCTTTACTGTGTCTAGCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR GCA 72 bp CATGTGAATAACACCATAAATAAGCGCCGTACTTATTaGAGTAACTCGGATCAGGTAGTGATAATAAGGTGG +
Preference number: 3 (lower is better)
Translates to: HVNNTINKRRTY*SNSDQVVIIRW
Trigger: CCACCTTATTATCACTACCTGATCCGAGTTACTGCAATAAGTACGGCGCTTATTTATGGTGTTATTCACATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR GCA 72 bp ACATCAACACTGAAAATAGGCATCATCTTGGGTAGCTaGCGAAAGTCACGTTTCTGTATTACTTTGCAAGTA +
Preference number: 3 (lower is better)
Translates to: TSTLKIGIILGS*RKSRFCITLQV
Trigger: TACTTGCAAAGTAATACAGAAACGTGACTTTCGGCAGCTACCCAAGATGATGCCTATTTTCAGTGTTGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR-3UTR CAA 90 bp AAATCCAGGAATGTTGACTCCTCACCTGAGTATTGTATATCACAATTAATAACCTGGGGACTCAAGATTTaGGCATGTTTTTCTATTCCG +
Preference number: 3 (lower is better)
Translates to: KSRNVDSSPEYCISQLITWGLKI*ACFSIP
Trigger: CGGAATAGAAAAACATGCCAAAATCTTGAGTCCCCA...GGTTATTAATTGTGATATACAATACTCAGGTGAGGAGTCAACATTCCTGGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp ACGAGGGCCTTCTACCGGCCACACTCCCTTGCTTGGGCTTCCCTAAGCTGCTTTCATCGCGGCGGCCAATaGCGAAGGCGCGCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: TRAFYRPHSLAWASLSCFHRGGQ*RRRARW
Trigger: CCAGCGAGCGCGCCTTCGGCATTGGCCGCCGCGATG...AAAGCAGCTTAGGGAAGCCCAAGCAAGGGAGTGTGGCCGGTAGAAGGCCCTCGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp CAAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGTGGCCCGCACAGCACTaGGCTGACATCGCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: QMESVQVSQSSTWLGRPQWPAQH*ADIAAA
Trigger: GGCCGCCGCGATGTCAGCTCAGTGCTGTGCGGGCCA...CTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR TCA 90 bp GGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCCCGCACAGCACTaGGCTGACATCGCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: GVRSGFSEFHMAGEASESWPAQH*ADIAAA
Trigger: GGCCGCCGCGATGTCAGCTCAGTGCTGTGCGGGCCA...TGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR GCA 90 bp AAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAACGGGCCCTCCTGGCTaGCTCGCGCCTCGAGCGCTG +
Preference number: 4 (lower is better)
Translates to: KWSPFRFLRVPHGWGGLRTGPPG*LAPRAL
Trigger: CAGCGCTCGAGGCGCGAGGCAGCCAGGAGGGCCCGT...TCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR TCA 90 bp ATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATTGGCCCGCACAGCACTaGGCTGACATCGCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: MESVQVSQSSTWLGRPQNWPAQH*ADIAAA
Trigger: GGCCGCCGCGATGTCAGCTCAGTGCTGTGCGGGCCA...ATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR TCA 90 bp ACGAGGGCCTTCTACCGGCCACACTCCCTTGCTTGGGCTTCCCTAAGCTGCTTTGCCGCAGCTCACACTTaGACGAAGATCAGCCTCGGC +
Preference number: 4 (lower is better)
Translates to: TRAFYRPHSLAWASLSCFAAAHT*TKISLG
Trigger: GCCGAGGCTGATCTTCGTTCAAGTGTGAGCTGCGGC...AAAGCAGCTTAGGGAAGCCCAAGCAAGGGAGTGTGGCCGGTAGAAGGCCCTCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp CAGGAGGTGAAAGGCACTTCTTGCCGTAGGCCTCTCTGGCACTCCATCTTGTCTCGCACAGCACTGAGCTaGCATCGCGGCGGCCAATGC +
Preference number: 4 (lower is better)
Translates to: QEVKGTSCRRPLWHSILSRTALS*HRGGQC
Trigger: GCATTGGCCGCCGCGATGTCAGCTCAGTGCTGTGCG...AGACAAGATGGAGTGCCAGAGAGGCCTACGGCAAGAAGTGCCTTTCACCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512972.6
CDS-3UTR TCA 90 bp CAAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGCGCACAGCACTGAGCTaGCATCGCGGCGGCCAATGC +
Preference number: 4 (lower is better)
Translates to: QMESVQVSQSSTWLGRPQRTALS*HRGGQC
Trigger: GCATTGGCCGCCGCGATGTCAGCTCAGTGCTGTGCG...CTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
3UTR CAA 72 bp AGCGACGAGGGCCTTCTACCGGCCACACTCCCTTGCTaGGGCTTCCCTAAGCTGCTTTCTGCAGAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: SDEGLLPATLPC*GFPKLLSAEER
Trigger: CCTTTCCTCTGCAGAAAGCAGCTTAGGGAAGCCCAAGCAAGGGAGTGTGGCCGGTAGAAGGCCCTCGTCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp AATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAACGCACAGCACTGAGCTaGCATCGCGGCGGCCAATGC +
Preference number: 4 (lower is better)
Translates to: NGVRSGFSEFHMAGEASERTALS*HRGGQC
Trigger: GCATTGGCCGCCGCGATGTCAGCTCAGTGCTGTGCG...TTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR GCA 90 bp CAAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGCGGGTGCTGAGGGACTaGCGAATCCTGGGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: QMESVQVSQSSTWLGRPQRVLRD*RILGQQ
Trigger: TTGCTGCCCCAGGATTCGGCAGTCCCTCAGCACCCG...CTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR TCA 90 bp CCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCAGGAGCTGGATGCCAATaGAGAGGAAGCCTCCGACGG +
Preference number: 4 (lower is better)
Translates to: PFRFLRVPHGWGGLRIMAGAGCQ*RGSLRR
Trigger: CCGTCGGAGGCTTCCTCTTCATTGGCATCCAGCTCC...TGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR GCA 90 bp CTTGATGTCTTGCAAATGAAGGAGCCAAATGGAGTCCGTTCAGGTTTCTCAGAGACGGGCCCTCCTGGCTaGCTCGCGCCTCGAGCGCTG +
Preference number: 4 (lower is better)
Translates to: LDVLQMKEPNGVRSGFSETGPPG*LAPRAL
Trigger: CAGCGCTCGAGGCGCGAGGCAGCCAGGAGGGCCCGT...CTCTGAGAAACCTGAACGGACTCCATTTGGCTCCTTCATTTGCAAGACATCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR GCA 90 bp AAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGACGGGTGCTGAGGGACTaGCGAATCCTGGGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: KWSPFRFLRVPHGWGGLRRVLRD*RILGQQ
Trigger: TTGCTGCCCCAGGATTCGGCAGTCCCTCAGCACCCG...TCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR TCA 90 bp ATGAACCTGAACGGTATGGTCACGTTACAGATCCAGAACACAAAACGACTTCCGTGGCCCGCACAGCACTaGGCTGACATCGCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: MNLNGMVTLQIQNTKRLPWPAQH*ADIAAA
Trigger: GGCCGCCGCGATGTCAGCTCAGTGCTGTGCGGGCCA...CGGAAGTCGTTTTGTGTTCTGGATCTGTAACGTGACCATACCGTTCAGGTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp AATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAAGGAGCTGGATGCCAATaGAGAGGAAGCCTCCGACGG +
Preference number: 4 (lower is better)
Translates to: NGVRSGFSEFHMAGEASEGAGCQ*RGSLRR
Trigger: CCGTCGGAGGCTTCCTCTTCATTGGCATCCAGCTCC...TTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR GCA 90 bp ACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCTCACATACGGGCCCTCCTGGCTaGCTCGCGCCTCGAGCGCTG +
Preference number: 4 (lower is better)
Translates to: TSFFWSVCLRSSPQKFSHTGPPG*LAPRAL
Trigger: CAGCGCTCGAGGCGCGAGGCAGCCAGGAGGGCCCGT...ATGTGAGAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp CAAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGCTCCAATTCAGGAGCTaGGTATCGCCCCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: QMESVQVSQSSTWLGRPQLQFRS*VSPLQS
Trigger: GCTCTGCAGGGGCGATACGCAGCTCCTGAATTGGAG...CTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR GCA 90 bp AAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGACCCTCCTTCCCCGGCTaGTGCTCTTCAGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: KWSPFRFLRVPHGWGGLRPSFPG*CSSVSS
Trigger: AGAGGACACTGAAGAGCAGCAGCCGGGGAAGGAGGG...TCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR GCA 90 bp TTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCAGGACCCTCCTTCCCCGGCTaGTGCTCTTCAGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: FRFLRVPHGWGGLRIMAGPSFPG*CSSVSS
Trigger: AGAGGACACTGAAGAGCAGCAGCCGGGGAAGGAGGG...TCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CCA 90 bp CAAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGGGGACTGCCGAATCCTaGGGCAGCAATCACAGCAGA +
Preference number: 4 (lower is better)
Translates to: QMESVQVSQSSTWLGRPQGTAES*GSNHSR
Trigger: TCTGCTGTGATTGCTGCCCCAGGATTCGGCAGTCCC...CTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CCA 90 bp GTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCAGGGGGACTGCCGAATCCTaGGGCAGCAATCACAGCAGA +
Preference number: 4 (lower is better)
Translates to: VQVSQSSTWLGRPQNHGRGTAES*GSNHSR
Trigger: TCTGCTGTGATTGCTGCCCCAGGATTCGGCAGTCCC...CCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CCA 90 bp ACGAGGGCCTTCTACCGGCCACACTCCCTTGCTTGGGCTTCCCTAAGCTGCTTTACGAGCAGGAGGAGCTaGATGCCAATGAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: TRAFYRPHSLAWASLSCFTSRRS*MPMKRK
Trigger: CTTCCTCTTCATTGGCATCCAGCTCCTCCTGCTCGT...AAAGCAGCTTAGGGAAGCCCAAGCAAGGGAGTGTGGCCGGTAGAAGGCCCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp ACGAGGGCCTTCTACCGGCCACACTCCCTTGCTTGGGCTTCCCTAAGCTGCTTTAGGTGGGGAACCACCTaGGGGGTGATCAGACAAATT +
Preference number: 4 (lower is better)
Translates to: TRAFYRPHSLAWASLSCFRWGTT*GVIRQI
Trigger: AATTTGTCTGATCACCCCCCAGGTGGTTCCCCACCT...AAAGCAGCTTAGGGAAGCCCAAGCAAGGGAGTGTGGCCGGTAGAAGGCCCTCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp ACGAGGGCCTTCTACCGGCCACACTCCCTTGCTTGGGCTTCCCTAAGCTGCTTTGAAGCCCAGCTTAGGTaGCACTCAATTCTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: TRAFYRPHSLAWASLSCFEAQLR*HSILPN
Trigger: GTTGGGCAGAATTGAGTGCCACCTAAGCTGGGCTTC...AAAGCAGCTTAGGGAAGCCCAAGCAAGGGAGTGTGGCCGGTAGAAGGCCCTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp ACGAGGGCCTTCTACCGGCCACACTCCCTTGCTTGGGCTTCCCTAAGCTGCTTTCTCCTGTCCCCTAACTaGTTCCTCAGGTTAGAACAC +
Preference number: 4 (lower is better)
Translates to: TRAFYRPHSLAWASLSCFLLSPN*FLRLEH
Trigger: GTGTTCTAACCTGAGGAATCAGTTAGGGGACAGGAG...AAAGCAGCTTAGGGAAGCCCAAGCAAGGGAGTGTGGCCGGTAGAAGGCCCTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp TCTAAACATCTGTGTGAACAGCTCTCCAGTACTGTGAAGTCAAAGGCCCAACATCGCAGCCCCACTCCCTaGGCCCATTCCTGGCCCACG +
Preference number: 4 (lower is better)
Translates to: SKHLCEQLSSTVKSKAQHRSPTP*AHSWPT
Trigger: CGTGGGCCAGGAATGGGCTCAGGGAGTGGGGCTGCG...ATGTTGGGCCTTTGACTTCACAGTACTGGAGAGCTGTTCACACAGATGTTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp AATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAAGCTGCGTATCGCCCCTaGAGAGCGTCAGAACTCGAT +
Preference number: 4 (lower is better)
Translates to: NGVRSGFSEFHMAGEASEAAYRP*RASELD
Trigger: ATCGAGTTCTGACGCTCTGCAGGGGCGATACGCAGC...TTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR GCA 90 bp AGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCTGCGTATCGCCCCTaGAGAGCGTCAGAACTCGAT +
Preference number: 4 (lower is better)
Translates to: SPFRFLRVPHGWGGLRIMAAYRP*RASELD
Trigger: ATCGAGTTCTGACGCTCTGCAGGGGCGATACGCAGC...CATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR GCA 90 bp AAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAGCTGCGTATCGCCCCTaGAGAGCGTCAGAACTCGAT +
Preference number: 4 (lower is better)
Translates to: KWSPFRFLRVPHGWGGLRAAYRP*RASELD
Trigger: ATCGAGTTCTGACGCTCTGCAGGGGCGATACGCAGC...TCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR GCA 90 bp AAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGATCCTTCCCCGGCTGCTaGTCTTCAGTGTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: KWSPFRFLRVPHGWGGLRSFPGC*SSVSSP
Trigger: TGGAGAGGACACTGAAGAGCAGCAGCCGGGGAAGGA...TCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR GCA 90 bp AGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGTCCTTCCCCGGCTGCTaGTCTTCAGTGTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SPFRFLRVPHGWGGLRIMSFPGC*SSVSSP
Trigger: TGGAGAGGACACTGAAGAGCAGCAGCCGGGGAAGGA...CATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR TCA 90 bp CCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCAAATGAAGAAAGCTCCTaGGCACATGGCCCCCAACAG +
Preference number: 4 (lower is better)
Translates to: PFRFLRVPHGWGGLRIMANEESS*AHGPQQ
Trigger: CTGTTGGGGGCCATGTGCTCAGGAGCTTTCTTCATT...TGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR TCA 90 bp CAAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGTTTGCTGGACAGAGCTaGGAAGGTGAGGTAGGTGAC +
Preference number: 4 (lower is better)
Translates to: QMESVQVSQSSTWLGRPQFAGQS*EGEVGD
Trigger: GTCACCTACCTCACCTTCTCAGCTCTGTCCAGCAAA...CTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR TCA 90 bp AATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAAGGCAAGAGAATCGCTTaGCATCTGGGAGGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: NGVRSGFSEFHMAGEASEGKRIA*HLGGGG
Trigger: ACCTCCACCTCCCAGATGTCAAGCGATTCTCTTGCC...TTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632581.1
CDS-3UTR GCA 90 bp TGGCAGGAGGTGAAAGGCACTTCTTGCCGTAGGCCTCTCTGGCACTCCATCTTGGTTACTGGCTGTGCCTaGTGTCCAGTTCTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: WQEVKGTSCRRPLWHSILVTGCA*CPVLVP
Trigger: TGGAACAAGAACTGGACAGCAGGCACAGCCAGTAAC...CAAGATGGAGTGCCAGAGAGGCCTACGGCAAGAAGTGCCTTTCACCTCCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512972.6
CDS-3UTR CCA 90 bp CAAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGACCACAGCTTGTTACTaGCTGTGCCTGCTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: QMESVQVSQSSTWLGRPQTTACY*LCLLSS
Trigger: ACTGGACAGCAGGCACAGCCAGTAACAAGCTGTGGT...CTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CCA 90 bp CAAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGTGTGGCTGTCGATTTTaGACCCAGGGTGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: QMESVQVSQSSTWLGRPQCGCRF*TQGEMA
Trigger: AGCCATCTCACCCTGGGTCCAAAATCGACAGCCACA...CTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CCA 90 bp AAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGATGCCGTAGGCCTCTCTaGCACTCCATCTTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: KWSPFRFLRVPHGWGGLRCRRPL*HSILSL
Trigger: GAGAGACAAGATGGAGTGCCAGAGAGGCCTACGGCA...TCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512972.6
CDS-3UTR CCA 90 bp CAAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAGAGTTCCACATGGCTaGGGAGGCCTCAGAATCATG +
Preference number: 4 (lower is better)
Translates to: QMESVQVSQSSTWLGRPQRVPHG*GGLRIM
Trigger: CATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCT...CTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CCA 90 bp GGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCAAGAGTTCCACATGGCTaGGGAGGCCTCAGAATCATG +
Preference number: 4 (lower is better)
Translates to: GVRSGFSEFHMAGEASESRVPHG*GGLRIM
Trigger: CATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCT...TGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CCA 90 bp GGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATCTCAGAGTTCCACATaGCTGGGGAGGCCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: GVRSGFSEFHMAGEASESSQSST*LGRPQN
Trigger: ATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGA...TGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CCA 90 bp CCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCAGAATCGCTTGACATCTaGGAGGTGGAGGTTGCAGTG +
Preference number: 4 (lower is better)
Translates to: PFRFLRVPHGWGGLRIMAESLDI*EVEVAV
Trigger: CACTGCAACCTCCACCTCCCAGATGTCAAGCGATTC...TGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632581.1
CDS-3UTR TCA 90 bp AGGTCTTACTTAGTTCAAGGTTTGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTCGCACAGCACTGAGCTaGCATCGCGGCGGCCAATGC +
Preference number: 4 (lower is better)
Translates to: RSYLVQGLSLLSCRLGPLRTALS*HRGGQC
Trigger: GCATTGGCCGCCGCGATGTCAGCTCAGTGCTGTGCG...AAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp GAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATTCTTCTCGTCATAAATaGCCCGTGGTCCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: ESVQVSQSSTWLGRPQNHSSRHK*PVVPPS
Trigger: GGAAGGAGGGACCACGGGTCATTTATGACGAGAAGA...ATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR TCA 90 bp TCTAAACATCTGTGTGAACAGCTCTCCAGTACTGTGAAGTCAAAGGCCCAACATAGGGGCCCTGCAGGCTaGGTCCTGTCCTCAAAGCCC +
Preference number: 4 (lower is better)
Translates to: SKHLCEQLSSTVKSKAQHRGPAG*VLSSKP
Trigger: GGGCTTTGAGGACAGGACTCAGCCTGCAGGGCCCCT...ATGTTGGGCCTTTGACTTCACAGTACTGGAGAGCTGTTCACACAGATGTTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp TTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCAGGAAATCATGGCAGGAGGTaGAAGGCACTTCATGGTGGC +
Preference number: 4 (lower is better)
Translates to: FRFLRVPHGWGGLRIMAGNHGRR*KALHGG
Trigger: GCCACCATGAAGTGCCTTTCACCTCCTGCCATGATT...TCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632581.1
CDS-3UTR GCA 90 bp AAGCTGTATTCAATCATCTTTTCAATGCTAAAACCAGGCTTTCCTGTCGGAGTTACGGGCCCTCCTGGCTaGCTCGCGCCTCGAGCGCTG +
Preference number: 4 (lower is better)
Translates to: KLYSIIFSMLKPGFPVGVTGPPG*LAPRAL
Trigger: CAGCGCTCGAGGCGCGAGGCAGCCAGGAGGGCCCGT...AACTCCGACAGGAAAGCCTGGTTTTAGCATTGAAAAGATGATTGAATACAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512972.6
CDS-3UTR GCA 90 bp CAAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGGTTACTGGCTGTGCCTaGTGTCCAGTTCTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: QMESVQVSQSSTWLGRPQVTGCA*CPVLVP
Trigger: TGGAACAAGAACTGGACAGCAGGCACAGCCAGTAAC...CTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR GCA 90 bp TCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCCTACTTCTGCAGGTTTaGTGGACAGAGCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SVQVSQSSTWLGRPQNHGLLLQV*WTELRR
Trigger: CCTTCTCAGCTCTGTCCAGCAAACCTGCAGAAGTAG...GCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CCA 90 bp AAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAACGAGCAGGAGGAGCTaGATGCCAATGAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: KWSPFRFLRVPHGWGGLRTSRRS*MPMKRK
Trigger: CTTCCTCTTCATTGGCATCCAGCTCCTCCTGCTCGT...TCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CCA 90 bp AGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGACGAGCAGGAGGAGCTaGATGCCAATGAAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: SPFRFLRVPHGWGGLRIMTSRRS*MPMKRK
Trigger: CTTCCTCTTCATTGGCATCCAGCTCCTCCTGCTCGT...CATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CCA 90 bp AAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGATGTGGCTGTCGATTTTaGACCCAGGGTGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: KWSPFRFLRVPHGWGGLRCGCRF*TQGEMA
Trigger: AGCCATCTCACCCTGGGTCCAAAATCGACAGCCACA...TCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CCA 90 bp TCTAAACATCTGTGTGAACAGCTCTCCAGTACTGTGAAGTCAAAGGCCCAACATCAGAGAACTCCCGGGTaGGGCAGCAGAGGGGAGCGA +
Preference number: 4 (lower is better)
Translates to: SKHLCEQLSSTVKSKAQHQRTPG*GSRGER
Trigger: TCGCTCCCCTCTGCTGCCCCACCCGGGAGTTCTCTG...ATGTTGGGCCTTTGACTTCACAGTACTGGAGAGCTGTTCACACAGATGTTTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp TTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCAGGAAGAGTTCCACATGGCTaGGGAGGCCTCAGAATCATG +
Preference number: 4 (lower is better)
Translates to: FRFLRVPHGWGGLRIMAGRVPHG*GGLRIM
Trigger: CATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCT...TCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CCA 90 bp AAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGATCTCAGAGTTCCACATaGCTGGGGAGGCCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: KWSPFRFLRVPHGWGGLRSQSST*LGRPQN
Trigger: ATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGA...TCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CCA 90 bp CAAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAAAGGCACTTCATGGTaGCACATGCCTGTAACCCCA +
Preference number: 4 (lower is better)
Translates to: QMESVQVSQSSTWLGRPQKGTSW*HMPVTP
Trigger: TGGGGTTACAGGCATGTGCCACCATGAAGTGCCTTT...CTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000632581.1
CDS-3UTR CCA 90 bp GTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGGTGAAAGGCACTTCATaGTGGCACATGCCTGTAACC +
Preference number: 4 (lower is better)
Translates to: VRSGFSEFHMAGEASESWVKGTS*WHMPVT
Trigger: GGTTACAGGCATGTGCCACCATGAAGTGCCTTTCAC...CCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632581.1
3UTR CAA 72 bp GCCAGCCAAGGAATACAAGGCCTTGTCAGCTGGACCTaGACTGCGCGTAAGGTCAGTTTCTCAAATCACACC +
Preference number: 4 (lower is better)
Translates to: ASQGIQGLVSWT*TARKVSFSNHT
Trigger: GGTGTGATTTGAGAAACTGACCTTACGCGCAGTCAAGGTCCAGCTGACAAGGCCTTGTATTCCTTGGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp TCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCTGCTCTTTCATCTTGTaGGCCACGGTTGTTGACATC +
Preference number: 4 (lower is better)
Translates to: SVQVSQSSTWLGRPQNHGCSFIL*ATVVDI
Trigger: GATGTCAACAACCGTGGCTCACAAGATGAAAGAGCA...GCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR TCA 90 bp TGCCTAACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCGGAGCTGGATGCCAATaGAGAGGAAGCCTCCGACGG +
Preference number: 4 (lower is better)
Translates to: CLTSFFWSVCLRSSPQKFGAGCQ*RGSLRR
Trigger: CCGTCGGAGGCTTCCTCTTCATTGGCATCCAGCTCC...GAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGTTAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp CACGTTACAGATCCAGAACACAAAACGACTTCCGCTTTTACAGTTTCAAAGGCCCGGGTGCTGAGGGACTaGCGAATCCTGGGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: HVTDPEHKTTSAFTVSKARVLRD*RILGQQ
Trigger: TTGCTGCCCCAGGATTCGGCAGTCCCTCAGCACCCG...GGCCTTTGAAACTGTAAAAGCGGAAGTCGTTTTGTGTTCTGGATCTGTAACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp AAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGACTACTTCTGCAGGTTTaGTGGACAGAGCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: KWSPFRFLRVPHGWGGLRLLLQV*WTELRR
Trigger: CCTTCTCAGCTCTGTCCAGCAAACCTGCAGAAGTAG...TCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR GCA 90 bp AATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAACTACTTCTGCAGGTTTaGTGGACAGAGCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: NGVRSGFSEFHMAGEASELLLQV*WTELRR
Trigger: CCTTCTCAGCTCTGTCCAGCAAACCTGCAGAAGTAG...TTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR GCA 90 bp TGCCTAACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCCCCTCCTTCCCCGGCTaGTGCTCTTCAGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: CLTSFFWSVCLRSSPQKFPSFPG*CSSVSS
Trigger: AGAGGACACTGAAGAGCAGCAGCCGGGGAAGGAGGG...GAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGTTAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp ACGAGGGCCTTCTACCGGCCACACTCCCTTGCTTGGGCTTCCCTAAGCTGCTTTTTCTTAGTTGTAGGTTaGGCCCTCTTTCGTTTCCAA +
Preference number: 4 (lower is better)
Translates to: TRAFYRPHSLAWASLSCFFLVVG*ALFRFQ
Trigger: TTGGAAACGAAAGAGGGCCCAACCTACAACTAAGAA...AAAGCAGCTTAGGGAAGCCCAAGCAAGGGAGTGTGGCCGGTAGAAGGCCCTCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp AAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGATGCTCTTTCATCTTGTaGGCCACGGTTGTTGACATC +
Preference number: 4 (lower is better)
Translates to: KWSPFRFLRVPHGWGGLRCSFIL*ATVVDI
Trigger: GATGTCAACAACCGTGGCTCACAAGATGAAAGAGCA...TCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR TCA 90 bp AAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGATGTCCTGATCTGGAATaGAGAAAGCTCCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: KWSPFRFLRVPHGWGGLRCPDLE*RKLLST
Trigger: TGTGCTCAGGAGCTTTCTTCATTCCAGATCAGGACA...TCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR TCA 90 bp ACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCTCACATCACAGCTACTGTGTGTaGCACGCAGCCCCACTCCCT +
Preference number: 4 (lower is better)
Translates to: TSFFWSVCLRSSPQKFSHHSYCV*HAAPLP
Trigger: AGGGAGTGGGGCTGCGTGTCACACACAGTAGCTGTG...ATGTGAGAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp TCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCTTGATGTCTTGCAAATaGAGGAGCCAAATGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SVQVSQSSTWLGRPQNHGLMSCK*RSQMES
Trigger: GGACTCCATTTGGCTCCTTCATTTGCAAGACATCAA...GCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR GCA 90 bp GGCAAGCTGTATTCAATCATCTTTTCAATGCTAAAACCAGGCTTTCCTGTCGGACGGGTGCTGAGGGACTaGCGAATCCTGGGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: GKLYSIIFSMLKPGFPVGRVLRD*RILGQQ
Trigger: TTGCTGCCCCAGGATTCGGCAGTCCCTCAGCACCCG...TCCGACAGGAAAGCCTGGTTTTAGCATTGAAAAGATGATTGAATACAGCTTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512972.6
CDS-3UTR GCA 90 bp CTTGATGTCTTGCAAATGAAGGAGCCAAATGGAGTCCGTTCAGGTTTCTCAGAGCTCCAATTCAGGAGCTaGGTATCGCCCCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: LDVLQMKEPNGVRSGFSELQFRS*VSPLQS
Trigger: GCTCTGCAGGGGCGATACGCAGCTCCTGAATTGGAG...CTCTGAGAAACCTGAACGGACTCCATTTGGCTCCTTCATTTGCAAGACATCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR GCA 90 bp TCTGACCAGCAGCTTCTGGGAATATACTCTTTAGGTCATGTACAAAAAGGTGTACAGGGCGCCAGTCCCTaGCCCGGGGACACTGTTCAA +
Preference number: 4 (lower is better)
Translates to: SDQQLLGIYSLGHVQKGVQGASP*PGDTVQ
Trigger: TTGAACAGTGTCCCCGGGGCAGGGACTGGCGCCCTG...TACACCTTTTTGTACATGACCTAAAGAGTATATTCCCAGAAGCTGCTGGTCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp TGGCACTCCATCTTGTCTCTCTTCCCTGGAGAAAAGGCAAGCTGTATTCAATCAGGGACTGCCGAATCCTaGGGCAGCAATCACAGCAGA +
Preference number: 4 (lower is better)
Translates to: WHSILSLFPGEKASCIQSGTAES*GSNHSR
Trigger: TCTGCTGTGATTGCTGCCCCAGGATTCGGCAGTCCC...TGATTGAATACAGCTTGCCTTTTCTCCAGGGAAGAGAGACAAGATGGAGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512972.6
CDS-3UTR TCA 90 bp GGCAAGCTGTATTCAATCATCTTTTCAATGCTAAAACCAGGCTTTCCTGTCGGAGGAGCTGGATGCCAATaGAGAGGAAGCCTCCGACGG +
Preference number: 4 (lower is better)
Translates to: GKLYSIIFSMLKPGFPVGGAGCQ*RGSLRR
Trigger: CCGTCGGAGGCTTCCTCTTCATTGGCATCCAGCTCC...TCCGACAGGAAAGCCTGGTTTTAGCATTGAAAAGATGATTGAATACAGCTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512972.6
CDS-3UTR TCA 90 bp ACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCTCACATGGCGGGCACATTGCTTaGGCTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: TSFFWSVCLRSSPQKFSHGGHIA*AQEFET
Trigger: GGTCTCAAACTCCTGAGCTCAAGCAATGTGCCCGCC...ATGTGAGAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp AATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATTGATGTCTTGCAAATaGAGGAGCCAAATGGAGTCC +
Preference number: 4 (lower is better)
Translates to: NGVRSGFSEFHMAGEASELMSCK*RSQMES
Trigger: GGACTCCATTTGGCTCCTTCATTTGCAAGACATCAA...TTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR TCA 90 bp AAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGATTGATGTCTTGCAAATaGAGGAGCCAAATGGAGTCC +
Preference number: 4 (lower is better)
Translates to: KWSPFRFLRVPHGWGGLRLMSCK*RSQMES
Trigger: GGACTCCATTTGGCTCCTTCATTTGCAAGACATCAA...TCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR GCA 90 bp AATGAAACTAGTCACAATACTGCCCAGGCTCTTTACCTGCTTCCCCTCAGGGTGGTTACTGGCTGTGCCTaGTGTCCAGTTCTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: NETSHNTAQALYLLPLRVVTGCA*CPVLVP
Trigger: TGGAACAAGAACTGGACAGCAGGCACAGCCAGTAAC...CACCCTGAGGGGAAGCAGGTAAAGAGCCTGGGCAGTATTGTGACTAGTTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp AATGAAACTAGTCACAATACTGCCCAGGCTCTTTACCTGCTTCCCCTCAGGGTGCTACTTCTGCAGGTTTaGTGGACAGAGCTGAGAAGG +
Preference number: 4 (lower is better)
Translates to: NETSHNTAQALYLLPLRVLLLQV*WTELRR
Trigger: CCTTCTCAGCTCTGTCCAGCAAACCTGCAGAAGTAG...CACCCTGAGGGGAAGCAGGTAAAGAGCCTGGGCAGTATTGTGACTAGTTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp AGGTCTTACTTAGTTCAAGGTTTGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTGCTGCGTATCGCCCCTaGAGAGCGTCAGAACTCGAT +
Preference number: 4 (lower is better)
Translates to: RSYLVQGLSLLSCRLGPLAAYRP*RASELD
Trigger: ATCGAGTTCTGACGCTCTGCAGGGGCGATACGCAGC...AAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp ATGAACCTGAACGGTATGGTCACGTTACAGATCCAGAACACAAAACGACTTCCGCCCAGGCTCTTTACCTaGTTCCCCTCAGGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: MNLNGMVTLQIQNTKRLPPRLFT*FPSGCF
Trigger: GAAACACCCTGAGGGGAAGCAGGTAAAGAGCCTGGG...CGGAAGTCGTTTTGTGTTCTGGATCTGTAACGTGACCATACCGTTCAGGTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp CACGTTACAGATCCAGAACACAAAACGACTTCCGCTTTTACAGTTTCAAAGGCCAGGCAGAGGGTAGGCTaGGTGCAGTGGTTTACGCCT +
Preference number: 4 (lower is better)
Translates to: HVTDPEHKTTSAFTVSKARQRVG*VQWFTP
Trigger: AGGCGTAAACCACTGCACGCAGCCTACCCTCTGCCT...GGCCTTTGAAACTGTAAAAGCGGAAGTCGTTTTGTGTTCTGGATCTGTAACGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp TTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCAGGAATGTTCATCTACTTCTaGAGGTTTGCTGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: FRFLRVPHGWGGLRIMAGMFIYF*RFAGQS
Trigger: GCTCTGTCCAGCAAACCTGCAGAAGTAGATGAACAT...TCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632581.1
CDS-3UTR CCA 90 bp TGCCTAACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCCAAGGCCTTGTCAGCTaGACCTTGACTGCGCGTAAG +
Preference number: 4 (lower is better)
Translates to: CLTSFFWSVCLRSSPQKFQGLVS*TLTARK
Trigger: CTTACGCGCAGTCAAGGTCCAGCTGACAAGGCCTTG...GAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGTTAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp AAAGAGAGAGAGAGAGAAAGGTCTAAACATCTGTGTGAACAGCTCTCCAGTACTGTTGTGTGGCTGGGCTaGCTCCAGAAGGAAGCGACG +
Preference number: 4 (lower is better)
Translates to: KERERERSKHLCEQLSSTVVWLG*LQKEAT
Trigger: CGTCGCTTCCTTCTGGAGCCAGCCCAGCCACACAAC...AGTACTGGAGAGCTGTTCACACAGATGTTTAGACCTTTCTCTCTCTCTCTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp CTTGATGTCTTGCAAATGAAGGAGCCAAATGGAGTCCGTTCAGGTTTCTCAGAGAATGAAGAAAGCTCCTaGGCACATGGCCCCCAACAG +
Preference number: 4 (lower is better)
Translates to: LDVLQMKEPNGVRSGFSENEESS*AHGPQQ
Trigger: CTGTTGGGGGCCATGTGCTCAGGAGCTTTCTTCATT...CTCTGAGAAACCTGAACGGACTCCATTTGGCTCCTTCATTTGCAAGACATCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR TCA 90 bp CTTGATGTCTTGCAAATGAAGGAGCCAAATGGAGTCCGTTCAGGTTTCTCAGAGTTTGCTGGACAGAGCTaGGAAGGTGAGGTAGGTGAC +
Preference number: 4 (lower is better)
Translates to: LDVLQMKEPNGVRSGFSEFAGQS*EGEVGD
Trigger: GTCACCTACCTCACCTTCTCAGCTCTGTCCAGCAAA...CTCTGAGAAACCTGAACGGACTCCATTTGGCTCCTTCATTTGCAAGACATCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR TCA 90 bp CTTGATGTCTTGCAAATGAAGGAGCCAAATGGAGTCCGTTCAGGTTTCTCAGAGTCTTCTCGTCATAAATaGCCCGTGGTCCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LDVLQMKEPNGVRSGFSESSRHK*PVVPPS
Trigger: GGAAGGAGGGACCACGGGTCATTTATGACGAGAAGA...CTCTGAGAAACCTGAACGGACTCCATTTGGCTCCTTCATTTGCAAGACATCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR TCA 90 bp TCTAAACATCTGTGTGAACAGCTCTCCAGTACTGTGAAGTCAAAGGCCCAACATAGAGGCGGAAGTGAGTaGGAGGGGTCTGGATTCTGT +
Preference number: 4 (lower is better)
Translates to: SKHLCEQLSSTVKSKAQHRGGSE*EGSGFC
Trigger: ACAGAATCCAGACCCCTCTCACTCACTTCCGCCTCT...ATGTTGGGCCTTTGACTTCACAGTACTGGAGAGCTGTTCACACAGATGTTTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp TCTGACCAGCAGCTTCTGGGAATATACTCTTTAGGTCATGTACAAAAAGGTGTAGGGACCCAGAAAAGATaGGACCTCGGGGAAGGGTGC +
Preference number: 4 (lower is better)
Translates to: SDQQLLGIYSLGHVQKGVGTQKR*DLGEGC
Trigger: GCACCCTTCCCCGAGGTCTCATCTTTTCTGGGTCCC...TACACCTTTTTGTACATGACCTAAAGAGTATATTCCCAGAAGCTGCTGGTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp TGCCTAACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCGCTGACCTCAACAACTaGAAGAGCAGTGCATGCAGC +
Preference number: 4 (lower is better)
Translates to: CLTSFFWSVCLRSSPQKFADLNN*KSSACS
Trigger: GCTGCATGCACTGCTCTTTCAGTTGTTGAGGTCAGC...GAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGTTAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp TCTAAACATCTGTGTGAACAGCTCTCCAGTACTGTGAAGTCAAAGGCCCAACATTGGTCTTGCAACTCCTaGCCTCAAGTGATCCGCCTG +
Preference number: 4 (lower is better)
Translates to: SKHLCEQLSSTVKSKAQHWSCNS*PQVIRL
Trigger: CAGGCGGATCACTTGAGGTCAGGAGTTGCAAGACCA...ATGTTGGGCCTTTGACTTCACAGTACTGGAGAGCTGTTCACACAGATGTTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp ATGAACCTGAACGGTATGGTCACGTTACAGATCCAGAACACAAAACGACTTCCGTTGTCAGCTGGACCTTaGCTGCGCGTAAGGTCAGTT +
Preference number: 4 (lower is better)
Translates to: MNLNGMVTLQIQNTKRLPLSAGP*LRVRSV
Trigger: AACTGACCTTACGCGCAGTCAAGGTCCAGCTGACAA...CGGAAGTCGTTTTGTGTTCTGGATCTGTAACGTGACCATACCGTTCAGGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp TCTGACCAGCAGCTTCTGGGAATATACTCTTTAGGTCATGTACAAAAAGGTGTATTGGGAGGTGGTCCTTaGGCCCAGGAGGTCAAGCCT +
Preference number: 4 (lower is better)
Translates to: SDQQLLGIYSLGHVQKGVLGGGP*AQEVKP
Trigger: AGGCTTGACCTCCTGGGCTCAAGGACCACCTCCCAA...TACACCTTTTTGTACATGACCTAAAGAGTATATTCCCAGAAGCTGCTGGTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp AGGTCTTACTTAGTTCAAGGTTTGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTAAAATCGGCCAGGTGTaGTGGGGCAAACCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: RSYLVQGLSLLSCRLGPLKIGQV*WGKPVV
Trigger: GACCACAGGTTTGCCCCATCACACCTGGCCGATTTT...AAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp CACGTTACAGATCCAGAACACAAAACGACTTCCGCTTTTACAGTTTCAAAGGCCTTGAGCTCAGGAGTTTaGGACCAGCCTGGACAACCC +
Preference number: 4 (lower is better)
Translates to: HVTDPEHKTTSAFTVSKALSSGV*DQPGQP
Trigger: GGGTTGTCCAGGCTGGTCTCAAACTCCTGAGCTCAA...GGCCTTTGAAACTGTAAAAGCGGAAGTCGTTTTGTGTTCTGGATCTGTAACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp TCTAAACATCTGTGTGAACAGCTCTCCAGTACTGTGAAGTCAAAGGCCCAACATCTACTGCATTGTCCCTaGAGAAGGAGGGCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: SKHLCEQLSSTVKSKAQHLLHCP*RRRAQC
Trigger: ACACTGGGCCCTCCTTCTTCAGGGACAATGCAGTAG...ATGTTGGGCCTTTGACTTCACAGTACTGGAGAGCTGTTCACACAGATGTTTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp AAAGAGAGAGAGAGAGAAAGGTCTAAACATCTGTGTGAACAGCTCTCCAGTACTCTCCAATTCAGGAGCTaGGTATCGCCCCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: KERERERSKHLCEQLSSTLQFRS*VSPLQS
Trigger: GCTCTGCAGGGGCGATACGCAGCTCCTGAATTGGAG...AGTACTGGAGAGCTGTTCACACAGATGTTTAGACCTTTCTCTCTCTCTCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp CTTGTCTCTCTTCCCTGGAGAAAAGGCAAGCTGTATTCAATCATCTTTTCAATGCCCTCCTTCCCCGGCTaGTGCTCTTCAGTGTCCTCT +
Preference number: 4 (lower is better)
Translates to: LVSLPWRKGKLYSIIFSMPSFPG*CSSVSS
Trigger: AGAGGACACTGAAGAGCAGCAGCCGGGGAAGGAGGG...CATTGAAAAGATGATTGAATACAGCTTGCCTTTTCTCCAGGGAAGAGAGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512972.6
CDS-3UTR GCA 90 bp CCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCAGTTTCCATCCCCTCTTaGAAAAAGGGTATTCTTAAG +
Preference number: 4 (lower is better)
Translates to: PFRFLRVPHGWGGLRIMAVSIPS*KKGILK
Trigger: CTTAAGAATACCCTTTTTGCAAGAGGGGATGGAAAC...TGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512972.6
CDS-3UTR CCA 90 bp AAATCCAGGAATGTTGACTCCTCACCTGAGTATTGTATATCACAATTAATAACCTCGCGCCTCGAGCGCTaGGCTCAGCCGCAGCTCACA +
Preference number: 4 (lower is better)
Translates to: KSRNVDSSPEYCISQLITSRLER*AQPQLT
Trigger: TGTGAGCTGCGGCTGAGCCCAGCGCTCGAGGCGCGA...GGTTATTAATTGTGATATACAATACTCAGGTGAGGAGTCAACATTCCTGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp CTTGATGTCTTGCAAATGAAGGAGCCAAATGGAGTCCGTTCAGGTTTCTCAGAGACCACAGCTTGTTACTaGCTGTGCCTGCTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: LDVLQMKEPNGVRSGFSETTACY*LCLLSS
Trigger: ACTGGACAGCAGGCACAGCCAGTAACAAGCTGTGGT...CTCTGAGAAACCTGAACGGACTCCATTTGGCTCCTTCATTTGCAAGACATCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CCA 90 bp AAAGAGAGAGAGAGAGAAAGGTCTAAACATCTGTGTGAACAGCTCTCCAGTACTGTCCTCAAAGCCCCCTaGGGACAAGGCTCTAAGAGG +
Preference number: 4 (lower is better)
Translates to: KERERERSKHLCEQLSSTVLKAP*GQGSKR
Trigger: CCTCTTAGAGCCTTGTCCCCAGGGGGCTTTGAGGAC...AGTACTGGAGAGCTGTTCACACAGATGTTTAGACCTTTCTCTCTCTCTCTCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp TGCCTAACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCCCACACTCCCTTGCTTaGGCTTCCCTAAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: CLTSFFWSVCLRSSPQKFPHSLA*ASLSCF
Trigger: AAAGCAGCTTAGGGAAGCCCAAGCAAGGGAGTGTGG...GAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGTTAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp CACGTTACAGATCCAGAACACAAAACGACTTCCGCTTTTACAGTTTCAAAGGCCCTGGAAAACGTTGTGTaGCTGGGCTGGCTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: HVTDPEHKTTSAFTVSKALENVV*LGWLQK
Trigger: CTTCTGGAGCCAGCCCAGCCACACAACGTTTTCCAG...GGCCTTTGAAACTGTAAAAGCGGAAGTCGTTTTGTGTTCTGGATCTGTAACGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp CTTGATGTCTTGCAAATGAAGGAGCCAAATGGAGTCCGTTCAGGTTTCTCAGAGTCTCAGAGTTCCACATaGCTGGGGAGGCCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: LDVLQMKEPNGVRSGFSESQSST*LGRPQN
Trigger: ATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGA...CTCTGAGAAACCTGAACGGACTCCATTTGGCTCCTTCATTTGCAAGACATCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR TCA 90 bp ACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCTCACATAATGAAGAAAGCTCCTaGGCACATGGCCCCCAACAG +
Preference number: 4 (lower is better)
Translates to: TSFFWSVCLRSSPQKFSHNEESS*AHGPQQ
Trigger: CTGTTGGGGGCCATGTGCTCAGGAGCTTTCTTCATT...ATGTGAGAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp CACGTTACAGATCCAGAACACAAAACGACTTCCGCTTTTACAGTTTCAAAGGCCTCTAAGAGGCGGAAGTaGGTGAGAGGGGTCTGGATT +
Preference number: 4 (lower is better)
Translates to: HVTDPEHKTTSAFTVSKASKRRK*VRGVWI
Trigger: AATCCAGACCCCTCTCACTCACTTCCGCCTCTTAGA...GGCCTTTGAAACTGTAAAAGCGGAAGTCGTTTTGTGTTCTGGATCTGTAACGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp CTTGATGTCTTGCAAATGAAGGAGCCAAATGGAGTCCGTTCAGGTTTCTCAGAGGTTACTGGCTGTGCCTaGTGTCCAGTTCTTGTTCCA +
Preference number: 4 (lower is better)
Translates to: LDVLQMKEPNGVRSGFSEVTGCA*CPVLVP
Trigger: TGGAACAAGAACTGGACAGCAGGCACAGCCAGTAAC...CTCTGAGAAACCTGAACGGACTCCATTTGGCTCCTTCATTTGCAAGACATCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR GCA 90 bp CAAGCTGTATTCAATCATCTTTTCAATGCTAAAACCAGGCTTTCCTGTCGGAGTTCCTTCCCCGGCTGCTaGTCTTCAGTGTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: QAVFNHLFNAKTRLSCRSSFPGC*SSVSSP
Trigger: TGGAGAGGACACTGAAGAGCAGCAGCCGGGGAAGGA...ACTCCGACAGGAAAGCCTGGTTTTAGCATTGAAAAGATGATTGAATACAGCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512972.6
CDS-3UTR GCA 90 bp AAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAAGTAGATGTAGACGGTaGCTTTCTTCTCGTCATAAA +
Preference number: 4 (lower is better)
Translates to: KWSPFRFLRVPHGWGGLRSRCRR*LSSRHK
Trigger: TTTATGACGAGAAGAAAGGCACCGTCTACATCTACT...TCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR GCA 90 bp TTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCAGGAAGTAGATGTAGACGGTaGCTTTCTTCTCGTCATAAA +
Preference number: 4 (lower is better)
Translates to: FRFLRVPHGWGGLRIMAGSRCRR*LSSRHK
Trigger: TTTATGACGAGAAGAAAGGCACCGTCTACATCTACT...TCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR GCA 90 bp GGCAAGCTGTATTCAATCATCTTTTCAATGCTAAAACCAGGCTTTCCTGTCGGAGTGAAAGGCACTTCTTaGCGTAGGCCTCTCTGGCAC +
Preference number: 4 (lower is better)
Translates to: GKLYSIIFSMLKPGFPVGVKGTS*RRPLWH
Trigger: GTGCCAGAGAGGCCTACGGCAAGAAGTGCCTTTCAC...TCCGACAGGAAAGCCTGGTTTTAGCATTGAAAAGATGATTGAATACAGCTTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512972.6
CDS-3UTR CCA 90 bp TCTGACCAGCAGCTTCTGGGAATATACTCTTTAGGTCATGTACAAAAAGGTGTAGGGACTGCCGAATCCTaGGGCAGCAATCACAGCAGA +
Preference number: 4 (lower is better)
Translates to: SDQQLLGIYSLGHVQKGVGTAES*GSNHSR
Trigger: TCTGCTGTGATTGCTGCCCCAGGATTCGGCAGTCCC...TACACCTTTTTGTACATGACCTAAAGAGTATATTCCCAGAAGCTGCTGGTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp AGGTCTTACTTAGTTCAAGGTTTGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTACCACAGCTTGTTACTaGCTGTGCCTGCTGTCCAGT +
Preference number: 4 (lower is better)
Translates to: RSYLVQGLSLLSCRLGPLTTACY*LCLLSS
Trigger: ACTGGACAGCAGGCACAGCCAGTAACAAGCTGTGGT...AAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp TCTGACCAGCAGCTTCTGGGAATATACTCTTTAGGTCATGTACAAAAAGGTGTATCAAATCACACCAGCTaGCAGCCAGACCCAGCCGAG +
Preference number: 4 (lower is better)
Translates to: SDQQLLGIYSLGHVQKGVSNHTS*QPDPAE
Trigger: CTCGGCTGGGTCTGGCTGCCAGCTGGTGTGATTTGA...TACACCTTTTTGTACATGACCTAAAGAGTATATTCCCAGAAGCTGCTGGTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp TCTGACCAGCAGCTTCTGGGAATATACTCTTTAGGTCATGTACAAAAAGGTGTAGTGGTCTCAGCTACTTaGGAGGTGGTCCTTGAGCCC +
Preference number: 4 (lower is better)
Translates to: SDQQLLGIYSLGHVQKGVVVSAT*EVVLEP
Trigger: GGGCTCAAGGACCACCTCCCAAGTAGCTGAGACCAC...TACACCTTTTTGTACATGACCTAAAGAGTATATTCCCAGAAGCTGCTGGTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp CTTGATGTCTTGCAAATGAAGGAGCCAAATGGAGTCCGTTCAGGTTTCTCAGAGTGTCCTGATCTGGAATaGAGAAAGCTCCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: LDVLQMKEPNGVRSGFSECPDLE*RKLLST
Trigger: TGTGCTCAGGAGCTTTCTTCATTCCAGATCAGGACA...CTCTGAGAAACCTGAACGGACTCCATTTGGCTCCTTCATTTGCAAGACATCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR TCA 90 bp AAAGAGAGAGAGAGAGAAAGGTCTAAACATCTGTGTGAACAGCTCTCCAGTACTTTTGCTGGACAGAGCTaGGAAGGTGAGGTAGGTGAC +
Preference number: 4 (lower is better)
Translates to: KERERERSKHLCEQLSSTFAGQS*EGEVGD
Trigger: GTCACCTACCTCACCTTCTCAGCTCTGTCCAGCAAA...AGTACTGGAGAGCTGTTCACACAGATGTTTAGACCTTTCTCTCTCTCTCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp CTGTATTCAATCATCTTTTCAATGCTAAAACCAGGCTTTCCTGTCGGAGTTGGGTCTTCTCGTCATAAATaGCCCGTGGTCCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LYSIIFSMLKPGFPVGVGSSRHK*PVVPPS
Trigger: GGAAGGAGGGACCACGGGTCATTTATGACGAGAAGA...CCCAACTCCGACAGGAAAGCCTGGTTTTAGCATTGAAAAGATGATTGAATACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512972.6
CDS-3UTR TCA 90 bp AATGAAACTAGTCACAATACTGCCCAGGCTCTTTACCTGCTTCCCCTCAGGGTGTCTTTCCACCCCGAATaGAATTCTAACAGGAGTTTC +
Preference number: 4 (lower is better)
Translates to: NETSHNTAQALYLLPLRVSFHPE*NSNRSF
Trigger: GAAACTCCTGTTAGAATTTCATTCGGGGTGGAAAGA...CACCCTGAGGGGAAGCAGGTAAAGAGCCTGGGCAGTATTGTGACTAGTTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp TGCCTAACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCGAATCTTTTAACTGCTaGGTACAGAGCTCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: CLTSFFWSVCLRSSPQKFESFNC*VQSSCP
Trigger: AGGGCAGGAGCTCTGTACTCAGCAGTTAAAAGATTC...GAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGTTAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp AAGCTGTATTCAATCATCTTTTCAATGCTAAAACCAGGCTTTCCTGTCGGAGTTCTCCAATTCAGGAGCTaGGTATCGCCCCTGCAGAGC +
Preference number: 4 (lower is better)
Translates to: KLYSIIFSMLKPGFPVGVLQFRS*VSPLQS
Trigger: GCTCTGCAGGGGCGATACGCAGCTCCTGAATTGGAG...AACTCCGACAGGAAAGCCTGGTTTTAGCATTGAAAAGATGATTGAATACAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000512972.6
CDS-3UTR GCA 90 bp ATGAACCTGAACGGTATGGTCACGTTACAGATCCAGAACACAAAACGACTTCCGGCCACTTCCACACATTaGCTAACAAGCTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: MNLNGMVTLQIQNTKRLPATSTH*LTSFFW
Trigger: CCAGAAGAAGCTTGTTAGGCAATGTGTGGAAGTGGC...CGGAAGTCGTTTTGTGTTCTGGATCTGTAACGTGACCATACCGTTCAGGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp CACGTTACAGATCCAGAACACAAAACGACTTCCGCTTTTACAGTTTCAAAGGCCGGTGGCACTCAATTCTaGCCAACTCATACAGTAGGG +
Preference number: 4 (lower is better)
Translates to: HVTDPEHKTTSAFTVSKAGGTQF*PTHTVG
Trigger: CCCTACTGTATGAGTTGGGCAGAATTGAGTGCCACC...GGCCTTTGAAACTGTAAAAGCGGAAGTCGTTTTGTGTTCTGGATCTGTAACGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp ATGAACCTGAACGGTATGGTCACGTTACAGATCCAGAACACAAAACGACTTCCGTGTAACTCTTCCTCTTaGATCAGACCAACCGGCAGA +
Preference number: 4 (lower is better)
Translates to: MNLNGMVTLQIQNTKRLPCNSSS*IRPTGR
Trigger: TCTGCCGGTTGGTCTGATGCAAGAGGAAGAGTTACA...CGGAAGTCGTTTTGTGTTCTGGATCTGTAACGTGACCATACCGTTCAGGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp TCTAAACATCTGTGTGAACAGCTCTCCAGTACTGTGAAGTCAAAGGCCCAACATTCAAGATCATGTCACTaGACTCCAGCGTGGCTGACA +
Preference number: 4 (lower is better)
Translates to: SKHLCEQLSSTVKSKAQHSRSCH*TPAWLT
Trigger: TGTCAGCCACGCTGGAGTGCAGTGACATGATCTTGA...ATGTTGGGCCTTTGACTTCACAGTACTGGAGAGCTGTTCACACAGATGTTTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp AAAGAGAGAGAGAGAGAAAGGTCTAAACATCTGTGTGAACAGCTCTCCAGTACTTGTGGCTGTCGATTTTaGACCCAGGGTGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: KERERERSKHLCEQLSSTCGCRF*TQGEMA
Trigger: AGCCATCTCACCCTGGGTCCAAAATCGACAGCCACA...AGTACTGGAGAGCTGTTCACACAGATGTTTAGACCTTTCTCTCTCTCTCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp AAAGAGAGAGAGAGAGAAAGGTCTAAACATCTGTGTGAACAGCTCTCCAGTACTAAAACGTTGTGTGGCTaGGCTGGCTCCAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: KERERERSKHLCEQLSSTKTLCG*AGSRRK
Trigger: CTTCCTTCTGGAGCCAGCCCAGCCACACAACGTTTT...AGTACTGGAGAGCTGTTCACACAGATGTTTAGACCTTTCTCTCTCTCTCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp CAAGCTGTATTCAATCATCTTTTCAATGCTAAAACCAGGCTTTCCTGTCGGAGTAATGAAGAAAGCTCCTaGGCACATGGCCCCCAACAG +
Preference number: 4 (lower is better)
Translates to: QAVFNHLFNAKTRLSCRSNEESS*AHGPQQ
Trigger: CTGTTGGGGGCCATGTGCTCAGGAGCTTTCTTCATT...ACTCCGACAGGAAAGCCTGGTTTTAGCATTGAAAAGATGATTGAATACAGCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000512972.6
CDS-3UTR TCA 90 bp CATCTTGTCTCTCTTCCCTGGAGAAAAGGCAAGCTGTATTCAATCATCTTTTCATTTGCTGGACAGAGCTaGGAAGGTGAGGTAGGTGAC +
Preference number: 4 (lower is better)
Translates to: HLVSLPWRKGKLYSIIFSFAGQS*EGEVGD
Trigger: GTCACCTACCTCACCTTCTCAGCTCTGTCCAGCAAA...TGAAAAGATGATTGAATACAGCTTGCCTTTTCTCCAGGGAAGAGAGACAAGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512972.6
CDS-3UTR TCA 90 bp TCTGACCAGCAGCTTCTGGGAATATACTCTTTAGGTCATGTACAAAAAGGTGTATCTTCTCGTCATAAATaGCCCGTGGTCCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: SDQQLLGIYSLGHVQKGVSSRHK*PVVPPS
Trigger: GGAAGGAGGGACCACGGGTCATTTATGACGAGAAGA...TACACCTTTTTGTACATGACCTAAAGAGTATATTCCCAGAAGCTGCTGGTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp CACGTTACAGATCCAGAACACAAAACGACTTCCGCTTTTACAGTTTCAAAGGCCATCCCTAAATGTGTCTaGCCAGCAGCTTCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: HVTDPEHKTTSAFTVSKAIPKCV*PAASGN
Trigger: ATTCCCAGAAGCTGCTGGTCAGACACATTTAGGGAT...GGCCTTTGAAACTGTAAAAGCGGAAGTCGTTTTGTGTTCTGGATCTGTAACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp ACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCTCACATAGCTCTCCAGTACTGTaGAGTCAAAGGCCCAACATT +
Preference number: 4 (lower is better)
Translates to: TSFFWSVCLRSSPQKFSHSSPVL*SQRPNI
Trigger: AATGTTGGGCCTTTGACTTCACAGTACTGGAGAGCT...ATGTGAGAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp TGCCTAACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCATCATCTTGGGTAGCTaGCGAAAGTCACGTTTCTGT +
Preference number: 4 (lower is better)
Translates to: CLTSFFWSVCLRSSPQKFIILGS*RKSRFC
Trigger: ACAGAAACGTGACTTTCGGCAGCTACCCAAGATGAT...GAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGTTAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp TCTGACCAGCAGCTTCTGGGAATATACTCTTTAGGTCATGTACAAAAAGGTGTAAAGGCCCTAGGCCACTaGAACACAGCTACTGTGTGT +
Preference number: 4 (lower is better)
Translates to: SDQQLLGIYSLGHVQKGVKALGH*NTATVC
Trigger: ACACACAGTAGCTGTGTTGCAGTGGCCTAGGGCCTT...TACACCTTTTTGTACATGACCTAAAGAGTATATTCCCAGAAGCTGCTGGTCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp ACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCTCACATAAGCCAAGTGGCTACTaGATTGTCCCTGAAGAAGGA +
Preference number: 4 (lower is better)
Translates to: TSFFWSVCLRSSPQKFSHKPSGY*IVPEEG
Trigger: TCCTTCTTCAGGGACAATGCAGTAGCCACTTGGCTT...ATGTGAGAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp ATGAACCTGAACGGTATGGTCACGTTACAGATCCAGAACACAAAACGACTTCCGACACTGTTCAAAAGATaGCACTTTCCAGGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: MNLNGMVTLQIQNTKRLPTLFKR*HFPGCR
Trigger: CCTACAGCCTGGAAAGTGCCATCTTTTGAACAGTGT...CGGAAGTCGTTTTGTGTTCTGGATCTGTAACGTGACCATACCGTTCAGGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp ACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCTCACATGATTCTGTTAGGCGCTaGGGACTCAAGATTTTGGCA +
Preference number: 4 (lower is better)
Translates to: TSFFWSVCLRSSPQKFSHDSVRR*GLKILA
Trigger: TGCCAAAATCTTGAGTCCCCAGCGCCTAACAGAATC...ATGTGAGAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp CACGTTACAGATCCAGAACACAAAACGACTTCCGCTTTTACAGTTTCAAAGGCCAGTTTGAGACCAGCCTaGACAACCCCATCTCTACAA +
Preference number: 4 (lower is better)
Translates to: HVTDPEHKTTSAFTVSKASLRPA*TTPSLQ
Trigger: TTGTAGAGATGGGGTTGTCCAGGCTGGTCTCAAACT...GGCCTTTGAAACTGTAAAAGCGGAAGTCGTTTTGTGTTCTGGATCTGTAACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp GGCAAGCTGTATTCAATCATCTTTTCAATGCTAAAACCAGGCTTTCCTGTCGGACTTTCCTGTCGGAGTTaGGGCCAGAGATGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: GKLYSIIFSMLKPGFPVGLSCRS*GQRCFH
Trigger: ATGGAAACATCTCTGGCCCCAACTCCGACAGGAAAG...TCCGACAGGAAAGCCTGGTTTTAGCATTGAAAAGATGATTGAATACAGCTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512972.6
3UTR CAA 72 bp CTTTCTGGGTGTGTAAGGTCTTACTTAGTTCAAGGTTaGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: LSGCVRSYLVQG*SLLSCRLGPLS
Trigger: CGAAAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCTTACACACCCAGAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp GGCAAGCTGTATTCAATCATCTTTTCAATGCTAAAACCAGGCTTTCCTGTCGGATGCTCTTTCATCTTGTaGGCCACGGTTGTTGACATC +
Preference number: 4 (lower is better)
Translates to: GKLYSIIFSMLKPGFPVGCSFIL*ATVVDI
Trigger: GATGTCAACAACCGTGGCTCACAAGATGAAAGAGCA...TCCGACAGGAAAGCCTGGTTTTAGCATTGAAAAGATGATTGAATACAGCTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512972.6
CDS-3UTR TCA 90 bp CTGTATTCAATCATCTTTTCAATGCTAAAACCAGGCTTTCCTGTCGGAGTTGGGTGTCCTGATCTGGAATaGAGAAAGCTCCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: LYSIIFSMLKPGFPVGVGCPDLE*RKLLST
Trigger: TGTGCTCAGGAGCTTTCTTCATTCCAGATCAGGACA...CCCAACTCCGACAGGAAAGCCTGGTTTTAGCATTGAAAAGATGATTGAATACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512972.6
CDS-3UTR GCA 90 bp AAATCCAGGAATGTTGACTCCTCACCTGAGTATTGTATATCACAATTAATAACCTCCTTCCCCGGCTGCTaGTCTTCAGTGTCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: KSRNVDSSPEYCISQLITSFPGC*SSVSSP
Trigger: TGGAGAGGACACTGAAGAGCAGCAGCCGGGGAAGGA...GGTTATTAATTGTGATATACAATACTCAGGTGAGGAGTCAACATTCCTGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp AAAGAGAGAGAGAGAGAAAGGTCTAAACATCTGTGTGAACAGCTCTCCAGTACTCAGTTGAAAAGCAGGTaGCTCCTCTTGGACCCTATA +
Preference number: 4 (lower is better)
Translates to: KERERERSKHLCEQLSSTQLKSR*LLLDPI
Trigger: TATAGGGTCCAAGAGGAGGCACCTGCTTTTCAACTG...AGTACTGGAGAGCTGTTCACACAGATGTTTAGACCTTTCTCTCTCTCTCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp TCTGACCAGCAGCTTCTGGGAATATACTCTTTAGGTCATGTACAAAAAGGTGTAAACCTACTCCAAGGATaGCAGCATGAACCTGAACGG +
Preference number: 4 (lower is better)
Translates to: SDQQLLGIYSLGHVQKGVNLLQG*QHEPER
Trigger: CCGTTCAGGTTCATGCTGGCATCCTTGGAGTAGGTT...TACACCTTTTTGTACATGACCTAAAGAGTATATTCCCAGAAGCTGCTGGTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR CAA 72 bp TACTTAGTTCAAGGTTTGTCCCTTCTTAGTTGTAGGTaGGGCCCTCTTTCGTTTCCAAGAGGTATAGGACAC +
Preference number: 4 (lower is better)
Translates to: YLVQGLSLLSCR*GPLSFPRGIGH
Trigger: GTGTCCTATACCTCTTGGAAACGAAAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp ACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCTCACATGACCTGATTAACATCTaGAGGCAACATCTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: TSFFWSVCLRSSPQKFSHDLINI*RQHLCK
Trigger: TTTGCAGAGATGTTGCCTTCAGATGTTAATCAGGTC...ATGTGAGAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp CACGTTACAGATCCAGAACACAAAACGACTTCCGCTTTTACAGTTTCAAAGGCCATGATAGCCCTCCATTaGTTAGGCAGAGAAAACATG +
Preference number: 4 (lower is better)
Translates to: HVTDPEHKTTSAFTVSKAMIALH*LGRENM
Trigger: CATGTTTTCTCTGCCTAAGCAATGGAGGGCTATCAT...GGCCTTTGAAACTGTAAAAGCGGAAGTCGTTTTGTGTTCTGGATCTGTAACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp CACGTTACAGATCCAGAACACAAAACGACTTCCGCTTTTACAGTTTCAAAGGCCCACACACAGATGGAGTaGCTTTTGAAACTGAATCTC +
Preference number: 4 (lower is better)
Translates to: HVTDPEHKTTSAFTVSKAHTQME*LLKLNL
Trigger: GAGATTCAGTTTCAAAAGGCACTCCATCTGTGTGTG...GGCCTTTGAAACTGTAAAAGCGGAAGTCGTTTTGTGTTCTGGATCTGTAACGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp AGGTCTTACTTAGTTCAAGGTTTGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTGTGGATTGGGACATATaGATTCTTAATCTGCCCTTC +
Preference number: 4 (lower is better)
Translates to: RSYLVQGLSLLSCRLGPLVDWDI*ILNLPF
Trigger: GAAGGGCAGATTAAGAATGCATATGTCCCAATCCAC...AAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp AGGTCTTACTTAGTTCAAGGTTTGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTGGAACTCAAAGCCATTaGCACAATGTTTCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: RSYLVQGLSLLSCRLGPLGTQSH*HNVSSF
Trigger: GAAACTGGAAACATTGTGCCAATGGCTTTGAGTTCC...AAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp TCTAAACATCTGTGTGAACAGCTCTCCAGTACTGTGAAGTCAAAGGCCCAACATCTTAAATACAGGCTCTaGAATTTCCTTCGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SKHLCEQLSSTVKSKAQHLKYRL*NFLRRK
Trigger: CTTCCTGCGAAGGAAATTCCAGAGCCTGTATTTAAG...ATGTTGGGCCTTTGACTTCACAGTACTGGAGAGCTGTTCACACAGATGTTTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp AATGAAACTAGTCACAATACTGCCCAGGCTCTTTACCTGCTTCCCCTCAGGGTGCCTATAGAAGTGGATTaGGACATATGCATTCTTAAT +
Preference number: 4 (lower is better)
Translates to: NETSHNTAQALYLLPLRVPIEVD*DICILN
Trigger: ATTAAGAATGCATATGTCCCAATCCACTTCTATAGG...CACCCTGAGGGGAAGCAGGTAAAGAGCCTGGGCAGTATTGTGACTAGTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp AGGTCTTACTTAGTTCAAGGTTTGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTACGTGGTTGGGTTTCTaGAGGCTTATAATGGAAATA +
Preference number: 4 (lower is better)
Translates to: RSYLVQGLSLLSCRLGPLTWLGF*RLIMEI
Trigger: TATTTCCATTATAAGCCTTCAGAAACCCAACCACGT...AAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp AGGTCTTACTTAGTTCAAGGTTTGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTCTAGAGTACACCAAATaGGATACTATTTGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: RSYLVQGLSLLSCRLGPLLEYTK*DTIWKG
Trigger: GCCTTTCCAAATAGTATCTCATTTGGTGTACTCTAG...AAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp ACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCTCACATAGTAAACCTTTTCCCTaGCTGAATACATCAACACTG +
Preference number: 4 (lower is better)
Translates to: TSFFWSVCLRSSPQKFSHSKPFP*LNTSTL
Trigger: CAGTGTTGATGTATTCAGGCAGGGAAAAGGTTTACT...ATGTGAGAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp AAATCCAGGAATGTTGACTCCTCACCTGAGTATTGTATATCACAATTAATAACCTCCAGTCAGGTAACATaGCGCGGTATGACACTCCCA +
Preference number: 4 (lower is better)
Translates to: KSRNVDSSPEYCISQLITSSQVT*RGMTLP
Trigger: TGGGAGTGTCATACCGCGGCATGTTACCTGACTGGA...GGTTATTAATTGTGATATACAATACTCAGGTGAGGAGTCAACATTCCTGGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp TCTAAACATCTGTGTGAACAGCTCTCCAGTACTGTGAAGTCAAAGGCCCAACATGAGGATGAGAATGACTaGCCCCACAAGATATTTTTA +
Preference number: 4 (lower is better)
Translates to: SKHLCEQLSSTVKSKAQHEDEND*PHKIFL
Trigger: TAAAAATATCTTGTGGGGCCAGTCATTCTCATCCTC...ATGTTGGGCCTTTGACTTCACAGTACTGGAGAGCTGTTCACACAGATGTTTAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp TCTGACCAGCAGCTTCTGGGAATATACTCTTTAGGTCATGTACAAAAAGGTGTACTAACAAGCTTCTTCTaGTCAGTGTGTCTGAGATCC +
Preference number: 4 (lower is better)
Translates to: SDQQLLGIYSLGHVQKGVLTSFF*SVCLRS
Trigger: GGATCTCAGACACACTGACCAGAAGAAGCTTGTTAG...TACACCTTTTTGTACATGACCTAAAGAGTATATTCCCAGAAGCTGCTGGTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp AAAGAGAGAGAGAGAGAAAGGTCTAAACATCTGTGTGAACAGCTCTCCAGTACTTGCAAGTACGTATTTTaGAAATTCCTGTGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: KERERERSKHLCEQLSSTCKYVF*KFLCSV
Trigger: CACGCTGCACAGGAATTTCCAAAATACGTACTTGCA...AGTACTGGAGAGCTGTTCACACAGATGTTTAGACCTTTCTCTCTCTCTCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR CAA 72 bp TGCCTGAATACATCAACACTGAAAATAGGCATCATCTaGGGTAGCTGCCGAAAGTCACGTTTCTGTATTACT +
Preference number: 4 (lower is better)
Translates to: CLNTSTLKIGII*GSCRKSRFCIT
Trigger: AGTAATACAGAAACGTGACTTTCGGCAGCTACCCAAGATGATGCCTATTTTCAGTGTTGATGTATTCAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp AAATCCAGGAATGTTGACTCCTCACCTGAGTATTGTATATCACAATTAATAACCTCCTTCGCAGGAAGGTaGAGCACCAATGATGGCAAA +
Preference number: 4 (lower is better)
Translates to: KSRNVDSSPEYCISQLITSFAGR*STNDGK
Trigger: TTTGCCATCATTGGTGCTTCACCTTCCTGCGAAGGA...GGTTATTAATTGTGATATACAATACTCAGGTGAGGAGTCAACATTCCTGGATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp ACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCTCACATCGTAACCACATAATTTaGCTACAGCTAATCGTTTCA +
Preference number: 4 (lower is better)
Translates to: TSFFWSVCLRSSPQKFSHRNHII*LQLIVS
Trigger: TGAAACGATTAGCTGTAGCCAAATTATGTGGTTACG...ATGTGAGAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp AAATCCAGGAATGTTGACTCCTCACCTGAGTATTGTATATCACAATTAATAACCTGCTCTTTCATCTTGTaGGCCACGGTTGTTGACATC +
Preference number: 4 (lower is better)
Translates to: KSRNVDSSPEYCISQLITCSFIL*ATVVDI
Trigger: GATGTCAACAACCGTGGCTCACAAGATGAAAGAGCA...GGTTATTAATTGTGATATACAATACTCAGGTGAGGAGTCAACATTCCTGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp AAATCCAGGAATGTTGACTCCTCACCTGAGTATTGTATATCACAATTAATAACCTGTCCTGATCTGGAATaGAGAAAGCTCCTGAGCACA +
Preference number: 4 (lower is better)
Translates to: KSRNVDSSPEYCISQLITCPDLE*RKLLST
Trigger: TGTGCTCAGGAGCTTTCTTCATTCCAGATCAGGACA...GGTTATTAATTGTGATATACAATACTCAGGTGAGGAGTCAACATTCCTGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR TCA 90 bp AAATCCAGGAATGTTGACTCCTCACCTGAGTATTGTATATCACAATTAATAACCTCTGGTCAGTGTGTCTaGGATCCTCACCTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: KSRNVDSSPEYCISQLITSGQCV*DPHLRN
Trigger: ATTTCTGAGGTGAGGATCTCAGACACACTGACCAGA...GGTTATTAATTGTGATATACAATACTCAGGTGAGGAGTCAACATTCCTGGATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp TTGTCTCTCTTCCCTGGAGAAAAGGCAAGCTGTATTCAATCATCTTTTCAATGCAGTAGATGTAGACGGTaGCTTTCTTCTCGTCATAAA +
Preference number: 4 (lower is better)
Translates to: LSLFPGEKASCIQSSFQCSRCRR*LSSRHK
Trigger: TTTATGACGAGAAGAAAGGCACCGTCTACATCTACT...GCATTGAAAAGATGATTGAATACAGCTTGCCTTTTCTCCAGGGAAGAGAGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512972.6
CDS-3UTR GCA 90 bp AAAGAGAGAGAGAGAGAAAGGTCTAAACATCTGTGTGAACAGCTCTCCAGTACTACCTTTCAAAATGACTaGCTCTGTGAAAGAGTTGTT +
Preference number: 4 (lower is better)
Translates to: KERERERSKHLCEQLSSTTFQND*LCERVV
Trigger: AACAACTCTTTCACAGAGGCAGTCATTTTGAAAGGT...AGTACTGGAGAGCTGTTCACACAGATGTTTAGACCTTTCTCTCTCTCTCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp AGGTCTTACTTAGTTCAAGGTTTGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTATTATTACAAAGATGTaGGACCCAGAAAAGATGAGA +
Preference number: 4 (lower is better)
Translates to: RSYLVQGLSLLSCRLGPLIITKM*DPEKMR
Trigger: TCTCATCTTTTCTGGGTCCCACATCTTTGTAATAAT...AAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp AGGTCTTACTTAGTTCAAGGTTTGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTATAAACAATGTTGTATaGAAACAGAACCCCAAAACC +
Preference number: 4 (lower is better)
Translates to: RSYLVQGLSLLSCRLGPLINNVV*KQNPKT
Trigger: GGTTTTGGGGTTCTGTTTCCATACAACATTGTTTAT...AAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR CAA 72 bp ATAGTCCCTCAATCCTCAGATACATCCACATCTGTTTaGTTCATCCAGATACACGTGCTAACATTTTCAGCT +
Preference number: 4 (lower is better)
Translates to: IVPQSSDTSTSV*FIQIHVLTFSA
Trigger: AGCTGAAAATGTTAGCACGTGTATCTGGATGAACAAAACAGATGTGGATGTATCTGAGGATTGAGGGACTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CCA 90 bp AAATCCAGGAATGTTGACTCCTCACCTGAGTATTGTATATCACAATTAATAACCGCCCAGTGTTCTTTCTaGGTGTGTAAGGTCTTACTT +
Preference number: 4 (lower is better)
Translates to: KSRNVDSSPEYCISQLITAQCSF*VCKVLL
Trigger: AAGTAAGACCTTACACACCCAGAAAGAACACTGGGC...GGTTATTAATTGTGATATACAATACTCAGGTGAGGAGTCAACATTCCTGGATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
3UTR CAA 72 bp TCAACAGCACAAACAAGTAAGAATGATAGCCCTCCATaGCTTAGGCAGAGAAAACATGAATCTTGTTCTATA +
Preference number: 4 (lower is better)
Translates to: STAQTSKNDSPP*LRQRKHESCSI
Trigger: TATAGAACAAGATTCATGTTTTCTCTGCCTAAGCAATGGAGGGCTATCATTCTTACTTGTTTGTGCTGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR GCA 90 bp AAATCCAGGAATGTTGACTCCTCACCTGAGTATTGTATATCACAATTAATAACCAGTAGATGTAGACGGTaGCTTTCTTCTCGTCATAAA +
Preference number: 4 (lower is better)
Translates to: KSRNVDSSPEYCISQLITSRCRR*LSSRHK
Trigger: TTTATGACGAGAAGAAAGGCACCGTCTACATCTACT...GGTTATTAATTGTGATATACAATACTCAGGTGAGGAGTCAACATTCCTGGATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS CCA 90 bp CCCCGCGCCGCACGGGCCCTCCTGGCTGCCTCGCGCCTCGAGCGCTaGGCTCAGCCGCAGCTCACACTTGAACGAAGATCAGCCTCGGCG +
Preference number: 5 (lower is better)
Translates to: PRAARALLAASRLER*AQPQLTLERRSASA
Trigger: CGCCGAGGCTGATCTTCGTTCAAGTGTGAGCTGCGGCTGAGCCCAGCGCTCGAGGCGCGAGGCAGCCAGGAGGGCCCGTGCGGCGCGGGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS CCA 90 bp AAAGCCCAGGGGACCGCCGATATCATCACACAGAGAACTCCCGGGTaGGGCAGCAGAGGGGAGCGACCAGCGTACACAGGTACAACAGCA +
Preference number: 5 (lower is better)
Translates to: KAQGTADIITQRTPG*GSRGERPAYTGTTA
Trigger: TGCTGTTGTACCTGTGTACGCTGGTCGCTCCCCTCTGCTGCCCCACCCGGGAGTTCTCTGTGTGATGATATCGGCGGTCCCCTGGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS TCA 90 bp TCCACTTATGTGCAAACTCCACGAGCAGGAGGAGCTGGATGCCAATaGAGAGGAAGCCTCCGACGGCTCCCACATAGCGCCAGGCGTTCA +
Preference number: 5 (lower is better)
Translates to: STYVQTPRAGGAGCQ*RGSLRRLPHSARRS
Trigger: TGAACGCCTGGCGCTATGTGGGAGCCGTCGGAGGCTTCCTCTTCATTGGCATCCAGCTCCTCCTGCTCGTGGAGTTTGCACATAAGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000507668.7
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS CCA 90 bp GGAGTAGATGTAGACGGTGCCTTTCTTCTCGTCATAAATGACCCGTaGTCCCTCCTTCCCCGGCTGCTGCTCTTCAGTGTCCTCTCCACC +
Preference number: 5 (lower is better)
Translates to: GVDVDGAFLLVINDP*SLLPRLLLFSVLST
Trigger: GGTGGAGAGGACACTGAAGAGCAGCAGCCGGGGAAGGAGGGACCACGGGTCATTTATGACGAGAAGAAAGGCACCGTCTACATCTACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000507668.7
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CAA 90 bp AAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAGAGGCGTACCACAGCTaGTTACTGGCTGTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: KWSPFRFLRVPHGWGGLREAYHS*LLAVPA
Trigger: AGCAGGCACAGCCAGTAACAAGCTGTGGTACGCCTC...TCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CAA 90 bp AGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGAGGCGTACCACAGCTaGTTACTGGCTGTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: SPFRFLRVPHGWGGLRIMEAYHS*LLAVPA
Trigger: AGCAGGCACAGCCAGTAACAAGCTGTGGTACGCCTC...CATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CAA 90 bp TCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCGCTTTCCTGTCGGAGTaGGGGCCAGAGATGTTTCCA +
Preference number: 5 (lower is better)
Translates to: SVQVSQSSTWLGRPQNHGAFLSE*GPEMFP
Trigger: TGGAAACATCTCTGGCCCCAACTCCGACAGGAAAGC...GCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512972.6
CDS-3UTR CAA 90 bp GTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGAGGCAAGAGAATCGCTaGACATCTGGGAGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: VRSGFSEFHMAGEASESWRQENR*TSGRWR
Trigger: CCTCCACCTCCCAGATGTCAAGCGATTCTCTTGCCT...CCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632581.1
CDS CCA 90 bp TCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATaGCAGGAGGTGAAAGGCACTTCATGGTGGCACATGCCTGTAACC +
Preference number: 5 (lower is better)
Translates to: SGFSEFHMAGEASES*QEVKGTSWWHMPVT
Trigger: GGTTACAGGCATGTGCCACCATGAAGTGCCTTTCACCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632581.1
CDS-3UTR CAA 90 bp AATGAAACTAGTCACAATACTGCCCAGGCTCTTTACCTGCTTCCCCTCAGGGTGGCCACACTCCCTTGCTaGGGCTTCCCTAAGCTGCTT +
Preference number: 5 (lower is better)
Translates to: NETSHNTAQALYLLPLRVATLPC*GFPKLL
Trigger: AAGCAGCTTAGGGAAGCCCAAGCAAGGGAGTGTGGC...CACCCTGAGGGGAAGCAGGTAAAGAGCCTGGGCAGTATTGTGACTAGTTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CAA 90 bp TCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCTCTACTTCTGCAGGTTaGCTGGACAGAGCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: SVQVSQSSTWLGRPQNHGSTSAG*LDRAEK
Trigger: CTTCTCAGCTCTGTCCAGCAAACCTGCAGAAGTAGA...GCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632581.1
CDS-3UTR CAA 90 bp TTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCAGGAAGAGTGGGACTCCATTaGAACCAGTTGGTGACGGTC +
Preference number: 5 (lower is better)
Translates to: FRFLRVPHGWGGLRIMAGRVGLH*NQLVTV
Trigger: GACCGTCACCAACTGGTTCAAATGGAGTCCCACTCT...TCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632581.1
CDS CCA 90 bp TCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATaGCAGGAGGTGAAAGGCACTTTTGAACCAGTTGGTGACGGTCAT +
Preference number: 5 (lower is better)
Translates to: SGFSEFHMAGEASES*QEVKGTFEPVGDGH
Trigger: ATGACCGTCACCAACTGGTTCAAAAGTGCCTTTCACCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509193.5
CDS-3UTR CAA 90 bp GTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCCTGCTGTCCAGTTCTaGTTCCACTTATGTGCAAAC +
Preference number: 5 (lower is better)
Translates to: VRSGFSEFHMAGEASESWPAVQF*FHLCAN
Trigger: GTTTGCACATAAGTGGAACAAGAACTGGACAGCAGG...CCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CAA 90 bp TGGCAGGAGGTGAAAGGCACTTCTTGCCGTAGGCCTCTCTGGCACTCCATCTTGACTCCCAGCAGAATTTaGTTTTCCATGCAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: WQEVKGTSCRRPLWHSILTPSRI*FSMQLS
Trigger: AGACAGCTGCATGGAAAACAAAATTCTGCTGGGAGT...CAAGATGGAGTGCCAGAGAGGCCTACGGCAAGAAGTGCCTTTCACCTCCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512972.6
CDS-3UTR CAA 90 bp AATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAAACTACTTCTGCAGGTTaGCTGGACAGAGCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: NGVRSGFSEFHMAGEASETTSAG*LDRAEK
Trigger: CTTCTCAGCTCTGTCCAGCAAACCTGCAGAAGTAGT...TTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509193.5
ENST00000512972.6
CDS-3UTR CAA 90 bp TTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCAGGAACTACTTCTGCAGGTTaGCTGGACAGAGCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: FRFLRVPHGWGGLRIMAGTTSAG*LDRAEK
Trigger: CTTCTCAGCTCTGTCCAGCAAACCTGCAGAAGTAGT...TCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000512972.6
CDS-3UTR CAA 90 bp GTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGATCTCTGTACAGGTCTaGACCAAAGTCAGGCACACA +
Preference number: 5 (lower is better)
Translates to: VRSGFSEFHMAGEASESWISVQV*TKVRHT
Trigger: TGTGTGCCTGACTTTGGTCAAGACCTGTACAGAGAT...CCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CAA 90 bp ACGAGGGCCTTCTACCGGCCACACTCCCTTGCTTGGGCTTCCCTAAGCTGCTTTACACGGCTTTTCATTTaGCGACTCCAGATGAATCTT +
Preference number: 5 (lower is better)
Translates to: TRAFYRPHSLAWASLSCFTRLFI*RLQMNL
Trigger: AAGATTCATCTGGAGTCGCAAAATGAAAAGCCGTGT...AAAGCAGCTTAGGGAAGCCCAAGCAAGGGAGTGTGGCCGGTAGAAGGCCCTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CAA 90 bp TGCCTAACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCCGCATCTGGAAAACGTaGTGTGGCTGGGCTGGCTCC +
Preference number: 5 (lower is better)
Translates to: CLTSFFWSVCLRSSPQKFRIWKT*CGWAGS
Trigger: GGAGCCAGCCCAGCCACACAACGTTTTCCAGATGCG...GAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGTTAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CAA 90 bp CCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCACTCCATTTGAACCAGTaGGTGACGGTCATCATCACA +
Preference number: 5 (lower is better)
Translates to: PFRFLRVPHGWGGLRIMALHLNQ*VTVIIT
Trigger: TGTGATGATGACCGTCACCAACTGGTTCAAATGGAG...TGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000632581.1
CDS-3UTR CAA 90 bp TGCCTAACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCAGCCGCAGCTCACACTaGAACGAAGATCAGCCTCGG +
Preference number: 5 (lower is better)
Translates to: CLTSFFWSVCLRSSPQKFSRSSH*NEDQPR
Trigger: CCGAGGCTGATCTTCGTTCAAGTGTGAGCTGCGGCT...GAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGTTAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CAA 90 bp AATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAACCTGCTGTCCAGTTCTaGTTCCACTTATGTGCAAAC +
Preference number: 5 (lower is better)
Translates to: NGVRSGFSEFHMAGEASEPAVQF*FHLCAN
Trigger: GTTTGCACATAAGTGGAACAAGAACTGGACAGCAGG...TTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CAA 90 bp TGCCTAACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCGAGGCGTACCACAGCTaGTTACTGGCTGTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: CLTSFFWSVCLRSSPQKFEAYHS*LLAVPA
Trigger: AGCAGGCACAGCCAGTAACAAGCTGTGGTACGCCTC...GAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGTTAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CAA 90 bp CAAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGACTCCCAGCAGAATTTaGTTTTCCATGCAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: QMESVQVSQSSTWLGRPQTPSRI*FSMQLS
Trigger: AGACAGCTGCATGGAAAACAAAATTCTGCTGGGAGT...CTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CAA 90 bp CCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCAACTCCCAGCAGAATTTaGTTTTCCATGCAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: PFRFLRVPHGWGGLRIMATPSRI*FSMQLS
Trigger: AGACAGCTGCATGGAAAACAAAATTCTGCTGGGAGT...TGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CAA 90 bp AAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAGCACTTTTGAACCAGTaGGTGACGGTCATCATCACA +
Preference number: 5 (lower is better)
Translates to: KWSPFRFLRVPHGWGGLRALLNQ*VTVIIT
Trigger: TGTGATGATGACCGTCACCAACTGGTTCAAAAGTGC...TCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509193.5
CDS TCA 90 bp CCAGGCGTTCAGAAAGGTGTCCTGATCTGGAATGAAGAAAGCTCCTaGGCACATGGCCCCCAACAGCAGAAGTTTAAAGAACCAAAAGCC +
Preference number: 5 (lower is better)
Translates to: PGVQKGVLIWNEESS*AHGPQQQKFKEPKA
Trigger: GGCTTTTGGTTCTTTAAACTTCTGCTGTTGGGGGCCATGTGCTCAGGAGCTTTCTTCATTCCAGATCAGGACACCTTTCTGAACGCCTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000507668.7
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CAA 90 bp TCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCCGTCAGAACTCGATCTaGTTGTTGATGTCAAACATG +
Preference number: 5 (lower is better)
Translates to: SVQVSQSSTWLGRPQNHGRQNSI*LLMSNM
Trigger: CATGTTTGACATCAACAACAAGATCGAGTTCTGACG...GCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CAA 90 bp ATGAACCTGAACGGTATGGTCACGTTACAGATCCAGAACACAAAACGACTTCCGCTTGTCAGCTGGACCTaGACTGCGCGTAAGGTCAGT +
Preference number: 5 (lower is better)
Translates to: MNLNGMVTLQIQNTKRLPLVSWT*TARKVS
Trigger: ACTGACCTTACGCGCAGTCAAGGTCCAGCTGACAAG...CGGAAGTCGTTTTGTGTTCTGGATCTGTAACGTGACCATACCGTTCAGGTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CAA 90 bp TGCCTAACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCCAAGTGGCTACTGCATaGTCCCTGAAGAAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: CLTSFFWSVCLRSSPQKFQVATA*SLKKEG
Trigger: GCCCTCCTTCTTCAGGGACAATGCAGTAGCCACTTG...GAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGTTAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CAA 90 bp AATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAACGTCAGAACTCGATCTaGTTGTTGATGTCAAACATG +
Preference number: 5 (lower is better)
Translates to: NGVRSGFSEFHMAGEASERQNSI*LLMSNM
Trigger: CATGTTTGACATCAACAACAAGATCGAGTTCTGACG...TTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CAA 90 bp AATGAAACTAGTCACAATACTGCCCAGGCTCTTTACCTGCTTCCCCTCAGGGTGCTTCTTAGTTGTAGGTaGGGCCCTCTTTCGTTTCCA +
Preference number: 5 (lower is better)
Translates to: NETSHNTAQALYLLPLRVLLSCR*GPLSFP
Trigger: TGGAAACGAAAGAGGGCCCAACCTACAACTAAGAAG...CACCCTGAGGGGAAGCAGGTAAAGAGCCTGGGCAGTATTGTGACTAGTTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS GCA 90 bp AAACAACAGCGAGCTATCTCCAATTCAGGAGCTGCGTATCGCCCCTaGAGAGCGTCAGAACTCGATCTTGTTGTTGATGTCAAACATGAA +
Preference number: 5 (lower is better)
Translates to: KQQRAISNSGAAYRP*RASELDLVVDVKHE
Trigger: TTCATGTTTGACATCAACAACAAGATCGAGTTCTGACGCTCTGCAGGGGCGATACGCAGCTCCTGAATTGGAGATAGCTCGCTGTTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000507668.7
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS GCA 90 bp AGCAGAAGAAAGCTATTTCCTTTGGATCAGAAAGCTGCCAGGACATaGTGGCACATTCTATCTCTTCTTCACTTTGTGCTCCCCTGCCCT +
Preference number: 5 (lower is better)
Translates to: SRRKLFPLDQKAART*WHILSLLHFVLPCP
Trigger: AGGGCAGGGGAGCACAAAGTGAAGAAGAGATAGAATGTGCCAGCATGTCCTGGCAGCTTTCTGATCCAAAGGAAATAGCTTTCTTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502747.1
CDS-3UTR CAA 90 bp GTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCAGGCAACTTTTGCTGTTGTaGATTTTCAAGGTCAGTAGA +
Preference number: 5 (lower is better)
Translates to: VQVSQSSTWLGRPQNHGRQLLLL*IFKVSR
Trigger: TCTACTGACCTTGAAAATCAACAACAGCAAAAGTTG...CCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CAA 90 bp GTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCTACAACTTTTGCTGTaGTTGATTTTCAAGGTCAGT +
Preference number: 5 (lower is better)
Translates to: VRSGFSEFHMAGEASESWLQLLL*LIFKVS
Trigger: ACTGACCTTGAAAATCAACAACAGCAAAAGTTGTAG...CCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CAA 90 bp ATGAACCTGAACGGTATGGTCACGTTACAGATCCAGAACACAAAACGACTTCCGACTACTTCTGCAGGTTaGCTGGACAGAGCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: MNLNGMVTLQIQNTKRLPTTSAG*LDRAEK
Trigger: CTTCTCAGCTCTGTCCAGCAAACCTGCAGAAGTAGT...CGGAAGTCGTTTTGTGTTCTGGATCTGTAACGTGACCATACCGTTCAGGTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CAA 90 bp GTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATGGCAGAACTCGATCTTGTaGTTGATGTCAAACATGAAT +
Preference number: 5 (lower is better)
Translates to: VRSGFSEFHMAGEASESWQNSIL*LMSNMN
Trigger: ATTCATGTTTGACATCAACAACAAGATCGAGTTCTG...CCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CAA 90 bp ACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCTCACATAGCAGGTGCCTCCTCTaGGACCCTATAAATACCAGG +
Preference number: 5 (lower is better)
Translates to: TSFFWSVCLRSSPQKFSHSRCLL*DPINTR
Trigger: CCTGGTATTTATAGGGTCCAAGAGGAGGCACCTGCT...ATGTGAGAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CAA 90 bp AAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGACAACTTTTGCTGTTGTaGATTTTCAAGGTCAGTAGA +
Preference number: 5 (lower is better)
Translates to: KWSPFRFLRVPHGWGGLRQLLLL*IFKVSR
Trigger: TCTACTGACCTTGAAAATCAACAACAGCAAAAGTTG...TCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CAA 90 bp AAATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGACTACAACTTTTGCTGTaGTTGATTTTCAAGGTCAGT +
Preference number: 5 (lower is better)
Translates to: KWSPFRFLRVPHGWGGLRLQLLL*LIFKVS
Trigger: ACTGACCTTGAAAATCAACAACAGCAAAAGTTGTAG...TCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CAA 90 bp AATGGAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAACTACAACTTTTGCTGTaGTTGATTTTCAAGGTCAGT +
Preference number: 5 (lower is better)
Translates to: NGVRSGFSEFHMAGEASELQLLL*LIFKVS
Trigger: ACTGACCTTGAAAATCAACAACAGCAAAAGTTGTAG...TTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CAA 90 bp CTTGATGTCTTGCAAATGAAGGAGCCAAATGGAGTCCGTTCAGGTTTCTCAGAGCCTGCTGTCCAGTTCTaGTTCCACTTATGTGCAAAC +
Preference number: 5 (lower is better)
Translates to: LDVLQMKEPNGVRSGFSEPAVQF*FHLCAN
Trigger: GTTTGCACATAAGTGGAACAAGAACTGGACAGCAGG...CTCTGAGAAACCTGAACGGACTCCATTTGGCTCCTTCATTTGCAAGACATCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CAA 90 bp AAGCTGTATTCAATCATCTTTTCAATGCTAAAACCAGGCTTTCCTGTCGGAGTTGAGGCGTACCACAGCTaGTTACTGGCTGTGCCTGCT +
Preference number: 5 (lower is better)
Translates to: KLYSIIFSMLKPGFPVGVEAYHS*LLAVPA
Trigger: AGCAGGCACAGCCAGTAACAAGCTGTGGTACGCCTC...AACTCCGACAGGAAAGCCTGGTTTTAGCATTGAAAAGATGATTGAATACAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512972.6
CDS-3UTR CAA 90 bp ATGAACCTGAACGGTATGGTCACGTTACAGATCCAGAACACAAAACGACTTCCGATCTCTGTACAGGTCTaGACCAAAGTCAGGCACACA +
Preference number: 5 (lower is better)
Translates to: MNLNGMVTLQIQNTKRLPISVQV*TKVRHT
Trigger: TGTGTGCCTGACTTTGGTCAAGACCTGTACAGAGAT...CGGAAGTCGTTTTGTGTTCTGGATCTGTAACGTGACCATACCGTTCAGGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CAA 90 bp CTTGATGTCTTGCAAATGAAGGAGCCAAATGGAGTCCGTTCAGGTTTCTCAGAGATCTCTGTACAGGTCTaGACCAAAGTCAGGCACACA +
Preference number: 5 (lower is better)
Translates to: LDVLQMKEPNGVRSGFSEISVQV*TKVRHT
Trigger: TGTGTGCCTGACTTTGGTCAAGACCTGTACAGAGAT...CTCTGAGAAACCTGAACGGACTCCATTTGGCTCCTTCATTTGCAAGACATCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CAA 90 bp GAGTCCGTTCAGGTTTCTCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATCAGAACTCGATCTTGTaGTTGATGTCAAACATGAAT +
Preference number: 5 (lower is better)
Translates to: ESVQVSQSSTWLGRPQNHQNSIL*LMSNMN
Trigger: ATTCATGTTTGACATCAACAACAAGATCGAGTTCTG...ATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGAGAAACCTGAACGGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CAA 90 bp ACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCTCACATGGCCACTTCCACACATaGCCTAACAAGCTTCTTCTG +
Preference number: 5 (lower is better)
Translates to: TSFFWSVCLRSSPQKFSHGHFHT*PNKLLL
Trigger: CAGAAGAAGCTTGTTAGGCAATGTGTGGAAGTGGCC...ATGTGAGAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CAA 90 bp AAATCCAGGAATGTTGACTCCTCACCTGAGTATTGTATATCACAATTAATAACCCTTGGGAGGTGGTCCTaGAGCCCAGGAGGTCAAGCC +
Preference number: 5 (lower is better)
Translates to: KSRNVDSSPEYCISQLITLGRWS*SPGGQA
Trigger: GGCTTGACCTCCTGGGCTCAAGGACCACCTCCCAAG...GGTTATTAATTGTGATATACAATACTCAGGTGAGGAGTCAACATTCCTGGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CAA 90 bp AGGTCTTACTTAGTTCAAGGTTTGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTCCTGCTGTCCAGTTCTaGTTCCACTTATGTGCAAAC +
Preference number: 5 (lower is better)
Translates to: RSYLVQGLSLLSCRLGPLPAVQF*FHLCAN
Trigger: GTTTGCACATAAGTGGAACAAGAACTGGACAGCAGG...AAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CAA 90 bp TGCCTAACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCGCCCCAAATTCTGTTTaGGCAAAAACATGCAGAAGG +
Preference number: 5 (lower is better)
Translates to: CLTSFFWSVCLRSSPQKFAPNSV*AKTCRR
Trigger: CCTTCTGCATGTTTTTGCCAAAACAGAATTTGGGGC...GAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGTTAGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CAA 90 bp TGCCTAACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCAAAATAGGCATCATCTaGGGTAGCTGCCGAAAGTCA +
Preference number: 5 (lower is better)
Translates to: CLTSFFWSVCLRSSPQKFKIGII*GSCRKS
Trigger: TGACTTTCGGCAGCTACCCAAGATGATGCCTATTTT...GAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGTTAGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS GCA 90 bp ACACAGCCCACTCATATATCACATCTACTTTTGGAGGAGCTGCTTTaGCGAGTGAACAACAGCATTGTGGGTTTAGCAGAAAAGAGAATG +
Preference number: 5 (lower is better)
Translates to: TQPTHISHLLLEELL*RVNNSIVGLAEKRM
Trigger: CATTCTCTTTTCTGCTAAACCCACAATGCTGTTGTTCACTCGGCAAAGCAGCTCCTCCAAAAGTAGATGTGATATATGAGTGGGCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502747.1
CDS-3UTR CAA 90 bp ATGAACCTGAACGGTATGGTCACGTTACAGATCCAGAACACAAAACGACTTCCGAATGATAGCCCTCCATaGCTTAGGCAGAGAAAACAT +
Preference number: 5 (lower is better)
Translates to: MNLNGMVTLQIQNTKRLPNDSPP*LRQRKH
Trigger: ATGTTTTCTCTGCCTAAGCAATGGAGGGCTATCATT...CGGAAGTCGTTTTGTGTTCTGGATCTGTAACGTGACCATACCGTTCAGGTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CAA 90 bp ATGAACCTGAACGGTATGGTCACGTTACAGATCCAGAACACAAAACGACTTCCGTTGCAAGTACGTATTTaGGAAATTCCTGTGCAGCGT +
Preference number: 5 (lower is better)
Translates to: MNLNGMVTLQIQNTKRLPLQVRI*EIPVQR
Trigger: ACGCTGCACAGGAATTTCCAAAATACGTACTTGCAA...CGGAAGTCGTTTTGTGTTCTGGATCTGTAACGTGACCATACCGTTCAGGTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS GCA 90 bp TTCCATCAACAGCAGAAGAAAGCTATTTCCTTTGGATCAGAAAGCTaGCAGGACATGCTGGCACATTCTATCTCTTCTTCACTTTGTGCT +
Preference number: 5 (lower is better)
Translates to: FHQQQKKAISFGSES*QDMLAHSISSSLCA
Trigger: AGCACAAAGTGAAGAAGAGATAGAATGTGCCAGCATGTCCTGGCAGCTTTCTGATCCAAAGGAAATAGCTTTCTTCTGCTGTTGATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502747.1
CDS-3UTR CAA 90 bp CAAGCTGTATTCAATCATCTTTTCAATGCTAAAACCAGGCTTTCCTGTCGGAGTATCTCTGTACAGGTCTaGACCAAAGTCAGGCACACA +
Preference number: 5 (lower is better)
Translates to: QAVFNHLFNAKTRLSCRSISVQV*TKVRHT
Trigger: TGTGTGCCTGACTTTGGTCAAGACCTGTACAGAGAT...ACTCCGACAGGAAAGCCTGGTTTTAGCATTGAAAAGATGATTGAATACAGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512972.6
CDS-3UTR CAA 90 bp AGGTCTTACTTAGTTCAAGGTTTGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTCGTCAGAACTCGATCTaGTTGTTGATGTCAAACATG +
Preference number: 5 (lower is better)
Translates to: RSYLVQGLSLLSCRLGPLRQNSI*LLMSNM
Trigger: CATGTTTGACATCAACAACAAGATCGAGTTCTGACG...AAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CAA 90 bp ACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCTCACATTGGGGACTCAAGATTTaGGCATGTTTTTCTATTCCG +
Preference number: 5 (lower is better)
Translates to: TSFFWSVCLRSSPQKFSHWGLKI*ACFSIP
Trigger: CGGAATAGAAAAACATGCCAAAATCTTGAGTCCCCA...ATGTGAGAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CAA 90 bp ACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCTCACATACATCCACATCTGTTTaGTTCATCCAGATACACGTG +
Preference number: 5 (lower is better)
Translates to: TSFFWSVCLRSSPQKFSHTSTSV*FIQIHV
Trigger: CACGTGTATCTGGATGAACAAAACAGATGTGGATGT...ATGTGAGAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CAA 90 bp ATGAACCTGAACGGTATGGTCACGTTACAGATCCAGAACACAAAACGACTTCCGCTACAACTTTTGCTGTaGTTGATTTTCAAGGTCAGT +
Preference number: 5 (lower is better)
Translates to: MNLNGMVTLQIQNTKRLPLQLLL*LIFKVS
Trigger: ACTGACCTTGAAAATCAACAACAGCAAAAGTTGTAG...CGGAAGTCGTTTTGTGTTCTGGATCTGTAACGTGACCATACCGTTCAGGTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CAA 90 bp TCTGACCAGCAGCTTCTGGGAATATACTCTTTAGGTCATGTACAAAAAGGTGTAACTCCCAGCAGAATTTaGTTTTCCATGCAGCTGTCT +
Preference number: 5 (lower is better)
Translates to: SDQQLLGIYSLGHVQKGVTPSRI*FSMQLS
Trigger: AGACAGCTGCATGGAAAACAAAATTCTGCTGGGAGT...TACACCTTTTTGTACATGACCTAAAGAGTATATTCCCAGAAGCTGCTGGTCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CAA 90 bp TGCCTAACAAGCTTCTTCTGGTCAGTGTGTCTGAGATCCTCACCTCAGAAATTCCAGAACTCGATCTTGTaGTTGATGTCAAACATGAAT +
Preference number: 5 (lower is better)
Translates to: CLTSFFWSVCLRSSPQKFQNSIL*LMSNMN
Trigger: ATTCATGTTTGACATCAACAACAAGATCGAGTTCTG...GAATTTCTGAGGTGAGGATCTCAGACACACTGACCAGAAGAAGCTTGTTAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CAA 90 bp CTTGATGTCTTGCAAATGAAGGAGCCAAATGGAGTCCGTTCAGGTTTCTCAGAGCAGAACTCGATCTTGTaGTTGATGTCAAACATGAAT +
Preference number: 5 (lower is better)
Translates to: LDVLQMKEPNGVRSGFSEQNSIL*LMSNMN
Trigger: ATTCATGTTTGACATCAACAACAAGATCGAGTTCTG...CTCTGAGAAACCTGAACGGACTCCATTTGGCTCCTTCATTTGCAAGACATCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS-3UTR CAA 90 bp TCTAAACATCTGTGTGAACAGCTCTCCAGTACTGTGAAGTCAAAGGCCCAACATTTAAATCCAGGAATGTaGACTCCTCACCTGAGTATT +
Preference number: 5 (lower is better)
Translates to: SKHLCEQLSSTVKSKAQHLNPGM*TPHLSI
Trigger: AATACTCAGGTGAGGAGTCAACATTCCTGGATTTAA...ATGTTGGGCCTTTGACTTCACAGTACTGGAGAGCTGTTCACACAGATGTTTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CAA 90 bp AAAGAGAGAGAGAGAGAAAGGTCTAAACATCTGTGTGAACAGCTCTCCAGTACTCTTAGGGTGACAATTTaGACATGGGGACAGGAAATT +
Preference number: 5 (lower is better)
Translates to: KERERERSKHLCEQLSSTLRVTI*TWGQEI
Trigger: AATTTCCTGTCCCCATGTCAAAATTGTCACCCTAAG...AGTACTGGAGAGCTGTTCACACAGATGTTTAGACCTTTCTCTCTCTCTCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CAA 90 bp AGGTCTTACTTAGTTCAAGGTTTGTCCCTTCTTAGTTGTAGGTTGGGCCCTCTTTACTTAGTTCAAGGTTaGTCCCTTCTTAGTTGTAGG +
Preference number: 5 (lower is better)
Translates to: RSYLVQGLSLLSCRLGPLYLVQG*SLLSCR
Trigger: CCTACAACTAAGAAGGGACAAACCTTGAACTAAGTA...AAGAGGGCCCAACCTACAACTAAGAAGGGACAAACCTTGAACTAAGTAAGACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS TCA 90 bp TGCAACAACAAGGAGACTCTGTCACTATGTCACACAGGCCAAGAATaGATGTATGTCACCATCATCTTAACACCTACCTGTAAAACAACA +
Preference number: 5 (lower is better)
Translates to: CNNKETLSLCHTGQE*MYVTIILTPTCKTT
Trigger: TGTTGTTTTACAGGTAGGTGTTAAGATGATGGTGACATACATTCATTCTTGGCCTGTGTGACATAGTGACAGAGTCTCCTTGTTGTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502747.1
CDS TCA 90 bp GGGATGTATTCTGGATTCTACAAGGTCATCACATACTACAGTCTATaGCAGGGCAAAAAGCTCTTACCTGCCAATGATCAAAAAGCTTTT +
Preference number: 5 (lower is better)
Translates to: GMYSGFYKVITYYSL*QGKKLLPANDQKAF
Trigger: AAAAGCTTTTTGATCATTGGCAGGTAAGAGCTTTTTGCCCTGTCATAGACTGTAGTATGTGATGACCTTGTAGAATCCAGAATACATCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000502747.1
CDS-3UTR CAA 90 bp AAGCTGTATTCAATCATCTTTTCAATGCTAAAACCAGGCTTTCCTGTCGGAGTTCGTCAGAACTCGATCTaGTTGTTGATGTCAAACATG +
Preference number: 5 (lower is better)
Translates to: KLYSIIFSMLKPGFPVGVRQNSI*LLMSNM
Trigger: CATGTTTGACATCAACAACAAGATCGAGTTCTGACG...AACTCCGACAGGAAAGCCTGGTTTTAGCATTGAAAAGATGATTGAATACAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000512972.6
CDS-3UTR CAA 90 bp TCTGACCAGCAGCTTCTGGGAATATACTCTTTAGGTCATGTACAAAAAGGTGTACAACTTTTGCTGTTGTaGATTTTCAAGGTCAGTAGA +
Preference number: 5 (lower is better)
Translates to: SDQQLLGIYSLGHVQKGVQLLLL*IFKVSR
Trigger: TCTACTGACCTTGAAAATCAACAACAGCAAAAGTTG...TACACCTTTTTGTACATGACCTAAAGAGTATATTCCCAGAAGCTGCTGGTCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS-3UTR CAA 90 bp CAAGCTGTATTCAATCATCTTTTCAATGCTAAAACCAGGCTTTCCTGTCGGAGTCAACTTTTGCTGTTGTaGATTTTCAAGGTCAGTAGA +
Preference number: 5 (lower is better)
Translates to: QAVFNHLFNAKTRLSCRSQLLLL*IFKVSR
Trigger: TCTACTGACCTTGAAAATCAACAACAGCAAAAGTTG...ACTCCGACAGGAAAGCCTGGTTTTAGCATTGAAAAGATGATTGAATACAGCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000512972.6
CDS TCA 72 bp ACAGCAGCAGGCCAGCTGGCCCGCACAGCACTGAGCTaGCATCGCGGCGGCCAATGCCGAAGGCGCGCTCGC +
Preference number: 6 (lower is better)
Translates to: TAAGQLARTALS*HRGGQCRRRAR
Trigger: GCGAGCGCGCCTTCGGCATTGGCCGCCGCGATGTCAGCTCAGTGCTGTGCGGGCCAGCTGGCCTGCTGCTGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000507668.7
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS TCA 72 bp GACCCACAGCAGCAGGCCAGCTGGCCCGCACAGCACTaGGCTGACATCGCGGCGGCCAATGCCGAAGGCGCG +
Preference number: 6 (lower is better)
Translates to: DPQQQASWPAQH*ADIAAANAEGA
Trigger: CGCGCCTTCGGCATTGGCCGCCGCGATGTCAGCTCAGTGCTGTGCGGGCCAGCTGGCCTGCTGCTGTGGGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000507668.7
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS CCA 72 bp GCACGGGCCCTCCTGGCTGCCTCGCGCCTCGAGCGCTaGGCTCAGCCGCAGCTCACACTTGAACGAAGATCA +
Preference number: 6 (lower is better)
Translates to: ARALLAASRLER*AQPQLTLERRS
Trigger: TGATCTTCGTTCAAGTGTGAGCTGCGGCTGAGCCCAGCGCTCGAGGCGCGAGGCAGCCAGGAGGGCCCGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS CCA 72 bp GGGACCGCCGATATCATCACACAGAGAACTCCCGGGTaGGGCAGCAGAGGGGAGCGACCAGCGTACACAGGT +
Preference number: 6 (lower is better)
Translates to: GTADIITQRTPG*GSRGERPAYTG
Trigger: ACCTGTGTACGCTGGTCGCTCCCCTCTGCTGCCCCACCCGGGAGTTCTCTGTGTGATGATATCGGCGGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS CAA 90 bp AGCGTACACAGGTACAACAGCACGCATATCCAGCAGGAGGCCATCTaGACCCAGAAGATGGACCAGCTCCCGCTGAAGAAGCTCTCGATG +
Preference number: 6 (lower is better)
Translates to: SVHRYNSTHIQQEAI*TQKMDQLPLKKLSM
Trigger: CATCGAGAGCTTCTTCAGCGGGAGCTGGTCCATCTTCTGGGTCAAGATGGCCTCCTGCTGGATATGCGTGCTGTTGTACCTGTGTACGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507668.7
CDS CCA 72 bp TCACCAGGGCCAGGGAGGCGTACCACAGCTTGTTACTaGCTGTGCCTGCTGTCCAGTTCTTGTTCCACTTAT +
Preference number: 6 (lower is better)
Translates to: SPGPGRRTTACY*LCLLSSSCSTY
Trigger: ATAAGTGGAACAAGAACTGGACAGCAGGCACAGCCAGTAACAAGCTGTGGTACGCCTCCCTGGCCCTGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000507668.7
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS TCA 72 bp ACATGGCTGGGGAGGCCTCAGAATCATGGCAGGAGGTaGAAGGCACTTTTGAACCAGTTGGTGACGGTCATC +
Preference number: 6 (lower is better)
Translates to: TWLGRPQNHGRR*KALLNQLVTVI
Trigger: GATGACCGTCACCAACTGGTTCAAAAGTGCCTTTCACCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509193.5
CDS GCA 72 bp GCAAAAACAACAGCGAGCTATCTCCAATTCAGGAGCTaGGTATCGCCCCTGCAGAGCGTCAGAACTCGATCT +
Preference number: 6 (lower is better)
Translates to: AKTTASYLQFRS*VSPLQSVRTRS
Trigger: AGATCGAGTTCTGACGCTCTGCAGGGGCGATACGCAGCTCCTGAATTGGAGATAGCTCGCTGTTGTTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000507668.7
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS CCA 72 bp TCAGAGTTCCACATGGCTGGGGAGGCCTCAGAATCATaGCAGGAGGTGAAAGGCACTTTTGAACCAGTTGGT +
Preference number: 6 (lower is better)
Translates to: SEFHMAGEASES*QEVKGTFEPVG
Trigger: ACCAACTGGTTCAAAAGTGCCTTTCACCTCCTGCCATGATTCTGAGGCCTCCCCAGCCATGTGGAACTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509193.5
CDS TCA 72 bp AGGAATGTGCTCTTTCATCTTGTGAGCCACGGTTGTTaGCATCATGATGCAGCAGAGGACGACGACCAGAAT +
Preference number: 6 (lower is better)
Translates to: RNVLFHLVSHGC*HHDAAEDDDQN
Trigger: ATTCTGGTCGTCGTCCTCTGCTGCATCATGATGTCAACAACCGTGGCTCACAAGATGAAAGAGCACATTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000507668.7
ENST00000509193.5
ENST00000512972.6
ENST00000513907.1
ENST00000632581.1
CDS CCA 72 bp CTATTTCCTTTGGATCAGAAAGCTGCCAGGACATGCTaGCACATTCTATCTCTTCTTCACTTTGTGCTCCCC +
Preference number: 6 (lower is better)
Translates to: LFPLDQKAARTC*HILSLLHFVLP
Trigger: GGGGAGCACAAAGTGAAGAAGAGATAGAATGTGCCAGCATGTCCTGGCAGCTTTCTGATCCAAAGGAAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502747.1
CDS CAA 90 bp CCACAAGCATCTGAAACACAGCCCACTCATATATCACATCTACTTTaGGAGGAGCTGCTTTGCCGAGTGAACAACAGCATTGTGGGTTTA +
Preference number: 6 (lower is better)
Translates to: PQASETQPTHISHLL*EELLCRVNNSIVGL
Trigger: TAAACCCACAATGCTGTTGTTCACTCGGCAAAGCAGCTCCTCCAAAAGTAGATGTGATATATGAGTGGGCTGTGTTTCAGATGCTTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502747.1
CDS CAA 72 bp CTGCGTATCGCCCCTGCAGAGCGTCAGAACTCGATCTaGTTGTTGATGTCAAACATGAATACAAGATACATC +
Preference number: 6 (lower is better)
Translates to: LRIAPAERQNSI*LLMSNMNTRYI
Trigger: GATGTATCTTGTATTCATGTTTGACATCAACAACAAGATCGAGTTCTGACGCTCTGCAGGGGCGATACGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000507668.7
ENST00000509193.5
ENST00000512972.6
ENST00000632581.1
CDS CAA 90 bp GCACTCTGTACTCTTTCCATCAACAGCAGAAGAAAGCTATTTCCTTaGGATCAGAAAGCTGCCAGGACATGCTGGCACATTCTATCTCTT +
Preference number: 6 (lower is better)
Translates to: ALCTLSINSRRKLFP*DQKAARTCWHILSL
Trigger: AAGAGATAGAATGTGCCAGCATGTCCTGGCAGCTTTCTGATCCAAAGGAAATAGCTTTCTTCTGCTGTTGATGGAAAGAGTACAGAGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502747.1
CDS GCA 72 bp AAGCTATTTCCTTTGGATCAGAAAGCTGCCAGGACATaGTGGCACATTCTATCTCTTCTTCACTTTGTGCTC +
Preference number: 6 (lower is better)
Translates to: KLFPLDQKAART*WHILSLLHFVL
Trigger: GAGCACAAAGTGAAGAAGAGATAGAATGTGCCAGCATGTCCTGGCAGCTTTCTGATCCAAAGGAAATAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502747.1
CDS CAA 72 bp CACTCATATATCACATCTACTTTTGGAGGAGCTGCTTaGCCGAGTGAACAACAGCATTGTGGGTTTAGCAGA +
Preference number: 6 (lower is better)
Translates to: HSYITSTFGGAA*PSEQQHCGFSR
Trigger: TCTGCTAAACCCACAATGCTGTTGTTCACTCGGCAAAGCAGCTCCTCCAAAAGTAGATGTGATATATGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502747.1
CDS CAA 72 bp TCTGAAACACAGCCCACTCATATATCACATCTACTTTaGGAGGAGCTGCTTTGCCGAGTGAACAACAGCATT +
Preference number: 6 (lower is better)
Translates to: SETQPTHISHLL*EELLCRVNNSI
Trigger: AATGCTGTTGTTCACTCGGCAAAGCAGCTCCTCCAAAAGTAGATGTGATATATGAGTGGGCTGTGTTTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502747.1
CDS CAA 90 bp AACACAGCCCACTCATATATCACATCTACTTTTGGAGGAGCTGCTTaGCCGAGTGAACAACAGCATTGTGGGTTTAGCAGAAAAGAGAAT +
Preference number: 6 (lower is better)
Translates to: NTAHSYITSTFGGAA*PSEQQHCGFSRKEN
Trigger: ATTCTCTTTTCTGCTAAACCCACAATGCTGTTGTTCACTCGGCAAAGCAGCTCCTCCAAAAGTAGATGTGATATATGAGTGGGCTGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502747.1
CDS GCA 72 bp ACTCATATATCACATCTACTTTTGGAGGAGCTGCTTTaGCGAGTGAACAACAGCATTGTGGGTTTAGCAGAA +
Preference number: 6 (lower is better)
Translates to: THISHLLLEELL*RVNNSIVGLAE
Trigger: TTCTGCTAAACCCACAATGCTGTTGTTCACTCGGCAAAGCAGCTCCTCCAAAAGTAGATGTGATATATGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502747.1
CDS TCA 72 bp CCTTTTAAAGGTGGAATAACCCCCACCACAAGCATCTaGAACACAGCCCACTCATATATCACATCTACTTTT +
Preference number: 6 (lower is better)
Translates to: PFKGGITPTTSI*NTAHSYITSTF
Trigger: AAAAGTAGATGTGATATATGAGTGGGCTGTGTTTCAGATGCTTGTGGTGGGGGTTATTCCACCTTTAAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000502747.1