RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEPTIN9 (Homo sapiens)

Ensembl gene IDs: ENSG00000184640

Ensembl transcript IDs: ENST00000329047.13, ENST00000423034.6, ENST00000427177.6, ENST00000427180.5, ENST00000427674.6, ENST00000431235.6, ENST00000449803.6, ENST00000541152.6, ENST00000585638.1, ENST00000585929.5, ENST00000585930.5, ENST00000586128.5, ENST00000586433.5, ENST00000586456.1, ENST00000586521.5, ENST00000586812.1, ENST00000587237.1, ENST00000587514.1, ENST00000588575.1, ENST00000588690.6, ENST00000588958.6, ENST00000589070.1, ENST00000589140.1, ENST00000589246.1, ENST00000589250.6, ENST00000589920.5, ENST00000590059.5, ENST00000590294.6, ENST00000590576.5, ENST00000590586.1, ENST00000590595.1, ENST00000590825.1, ENST00000590917.5, ENST00000590938.5, ENST00000591020.5, ENST00000591088.5, ENST00000591198.5, ENST00000591472.6, ENST00000591704.5, ENST00000591833.5, ENST00000591934.1, ENST00000592098.1, ENST00000592407.1, ENST00000592420.1, ENST00000592481.6, ENST00000592951.5, ENST00000593189.6, ENST00000631417.1, ENST00000632430.1, ENST00000633175.1, ENST00000633211.1, ENST00000633557.1, ENST00000675703.1

Found 1680 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTGGTCACTTGGGCAGGGCAGGCGCCGGGCAGCTCACGCCACTCTaGCCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCTTCC +
Preference number: 1 (lower is better)
Translates to: PGHLGRAGAGQLTPL*PAQATAHTCPRQPS
Trigger: GGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCTGCCCGGCGCCTGCCCTGCCCAAGTGACCAGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR CCA 90 bp CGGCCGCCTTGGGGCCCGAGAGCTCCACCCTCCGCAGGGACGCCTTaGGGGAGCGTTGGCTTAGGGAGTCCACATGGCGGGCCGAGGGTT +
Preference number: 1 (lower is better)
Translates to: RPPWGPRAPPSAGTP*GSVGLGSPHGGPRV
Trigger: AACCCTCGGCCCGCCATGTGGACTCCCTAAGCCAACGCTCCCCCAAGGCGTCCCTGCGGAGGGTGGAGCTCTCGGGCCCCAAGGCGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591833.5
3UTR CCA 90 bp TGTCAATGGACAGCTCAGTGCGCCGGGACACCGGCTCGGCCGCCTTaGGGCCCGAGAGCTCCACCCTCCGCAGGGACGCCTTGGGGGAGC +
Preference number: 1 (lower is better)
Translates to: CQWTAQCAGTPARPP*GPRAPPSAGTPWGS
Trigger: GCTCCCCCAAGGCGTCCCTGCGGAGGGTGGAGCTCTCGGGCCCCAAGGCGGCCGAGCCGGTGTCCCGGCGCACTGAGCTGTCCATTGACA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591833.5
3UTR CCA 90 bp GGGCCCGAGAGCTCCACCCTCCGCAGGGACGCCTTGGGGGAGCGTTaGCTTAGGGAGTCCACATGGCGGGCCGAGGGTTCTGAGTTCTTC +
Preference number: 1 (lower is better)
Translates to: GPESSTLRRDALGER*LRESTWRAEGSEFF
Trigger: GAAGAACTCAGAACCCTCGGCCCGCCATGTGGACTCCCTAAGCCAACGCTCCCCCAAGGCGTCCCTGCGGAGGGTGGAGCTCTCGGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591833.5
3UTR CCA 90 bp CTCCGCAGGGACGCCTTGGGGGAGCGTTGGCTTAGGGAGTCCACATaGCGGGCCGAGGGTTCTGAGTTCTTCACGCCCAGGTCCTGGAAT +
Preference number: 1 (lower is better)
Translates to: LRRDALGERWLREST*RAEGSEFFTPRSWN
Trigger: ATTCCAGGACCTGGGCGTGAAGAACTCAGAACCCTCGGCCCGCCATGTGGACTCCCTAAGCCAACGCTCCCCCAAGGCGTCCCTGCGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591833.5
3UTR TCA 90 bp GCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGTGTGCACCTaGGTGGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGAC +
Preference number: 1 (lower is better)
Translates to: AASPVPADAPGDVCT*VESHQAPLSPQEQD
Trigger: GTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCCACTCAGGTGCACACATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR TCA 90 bp CTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTaGTGTGTGCACCTGAGTGGAGTCTCATCAGGCCCCTCTTTCTCC +
Preference number: 1 (lower is better)
Translates to: LLAASSQPGACRCTW*CVHLSGVSSGPSFS
Trigger: GGAGAAAGAGGGGCCTGATGAGACTCCACTCAGGTGCACACATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR CCA 90 bp CCGAGGGTTCTGAGTTCTTCACGCCCAGGTCCTGGAATTTCTGGGTaGAGCTGGCCACAGTGGCTCGGAGTAGGGGAGTCTGGACCCTCC +
Preference number: 1 (lower is better)
Translates to: PRVLSSSRPGPGISG*SWPQWLGVGESGPS
Trigger: GGAGGGTCCAGACTCCCCTACTCCGAGCCACTGTGGCCAGCTCCACCCAGAAATTCCAGGACCTGGGCGTGAAGAACTCAGAACCCTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591833.5
3UTR GCA 90 bp GCCGGGCCGTGCTGCCACGAAACCTTGCTCTTCAGCTGTGGACTGTaGACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGTTCGTTACCA +
Preference number: 1 (lower is better)
Translates to: AGPCCHETLLFSCGL*TPDARSLLSRGSLP
Trigger: TGGTAACGAACCCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCACGGCCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR CCA 90 bp CCAGCCCGGTGCCTGCAGATGCACCTGGTGATGTGTGCACCTGAGTaGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGT +
Preference number: 1 (lower is better)
Translates to: PARCLQMHLVMCAPE*SLIRPLFLPRSKTG
Trigger: ACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCCACTCAGGTGCACACATCACCAGGTGCATCTGCAGGCACCGGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR CCA 90 bp AGTGTCTCTTGTGATTCCTTTGTTATCCCCATTATCTTACGAAAATaGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAG +
Preference number: 1 (lower is better)
Translates to: SVSCDSFVIPIILRK*GVDAGHHGSRLQSQ
Trigger: CTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCGTAAGATAATGGGGATAACAAAGGAATCACAAGAGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
3UTR-3UTR CCA 90 bp CCGGCTCGGCCGCCTTGGGGCCCGAGAGCTCCACCCTCCGCAGGGACGCCTTGGTCCGGAGCCGGCCACTaGAGGTCCGCGTGCCTCCGT +
Preference number: 2 (lower is better)
Translates to: PARPPWGPRAPPSAGTPWSGAGH*RSACLR
Trigger: ACGGAGGCACGCGGACCTCCAGTGGCCGGCTCCGGA...CCAAGGCGTCCCTGCGGAGGGTGGAGCTCTCGGGCCCCAAGGCGGCCGAGCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591833.5
3UTR CAA 90 bp TCGGCCGCCTTGGGGCCCGAGAGCTCCACCCTCCGCAGGGACGCCTaGGGGGAGCGTTGGCTTAGGGAGTCCACATGGCGGGCCGAGGGT +
Preference number: 2 (lower is better)
Translates to: SAALGPESSTLRRDA*GERWLRESTWRAEG
Trigger: ACCCTCGGCCCGCCATGTGGACTCCCTAAGCCAACGCTCCCCCAAGGCGTCCCTGCGGAGGGTGGAGCTCTCGGGCCCCAAGGCGGCCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591833.5
3UTR-3UTR GCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCGCATCAGCAGCACCTaGAGCCCGGTGGGGGCGGGG +
Preference number: 2 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANRISST*SPVGAG
Trigger: CCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR CAA 90 bp ATGTCAATGGACAGCTCAGTGCGCCGGGACACCGGCTCGGCCGCCTaGGGGCCCGAGAGCTCCACCCTCCGCAGGGACGCCTTGGGGGAG +
Preference number: 2 (lower is better)
Translates to: MSMDSSVRRDTGSAA*GPESSTLRRDALGE
Trigger: CTCCCCCAAGGCGTCCCTGCGGAGGGTGGAGCTCTCGGGCCCCAAGGCGGCCGAGCCGGTGTCCCGGCGCACTGAGCTGTCCATTGACAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591833.5
3UTR-3UTR GCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACGGGCTCCTCTGCAAGTaGGAGGCCTGGCCCCCACCC +
Preference number: 2 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANGLLCK*EAWPPP
Trigger: GGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCC...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCCGAAGCTGCTCTTCTaGGCCCTCGGGGAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANPKLLF*ALGEPG
Trigger: GCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCAGGGCCGATGGGGATaGAGGGGAGCGTGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANQGRWG*RGACSP
Trigger: TGGGCTGCACGCTCCCCTCCATCCCCATCGGCCCTG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACGGGGCTTGGAGTGGCTaGGCAGTCGGTGGCAGGGGA +
Preference number: 2 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANGAWSG*AVGGRG
Trigger: TCCCCTGCCACCGACTGCCCAGCCACTCCAAGCCCC...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCCGAAGCTGCTCTTCTaGGCCCTCGGGGAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHPKLLF*ALGEPG
Trigger: GCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACGGGGTAGGGGCTGAGTaGTGGCCACACCATGTGGCG +
Preference number: 2 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANGVGAE*WPHHVA
Trigger: CGCCACATGGTGTGGCCATCACTCAGCCCCTACCCC...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATTGCAAGTGCGAGGCCTaGCCCCCACCCCAAGGCCTC +
Preference number: 2 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHCKCEA*PPPQGL
Trigger: GAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCA...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGGGGCTTGGAGTGGCTaGGCAGTCGGTGGCAGGGGA +
Preference number: 2 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLGAWSG*AVGGRG
Trigger: TCCCCTGCCACCGACTGCCCAGCCACTCCAAGCCCC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCCCAGGGGGCTTGGAGTaGCTGGGCAGTCGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLPGGLE*LGSRWQ
Trigger: CTGCCACCGACTGCCCAGCCACTCCAAGCCCCCTGG...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGGGGTAGGGGCTGAGTaGTGGCCACACCATGTGGCG +
Preference number: 2 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLGVGAE*WPHHVA
Trigger: CGCCACATGGTGTGGCCATCACTCAGCCCCTACCCC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACGGCAGGGGTAGGGGCTaGGTGATGGCCACACCATGT +
Preference number: 2 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANGRGRG*VMATPC
Trigger: ACATGGTGTGGCCATCACTCAGCCCCTACCCCTGCC...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGGATGGAGGGGAGCGTaGAGCCCACTGGGCTCCTCT +
Preference number: 2 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHGWRGA*SPLGSS
Trigger: AGAGGAGCCCAGTGGGCTGCACGCTCCCCTCCATCC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGGATGGAGGGGAGCGTaGAGCCCACTGGGCTCCTCT +
Preference number: 2 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLGWRGA*SPLGSS
Trigger: AGAGGAGCCCAGTGGGCTGCACGCTCCCCTCCATCC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACGGGACGGAAATGACTTaGGGGCAGGATCCCGGGGGT +
Preference number: 2 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANGTEMT*GQDPGG
Trigger: ACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCC...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACGGGACGGAAATGACTTaGGGGCAGGATCCCGGGGGT +
Preference number: 2 (lower is better)
Translates to: GSSAASPQPRGGRGLITDGTEMT*GQDPGG
Trigger: ACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCC...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
3UTR-3UTR CCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACGAGCGTGCAGCCCACTaGGCTCCTCTGCAAGTGCGA +
Preference number: 2 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANERAAH*APLQVR
Trigger: TCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTC...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACGGCGTGAGAGGGGGATaGCAGGGAGATGAAGACGCC +
Preference number: 2 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANGVRGG*QGDEDA
Trigger: GGCGTCTTCATCTCCCTGCCATCCCCCTCTCACGCC...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCAAGGCCTCCGGCACTaGGAACCCCACACAGACGGA +
Preference number: 2 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHQGLRH*EPHTDG
Trigger: TCCGTCTGTGTGGGGTTCTCAGTGCCGGAGGCCTTG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCTTCTCCCCTGGGCTCTaGCACACTCCAGGGGACAGG +
Preference number: 2 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLFSPGL*HTPGDR
Trigger: CCTGTCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAA...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACGGGATGGCAGGGAGATaGAGACGCCTCCCTCATTCC +
Preference number: 2 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANGMAGR*RRLPHS
Trigger: GGAATGAGGGAGGCGTCTTCATCTCCCTGCCATCCC...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATTGCCTGTGGCTCCAGTaGAGCCTCCCCACAACCTCG +
Preference number: 2 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHCLWLQ*SLPTTS
Trigger: CGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCA...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCTGCCTGTGGCTCCAGTaGAGCCTCCCCACAACCTCG +
Preference number: 2 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLCLWLQ*SLPTTS
Trigger: CGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCA...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGTGCTCCTGGTGGGCTaGATTCTCCCCTGGGCTCTG +
Preference number: 2 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLVLLVG*ILPWAL
Trigger: CAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCAC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCTGGCTGGGCAGTCGGTaGCAGGGGACCCTGGAGTTT +
Preference number: 2 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLWLGSR*QGTLEF
Trigger: AAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCA...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGGCGTGAGAGGGGGATaGCAGGGAGATGAAGACGCC +
Preference number: 2 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLGVRGG*QGDEDA
Trigger: GGCGTCTTCATCTCCCTGCCATCCCCCTCTCACGCC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATCCGAAGCTGCTCTTCTaGGCCCTCGGGGAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: TFSWLQAASPVPADAPGDPKLLF*ALGEPG
Trigger: GCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGG...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATCGTTACCATGGGCTCTaGGGGGAGGGGCCCAGGCAC +
Preference number: 2 (lower is better)
Translates to: TFSWLQAASPVPADAPGDRYHGL*GEGPRH
Trigger: GTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACG...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCTCTGCACACCGAAGCTaGTCTTCTGAGCCCTCGGGG +
Preference number: 2 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLSAHRS*SSEPSG
Trigger: CCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGA...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGCCACGGCCCACACGTaGCCCCGCCAACCTTCCTTC +
Preference number: 2 (lower is better)
Translates to: TFSWLQAASPVPADAPGDATAHT*PRQPSF
Trigger: GAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGGACGGAAATGACTTaGGGGCAGGATCCCGGGGGT +
Preference number: 2 (lower is better)
Translates to: SAASPQPRGGRGLITDSLGTEMT*GQDPGG
Trigger: ACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
3UTR-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGGCTGCATTCTCCCCTaGGCTCTGACACACTCCAGG +
Preference number: 2 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLGCILP*ALTHSR
Trigger: CCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATCCAGGGGGCTTGGAGTaGCTGGGCAGTCGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: TFSWLQAASPVPADAPGDPGGLE*LGSRWQ
Trigger: CTGCCACCGACTGCCCAGCCACTCCAAGCCCCCTGG...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATCCATGGGTCCCCTCGTaGGGACAGAGGGTGAGGGGC +
Preference number: 2 (lower is better)
Translates to: TFSWLQAASPVPADAPGDPWVPS*GQRVRG
Trigger: GCCCCTCACCCTCTGTCCCCACGAGGGGACCCATGG...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp ACCGGCTCGGCCGCCTTGGGGCCCGAGAGCTCCACCCTCCGCAGGGACGCCTTGAGATCTTTTCAAGGCTaGGCCACTGGAGTCACCAAG +
Preference number: 2 (lower is better)
Translates to: TGSAALGPESSTLRRDALRSFQG*ATGVTK
Trigger: CTTGGTGACTCCAGTGGCCCAGCCTTGAAAAGATCT...CAAGGCGTCCCTGCGGAGGGTGGAGCTCTCGGGCCCCAAGGCGGCCGAGCCGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591833.5
3UTR-3UTR TCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGGGGTAGGGGCTGAGTaGTGGCCACACCATGTGGCG +
Preference number: 2 (lower is better)
Translates to: TFSWLQAASPVPADAPGDGVGAE*WPHHVA
Trigger: CGCCACATGGTGTGGCCATCACTCAGCCCCTACCCC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACGATAAAGGCACTTTCTaGTCCAGGAGGGGCAGCTGC +
Preference number: 2 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANDKGTF*SRRGSC
Trigger: GCAGCTGCCCCTCCTGGAGCAGAAAGTGCCTTTATC...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGGGGCCGGGCCGTGCTaGCACGAAACCTTGCTCTTC +
Preference number: 2 (lower is better)
Translates to: TFSWLQAASPVPADAPGDGAGPC*HETLLF
Trigger: GAAGAGCAAGGTTTCGTGGCAGCACGGCCCGGCCCC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCCTTCCCTTGTTTCCTaGCAGCATGTCGAAGGGGTG +
Preference number: 2 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANPSLVS*QHVEGV
Trigger: CACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACGGTGGCAGGGGACCCTaGAGTTTTCTACCCTTAGGA +
Preference number: 2 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANGGRGP*SFLPLG
Trigger: TCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACC...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATAGCTGCCAGGGGGCTTaGAGTGGCTGGGCAGTCGGT +
Preference number: 2 (lower is better)
Translates to: TFSWLQAASPVPADAPGDSCQGA*SGWAVG
Trigger: ACCGACTGCCCAGCCACTCCAAGCCCCCTGGCAGCT...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp TTGGGGGAGCGTTGGCTTAGGGAGTCCACATGGCGGGCCGAGGGTTCTGAGTTCCCCTCCGGGGTGGGGTaGAGTTGGGTGTCTCGACCT +
Preference number: 2 (lower is better)
Translates to: LGERWLRESTWRAEGSEFPSGVG*SWVSRP
Trigger: AGGTCGAGACACCCAACTCCACCCCACCCCGGAGGG...GAACTCAGAACCCTCGGCCCGCCATGTGGACTCCCTAAGCCAACGCTCCCCCAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000591833.5
3UTR-3UTR CCA 90 bp TGGGGCCCGAGAGCTCCACCCTCCGCAGGGACGCCTTGGGGGAGCGTTGGCTTATTCACGCCCAGGTCCTaGAATTTCTGGGTGGAGCTG +
Preference number: 2 (lower is better)
Translates to: WGPRAPPSAGTPWGSVGLFTPRS*NFWVEL
Trigger: CAGCTCCACCCAGAAATTCCAGGACCTGGGCGTGAA...TAAGCCAACGCTCCCCCAAGGCGTCCCTGCGGAGGGTGGAGCTCTCGGGCCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591833.5
3UTR-3UTR TCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGCCGAAGCTGCTCTTCTaGGCCCTCGGGGAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGPKLLF*ALGEPG
Trigger: GCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGG...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCTGTCAATTCAGTGGGTaGTCTCACCCCTGCCTGTGG +
Preference number: 2 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLCQFSG*SHPCLW
Trigger: CCACAGGCAGGGGTGAGAGCACCCACTGAATTGACA...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATTGTCAATTCAGTGGGTaGTCTCACCCCTGCCTGTGG +
Preference number: 2 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHCQFSG*SHPCLW
Trigger: CCACAGGCAGGGGTGAGAGCACCCACTGAATTGACA...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCGGGCTCCTCTGCAAGTaGGAGGCCTGGCCCCCACCC +
Preference number: 2 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSGLLCK*EAWPPP
Trigger: GGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCC...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGCGCATCAGCAGCACCTaGAGCCCGGTGGGGGCGGGG +
Preference number: 2 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKRISST*SPVGAG
Trigger: CCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCG...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCACGGCCCACACGTaGCCCCGCCAACCTTCCTTC +
Preference number: 2 (lower is better)
Translates to: THTLLLADLLLAASSQPGATAHT*PRQPSF
Trigger: GAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGGGACGGAAATGACTTaGGGGCAGGATCCCGGGGGT +
Preference number: 2 (lower is better)
Translates to: TFSWLQAASPVPADAPGDGTEMT*GQDPGG
Trigger: ACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCCTTCCCTTGTTTCCTaGCAGCATGTCGAAGGGGTG +
Preference number: 2 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHPSLVS*QHVEGV
Trigger: CACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
3UTR-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCCTTCCCTTGTTTCCTaGCAGCATGTCGAAGGGGTG +
Preference number: 2 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHPSLVS*QHVEGV
Trigger: CACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACGTCATGTCAATTCAGTaGGTGCTCTCACCCCTGCCT +
Preference number: 2 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANVMSIQ*VLSPLP
Trigger: AGGCAGGGGTGAGAGCACCCACTGAATTGACATGAC...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGAGCGTGCAGCCCACTaGGCTCCTCTGCAAGTGCGA +
Preference number: 2 (lower is better)
Translates to: TFSWLQAASPVPADAPGDERAAH*APLQVR
Trigger: TCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGGTGGCAGGGGACCCTaGAGTTTTCTACCCTTAGGA +
Preference number: 2 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLGGRGP*SFLPLG
Trigger: TCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATTGGCTGGGCAGTCGGTaGCAGGGGACCCTGGAGTTT +
Preference number: 2 (lower is better)
Translates to: TFSWLQAASPVPADAPGDWLGSR*QGTLEF
Trigger: AAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCA...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGGGGCTTGGAGTGGCTaGGCAGTCGGTGGCAGGGGA +
Preference number: 2 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGGAWSG*AVGGRG
Trigger: TCCCCTGCCACCGACTGCCCAGCCACTCCAAGCCCC...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
63% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGGGGCTTGGAGTGGCTaGGCAGTCGGTGGCAGGGGA +
Preference number: 2 (lower is better)
Translates to: THTLLLADLLLAASSQPGGAWSG*AVGGRG
Trigger: TCCCCTGCCACCGACTGCCCAGCCACTCCAAGCCCC...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGGCGTGAGAGGGGGATaGCAGGGAGATGAAGACGCC +
Preference number: 2 (lower is better)
Translates to: TFSWLQAASPVPADAPGDGVRGG*QGDEDA
Trigger: GGCGTCTTCATCTCCCTGCCATCCCCCTCTCACGCC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTCCATGGGTCCCCTCGTaGGGACAGAGGGTGAGGGGC +
Preference number: 2 (lower is better)
Translates to: THTLLLADLLLAASSQPGPWVPS*GQRVRG
Trigger: GCCCCTCACCCTCTGTCCCCACGAGGGGACCCATGG...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGGGGTAGGGGCTGAGTaGTGGCCACACCATGTGGCG +
Preference number: 2 (lower is better)
Translates to: THTLLLADLLLAASSQPGGVGAE*WPHHVA
Trigger: CGCCACATGGTGTGGCCATCACTCAGCCCCTACCCC...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCCAGTCTGCGGATGGCTaGGATAAAGGCACTTTCTGC +
Preference number: 2 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLQSADG*DKGTFC
Trigger: GCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTG...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGGGATGGCAGGGAGATaGAGACGCCTCCCTCATTCC +
Preference number: 2 (lower is better)
Translates to: TFSWLQAASPVPADAPGDGMAGR*RRLPHS
Trigger: GGAATGAGGGAGGCGTCTTCATCTCCCTGCCATCCC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCCAGCTCACGCCACTCTaGCCAGCCCAAGCCACGGCC +
Preference number: 2 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSQLTPL*PAQATA
Trigger: GGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCTG...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCCGTTACCATGGGCTCTaGGGGGAGGGGCCCAGGCAC +
Preference number: 2 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSRYHGL*GEGPRH
Trigger: GTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACG...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATTGGACTGTGCACCCCTaGCGCCCGTTCTCTCCTTTC +
Preference number: 2 (lower is better)
Translates to: TFSWLQAASPVPADAPGDWTVHP*RPFSPF
Trigger: GAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCA...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCCACAGACGGATGATCTaGACACCGAAGCTGCTCTTC +
Preference number: 2 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLHRRMI*TPKLLF
Trigger: GAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTG...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGGGCTCCTCTGCAAGTaGGAGGCCTGGCCCCCACCC +
Preference number: 2 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKGLLCK*EAWPPP
Trigger: GGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGGATGGAGGGGAGCGTaGAGCCCACTGGGCTCCTCT +
Preference number: 2 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGGWRGA*SPLGSS
Trigger: AGAGGAGCCCAGTGGGCTGCACGCTCCCCTCCATCC...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACAGCATGTCGAAGGGGTaGGGAACGATGACAAATGGA +
Preference number: 2 (lower is better)
Translates to: GSSAASPQPRGGRGLITDSMSKG*GTMTNG
Trigger: TCCATTTGTCATCGTTCCCCACCCCTTCGACATGCT...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
3UTR-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAAGCATGTCGAAGGGGTaGGGAACGATGACAAATGGA +
Preference number: 2 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSSMSKG*GTMTNG
Trigger: TCCATTTGTCATCGTTCCCCACCCCTTCGACATGCT...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
3UTR-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCCTTCCCTTGTTTCCTaGCAGCATGTCGAAGGGGTG +
Preference number: 2 (lower is better)
Translates to: SAASPQPRGGRGLITDSLPSLVS*QHVEGV
Trigger: CACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
3UTR-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCCAGGGCCGATGGGGATaGAGGGGAGCGTGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSQGRWG*RGACSP
Trigger: TGGGCTGCACGCTCCCCTCCATCCCCATCGGCCCTG...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGAGCTGCCAGGGGGCTTaGAGTGGCTGGGCAGTCGGT +
Preference number: 2 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGSCQGA*SGWAVG
Trigger: ACCGACTGCCCAGCCACTCCAAGCCCCCTGGCAGCT...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGCAAGGCCTCCGGCACTaGGAACCCCACACAGACGGA +
Preference number: 2 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGQGLRH*EPHTDG
Trigger: TCCGTCTGTGTGGGGTTCTCAGTGCCGGAGGCCTTG...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTTTCTCCCCTGGGCTCTaGCACACTCCAGGGGACAGG +
Preference number: 2 (lower is better)
Translates to: THTLLLADLLLAASSQPGFSPGL*HTPGDR
Trigger: CCTGTCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAA...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCGGGGTAGGGGCTGAGTaGTGGCCACACCATGTGGCG +
Preference number: 2 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSGVGAE*WPHHVA
Trigger: CGCCACATGGTGTGGCCATCACTCAGCCCCTACCCC...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGCAGCTCACGCCACTCTaGCCAGCCCAAGCCACGGCC +
Preference number: 2 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKQLTPL*PAQATA
Trigger: GGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCTG...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGTGCCTGTGGCTCCAGTaGAGCCTCCCCACAACCTCG +
Preference number: 2 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGCLWLQ*SLPTTS
Trigger: CGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCA...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCGGGTGCTCTCACCCCTaGCTGTGGCTCCAGTGCAGC +
Preference number: 2 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSGCSHP*LWLQCS
Trigger: GCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCC...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCGGATGGAGGGGAGCGTaGAGCCCACTGGGCTCCTCT +
Preference number: 2 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSGWRGA*SPLGSS
Trigger: AGAGGAGCCCAGTGGGCTGCACGCTCCCCTCCATCC...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGTGCTCCTGGTGGGCTaGATTCTCCCCTGGGCTCTG +
Preference number: 2 (lower is better)
Translates to: THTLLLADLLLAASSQPGVLLVG*ILPWAL
Trigger: CAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCAC...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGCCACGGCCCACACGTaGCCCCGCCAACCTTCCTTC +
Preference number: 2 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKATAHT*PRQPSF
Trigger: GAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATTTCAGCTGTGGACTGTaGACCCCTGACGCCCGTTCT +
Preference number: 2 (lower is better)
Translates to: TFSWLQAASPVPADAPGDFSCGL*TPDARS
Trigger: AGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAA...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGAGCATGTCGAAGGGGTaGGGAACGATGACAAATGGA +
Preference number: 2 (lower is better)
Translates to: QPPHNLGEAAASSLTHSESMSKG*GTMTNG
Trigger: TCCATTTGTCATCGTTCCCCACCCCTTCGACATGCT...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
3UTR-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTAGCATGTCGAAGGGGTaGGGAACGATGACAAATGGA +
Preference number: 2 (lower is better)
Translates to: CGSSAASPQPRGGRGLITSMSKG*GTMTNG
Trigger: TCCATTTGTCATCGTTCCCCACCCCTTCGACATGCT...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
3UTR-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGTGCAAGTGCGAGGCCTaGCCCCCACCCCAAGGCCTC +
Preference number: 2 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKCKCEA*PPPQGL
Trigger: GAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCA...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGCAGGGCCGATGGGGATaGAGGGGAGCGTGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKQGRWG*RGACSP
Trigger: TGGGCTGCACGCTCCCCTCCATCCCCATCGGCCCTG...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCGATGGCCACACCATGTaGCGGGCAGGGGGTCCAGGT +
Preference number: 2 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSDGHTM*RAGGPG
Trigger: ACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGCCAGGGGGCTTGGAGTaGCTGGGCAGTCGGTGGCAG +
Preference number: 2 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKPGGLE*LGSRWQ
Trigger: CTGCCACCGACTGCCCAGCCACTCCAAGCCCCCTGG...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGGCGTGAGAGGGGGATaGCAGGGAGATGAAGACGCC +
Preference number: 2 (lower is better)
Translates to: THTLLLADLLLAASSQPGGVRGG*QGDEDA
Trigger: GGCGTCTTCATCTCCCTGCCATCCCCCTCTCACGCC...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATACACACACACTTCCCTaGTCACTTGGGCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: TFSWLQAASPVPADAPGDTHTLP*SLGQGR
Trigger: CCTGCCCTGCCCAAGTGACCAGGGAAGTGTGTGTGT...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCCAAGGCCTCCGGCACTaGGAACCCCACACAGACGGA +
Preference number: 2 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSQGLRH*EPHTDG
Trigger: TCCGTCTGTGTGGGGTTCTCAGTGCCGGAGGCCTTG...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCTTCTCCCCTGGGCTCTaGCACACTCCAGGGGACAGG +
Preference number: 2 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSFSPGL*HTPGDR
Trigger: CCTGTCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAA...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCGGCAGGGGTAGGGGCTaGGTGATGGCCACACCATGT +
Preference number: 2 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSGRGRG*VMATPC
Trigger: ACATGGTGTGGCCATCACTCAGCCCCTACCCCTGCC...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGGGATGGCAGGGAGATaGAGACGCCTCCCTCATTCC +
Preference number: 2 (lower is better)
Translates to: THTLLLADLLLAASSQPGGMAGR*RRLPHS
Trigger: GGAATGAGGGAGGCGTCTTCATCTCCCTGCCATCCC...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATTGTCAATTCAGTGGGTaGTCTCACCCCTGCCTGTGG +
Preference number: 2 (lower is better)
Translates to: TFSWLQAASPVPADAPGDCQFSG*SHPCLW
Trigger: CCACAGGCAGGGGTGAGAGCACCCACTGAATTGACA...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGTCTGCACACCGAAGCTaGTCTTCTGAGCCCTCGGGG +
Preference number: 2 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGSAHRS*SSEPSG
Trigger: CCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGA...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGGATGGAGGGGAGCGTaGAGCCCACTGGGCTCCTCT +
Preference number: 2 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKGWRGA*SPLGSS
Trigger: AGAGGAGCCCAGTGGGCTGCACGCTCCCCTCCATCC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCGTGCTCCTGGTGGGCTaGATTCTCCCCTGGGCTCTG +
Preference number: 2 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSVLLVG*ILPWAL
Trigger: CAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCAC...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGGGGCCGGGCCGTGCTaGCACGAAACCTTGCTCTTC +
Preference number: 2 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKGAGPC*HETLLF
Trigger: GAAGAGCAAGGTTTCGTGGCAGCACGGCCCGGCCCC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGACTTTGGTCATCTGTaGCCTGCAAAGACAGCCCCC +
Preference number: 2 (lower is better)
Translates to: TFSWLQAASPVPADAPGDDFGHL*PAKTAP
Trigger: GGGGGCTGTCTTTGCAGGGCACAGATGACCAAAGTC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCGGGACGGAAATGACTTaGGGGCAGGATCCCGGGGGT +
Preference number: 2 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSGTEMT*GQDPGG
Trigger: ACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCC...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCAGCATGTCGAAGGGGTaGGGAACGATGACAAATGGA +
Preference number: 2 (lower is better)
Translates to: SAASPQPRGGRGLITDSLSMSKG*GTMTNG
Trigger: TCCATTTGTCATCGTTCCCCACCCCTTCGACATGCT...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
3UTR-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGGTGGCAGGGGACCCTaGAGTTTTCTACCCTTAGGA +
Preference number: 2 (lower is better)
Translates to: TFSWLQAASPVPADAPGDGGRGP*SFLPLG
Trigger: TCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCCCCCACACAGACGGATaGTCTGCACACCGAAGCTGC +
Preference number: 2 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSPHTDG*SAHRSC
Trigger: GCAGCTTCGGTGTGCAGATCATCCGTCTGTGTGGGG...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGGTGATGTGTGCACCTaGGTGGAGTCTCATCAGGCC +
Preference number: 2 (lower is better)
Translates to: THTLLLADLLLAASSQPGGDVCT*VESHQA
Trigger: GGCCTGATGAGACTCCACTCAGGTGCACACATCACC...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGTGCCTGTGGCTCCAGTaGAGCCTCCCCACAACCTCG +
Preference number: 2 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKCLWLQ*SLPTTS
Trigger: CGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCA...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGGGCTCCTCTGCAAGTaGGAGGCCTGGCCCCCACCC +
Preference number: 2 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEGLLCK*EAWPPP
Trigger: GGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGTGCTCCTGGTGGGCTaGATTCTCCCCTGGGCTCTG +
Preference number: 2 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKVLLVG*ILPWAL
Trigger: CAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCAC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTTTCAGCTGTGGACTGTaGACCCCTGACGCCCGTTCT +
Preference number: 2 (lower is better)
Translates to: THTLLLADLLLAASSQPGFSCGL*TPDARS
Trigger: AGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAA...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTTGGTCATCTGTGCCCTaGAAAGACAGCCCCCATGGG +
Preference number: 2 (lower is better)
Translates to: THTLLLADLLLAASSQPGWSSVP*KDSPHG
Trigger: CCCATGGGGGCTGTCTTTGCAGGGCACAGATGACCA...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGAGCGTGCAGCCCACTaGGCTCCTCTGCAAGTGCGA +
Preference number: 2 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKERAAH*APLQVR
Trigger: TCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCGGCTGCATTCTCCCCTaGGCTCTGACACACTCCAGG +
Preference number: 2 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSGCILP*ALTHSR
Trigger: CCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCC...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGTGGCTGGGCAGTCGGTaGCAGGGGACCCTGGAGTTT +
Preference number: 2 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKWLGSR*QGTLEF
Trigger: AAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCA...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGGCGTGAGAGGGGGATaGCAGGGAGATGAAGACGCC +
Preference number: 2 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKGVRGG*QGDEDA
Trigger: GGCGTCTTCATCTCCCTGCCATCCCCCTCTCACGCC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTACACACACACTTCCCTaGTCACTTGGGCAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: THTLLLADLLLAASSQPGTHTLP*SLGQGR
Trigger: CCTGCCCTGCCCAAGTGACCAGGGAAGTGTGTGTGT...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGCAGCTCACGCCACTCTaGCCAGCCCAAGCCACGGCC +
Preference number: 2 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEQLTPL*PAQATA
Trigger: GGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCTG...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGTGGACTGTGCACCCCTaGCGCCCGTTCTCTCCTTTC +
Preference number: 2 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKWTVHP*RPFSPF
Trigger: GAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCA...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGTGTCAATTCAGTGGGTaGTCTCACCCCTGCCTGTGG +
Preference number: 2 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGCQFSG*SHPCLW
Trigger: CCACAGGCAGGGGTGAGAGCACCCACTGAATTGACA...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGATAAAGGCACTTTCTaGTCCAGGAGGGGCAGCTGC +
Preference number: 2 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGDKGTF*SRRGSC
Trigger: GCAGCTGCCCCTCCTGGAGCAGAAAGTGCCTTTATC...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACTCCACCAGACTCACTTaGTTAGACCTTTTCAAAACT +
Preference number: 2 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANSTRLT*LDLFKT
Trigger: AGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGA...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCTGGTCATCTGTGCCCTaGAAAGACAGCCCCCATGGG +
Preference number: 2 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSWSSVP*KDSPHG
Trigger: CCCATGGGGGCTGTCTTTGCAGGGCACAGATGACCA...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGACTTTGGTCATCTGTaGCCTGCAAAGACAGCCCCC +
Preference number: 2 (lower is better)
Translates to: THTLLLADLLLAASSQPGDFGHL*PAKTAP
Trigger: GGGGGCTGTCTTTGCAGGGCACAGATGACCAAAGTC...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATAGCATGTCGAAGGGGTaGGGAACGATGACAAATGGA +
Preference number: 2 (lower is better)
Translates to: TFSWLQAASPVPADAPGDSMSKG*GTMTNG
Trigger: TCCATTTGTCATCGTTCCCCACCCCTTCGACATGCT...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGCCTTCCCTTGTTTCCTaGCAGCATGTCGAAGGGGTG +
Preference number: 2 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGPSLVS*QHVEGV
Trigger: CACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGG...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGTGCAAGTGCGAGGCCTaGCCCCCACCCCAAGGCCTC +
Preference number: 2 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGECKCEA*PPPQGL
Trigger: GAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCA...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGCAGGGCCGATGGGGATaGAGGGGAGCGTGCAGCCCA +
Preference number: 2 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEQGRWG*RGACSP
Trigger: TGGGCTGCACGCTCCCCTCCATCCCCATCGGCCCTG...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGGCTGCATTCTCCCCTaGGCTCTGACACACTCCAGG +
Preference number: 2 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKGCILP*ALTHSR
Trigger: CCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGGGGCTTGGAGTGGCTaGGCAGTCGGTGGCAGGGGA +
Preference number: 2 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEGAWSG*AVGGRG
Trigger: TCCCCTGCCACCGACTGCCCAGCCACTCCAAGCCCC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGCACAGACGGATGATCTaGACACCGAAGCTGCTCTTC +
Preference number: 2 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGHRRMI*TPKLLF
Trigger: GAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTG...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGGATGGAGGGGAGCGTaGAGCCCACTGGGCTCCTCT +
Preference number: 2 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEGWRGA*SPLGSS
Trigger: AGAGGAGCCCAGTGGGCTGCACGCTCCCCTCCATCC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCGATAAAGGCACTTTCTaGTCCAGGAGGGGCAGCTGC +
Preference number: 2 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSDKGTF*SRRGSC
Trigger: GCAGCTGCCCCTCCTGGAGCAGAAAGTGCCTTTATC...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCTCCACCAGACTCACTTaGTTAGACCTTTTCAAAACT +
Preference number: 2 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLSTRLT*LDLFKT
Trigger: AGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGA...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGTTCAGCTGTGGACTGTaGACCCCTGACGCCCGTTCT +
Preference number: 2 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKFSCGL*TPDARS
Trigger: AGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAA...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCTGCCACGAAACCTTaGTCTTCAGCTGTGGACTGT +
Preference number: 2 (lower is better)
Translates to: THTLLLADLLLAASSQPGAATKP*SSAVDC
Trigger: ACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGC...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCCCTTCCCTTGTTTCCTaGCAGCATGTCGAAGGGGTG +
Preference number: 2 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSPSLVS*QHVEGV
Trigger: CACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGG...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGTCATGTCAATTCAGTaGGTGCTCTCACCCCTGCCT +
Preference number: 2 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGVMSIQ*VLSPLP
Trigger: AGGCAGGGGTGAGAGCACCCACTGAATTGACATGAC...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGATGGCCACACCATGTaGCGGGCAGGGGGTCCAGGT +
Preference number: 2 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEDGHTM*RAGGPG
Trigger: ACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCGGTGGCAGGGGACCCTaGAGTTTTCTACCCTTAGGA +
Preference number: 2 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSGGRGP*SFLPLG
Trigger: TCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACC...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCCACAGACGGATGATCTaGACACCGAAGCTGCTCTTC +
Preference number: 2 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSHRRMI*TPKLLF
Trigger: GAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTG...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGACTTTGGTCATCTGTaGCCTGCAAAGACAGCCCCC +
Preference number: 2 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKDFGHL*PAKTAP
Trigger: GGGGGCTGTCTTTGCAGGGCACAGATGACCAAAGTC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGAGCATGTCGAAGGGGTaGGGAACGATGACAAATGGA +
Preference number: 2 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGSMSKG*GTMTNG
Trigger: TCCATTTGTCATCGTTCCCCACCCCTTCGACATGCT...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGGTGGCAGGGGACCCTaGAGTTTTCTACCCTTAGGA +
Preference number: 2 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKGGRGP*SFLPLG
Trigger: TCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGTGGCAGGGGTGGCTaGCTGGGCATTAATGTAACT +
Preference number: 2 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSSGRGG*LGINVT
Trigger: AGTTACATTAATGCCCAGCCAGCCACCCCTGCCACT...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGCATGTCGAAGGGGTaGGGAACGATGACAAATGGA +
Preference number: 2 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSSMSKG*GTMTNG
Trigger: TCCATTTGTCATCGTTCCCCACCCCTTCGACATGCT...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGGCTGCATTCTCCCCTaGGCTCTGACACACTCCAGG +
Preference number: 2 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEGCILP*ALTHSR
Trigger: CCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATTCCACCAGACTCACTTaGTTAGACCTTTTCAAAACT +
Preference number: 2 (lower is better)
Translates to: TFSWLQAASPVPADAPGDSTRLT*LDLFKT
Trigger: AGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGA...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGTTCAGCTGTGGACTGTaGACCCCTGACGCCCGTTCT +
Preference number: 2 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEFSCGL*TPDARS
Trigger: AGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAA...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGAGTCAGACGCCCAGTaGCCCAACTTCCATGCACAC +
Preference number: 2 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEESDAQ*PNFHAH
Trigger: GTGTGCATGGAAGTTGGGGCACTGGGCGTCTGACTC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGAGCATGTCGAAGGGGTaGGGAACGATGACAAATGGA +
Preference number: 2 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKSMSKG*GTMTNG
Trigger: TCCATTTGTCATCGTTCCCCACCCCTTCGACATGCT...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGATAAAGGCACTTTCTaGTCCAGGAGGGGCAGCTGC +
Preference number: 2 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEDKGTF*SRRGSC
Trigger: GCAGCTGCCCCTCCTGGAGCAGAAAGTGCCTTTATC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGCCTTCCCTTGTTTCCTaGCAGCATGTCGAAGGGGTG +
Preference number: 2 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEPSLVS*QHVEGV
Trigger: CACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGG...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGGTGGCAGGGGACCCTaGAGTTTTCTACCCTTAGGA +
Preference number: 2 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEGGRGP*SFLPLG
Trigger: TCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR TCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGCAGTCTGCGGATGGCTaGGATAAAGGCACTTTCTGC +
Preference number: 2 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEQSADG*DKGTFC
Trigger: GCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTG...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGCACAGACGGATGATCTaGACACCGAAGCTGCTCTTC +
Preference number: 2 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEHRRMI*TPKLLF
Trigger: GAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTG...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGTCCACCAGACTCACTTaGTTAGACCTTTTCAAAACT +
Preference number: 2 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGSTRLT*LDLFKT
Trigger: AGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGA...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGCTGCCACGAAACCTTaGTCTTCAGCTGTGGACTGT +
Preference number: 2 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEAATKP*SSAVDC
Trigger: ACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGTCATGTCAATTCAGTaGGTGCTCTCACCCCTGCCT +
Preference number: 2 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEVMSIQ*VLSPLP
Trigger: AGGCAGGGGTGAGAGCACCCACTGAATTGACATGAC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGAGCAGGAAGGGACTTTaGTCATCTGTGCCCTGCAAA +
Preference number: 2 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGESRKGL*SSVPCK
Trigger: TTTGCAGGGCACAGATGACCAAAGTCCCTTCCTGCT...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR GCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGTCCACCAGACTCACTTaGTTAGACCTTTTCAAAACT +
Preference number: 2 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGESTRLT*LDLFKT
Trigger: AGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGA...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR CCA 72 bp TGGGGCCCGAGAGCTCCACCCTCCGCAGGGACGCCTTaGGGGAGCGTTGGCTTAGGGAGTCCACATGGCGGG +
Preference number: 3 (lower is better)
Translates to: WGPRAPPSAGTP*GSVGLGSPHGG
Trigger: CCCGCCATGTGGACTCCCTAAGCCAACGCTCCCCCAAGGCGTCCCTGCGGAGGGTGGAGCTCTCGGGCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591833.5
3UTR-3UTR CAA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGGGGACGGAAATGACTaGGGGGCAGGATCCCGGGGG +
Preference number: 3 (lower is better)
Translates to: CGSSAASPQPRGGRGLITGDGND*GAGSRG
Trigger: CCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCC...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
3UTR GCA 72 bp GAGGGTGAGGGGCCGGGCCGTGCTGCCACGAAACCTTaGTCTTCAGCTGTGGACTGTGCACCCCTGACGCCC +
Preference number: 3 (lower is better)
Translates to: EGEGPGRAATKP*SSAVDCAPLTP
Trigger: GGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCACGGCCCGGCCCCTCACCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CAA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGGGAGGCCCCTTCCCTaGTTTCCTGGCAGCATGTCG +
Preference number: 3 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHGRPLP*FPGSMS
Trigger: CGACATGCTGCCAGGAAACAAGGGAAGGGGCCTCCC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
3UTR-3UTR CAA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGGGAGGCCCCTTCCCTaGTTTCCTGGCAGCATGTCG +
Preference number: 3 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLGRPLP*FPGSMS
Trigger: CGACATGCTGCCAGGAAACAAGGGAAGGGGCCTCCC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CAA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGGGAGGCCCCTTCCCTaGTTTCCTGGCAGCATGTCG +
Preference number: 3 (lower is better)
Translates to: CGSSAASPQPRGGRGLITGRPLP*FPGSMS
Trigger: CGACATGCTGCCAGGAAACAAGGGAAGGGGCCTCCC...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
3UTR-3UTR CAA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATCAGCTGCCAGGGGGCTaGGAGTGGCTGGGCAGTCGG +
Preference number: 3 (lower is better)
Translates to: TFSWLQAASPVPADAPGDQLPGG*EWLGSR
Trigger: CCGACTGCCCAGCCACTCCAAGCCCCCTGGCAGCTG...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CAA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGGGGACGGAAATGACTaGGGGGCAGGATCCCGGGGG +
Preference number: 3 (lower is better)
Translates to: TFSWLQAASPVPADAPGDGDGND*GAGSRG
Trigger: CCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CAA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGGAGGCCCCTTCCCTaGTTTCCTGGCAGCATGTCG +
Preference number: 3 (lower is better)
Translates to: SAASPQPRGGRGLITDSLGRPLP*FPGSMS
Trigger: CGACATGCTGCCAGGAAACAAGGGAAGGGGCCTCCC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
3UTR CCA 72 bp GACGCCTTGGGGGAGCGTTGGCTTAGGGAGTCCACATaGCGGGCCGAGGGTTCTGAGTTCTTCACGCCCAGG +
Preference number: 3 (lower is better)
Translates to: DALGERWLREST*RAEGSEFFTPR
Trigger: CCTGGGCGTGAAGAACTCAGAACCCTCGGCCCGCCATGTGGACTCCCTAAGCCAACGCTCCCCCAAGGCGTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591833.5
3UTR-3UTR CAA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTCAGCTGCCAGGGGGCTaGGAGTGGCTGGGCAGTCGG +
Preference number: 3 (lower is better)
Translates to: THTLLLADLLLAASSQPGQLPGG*EWLGSR
Trigger: CCGACTGCCCAGCCACTCCAAGCCCCCTGGCAGCTG...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR TCA 72 bp GCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTaGTGTGTGCACCTGAGTGGAGTCTCATCAGGCCCC +
Preference number: 3 (lower is better)
Translates to: ASSQPGACRCTW*CVHLSGVSSGP
Trigger: GGGGCCTGATGAGACTCCACTCAGGTGCACACATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR CCA 72 bp CGGGCCGAGGGTTCTGAGTTCTTCACGCCCAGGTCCTaGAATTTCTGGGTGGAGCTGGCCACAGTGGCTCGG +
Preference number: 3 (lower is better)
Translates to: RAEGSEFFTPRS*NFWVELATVAR
Trigger: CCGAGCCACTGTGGCCAGCTCCACCCAGAAATTCCAGGACCTGGGCGTGAAGAACTCAGAACCCTCGGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591833.5
3UTR-3UTR CAA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGGGGACGGAAATGACTaGGGGGCAGGATCCCGGGGG +
Preference number: 3 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGGDGND*GAGSRG
Trigger: CCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCC...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
63% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CAA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCCAGCTGCCAGGGGGCTaGGAGTGGCTGGGCAGTCGG +
Preference number: 3 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSQLPGG*EWLGSR
Trigger: CCGACTGCCCAGCCACTCCAAGCCCCCTGGCAGCTG...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR TCA 72 bp CCGGTGCCTGCAGATGCACCTGGTGATGTGTGCACCTaGGTGGAGTCTCATCAGGCCCCTCTTTCTCCCCAG +
Preference number: 3 (lower is better)
Translates to: PVPADAPGDVCT*VESHQAPLSPQ
Trigger: CTGGGGAGAAAGAGGGGCCTGATGAGACTCCACTCAGGTGCACACATCACCAGGTGCATCTGCAGGCACCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CAA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGGGGACGGAAATGACTaGGGGGCAGGATCCCGGGGG +
Preference number: 3 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEGDGND*GAGSRG
Trigger: CCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
3UTR-3UTR CAA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCGGGAGGCCCCTTCCCTaGTTTCCTGGCAGCATGTCG +
Preference number: 3 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSGRPLP*FPGSMS
Trigger: CGACATGCTGCCAGGAAACAAGGGAAGGGGCCTCCC...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CAA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCTCCACCAGACTCACTaGCTTAGACCTTTTCAAAAC +
Preference number: 3 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANLHQTH*LRPFQN
Trigger: GTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CAA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATTGCTGCCACGAAACCTaGCTCTTCAGCTGTGGACTG +
Preference number: 3 (lower is better)
Translates to: TFSWLQAASPVPADAPGDCCHET*LFSCGL
Trigger: CAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCA...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR CCA 72 bp TGCCTGCAGATGCACCTGGTGATGTGTGCACCTGAGTaGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGC +
Preference number: 3 (lower is better)
Translates to: CLQMHLVMCAPE*SLIRPLFLPRS
Trigger: GCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCCACTCAGGTGCACACATCACCAGGTGCATCTGCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CAA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGGGAGGCCCCTTCCCTaGTTTCCTGGCAGCATGTCG +
Preference number: 3 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKGRPLP*FPGSMS
Trigger: CGACATGCTGCCAGGAAACAAGGGAAGGGGCCTCCC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CAA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGCAGCTGCCAGGGGGCTaGGAGTGGCTGGGCAGTCGG +
Preference number: 3 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEQLPGG*EWLGSR
Trigger: CCGACTGCCCAGCCACTCCAAGCCCCCTGGCAGCTG...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CAA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATAACTACAGCCCAGTCTaGGGCCAAACCCAGACACTA +
Preference number: 3 (lower is better)
Translates to: TFSWLQAASPVPADAPGDNYSPV*GQTQTL
Trigger: TAGTGTCTGGGTTTGGCCCAAGACTGGGCTGTAGTT...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CAA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGGGGACGGAAATGACTaGGGGGCAGGATCCCGGGGG +
Preference number: 3 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEGDGND*GAGSRG
Trigger: CCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR GCA 72 bp TGCTGCCACGAAACCTTGCTCTTCAGCTGTGGACTGTaGACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGT +
Preference number: 3 (lower is better)
Translates to: CCHETLLFSCGL*TPDARSLLSRG
Trigger: ACCCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CAA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGAACTACAGCCCAGTCTaGGGCCAAACCCAGACACTA +
Preference number: 3 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGNYSPV*GQTQTL
Trigger: TAGTGTCTGGGTTTGGCCCAAGACTGGGCTGTAGTT...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CAA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTAACTACAGCCCAGTCTaGGGCCAAACCCAGACACTA +
Preference number: 3 (lower is better)
Translates to: THTLLLADLLLAASSQPGNYSPV*GQTQTL
Trigger: TAGTGTCTGGGTTTGGCCCAAGACTGGGCTGTAGTT...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR CCA 72 bp CCAGACACTAGACAGACAGACGGACACGCATACACATaGACACACACACACTTCCCTGGTCACTTGGGCAGG +
Preference number: 3 (lower is better)
Translates to: PDTRQTDGHAYT*THTHFPGHLGR
Trigger: CCTGCCCAAGTGACCAGGGAAGTGTGTGTGTGTCCATGTGTATGCGTGTCCGTCTGTCTGTCTAGTGTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CAA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGAACTACAGCCCAGTCTaGGGCCAAACCCAGACACTA +
Preference number: 3 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKNYSPV*GQTQTL
Trigger: TAGTGTCTGGGTTTGGCCCAAGACTGGGCTGTAGTT...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR CCA 72 bp TTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTaGTCCCCGAACCCTGGTGTGTCAATCACTGTCAGC +
Preference number: 3 (lower is better)
Translates to: FMMGCQQFSLLM*SPNPGVSITVS
Trigger: GCTGACAGTGATTGACACACCAGGGTTCGGGGACCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588575.1
3UTR-3UTR CAA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTCTCCACCAGACTCACTaGCTTAGACCTTTTCAAAAC +
Preference number: 3 (lower is better)
Translates to: THTLLLADLLLAASSQPGLHQTH*LRPFQN
Trigger: GTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAG...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CAA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCCTCCACCAGACTCACTaGCTTAGACCTTTTCAAAAC +
Preference number: 3 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSLHQTH*LRPFQN
Trigger: GTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAG...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR-3UTR CAA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGTGCTGCCACGAAACCTaGCTCTTCAGCTGTGGACTG +
Preference number: 3 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGECCHET*LFSCGL
Trigger: CAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCA...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
3UTR CCA 72 bp TGTGATTCCTTTGTTATCCCCATTATCTTACGAAAATaGGGCGTAGACGCTGGGCACCACGGCTCACGTCTG +
Preference number: 3 (lower is better)
Translates to: CDSFVIPIILRK*GVDAGHHGSRL
Trigger: CAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCGTAAGATAATGGGGATAACAAAGGAATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
3UTR-3UTR CAA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGCTCCACCAGACTCACTaGCTTAGACCTTTTCAAAAC +
Preference number: 3 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGELHQTH*LRPFQN
Trigger: GTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAG...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACCGATGTCCAGGGGCCTaGGGGAGTGGCCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDRCPGA*GSGRWR
Trigger: CCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCG...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACGATGTCCAGGGGCCTaGGGGAGTGGCCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSRCPGA*GSGRWR
Trigger: CCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCG...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACCGCATCAGCAGCACCTaGAGCCCGGTGGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDRISST*SPVGAG
Trigger: CCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCG...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACCGCGCCCGCGCTCCTaGAGTGCAGAGCTAGCCGCC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSPRPRS*SAELAA
Trigger: GGCGGCTAGCTCTGCACTGCAGGAGCGCGGGCGCGG...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423034.6
CDS-3UTR CCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCTCCAAGGTCTGGGCTaGGCTGGGGGCGGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANLQGLG*AGGGGR
Trigger: GCGCCCACCGCCCCCAGCCCAGCCCAGACCTTGGAG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR TCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAACACCTCGGCCCTCTTaGGCCCGAACCGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSTPRPS*ARTGTG
Trigger: GCCCGTCCCGGTTCGGGCTCAAGAGGGCCGAGGTGT...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR TCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCGATGTCCAGGGGCCTaGGGGAGTGGCCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSERCPGA*GSGRWR
Trigger: CCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCGATGTCCAGGGGCCTaGGGGAGTGGCCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITRCPGA*GSGRWR
Trigger: CCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCG...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACGGGCTCCTCTGCAAGTaGGAGGCCTGGCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDGLLCK*EAWPPP
Trigger: GGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCC...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCGCATCAGCAGCACCTaGAGCCCGGTGGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHRISST*SPVGAG
Trigger: CCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCCCGCGCTCCTGCAGTaGAGAGCTAGCCGCCGGAGG +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANPALLQ*RASRRR
Trigger: CCTCCGGCGGCTAGCTCTGCACTGCAGGAGCGCGGG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423034.6
CDS-3UTR GCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACAGCGGAACGTCGGGCTaGGCTGGACGCGCCGAGAGC +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDSGTSG*AGRAES
Trigger: GCTCTCGGCGCGTCCAGCGCAGCCCGACGTTCCGCT...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591088.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACGGTGGCAGGGGCAGTaGGCACCTCGGGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSRWQGQ*APRGPW
Trigger: CCAAGGTCCCCGAGGTGCCCACTGCCCCTGCCACCG...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTGGGGGCTGCGTCGGTaGCAGGGGCAGTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDWGLRR*QGQWAP
Trigger: AGGTGCCCACTGCCCCTGCCACCGACGCAGCCCCCA...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCTGGGCTGGGGGCGGTaGGCGCCTCAGCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHLGWGR*APQQAW
Trigger: CCAAGCCTGCTGAGGCGCCCACCGCCCCCAGCCCAG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCTGGGCTGGGGGCGGTaGGCGCCTCAGCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITLGWGR*APQQAW
Trigger: CCAAGCCTGCTGAGGCGCCCACCGCCCCCAGCCCAG...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCTGGGCTGGGGGCGGTaGGCGCCTCAGCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHLGWGR*APQQAW
Trigger: CCAAGCCTGCTGAGGCGCCCACCGCCCCCAGCCCAG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCTCCAAGGTCTGGGCTaGGCTGGGGGCGGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHLQGLG*AGGGGR
Trigger: GCGCCCACCGCCCCCAGCCCAGCCCAGACCTTGGAG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCTCCAAGGTCTGGGCTaGGCTGGGGGCGGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHLQGLG*AGGGGR
Trigger: GCGCCCACCGCCCCCAGCCCAGCCCAGACCTTGGAG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCTCCAAGGTCTGGGCTaGGCTGGGGGCGGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITLQGLG*AGGGGR
Trigger: GCGCCCACCGCCCCCAGCCCAGCCCAGACCTTGGAG...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACCGGGGGTGGGCAGGGTaGCGTCTACATCTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDRGWAG*RLHLRG
Trigger: GCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCG...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGCTCCCAGGAAAGTGTaGCGGCGAGGCAGCGGGGCG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSAPRKV*RRGSGA
Trigger: CGCCCCGCTGCCTCGCCGCCACACTTTCCTGGGAGC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591198.5
CDS-3UTR CCA 90 bp AAGGCTGGGCCACTGGAGTCACCAAGCCTCCGGAGCCGGCCACTGGAGGTCCGCTCCGGAGCCGGCCACTaGAGGTCCGCGTGCCTCCGT +
Preference number: 4 (lower is better)
Translates to: KAGPLESPSLRSRPLEVRSGAGH*RSACLR
Trigger: ACGGAGGCACGCGGACCTCCAGTGGCCGGCTCCGGA...GCGGACCTCCAGTGGCCGGCTCCGGAGGCTTGGTGACTCCAGTGGCCCAGCCTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS-3UTR TCA 90 bp AGGCTGGGCCACTGGAGTCACCAAGCCTCCGGAGCCGGCCACTGGAGGTCCGCGGCGGGCCGAGGGTTCTaGGTTCTTCACGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: RLGHWSHQASGAGHWRSAAGRGF*VLHAQV
Trigger: GACCTGGGCGTGAAGAACTCAGAACCCTCGGCCCGC...CGCGGACCTCCAGTGGCCGGCTCCGGAGGCTTGGTGACTCCAGTGGCCCAGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS-3UTR TCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATACACCTCGGCCCTCTTaGGCCCGAACCGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHTPRPS*ARTGTG
Trigger: GCCCGTCCCGGTTCGGGCTCAAGAGGGCCGAGGTGT...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR TCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGACACCTCGGCCCTCTTaGGCCCGAACCGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSETPRPS*ARTGTG
Trigger: GCCCGTCCCGGTTCGGGCTCAAGAGGGCCGAGGTGT...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR TCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAATGCAGGCGCCTGCTTaGGCCCGGCATCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSMQAPA*ARHLWG
Trigger: CCCCCAGAGATGCCGGGCTCAAGCAGGCGCCTGCAT...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACATGCAGGCGCCTGCTTaGGCCCGGCATCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDMQAPA*ARHLWG
Trigger: CCCCCAGAGATGCCGGGCTCAAGCAGGCGCCTGCAT...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCGATGTCCAGGGGCCTaGGGGAGTGGCCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLRCPGA*GSGRWR
Trigger: CCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACCCGAAGCTGCTCTTCTaGGCCCTCGGGGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDPKLLF*ALGEPG
Trigger: GCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGG...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACCGAAGCTGCTCTTCTaGGCCCTCGGGGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSPKLLF*ALGEPG
Trigger: GCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGG...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCAGCTCACGCCACTCTaGCCAGCCCAAGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANQLTPL*PAQATA
Trigger: GGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCTG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCGTTACCATGGGCTCTaGGGGGAGGGGCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANRYHGL*GEGPRH
Trigger: GTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACCGTTACCATGGGCTCTaGGGGGAGGGGCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDRYHGL*GEGPRH
Trigger: GTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACG...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCACCCTCTTGGGGGCTaGGTCGGTGGCAGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANHPLGG*VGGRGS
Trigger: ACTGCCCCTGCCACCGACGCAGCCCCCAAGAGGGTG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR GCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGGGCTCCTCTGCAAGTaGGAGGCCTGGCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHGLLCK*EAWPPP
Trigger: GGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGGGCTCCTCTGCAAGTaGGAGGCCTGGCCCCCACCC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHGLLCK*EAWPPP
Trigger: GGGTGGGGGCCAGGCCTCGCACTTGCAGAGGAGCCC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACACCGGGACGGGCCGATaGCCCCGGCGTTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHTGTGR*PRRSPP
Trigger: AGGTGGAGAACGCCGGGGCCATCGGCCCGTCCCGGT...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGCACCTCGGGGACCTTaGAGGCAGGGGGCTCCATCC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSAPRGP*RQGAPS
Trigger: GGATGGAGCCCCCTGCCTCCAAGGTCCCCGAGGTGC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCGGTGGCAGGGGCAGTaGGCACCTCGGGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITRWQGQ*APRGPW
Trigger: CCAAGGTCCCCGAGGTGCCCACTGCCCCTGCCACCG...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCGGTGGCAGGGGCAGTaGGCACCTCGGGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHRWQGQ*APRGPW
Trigger: CCAAGGTCCCCGAGGTGCCCACTGCCCCTGCCACCG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTGGGGGCTGCGTCGGTaGCAGGGGCAGTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHWGLRR*QGQWAP
Trigger: AGGTGCCCACTGCCCCTGCCACCGACGCAGCCCCCA...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCTGGGCTGGGGGCGGTaGGCGCCTCAGCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLLGWGR*APQQAW
Trigger: CCAAGCCTGCTGAGGCGCCCACCGCCCCCAGCCCAG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCTCCAAGGTCTGGGCTaGGCTGGGGGCGGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLLQGLG*AGGGGR
Trigger: GCGCCCACCGCCCCCAGCCCAGCCCAGACCTTGGAG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACCAGGGGGCTGGGGCTTaGGCTCCAGCCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDQGAGA*APACSA
Trigger: TGCAGAGCAGGCTGGAGCCCAAGCCCCAGCCCCCTG...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATTGGGAGCCGCCTCAGTaGCCTCCTGGCTCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHWEPPQ*PPGSGV
Trigger: CACCCCGGAGCCAGGAGGCCACTGAGGCGGCTCCCA...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCTGGGAGCCGCCTCAGTaGCCTCCTGGCTCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLWEPPQ*PPGSGV
Trigger: CACCCCGGAGCCAGGAGGCCACTGAGGCGGCTCCCA...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTTGGGAGCCGCCTCAGTaGCCTCCTGGCTCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITWEPPQ*PPGSGV
Trigger: CACCCCGGAGCCAGGAGGCCACTGAGGCGGCTCCCA...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAAGGGGCCTGAGGGAGTaGCCGGTGGCGGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSRGLRE*PVAGMK
Trigger: CTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCT...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACAGGGGCCTGAGGGAGTaGCCGGTGGCGGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDRGLRE*PVAGMK
Trigger: CTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCT...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACAGGGGCCTGAGGGAGTaGCCGGTGGCGGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANRGLRE*PVAGMK
Trigger: CTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCT...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCGGGGGTGGGCAGGGTaGCGTCTACATCTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSERGWAG*RLHLRG
Trigger: GCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCCGGGGGTGGGCAGGGTaGCGTCTACATCTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLRGWAG*RLHLRG
Trigger: GCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCG...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCGGGGGTGGGCAGGGTaGCGTCTACATCTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHRGWAG*RLHLRG
Trigger: GCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCGGGGGTGGGCAGGGTaGCGTCTACATCTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITRGWAG*RLHLRG
Trigger: GCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCG...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGGGGCTTGGAGTGGCTaGGCAGTCGGTGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSGAWSG*AVGGRG
Trigger: TCCCCTGCCACCGACTGCCCAGCCACTCCAAGCCCC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCCATGGGTCCCCTCGTaGGGACAGAGGGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANPWVPS*GQRVRG
Trigger: GCCCCTCACCCTCTGTCCCCACGAGGGGACCCATGG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGTCCGGAGCCGGCCACTaGAGGTCCGCGTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSESGAGH*RSACLL
Trigger: CAGGAGGCACGCGGACCTCCAGTGGCCGGCTCCGGA...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427177.6
ENST00000449803.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCAACGTCGGGCTGCGCTaGACGCGCCGAGAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLNVGLR*TRREPR
Trigger: CCGCGGCTCTCGGCGCGTCCAGCGCAGCCCGACGTT...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591088.5
CDS-3UTR TCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACGCGGGCCGAGGGTTCTaGGTTCTTCACGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANAGRGF*VLHAQV
Trigger: GACCTGGGCGTGAAGAACTCAGAACCCTCGGCCCGC...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR TCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACATGCAGGCGCCTGCTTaGGCCCGGCATCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHMQAPA*ARHLWG
Trigger: CCCCCAGAGATGCCGGGCTCAAGCAGGCGCCTGCAT...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCATGCAGGCGCCTGCTTaGGCCCGGCATCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLMQAPA*ARHLWG
Trigger: CCCCCAGAGATGCCGGGCTCAAGCAGGCGCCTGCAT...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGATGCAGGCGCCTGCTTaGGCCCGGCATCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEMQAPA*ARHLWG
Trigger: CCCCCAGAGATGCCGGGCTCAAGCAGGCGCCTGCAT...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACGGGGATGCGCTCCTCTaGGGTGGGCTGCACCGACTT +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANGDALL*GGLHRL
Trigger: AAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCC...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCCCTCTCCTCCAGGGTaGGTGTGTCCGCCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANPSPPG*VCPPWR
Trigger: TCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACCGCTGCTGCCCTCGTTaGGGCGCTTCACACGGTACG +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDRCCPR*GASHGT
Trigger: CGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCG...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCGCTGCTGCCCTCGTTaGGGCGCTTCACACGGTACG +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANRCCPR*GASHGT
Trigger: CGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACGCTGCTGCCCTCGTTaGGGCGCTTCACACGGTACG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSRCCPR*GASHGT
Trigger: CGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCG...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCCGAAGCTGCTCTTCTaGGCCCTCGGGGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHPKLLF*ALGEPG
Trigger: GCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCCGAAGCTGCTCTTCTaGGCCCTCGGGGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEPKLLF*ALGEPG
Trigger: GCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGGGGTAGGGGCTGAGTaGTGGCCACACCATGTGGCG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSGVGAE*WPHHVA
Trigger: CGCCACATGGTGTGGCCATCACTCAGCCCCTACCCC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCAGCTCACGCCACTCTaGCCAGCCCAAGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHQLTPL*PAQATA
Trigger: GGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCTG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCCAGCTCACGCCACTCTaGCCAGCCCAAGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLQLTPL*PAQATA
Trigger: GGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCTG...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCGTTACCATGGGCTCTaGGGGGAGGGGCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHRYHGL*GEGPRH
Trigger: GTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCTCTGCAGGCTCCCCTaGATCCAGACCCTGGGGCCA +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANLCRLP*IQTLGP
Trigger: TGGCCCCAGGGTCTGGATTCAGGGGAGCCTGCAGAG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACAATGGACAGCTCAGTaGGCCGGGACACCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSQWTAQ*AGTPAR
Trigger: CCGAGCCGGTGTCCCGGCGCACTGAGCTGTCCATTG...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR GCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCAATGGACAGCTCAGTaGGCCGGGACACCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANQWTAQ*AGTPAR
Trigger: CCGAGCCGGTGTCCCGGCGCACTGAGCTGTCCATTG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR GCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCACCCTCTTGGGGGCTaGGTCGGTGGCAGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEHPLGG*VGGRGS
Trigger: ACTGCCCCTGCCACCGACGCAGCCCCCAAGAGGGTG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR GCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACGGGTGCTCTCACCCCTaGCTGTGGCTCCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDGCSHP*LWLQCS
Trigger: GCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCC...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGGGTGCTCTCACCCCTaGCTGTGGCTCCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSGCSHP*LWLQCS
Trigger: GCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGGATGGAGGGGAGCGTaGAGCCCACTGGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSGWRGA*SPLGSS
Trigger: AGAGGAGCCCAGTGGGCTGCACGCTCCCCTCCATCC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACGGATGGAGGGGAGCGTaGAGCCCACTGGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDGWRGA*SPLGSS
Trigger: AGAGGAGCCCAGTGGGCTGCACGCTCCCCTCCATCC...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGCCACGGCCCACACGTaGCCCCGCCAACCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHATAHT*PRQPSF
Trigger: GAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGCCACGGCCCACACGTaGCCCCGCCAACCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLATAHT*PRQPSF
Trigger: GAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGCCACGGCCCACACGTaGCCCCGCCAACCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHATAHT*PRQPSF
Trigger: GAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCTCGCAACCAGGGCTTaGCCTCCCCGCTCCCACACA +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANLATRA*PPRSHT
Trigger: TGTGTGGGAGCGGGGAGGGCAAGCCCTGGTTGCGAG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGCCCGGTCTGGTCGGTaGCTGCAGAGGTCCCGAGTG +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEARSGR*LQRSRV
Trigger: CACTCGGGACCTCTGCAGCCACCGACCAGACCGGGC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACCCCTCCGGGGTGGGGTaGAGTTGGGTGTCTCGACCT +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDPSGVG*SWVSRP
Trigger: AGGTCGAGACACCCAACTCCACCCCACCCCGGAGGG...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACCCTCCGGGGTGGGGTaGAGTTGGGTGTCTCGACCT +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSPSGVG*SWVSRP
Trigger: AGGTCGAGACACCCAACTCCACCCCACCCCGGAGGG...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGGACCCTCCGGGGTaGGGTGGAGTTGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSLDPPG*GGVGCL
Trigger: GAGACACCCAACTCCACCCCACCCCGGAGGGTCCAG...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCATCCGCAGGGACGCCTTaGGGGAGCGTTGGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSSAGTP*GSVGLG
Trigger: CCCTAAGCCAACGCTCCCCCAAGGCGTCCCTGCGGA...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp AAGGCTGGGCCACTGGAGTCACCAAGCCTCCGGAGCCGGCCACTGGAGGTCCGCTCCGCAGGGACGCCTTaGGGGAGCGTTGGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: KAGPLESPSLRSRPLEVRSAGTP*GSVGLG
Trigger: CCCTAAGCCAACGCTCCCCCAAGGCGTCCCTGCGGA...GCGGACCTCCAGTGGCCGGCTCCGGAGGCTTGGTGACTCCAGTGGCCCAGCCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCACCGGGACGGGCCGATaGCCCCGGCGTTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLTGTGR*PRRSPP
Trigger: AGGTGGAGAACGCCGGGGCCATCGGCCCGTCCCGGT...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGCACCTCGGGGACCTTaGAGGCAGGGGGCTCCATCC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEAPRGP*RQGAPS
Trigger: GGATGGAGCCCCCTGCCTCCAAGGTCCCCGAGGTGC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGCACCTCGGGGACCTTaGAGGCAGGGGGCTCCATCC +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLAPRGP*RQGAPS
Trigger: GGATGGAGCCCCCTGCCTCCAAGGTCCCCGAGGTGC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCAGGGGGCTGGGGCTTaGGCTCCAGCCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHQGAGA*APACSA
Trigger: TGCAGAGCAGGCTGGAGCCCAAGCCCCAGCCCCCTG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCAGGGGGCTGGGGCTTaGGCTCCAGCCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITQGAGA*APACSA
Trigger: TGCAGAGCAGGCTGGAGCCCAAGCCCCAGCCCCCTG...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGCCTCAGTGGCCTCCTaGCTCCGGGGTGTAGCCTCA +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSASVAS*LRGVAS
Trigger: TGAGGCTACACCCCGGAGCCAGGAGGCCACTGAGGC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTGGGAGCCGCCTCAGTaGCCTCCTGGCTCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLWEPPQ*PPGSGV
Trigger: CACCCCGGAGCCAGGAGGCCACTGAGGCGGCTCCCA...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCATGTCGCCAACGCAGCTaGGAGCCGCCTCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSCRQRS*EPPQWP
Trigger: AGGCCACTGAGGCGGCTCCCAGCTGCGTTGGCGACA...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591198.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCATGCGCTCCTCTGAGGTaGGCTGCACCGACTTCCGGC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSCAPLR*AAPTSG
Trigger: GCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCA...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTGCGCTCCTCTGAGGTaGGCTGCACCGACTTCCGGC +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDCAPLR*AAPTSG
Trigger: GCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCA...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACAGGGGCCTGAGGGAGTaGCCGGTGGCGGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHRGLRE*PVAGMK
Trigger: CTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCT...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGAGGGGCCTGAGGGAGTaGCCGGTGGCGGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSERGLRE*PVAGMK
Trigger: CTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCT...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCTGCAAGTGCGAGGCCTaGCCCCCACCCCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLCKCEA*PPPQGL
Trigger: GAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCA...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCCAGGGCCGATGGGGATaGAGGGGAGCGTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLQGRWG*RGACSP
Trigger: TGGGCTGCACGCTCCCCTCCATCCCCATCGGCCCTG...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGATGGCCACACCATGTaGCGGGCAGGGGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSDGHTM*RAGGPG
Trigger: ACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCCAGGGGGCTTGGAGTaGCTGGGCAGTCGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHPGGLE*LGSRWQ
Trigger: CTGCCACCGACTGCCCAGCCACTCCAAGCCCCCTGG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCCAGGGGGCTTGGAGTaGCTGGGCAGTCGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEPGGLE*LGSRWQ
Trigger: CTGCCACCGACTGCCCAGCCACTCCAAGCCCCCTGG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCCAGGGGGCTTGGAGTaGCTGGGCAGTCGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITPGGLE*LGSRWQ
Trigger: CTGCCACCGACTGCCCAGCCACTCCAAGCCCCCTGG...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCCATGGGTCCCCTCGTaGGGACAGAGGGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHPWVPS*GQRVRG
Trigger: GCCCCTCACCCTCTGTCCCCACGAGGGGACCCATGG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCCATGGGTCCCCTCGTaGGGACAGAGGGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEPWVPS*GQRVRG
Trigger: GCCCCTCACCCTCTGTCCCCACGAGGGGACCCATGG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCCCATGGGTCCCCTCGTaGGGACAGAGGGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLPWVPS*GQRVRG
Trigger: GCCCCTCACCCTCTGTCCCCACGAGGGGACCCATGG...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCACCCCGGCCCAGCGTaGGCCCAGCAGTCTCCTTAC +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHHPGPA*AQQSPY
Trigger: GTAAGGAGACTGCTGGGCCCACGCTGGGCCGGGGTG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGGGACCTCGACTGCCTaGGAAGGGAGGCTCGGTGGG +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEGTSTA*EGRLGG
Trigger: CCCACCGAGCCTCCCTTCCCAGGCAGTCGAGGTCCC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591088.5
3UTR CAA 72 bp TTGGGGCCCGAGAGCTCCACCCTCCGCAGGGACGCCTaGGGGGAGCGTTGGCTTAGGGAGTCCACATGGCGG +
Preference number: 4 (lower is better)
Translates to: LGPESSTLRRDA*GERWLRESTWR
Trigger: CCGCCATGTGGACTCCCTAAGCCAACGCTCCCCCAAGGCGTCCCTGCGGAGGGTGGAGCTCTCGGGCCCCAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS-3UTR TCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGCGGGCCGAGGGTTCTaGGTTCTTCACGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEAGRGF*VLHAQV
Trigger: GACCTGGGCGTGAAGAACTCAGAACCCTCGGCCCGC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR TCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGCGGGCCGAGGGTTCTaGGTTCTTCACGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHAGRGF*VLHAQV
Trigger: GACCTGGGCGTGAAGAACTCAGAACCCTCGGCCCGC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR TCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCATGCAGGCGCCTGCTTaGGCCCGGCATCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLMQAPA*ARHLWG
Trigger: CCCCCAGAGATGCCGGGCTCAAGCAGGCGCCTGCAT...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGGCCTTCTCGTTCCGTaGTGCAGGCGCCTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSGLLVP*CRRLLE
Trigger: CTCAAGCAGGCGCCTGCATCACGGAACGAGAAGGCC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACGGCCTTCTCGTTCCGTaGTGCAGGCGCCTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDGLLVP*CRRLLE
Trigger: CTCAAGCAGGCGCCTGCATCACGGAACGAGAAGGCC...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGGGGATGCGCTCCTCTaGGGTGGGCTGCACCGACTT +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHGDALL*GGLHRL
Trigger: AAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGGGGATGCGCTCCTCTaGGGTGGGCTGCACCGACTT +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLGDALL*GGLHRL
Trigger: AAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGGGGATGCGCTCCTCTaGGGTGGGCTGCACCGACTT +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEGDALL*GGLHRL
Trigger: AAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATCGATGTCCAGGGGCCTaGGGGAGTGGCCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDRCPGA*GSGRWR
Trigger: CCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCG...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACCGATGTCCAGGGGCCTaGGGGAGTGGCCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHRCPGA*GSGRWR
Trigger: CCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCG...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR TCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCCCTCTCCTCCAGGGTaGGTGTGTCCGCCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHPSPPG*VCPPWR
Trigger: TCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCCCCTCTCCTCCAGGGTaGGTGTGTCCGCCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLPSPPG*VCPPWR
Trigger: TCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGG...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCCCTCTCCTCCAGGGTaGGTGTGTCCGCCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEPSPPG*VCPPWR
Trigger: TCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCCCTCTCCTCCAGGGTaGGTGTGTCCGCCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHPSPPG*VCPPWR
Trigger: TCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCCCTCTCCTCCAGGGTaGGTGTGTCCGCCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITPSPPG*VCPPWR
Trigger: TCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGG...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCCGCTGCTGCCCTCGTTaGGGCGCTTCACACGGTACG +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLRCCPR*GASHGT
Trigger: CGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCG...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCGCTGCTGCCCTCGTTaGGGCGCTTCACACGGTACG +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITRCCPR*GASHGT
Trigger: CGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCG...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCGCTGCTGCCCTCGTTaGGGCGCTTCACACGGTACG +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHRCCPR*GASHGT
Trigger: CGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCGCTGCTGCCCTCGTTaGGGCGCTTCACACGGTACG +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSERCCPR*GASHGT
Trigger: CGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACCAAGGCCTCCGGCACTaGGAACCCCACACAGACGGA +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDQGLRH*EPHTDG
Trigger: TCCGTCTGTGTGGGGTTCTCAGTGCCGGAGGCCTTG...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACAAGGCCTCCGGCACTaGGAACCCCACACAGACGGA +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSQGLRH*EPHTDG
Trigger: TCCGTCTGTGTGGGGTTCTCAGTGCCGGAGGCCTTG...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCAAGGCCTCCGGCACTaGGAACCCCACACAGACGGA +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANQGLRH*EPHTDG
Trigger: TCCGTCTGTGTGGGGTTCTCAGTGCCGGAGGCCTTG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCATTCTCCCCTGGGCTCTaGCACACTCCAGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSFSPGL*HTPGDR
Trigger: CCTGTCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAA...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACTTCTCCCCTGGGCTCTaGCACACTCCAGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANFSPGL*HTPGDR
Trigger: CCTGTCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAA...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGGGGTAGGGGCTGAGTaGTGGCCACACCATGTGGCG +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEGVGAE*WPHHVA
Trigger: CGCCACATGGTGTGGCCATCACTCAGCCCCTACCCC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGGGGTAGGGGCTGAGTaGTGGCCACACCATGTGGCG +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITGVGAE*WPHHVA
Trigger: CGCCACATGGTGTGGCCATCACTCAGCCCCTACCCC...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGGGGTAGGGGCTGAGTaGTGGCCACACCATGTGGCG +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHGVGAE*WPHHVA
Trigger: CGCCACATGGTGTGGCCATCACTCAGCCCCTACCCC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACGGCAGGGGTAGGGGCTaGGTGATGGCCACACCATGT +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDGRGRG*VMATPC
Trigger: ACATGGTGTGGCCATCACTCAGCCCCTACCCCTGCC...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACCTGGCTCAGCTGAATaGATGGGGGAGGAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSPGSAE*MGEEGG
Trigger: CCCGCCTTCCTCCCCCATTCATTCAGCTGAGCCAGG...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000423034.6
CDS-3UTR TCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGCAGCCTGGCCCATATaGTCTTCACAGGCAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSAAWPI*SSQAGP
Trigger: GGGGCCTGCCTGTGAAGATCATATGGGCCAGGCTGC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427674.6
CDS-3UTR TCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACAGACACAAAGGCCACTaGAGGCCCCGGGCCAACACC +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANRHKGH*RPRANT
Trigger: GGTGTTGGCCCGGGGCCTTCAGTGGCCTTTGTGTCT...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431235.6
ENST00000449803.6
CDS-3UTR GCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCAATGGACAGCTCAGTaGGCCGGGACACCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITQWTAQ*AGTPAR
Trigger: CCGAGCCGGTGTCCCGGCGCACTGAGCTGTCCATTG...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACGTGATGCAGGCGCCTaGTTGAGCCCGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSRDAGA*LSPASL
Trigger: CAGAGATGCCGGGCTCAAGCAGGCGCCTGCATCACG...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCATGCCTGTGGCTCCAGTaGAGCCTCCCCACAACCTCG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSCLWLQ*SLPTTS
Trigger: CGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCA...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTGCCTGTGGCTCCAGTaGAGCCTCCCCACAACCTCG +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDCLWLQ*SLPTTS
Trigger: CGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCA...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGGGTGCTCTCACCCCTaGCTGTGGCTCCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHGCSHP*LWLQCS
Trigger: GCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGGGTGCTCTCACCCCTaGCTGTGGCTCCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITGCSHP*LWLQCS
Trigger: GCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCC...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGGATGGAGGGGAGCGTaGAGCCCACTGGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEGWRGA*SPLGSS
Trigger: AGAGGAGCCCAGTGGGCTGCACGCTCCCCTCCATCC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGTGCTCCTGGTGGGCTaGATTCTCCCCTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSVLLVG*ILPWAL
Trigger: CAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCAC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACGTGCTCCTGGTGGGCTaGATTCTCCCCTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANVLLVG*ILPWAL
Trigger: CAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCAC...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATCGCATCAGCAGCACCTaGAGCCCGGTGGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDRISST*SPVGAG
Trigger: CCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCG...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGCCACGGCCCACACGTaGCCCCGCCAACCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLATAHT*PRQPSF
Trigger: GAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGGGGCCGGGCCGTGCTaGCACGAAACCTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEGAGPC*HETLLF
Trigger: GAAGAGCAAGGTTTCGTGGCAGCACGGCCCGGCCCC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACATCTCAAGGCTGGGATaGTGCTGCCCACCCCCACCC +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANISRLG*CCPPPP
Trigger: GGGTGGGGGTGGGCAGCAGCATCCCAGCCTTGAGAT...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACATGATCCCATCCAGCTaGGCGTTGACCGCGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANMIPSS*ALTAGS
Trigger: GGACCCCGCGGTCAACGCGCAGCTGGATGGGATCAT...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000423034.6
CDS-3UTR GCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCGGCGAAGACTTCCTTaGCTCCATCCACCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHRRRLP*LHPPRP
Trigger: GGGCCGGGGTGGATGGAGGCAAGGAAGTCTTCGCCG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR GCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCCCAGCCACTCCAGATaGTTCCCGTGGACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANPSHSR*FPWTSC
Trigger: GCAGCTGGTCCACGGGAAGCATCTGGAGTGGCTGGG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427674.6
CDS-3UTR GCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGGCTCGGTGGGGAATTaGTCCAAGGGGGCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHGSVGN*SKGAGR
Trigger: TCGCCCTGCCCCCTTGGAGCAATTCCCCACCGAGCC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000591088.5
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGTACCCCAACGTGGCTaGGCAGGAGGAACGGCCGTG +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHVPQRG*AGGTAV
Trigger: CACGGCCGTTCCTCCTGCCCAGCCACGTTGGGGTAC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCTGGACCCTCCGGGGTaGGGTGGAGTTGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHLDPPG*GGVGCL
Trigger: GAGACACCCAACTCCACCCCACCCCGGAGGGTCCAG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCTGGACCCTCCGGGGTaGGGTGGAGTTGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHLDPPG*GGVGCL
Trigger: GAGACACCCAACTCCACCCCACCCCGGAGGGTCCAG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCTGGACCCTCCGGGGTaGGGTGGAGTTGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSELDPPG*GGVGCL
Trigger: GAGACACCCAACTCCACCCCACCCCGGAGGGTCCAG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCTGGACCCTCCGGGGTaGGGTGGAGTTGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITLDPPG*GGVGCL
Trigger: GAGACACCCAACTCCACCCCACCCCGGAGGGTCCAG...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATTCCGCAGGGACGCCTTaGGGGAGCGTTGGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHSAGTP*GSVGLG
Trigger: CCCTAAGCCAACGCTCCCCCAAGGCGTCCCTGCGGA...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACGGTTCTGGCGTCTTGTaGCCCAACACCTCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDGSGVL*PNTSAL
Trigger: GAGGGCCGAGGTGTTGGGCCACAAGACGCCAGAACC...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCCGAGGGGCCGGTTCTaGCGTCTTGTGGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITPRGRF*RLVAQH
Trigger: GTGTTGGGCCACAAGACGCCAGAACCGGCCCCTCGG...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCCGAGGGGCCGGTTCTaGCGTCTTGTGGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEPRGRF*RLVAQH
Trigger: GTGTTGGGCCACAAGACGCCAGAACCGGCCCCTCGG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGGATCTCCACCCTCTTaGGGGCTGCGTCGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLGSPPS*GLRRWQ
Trigger: CTGCCACCGACGCAGCCCCCAAGAGGGTGGAGATCC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGGATCTCCACCCTCTTaGGGGCTGCGTCGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHGSPPS*GLRRWQ
Trigger: CTGCCACCGACGCAGCCCCCAAGAGGGTGGAGATCC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGGATCTCCACCCTCTTaGGGGCTGCGTCGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITGSPPS*GLRRWQ
Trigger: CTGCCACCGACGCAGCCCCCAAGAGGGTGGAGATCC...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACGCGCCTCAGCAGGCTTaGGCATCTGGATCTCCACCC +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDAPQQA*ASGSPP
Trigger: GGGTGGAGATCCAGATGCCCAAGCCTGCTGAGGCGC...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATCTGGGCTGGGGGCGGTaGGCGCCTCAGCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDLGWGR*APQQAW
Trigger: CCAAGCCTGCTGAGGCGCCCACCGCCCCCAGCCCAG...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATCTCCAAGGTCTGGGCTaGGCTGGGGGCGGTGGGCGC +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDLQGLG*AGGGGR
Trigger: GCGCCCACCGCCCCCAGCCCAGCCCAGACCTTGGAG...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCAGGGGGCTGGGGCTTaGGCTCCAGCCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLQGAGA*APACSA
Trigger: TGCAGAGCAGGCTGGAGCCCAAGCCCCAGCCCCCTG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGCCTCAGTGGCCTCCTaGCTCCGGGGTGTAGCCTCA +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHASVAS*LRGVAS
Trigger: TGAGGCTACACCCCGGAGCCAGGAGGCCACTGAGGC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGCCTCAGTGGCCTCCTaGCTCCGGGGTGTAGCCTCA +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHASVAS*LRGVAS
Trigger: TGAGGCTACACCCCGGAGCCAGGAGGCCACTGAGGC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTGTCGCCAACGCAGCTaGGAGCCGCCTCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHCRQRS*EPPQWP
Trigger: AGGCCACTGAGGCGGCTCCCAGCTGCGTTGGCGACA...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591198.5
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGTGTCGCCAACGCAGCTaGGAGCCGCCTCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSECRQRS*EPPQWP
Trigger: AGGCCACTGAGGCGGCTCCCAGCTGCGTTGGCGACA...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591198.5
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTGCGCTCCTCTGAGGTaGGCTGCACCGACTTCCGGC +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHCAPLR*AAPTSG
Trigger: GCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCA...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATTGCGCTCCTCTGAGGTaGGCTGCACCGACTTCCGGC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHCAPLR*AAPTSG
Trigger: GCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCA...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCTCCTCCATGCCGTTaGCCATGGCGCTGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDSPPCR*PWRCCP
Trigger: AGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGA...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTGCAAGTGCGAGGCCTaGCCCCCACCCCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLCKCEA*PPPQGL
Trigger: GAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCA...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000592951.5
CDS-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACGAGCGTGCAGCCCACTaGGCTCCTCTGCAAGTGCGA +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDERAAH*APLQVR
Trigger: TCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTC...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGAGCGTGCAGCCCACTaGGCTCCTCTGCAAGTGCGA +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSERAAH*APLQVR
Trigger: TCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCAGGGCCGATGGGGATaGAGGGGAGCGTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLQGRWG*RGACSP
Trigger: TGGGCTGCACGCTCCCCTCCATCCCCATCGGCCCTG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGATGGCCACACCATGTaGCGGGCAGGGGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEDGHTM*RAGGPG
Trigger: ACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGATGGCCACACCATGTaGCGGGCAGGGGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHDGHTM*RAGGPG
Trigger: ACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTGGCTGGGCAGTCGGTaGCAGGGGACCCTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDWLGSR*QGTLEF
Trigger: AAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCA...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCATGGCTGGGCAGTCGGTaGCAGGGGACCCTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSWLGSR*QGTLEF
Trigger: AAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCA...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATAGCTGCCAGGGGGCTTaGAGTGGCTGGGCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHSCQGA*SGWAVG
Trigger: ACCGACTGCCCAGCCACTCCAAGCCCCCTGGCAGCT...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTAGCTGCCAGGGGGCTTaGAGTGGCTGGGCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITSCQGA*SGWAVG
Trigger: ACCGACTGCCCAGCCACTCCAAGCCCCCTGGCAGCT...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGGCGTGAGAGGGGGATaGCAGGGAGATGAAGACGCC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSGVRGG*QGDEDA
Trigger: GGCGTCTTCATCTCCCTGCCATCCCCCTCTCACGCC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCCATGGGTCCCCTCGTaGGGACAGAGGGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLPWVPS*GQRVRG
Trigger: GCCCCTCACCCTCTGTCCCCACGAGGGGACCCATGG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACACATGGCCTGGGCCCTaGCGCTGGCCACTCATTTCC +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANTWPGP*RWPLIS
Trigger: GGAAATGAGTGGCCAGCGCCAGGGCCCAGGCCATGT...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCGACATGATGGCTGGTaGGCAGCGGGTCGCGCGGAG +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLRHDGW*AAGRAE
Trigger: CTCCGCGCGACCCGCTGCCCACCAGCCATCATGTCG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423034.6
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTAACCCCAGGCCGGGGTaGGGTAGGAGTCAGCGAGAG +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITNPRPG*GRSQRE
Trigger: CTCTCGCTGACTCCTACCCCACCCCGGCCTGGGGTT...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGTGTCGCCAACGCAGCTaGGAGCCGCCTCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSECRQRS*EPPQWL
Trigger: CAGCCACTGAGGCGGCTCCCAGCTGCGTTGGCGACA...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585930.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGCCCACCGGGTCACATaGCTCAGAGCCGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHAHRVT*LRAEQR
Trigger: CCTCTGCTCGGCTCTGAGCCATGTGACCCGGTGGGC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591088.5
CDS-3UTR CCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACAACGTCGGGCTGCGCTaGACGCGCCGAGAGCCGCGG +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHNVGLR*TRREPR
Trigger: CCGCGGCTCTCGGCGCGTCCAGCGCAGCCCGACGTT...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTGTCGCCAACGCAGCTaGGAGCCGCCTCAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLCRQRS*EPPQWP
Trigger: GGGCCACTGAGGCGGCTCCCAGCTGCGTTGGCGACA...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591088.5
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGTGGCTGTGGGACGCTaGGAGCCTCCAGGGTGGTCA +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHVAVGR*EPPGWS
Trigger: TGACCACCCTGGAGGCTCCCAGCGTCCCACAGCCAC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592951.5
CDS-3UTR TCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACCATCCTCCGGTGGGCTaGCTCCTGGGGTTTGACGAT +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDHPPVG*LLGFDD
Trigger: ATCGTCAAACCCCAGGAGTCAGCCCACCGGAGGATG...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR TCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACACAGGGGCAGGCTCTaGATTCTCCAAGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSHRGRL*ILQGLG
Trigger: GCCCAGACCTTGGAGAATTCAGAGCCTGCCCCTGTG...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR TCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGGCCTTCTCGTTCCGTaGTGCAGGCGCCTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEGLLVP*CRRLLE
Trigger: CTCAAGCAGGCGCCTGCATCACGGAACGAGAAGGCC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGGGATGCGCTCCTCTaGGGTGGGCTGCACCGACTT +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLGDALL*GGLHRL
Trigger: AAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCCCTCTCCTCCAGGGTaGGTGTGTCCGCCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLPSPPG*VCPPWR
Trigger: TCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCGCTGCTGCCCTCGTTaGGGCGCTTCACACGGTACG +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLRCCPR*GASHGT
Trigger: CGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACCCCCACACAGACGGATaGTCTGCACACCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDPHTDG*SAHRSC
Trigger: GCAGCTTCGGTGTGCAGATCATCCGTCTGTGTGGGG...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCCCCACACAGACGGATaGTCTGCACACCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANPHTDG*SAHRSC
Trigger: GCAGCTTCGGTGTGCAGATCATCCGTCTGTGTGGGG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACCCCACACAGACGGATaGTCTGCACACCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSPHTDG*SAHRSC
Trigger: GCAGCTTCGGTGTGCAGATCATCCGTCTGTGTGGGG...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCAAGGCCTCCGGCACTaGGAACCCCACACAGACGGA +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEQGLRH*EPHTDG
Trigger: TCCGTCTGTGTGGGGTTCTCAGTGCCGGAGGCCTTG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGGCAGGGGTAGGGGCTaGGTGATGGCCACACCATGT +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHGRGRG*VMATPC
Trigger: ACATGGTGTGGCCATCACTCAGCCCCTACCCCTGCC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGGCAGGGGTAGGGGCTaGGTGATGGCCACACCATGT +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEGRGRG*VMATPC
Trigger: ACATGGTGTGGCCATCACTCAGCCCCTACCCCTGCC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACGGGATGGCAGGGAGATaGAGACGCCTCCCTCATTCC +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDGMAGR*RRLPHS
Trigger: GGAATGAGGGAGGCGTCTTCATCTCCCTGCCATCCC...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGGGATGGCAGGGAGATaGAGACGCCTCCCTCATTCC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSGMAGR*RRLPHS
Trigger: GGAATGAGGGAGGCGTCTTCATCTCCCTGCCATCCC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACTGGACTGTGCACCCCTaGCGCCCGTTCTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANWTVHP*RPFSPF
Trigger: GAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCA...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCCACCAGTGGGGGTGGTaGGGGGTCCTTCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLHQWGW*GVLPLL
Trigger: CAAGAGAGGAAGGACCCCTCACCACCCCCACTGGTG...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCACCAGTGGGGGTGGTaGGGGGTCCTTCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHHQWGW*GVLPLL
Trigger: CAAGAGAGGAAGGACCCCTCACCACCCCCACTGGTG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCACCAGTGGGGGTGGTaGGGGGTCCTTCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHHQWGW*GVLPLL
Trigger: CAAGAGAGGAAGGACCCCTCACCACCCCCACTGGTG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTAGCCCAGTTCCTGCGTaGCTGCCTCGCCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITSPVPA*LPRLPL
Trigger: CAGAGGAAGGCGAGGCAGGCACGCAGGAACTGGGCT...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS-3UTR GCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCGTGATGCAGGCGCCTaGTTGAGCCCGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSERDAGA*LSPASL
Trigger: CAGAGATGCCGGGCTCAAGCAGGCGCCTGCATCACG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCGTGATGCAGGCGCCTaGTTGAGCCCGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHRDAGA*LSPASL
Trigger: CAGAGATGCCGGGCTCAAGCAGGCGCCTGCATCACG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACGGGGGTACACGTCGATaGCGTTGGACAGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDGGTRR*RWTAGL
Trigger: CAGACCTGCTGTCCAACGGCATCGACGTGTACCCCC...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGGGGGTACACGTCGATaGCGTTGGACAGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSGGTRR*RWTAGL
Trigger: CAGACCTGCTGTCCAACGGCATCGACGTGTACCCCC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTTGCCTGTGGCTCCAGTaGAGCCTCCCCACAACCTCG +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITCLWLQ*SLPTTS
Trigger: CGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCA...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGGTGCTCTCACCCCTaGCTGTGGCTCCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLGCSHP*LWLQCS
Trigger: GCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCTGCACACCGAAGCTaGTCTTCTGAGCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDSAHRS*SSEPSG
Trigger: CCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGA...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGTGCTCCTGGTGGGCTaGATTCTCCCCTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHVLLVG*ILPWAL
Trigger: CAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCAC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGTGCTCCTGGTGGGCTaGATTCTCCCCTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITVLLVG*ILPWAL
Trigger: CAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCAC...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGTGCTCCTGGTGGGCTaGATTCTCCCCTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHVLLVG*ILPWAL
Trigger: CAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCAC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGATCTCAAGGCTGGGATaGTGCTGCCCACCCCCACCC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEISRLG*CCPPPP
Trigger: GGGTGGGGGTGGGCAGCAGCATCCCAGCCTTGAGAT...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCATCTCAAGGCTGGGATaGTGCTGCCCACCCCCACCC +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLISRLG*CCPPPP
Trigger: GGGTGGGGGTGGGCAGCAGCATCCCAGCCTTGAGAT...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAAAGACTTCTTCATGGTaGCTCCGTGGCCGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSKTSSW*LRGRRS
Trigger: GGAGCGGCGGCCACGGAGGCACCATGAAGAAGTCTT...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427177.6
ENST00000591198.5
CDS-3UTR GCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACATCCTGGGGAAGCCCTaGCTCGCAACCAGGGCTTGC +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHILGKP*LATRAC
Trigger: GCAAGCCCTGGTTGCGAGGCAGGGCTTCCCCAGGAT...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR GCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACAGCGGAACGTCGGGCTaGGCTGGACGCGCCGAGAGC +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHSGTSG*AGRAES
Trigger: GCTCTCGGCGCGTCCAGCGCAGCCCGACGTTCCGCT...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CCA 90 bp CGCCTTGGGGCCCGAGAGCTCCACCCTCCGCAGGGACGCCTTGGGGGAGCGTTGTTCACGCCCAGGTCCTaGAATTTCTGGGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: RLGARELHPPQGRLGGALFTPRS*NFWVEL
Trigger: CAGCTCCACCCAGAAATTCCAGGACCTGGGCGTGAA...CAACGCTCCCCCAAGGCGTCCCTGCGGAGGGTGGAGCTCTCGGGCCCCAAGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACCTTAGGGAGTCCACATaGCGGGCCGAGGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDLREST*RAEGSE
Trigger: CTCAGAACCCTCGGCCCGCCATGTGGACTCCCTAAG...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTCCGCAGGGACGCCTTaGGGGAGCGTTGGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLSAGTP*GSVGLG
Trigger: CCCTAAGCCAACGCTCCCCCAAGGCGTCCCTGCGGA...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGGTTCTGGCGTCTTGTaGCCCAACACCTCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLGSGVL*PNTSAL
Trigger: GAGGGCCGAGGTGTTGGGCCACAAGACGCCAGAACC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGGTTCTGGCGTCTTGTaGCCCAACACCTCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHGSGVL*PNTSAL
Trigger: GAGGGCCGAGGTGTTGGGCCACAAGACGCCAGAACC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGGTTCTGGCGTCTTGTaGCCCAACACCTCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEGSGVL*PNTSAL
Trigger: GAGGGCCGAGGTGTTGGGCCACAAGACGCCAGAACC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCCGAGGGGCCGGTTCTaGCGTCTTGTGGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLPRGRF*RLVAQH
Trigger: GTGTTGGGCCACAAGACGCCAGAACCGGCCCCTCGG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGGCTCCATCCTCCGGTaGGCTGACTCCTGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHGSILR*ADSWGL
Trigger: CAAACCCCAGGAGTCAGCCCACCGGAGGATGGAGCC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGGCTCCATCCTCCGGTaGGCTGACTCCTGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHGSILR*ADSWGL
Trigger: CAAACCCCAGGAGTCAGCCCACCGGAGGATGGAGCC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGCGCCTCAGCAGGCTTaGGCATCTGGATCTCCACCC +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHAPQQA*ASGSPP
Trigger: GGGTGGAGATCCAGATGCCCAAGCCTGCTGAGGCGC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGCGCCTCAGCAGGCTTaGGCATCTGGATCTCCACCC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEAPQQA*ASGSPP
Trigger: GGGTGGAGATCCAGATGCCCAAGCCTGCTGAGGCGC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGCCTCAGTGGCCTCCTaGCTCCGGGGTGTAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLASVAS*LRGVAS
Trigger: TGAGGCTACACCCCGGAGCCAGGAGGCCACTGAGGC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATTGGGAGCCGCCTCAGTaGCCTCCTGGCTCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDWEPPQ*PPGSGV
Trigger: CACCCCGGAGCCAGGAGGCCACTGAGGCGGCTCCCA...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTGTCGCCAACGCAGCTaGGAGCCGCCTCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLCRQRS*EPPQWP
Trigger: AGGCCACTGAGGCGGCTCCCAGCTGCGTTGGCGACA...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591198.5
CDS-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACCGAAGCCCTGCTTCATaGCCTTCCGGCGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDRSPAS*PSGASA
Trigger: AGCAGATGCGCCGGAAGGCCATGAAGCAGGGCTTCG...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTGCGCTCCTCTGAGGTaGGCTGCACCGACTTCCGGC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLCAPLR*AAPTSG
Trigger: GCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCA...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTCCTCCATGCCGTTaGCCATGGCGCTGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHSPPCR*PWRCCP
Trigger: AGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGA...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACCATCTCCGGGGCTTCTaGCTCCTTCTCCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDHLRGF*LLLLHA
Trigger: GGCATGGAGGAGAAGGAGCCAGAAGCCCCGGAGATG...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGGGACGGAAATGACTTaGGGGCAGGATCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLGTEMT*GQDPGG
Trigger: ACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGGGACGGAAATGACTTaGGGGCAGGATCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITGTEMT*GQDPGG
Trigger: ACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCC...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGGGACGGAAATGACTTaGGGGCAGGATCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHGTEMT*GQDPGG
Trigger: ACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGAGCGTGCAGCCCACTaGGCTCCTCTGCAAGTGCGA +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHERAAH*APLQVR
Trigger: TCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGGCTGCATTCTCCCCTaGGCTCTGACACACTCCAGG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSGCILP*ALTHSR
Trigger: CCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATTGGCTGGGCAGTCGGTaGCAGGGGACCCTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHWLGSR*QGTLEF
Trigger: AAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCA...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTGGCTGGGCAGTCGGTaGCAGGGGACCCTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHWLGSR*QGTLEF
Trigger: AAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCA...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGGCGTGAGAGGGGGATaGCAGGGAGATGAAGACGCC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITGVRGG*QGDEDA
Trigger: GGCGTCTTCATCTCCCTGCCATCCCCCTCTCACGCC...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGGCGTGAGAGGGGGATaGCAGGGAGATGAAGACGCC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHGVRGG*QGDEDA
Trigger: GGCGTCTTCATCTCCCTGCCATCCCCCTCTCACGCC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCCTTCCTCTCTTGGGTaGGGAGGGAGTCAGACGCCC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEPSSLG*GGSQTP
Trigger: GGGCGTCTGACTCCCTCCCCACCCAAGAGAGGAAGG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCCTTCCTCTCTTGGGTaGGGAGGGAGTCAGACGCCC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHPSSLG*GGSQTP
Trigger: GGGCGTCTGACTCCCTCCCCACCCAAGAGAGGAAGG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCACATGGCCTGGGCCCTaGCGCTGGCCACTCATTTCC +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLTWPGP*RWPLIS
Trigger: GGAAATGAGTGGCCAGCGCCAGGGCCCAGGCCATGT...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGACATGGCCTGGGCCCTaGCGCTGGCCACTCATTTCC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSETWPGP*RWPLIS
Trigger: GGAAATGAGTGGCCAGCGCCAGGGCCCAGGCCATGT...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGAAGCATCTCAAGGCTaGGATGCTGCTGCCCACCCC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSEASQG*DAAAHP
Trigger: GGGGTGGGCAGCAGCATCCCAGCCTTGAGATGCTTC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGCTCAGCTGAATGAATaGGGGAGGAAGGCGGGCGCC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITAQLNE*GRKAGA
Trigger: GGCGCCCGCCTTCCTCCCCCATTCATTCAGCTGAGC...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000423034.6
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATTGTCGCCAACGCAGCTaGGAGCCGCCTCAGTGGCTT +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHCRQRS*EPPQWL
Trigger: AAGCCACTGAGGCGGCTCCCAGCTGCGTTGGCGACA...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACCGCGTGCCTCCCACCTaGACAGAGACTGAAGCCACA +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDRVPPT*TETEAT
Trigger: TGTGGCTTCAGTCTCTGTCCAGGTGGGAGGCACGCG...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431235.6
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTGGGAGCCGCCTCAGTaGCCTGAGCTCTTCCTCCGA +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHWEPPQ*PELFLR
Trigger: TCGGAGGAAGAGCTCAGGCCACTGAGGCGGCTCCCA...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000541152.6
CDS-3UTR CCA 90 bp TTGGGGGAGCGTTGGCTTAGGGAGTCCACATGGCGGGCCGAGGGTTCTGAGTTCGCTCCCAGGAAAGTGTaGCGGCGAGGCAGCGGGGCG +
Preference number: 4 (lower is better)
Translates to: LGERWLRESTWRAEGSEFAPRKV*RRGSGA
Trigger: CGCCCCGCTGCCTCGCCGCCACACTTTCCTGGGAGC...GAACTCAGAACCCTCGGCCCGCCATGTGGACTCCCTAAGCCAACGCTCCCCCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTGTCGCCAACGCAGCTaGGAGCCGCCTCAGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLCRQRS*EPPQWL
Trigger: CAGCCACTGAGGCGGCTCCCAGCTGCGTTGGCGACA...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000585930.5
ENST00000592951.5
CDS-3UTR TCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCCCAGGCCAGCGTGCTaGGAAAAGGTTCCGGAGCAC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLPRPAC*EKVPEH
Trigger: GTGCTCCGGAACCTTTTCTCAGCACGCTGGCCTGGG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS-3UTR TCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCATCCTCCGGTGGGCTaGCTCCTGGGGTTTGACGAT +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHHPPVG*LLGFDD
Trigger: ATCGTCAAACCCCAGGAGTCAGCCCACCGGAGGATG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR TCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCCACAGGGGCAGGCTCTaGATTCTCCAAGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLHRGRL*ILQGLG
Trigger: GCCCAGACCTTGGAGAATTCAGAGCCTGCCCCTGTG...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR TCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCACAGGGGCAGGCTCTaGATTCTCCAAGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITHRGRL*ILQGLG
Trigger: GCCCAGACCTTGGAGAATTCAGAGCCTGCCCCTGTG...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR TCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACATGCAGGCGCCTGCTTaGGCCCGGCATCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHMQAPA*ARHLWG
Trigger: CCCCCAGAGATGCCGGGCTCAAGCAGGCGCCTGCAT...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR TCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGCCTTCTCGTTCCGTaGTGCAGGCGCCTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLGLLVP*CRRLLE
Trigger: CTCAAGCAGGCGCCTGCATCACGGAACGAGAAGGCC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTCGATGTCCAGGGGCCTaGGGGAGTGGCCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGRCPGA*GSGRWR
Trigger: CCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCG...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACGGATCCTCTTGCCGTTaGCCTGGTACTCGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANGSSCR*PGTRGH
Trigger: GTGACCACGAGTACCAGGTCAACGGCAAGAGGATCC...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACGGATCCTCTTGCCGTTaGCCTGGTACTCGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDGSSCR*PGTRGH
Trigger: GTGACCACGAGTACCAGGTCAACGGCAAGAGGATCC...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCCCCACACAGACGGATaGTCTGCACACCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHPHTDG*SAHRSC
Trigger: GCAGCTTCGGTGTGCAGATCATCCGTCTGTGTGGGG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCCCCACACAGACGGATaGTCTGCACACCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEPHTDG*SAHRSC
Trigger: GCAGCTTCGGTGTGCAGATCATCCGTCTGTGTGGGG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCCCCACACAGACGGATaGTCTGCACACCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITPHTDG*SAHRSC
Trigger: GCAGCTTCGGTGTGCAGATCATCCGTCTGTGTGGGG...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCAAGGCCTCCGGCACTaGGAACCCCACACAGACGGA +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLQGLRH*EPHTDG
Trigger: TCCGTCTGTGTGGGGTTCTCAGTGCCGGAGGCCTTG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTTCTCCCCTGGGCTCTaGCACACTCCAGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLFSPGL*HTPGDR
Trigger: CCTGTCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAA...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGGGATGGCAGGGAGATaGAGACGCCTCCCTCATTCC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITGMAGR*RRLPHS
Trigger: GGAATGAGGGAGGCGTCTTCATCTCCCTGCCATCCC...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGGGATGGCAGGGAGATaGAGACGCCTCCCTCATTCC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEGMAGR*RRLPHS
Trigger: GGAATGAGGGAGGCGTCTTCATCTCCCTGCCATCCC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATCAGCTCACGCCACTCTaGCCAGCCCAAGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDQLTPL*PAQATA
Trigger: GGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCTG...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTTGGACTGTGCACCCCTaGCGCCCGTTCTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITWTVHP*RPFSPF
Trigger: GAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCA...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTGGACTGTGCACCCCTaGCGCCCGTTCTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHWTVHP*RPFSPF
Trigger: GAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCA...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACGGTGATGTGTGCACCTaGGTGGAGTCTCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANGDVCT*VESHQA
Trigger: GGCCTGATGAGACTCCACTCAGGTGCACACATCACC...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGGTGATGTGTGCACCTaGGTGGAGTCTCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSGDVCT*VESHQA
Trigger: GGCCTGATGAGACTCCACTCAGGTGCACACATCACC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACGGTGATGTGTGCACCTaGGTGGAGTCTCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDGDVCT*VESHQA
Trigger: GGCCTGATGAGACTCCACTCAGGTGCACACATCACC...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGCCCCCTGGCTCAGCTaGATGAATGGGGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLAPWLS*MNGGGR
Trigger: CCTTCCTCCCCCATTCATTCAGCTGAGCCAGGGGGC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000423034.6
CDS-3UTR TCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTCCGCGGGGTCCGACATaGTGGCTGGTGGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGPRGPT*WLVGSG
Trigger: CCCGCTGCCCACCAGCCATCATGTCGGACCCCGCGG...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423034.6
CDS-3UTR GCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCAGGTTCCGGAGCACCTaGCCAGGAGGAACCCTGAGA +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLRFRST*PGGTLR
Trigger: TCTCAGGGTTCCTCCTGGGCAGGTGCTCCGGAACCT...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS-3UTR GCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGCAGACCACCGGGTCTaGCTGCGAGAGTCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLADHRV*LRESQS
Trigger: ACTCTGGGACTCTCGCAGGCAGACCCGGTGGTCTGC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS-3UTR GCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATCACCCTCTTGGGGGCTaGGTCGGTGGCAGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDHPLGG*VGGRGS
Trigger: ACTGCCCCTGCCACCGACGCAGCCCCCAAGAGGGTG...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR GCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCGTGATGCAGGCGCCTaGTTGAGCCCGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLRDAGA*LSPASL
Trigger: CAGAGATGCCGGGCTCAAGCAGGCGCCTGCATCACG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACGCCTTCCGGCGCATCTaGTCCAGGATGGAGTCAATC +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDAFRRI*SRMESI
Trigger: GATTGACTCCATCCTGGAGCAGATGCGCCGGAAGGC...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCATTGAACTCGAAGCCCTaGTTCATGGCCTTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSLNSKP*FMAFRR
Trigger: GCGCCGGAAGGCCATGAAGCAGGGCTTCGAGTTCAA...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTTGAACTCGAAGCCCTaGTTCATGGCCTTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDLNSKP*FMAFRR
Trigger: GCGCCGGAAGGCCATGAAGCAGGGCTTCGAGTTCAA...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACTCCTCTGAGGTGGGCTaGACCGACTTCCGGCTGATT +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANSSEVG*TDFRLI
Trigger: AATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGA...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCCTCTGAGGTGGGCTaGACCGACTTCCGGCTGATT +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDSSEVG*TDFRLI
Trigger: AATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGA...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCATCCTCTGAGGTGGGCTaGACCGACTTCCGGCTGATT +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSSSEVG*TDFRLI
Trigger: AATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGA...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGGGGGTACACGTCGATaGCGTTGGACAGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLGGTRR*RWTAGL
Trigger: CAGACCTGCTGTCCAACGGCATCGACGTGTACCCCC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGGGGGTACACGTCGATaGCGTTGGACAGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHGGTRR*RWTAGL
Trigger: CAGACCTGCTGTCCAACGGCATCGACGTGTACCCCC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGGGGGTACACGTCGATaGCGTTGGACAGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHGGTRR*RWTAGL
Trigger: CAGACCTGCTGTCCAACGGCATCGACGTGTACCCCC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGGGGGTACACGTCGATaGCGTTGGACAGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITGGTRR*RWTAGL
Trigger: CAGACCTGCTGTCCAACGGCATCGACGTGTACCCCC...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTGCCTGTGGCTCCAGTaGAGCCTCCCCACAACCTCG +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLCLWLQ*SLPTTS
Trigger: CGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCA...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTGCACACCGAAGCTaGTCTTCTGAGCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHSAHRS*SSEPSG
Trigger: CCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGA...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATTCTGCACACCGAAGCTaGTCTTCTGAGCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHSAHRS*SSEPSG
Trigger: CCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGA...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTTCTGCACACCGAAGCTaGTCTTCTGAGCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITSAHRS*SSEPSG
Trigger: CCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGA...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGTCTGCACACCGAAGCTaGTCTTCTGAGCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSESAHRS*SSEPSG
Trigger: CCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGA...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGCGCATCAGCAGCACCTaGAGCCCGGTGGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGRISST*SPVGAG
Trigger: CCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCG...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCATTCAGCTGTGGACTGTaGACCCCTGACGCCCGTTCT +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSFSCGL*TPDARS
Trigger: AGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAA...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCATGGTCATCTGTGCCCTaGAAAGACAGCCCCCATGGG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSWSSVP*KDSPHG
Trigger: CCCATGGGGGCTGTCTTTGCAGGGCACAGATGACCA...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGAGTCAGACGCCCAGTaGCCCAACTTCCATGCACAC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSESDAQ*PNFHAH
Trigger: GTGTGCATGGAAGTTGGGGCACTGGGCGTCTGACTC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACGAGTCAGACGCCCAGTaGCCCAACTTCCATGCACAC +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANESDAQ*PNFHAH
Trigger: GTGTGCATGGAAGTTGGGGCACTGGGCGTCTGACTC...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCATCTCAAGGCTGGGATaGTGCTGCCCACCCCCACCC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLISRLG*CCPPPP
Trigger: GGGTGGGGGTGGGCAGCAGCATCCCAGCCTTGAGAT...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGACTGCTGCTGGCTGCTaGTGGCCAGAAGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSETAAGC*WPEGSP
Trigger: AGGAGAGCCTTCTGGCCAGCAGCAGCCAGCAGCAGT...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427674.6
CDS-3UTR GCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCTTTCTGGCCCTCCGTaGCCCCTAACCCAGCACTTC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITLSGPP*PLTQHF
Trigger: GAAGTGCTGGGTTAGGGGGCACGGAGGGCCAGAAAG...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000431235.6
ENST00000449803.6
CDS-3UTR GCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACGGGAGGGACCTCGACTaGCTGGGAAGGGAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHGRDLD*LGREAR
Trigger: CCGAGCCTCCCTTCCCAGGCAGTCGAGGTCCCTCCC...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATAGAGAGGGCCCGAAGTaGGCCCCGAGGAGTCCGGCA +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDREGPK*APRSPA
Trigger: TGCCGGACTCCTCGGGGCCCACTTCGGGCCCTCTCT...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCTTAGGGAGTCCACATaGCGGGCCGAGGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHLREST*RAEGSE
Trigger: CTCAGAACCCTCGGCCCGCCATGTGGACTCCCTAAG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCATGGACGAGATGTCAATaGACAGCTCAGTGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSWTRCQ*TAQCAG
Trigger: CCCGGCGCACTGAGCTGTCCATTGACATCTCGTCCA...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTGGACGAGATGTCAATaGACAGCTCAGTGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDWTRCQ*TAQCAG
Trigger: CCCGGCGCACTGAGCTGTCCATTGACATCTCGTCCA...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGTTCTGGCGTCTTGTaGCCCAACACCTCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLGSGVL*PNTSAL
Trigger: GAGGGCCGAGGTGTTGGGCCACAAGACGCCAGAACC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGCACCTCGGGGACCTTaGAGGCAGGGGGCTCCATCC +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDAPRGP*RQGAPS
Trigger: GGATGGAGCCCCCTGCCTCCAAGGTCCCCGAGGTGC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGCAGGCTTGGGCATCTaGATCTCCACCCTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLAGLGI*ISTLLG
Trigger: CCCCAAGAGGGTGGAGATCCAGATGCCCAAGCCTGC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGCAGGCTTGGGCATCTaGATCTCCACCCTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHAGLGI*ISTLLG
Trigger: CCCCAAGAGGGTGGAGATCCAGATGCCCAAGCCTGC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCCGAAGCCCTGCTTCATaGCCTTCCGGCGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLRSPAS*PSGASA
Trigger: AGCAGATGCGCCGGAAGGCCATGAAGCAGGGCTTCG...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCGAAGCCCTGCTTCATaGCCTTCCGGCGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHRSPAS*PSGASA
Trigger: AGCAGATGCGCCGGAAGGCCATGAAGCAGGGCTTCG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCGAAGCCCTGCTTCATaGCCTTCCGGCGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHRSPAS*PSGASA
Trigger: AGCAGATGCGCCGGAAGGCCATGAAGCAGGGCTTCG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCGAAGCCCTGCTTCATaGCCTTCCGGCGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSERSPAS*PSGASA
Trigger: AGCAGATGCGCCGGAAGGCCATGAAGCAGGGCTTCG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATAGGGGCCTGAGGGAGTaGCCGGTGGCGGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDRGLRE*PVAGMK
Trigger: CTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCT...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACAGGGGCCTGAGGGAGTaGCCGGTGGCGGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHRGLRE*PVAGMK
Trigger: CTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCT...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCTTGCCGTTGACCTaGTACTCGTGGTCACTGCCC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSLLPLT*YSWSLP
Trigger: GGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAG...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACGGTACGCCTCGAAGTaGATGCTGCTGGTGATGTCC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSRYASK*MLLVMS
Trigger: GGACATCACCAGCAGCATCCACTTCGAGGCGTACCG...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCGGTACGCCTCGAAGTaGATGCTGCTGGTGATGTCC +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANRYASK*MLLVMS
Trigger: GGACATCACCAGCAGCATCCACTTCGAGGCGTACCG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTCTCCTCCATGCCGTTaGCCATGGCGCTGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLSPPCR*PWRCCP
Trigger: AGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGA...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCATCTCCGGGGCTTCTaGCTCCTTCTCCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHHLRGF*LLLLHA
Trigger: GGCATGGAGGAGAAGGAGCCAGAAGCCCCGGAGATG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCATCTCCGGGGCTTCTaGCTCCTTCTCCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHHLRGF*LLLLHA
Trigger: GGCATGGAGGAGAAGGAGCCAGAAGCCCCGGAGATG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGAGCGTGCAGCCCACTaGGCTCCTCTGCAAGTGCGA +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLERAAH*APLQVR
Trigger: TCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGGCTGCATTCTCCCCTaGGCTCTGACACACTCCAGG +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHGCILP*ALTHSR
Trigger: CCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGGCTGCATTCTCCCCTaGGCTCTGACACACTCCAGG +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHGCILP*ALTHSR
Trigger: CCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGGGGCTTGGAGTGGCTaGGCAGTCGGTGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDGAWSG*AVGGRG
Trigger: TCCCCTGCCACCGACTGCCCAGCCACTCCAAGCCCC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACACACACACACTTCCCTaGTCACTTGGGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDTHTLP*SLGQGR
Trigger: CCTGCCCTGCCCAAGTGACCAGGGAAGTGTGTGTGT...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCACATGGCCTGGGCCCTaGCGCTGGCCACTCATTTCC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLTWPGP*RWPLIS
Trigger: GGAAATGAGTGGCCAGCGCCAGGGCCCAGGCCATGT...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGAAGCATCTCAAGGCTaGGATGCTGCTGCCCACCCC +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHEASQG*DAAAHP
Trigger: GGGGTGGGCAGCAGCATCCCAGCCTTGAGATGCTTC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGAAGCATCTCAAGGCTaGGATGCTGCTGCCCACCCC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHEASQG*DAAAHP
Trigger: GGGGTGGGCAGCAGCATCCCAGCCTTGAGATGCTTC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGAAGCATCTCAAGGCTaGGATGCTGCTGCCCACCCC +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLEASQG*DAAAHP
Trigger: GGGGTGGGCAGCAGCATCCCAGCCTTGAGATGCTTC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGTCCGACATGATGGCTaGTGGGCAGCGGGTCGCGCG +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDVRHDG*WAAGRA
Trigger: CGCGCGACCCGCTGCCCACCAGCCATCATGTCGGAC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423034.6
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAAGTAAGACTTCTTCATaGTGCCTCCGTGGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSSKTSS*CLRGRR
Trigger: GCGGCGGCCACGGAGGCACCATGAAGAAGTCTTACT...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427177.6
ENST00000591198.5
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTTCAAGGCTGGGCCACTaGAGTCACCAAGCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITSRLGH*SHQASG
Trigger: TCCGGAGGCTTGGTGACTCCAGTGGCCCAGCCTTGA...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427177.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAACACTCAGGGCAGAGTaGCCATCCAGGGTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSTLRAE*PSRVPL
Trigger: GAGAGGAACCCTGGATGGCCACTCTGCCCTGAGTGT...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTAACCCAGCACTTCTaGGGACCCACACACTCAGGG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSLTQHF*GPTHSG
Trigger: CCCTGAGTGTGTGGGTCCCCAGAAGTGCTGGGTTAG...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCCAAAGGGGACTTTCTaGCCCTCCGTGCCCCCTAAC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITPKGTF*PSVPPN
Trigger: GTTAGGGGGCACGGAGGGCCAGAAAGTCCCCTTTGG...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAAGGGAGGCTCGGTaGGGAATTGCTCCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLGREAR*GIAPRG
Trigger: CCCCCTTGGAGCAATTCCCCACCGAGCCTCCCTTCC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591088.5
CDS-3UTR CCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACGGGACCTCGACTGCCTaGGAAGGGAGGCTCGGTGGG +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHGTSTA*EGRLGG
Trigger: CCCACCGAGCCTCCCTTCCCAGGCAGTCGAGGTCCC...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACTGTCGCCAACGCAGCTaGGAGCCGCCTCAGTGGCCC +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHCRQRS*EPPQWP
Trigger: GGGCCACTGAGGCGGCTCCCAGCTGCGTTGGCGACA...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTGGGAGCCTCCAGGGTaGTCAGCCTCCAGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLWEPPG*SASRSS
Trigger: GGAAGACCTGGAGGCTGACCACCCTGGAGGCTCCCA...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592951.5
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCTCTTCCCCAAAGAGTaGCTGTGGGACGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHLFPKE*LWDAGS
Trigger: GCTCCCAGCGTCCCACAGCCACTCTTTGGGGAAGAG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592951.5
CDS-3UTR TCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCACAGGGGCAGGCTCTaGATTCTCCAAGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLHRGRL*ILQGLG
Trigger: GCCCAGACCTTGGAGAATTCAGAGCCTGCCCCTGTG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR TCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGGGGATGCGCTCCTCTaGGGTGGGCTGCACCGACTT +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDGDALL*GGLHRL
Trigger: AAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACGGGGATGCGCTCCTCTaGGGTGGGCTGCACCGACTT +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHGDALL*GGLHRL
Trigger: AAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCC...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR TCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACAGCAGTTCTCGTTGTTaGTGTGGTCCCCGAACCCTG +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDSSSRC*CGPRTL
Trigger: CAGGGTTCGGGGACCACATCAACAACGAGAACTGCT...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAAGCAGTTCTCGTTGTTaGTGTGGTCCCCGAACCCTG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSSSSRC*CGPRTL
Trigger: CAGGGTTCGGGGACCACATCAACAACGAGAACTGCT...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACCCCTCTCCTCCAGGGTaGGTGTGTCCGCCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHPSPPG*VCPPWR
Trigger: TCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGG...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR TCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGGATCCTCTTGCCGTTaGCCTGGTACTCGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHGSSCR*PGTRGH
Trigger: GTGACCACGAGTACCAGGTCAACGGCAAGAGGATCC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGGATCCTCTTGCCGTTaGCCTGGTACTCGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHGSSCR*PGTRGH
Trigger: GTGACCACGAGTACCAGGTCAACGGCAAGAGGATCC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGGATCCTCTTGCCGTTaGCCTGGTACTCGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITGSSCR*PGTRGH
Trigger: GTGACCACGAGTACCAGGTCAACGGCAAGAGGATCC...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATCGCTGCTGCCCTCGTTaGGGCGCTTCACACGGTACG +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDRCCPR*GASHGT
Trigger: CGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCG...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGGATGGCAGGGAGATaGAGACGCCTCCCTCATTCC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLGMAGR*RRLPHS
Trigger: GGAATGAGGGAGGCGTCTTCATCTCCCTGCCATCCC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGGTGATGTGTGCACCTaGGTGGAGTCTCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITGDVCT*VESHQA
Trigger: GGCCTGATGAGACTCCACTCAGGTGCACACATCACC...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGGTGATGTGTGCACCTaGGTGGAGTCTCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHGDVCT*VESHQA
Trigger: GGCCTGATGAGACTCCACTCAGGTGCACACATCACC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCTTCGAAGTCCGAAATaGTCCCATCCAGCTGCGCGT +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANLRSPK*SHPAAR
Trigger: ACGCGCAGCTGGATGGGATCATTTCGGACTTCGAAG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000423034.6
CDS-3UTR TCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGCCTTCCCAGAAACTTaGGCCCATGGGGGCACTTCA +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHAFPET*AHGGTS
Trigger: TGAAGTGCCCCCATGGGCTCAAGTTTCTGGGAAGGC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR GCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCGCCGCCCCGAGGCTTaGTGCTCCTTTTTAATATCC +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANRRPEA*CSFLIS
Trigger: GGATATTAAAAAGGAGCAGCAAGCCTCGGGGCGGCG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS-3UTR GCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACCGGCGTTCTCCACCTaGTTGGACGAGATGTCAATG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSPAFST*LDEMSM
Trigger: CATTGACATCTCGTCCAAGCAGGTGGAGAACGCCGG...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR GCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCCGGCGTTCTCCACCTaGTTGGACGAGATGTCAATG +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANPAFST*LDEMSM
Trigger: CATTGACATCTCGTCCAAGCAGGTGGAGAACGCCGG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR GCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGCCTTCCGGCGCATCTaGTCCAGGATGGAGTCAATC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEAFRRI*SRMESI
Trigger: GATTGACTCCATCCTGGAGCAGATGCGCCGGAAGGC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGCCTTCCGGCGCATCTaGTCCAGGATGGAGTCAATC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITAFRRI*SRMESI
Trigger: GATTGACTCCATCCTGGAGCAGATGCGCCGGAAGGC...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATTTGAACTCGAAGCCCTaGTTCATGGCCTTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHLNSKP*FMAFRR
Trigger: GCGCCGGAAGGCCATGAAGCAGGGCTTCGAGTTCAA...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCTTGAACTCGAAGCCCTaGTTCATGGCCTTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLLNSKP*FMAFRR
Trigger: GCGCCGGAAGGCCATGAAGCAGGGCTTCGAGTTCAA...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTTTGAACTCGAAGCCCTaGTTCATGGCCTTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITLNSKP*FMAFRR
Trigger: GCGCCGGAAGGCCATGAAGCAGGGCTTCGAGTTCAA...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGTCCTCTGAGGTGGGCTaGACCGACTTCCGGCTGATT +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSESSEVG*TDFRLI
Trigger: AATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGA...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCTCCTCTGAGGTGGGCTaGACCGACTTCCGGCTGATT +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLSSEVG*TDFRLI
Trigger: AATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGA...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCTCTGAGGTGGGCTaGACCGACTTCCGGCTGATT +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHSSEVG*TDFRLI
Trigger: AATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGA...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTTCCTCTGAGGTGGGCTaGACCGACTTCCGGCTGATT +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITSSEVG*TDFRLI
Trigger: AATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGA...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCATGTCAATTCAGTGGGTaGTCTCACCCCTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSCQFSG*SHPCLW
Trigger: CCACAGGCAGGGGTGAGAGCACCCACTGAATTGACA...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTGTCAATTCAGTGGGTaGTCTCACCCCTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDCQFSG*SHPCLW
Trigger: CCACAGGCAGGGGTGAGAGCACCCACTGAATTGACA...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTCTGCACACCGAAGCTaGTCTTCTGAGCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLSAHRS*SSEPSG
Trigger: CCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGA...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACGATAAAGGCACTTTCTaGTCCAGGAGGGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDDKGTF*SRRGSC
Trigger: GCAGCTGCCCCTCCTGGAGCAGAAAGTGCCTTTATC...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTTCAGCTGTGGACTGTaGACCCCTGACGCCCGTTCT +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHFSCGL*TPDARS
Trigger: AGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAA...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGTTCAGCTGTGGACTGTaGACCCCTGACGCCCGTTCT +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEFSCGL*TPDARS
Trigger: AGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAA...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACGACTTTGGTCATCTGTaGCCTGCAAAGACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDDFGHL*PAKTAP
Trigger: GGGGGCTGTCTTTGCAGGGCACAGATGACCAAAGTC...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGAGTCAGACGCCCAGTaGCCCAACTTCCATGCACAC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHESDAQ*PNFHAH
Trigger: GTGTGCATGGAAGTTGGGGCACTGGGCGTCTGACTC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGAGTCAGACGCCCAGTaGCCCAACTTCCATGCACAC +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLESDAQ*PNFHAH
Trigger: GTGTGCATGGAAGTTGGGGCACTGGGCGTCTGACTC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGACAGAGCCTGCTCTCTaGGTCCAGACAGTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSETEPAL*VQTVSP
Trigger: TGGGGAGACTGTCTGGACGCAGAGAGCAGGCTCTGT...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR GCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATAGCCCTACGGCCACCTaGAGGCCTTCCCAGAAACTT +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHSPTAT*RPSQKL
Trigger: AAGTTTCTGGGAAGGCCTGCAGGTGGCCGTAGGGCT...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR GCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACGGTGGCCAAGCAGAATaGAAGGTCATCCTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDGGQAE*KVILLL
Trigger: CAGGAGGAGGATGACCTTGCATTCTGCTTGGCCACC...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR GCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATAGCGACTTGAGTTCCTaGCAGAGACAGCAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHSDLSS*QRQQAA
Trigger: GGCTGCCTGCTGTCTCTGGCAGGAACTCAAGTCGCT...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431235.6
ENST00000449803.6
CDS-3UTR GCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACAGGACCACGTCCCTGTaGATCCAGCACCAGCCATCA +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHRTTSL*IQHQPS
Trigger: TGATGGCTGGTGCTGGATGCACAGGGACGTGGTCCT...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585930.5
CDS-3UTR GCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACGGCTCGGTGGGGAATTaGTCCAAGGGGGCAGGGCGA +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHGSVGN*SKGAGR
Trigger: TCGCCCTGCCCCCTTGGAGCAATTCCCCACCGAGCC...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCCCCGGCCGCCCGGTCTaGTCGGTGGCTGCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSPGRPV*SVAAEV
Trigger: GACCTCTGCAGCCACCGACCAGACCGGGCGGCCGGG...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATCTGGACCCTCCGGGGTaGGGTGGAGTTGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDLDPPG*GGVGCL
Trigger: GAGACACCCAACTCCACCCCACCCCGGAGGGTCCAG...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACAGGTCCTGGAATTTCTaGGTGGAGCTGGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANRSWNF*VELATV
Trigger: CACTGTGGCCAGCTCCACCCAGAAATTCCAGGACCT...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACAGGTCCTGGAATTTCTaGGTGGAGCTGGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDRSWNF*VELATV
Trigger: CACTGTGGCCAGCTCCACCCAGAAATTCCAGGACCT...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTTCACGCCCAGGTCCTaGAATTTCTGGGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDFTPRS*NFWVEL
Trigger: CAGCTCCACCCAGAAATTCCAGGACCTGGGCGTGAA...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp GACGCCTTGGGGGAGCGTTGGCTTAGGGAGTCCACATGGCGGGCCGAGGGTTCTCTTAGGGAGTCCACATaGCGGGCCGAGGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: DALGERWLRESTWRAEGSLREST*RAEGSE
Trigger: CTCAGAACCCTCGGCCCGCCATGTGGACTCCCTAAG...AGAACCCTCGGCCCGCCATGTGGACTCCCTAAGCCAACGCTCCCCCAAGGCGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTGGACGAGATGTCAATaGACAGCTCAGTGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHWTRCQ*TAQCAG
Trigger: CCCGGCGCACTGAGCTGTCCATTGACATCTCGTCCA...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGTGGACGAGATGTCAATaGACAGCTCAGTGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEWTRCQ*TAQCAG
Trigger: CCCGGCGCACTGAGCTGTCCATTGACATCTCGTCCA...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGACCGGGACGGGCCGATaGCCCCGGCGTTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGTGTGR*PRRSPP
Trigger: AGGTGGAGAACGCCGGGGCCATCGGCCCGTCCCGGT...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCGGTGGGCTGACTCCTaGGGTTTGACGATGGTGATC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHRWADS*GLTMVI
Trigger: GATCACCATCGTCAAACCCCAGGAGTCAGCCCACCG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCGGTGGGCTGACTCCTaGGGTTTGACGATGGTGATC +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHRWADS*GLTMVI
Trigger: GATCACCATCGTCAAACCCCAGGAGTCAGCCCACCG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCGGTGGGCTGACTCCTaGGGTTTGACGATGGTGATC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITRWADS*GLTMVI
Trigger: GATCACCATCGTCAAACCCCAGGAGTCAGCCCACCG...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCCGGTGGGCTGACTCCTaGGGTTTGACGATGGTGATC +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLRWADS*GLTMVI
Trigger: GATCACCATCGTCAAACCCCAGGAGTCAGCCCACCG...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGCGGTGGCAGGGGCAGTaGGCACCTCGGGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGRWQGQ*APRGPW
Trigger: CCAAGGTCCCCGAGGTGCCCACTGCCCCTGCCACCG...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGCAGGCTTGGGCATCTaGATCTCCACCCTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLAGLGI*ISTLLG
Trigger: CCCCAAGAGGGTGGAGATCCAGATGCCCAAGCCTGC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGCCTCAGTGGCCTCCTaGCTCCGGGGTGTAGCCTCA +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDASVAS*LRGVAS
Trigger: TGAGGCTACACCCCGGAGCCAGGAGGCCACTGAGGC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGTGGGAGCCGCCTCAGTaGCCTCCTGGCTCCGGGGTG +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGWEPPQ*PPGSGV
Trigger: CACCCCGGAGCCAGGAGGCCACTGAGGCGGCTCCCA...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACGCATCTGCTCCAGGATaGAGTCAATCCCCACGTAGC +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDASAPG*SQSPRS
Trigger: GCTACGTGGGGATTGACTCCATCCTGGAGCAGATGC...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACGCATCTGCTCCAGGATaGAGTCAATCCCCACGTAGC +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANASAPG*SQSPRS
Trigger: GCTACGTGGGGATTGACTCCATCCTGGAGCAGATGC...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGCATCTGCTCCAGGATaGAGTCAATCCCCACGTAGC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSASAPG*SQSPRS
Trigger: GCTACGTGGGGATTGACTCCATCCTGGAGCAGATGC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCGAAGCCCTGCTTCATaGCCTTCCGGCGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLRSPAS*PSGASA
Trigger: AGCAGATGCGCCGGAAGGCCATGAAGCAGGGCTTCG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATTGCGCTCCTCTGAGGTaGGCTGCACCGACTTCCGGC +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDCAPLR*AAPTSG
Trigger: GCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCA...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACTGCGCTCCTCTGAGGTaGGCTGCACCGACTTCCGGC +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHCAPLR*AAPTSG
Trigger: GCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCA...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACGTGGTCCCCGAACCCTaGTGTGTCAATCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANVVPEP*CVNHCQ
Trigger: CTGACAGTGATTGACACACCAGGGTTCGGGGACCAC...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGTGGTCCCCGAACCCTaGTGTGTCAATCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSVVPEP*CVNHCQ
Trigger: CTGACAGTGATTGACACACCAGGGTTCGGGGACCAC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAATCCGCTGTTTGAAGTaGACCCTCTCCTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSIRCLK*TLSSRV
Trigger: CACCCTGGAGGAGAGGGTCCACTTCAAACAGCGGAT...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCTCTTGCCGTTGACCTaGTACTCGTGGTCACTGCCC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHLLPLT*YSWSLP
Trigger: GGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCTCTTGCCGTTGACCTaGTACTCGTGGTCACTGCCC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITLLPLT*YSWSLP
Trigger: GGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAG...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACCGATGGTACCCCACTTaGTCTTCCTCCCAAGGATCC +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDRWYPT*SSSQGS
Trigger: GGATCCTTGGGAGGAAGACCAAGTGGGGTACCATCG...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACGATGGTACCCCACTTaGTCTTCCTCCCAAGGATCC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSRWYPT*SSSQGS
Trigger: GGATCCTTGGGAGGAAGACCAAGTGGGGTACCATCG...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCGGTACGCCTCGAAGTaGATGCTGCTGGTGATGTCC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITRYASK*MLLVMS
Trigger: GGACATCACCAGCAGCATCCACTTCGAGGCGTACCG...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCGGTACGCCTCGAAGTaGATGCTGCTGGTGATGTCC +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHRYASK*MLLVMS
Trigger: GGACATCACCAGCAGCATCCACTTCGAGGCGTACCG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCGGTACGCCTCGAAGTaGATGCTGCTGGTGATGTCC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSERYASK*MLLVMS
Trigger: GGACATCACCAGCAGCATCCACTTCGAGGCGTACCG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCATCTCCGGGGCTTCTaGCTCCTTCTCCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLHLRGF*LLLLHA
Trigger: GGCATGGAGGAGAAGGAGCCAGAAGCCCCGGAGATG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGCGGGGGTGGGCAGGGTaGCGTCTACATCTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGRGWAG*RLHLRG
Trigger: GCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCG...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACCTTCCCTTGTTTCCTaGCAGCATGTCGAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSPSLVS*QHVEGV
Trigger: CACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGG...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACCCTTCCCTTGTTTCCTaGCAGCATGTCGAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDPSLVS*QHVEGV
Trigger: CACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGG...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGATGGCCACACCATGTaGCGGGCAGGGGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDDGHTM*RAGGPG
Trigger: ACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGGTGGCAGGGGACCCTaGAGTTTTCTACCCTTAGGA +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSGGRGP*SFLPLG
Trigger: TCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTACACACACACTTCCCTaGTCACTTGGGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITTHTLP*SLGQGR
Trigger: CCTGCCCTGCCCAAGTGACCAGGGAAGTGTGTGTGT...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACACACACACACTTCCCTaGTCACTTGGGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHTHTLP*SLGQGR
Trigger: CCTGCCCTGCCCAAGTGACCAGGGAAGTGTGTGTGT...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATACACACACACTTCCCTaGTCACTTGGGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHTHTLP*SLGQGR
Trigger: CCTGCCCTGCCCAAGTGACCAGGGAAGTGTGTGTGT...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACATGTGTGCACCTGAGTaGAGTCTCATCAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANMCAPE*SLIRPL
Trigger: GAGGGGCCTGATGAGACTCCACTCAGGTGCACACAT...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAATGTGTGCACCTGAGTaGAGTCTCATCAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSMCAPE*SLIRPL
Trigger: GAGGGGCCTGATGAGACTCCACTCAGGTGCACACAT...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGAGTAAGACTTCTTCATaGTGCCTCCGTGGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSESKTSS*CLRGRR
Trigger: GCGGCGGCCACGGAGGCACCATGAAGAAGTCTTACT...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427177.6
ENST00000591198.5
CDS-3UTR CCA 90 bp CCGAGAGCTCCACCCTCCGCAGGGACGCCTTGGGGGAGCGTTGGCTTAGGGAGTAGTAAGACTTCTTCATaGTGCCTCCGTGGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PRAPPSAGTPWGSVGLGSSKTSS*CLRGRR
Trigger: GCGGCGGCCACGGAGGCACCATGAAGAAGTCTTACT...ACTCCCTAAGCCAACGCTCCCCCAAGGCGTCCCTGCGGAGGGTGGAGCTCTCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGTCCGGAGCCGGCCACTaGAGGTCCGCGTGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGSGAGH*RSACLL
Trigger: CAGGAGGCACGCGGACCTCCAGTGGCCGGCTCCGGA...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427177.6
ENST00000449803.6
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCATCCCTGCTGAATCCTaGGGAAGCCCTGCCTCGCAA +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLIPAES*GSPASQ
Trigger: TTGCGAGGCAGGGCTTCCCCAGGATTCAGCAGGGAT...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCCGTAACAATGCACACTaGAGCAGCCTCCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLRNNAH*SSLQLP
Trigger: GGGCAGCTGGAGGCTGCTCCAGTGTGCATTGTTACG...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGCCGGCATCTACAGCTaGTGCCCTTGCCCCGGCGAA +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDAGIYS*CPCPGE
Trigger: TTCGCCGGGGCAAGGGCACCAGCTGTAGATGCCGGC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCCTAACCCAGCACTTCTaGGGACCCACACACTCAGGG +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLLTQHF*GPTHSG
Trigger: CCCTGAGTGTGTGGGTCCCCAGAAGTGCTGGGTTAG...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGTCCGCGTGCCTCCTaGACAGAGACTGAAGCCACA +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLGPRAS*TETEAT
Trigger: TGTGGCTTCAGTCTCTGTCCAGGAGGCACGCGGACC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449803.6
CDS-3UTR CCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACGCCCACCGGGTCACATaGCTCAGAGCCGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHAHRVT*LRAEQR
Trigger: CCTCTGCTCGGCTCTGAGCCATGTGACCCGGTGGGC...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR TCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACGGCCTTCTCGTTCCGTaGTGCAGGCGCCTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHGLLVP*CRRLLE
Trigger: CTCAAGCAGGCGCCTGCATCACGGAACGAGAAGGCC...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR TCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGAGCAGTTCTCGTTGTTaGTGTGGTCCCCGAACCCTG +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSESSSRC*CGPRTL
Trigger: CAGGGTTCGGGGACCACATCAACAACGAGAACTGCT...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATAGCAGTTCTCGTTGTTaGTGTGGTCCCCGAACCCTG +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHSSSRC*CGPRTL
Trigger: CAGGGTTCGGGGACCACATCAACAACGAGAACTGCT...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACAGCAGTTCTCGTTGTTaGTGTGGTCCCCGAACCCTG +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHSSSRC*CGPRTL
Trigger: CAGGGTTCGGGGACCACATCAACAACGAGAACTGCT...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGATCCTCTTGCCGTTaGCCTGGTACTCGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLGSSCR*PGTRGH
Trigger: GTGACCACGAGTACCAGGTCAACGGCAAGAGGATCC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATTTCTCCCCTGGGCTCTaGCACACTCCAGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDFSPGL*HTPGDR
Trigger: CCTGTCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAA...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACAGTCTGCGGATGGCTaGGATAAAGGCACTTTCTGC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSQSADG*DKGTFC
Trigger: GCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTG...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACCAGTCTGCGGATGGCTaGGATAAAGGCACTTTCTGC +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDQSADG*DKGTFC
Trigger: GCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTG...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGCAGCTCACGCCACTCTaGCCAGCCCAAGCCACGGCC +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGQLTPL*PAQATA
Trigger: GGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCTG...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTCGTTACCATGGGCTCTaGGGGGAGGGGCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGRYHGL*GEGPRH
Trigger: GTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACG...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGTGATGTGTGCACCTaGGTGGAGTCTCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLGDVCT*VESHQA
Trigger: GGCCTGATGAGACTCCACTCAGGTGCACACATCACC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATTACACTCCTTCTCGCTaGCCTTCTCCTGGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHYTPSR*PSPGCK
Trigger: CTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTA...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTTACACTCCTTCTCGCTaGCCTTCTCCTGGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITYTPSR*PSPGCK
Trigger: CTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTA...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTACACTCCTTCTCGCTaGCCTTCTCCTGGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHYTPSR*PSPGCK
Trigger: CTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTA...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATCACCAGTGGGGGTGGTaGGGGGTCCTTCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDHQWGW*GVLPLL
Trigger: CAAGAGAGGAAGGACCCCTCACCACCCCCACTGGTG...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGGTCCGCGTGCCTCCTaGGTAAGACTTCTTCATGGT +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITGPRAS*VRLLHG
Trigger: ACCATGAAGAAGTCTTACTCAGGAGGCACGCGGACC...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427177.6
CDS-3UTR TCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATAGACACAAAGGCCACTaGAGGCCCCGGGCCAACACC +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDRHKGH*RPRANT
Trigger: GGTGTTGGCCCGGGGCCTTCAGTGGCCTTTGTGTCT...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431235.6
ENST00000449803.6
CDS-3UTR TCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCCCATTGAGAAAAGATaGCACTCCTGCCTGGACCCC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITPIEKR*HSCLDP
Trigger: GGGGTCCAGGCAGGAGTGTCATCTTTTCTCAATGGG...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000431235.6
ENST00000449803.6
CDS-3UTR TCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCACCTGGACAGAGACTaGAGCCACATCCCCATTGAG +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEHLDRD*SHIPIE
Trigger: CTCAATGGGGATGTGGCTTCAGTCTCTGTCCAGGTG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000431235.6
CDS-3UTR TCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACGCTTACCCTGGCCATTaGCCCTACTCTCAAGCATTG +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDAYPGH*PYSQAL
Trigger: CAATGCTTGAGAGTAGGGTCAATGGCCAGGGTAAGC...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592951.5
CDS-3UTR GCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCAAAAAGCCCAGTTCCTaGGTGCCTGCCTCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLKKPSS*VPASPS
Trigger: GGAAGGCGAGGCAGGCACGCAGGAACTGGGCTTTTT...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS-3UTR GCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCCGGCGTTCTCCACCTaGTTGGACGAGATGTCAATG +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITPAFST*LDEMSM
Trigger: CATTGACATCTCGTCCAAGCAGGTGGAGAACGCCGG...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR GCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCCGGCGTTCTCCACCTaGTTGGACGAGATGTCAATG +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHPAFST*LDEMSM
Trigger: CATTGACATCTCGTCCAAGCAGGTGGAGAACGCCGG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR GCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCCGGCGTTCTCCACCTaGTTGGACGAGATGTCAATG +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHPAFST*LDEMSM
Trigger: CATTGACATCTCGTCCAAGCAGGTGGAGAACGCCGG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR GCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACCGTGATGCAGGCGCCTaGTTGAGCCCGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHRDAGA*LSPASL
Trigger: CAGAGATGCCGGGCTCAAGCAGGCGCCTGCATCACG...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR GCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGCCTTCCGGCGCATCTaGTCCAGGATGGAGTCAATC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLAFRRI*SRMESI
Trigger: GATTGACTCCATCCTGGAGCAGATGCGCCGGAAGGC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTTGAACTCGAAGCCCTaGTTCATGGCCTTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLLNSKP*FMAFRR
Trigger: GCGCCGGAAGGCCATGAAGCAGGGCTTCGAGTTCAA...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTCCTCTGAGGTGGGCTaGACCGACTTCCGGCTGATT +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLSSEVG*TDFRLI
Trigger: AATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGA...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACGTTGGACAGCAGGTCTaGGGTGATCCGCTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDVGQQV*GDPLFE
Trigger: TTCAAACAGCGGATCACCGCAGACCTGCTGTCCAAC...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATTGCCTGTGGCTCCAGTaGAGCCTCCCCACAACCTCG +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDCLWLQ*SLPTTS
Trigger: CGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCA...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTTGTCAATTCAGTGGGTaGTCTCACCCCTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITCQFSG*SHPCLW
Trigger: CCACAGGCAGGGGTGAGAGCACCCACTGAATTGACA...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTGTCAATTCAGTGGGTaGTCTCACCCCTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHCQFSG*SHPCLW
Trigger: CCACAGGCAGGGGTGAGAGCACCCACTGAATTGACA...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGTGTCAATTCAGTGGGTaGTCTCACCCCTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSECQFSG*SHPCLW
Trigger: CCACAGGCAGGGGTGAGAGCACCCACTGAATTGACA...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACACAGACGGATGATCTaGACACCGAAGCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSHRRMI*TPKLLF
Trigger: GAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTG...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGATAAAGGCACTTTCTaGTCCAGGAGGGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLDKGTF*SRRGSC
Trigger: GCAGCTGCCCCTCCTGGAGCAGAAAGTGCCTTTATC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACGCTGCCACGAAACCTTaGTCTTCAGCTGTGGACTGT +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANAATKP*SSAVDC
Trigger: ACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGC...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGACTTTGGTCATCTGTaGCCTGCAAAGACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEDFGHL*PAKTAP
Trigger: GGGGGCTGTCTTTGCAGGGCACAGATGACCAAAGTC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGACTTTGGTCATCTGTaGCCTGCAAAGACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLDFGHL*PAKTAP
Trigger: GGGGGCTGTCTTTGCAGGGCACAGATGACCAAAGTC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATATCTCAAGGCTGGGATaGTGCTGCCCACCCCCACCC +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDISRLG*CCPPPP
Trigger: GGGTGGGGGTGGGCAGCAGCATCCCAGCCTTGAGAT...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACATCTCCCTGGGTGCCTaGAAAGTCCTTCAGATCCCT +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDISLGA*KVLQIP
Trigger: AGGGATCTGAAGGACTTTGCAGGCACCCAGGGAGAT...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR GCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCTGTCCAGGAGAAAGCTaGCGGCATCTACAGCTGGTG +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLCPGES*RHLQLV
Trigger: CACCAGCTGTAGATGCCGGCAGCTTTCTCCTGGACA...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR GCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGCCACGGCGCTGCTCCTaGGCCCATTCCCAGCCACTC +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGPRRCS*AHSQPL
Trigger: GAGTGGCTGGGAATGGGCGCAGGAGCAGCGCCGTGG...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427674.6
CDS-3UTR CCA 90 bp GTTGGCTTAGGGAGTCCACATGGCGGGCCGAGGGTTCTGAGTTCTTCACGCCCACCCTCCGGGGTGGGGTaGAGTTGGGTGTCTCGACCT +
Preference number: 4 (lower is better)
Translates to: VGLGSPHGGPRVLSSSRPPSGVG*SWVSRP
Trigger: AGGTCGAGACACCCAACTCCACCCCACCCCGGAGGG...TGGGCGTGAAGAACTCAGAACCCTCGGCCCGCCATGTGGACTCCCTAAGCCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCAGGTCCTGGAATTTCTaGGTGGAGCTGGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLRSWNF*VELATV
Trigger: CACTGTGGCCAGCTCCACCCAGAAATTCCAGGACCT...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACAGGTCCTGGAATTTCTaGGTGGAGCTGGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHRSWNF*VELATV
Trigger: CACTGTGGCCAGCTCCACCCAGAAATTCCAGGACCT...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGAGGTCCTGGAATTTCTaGGTGGAGCTGGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSERSWNF*VELATV
Trigger: CACTGTGGCCAGCTCCACCCAGAAATTCCAGGACCT...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATTTCACGCCCAGGTCCTaGAATTTCTGGGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHFTPRS*NFWVEL
Trigger: CAGCTCCACCCAGAAATTCCAGGACCTGGGCGTGAA...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGTTCACGCCCAGGTCCTaGAATTTCTGGGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEFTPRS*NFWVEL
Trigger: CAGCTCCACCCAGAAATTCCAGGACCTGGGCGTGAA...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCTTCACGCCCAGGTCCTaGAATTTCTGGGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLFTPRS*NFWVEL
Trigger: CAGCTCCACCCAGAAATTCCAGGACCTGGGCGTGAA...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCGGTGGGCTGACTCCTaGGGTTTGACGATGGTGATC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLRWADS*GLTMVI
Trigger: GATCACCATCGTCAAACCCCAGGAGTCAGCCCACCG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGCACCTCGGGGACCTTaGAGGCAGGGGGCTCCATCC +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGAPRGP*RQGAPS
Trigger: GGATGGAGCCCCCTGCCTCCAAGGTCCCCGAGGTGC...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCTGGGGGCTGCGTCGGTaGCAGGGGCAGTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSWGLRR*QGQWAP
Trigger: AGGTGCCCACTGCCCCTGCCACCGACGCAGCCCCCA...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGCGCCTCAGCAGGCTTaGGCATCTGGATCTCCACCC +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDAPQQA*ASGSPP
Trigger: GGGTGGAGATCCAGATGCCCAAGCCTGCTGAGGCGC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGCAGGGGGCTGGGGCTTaGGCTCCAGCCTGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGQGAGA*APACSA
Trigger: TGCAGAGCAGGCTGGAGCCCAAGCCCCAGCCCCCTG...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGCATCTGCTCCAGGATaGAGTCAATCCCCACGTAGC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEASAPG*SQSPRS
Trigger: GCTACGTGGGGATTGACTCCATCCTGGAGCAGATGC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGCATCTGCTCCAGGATaGAGTCAATCCCCACGTAGC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHASAPG*SQSPRS
Trigger: GCTACGTGGGGATTGACTCCATCCTGGAGCAGATGC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGCATCTGCTCCAGGATaGAGTCAATCCCCACGTAGC +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLASAPG*SQSPRS
Trigger: GCTACGTGGGGATTGACTCCATCCTGGAGCAGATGC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGCATCTGCTCCAGGATaGAGTCAATCCCCACGTAGC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITASAPG*SQSPRS
Trigger: GCTACGTGGGGATTGACTCCATCCTGGAGCAGATGC...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGTGGTCCCCGAACCCTaGTGTGTCAATCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHVVPEP*CVNHCQ
Trigger: CTGACAGTGATTGACACACCAGGGTTCGGGGACCAC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGTGGTCCCCGAACCCTaGTGTGTCAATCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITVVPEP*CVNHCQ
Trigger: CTGACAGTGATTGACACACCAGGGTTCGGGGACCAC...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTTCTCGTTGTTGATGTaGTCCCCGAACCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDFSLLM*SPNPGV
Trigger: CACACCAGGGTTCGGGGACCACATCAACAACGAGAA...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCATTCTCGTTGTTGATGTaGTCCCCGAACCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSFSLLM*SPNPGV
Trigger: CACACCAGGGTTCGGGGACCACATCAACAACGAGAA...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACATCCGCTGTTTGAAGTaGACCCTCTCCTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHIRCLK*TLSSRV
Trigger: CACCCTGGAGGAGAGGGTCCACTTCAAACAGCGGAT...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGATCCGCTGTTTGAAGTaGACCCTCTCCTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEIRCLK*TLSSRV
Trigger: CACCCTGGAGGAGAGGGTCCACTTCAAACAGCGGAT...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCATCCGCTGTTTGAAGTaGACCCTCTCCTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLIRCLK*TLSSRV
Trigger: CACCCTGGAGGAGAGGGTCCACTTCAAACAGCGGAT...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACGCCCACCACAGCAAATaGGATCATCTCCCGGAACTT +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDAHHSK*DHLPEL
Trigger: AAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGC...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGCCCACCACAGCAAATaGGATCATCTCCCGGAACTT +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSAHHSK*DHLPEL
Trigger: AAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCTCTTGCCGTTGACCTaGTACTCGTGGTCACTGCCC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLLLPLT*YSWSLP
Trigger: GGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCGATGGTACCCCACTTaGTCTTCCTCCCAAGGATCC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSERWYPT*SSSQGS
Trigger: GGATCCTTGGGAGGAAGACCAAGTGGGGTACCATCG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCCGATGGTACCCCACTTaGTCTTCCTCCCAAGGATCC +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLRWYPT*SSSQGS
Trigger: GGATCCTTGGGAGGAAGACCAAGTGGGGTACCATCG...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCGATGGTACCCCACTTaGTCTTCCTCCCAAGGATCC +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHRWYPT*SSSQGS
Trigger: GGATCCTTGGGAGGAAGACCAAGTGGGGTACCATCG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCGGTACGCCTCGAAGTaGATGCTGCTGGTGATGTCC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLRYASK*MLLVMS
Trigger: GGACATCACCAGCAGCATCCACTTCGAGGCGTACCG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATTCTCCTCCATGCCGTTaGCCATGGCGCTGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDSPPCR*PWRCCP
Trigger: AGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGA...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCCCTTCCCTTGTTTCCTaGCAGCATGTCGAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLPSLVS*QHVEGV
Trigger: CACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGG...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCCTTCCCTTGTTTCCTaGCAGCATGTCGAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEPSLVS*QHVEGV
Trigger: CACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTTGCAAGTGCGAGGCCTaGCCCCCACCCCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGCKCEA*PPPQGL
Trigger: GAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCA...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGTGCAAGTGCGAGGCCTaGCCCCCACCCCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGCKCEA*PPPQGL
Trigger: GAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCA...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTCAGGGCCGATGGGGATaGAGGGGAGCGTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGQGRWG*RGACSP
Trigger: TGGGCTGCACGCTCCCCTCCATCCCCATCGGCCCTG...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGCAGGGCCGATGGGGATaGAGGGGAGCGTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGQGRWG*RGACSP
Trigger: TGGGCTGCACGCTCCCCTCCATCCCCATCGGCCCTG...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGGTGGCAGGGGACCCTaGAGTTTTCTACCCTTAGGA +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEGGRGP*SFLPLG
Trigger: TCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCATGTGTGCACCTGAGTaGAGTCTCATCAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLMCAPE*SLIRPL
Trigger: GAGGGGCCTGATGAGACTCCACTCAGGTGCACACAT...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATCCTTCCTCTCTTGGGTaGGGAGGGAGTCAGACGCCC +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDPSSLG*GGSQTP
Trigger: GGGCGTCTGACTCCCTCCCCACCCAAGAGAGGAAGG...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGCTCCCTGTCTCGCACTaGCTGCTCCGCCCGCCTGTC +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGLPVSH*LLRPPV
Trigger: GACAGGCGGGCGGAGCAGCCAGTGCGAGACAGGGAG...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423034.6
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCCTCTCCTATCTCCCTaGGTGCCTGCAAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEPLLSP*VPAKSF
Trigger: GAAGGACTTTGCAGGCACCCAGGGAGATAGGAGAGG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGATGACACTCCTGCCTaGACCCCTTCTCTGAAACCC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHDDTPA*TPSLKP
Trigger: GGGTTTCAGAGAAGGGGTCCAGGCAGGAGTGTCATC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGATGACACTCCTGCCTaGACCCCTTCTCTGAAACCC +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLDDTPA*TPSLKP
Trigger: GGGTTTCAGAGAAGGGGTCCAGGCAGGAGTGTCATC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACGGAAGGGAGGCTCGGTaGGGAATTGCTCCAAGGGGG +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHGREAR*GIAPRG
Trigger: CCCCCTTGGAGCAATTCCCCACCGAGCCTCCCTTCC...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR TCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCGGGCCGAGGGTTCTaGGTTCTTCACGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGAGRGF*VLHAQV
Trigger: GACCTGGGCGTGAAGAACTCAGAACCCTCGGCCCGC...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR TCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGACACCTCGGCCCTCTTaGGCCCGAACCGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKTPRPS*ARTGTG
Trigger: GCCCGTCCCGGTTCGGGCTCAAGAGGGCCGAGGTGT...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR TCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATCATCCTCCGGTGGGCTaGCTCCTGGGGTTTGACGAT +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDHPPVG*LLGFDD
Trigger: ATCGTCAAACCCCAGGAGTCAGCCCACCGGAGGATG...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR TCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGGGGATGCGCTCCTCTaGGGTGGGCTGCACCGACTT +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGGDALL*GGLHRL
Trigger: AAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCC...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCAGCAGTTCTCGTTGTTaGTGTGGTCCCCGAACCCTG +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLSSSRC*CGPRTL
Trigger: CAGGGTTCGGGGACCACATCAACAACGAGAACTGCT...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAACGATGTCCAGGGGCCTaGGGGAGTGGCCGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGERCPGA*GSGRWR
Trigger: CCGCCACCGGCCACTCCCTCAGGCCCCTGGACATCG...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCCCGAAGCTGCTCTTCTaGGCCCTCGGGGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSPKLLF*ALGEPG
Trigger: GCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGG...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCAGTCTGCGGATGGCTaGGATAAAGGCACTTTCTGC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEQSADG*DKGTFC
Trigger: GCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCAGTCTGCGGATGGCTaGGATAAAGGCACTTTCTGC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITQSADG*DKGTFC
Trigger: GCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTG...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATCCTTCAGATCCCTGCTaGATCCTGGGGAAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDPSDPC*ILGKPC
Trigger: GCAGGGCTTCCCCAGGATTCAGCAGGGATCTGAAGG...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR GCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTTTCCCTGTCCCGCGATaGTACGATTTCCTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITFPVPR*YDFLGL
Trigger: AAGCCCAAGGAAATCGTAGCATCGCGGGACAGGGAA...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS-3UTR GCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGTGCAGAGGTCCCGAGTaGGGCTTCCGGCAGCCTCCT +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGCRGPE*GFRQPP
Trigger: AGGAGGCTGCCGGAAGCCGCACTCGGGACCTCTGCA...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS-3UTR GCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGCAATGGACAGCTCAGTaGGCCGGGACACCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGQWTAQ*AGTPAR
Trigger: CCGAGCCGGTGTCCCGGCGCACTGAGCTGTCCATTG...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR GCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTCAATGGACAGCTCAGTaGGCCGGGACACCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGQWTAQ*AGTPAR
Trigger: CCGAGCCGGTGTCCCGGCGCACTGAGCTGTCCATTG...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR GCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCCACCCTCTTGGGGGCTaGGTCGGTGGCAGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSHPLGG*VGGRGS
Trigger: ACTGCCCCTGCCACCGACGCAGCCCCCAAGAGGGTG...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR GCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGTTGGACAGCAGGTCTaGGGTGATCCGCTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHVGQQV*GDPLFE
Trigger: TTCAAACAGCGGATCACCGCAGACCTGCTGTCCAAC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGTTGGACAGCAGGTCTaGGGTGATCCGCTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEVGQQV*GDPLFE
Trigger: TTCAAACAGCGGATCACCGCAGACCTGCTGTCCAAC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGTTGGACAGCAGGTCTaGGGTGATCCGCTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLVGQQV*GDPLFE
Trigger: TTCAAACAGCGGATCACCGCAGACCTGCTGTCCAAC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGGGGGTACACGTCGATaGCGTTGGACAGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDGGTRR*RWTAGL
Trigger: CAGACCTGCTGTCCAACGGCATCGACGTGTACCCCC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACGGGGGTACACGTCGATaGCGTTGGACAGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHGGTRR*RWTAGL
Trigger: CAGACCTGCTGTCCAACGGCATCGACGTGTACCCCC...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR GCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGGGTGCTCTCACCCCTaGCTGTGGCTCCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGGCSHP*LWLQCS
Trigger: GCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCC...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCACAGACGGATGATCTaGACACCGAAGCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHHRRMI*TPKLLF
Trigger: GAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCACAGACGGATGATCTaGACACCGAAGCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHHRRMI*TPKLLF
Trigger: GAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCACAGACGGATGATCTaGACACCGAAGCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEHRRMI*TPKLLF
Trigger: GAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAACGCATCAGCAGCACCTaGAGCCCGGTGGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGERISST*SPVGAG
Trigger: CCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCG...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCGCCACGGCCCACACGTaGCCCCGCCAACCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSATAHT*PRQPSF
Trigger: GAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGCTGCCACGAAACCTTaGTCTTCAGCTGTGGACTGT +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHAATKP*SSAVDC
Trigger: ACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGCTGCCACGAAACCTTaGTCTTCAGCTGTGGACTGT +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLAATKP*SSAVDC
Trigger: ACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGGGGCCGGGCCGTGCTaGCACGAAACCTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGGAGPC*HETLLF
Trigger: GAAGAGCAAGGTTTCGTGGCAGCACGGCCCGGCCCC...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGACTTTGGTCATCTGTaGCCTGCAAAGACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLDFGHL*PAKTAP
Trigger: GGGGGCTGTCTTTGCAGGGCACAGATGACCAAAGTC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCTTCCCGTGGACCAGCTaGACTCCCGGCGGGCATGCC +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSFPWTS*TPGGHA
Trigger: GGCATGCCCGCCGGGAGTGCAGCTGGTCCACGGGAA...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427674.6
CDS-3UTR GCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCGTGCTCCCACGGCGCTaGTCCTGCGCCCATTCCCAG +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSVLPRR*SCAHSQ
Trigger: CTGGGAATGGGCGCAGGAGCAGCGCCGTGGGAGCAC...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427674.6
CDS-3UTR GCA 90 bp CCGGCTCGGCCGCCTTGGGGCCCGAGAGCTCCACCCTCCGCAGGGACGCCTTGGAAGCAAGATTTGAAATaGACGGGTCCAGAAGCAAAT +
Preference number: 4 (lower is better)
Translates to: PARPPWGPRAPPSAGTPWKQDLK*TGPEAN
Trigger: ATTTGCTTCTGGACCCGTGCATTTCAAATCTTGCTT...CCAAGGCGTCCCTGCGGAGGGTGGAGCTCTCGGGCCCCAAGGCGGCCGAGCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTCCCTCCGGGGTGGGGTaGAGTTGGGTGTCTCGACCT +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGPSGVG*SWVSRP
Trigger: AGGTCGAGACACCCAACTCCACCCCACCCCGGAGGG...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGCTGGACCCTCCGGGGTaGGGTGGAGTTGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGLDPPG*GGVGCL
Trigger: GAGACACCCAACTCCACCCCACCCCGGAGGGTCCAG...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCAGGTCCTGGAATTTCTaGGTGGAGCTGGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLRSWNF*VELATV
Trigger: CACTGTGGCCAGCTCCACCCAGAAATTCCAGGACCT...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGTCCGCAGGGACGCCTTaGGGGAGCGTTGGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGSAGTP*GSVGLG
Trigger: CCCTAAGCCAACGCTCCCCCAAGGCGTCCCTGCGGA...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACGTTCTCCACCTGCTTaGACGAGATGTCAATGGACA +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSRSPPA*TRCQWT
Trigger: TGTCCATTGACATCTCGTCCAAGCAGGTGGAGAACG...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTCCGAGGGGCCGGTTCTaGCGTCTTGTGGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGPRGRF*RLVAQH
Trigger: GTGTTGGGCCACAAGACGCCAGAACCGGCCCCTCGG...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGCGGTGGCAGGGGCAGTaGGCACCTCGGGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKRWQGQ*APRGPW
Trigger: CCAAGGTCCCCGAGGTGCCCACTGCCCCTGCCACCG...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGTGGGGGCTGCGTCGGTaGCAGGGGCAGTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKWGLRR*QGQWAP
Trigger: AGGTGCCCACTGCCCCTGCCACCGACGCAGCCCCCA...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGGATCTCCACCCTCTTaGGGGCTGCGTCGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGGSPPS*GLRRWQ
Trigger: CTGCCACCGACGCAGCCCCCAAGAGGGTGGAGATCC...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAACTGGGCTGGGGGCGGTaGGCGCCTCAGCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGELGWGR*APQQAW
Trigger: CCAAGCCTGCTGAGGCGCCCACCGCCCCCAGCCCAG...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACCGAAGCCCTGCTTCATaGCCTTCCGGCGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHRSPAS*PSGASA
Trigger: AGCAGATGCGCCGGAAGGCCATGAAGCAGGGCTTCG...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGTGCGCTCCTCTGAGGTaGGCTGCACCGACTTCCGGC +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGCAPLR*AAPTSG
Trigger: GCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCA...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGTGGTCCCCGAACCCTaGTGTGTCAATCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLVVPEP*CVNHCQ
Trigger: CTGACAGTGATTGACACACCAGGGTTCGGGGACCAC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTTTCTCGTTGTTGATGTaGTCCCCGAACCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITFSLLM*SPNPGV
Trigger: CACACCAGGGTTCGGGGACCACATCAACAACGAGAA...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGCCCACCACAGCAAATaGGATCATCTCCCGGAACTT +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITAHHSK*DHLPEL
Trigger: AAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGC...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGCGGGGGTGGGCAGGGTaGCGTCTACATCTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKRGWAG*RLHLRG
Trigger: GCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCG...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACAGCATGTCGAAGGGGTaGGGAACGATGACAAATGGA +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANSMSKG*GTMTNG
Trigger: TCCATTTGTCATCGTTCCCCACCCCTTCGACATGCT...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGTCATGTCAATTCAGTaGGTGCTCTCACCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHVMSIQ*VLSPLP
Trigger: AGGCAGGGGTGAGAGCACCCACTGAATTGACATGAC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGTCATGTCAATTCAGTaGGTGCTCTCACCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEVMSIQ*VLSPLP
Trigger: AGGCAGGGGTGAGAGCACCCACTGAATTGACATGAC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGGCTGCATTCTCCCCTaGGCTCTGACACACTCCAGG +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDGCILP*ALTHSR
Trigger: CCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGATGGCCACACCATGTaGCGGGCAGGGGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGDGHTM*RAGGPG
Trigger: ACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCGGGGCTTGGAGTGGCTaGGCAGTCGGTGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSGAWSG*AVGGRG
Trigger: TCCCCTGCCACCGACTGCCCAGCCACTCCAAGCCCC...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCCCAGGGGGCTTGGAGTaGCTGGGCAGTCGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSPGGLE*LGSRWQ
Trigger: CTGCCACCGACTGCCCAGCCACTCCAAGCCCCCTGG...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACAGTGGCAGGGGTGGCTaGCTGGGCATTAATGTAACT +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHSGRGG*LGINVT
Trigger: AGTTACATTAATGCCCAGCCAGCCACCCCTGCCACT...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCAGTGGCAGGGGTGGCTaGCTGGGCATTAATGTAACT +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLSGRGG*LGINVT
Trigger: AGTTACATTAATGCCCAGCCAGCCACCCCTGCCACT...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTAGTGGCAGGGGTGGCTaGCTGGGCATTAATGTAACT +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITSGRGG*LGINVT
Trigger: AGTTACATTAATGCCCAGCCAGCCACCCCTGCCACT...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGAGTGGCAGGGGTGGCTaGCTGGGCATTAATGTAACT +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSESGRGG*LGINVT
Trigger: AGTTACATTAATGCCCAGCCAGCCACCCCTGCCACT...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAAGCAGGAAGGGACTTTaGTCATCTGTGCCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSSRKGL*SSVPCK
Trigger: TTTGCAGGGCACAGATGACCAAAGTCCCTTCCTGCT...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGAAGCATCTCAAGGCTaGGATGCTGCTGCCCACCCC +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDEASQG*DAAAHP
Trigger: GGGGTGGGCAGCAGCATCCCAGCCTTGAGATGCTTC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGGGGCCCGAGAGCTCCACCCTCCGCAGGGACGCCTTGGGGGAGCGTTGGCTTAAGATCTTTTCAAGGCTaGGCCACTGGAGTCACCAAG +
Preference number: 4 (lower is better)
Translates to: WGPRAPPSAGTPWGSVGLRSFQG*ATGVTK
Trigger: CTTGGTGACTCCAGTGGCCCAGCCTTGAAAAGATCT...TAAGCCAACGCTCCCCCAAGGCGTCCCTGCGGAGGGTGGAGCTCTCGGGCCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCCGGCAGGGGAGCCGGTaGCACTCACCACACCCTGTC +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSRQGSR*HSPHPV
Trigger: GACAGGGTGTGGTGAGTGCCACCGGCTCCCCTGCCG...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTAACCCCAGGCCGGGGTaGGGTAGGAGTCAGCGAGAG +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGNPRPG*GRSQRE
Trigger: CTCTCGCTGACTCCTACCCCACCCCGGCCTGGGGTT...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGTCCGGAGCCGGCCACTaGAGGTCCGCGTGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKSGAGH*RSACLP
Trigger: TGGGAGGCACGCGGACCTCCAGTGGCCGGCTCCGGA...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431235.6
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTATCAAAGGGGCTTTGTaGTCGCGGAACAAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITIKGAL*SRNKEP
Trigger: AGGCTCCTTGTTCCGCGACCACAAAGCCCCTTTGAT...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591088.5
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCCCCACAGCTTACCCTaGCCATTGACCCTACTCTCA +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLPHSLP*PLTLLS
Trigger: TGAGAGTAGGGTCAATGGCCAGGGTAAGCTGTGGGG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000592951.5
CDS-3UTR CCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGTCCGGGAACCGGGCTaGCACTCAATAAACAAATCA +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSVREPG*HSINKS
Trigger: TGATTTGTTTATTGAGTGCCAGCCCGGTTCCCGGAC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592951.5
CDS-3UTR TCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCGCGGGCCGAGGGTTCTaGGTTCTTCACGCCCAGGTC +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSAGRGF*VLHAQV
Trigger: GACCTGGGCGTGAAGAACTCAGAACCCTCGGCCCGC...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR TCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGGCCTTCTCGTTCCGTaGTGCAGGCGCCTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGGLLVP*CRRLLE
Trigger: CTCAAGCAGGCGCCTGCATCACGGAACGAGAAGGCC...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGGATCCTCTTGCCGTTaGCCTGGTACTCGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDGSSCR*PGTRGH
Trigger: GTGACCACGAGTACCAGGTCAACGGCAAGAGGATCC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACGGATCCTCTTGCCGTTaGCCTGGTACTCGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHGSSCR*PGTRGH
Trigger: GTGACCACGAGTACCAGGTCAACGGCAAGAGGATCC...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR TCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGCCGAAGCTGCTCTTCTaGGCCCTCGGGGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKPKLLF*ALGEPG
Trigger: GCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGG...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGTTCTCCCCTGGGCTCTaGCACACTCCAGGGGACAGG +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGFSPGL*HTPGDR
Trigger: CCTGTCCCCTGGAGTGTGTCAGAGCCCAGGGGAGAA...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGGCAGGGGTAGGGGCTaGGTGATGGCCACACCATGT +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGGRGRG*VMATPC
Trigger: ACATGGTGTGGCCATCACTCAGCCCCTACCCCTGCC...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCAGTCTGCGGATGGCTaGGATAAAGGCACTTTCTGC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLQSADG*DKGTFC
Trigger: GCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGCGTTACCATGGGCTCTaGGGGGAGGGGCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKRYHGL*GEGPRH
Trigger: GTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACG...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTCACCAGTGGGGGTGGTaGGGGGTCCTTCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGHQWGW*GVLPLL
Trigger: CAAGAGAGGAAGGACCCCTCACCACCCCCACTGGTG...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGCACCAGTGGGGGTGGTaGGGGGTCCTTCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGHQWGW*GVLPLL
Trigger: CAAGAGAGGAAGGACCCCTCACCACCCCCACTGGTG...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACTACAGAGAAGGAAAGTaGAGCATCTCAAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANYREGK*SISRLG
Trigger: TCCCAGCCTTGAGATGCTTCACTTTCCTTCTCTGTA...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCATACAGAGAAGGAAAGTaGAGCATCTCAAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSYREGK*SISRLG
Trigger: TCCCAGCCTTGAGATGCTTCACTTTCCTTCTCTGTA...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAAAGCCACATCCCCATTaGGAAAAGATGACACTCCTG +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSKPHPH*EKMTLL
Trigger: CAGGAGTGTCATCTTTTCTCAATGGGGATGTGGCTT...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000431235.6
ENST00000449803.6
CDS-3UTR TCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACAAGCCACATCCCCATTaGGAAAAGATGACACTCCTG +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDKPHPH*EKMTLL
Trigger: CAGGAGTGTCATCTTTTCTCAATGGGGATGTGGCTT...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000431235.6
ENST00000449803.6
CDS-3UTR GCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGGTCTGGTCGGTGGCTaGAGAGGTCCCGAGTGCGGC +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKGLVGG*RGPECG
Trigger: GCCGCACTCGGGACCTCTGCAGCCACCGACCAGACC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS-3UTR GCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGCACCCTCTTGGGGGCTaGGTCGGTGGCAGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKHPLGG*VGGRGS
Trigger: ACTGCCCCTGCCACCGACGCAGCCCCCAAGAGGGTG...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR GCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTCGTGATGCAGGCGCCTaGTTGAGCCCGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGRDAGA*LSPASL
Trigger: CAGAGATGCCGGGCTCAAGCAGGCGCCTGCATCACG...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACGCCTTCCGGCGCATCTaGTCCAGGATGGAGTCAATC +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHAFRRI*SRMESI
Trigger: GATTGACTCCATCCTGGAGCAGATGCGCCGGAAGGC...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR GCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATTTGAACTCGAAGCCCTaGTTCATGGCCTTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDLNSKP*FMAFRR
Trigger: GCGCCGGAAGGCCATGAAGCAGGGCTTCGAGTTCAA...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACTTGAACTCGAAGCCCTaGTTCATGGCCTTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHLNSKP*FMAFRR
Trigger: GCGCCGGAAGGCCATGAAGCAGGGCTTCGAGTTCAA...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR GCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACTCCTCTGAGGTGGGCTaGACCGACTTCCGGCTGATT +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHSSEVG*TDFRLI
Trigger: AATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGA...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR GCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGTTGGACAGCAGGTCTaGGGTGATCCGCTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLVGQQV*GDPLFE
Trigger: TTCAAACAGCGGATCACCGCAGACCTGCTGTCCAAC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACTTGATGTTCTGCATGTaGGTCCTGATGAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANLMFCM*VLMRRS
Trigger: GGACCTTCTCATCAGGACGCACATGCAGAACATCAA...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTTGATGTTCTGCATGTaGGTCCTGATGAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDLMFCM*VLMRRS
Trigger: GGACCTTCTCATCAGGACGCACATGCAGAACATCAA...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCATTGATGTTCTGCATGTaGGTCCTGATGAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSLMFCM*VLMRRS
Trigger: GGACCTTCTCATCAGGACGCACATGCAGAACATCAA...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCACAGACGGATGATCTaGACACCGAAGCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLHRRMI*TPKLLF
Trigger: GAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGCTGCCACGAAACCTTaGTCTTCAGCTGTGGACTGT +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLAATKP*SSAVDC
Trigger: ACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATTGGTCATCTGTGCCCTaGAAAGACAGCCCCCATGGG +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDWSSVP*KDSPHG
Trigger: CCCATGGGGGCTGTCTTTGCAGGGCACAGATGACCA...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGATCTCAAGGCTGGGATaGTGCTGCCCACCCCCACCC +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGISRLG*CCPPPP
Trigger: GGGTGGGGGTGGGCAGCAGCATCCCAGCCTTGAGAT...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTATCTCAAGGCTGGGATaGTGCTGCCCACCCCCACCC +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGISRLG*CCPPPP
Trigger: GGGTGGGGGTGGGCAGCAGCATCCCAGCCTTGAGAT...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCTATCTCCCTGGGTaGCTGCAAAGTCCTTCAGAT +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHSYLPG*LQSPSD
Trigger: ATCTGAAGGACTTTGCAGGCACCCAGGGAGATAGGA...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR GCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGGCATCTACAGCTGGTaGCCTTGCCCCGGCGAAGAC +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGGIYSW*PCPGED
Trigger: GTCTTCGCCGGGGCAAGGGCACCAGCTGTAGATGCC...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR GCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTCGGGAAAGAGACCTGTaGTCCCACGGCGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGRERDL*SHGAAP
Trigger: AGGAGCAGCGCCGTGGGAGCACAGGTCTCTTTCCCG...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427674.6
CDS-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTTCCTCTGTCCTGGGCTaGCCCCAGCCCTTCTTCACC +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGSSVLG*PQPFFT
Trigger: GGTGAAGAAGGGCTGGGGCCAGCCCAGGACAGAGGA...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCCCCTCCGGGGTGGGGTaGAGTTGGGTGTCTCGACCT +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSPSGVG*SWVSRP
Trigger: AGGTCGAGACACCCAACTCCACCCCACCCCGGAGGG...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCTCCGCAGGGACGCCTTaGGGGAGCGTTGGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSSAGTP*GSVGLG
Trigger: CCCTAAGCCAACGCTCCCCCAAGGCGTCCCTGCGGA...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATTGGACGAGATGTCAATaGACAGCTCAGTGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDWTRCQ*TAQCAG
Trigger: CCCGGCGCACTGAGCTGTCCATTGACATCTCGTCCA...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCCGTTCTCCACCTGCTTaGACGAGATGTCAATGGACA +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLRSPPA*TRCQWT
Trigger: TGTCCATTGACATCTCGTCCAAGCAGGTGGAGAACG...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCGTTCTCCACCTGCTTaGACGAGATGTCAATGGACA +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSERSPPA*TRCQWT
Trigger: TGTCCATTGACATCTCGTCCAAGCAGGTGGAGAACG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAACCGGGACGGGCCGATaGCCCCGGCGTTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGETGTGR*PRRSPP
Trigger: AGGTGGAGAACGCCGGGGCCATCGGCCCGTCCCGGT...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGGTTCTGGCGTCTTGTaGCCCAACACCTCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGGSGVL*PNTSAL
Trigger: GAGGGCCGAGGTGTTGGGCCACAAGACGCCAGAACC...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGGCTCCATCCTCCGGTaGGCTGACTCCTGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGGSILR*ADSWGL
Trigger: CAAACCCCAGGAGTCAGCCCACCGGAGGATGGAGCC...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAATGGGGGCTGCGTCGGTaGCAGGGGCAGTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEWGLRR*QGQWAP
Trigger: AGGTGCCCACTGCCCCTGCCACCGACGCAGCCCCCA...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCGGATCTCCACCCTCTTaGGGGCTGCGTCGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSGSPPS*GLRRWQ
Trigger: CTGCCACCGACGCAGCCCCCAAGAGGGTGGAGATCC...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGCGCCTCAGCAGGCTTaGGCATCTGGATCTCCACCC +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGAPQQA*ASGSPP
Trigger: GGGTGGAGATCCAGATGCCCAAGCCTGCTGAGGCGC...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCTGCGCTCCTCTGAGGTaGGCTGCACCGACTTCCGGC +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSCAPLR*AAPTSG
Trigger: GCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCA...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTTCTCGTTGTTGATGTaGTCCCCGAACCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLFSLLM*SPNPGV
Trigger: CACACCAGGGTTCGGGGACCACATCAACAACGAGAA...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGAGGGGCCTGAGGGAGTaGCCGGTGGCGGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKRGLRE*PVAGMK
Trigger: CTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCT...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGCCCACCACAGCAAATaGGATCATCTCCCGGAACTT +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLAHHSK*DHLPEL
Trigger: AAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATCTCTTGCCGTTGACCTaGTACTCGTGGTCACTGCCC +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDLLPLT*YSWSLP
Trigger: GGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAG...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACCTCTTGCCGTTGACCTaGTACTCGTGGTCACTGCCC +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHLLPLT*YSWSLP
Trigger: GGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAG...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTTCTCCTCCATGCCGTTaGCCATGGCGCTGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGSPPCR*PWRCCP
Trigger: AGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGA...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGTCTCCTCCATGCCGTTaGCCATGGCGCTGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGSPPCR*PWRCCP
Trigger: AGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGA...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAACGGGGGTGGGCAGGGTaGCGTCTACATCTCCGGGGC +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGERGWAG*RLHLRG
Trigger: GCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCG...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGGGACGGAAATGACTTaGGGGCAGGATCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGGTEMT*GQDPGG
Trigger: ACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCC...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGTCATGTCAATTCAGTaGGTGCTCTCACCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLVMSIQ*VLSPLP
Trigger: AGGCAGGGGTGAGAGCACCCACTGAATTGACATGAC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGGCGTGAGAGGGGGATaGCAGGGAGATGAAGACGCC +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGGVRGG*QGDEDA
Trigger: GGCGTCTTCATCTCCCTGCCATCCCCCTCTCACGCC...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCAGTGGCAGGGGTGGCTaGCTGGGCATTAATGTAACT +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLSGRGG*LGINVT
Trigger: AGTTACATTAATGCCCAGCCAGCCACCCCTGCCACT...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACAGCAGGAAGGGACTTTaGTCATCTGTGCCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHSRKGL*SSVPCK
Trigger: TTTGCAGGGCACAGATGACCAAAGTCCCTTCCTGCT...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTCCTTCCTCTCTTGGGTaGGGAGGGAGTCAGACGCCC +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGPSSLG*GGSQTP
Trigger: GGGCGTCTGACTCCCTCCCCACCCAAGAGAGGAAGG...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGACATGGCCTGGGCCCTaGCGCTGGCCACTCATTTCC +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGTWPGP*RWPLIS
Trigger: GGAAATGAGTGGCCAGCGCCAGGGCCCAGGCCATGT...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGAGATCTTTTCAAGGCTaGGCCACTGGAGTCACCAAG +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSERSFQG*ATGVTK
Trigger: CTTGGTGACTCCAGTGGCCCAGCCTTGAAAAGATCT...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427177.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCAGAAACTTGAGCCCATaGGGGCACTTCAGGTCCTAT +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLRNLSP*GHFRSY
Trigger: ATAGGACCTGAAGTGCCCCCATGGGCTCAAGTTTCT...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR TCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTCATCCTCCGGTGGGCTaGCTCCTGGGGTTTGACGAT +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGHPPVG*LLGFDD
Trigger: ATCGTCAAACCCCAGGAGTCAGCCCACCGGAGGATG...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR TCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAATGCAGGCGCCTGCTTaGGCCCGGCATCTCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEMQAPA*ARHLWG
Trigger: CCCCCAGAGATGCCGGGCTCAAGCAGGCGCCTGCAT...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGGGGATGCGCTCCTCTaGGGTGGGCTGCACCGACTT +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKGDALL*GGLHRL
Trigger: AAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATAGCAGTTCTCGTTGTTaGTGTGGTCCCCGAACCCTG +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDSSSRC*CGPRTL
Trigger: CAGGGTTCGGGGACCACATCAACAACGAGAACTGCT...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACAGCAGTTCTCGTTGTTaGTGTGGTCCCCGAACCCTG +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHSSSRC*CGPRTL
Trigger: CAGGGTTCGGGGACCACATCAACAACGAGAACTGCT...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR TCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGCCCTCTCCTCCAGGGTaGGTGTGTCCGCCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKPSPPG*VCPPWR
Trigger: TCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGG...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGCGCTGCTGCCCTCGTTaGGGCGCTTCACACGGTACG +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKRCCPR*GASHGT
Trigger: CGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCG...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAACCGAAGCTGCTCTTCTaGGCCCTCGGGGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEPKLLF*ALGEPG
Trigger: GCCTGGCTCCCCGAGGGCTCAGAAGAGCAGCTTCGG...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAACGTTACCATGGGCTCTaGGGGGAGGGGCCCAGGCAC +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGERYHGL*GEGPRH
Trigger: GTGCCTGGGCCCCTCCCCTCAGAGCCCATGGTAACG...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATTACACTCCTTCTCGCTaGCCTTCTCCTGGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDYTPSR*PSPGCK
Trigger: CTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTA...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATTACAGAGAAGGAAAGTaGAGCATCTCAAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHYREGK*SISRLG
Trigger: TCCCAGCCTTGAGATGCTTCACTTTCCTTCTCTGTA...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTTACAGAGAAGGAAAGTaGAGCATCTCAAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITYREGK*SISRLG
Trigger: TCCCAGCCTTGAGATGCTTCACTTTCCTTCTCTGTA...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCTTCTTAAAGCTGAGTaGGTCCCTGATGCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHLLKAE*VPDAGN
Trigger: ATTGCCTGCATCAGGGACTCACTCAGCTTTAAGAAG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR TCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGAACCAAGACACCAGGTaGGCCGCCCCGGGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGNQDTR*AAPGKR
Trigger: TCTCTTTCCCGGGGCGGCTCACCTGGTGTCTTGGTT...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427674.6
CDS-3UTR TCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATCCCATTGAGAAAAGATaGCACTCCTGCCTGGACCCC +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDPIEKR*HSCLDP
Trigger: GGGGTCCAGGCAGGAGTGTCATCTTTTCTCAATGGG...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431235.6
ENST00000449803.6
CDS-3UTR TCA 90 bp GCCACTGGAGTCACCAAGCCTCCGGAGCCGGCCACTGGAGGTCCGCGTGCCTCCGTCCAGAAGCAAATCTaGGTAAGACTTCTTCATGGT +
Preference number: 4 (lower is better)
Translates to: ATGVTKPPEPATGGPRASVQKQI*VRLLHG
Trigger: ACCATGAAGAAGTCTTACTCAGATTTGCTTCTGGAC...GGAGGCACGCGGACCTCCAGTGGCCGGCTCCGGAGGCTTGGTGACTCCAGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS-3UTR GCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAACACCCTCTTGGGGGCTaGGTCGGTGGCAGGGGCAGT +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEHPLGG*VGGRGS
Trigger: ACTGCCCCTGCCACCGACGCAGCCCCCAAGAGGGTG...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR GCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCCGTGATGCAGGCGCCTaGTTGAGCCCGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSRDAGA*LSPASL
Trigger: CAGAGATGCCGGGCTCAAGCAGGCGCCTGCATCACG...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATTTGATGTTCTGCATGTaGGTCCTGATGAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHLMFCM*VLMRRS
Trigger: GGACCTTCTCATCAGGACGCACATGCAGAACATCAA...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCTTGATGTTCTGCATGTaGGTCCTGATGAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLLMFCM*VLMRRS
Trigger: GGACCTTCTCATCAGGACGCACATGCAGAACATCAA...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTTGATGTTCTGCATGTaGGTCCTGATGAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHLMFCM*VLMRRS
Trigger: GGACCTTCTCATCAGGACGCACATGCAGAACATCAA...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTTTGATGTTCTGCATGTaGGTCCTGATGAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITLMFCM*VLMRRS
Trigger: GGACCTTCTCATCAGGACGCACATGCAGAACATCAA...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAATGTCCTTGATGTTCTaGATGTGCGTCCTGATGAGA +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSMSLMF*MCVLMR
Trigger: TCTCATCAGGACGCACATGCAGAACATCAAGGACAT...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACATGTCCTTGATGTTCTaGATGTGCGTCCTGATGAGA +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDMSLMF*MCVLMR
Trigger: TCTCATCAGGACGCACATGCAGAACATCAAGGACAT...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGGGTGCTCTCACCCCTaGCTGTGGCTCCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKGCSHP*LWLQCS
Trigger: GCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGCGCATCAGCAGCACCTaGAGCCCGGTGGGGGCGGGG +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGERISST*SPVGAG
Trigger: CCCCGCCCCCACCGGGCTGCAGGTGCTGCTGATGCG...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGCTGTCTCGCACTGGCTaGTCCGCCCGCCTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKLSRTG*SARLSR
Trigger: CCTTGACAGGCGGGCGGAGCAGCCAGTGCGAGACAG...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423034.6
CDS-3UTR GCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGTGGGGCCAGCACCCCTaGGGCAGCCCTACGGCCACC +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEWGQHP*GSPTAT
Trigger: GGTGGCCGTAGGGCTGCCGCAGGGGTGCTGGCCCCA...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR GCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGGGAGGGACCTCGACTaGCTGGGAAGGGAGGCTCGG +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEGRDLD*LGREAR
Trigger: CCGAGCCTCCCTTCCCAGGCAGTCGAGGTCCCTCCC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591088.5
CDS-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGCCCTCCGGGGTGGGGTaGAGTTGGGTGTCTCGACCT +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKPSGVG*SWVSRP
Trigger: AGGTCGAGACACCCAACTCCACCCCACCCCGGAGGG...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp TTGGGGGAGCGTTGGCTTAGGGAGTCCACATGGCGGGCCGAGGGTTCTGAGTTCAGGTCCTGGAATTTCTaGGTGGAGCTGGCCACAGTG +
Preference number: 4 (lower is better)
Translates to: LGERWLRESTWRAEGSEFRSWNF*VELATV
Trigger: CACTGTGGCCAGCTCCACCCAGAAATTCCAGGACCT...GAACTCAGAACCCTCGGCCCGCCATGTGGACTCCCTAAGCCAACGCTCCCCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATTTCACGCCCAGGTCCTaGAATTTCTGGGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDFTPRS*NFWVEL
Trigger: CAGCTCCACCCAGAAATTCCAGGACCTGGGCGTGAA...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGCTTAGGGAGTCCACATaGCGGGCCGAGGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGLREST*RAEGSE
Trigger: CTCAGAACCCTCGGCCCGCCATGTGGACTCCCTAAG...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTCTTAGGGAGTCCACATaGCGGGCCGAGGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGLREST*RAEGSE
Trigger: CTCAGAACCCTCGGCCCGCCATGTGGACTCCCTAAG...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCGTTCTCCACCTGCTTaGACGAGATGTCAATGGACA +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLRSPPA*TRCQWT
Trigger: TGTCCATTGACATCTCGTCCAAGCAGGTGGAGAACG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCGGCTCCATCCTCCGGTaGGCTGACTCCTGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSGSILR*ADSWGL
Trigger: CAAACCCCAGGAGTCAGCCCACCGGAGGATGGAGCC...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGTGTCGCCAACGCAGCTaGGAGCCGCCTCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKCRQRS*EPPQWP
Trigger: AGGCCACTGAGGCGGCTCCCAGCTGCGTTGGCGACA...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACGCATCTGCTCCAGGATaGAGTCAATCCCCACGTAGC +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHASAPG*SQSPRS
Trigger: GCTACGTGGGGATTGACTCCATCCTGGAGCAGATGC...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACGTGGTCCCCGAACCCTaGTGTGTCAATCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHVVPEP*CVNHCQ
Trigger: CTGACAGTGATTGACACACCAGGGTTCGGGGACCAC...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAAGGGGCCTGAGGGAGTaGCCGGTGGCGGGGATGAAG +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGERGLRE*PVAGMK
Trigger: CTTCATCCCCGCCACCGGCCACTCCCTCAGGCCCCT...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATATCCGCTGTTTGAAGTaGACCCTCTCCTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDIRCLK*TLSSRV
Trigger: CACCCTGGAGGAGAGGGTCCACTTCAAACAGCGGAT...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACATCCGCTGTTTGAAGTaGACCCTCTCCTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHIRCLK*TLSSRV
Trigger: CACCCTGGAGGAGAGGGTCCACTTCAAACAGCGGAT...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACCGATGGTACCCCACTTaGTCTTCCTCCCAAGGATCC +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHRWYPT*SSSQGS
Trigger: GGATCCTTGGGAGGAAGACCAAGTGGGGTACCATCG...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CCA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACTGTTTTCAACTTCGATaGTACCCCACTTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANCFQLR*YPTWSS
Trigger: GGAAGACCAAGTGGGGTACCATCGAAGTTGAAAACA...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTGTTTTCAACTTCGATaGTACCCCACTTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: GSSAASPQPRGGRGLITDCFQLR*YPTWSS
Trigger: GGAAGACCAAGTGGGGTACCATCGAAGTTGAAAACA...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCTCTCCTCCATGCCGTTaGCCATGGCGCTGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSSPPCR*PWRCCP
Trigger: AGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGA...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTCATCTCCGGGGCTTCTaGCTCCTTCTCCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGHLRGF*LLLLHA
Trigger: GGCATGGAGGAGAAGGAGCCAGAAGCCCCGGAGATG...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAATGCAAGTGCGAGGCCTaGCCCCCACCCCAAGGCCTC +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGECKCEA*PPPQGL
Trigger: GAGGCCTTGGGGTGGGGGCCAGGCCTCGCACTTGCA...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 9 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000592951.5
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAACAGGGCCGATGGGGATaGAGGGGAGCGTGCAGCCCA +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEQGRWG*RGACSP
Trigger: TGGGCTGCACGCTCCCCTCCATCCCCATCGGCCCTG...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGGCTGCATTCTCCCCTaGGCTCTGACACACTCCAGG +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGGCILP*ALTHSR
Trigger: CCTGGAGTGTGTCAGAGCCCAGGGGAGAATGCAGCC...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGATGGCCACACCATGTaGCGGGCAGGGGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKDGHTM*RAGGPG
Trigger: ACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCTGGCTGGGCAGTCGGTaGCAGGGGACCCTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSWLGSR*QGTLEF
Trigger: AAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCA...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGGGGCTTGGAGTGGCTaGGCAGTCGGTGGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEGAWSG*AVGGRG
Trigger: TCCCCTGCCACCGACTGCCCAGCCACTCCAAGCCCC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGAGCTGCCAGGGGGCTTaGAGTGGCTGGGCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKSCQGA*SGWAVG
Trigger: ACCGACTGCCCAGCCACTCCAAGCCCCCTGGCAGCT...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAACCATGGGTCCCCTCGTaGGGACAGAGGGTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEPWVPS*GQRVRG
Trigger: GCCCCTCACCCTCTGTCCCCACGAGGGGACCCATGG...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATATGTGTGCACCTGAGTaGAGTCTCATCAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDMCAPE*SLIRPL
Trigger: GAGGGGCCTGATGAGACTCCACTCAGGTGCACACAT...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGAAGCATCTCAAGGCTaGGATGCTGCTGCCCACCCC +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGEASQG*DAAAHP
Trigger: GGGGTGGGCAGCAGCATCCCAGCCTTGAGATGCTTC...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCAGATCTTTTCAAGGCTaGGCCACTGGAGTCACCAAG +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLRSFQG*ATGVTK
Trigger: CTTGGTGACTCCAGTGGCCCAGCCTTGAAAAGATCT...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000427177.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR TCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGACACCTCGGCCCTCTTaGGCCCGAACCGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGETPRPS*ARTGTG
Trigger: GCCCGTCCCGGTTCGGGCTCAAGAGGGCCGAGGTGT...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR TCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCCACAGGGGCAGGCTCTaGATTCTCCAAGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSHRGRL*ILQGLG
Trigger: GCCCAGACCTTGGAGAATTCAGAGCCTGCCCCTGTG...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR TCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGGCCTTCTCGTTCCGTaGTGCAGGCGCCTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKGLLVP*CRRLLE
Trigger: CTCAAGCAGGCGCCTGCATCACGGAACGAGAAGGCC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGGGGATGCGCTCCTCTaGGGTGGGCTGCACCGACTT +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEGDALL*GGLHRL
Trigger: AAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAACCCTCTCCTCCAGGGTaGGTGTGTCCGCCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEPSPPG*VCPPWR
Trigger: TCGCCAAGGCGGACACACTCACCCTGGAGGAGAGGG...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGGATCCTCTTGCCGTTaGCCTGGTACTCGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGGSSCR*PGTRGH
Trigger: GTGACCACGAGTACCAGGTCAACGGCAAGAGGATCC...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATCAGTCTGCGGATGGCTaGGATAAAGGCACTTTCTGC +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDQSADG*DKGTFC
Trigger: GCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTG...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGGTGATGTGTGCACCTaGGTGGAGTCTCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGGDVCT*VESHQA
Trigger: GGCCTGATGAGACTCCACTCAGGTGCACACATCACC...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTACAGAGAAGGAAAGTaGAGCATCTCAAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLYREGK*SISRLG
Trigger: TCCCAGCCTTGAGATGCTTCACTTTCCTTCTCTGTA...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp ACCTCCTCGACCTCAAAAGATCTTTTCAAGGCTGGGCCACTGGAGTCACCAAGCCAATGGACAGCTCAGTaGGCCGGGACACCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: TSSTSKDLFKAGPLESPSQWTAQ*AGTPAR
Trigger: CCGAGCCGGTGTCCCGGCGCACTGAGCTGTCCATTG...GCTTGGTGACTCCAGTGGCCCAGCCTTGAAAAGATCTTTTGAGGTCGAGGAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS-3UTR GCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGCGTGATGCAGGCGCCTaGTTGAGCCCGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKRDAGA*LSPASL
Trigger: CAGAGATGCCGGGCTCAAGCAGGCGCCTGCATCACG...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTTCCGGCGCATCTaGTCCAGGATGGAGTCAATC +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGAFRRI*SRMESI
Trigger: GATTGACTCCATCCTGGAGCAGATGCGCCGGAAGGC...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGTTGAACTCGAAGCCCTaGTTCATGGCCTTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGLNSKP*FMAFRR
Trigger: GCGCCGGAAGGCCATGAAGCAGGGCTTCGAGTTCAA...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGTTGGACAGCAGGTCTaGGGTGATCCGCTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDVGQQV*GDPLFE
Trigger: TTCAAACAGCGGATCACCGCAGACCTGCTGTCCAAC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACGTTGGACAGCAGGTCTaGGGTGATCCGCTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHVGQQV*GDPLFE
Trigger: TTCAAACAGCGGATCACCGCAGACCTGCTGTCCAAC...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR GCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTTGATGTTCTGCATGTaGGTCCTGATGAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLLMFCM*VLMRRS
Trigger: GGACCTTCTCATCAGGACGCACATGCAGAACATCAA...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACATGTCCTTGATGTTCTaGATGTGCGTCCTGATGAGA +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHMSLMF*MCVLMR
Trigger: TCTCATCAGGACGCACATGCAGAACATCAAGGACAT...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGATGTCCTTGATGTTCTaGATGTGCGTCCTGATGAGA +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEMSLMF*MCVLMR
Trigger: TCTCATCAGGACGCACATGCAGAACATCAAGGACAT...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATATGTCCTTGATGTTCTaGATGTGCGTCCTGATGAGA +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHMSLMF*MCVLMR
Trigger: TCTCATCAGGACGCACATGCAGAACATCAAGGACAT...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATCACAGACGGATGATCTaGACACCGAAGCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDHRRMI*TPKLLF
Trigger: GAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTG...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGGATGGAGGGGAGCGTaGAGCCCACTGGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEGWRGA*SPLGSS
Trigger: AGAGGAGCCCAGTGGGCTGCACGCTCCCCTCCATCC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGGGGCCGGGCCGTGCTaGCACGAAACCTTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEGAGPC*HETLLF
Trigger: GAAGAGCAAGGTTTCGTGGCAGCACGGCCCGGCCCC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGAGTCAGACGCCCAGTaGCCCAACTTCCATGCACAC +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGESDAQ*PNFHAH
Trigger: GTGTGCATGGAAGTTGGGGCACTGGGCGTCTGACTC...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGCTCCCACACAGAGCCTaGTCTCTGCGTCCAGACAGT +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGLPHRA*SLRPDS
Trigger: ACTGTCTGGACGCAGAGAGCAGGCTCTGTGTGGGAG...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR GCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATTGGCTTGTCTGTCACTaGCAATGGTGGCCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDWLVCH*QWWPSR
Trigger: TCTGCTTGGCCACCATTGGCAGTGACAGACAAGCCA...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAACCCTGTACCCCAACGTaGCTGGGCAGGAGGAACGGC +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEPCTPT*LGRRNG
Trigger: GCCGTTCCTCCTGCCCAGCCACGTTGGGGTACAGGG...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS-3UTR CCA 90 bp TCTCGACCTCCTCGACCTCAAAAGATCTTTTCAAGGCTGGGCCACTGGAGTCACCTGGACCCTCCGGGGTaGGGTGGAGTTGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: SRPPRPQKIFSRLGHWSHLDPPG*GGVGCL
Trigger: GAGACACCCAACTCCACCCCACCCCGGAGGGTCCAG...GTGACTCCAGTGGCCCAGCCTTGAAAAGATCTTTTGAGGTCGAGGAGGTCGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGTGGACGAGATGTCAATaGACAGCTCAGTGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGWTRCQ*TAQCAG
Trigger: CCCGGCGCACTGAGCTGTCCATTGACATCTCGTCCA...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGACCGGGACGGGCCGATaGCCCCGGCGTTCTCCACCT +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGETGTGR*PRRSPP
Trigger: AGGTGGAGAACGCCGGGGCCATCGGCCCGTCCCGGT...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAACCGAGGGGCCGGTTCTaGCGTCTTGTGGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEPRGRF*RLVAQH
Trigger: GTGTTGGGCCACAAGACGCCAGAACCGGCCCCTCGG...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGCGGTGGCAGGGGCAGTaGGCACCTCGGGGACCTTGG +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGERWQGQ*APRGPW
Trigger: CCAAGGTCCCCGAGGTGCCCACTGCCCCTGCCACCG...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGGATCTCCACCCTCTTaGGGGCTGCGTCGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEGSPPS*GLRRWQ
Trigger: CTGCCACCGACGCAGCCCCCAAGAGGGTGGAGATCC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAATGTCGCCAACGCAGCTaGGAGCCGCCTCAGTGGCCT +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGECRQRS*EPPQWP
Trigger: AGGCCACTGAGGCGGCTCCCAGCTGCGTTGGCGACA...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591198.5
CDS-3UTR CCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACTTCTCGTTGTTGATGTaGTCCCCGAACCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHFSLLM*SPNPGV
Trigger: CACACCAGGGTTCGGGGACCACATCAACAACGAGAA...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACGCCCACCACAGCAAATaGGATCATCTCCCGGAACTT +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHAHHSK*DHLPEL
Trigger: AAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGC...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCTGTTTTCAACTTCGATaGTACCCCACTTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLCFQLR*YPTWSS
Trigger: GGAAGACCAAGTGGGGTACCATCGAAGTTGAAAACA...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGTGTTTTCAACTTCGATaGTACCCCACTTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSECFQLR*YPTWSS
Trigger: GGAAGACCAAGTGGGGTACCATCGAAGTTGAAAACA...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTTGTTTTCAACTTCGATaGTACCCCACTTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITCFQLR*YPTWSS
Trigger: GGAAGACCAAGTGGGGTACCATCGAAGTTGAAAACA...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCCATCTCCGGGGCTTCTaGCTCCTTCTCCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSHLRGF*LLLLHA
Trigger: GGCATGGAGGAGAAGGAGCCAGAAGCCCCGGAGATG...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGATGGCCACACCATGTaGCGGGCAGGGGGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEDGHTM*RAGGPG
Trigger: ACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAAGCTGCCAGGGGGCTTaGAGTGGCTGGGCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGESCQGA*SGWAVG
Trigger: ACCGACTGCCCAGCCACTCCAAGCCCCCTGGCAGCT...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGACACACACACTTCCCTaGTCACTTGGGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGTHTLP*SLGQGR
Trigger: CCTGCCCTGCCCAAGTGACCAGGGAAGTGTGTGTGT...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGCCTTCCTCTCTTGGGTaGGGAGGGAGTCAGACGCCC +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKPSSLG*GGSQTP
Trigger: GGGCGTCTGACTCCCTCCCCACCCAAGAGAGGAAGG...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGACATGGCCTGGGCCCTaGCGCTGGCCACTCATTTCC +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKTWPGP*RWPLIS
Trigger: GGAAATGAGTGGCCAGCGCCAGGGCCCAGGCCATGT...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGACACTCAGGGCAGAGTaGCCATCCAGGGTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGTLRAE*PSRVPL
Trigger: GAGAGGAACCCTGGATGGCCACTCTGCCCTGAGTGT...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACATCAAAGGGGCTTTGTaGTCGCGGAACAAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHIKGAL*SRNKEP
Trigger: AGGCTCCTTGTTCCGCGACCACAAAGCCCCTTTGAT...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTTCCCAAAGCCCAGGTaGTATCGATGCTCTGTGTTA +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLFPKPR*YRCSVL
Trigger: TAACACAGAGCATCGATACCACCTGGGCTTTGGGAA...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592951.5
CDS-3UTR TCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCACAGAGTCAAATTCCTaGCGACTTCCAAAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLTESNS*RLPKSF
Trigger: GAAAGACTTTGGAAGTCGTCAGGAATTTGACTCTGT...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS-3UTR TCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCACATTTCCATGTGCTaGTCATATGTTTGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHHISMC*SYVCAP
Trigger: TGGAGCACAAACATATGATCAGCACATGGAAATGTG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS-3UTR TCA 90 bp TGGTCATTGATGAACTTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTGGACACCTCGGCCCTCTTaGGCCCGAACCGGGACGGGC +
Preference number: 4 (lower is better)
Translates to: WSLMNFMMGCQQFSLLMWTPRPS*ARTGTG
Trigger: GCCCGTCCCGGTTCGGGCTCAAGAGGGCCGAGGTGT...CCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS-3UTR TCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGGCCTTCTCGTTCCGTaGTGCAGGCGCCTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEGLLVP*CRRLLE
Trigger: CTCAAGCAGGCGCCTGCATCACGGAACGAGAAGGCC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGAGCAGTTCTCGTTGTTaGTGTGGTCCCCGAACCCTG +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGSSSRC*CGPRTL
Trigger: CAGGGTTCGGGGACCACATCAACAACGAGAACTGCT...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAACAAGGCCTCCGGCACTaGGAACCCCACACAGACGGA +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEQGLRH*EPHTDG
Trigger: TCCGTCTGTGTGGGGTTCTCAGTGCCGGAGGCCTTG...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGGCAGGGGTAGGGGCTaGGTGATGGCCACACCATGT +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEGRGRG*VMATPC
Trigger: ACATGGTGTGGCCATCACTCAGCCCCTACCCCTGCC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGTACACTCCTTCTCGCTaGCCTTCTCCTGGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGYTPSR*PSPGCK
Trigger: CTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTA...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTTACACTCCTTCTCGCTaGCCTTCTCCTGGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGYTPSR*PSPGCK
Trigger: CTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTA...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATCGCCCCGAGGCTTGCTaGTCCTTTTTAATATCCACT +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDRPEAC*SFLIST
Trigger: AGTGGATATTAAAAAGGAGCAGCAAGCCTCGGGGCG...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS-3UTR GCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCTCCTCTGAGGTGGGCTaGACCGACTTCCGGCTGATT +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSSSEVG*TDFRLI
Trigger: AATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGA...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGGGGGTACACGTCGATaGCGTTGGACAGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKGGTRR*RWTAGL
Trigger: CAGACCTGCTGTCCAACGGCATCGACGTGTACCCCC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCATGTCCTTGATGTTCTaGATGTGCGTCCTGATGAGA +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLMSLMF*MCVLMR
Trigger: TCTCATCAGGACGCACATGCAGAACATCAAGGACAT...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAATGCCTGTGGCTCCAGTaGAGCCTCCCCACAACCTCG +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGECLWLQ*SLPTTS
Trigger: CGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGGCA...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCATCCACCAGACTCACTTaGTTAGACCTTTTCAAAACT +
Preference number: 4 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSSTRLT*LDLFKT
Trigger: AGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGA...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCTACAGCTGGTGCCCTTaGCCCGGCGAAGACTTCCTT +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSYSWCP*PGEDFL
Trigger: AAGGAAGTCTTCGCCGGGGCAAGGGCACCAGCTGTA...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR GCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGCGACTTGAGTTCCTaGCAGAGACAGCAGGCAGCC +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSSDLSS*QRQQAA
Trigger: GGCTGCCTGCTGTCTCTGGCAGGAACTCAAGTCGCT...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTTTCACGCCCAGGTCCTaGAATTTCTGGGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGFTPRS*NFWVEL
Trigger: CAGCTCCACCCAGAAATTCCAGGACCTGGGCGTGAA...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGCTTAGGGAGTCCACATaGCGGGCCGAGGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKLREST*RAEGSE
Trigger: CTCAGAACCCTCGGCCCGCCATGTGGACTCCCTAAG...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCCGGTGGGCTGACTCCTaGGGTTTGACGATGGTGATC +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSRWADS*GLTMVI
Trigger: GATCACCATCGTCAAACCCCAGGAGTCAGCCCACCG...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGGCTCCATCCTCCGGTaGGCTGACTCCTGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEGSILR*ADSWGL
Trigger: CAAACCCCAGGAGTCAGCCCACCGGAGGATGGAGCC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGCAGGCTTGGGCATCTaGATCTCCACCCTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKAGLGI*ISTLLG
Trigger: CCCCAAGAGGGTGGAGATCCAGATGCCCAAGCCTGC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCATCTGCTCCAGGATaGAGTCAATCCCCACGTAGC +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGASAPG*SQSPRS
Trigger: GCTACGTGGGGATTGACTCCATCCTGGAGCAGATGC...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGTGGTCCCCGAACCCTaGTGTGTCAATCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGVVPEP*CVNHCQ
Trigger: CTGACAGTGATTGACACACCAGGGTTCGGGGACCAC...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGATCCGCTGTTTGAAGTaGACCCTCTCCTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGIRCLK*TLSSRV
Trigger: CACCCTGGAGGAGAGGGTCCACTTCAAACAGCGGAT...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTATCCGCTGTTTGAAGTaGACCCTCTCCTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGIRCLK*TLSSRV
Trigger: CACCCTGGAGGAGAGGGTCCACTTCAAACAGCGGAT...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTCGATGGTACCCCACTTaGTCTTCCTCCCAAGGATCC +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGRWYPT*SSSQGS
Trigger: GGATCCTTGGGAGGAAGACCAAGTGGGGTACCATCG...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTGTTTTCAACTTCGATaGTACCCCACTTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLCFQLR*YPTWSS
Trigger: GGAAGACCAAGTGGGGTACCATCGAAGTTGAAAACA...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGGGACGGAAATGACTTaGGGGCAGGATCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEGTEMT*GQDPGG
Trigger: ACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGGTGGCAGGGGACCCTaGAGTTTTCTACCCTTAGGA +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGGGRGP*SFLPLG
Trigger: TCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACC...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGGTGGCAGGGGACCCTaGAGTTTTCTACCCTTAGGA +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGGGRGP*SFLPLG
Trigger: TCCTAAGGGTAGAAAACTCCAGGGTCCCCTGCCACC...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAATGGCTGGGCAGTCGGTaGCAGGGGACCCTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEWLGSR*QGTLEF
Trigger: AAACTCCAGGGTCCCCTGCCACCGACTGCCCAGCCA...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCACACACACACTTCCCTaGTCACTTGGGCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSTHTLP*SLGQGR
Trigger: CCTGCCCTGCCCAAGTGACCAGGGAAGTGTGTGTGT...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATAGCAGGAAGGGACTTTaGTCATCTGTGCCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDSRKGL*SSVPCK
Trigger: TTTGCAGGGCACAGATGACCAAAGTCCCTTCCTGCT...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGATGTGTGCACCTGAGTaGAGTCTCATCAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGMCAPE*SLIRPL
Trigger: GAGGGGCCTGATGAGACTCCACTCAGGTGCACACAT...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGAAGCATCTCAAGGCTaGGATGCTGCTGCCCACCCC +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKEASQG*DAAAHP
Trigger: GGGGTGGGCAGCAGCATCCCAGCCTTGAGATGCTTC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGCTGCTGGCTGCTGCTaGCCAGAAGGCTCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEAAGCC*PEGSPS
Trigger: GGAAGGAGAGCCTTCTGGCCAGCAGCAGCCAGCAGC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427674.6
CDS-3UTR CCA 90 bp TGGTCATTGATGAACTTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTGGACCGGGACGGGCCGATaGCCCCGGCGTTCTCCACAG +
Preference number: 4 (lower is better)
Translates to: WSLMNFMMGCQQFSLLMWTGTGR*PRRSPQ
Trigger: CTGTGGAGAACGCCGGGGCCATCGGCCCGTCCCGGT...CCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS-3UTR CCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACATCTCGTCTCTTCGATaGTACCCCACTTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHISSLR*YPTWSS
Trigger: GGAAGACCAAGTGGGGTACCATCGAAGAGACGAGAT...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR TCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGGATCCTCTTGCCGTTaGCCTGGTACTCGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKGSSCR*PGTRGH
Trigger: GTGACCACGAGTACCAGGTCAACGGCAAGAGGATCC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAACCCCACACAGACGGATaGTCTGCACACCGAAGCTGC +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEPHTDG*SAHRSC
Trigger: GCAGCTTCGGTGTGCAGATCATCCGTCTGTGTGGGG...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGGGGTAGGGGCTGAGTaGTGGCCACACCATGTGGCG +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEGVGAE*WPHHVA
Trigger: CGCCACATGGTGTGGCCATCACTCAGCCCCTACCCC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGGTGATGTGTGCACCTaGGTGGAGTCTCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKGDVCT*VESHQA
Trigger: GGCCTGATGAGACTCCACTCAGGTGCACACATCACC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGTTGAACTCGAAGCCCTaGTTCATGGCCTTCCGGCGC +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKLNSKP*FMAFRR
Trigger: GCGCCGGAAGGCCATGAAGCAGGGCTTCGAGTTCAA...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGTCCTCTGAGGTGGGCTaGACCGACTTCCGGCTGATT +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKSSEVG*TDFRLI
Trigger: AATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGA...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGGGGGTACACGTCGATaGCGTTGGACAGCAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEGGTRR*RWTAGL
Trigger: CAGACCTGCTGTCCAACGGCATCGACGTGTACCCCC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGGGTGCTCTCACCCCTaGCTGTGGCTCCAGTGCAGC +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEGCSHP*LWLQCS
Trigger: GCTGCACTGGAGCCACAGGCAGGGGTGAGAGCACCC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATTCCACCAGACTCACTTaGTTAGACCTTTTCAAAACT +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHSTRLT*LDLFKT
Trigger: AGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGA...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGTCCACCAGACTCACTTaGTTAGACCTTTTCAAAACT +
Preference number: 4 (lower is better)
Translates to: QPPHNLGEAAASSLTHSESTRLT*LDLFKT
Trigger: AGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGA...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGTGGTCATCTGTGCCCTaGAAAGACAGCCCCCATGGG +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKWSSVP*KDSPHG
Trigger: CCCATGGGGGCTGTCTTTGCAGGGCACAGATGACCA...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGAGTCAGACGCCCAGTaGCCCAACTTCCATGCACAC +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKESDAQ*PNFHAH
Trigger: GTGTGCATGGAAGTTGGGGCACTGGGCGTCTGACTC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAAAGACTTCTTCATGGTaGCTCCGTGGCCGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEKTSSW*LRGRRS
Trigger: GGAGCGGCGGCCACGGAGGCACCATGAAGAAGTCTT...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000427177.6
ENST00000591198.5
CDS-3UTR GCA 90 bp GACCTCCTCGACCTCAAAAGATCTTTTCAAGGCTGGGCCACTGGAGTCACCAAGAAGACTTCTTCATGGTaGCTCCGTGGCCGCCGCTCC +
Preference number: 4 (lower is better)
Translates to: DLLDLKRSFQGWATGVTKKTSSW*LRGRRS
Trigger: GGAGCGGCGGCCACGGAGGCACCATGAAGAAGTCTT...CTTGGTGACTCCAGTGGCCCAGCCTTGAAAAGATCTTTTGAGGTCGAGGAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS-3UTR GCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGGCTCTCCTTCCTCTTaGAATCCAATTCCTACTCTC +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDGSPSS*NPIPTL
Trigger: GAGAGTAGGAATTGGATTGCAAGAGGAAGGAGAGCC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427674.6
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCTTAACTTAGACTCTTaGAAACCAACTCACAGAGTC +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITLNLDS*KPTHRV
Trigger: GACTCTGTGAGTTGGTTTCCAAGAGTCTAAGTTAAG...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCTTCACGCCCAGGTCCTaGAATTTCTGGGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSFTPRS*NFWVEL
Trigger: CAGCTCCACCCAGAAATTCCAGGACCTGGGCGTGAA...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAACTTAGGGAGTCCACATaGCGGGCCGAGGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGELREST*RAEGSE
Trigger: CTCAGAACCCTCGGCCCGCCATGTGGACTCCCTAAG...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGTCCGCAGGGACGCCTTaGGGGAGCGTTGGCTTAGGG +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGESAGTP*GSVGLG
Trigger: CCCTAAGCCAACGCTCCCCCAAGGCGTCCCTGCGGA...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGTGGACGAGATGTCAATaGACAGCTCAGTGCGCCGGG +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKWTRCQ*TAQCAG
Trigger: CCCGGCGCACTGAGCTGTCCATTGACATCTCGTCCA...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGCCGAGGGGCCGGTTCTaGCGTCTTGTGGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEPRGRF*RLVAQH
Trigger: GTGTTGGGCCACAAGACGCCAGAACCGGCCCCTCGG...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGCCTCAGTGGCCTCCTaGCTCCGGGGTGTAGCCTCA +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEASVAS*LRGVAS
Trigger: TGAGGCTACACCCCGGAGCCAGGAGGCCACTGAGGC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAACGAAGCCCTGCTTCATaGCCTTCCGGCGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGERSPAS*PSGASA
Trigger: AGCAGATGCGCCGGAAGGCCATGAAGCAGGGCTTCG...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGTGCGCTCCTCTGAGGTaGGCTGCACCGACTTCCGGC +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGECAPLR*AAPTSG
Trigger: GCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCA...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGTTCTCGTTGTTGATGTaGTCCCCGAACCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGFSLLM*SPNPGV
Trigger: CACACCAGGGTTCGGGGACCACATCAACAACGAGAA...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCCACCACAGCAAATaGGATCATCTCCCGGAACTT +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGAHHSK*DHLPEL
Trigger: AAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGC...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGCTCTTGCCGTTGACCTaGTACTCGTGGTCACTGCCC +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKLLPLT*YSWSLP
Trigger: GGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAG...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCCGATGGTACCCCACTTaGTCTTCCTCCCAAGGATCC +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSRWYPT*SSSQGS
Trigger: GGATCCTTGGGAGGAAGACCAAGTGGGGTACCATCG...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAACATCTCCGGGGCTTCTaGCTCCTTCTCCTCCATGCC +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEHLRGF*LLLLHA
Trigger: GGCATGGAGGAGAAGGAGCCAGAAGCCCCGGAGATG...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAATCAAGGCTGGGCCACTaGAGTCACCAAGCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGESRLGH*SHQASG
Trigger: TCCGGAGGCTTGGTGACTCCAGTGGCCCAGCCTTGA...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000427177.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CGACCTCCTCGACCTCAAAAGATCTTTTCAAGGCTGGGCCACTGGAGTCACCAATCAAGGCTGGGCCACTaGAGTCACCAAGCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: RPPRPQKIFSRLGHWSHQSRLGH*SHQASG
Trigger: TCCGGAGGCTTGGTGACTCCAGTGGCCCAGCCTTGA...TTGGTGACTCCAGTGGCCCAGCCTTGAAAAGATCTTTTGAGGTCGAGGAGGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGTGGGAGCCGCCTCAGTaGCTTGTCTGTCACTGCCAA +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKWEPPQ*LVCHCQ
Trigger: TTGGCAGTGACAGACAAGCCACTGAGGCGGCTCCCA...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR CCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACATTATCTTACGAAAATaGGGCGTAGACGCTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHIILRK*GVDAGH
Trigger: GTGCCCAGCGTCTACGCCCCATTTTCGTAAGATAAT...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR TCA 90 bp TGGTCATTGATGAACTTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTGGGGGGATGCGCTCCTCTaGGGTGGGCTGCACCGACTT +
Preference number: 4 (lower is better)
Translates to: WSLMNFMMGCQQFSLLMWGDALL*GGLHRL
Trigger: AAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCC...CCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS-3UTR TCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGGATCCTCTTGCCGTTaGCCTGGTACTCGTGGTCAC +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEGSSCR*PGTRGH
Trigger: GTGACCACGAGTACCAGGTCAACGGCAAGAGGATCC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGGCAGGGGTAGGGGCTaGGTGATGGCCACACCATGT +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEGRGRG*VMATPC
Trigger: ACATGGTGTGGCCATCACTCAGCCCCTACCCCTGCC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCCAGTCTGCGGATGGCTaGGATAAAGGCACTTTCTGC +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSQSADG*DKGTFC
Trigger: GCAGAAAGTGCCTTTATCTCAGCCATCCGCAGACTG...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGCACCAGTGGGGGTGGTaGGGGGTCCTTCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEHQWGW*GVLPLL
Trigger: CAAGAGAGGAAGGACCCCTCACCACCCCCACTGGTG...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGCTCCTGGACAGAGACTaGAGCCACATCCCCATTGAG +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKLLDRD*SHIPIE
Trigger: CTCAATGGGGATGTGGCTTCAGTCTCTGTCCAGGAG...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000449803.6
CDS-3UTR TCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCAGATCTTTTCAAGGCTaGGTAAGACTTCTTCATGGT +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLRSFQG*VRLLHG
Trigger: ACCATGAAGAAGTCTTACTCAGCCTTGAAAAGATCT...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591198.5
CDS-3UTR GCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCATTTCTTCAATCTGTTaGAATCACGAATGCATCCGA +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLISSIC*NHECIR
Trigger: TCGGATGCATTCGTGATTGCAACAGATTGAAGAAAT...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS-3UTR GCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGCGTGATGCAGGCGCCTaGTTGAGCCCGGCATCTCTG +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGERDAGA*LSPASL
Trigger: CAGAGATGCCGGGCTCAAGCAGGCGCCTGCATCACG...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGCCTTCCGGCGCATCTaGTCCAGGATGGAGTCAATC +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEAFRRI*SRMESI
Trigger: GATTGACTCCATCCTGGAGCAGATGCGCCGGAAGGC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAATCCTCTGAGGTGGGCTaGACCGACTTCCGGCTGATT +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGESSEVG*TDFRLI
Trigger: AATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGA...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATATGTCCTTGATGTTCTaGATGTGCGTCCTGATGAGA +
Preference number: 4 (lower is better)
Translates to: TFSWLQAASPVPADAPGDMSLMF*MCVLMR
Trigger: TCTCATCAGGACGCACATGCAGAACATCAAGGACAT...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGTGTCAATTCAGTGGGTaGTCTCACCCCTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKCQFSG*SHPCLW
Trigger: CCACAGGCAGGGGTGAGAGCACCCACTGAATTGACA...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGTGCTCCTGGTGGGCTaGATTCTCCCCTGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEVLLVG*ILPWAL
Trigger: CAGAGCCCAGGGGAGAATGCAGCCCACCAGGAGCAC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGATAAAGGCACTTTCTaGTCCAGGAGGGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKDKGTF*SRRGSC
Trigger: GCAGCTGCCCCTCCTGGAGCAGAAAGTGCCTTTATC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAATGGTCATCTGTGCCCTaGAAAGACAGCCCCCATGGG +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEWSSVP*KDSPHG
Trigger: CCCATGGGGGCTGTCTTTGCAGGGCACAGATGACCA...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGTGTCCGGCCAGGGCTaGTCCCTCCTCCTCTCCTAT +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEVSGQG*SLLLSY
Trigger: ATAGGAGAGGAGGAGGGAGCAGCCCTGGCCGGACAC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR CCA 90 bp TGGTCATTGATGAACTTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTGGGTACCCCAACGTGGCTaGGCAGGAGGAACGGCCGTG +
Preference number: 4 (lower is better)
Translates to: WSLMNFMMGCQQFSLLMWVPQRG*AGGTAV
Trigger: CACGGCCGTTCCTCCTGCCCAGCCACGTTGGGGTAC...CCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS-3UTR CCA 90 bp TGGTCATTGATGAACTTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTGGCCCTGTACCCCAACGTaGCTGGGCAGGAGGAACGGC +
Preference number: 4 (lower is better)
Translates to: WSLMNFMMGCQQFSLLMWPCTPT*LGRRNG
Trigger: GCCGTTCCTCCTGCCCAGCCACGTTGGGGTACAGGG...CCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTCGTTCTCCACCTGCTTaGACGAGATGTCAATGGACA +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGRSPPA*TRCQWT
Trigger: TGTCCATTGACATCTCGTCCAAGCAGGTGGAGAACG...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp TGGTCATTGATGAACTTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTGGCCGAGGGGCCGGTTCTaGCGTCTTGTGGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: WSLMNFMMGCQQFSLLMWPRGRF*RLVAQH
Trigger: GTGTTGGGCCACAAGACGCCAGAACCGGCCCCTCGG...CCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGGCTCCATCCTCCGGTaGGCTGACTCCTGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEGSILR*ADSWGL
Trigger: CAAACCCCAGGAGTCAGCCCACCGGAGGATGGAGCC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGCGCCTCAGCAGGCTTaGGCATCTGGATCTCCACCC +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEAPQQA*ASGSPP
Trigger: GGGTGGAGATCCAGATGCCCAAGCCTGCTGAGGCGC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp TGGTCATTGATGAACTTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTGGTGCGCTCCTCTGAGGTaGGCTGCACCGACTTCCGGC +
Preference number: 4 (lower is better)
Translates to: WSLMNFMMGCQQFSLLMWCAPLR*AAPTSG
Trigger: GCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCA...CCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS-3UTR CCA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCAGGTATTTCTCGTACTaGTCATTGATGAACTTCATG +
Preference number: 4 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLRYFSY*SLMNFM
Trigger: CATGAAGTTCATCAATGACCAGTACGAGAAATACCT...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATAGGTATTTCTCGTACTaGTCATTGATGAACTTCATG +
Preference number: 4 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHRYFSY*SLMNFM
Trigger: CATGAAGTTCATCAATGACCAGTACGAGAAATACCT...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACAGGTATTTCTCGTACTaGTCATTGATGAACTTCATG +
Preference number: 4 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHRYFSY*SLMNFM
Trigger: CATGAAGTTCATCAATGACCAGTACGAGAAATACCT...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTAGGTATTTCTCGTACTaGTCATTGATGAACTTCATG +
Preference number: 4 (lower is better)
Translates to: CGSSAASPQPRGGRGLITRYFSY*SLMNFM
Trigger: CATGAAGTTCATCAATGACCAGTACGAGAAATACCT...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCGCCCACCACAGCAAATaGGATCATCTCCCGGAACTT +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSAHHSK*DHLPEL
Trigger: AAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGC...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAACTCTTGCCGTTGACCTaGTACTCGTGGTCACTGCCC +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGELLPLT*YSWSLP
Trigger: GGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAG...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGCGATGGTACCCCACTTaGTCTTCCTCCCAAGGATCC +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKRWYPT*SSSQGS
Trigger: GGATCCTTGGGAGGAAGACCAAGTGGGGTACCATCG...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAACGGTACGCCTCGAAGTaGATGCTGCTGGTGATGTCC +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGERYASK*MLLVMS
Trigger: GGACATCACCAGCAGCATCCACTTCGAGGCGTACCG...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGGGACGGAAATGACTTaGGGGCAGGATCCCGGGGGT +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEGTEMT*GQDPGG
Trigger: ACCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGAGCGTGCAGCCCACTaGGCTCCTCTGCAAGTGCGA +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEERAAH*APLQVR
Trigger: TCGCACTTGCAGAGGAGCCCAGTGGGCTGCACGCTC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGGCGTGAGAGGGGGATaGCAGGGAGATGAAGACGCC +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEGVRGG*QGDEDA
Trigger: GGCGTCTTCATCTCCCTGCCATCCCCCTCTCACGCC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGATGTGTGCACCTGAGTaGAGTCTCATCAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKMCAPE*SLIRPL
Trigger: GAGGGGCCTGATGAGACTCCACTCAGGTGCACACAT...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGCCTTCCTCTCTTGGGTaGGGAGGGAGTCAGACGCCC +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEPSSLG*GGSQTP
Trigger: GGGCGTCTGACTCCCTCCCCACCCAAGAGAGGAAGG...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGACATGGCCTGGGCCCTaGCGCTGGCCACTCATTTCC +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGETWPGP*RWPLIS
Trigger: GGAAATGAGTGGCCAGCGCCAGGGCCCAGGCCATGT...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGTCCAGATGCTTCCCGTaGACCAGCTGCACTCCCGGC +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGESRCFP*TSCTPG
Trigger: GCCGGGAGTGCAGCTGGTCCACGGGAAGCATCTGGA...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000427674.6
CDS-3UTR CCA 90 bp TGGTCATTGATGAACTTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTGGCACCGACTTCCGGCTTaGAGGCAGGGGGCTCCATCC +
Preference number: 4 (lower is better)
Translates to: WSLMNFMMGCQQFSLLMWHRLPA*RQGAPS
Trigger: GGATGGAGCCCCCTGCCTCCAAGCCGGAAGTCGGTG...CCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS-3UTR TCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGCATCCTCCGGTGGGCTaGCTCCTGGGGTTTGACGAT +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEHPPVG*LLGFDD
Trigger: ATCGTCAAACCCCAGGAGTCAGCCCACCGGAGGATG...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR TCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGCACAGGGGCAGGCTCTaGATTCTCCAAGGTCTGGGC +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEHRGRL*ILQGLG
Trigger: GCCCAGACCTTGGAGAATTCAGAGCCTGCCCCTGTG...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR TCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAAGCAGTTCTCGTTGTTaGTGTGGTCCCCGAACCCTG +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGESSSRC*CGPRTL
Trigger: CAGGGTTCGGGGACCACATCAACAACGAGAACTGCT...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGGGATGGCAGGGAGATaGAGACGCCTCCCTCATTCC +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEGMAGR*RRLPHS
Trigger: GGAATGAGGGAGGCGTCTTCATCTCCCTGCCATCCC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGTGGACTGTGCACCCCTaGCGCCCGTTCTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEWTVHP*RPFSPF
Trigger: GAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCA...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTTACAGAGAAGGAAAGTaGAGCATCTCAAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGYREGK*SISRLG
Trigger: TCCCAGCCTTGAGATGCTTCACTTTCCTTCTCTGTA...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp AAAAGATCTTTTCAAGGCTGGGCCACTGGAGTCACCAAGCCTCCGGAGCCGGCCGAGAGAAGCAAGATTTaGAATGCACGGGTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: KRSFQGWATGVTKPPEPAERSKI*NARVQK
Trigger: CTTCTGGACCCGTGCATTTCAAATCTTGCTTCTCTC...GGCCGGCTCCGGAGGCTTGGTGACTCCAGTGGCCCAGCCTTGAAAAGATCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS-3UTR TCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACTGCAAGTGTCTCTTGTaGTTCCTTTGTTATCCCCAT +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHCKCLL*FLCYPH
Trigger: ATGGGGATAACAAAGGAATCACAAGAGACACTTGCA...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR GCA 90 bp TGGTCATTGATGAACTTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTGGAGCCCAGTTCCTGCGTaGCTGCCTCGCCTTCCTCTG +
Preference number: 4 (lower is better)
Translates to: WSLMNFMMGCQQFSLLMWSPVPA*LPRLPL
Trigger: CAGAGGAAGGCGAGGCAGGCACGCAGGAACTGGGCT...CCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS-3UTR GCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGTTGGACAGCAGGTCTaGGGTGATCCGCTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKVGQQV*GDPLFE
Trigger: TTCAAACAGCGGATCACCGCAGACCTGCTGTCCAAC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTTTGATGTTCTGCATGTaGGTCCTGATGAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGLMFCM*VLMRRS
Trigger: GGACCTTCTCATCAGGACGCACATGCAGAACATCAA...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAATGTCAATTCAGTGGGTaGTCTCACCCCTGCCTGTGG +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGECQFSG*SHPCLW
Trigger: CCACAGGCAGGGGTGAGAGCACCCACTGAATTGACA...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGTCTGCACACCGAAGCTaGTCTTCTGAGCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGESAHRS*SSEPSG
Trigger: CCCCGAGGGCTCAGAAGAGCAGCTTCGGTGTGCAGA...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGCACAGACGGATGATCTaGACACCGAAGCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKHRRMI*TPKLLF
Trigger: GAAGAGCAGCTTCGGTGTGCAGATCATCCGTCTGTG...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGATAAAGGCACTTTCTaGTCCAGGAGGGGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEDKGTF*SRRGSC
Trigger: GCAGCTGCCCCTCCTGGAGCAGAAAGTGCCTTTATC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGACTTTGGTCATCTGTaGCCTGCAAAGACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEDFGHL*PAKTAP
Trigger: GGGGGCTGTCTTTGCAGGGCACAGATGACCAAAGTC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGCTTTCTGGCCCTCCGTaGCCCCTAACCCAGCACTTC +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGELSGPP*PLTQHF
Trigger: GAAGTGCTGGGTTAGGGGGCACGGAGGGCCAGAAAG...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGCTTAGGGAGTCCACATaGCGGGCCGAGGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGELREST*RAEGSE
Trigger: CTCAGAACCCTCGGCCCGCCATGTGGACTCCCTAAG...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp TGGTCATTGATGAACTTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTGGGGTTCTGGCGTCTTGTaGCCCAACACCTCGGCCCTC +
Preference number: 4 (lower is better)
Translates to: WSLMNFMMGCQQFSLLMWGSGVL*PNTSAL
Trigger: GAGGGCCGAGGTGTTGGGCCACAAGACGCCAGAACC...CCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS-3UTR CCA 90 bp TGGTCATTGATGAACTTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTGGGGCTCCATCCTCCGGTaGGCTGACTCCTGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: WSLMNFMMGCQQFSLLMWGSILR*ADSWGL
Trigger: CAAACCCCAGGAGTCAGCCCACCGGAGGATGGAGCC...CCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGCAGGCTTGGGCATCTaGATCTCCACCCTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEAGLGI*ISTLLG
Trigger: CCCCAAGAGGGTGGAGATCCAGATGCCCAAGCCTGC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGCATCTGCTCCAGGATaGAGTCAATCCCCACGTAGC +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEASAPG*SQSPRS
Trigger: GCTACGTGGGGATTGACTCCATCCTGGAGCAGATGC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGCGAAGCCCTGCTTCATaGCCTTCCGGCGCATCTGCT +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGERSPAS*PSGASA
Trigger: AGCAGATGCGCCGGAAGGCCATGAAGCAGGGCTTCG...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCAGGTATTTCTCGTACTaGTCATTGATGAACTTCATG +
Preference number: 4 (lower is better)
Translates to: SAASPQPRGGRGLITDSLRYFSY*SLMNFM
Trigger: CATGAAGTTCATCAATGACCAGTACGAGAAATACCT...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAATCCGCTGTTTGAAGTaGACCCTCTCCTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEIRCLK*TLSSRV
Trigger: CACCCTGGAGGAGAGGGTCCACTTCAAACAGCGGAT...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAACGATGGTACCCCACTTaGTCTTCCTCCCAAGGATCC +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGERWYPT*SSSQGS
Trigger: GGATCCTTGGGAGGAAGACCAAGTGGGGTACCATCG...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAACCTTCCCTTGTTTCCTaGCAGCATGTCGAAGGGGTG +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEPSLVS*QHVEGV
Trigger: CACCCCTTCGACATGCTGCCAGGAAACAAGGGAAGG...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGTCATGTCAATTCAGTaGGTGCTCTCACCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKVMSIQ*VLSPLP
Trigger: AGGCAGGGGTGAGAGCACCCACTGAATTGACATGAC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGCAGGAAGGGACTTTaGTCATCTGTGCCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSSRKGL*SSVPCK
Trigger: TTTGCAGGGCACAGATGACCAAAGTCCCTTCCTGCT...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGAAGCATCTCAAGGCTaGGATGCTGCTGCCCACCCC +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEEASQG*DAAAHP
Trigger: GGGGTGGGCAGCAGCATCCCAGCCTTGAGATGCTTC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGTCAAGGCTGGGCCACTaGAGTCACCAAGCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGESRLGH*SHQASG
Trigger: TCCGGAGGCTTGGTGACTCCAGTGGCCCAGCCTTGA...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000427177.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGCCAAAGGGGACTTTCTaGCCCTCCGTGCCCCCTAAC +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEPKGTF*PSVPPN
Trigger: GTTAGGGGGCACGGAGGGCCAGAAAGTCCCCTTTGG...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000431235.6
ENST00000449803.6
CDS-3UTR TCA 90 bp TGGTCATTGATGAACTTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTGGCATCCTCCGGTGGGCTaGCTCCTGGGGTTTGACGAT +
Preference number: 4 (lower is better)
Translates to: WSLMNFMMGCQQFSLLMWHPPVG*LLGFDD
Trigger: ATCGTCAAACCCCAGGAGTCAGCCCACCGGAGGATG...CCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS-3UTR GCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGTTGGACAGCAGGTCTaGGGTGATCCGCTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEVGQQV*GDPLFE
Trigger: TTCAAACAGCGGATCACCGCAGACCTGCTGTCCAAC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGCTGCCACGAAACCTTaGTCTTCAGCTGTGGACTGT +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEAATKP*SSAVDC
Trigger: ACAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGTGGTCATCTGTGCCCTaGAAAGACAGCCCCCATGGG +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEWSSVP*KDSPHG
Trigger: CCCATGGGGGCTGTCTTTGCAGGGCACAGATGACCA...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCAGTCTCCTTACTTTaGCTCGTAACAATGCACACT +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGAVSLL*LVTMHT
Trigger: AGTGTGCATTGTTACGAGGCAAAGTAAGGAGACTGC...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR GCA 90 bp TGGTCATTGATGAACTTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTGGTCCTCTGAGGTGGGCTaGACCGACTTCCGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: WSLMNFMMGCQQFSLLMWSSEVG*TDFRLG
Trigger: TCCAAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGA...CCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGCGGTGGGCTGACTCCTaGGGTTTGACGATGGTGATC +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGERWADS*GLTMVI
Trigger: GATCACCATCGTCAAACCCCAGGAGTCAGCCCACCG...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAATTCTCGTTGTTGATGTaGTCCCCGAACCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEFSLLM*SPNPGV
Trigger: CACACCAGGGTTCGGGGACCACATCAACAACGAGAA...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGCCCACCACAGCAAATaGGATCATCTCCCGGAACTT +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEAHHSK*DHLPEL
Trigger: AAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGCTCTTGCCGTTGACCTaGTACTCGTGGTCACTGCCC +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGELLPLT*YSWSLP
Trigger: GGGCAGTGACCACGAGTACCAGGTCAACGGCAAGAG...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTTGTTTTCAACTTCGATaGTACCCCACTTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGCFQLR*YPTWSS
Trigger: GGAAGACCAAGTGGGGTACCATCGAAGTTGAAAACA...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGCGGTACGCCTCGAAGTaGATGCTGCTGGTGATGTCC +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGERYASK*MLLVMS
Trigger: GGACATCACCAGCAGCATCCACTTCGAGGCGTACCG...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGTCATGTCAATTCAGTaGGTGCTCTCACCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEVMSIQ*VLSPLP
Trigger: AGGCAGGGGTGAGAGCACCCACTGAATTGACATGAC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAAGTGGCAGGGGTGGCTaGCTGGGCATTAATGTAACT +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGESGRGG*LGINVT
Trigger: AGTTACATTAATGCCCAGCCAGCCACCCCTGCCACT...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGTTTGTGCTCCAAACTaGAGTAGCATTGTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGVCAPN*SSIVSS
Trigger: TGAAGAGACAATGCTACTTCAGTTTGGAGCACAAAC...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS-3UTR TCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGAGCAGTTCTCGTTGTTaGTGTGGTCCCCGAACCCTG +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGESSSRC*CGPRTL
Trigger: CAGGGTTCGGGGACCACATCAACAACGAGAACTGCT...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGTACACTCCTTCTCGCTaGCCTTCTCCTGGCTGCAAG +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEYTPSR*PSPGCK
Trigger: CTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTA...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGTACAGAGAAGGAAAGTaGAGCATCTCAAGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKYREGK*SISRLG
Trigger: TCCCAGCCTTGAGATGCTTCACTTTCCTTCTCTGTA...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp TGGTCATTGATGAACTTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTGGAAAAAGCCCAGTTCCTaGGTGCCTGCCTCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: WSLMNFMMGCQQFSLLMWKKPSS*VPASPS
Trigger: GGAAGGCGAGGCAGGCACGCAGGAACTGGGCTTTTT...CCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS-3UTR GCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGACTTTGGTCATCTGTaGCCTGCAAAGACAGCCCCC +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEDFGHL*PAKTAP
Trigger: GGGGGCTGTCTTTGCAGGGCACAGATGACCAAAGTC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAACGTTCTCCACCTGCTTaGACGAGATGTCAATGGACA +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGERSPPA*TRCQWT
Trigger: TGTCCATTGACATCTCGTCCAAGCAGGTGGAGAACG...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CCA 90 bp TGGTCATTGATGAACTTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTGGCGGTGGGCTGACTCCTaGGGTTTGACGATGGTGATC +
Preference number: 4 (lower is better)
Translates to: WSLMNFMMGCQQFSLLMWRWADS*GLTMVI
Trigger: GATCACCATCGTCAAACCCCAGGAGTCAGCCCACCG...CCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGTGGTCCCCGAACCCTaGTGTGTCAATCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEVVPEP*CVNHCQ
Trigger: CTGACAGTGATTGACACACCAGGGTTCGGGGACCAC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACAGGTATTTCTCGTACTaGTCATTGATGAACTTCATG +
Preference number: 4 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHRYFSY*SLMNFM
Trigger: CATGAAGTTCATCAATGACCAGTACGAGAAATACCT...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAAGCATGTCGAAGGGGTaGGGAACGATGACAAATGGA +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGESMSKG*GTMTNG
Trigger: TCCATTTGTCATCGTTCCCCACCCCTTCGACATGCT...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAAGCAGGAAGGGACTTTaGTCATCTGTGCCCTGCAAA +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGESRKGL*SSVPCK
Trigger: TTTGCAGGGCACAGATGACCAAAGTCCCTTCCTGCT...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGATGTGTGCACCTGAGTaGAGTCTCATCAGGCCCCTC +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEMCAPE*SLIRPL
Trigger: GAGGGGCCTGATGAGACTCCACTCAGGTGCACACAT...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR TCA 90 bp TGGTCATTGATGAACTTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTGGAGCAGTTCTCGTTGTTaGTGTGGTCCCCGAACCCTG +
Preference number: 4 (lower is better)
Translates to: WSLMNFMMGCQQFSLLMWSSSRC*CGPRTL
Trigger: CAGGGTTCGGGGACCACATCAACAACGAGAACTGCT...CCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS-3UTR GCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGTTGGACAGCAGGTCTaGGGTGATCCGCTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEVGQQV*GDPLFE
Trigger: TTCAAACAGCGGATCACCGCAGACCTGCTGTCCAAC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAATTGATGTTCTGCATGTaGGTCCTGATGAGAAGGTCC +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGELMFCM*VLMRRS
Trigger: GGACCTTCTCATCAGGACGCACATGCAGAACATCAA...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR GCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTTCCACCAGACTCACTTaGTTAGACCTTTTCAAAACT +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGSTRLT*LDLFKT
Trigger: AGTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGA...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TGGTCATTGATGAACTTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTGGGTGGTCCCCGAACCCTaGTGTGTCAATCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: WSLMNFMMGCQQFSLLMWVVPEP*CVNHCQ
Trigger: CTGACAGTGATTGACACACCAGGGTTCGGGGACCAC...CCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGCCCACCACAGCAAATaGGATCATCTCCCGGAACTT +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEAHHSK*DHLPEL
Trigger: AAGTTCCGGGAGATGATCCCATTTGCTGTGGTGGGC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGTGTTTTCAACTTCGATaGTACCCCACTTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKCFQLR*YPTWSS
Trigger: GGAAGACCAAGTGGGGTACCATCGAAGTTGAAAACA...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGAGTGGCAGGGGTGGCTaGCTGGGCATTAATGTAACT +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGESGRGG*LGINVT
Trigger: AGTTACATTAATGCCCAGCCAGCCACCCCTGCCACT...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR GCA 90 bp TGGTCATTGATGAACTTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTGGTTCCCTGTCCCGCGATaGTACGATTTCCTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: WSLMNFMMGCQQFSLLMWFPVPR*YDFLGL
Trigger: AAGCCCAAGGAAATCGTAGCATCGCGGGACAGGGAA...CCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGCGTTCTCCACCTGCTTaGACGAGATGTCAATGGACA +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGERSPPA*TRCQWT
Trigger: TGTCCATTGACATCTCGTCCAAGCAGGTGGAGAACG...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp TGGTCATTGATGAACTTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTGGTTCTCGTTGTTGATGTaGTCCCCGAACCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: WSLMNFMMGCQQFSLLMWFSLLM*SPNPGV
Trigger: CACACCAGGGTTCGGGGACCACATCAACAACGAGAA...CCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS-3UTR CCA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTAGGTATTTCTCGTACTaGTCATTGATGAACTTCATG +
Preference number: 4 (lower is better)
Translates to: THTLLLADLLLAASSQPGRYFSY*SLMNFM
Trigger: CATGAAGTTCATCAATGACCAGTACGAGAAATACCT...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAATGTTTTCAACTTCGATaGTACCCCACTTGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGECFQLR*YPTWSS
Trigger: GGAAGACCAAGTGGGGTACCATCGAAGTTGAAAACA...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGAGCATGTCGAAGGGGTaGGGAACGATGACAAATGGA +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGESMSKG*GTMTNG
Trigger: TCCATTTGTCATCGTTCCCCACCCCTTCGACATGCT...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGAGATCTTTTCAAGGCTaGGCCACTGGAGTCACCAAG +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGERSFQG*ATGVTK
Trigger: CTTGGTGACTCCAGTGGCCCAGCCTTGAAAAGATCT...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000427177.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CCA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGTATTTCTCGTACTaGTCATTGATGAACTTCATG +
Preference number: 4 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSRYFSY*SLMNFM
Trigger: CATGAAGTTCATCAATGACCAGTACGAGAAATACCT...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp TCTCGACCTCCTCGACCTCAAAAGATCTTTTCAAGGCTGGGCCACTGGAGTCACGAAAAACGTGCGCAGTaGAGAGAAGCAAGATTTGAA +
Preference number: 4 (lower is better)
Translates to: SRPPRPQKIFSRLGHWSHEKRAQ*REARFE
Trigger: TTCAAATCTTGCTTCTCTCCACTGCGCACGTTTTTC...GTGACTCCAGTGGCCCAGCCTTGAAAAGATCTTTTGAGGTCGAGGAGGTCGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS-3UTR GCA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGATGTCCTTGATGTTCTaGATGTGCGTCCTGATGAGA +
Preference number: 4 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEMSLMF*MCVLMR
Trigger: TCTCATCAGGACGCACATGCAGAACATCAAGGACAT...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CCA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAAGGTATTTCTCGTACTaGTCATTGATGAACTTCATG +
Preference number: 4 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGERYFSY*SLMNFM
Trigger: CATGAAGTTCATCAATGACCAGTACGAGAAATACCT...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR TCA 90 bp TGGTCATTGATGAACTTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTGGACAGAGTCAAATTCCTaGCGACTTCCAAAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: WSLMNFMMGCQQFSLLMWTESNS*RLPKSF
Trigger: GAAAGACTTTGGAAGTCGTCAGGAATTTGACTCTGT...CCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS CCA 90 bp CTGGGAGCCGCCTCAGTGGCCCAGCAGCGGAACGTCGGGCTGCGCTaGACGCGCCGAGAGCCGCGGCCCGCCCACCGGGTCACATGGCTC +
Preference number: 5 (lower is better)
Translates to: LGAASVAQQRNVGLR*TRREPRPAHRVTWL
Trigger: GAGCCATGTGACCCGGTGGGCGGGCCGCGGCTCTCGGCGCGTCCAGCGCAGCCCGACGTTCCGCTGCTGGGCCACTGAGGCGGCTCCCAG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586128.5
ENST00000591088.5
ENST00000592481.6
CDS CCA 90 bp CCCATCCAGCTGCGCGTTGACCGCGGGGTCCGACATGATGGCTGGTaGGCAGCGGGTCGCGCGGAGGGCAGCGGCGAGGAAGCGCCCCCG +
Preference number: 5 (lower is better)
Translates to: PIQLRVDRGVRHDGW*AAGRAEGSGEEAPP
Trigger: CGGGGGCGCTTCCTCGCCGCTGCCCTCCGCGCGACCCGCTGCCCACCAGCCATCATGTCGGACCCCGCGGTCAACGCGCAGCTGGATGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000423034.6
ENST00000590059.5
CDS GCA 90 bp GCCCGAAGTGGGCCCCGAGGAGTCCGGCAGACCACCGGGTCTGCCTaGGAGAGTCCCAGAGTCCCGGCCGCCCGGTCTGGTCGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: ARSGPRGVRQTTGSA*ESPRVPAARSGRWL
Trigger: CAGCCACCGACCAGACCGGGCGGCCGGGACTCTGGGACTCTCGCAGGCAGACCCGGTGGTCTGCCGGACTCCTCGGGGCCCACTTCGGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS GCA 90 bp GAGGGCCCGAAGTGGGCCCCGAGGAGTCCGGCAGACCACCGGGTCTaGCTGCGAGAGTCCCAGAGTCCCGGCCGCCCGGTCTGGTCGGTG +
Preference number: 5 (lower is better)
Translates to: EGPKWAPRSPADHRV*LRESQSPGRPVWSV
Trigger: CACCGACCAGACCGGGCGGCCGGGACTCTGGGACTCTCGCAGGCAGACCCGGTGGTCTGCCGGACTCCTCGGGGCCCACTTCGGGCCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS CCA 90 bp GATCCCATCCAGCTGCGCGTTGACCGCGGGGTCCGACATGATGGCTaGTGGGCAGCGGGTCGCGCGGAGGGCAGCGGCGAGGAAGCGCCC +
Preference number: 5 (lower is better)
Translates to: DPIQLRVDRGVRHDG*WAAGRAEGSGEEAP
Trigger: GGGCGCTTCCTCGCCGCTGCCCTCCGCGCGACCCGCTGCCCACCAGCCATCATGTCGGACCCCGCGGTCAACGCGCAGCTGGATGGGATC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423034.6
ENST00000590059.5
CDS-3UTR CAA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACACCGGCTCGGCCGCCTaGGGGCCCGAGAGCTCCACC +
Preference number: 5 (lower is better)
Translates to: GSSAASPQPRGGRGLITDTGSAA*GPESST
Trigger: GGTGGAGCTCTCGGGCCCCAAGGCGGCCGAGCCGGT...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS GCA 90 bp CCTGCGAGAGTCCCAGAGTCCCGGCCGCCCGGTCTGGTCGGTGGCTaGAGAGGTCCCGAGTGCGGCTTCCGGCAGCCTCCTCTCTCCACC +
Preference number: 5 (lower is better)
Translates to: PARVPESRPPGLVGG*RGPECGFRQPPLST
Trigger: GGTGGAGAGAGGAGGCTGCCGGAAGCCGCACTCGGGACCTCTGCAGCCACCGACCAGACCGGGCGGCCGGGACTCTGGGACTCTCGCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS CCA 90 bp GGCGCTGCTCCTGCGCCCATTCCCAGCCACTCCAGATGCTTCCCGTaGACCAGCTGCACTCCCGGCGGGCATGCCTGGCCCTCCGCAGCC +
Preference number: 5 (lower is better)
Translates to: GAAPAPIPSHSRCFP*TSCTPGGHAWPSAA
Trigger: GGCTGCGGAGGGCCAGGCATGCCCGCCGGGAGTGCAGCTGGTCCACGGGAAGCATCTGGAGTGGCTGGGAATGGGCGCAGGAGCAGCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427674.6
ENST00000592407.1
CDS-3UTR CAA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTACCGGCTCGGCCGCCTaGGGGCCCGAGAGCTCCACC +
Preference number: 5 (lower is better)
Translates to: CGSSAASPQPRGGRGLITTGSAA*GPESST
Trigger: GGTGGAGCTCTCGGGCCCCAAGGCGGCCGAGCCGGT...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CAA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATACCGGCTCGGCCGCCTaGGGGCCCGAGAGCTCCACC +
Preference number: 5 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHTGSAA*GPESST
Trigger: GGTGGAGCTCTCGGGCCCCAAGGCGGCCGAGCCGGT...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS TCA 90 bp GAGGGGCCGGTTCTGGCGTCTTGTGGCCCAACACCTCGGCCCTCTTaGGCCCGAACCGGGACGGGCCGATGGCCCCGGCGTTCTCCACCT +
Preference number: 5 (lower is better)
Translates to: EGPVLASCGPTPRPS*ARTGTGRWPRRSPP
Trigger: AGGTGGAGAACGCCGGGGCCATCGGCCCGTCCCGGTTCGGGCTCAAGAGGGCCGAGGTGTTGGGCCACAAGACGCCAGAACCGGCCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000588690.6
ENST00000589140.1
ENST00000590294.6
ENST00000590576.5
ENST00000590586.1
ENST00000590825.1
ENST00000591198.5
ENST00000592098.1
ENST00000592420.1
CDS TCA 90 bp GAGGGGCCGGTTCTGGCGTCTTGTGGCCCAACACCTCGGCCCTCTTaGGCCCGAACCGGGACGGGCCGATGGCCCCGGCGTTCTCCACAG +
Preference number: 5 (lower is better)
Translates to: EGPVLASCGPTPRPS*ARTGTGRWPRRSPQ
Trigger: CTGTGGAGAACGCCGGGGCCATCGGCCCGTCCCGGTTCGGGCTCAAGAGGGCCGAGGTGTTGGGCCACAAGACGCCAGAACCGGCCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588575.1
ENST00000590595.1
CDS GCA 90 bp TGCTCCCACGGCGCTGCTCCTGCGCCCATTCCCAGCCACTCCAGATaGTTCCCGTGGACCAGCTGCACTCCCGGCGGGCATGCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: CSHGAAPAPIPSHSR*FPWTSCTPGGHAWP
Trigger: GGGCCAGGCATGCCCGCCGGGAGTGCAGCTGGTCCACGGGAAGCATCTGGAGTGGCTGGGAATGGGCGCAGGAGCAGCGCCGTGGGAGCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427674.6
ENST00000592407.1
CDS CCA 90 bp TCTGCCTGCGAGAGTCCCAGAGTCCCGGCCGCCCGGTCTGGTCGGTaGCTGCAGAGGTCCCGAGTGCGGCTTCCGGCAGCCTCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: SACESPRVPAARSGR*LQRSRVRLPAASSL
Trigger: GAGAGAGGAGGCTGCCGGAAGCCGCACTCGGGACCTCTGCAGCCACCGACCAGACCGGGCGGCCGGGACTCTGGGACTCTCGCAGGCAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS CCA 90 bp CTGCGCTGGACGCGCCGAGAGCCGCGGCCCGCCCACCGGGTCACATaGCTCAGAGCCGAGCAGAGGATCAAAGGGGCTTTGTGGTCGCGG +
Preference number: 5 (lower is better)
Translates to: LRWTRREPRPAHRVT*LRAEQRIKGALWSR
Trigger: CCGCGACCACAAAGCCCCTTTGATCCTCTGCTCGGCTCTGAGCCATGTGACCCGGTGGGCGGGCCGCGGCTCTCGGCGCGTCCAGCGCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586128.5
ENST00000591088.5
ENST00000592481.6
CDS-3UTR CAA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCACCGGCTCGGCCGCCTaGGGGCCCGAGAGCTCCACC +
Preference number: 5 (lower is better)
Translates to: SAASPQPRGGRGLITDSLTGSAA*GPESST
Trigger: GGTGGAGCTCTCGGGCCCCAAGGCGGCCGAGCCGGT...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CAA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACGGCACCTCGGGGACCTaGGAGGCAGGGGGCTCCATC +
Preference number: 5 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANGTSGT*EAGGSI
Trigger: GATGGAGCCCCCTGCCTCCAAGGTCCCCGAGGTGCC...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCAGCTGCCAGGGGGCTaGGAGTGGCTGGGCAGTCGG +
Preference number: 5 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANQLPGG*EWLGSR
Trigger: CCGACTGCCCAGCCACTCCAAGCCCCCTGGCAGCTG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS TCA 90 bp GGGCTGTCCACCCGAGCAGGACGCGGCTGTCCACTCAGTCGGAGGTaGGGAACGACCTCCCTATCCCGTTGCCGGGTCCAAGCGGGGCCC +
Preference number: 5 (lower is better)
Translates to: GLSTRAGRGCPLSRR*GTTSLSRCRVQAGP
Trigger: GGGCCCCGCTTGGACCCGGCAACGGGATAGGGAGGTCGTTCCTCACCTCCGACTGAGTGGACAGCCGCGTCCTGCTCGGGTGGACAGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587514.1
CDS GCA 90 bp CCTGCGCCCATTCCCAGCCACTCCAGATGCTTCCCGTGGACCAGCTaGACTCCCGGCGGGCATGCCTGGCCCTCCGCAGCCTGGCCCATA +
Preference number: 5 (lower is better)
Translates to: PAPIPSHSRCFPWTS*TPGGHAWPSAAWPI
Trigger: TATGGGCCAGGCTGCGGAGGGCCAGGCATGCCCGCCGGGAGTGCAGCTGGTCCACGGGAAGCATCTGGAGTGGCTGGGAATGGGCGCAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427674.6
ENST00000592407.1
CDS CCA 90 bp GGCCGATGGCCCCGGCGTTCTCCACCTGCTTGGACGAGATGTCAATaGACAGCTCAGTGCGCCGGGACACCGGCTCGGCCGCCTTGGGGC +
Preference number: 5 (lower is better)
Translates to: GRWPRRSPPAWTRCQ*TAQCAGTPARPPWG
Trigger: GCCCCAAGGCGGCCGAGCCGGTGTCCCGGCGCACTGAGCTGTCCATTGACATCTCGTCCAAGCAGGTGGAGAACGCCGGGGCCATCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 19 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000586812.1
ENST00000587514.1
ENST00000588690.6
ENST00000589070.1
ENST00000589140.1
ENST00000590294.6
ENST00000590576.5
ENST00000590586.1
ENST00000590825.1
ENST00000591198.5
ENST00000591934.1
ENST00000592098.1
ENST00000592420.1
CDS-3UTR CAA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCGGGGTGGGGTGGAGTaGGGTGTCTCGACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANRGGVE*GVSTSS
Trigger: CGAGGAGGTCGAGACACCCAACTCCACCCCACCCCG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACCTCCGCAGGGACGCCTaGGGGGAGCGTTGGCTTAGG +
Preference number: 5 (lower is better)
Translates to: GSSAASPQPRGGRGLITDLRRDA*GERWLR
Trigger: CCTAAGCCAACGCTCCCCCAAGGCGTCCCTGCGGAG...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CAA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAAACACCTCGGCCCTCTaGAGCCCGAACCGGGACGGG +
Preference number: 5 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSNTSAL*SPNRDG
Trigger: CCCGTCCCGGTTCGGGCTCAAGAGGGCCGAGGTGTT...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CAA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACGCCGGTTCTGGCGTCTaGTGGCCCAACACCTCGGCC +
Preference number: 5 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANAGSGV*WPNTSA
Trigger: GGCCGAGGTGTTGGGCCACAAGACGCCAGAACCGGC...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGGCACCTCGGGGACCTaGGAGGCAGGGGGCTCCATC +
Preference number: 5 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHGTSGT*EAGGSI
Trigger: GATGGAGCCCCCTGCCTCCAAGGTCCCCGAGGTGCC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGGCACCTCGGGGACCTaGGAGGCAGGGGGCTCCATC +
Preference number: 5 (lower is better)
Translates to: CGSSAASPQPRGGRGLITGTSGT*EAGGSI
Trigger: GATGGAGCCCCCTGCCTCCAAGGTCCCCGAGGTGCC...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CAA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACGGGGACGGAAATGACTaGGGGGCAGGATCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANGDGND*GAGSRG
Trigger: CCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCC...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACGGGGACGGAAATGACTaGGGGGCAGGATCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: GSSAASPQPRGGRGLITDGDGND*GAGSRG
Trigger: CCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCC...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGGGGACGGAAATGACTaGGGGGCAGGATCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSGDGND*GAGSRG
Trigger: CCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCCAGCTGCCAGGGGGCTaGGAGTGGCTGGGCAGTCGG +
Preference number: 5 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLQLPGG*EWLGSR
Trigger: CCGACTGCCCAGCCACTCCAAGCCCCCTGGCAGCTG...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCAGCTGCCAGGGGGCTaGGAGTGGCTGGGCAGTCGG +
Preference number: 5 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHQLPGG*EWLGSR
Trigger: CCGACTGCCCAGCCACTCCAAGCCCCCTGGCAGCTG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACCCGGCGAAGACTTCCTaGCCTCCATCCACCCCGGCC +
Preference number: 5 (lower is better)
Translates to: GSSAASPQPRGGRGLITDPAKTS*PPSTPA
Trigger: GGCCGGGGTGGATGGAGGCAAGGAAGTCTTCGCCGG...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS TCA 90 bp CGCCACCCTCGGGAGCCCTCCTGGGAAAGCTTCCCAAGGCTCTGCTaGGCTCCGGGAACAGGTCCCTACCTGTCCGGGAACCGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: RHPREPSWESFPRLC*APGTGPYLSGNRAG
Trigger: GCCAGCCCGGTTCCCGGACAGGTAGGGACCTGTTCCCGGAGCTCAGCAGAGCCTTGGGAAGCTTTCCCAGGAGGGCTCCCGAGGGTGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585929.5
CDS CCA 90 bp GCCCGAACCGGGACGGGCCGATGGCCCCGGCGTTCTCCACCTGCTTaGACGAGATGTCAATGGACAGCTCAGTGCGCCGGGACACCGGCT +
Preference number: 5 (lower is better)
Translates to: ARTGTGRWPRRSPPA*TRCQWTAQCAGTPA
Trigger: AGCCGGTGTCCCGGCGCACTGAGCTGTCCATTGACATCTCGTCCAAGCAGGTGGAGAACGCCGGGGCCATCGGCCCGTCCCGGTTCGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000586812.1
ENST00000587514.1
ENST00000588690.6
ENST00000589070.1
ENST00000589140.1
ENST00000590294.6
ENST00000590576.5
ENST00000590586.1
ENST00000590825.1
ENST00000591198.5
ENST00000591934.1
ENST00000592098.1
ENST00000592420.1
CDS CCA 90 bp ACGATGGTGATCTCCGTCCTCCGAGGGGCCGGTTCTGGCGTCTTGTaGCCCAACACCTCGGCCCTCTTGAGCCCGAACCGGGACGGGCCG +
Preference number: 5 (lower is better)
Translates to: TMVISVLRGAGSGVL*PNTSALLSPNRDGP
Trigger: CGGCCCGTCCCGGTTCGGGCTCAAGAGGGCCGAGGTGTTGGGCCACAAGACGCCAGAACCGGCCCCTCGGAGGACGGAGATCACCATCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000588575.1
ENST00000588690.6
ENST00000589140.1
ENST00000590294.6
ENST00000590576.5
ENST00000590586.1
ENST00000590595.1
ENST00000590825.1
ENST00000591198.5
ENST00000592098.1
ENST00000592420.1
CDS CCA 90 bp GGATCCCGGGGGTGGGCAGGGTGGCGTCTACATCTCCGGGGCTTCTaGCTCCTTCTCCTCCATGCCGTTGGCCATGGCGCTGCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: GSRGWAGWRLHLRGF*LLLLHAVGHGAAAL
Trigger: GAGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGAAGGAGCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCCCCGGGATCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000589246.1
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCCTCCGCAGGGACGCCTaGGGGGAGCGTTGGCTTAGG +
Preference number: 5 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLLRRDA*GERWLR
Trigger: CCTAAGCCAACGCTCCCCCAAGGCGTCCCTGCGGAG...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATCTCCGCAGGGACGCCTaGGGGGAGCGTTGGCTTAGG +
Preference number: 5 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHLRRDA*GERWLR
Trigger: CCTAAGCCAACGCTCCCCCAAGGCGTCCCTGCGGAG...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCTCCGCAGGGACGCCTaGGGGGAGCGTTGGCTTAGG +
Preference number: 5 (lower is better)
Translates to: QPPHNLGEAAASSLTHSELRRDA*GERWLR
Trigger: CCTAAGCCAACGCTCCCCCAAGGCGTCCCTGCGGAG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CAA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACAACACCTCGGCCCTCTaGAGCCCGAACCGGGACGGG +
Preference number: 5 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHNTSAL*SPNRDG
Trigger: CCCGTCCCGGTTCGGGCTCAAGAGGGCCGAGGTGTT...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CAA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTAACACCTCGGCCCTCTaGAGCCCGAACCGGGACGGG +
Preference number: 5 (lower is better)
Translates to: CGSSAASPQPRGGRGLITNTSAL*SPNRDG
Trigger: CCCGTCCCGGTTCGGGCTCAAGAGGGCCGAGGTGTT...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CAA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGCCGGTTCTGGCGTCTaGTGGCCCAACACCTCGGCC +
Preference number: 5 (lower is better)
Translates to: CGSSAASPQPRGGRGLITAGSGV*WPNTSA
Trigger: GGCCGAGGTGTTGGGCCACAAGACGCCAGAACCGGC...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CAA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGCCGGTTCTGGCGTCTaGTGGCCCAACACCTCGGCC +
Preference number: 5 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLAGSGV*WPNTSA
Trigger: GGCCGAGGTGTTGGGCCACAAGACGCCAGAACCGGC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACTGGATCTCCACCCTCTaGGGGGCTGCGTCGGTGGCA +
Preference number: 5 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANWISTL*GAASVA
Trigger: TGCCACCGACGCAGCCCCCAAGAGGGTGGAGATCCA...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGGCGCCTCAGCAGGCTaGGGCATCTGGATCTCCACC +
Preference number: 5 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSGASAG*GIWIST
Trigger: GGTGGAGATCCAGATGCCCAAGCCTGCTGAGGCGCC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CAA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGCGCTGCTGCCCTCGTaGAGGCGCTTCACACGGTAC +
Preference number: 5 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSALLPS*RRFTRY
Trigger: GTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGGGGACGGAAATGACTaGGGGGCAGGATCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHGDGND*GAGSRG
Trigger: CCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGGGGACGGAAATGACTaGGGGGCAGGATCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEGDGND*GAGSRG
Trigger: CCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS TCA 90 bp CGAAGTCCACCGGGGCCTTCTCGTTCCGTGATGCAGGCGCCTGCTTaGGCCCGGCATCTCTGGGGGTGTCGGCCATGTCGCCAACGCAGC +
Preference number: 5 (lower is better)
Translates to: RSPPGPSRSVMQAPA*ARHLWGCRPCRQRS
Trigger: GCTGCGTTGGCGACATGGCCGACACCCCCAGAGATGCCGGGCTCAAGCAGGCGCCTGCATCACGGAACGAGAAGGCCCCGGTGGACTTCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 31 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585638.1
ENST00000585929.5
ENST00000585930.5
ENST00000586128.5
ENST00000586433.5
ENST00000586521.5
ENST00000588690.6
ENST00000588958.6
ENST00000589250.6
ENST00000589920.5
ENST00000590059.5
ENST00000590294.6
ENST00000590917.5
ENST00000590938.5
ENST00000591020.5
ENST00000591088.5
ENST00000591198.5
ENST00000591472.6
ENST00000591704.5
ENST00000592420.1
ENST00000592481.6
ENST00000592951.5
ENST00000593189.6
CDS GCA 90 bp GCCCGTGTCCAGGAGAAAGCTGCCGGCATCTACAGCTGGTGCCCTTaGCCCGGCGAAGACTTCCTTGCCTCCATCCACCCCGGCCCAGCG +
Preference number: 5 (lower is better)
Translates to: ARVQEKAAGIYSWCP*PGEDFLASIHPGPA
Trigger: CGCTGGGCCGGGGTGGATGGAGGCAAGGAAGTCTTCGCCGGGGCAAGGGCACCAGCTGTAGATGCCGGCAGCTTTCTCCTGGACACGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS GCA 90 bp GCCTCAGTGGCGGCACTCACAGGTGTGTCTCCCACCTCCGGCCTCTaGACAGGCGGCCCCACATTCTGGGAGCTCAGCCTCCCCCAAGGA +
Preference number: 5 (lower is better)
Translates to: ASVAALTGVSPTSGL*TGGPTFWELSLPQG
Trigger: TCCTTGGGGGAGGCTGAGCTCCCAGAATGTGGGGCCGCCTGTGCAGAGGCCGGAGGTGGGAGACACACCTGTGAGTGCCGCCACTGAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586521.5
CDS CCA 90 bp GGCTCGCTCACGCTCACGCAGCTAACACAGGCAGCAGCCGGAACCTaGAAGCTCCTGGGGTGGGAGCCTGTCCCCTCCCAGGCCCTTCCA +
Preference number: 5 (lower is better)
Translates to: GSLTLTQLTQAAAGT*KLLGWEPVPSQALP
Trigger: TGGAAGGGCCTGGGAGGGGACAGGCTCCCACCCCAGGAGCTTCCAGGTTCCGGCTGCTGCCTGTGTTAGCTGCGTGAGCGTGAGCGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593189.6
CDS-3UTR CAA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCAACACCTCGGCCCTCTaGAGCCCGAACCGGGACGGG +
Preference number: 5 (lower is better)
Translates to: SAASPQPRGGRGLITDSLNTSAL*SPNRDG
Trigger: CCCGTCCCGGTTCGGGCTCAAGAGGGCCGAGGTGTT...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CAA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTTGGATCTCCACCCTCTaGGGGGCTGCGTCGGTGGCA +
Preference number: 5 (lower is better)
Translates to: CGSSAASPQPRGGRGLITWISTL*GAASVA
Trigger: TGCCACCGACGCAGCCCCCAAGAGGGTGGAGATCCA...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CAA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGGCGCCTCAGCAGGCTaGGGCATCTGGATCTCCACC +
Preference number: 5 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLGASAG*GIWIST
Trigger: GGTGGAGATCCAGATGCCCAAGCCTGCTGAGGCGCC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGGCGCCTCAGCAGGCTaGGGCATCTGGATCTCCACC +
Preference number: 5 (lower is better)
Translates to: CGSSAASPQPRGGRGLITGASAG*GIWIST
Trigger: GGTGGAGATCCAGATGCCCAAGCCTGCTGAGGCGCC...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CAA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGGCGCCTCAGCAGGCTaGGGCATCTGGATCTCCACC +
Preference number: 5 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEGASAG*GIWIST
Trigger: GGTGGAGATCCAGATGCCCAAGCCTGCTGAGGCGCC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CAA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGGCGCCTCAGCAGGCTaGGGCATCTGGATCTCCACC +
Preference number: 5 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHGASAG*GIWIST
Trigger: GGTGGAGATCCAGATGCCCAAGCCTGCTGAGGCGCC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGCGCTGCTGCCCTCGTaGAGGCGCTTCACACGGTAC +
Preference number: 5 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEALLPS*RRFTRY
Trigger: GTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGCGCTGCTGCCCTCGTaGAGGCGCTTCACACGGTAC +
Preference number: 5 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHALLPS*RRFTRY
Trigger: GTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGCGCTGCTGCCCTCGTaGAGGCGCTTCACACGGTAC +
Preference number: 5 (lower is better)
Translates to: CGSSAASPQPRGGRGLITALLPS*RRFTRY
Trigger: GTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGC...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACGGGAGGCCCCTTCCCTaGTTTCCTGGCAGCATGTCG +
Preference number: 5 (lower is better)
Translates to: GSSAASPQPRGGRGLITDGRPLP*FPGSMS
Trigger: CGACATGCTGCCAGGAAACAAGGGAAGGGGCCTCCC...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGGGAGGCCCCTTCCCTaGTTTCCTGGCAGCATGTCG +
Preference number: 5 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSGRPLP*FPGSMS
Trigger: CGACATGCTGCCAGGAAACAAGGGAAGGGGCCTCCC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS GCA 90 bp TTGAGCCCGAACCGGGACGGGCCGATGGCCCCGGCGTTCTCCACCTaGTTGGACGAGATGTCAATGGACAGCTCAGTGCGCCGGGACACC +
Preference number: 5 (lower is better)
Translates to: LSPNRDGPMAPAFST*LDEMSMDSSVRRDT
Trigger: GGTGTCCCGGCGCACTGAGCTGTCCATTGACATCTCGTCCAAGCAGGTGGAGAACGCCGGGGCCATCGGCCCGTCCCGGTTCGGGCTCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000586812.1
ENST00000587514.1
ENST00000588690.6
ENST00000589070.1
ENST00000589140.1
ENST00000590294.6
ENST00000590576.5
ENST00000590586.1
ENST00000590825.1
ENST00000591198.5
ENST00000591934.1
ENST00000592098.1
ENST00000592420.1
CDS GCA 90 bp CCACTCCAGATGCTTCCCGTGGACCAGCTGCACTCCCGGCGGGCATaGCTGGCCCTCCGCAGCCTGGCCCATATGATCTTCACAGGCAGG +
Preference number: 5 (lower is better)
Translates to: PLQMLPVDQLHSRRA*LALRSLAHMIFTGR
Trigger: CCTGCCTGTGAAGATCATATGGGCCAGGCTGCGGAGGGCCAGGCATGCCCGCCGGGAGTGCAGCTGGTCCACGGGAAGCATCTGGAGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427674.6
ENST00000592407.1
CDS GCA 90 bp GCAGGAACCAAGACACCAGGTGAGCCGCCCCGGGAAAGAGACCTGTaGTCCCACGGCGCTGCTCCTGCGCCCATTCCCAGCCACTCCAGA +
Preference number: 5 (lower is better)
Translates to: AGTKTPGEPPRERDL*SHGAAPAPIPSHSR
Trigger: TCTGGAGTGGCTGGGAATGGGCGCAGGAGCAGCGCCGTGGGAGCACAGGTCTCTTTCCCGGGGCGGCTCACCTGGTGTCTTGGTTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427674.6
ENST00000592407.1
CDS CCA 90 bp GGGACCTTGGAGGCAGGGGGCTCCATCCTCCGGTGGGCTGACTCCTaGGGTTTGACGATGGTGATCTCCGTCCTCCGAGGGGCCGGTTCT +
Preference number: 5 (lower is better)
Translates to: GTLEAGGSILRWADS*GLTMVISVLRGAGS
Trigger: AGAACCGGCCCCTCGGAGGACGGAGATCACCATCGTCAAACCCCAGGAGTCAGCCCACCGGAGGATGGAGCCCCCTGCCTCCAAGGTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000588690.6
ENST00000590294.6
ENST00000590595.1
ENST00000590825.1
ENST00000591198.5
ENST00000592420.1
CDS CCA 90 bp GGGCAGGCTCTGAATTCTCCAAGGTCTGGGCTGGGCTGGGGGCGGTaGGCGCCTCAGCAGGCTTGGGCATCTGGATCTCCACCCTCTTGG +
Preference number: 5 (lower is better)
Translates to: GQALNSPRSGLGWGR*APQQAWASGSPPSW
Trigger: CCAAGAGGGTGGAGATCCAGATGCCCAAGCCTGCTGAGGCGCCCACCGCCCCCAGCCCAGCCCAGACCTTGGAGAATTCAGAGCCTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000588690.6
ENST00000590294.6
ENST00000590595.1
ENST00000591198.5
ENST00000592420.1
CDS CCA 90 bp TCCGGCTTGGAGGCAGGGGGCTCCATCCTCCGGTGGGCTGACTCCTaGGGTTTGACGATGGTGATCTCCGTCCTCCGAGGGGCCGGTTCT +
Preference number: 5 (lower is better)
Translates to: SGLEAGGSILRWADS*GLTMVISVLRGAGS
Trigger: AGAACCGGCCCCTCGGAGGACGGAGATCACCATCGTCAAACCCCAGGAGTCAGCCCACCGGAGGATGGAGCCCCCTGCCTCCAAGCCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS CCA 90 bp GCCCCTCCACCTTGCCTGCACCTCTGCAGGTGGGCACAGCTGCCATaGGAGGGAGGAGGGAGGAGAGCAGAGCTGCCCCACGTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: APPPCLHLCRWAQLP*EGGGRRAELPHVLF
Trigger: GAACAAGACGTGGGGCAGCTCTGCTCTCCTCCCTCCTCCCTCCCATGGCAGCTGTGCCCACCTGCAGAGGTGCAGGCAAGGTGGAGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS-3UTR CAA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTGGATCTCCACCCTCTaGGGGGCTGCGTCGGTGGCA +
Preference number: 5 (lower is better)
Translates to: SAASPQPRGGRGLITDSLWISTL*GAASVA
Trigger: TGCCACCGACGCAGCCCCCAAGAGGGTGGAGATCCA...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CAA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGCGCCTCAGCAGGCTaGGGCATCTGGATCTCCACC +
Preference number: 5 (lower is better)
Translates to: SAASPQPRGGRGLITDSLGASAG*GIWIST
Trigger: GGTGGAGATCCAGATGCCCAAGCCTGCTGAGGCGCC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CAA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGTGAGTGTGTCCGCCTaGGCGATGACAGGGACGATG +
Preference number: 5 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSVSVSA*AMTGTM
Trigger: CATCGTCCCTGTCATCGCCAAGGCGGACACACTCAC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACGCGGTGATCCGCTGTTaGAAGTGGACCCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: GSSAASPQPRGGRGLITDAVIRC*KWTLSS
Trigger: GGAGGAGAGGGTCCACTTCAAACAGCGGATCACCGC...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGCGCTGCTGCCCTCGTaGAGGCGCTTCACACGGTAC +
Preference number: 5 (lower is better)
Translates to: SAASPQPRGGRGLITDSLALLPS*RRFTRY
Trigger: GTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACCGCCACCAAGTGACATaGAGGCTGGGCAGGCCACAT +
Preference number: 5 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANRHQVT*RLGRPH
Trigger: ATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCG...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGGCCTTCCCAGAAACTaGAGCCCATGGGGGCACTTC +
Preference number: 5 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSGLPRN*SPWGHF
Trigger: GAAGTGCCCCCATGGGCTCAAGTTTCTGGGAAGGCC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS GCA 90 bp TTCCAGGCCCGTGTCCAGGAGAAAGCTGCCGGCATCTACAGCTGGTaGCCTTGCCCCGGCGAAGACTTCCTTGCCTCCATCCACCCCGGC +
Preference number: 5 (lower is better)
Translates to: FQARVQEKAAGIYSW*PCPGEDFLASIHPG
Trigger: GCCGGGGTGGATGGAGGCAAGGAAGTCTTCGCCGGGGCAAGGGCACCAGCTGTAGATGCCGGCAGCTTTCTCCTGGACACGGGCCTGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS CCA 90 bp CTGGGGTTTGACGATGGTGATCTCCGTCCTCCGAGGGGCCGGTTCTaGCGTCTTGTGGCCCAACACCTCGGCCCTCTTGAGCCCGAACCG +
Preference number: 5 (lower is better)
Translates to: LGFDDGDLRPPRGRF*RLVAQHLGPLEPEP
Trigger: CGGTTCGGGCTCAAGAGGGCCGAGGTGTTGGGCCACAAGACGCCAGAACCGGCCCCTCGGAGGACGGAGATCACCATCGTCAAACCCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000588575.1
ENST00000588690.6
ENST00000589140.1
ENST00000590294.6
ENST00000590595.1
ENST00000590825.1
ENST00000591198.5
ENST00000592420.1
CDS CCA 90 bp GCCTTCCAGGCCCGTGTCCAGGAGAAAGCTGCCGGCATCTACAGCTaGTGCCCTTGCCCCGGCGAAGACTTCCTTGCCTCCATCCACCCC +
Preference number: 5 (lower is better)
Translates to: AFQARVQEKAAGIYS*CPCPGEDFLASIHP
Trigger: GGGGTGGATGGAGGCAAGGAAGTCTTCGCCGGGGCAAGGGCACCAGCTGTAGATGCCGGCAGCTTTCTCCTGGACACGGGCCTGGAAGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS CCA 90 bp GCTGCACCGACTTCCGGCTTGGAGGCAGGGGGCTCCATCCTCCGGTaGGCTGACTCCTGGGGTTTGACGATGGTGATCTCCGTCCTCCGA +
Preference number: 5 (lower is better)
Translates to: AAPTSGLEAGGSILR*ADSWGLTMVISVLR
Trigger: TCGGAGGACGGAGATCACCATCGTCAAACCCCAGGAGTCAGCCCACCGGAGGATGGAGCCCCCTGCCTCCAAGCCGGAAGTCGGTGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS CCA 90 bp TCAAGGCTGGGCCACTGGAGTCACCAAGCCTCCGGAGCCGGCCACTaGAGGTCCGCGTGCCTCCGTTCCAATTCCACCTACCGCGCAGAA +
Preference number: 5 (lower is better)
Translates to: SRLGHWSHQASGAGH*RSACLRSNSTYRAE
Trigger: TTCTGCGCGGTAGGTGGAATTGGAACGGAGGCACGCGGACCTCCAGTGGCCGGCTCCGGAGGCTTGGTGACTCCAGTGGCCCAGCCTTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS-3UTR CAA 90 bp GGCTTAGGGAGTCCACATGGCGGGCCGAGGGTTCTGAGTTCTTCACGCCCAGGTCTCCGCAGGGACGCCTaGGGGGAGCGTTGGCTTAGG +
Preference number: 5 (lower is better)
Translates to: GLGSPHGGPRVLSSSRPGLRRDA*GERWLR
Trigger: CCTAAGCCAACGCTCCCCCAAGGCGTCCCTGCGGAG...ACCTGGGCGTGAAGAACTCAGAACCCTCGGCCCGCCATGTGGACTCCCTAAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS-3UTR CAA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATAACACCTCGGCCCTCTaGAGCCCGAACCGGGACGGG +
Preference number: 5 (lower is better)
Translates to: TFSWLQAASPVPADAPGDNTSAL*SPNRDG
Trigger: CCCGTCCCGGTTCGGGCTCAAGAGGGCCGAGGTGTT...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCATCCGGGATGCGCTTCTaGCGGTTGATGTTGACCTCC +
Preference number: 5 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSSGMRF*RLMLTS
Trigger: GGAGGTCAACATCAACCGCAAGAAGCGCATCCCGGA...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCCGGGATGCGCTTCTaGCGGTTGATGTTGACCTCC +
Preference number: 5 (lower is better)
Translates to: GSSAASPQPRGGRGLITDSGMRF*RLMLTS
Trigger: GGAGGTCAACATCAACCGCAAGAAGCGCATCCCGGA...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGTGAGTGTGTCCGCCTaGGCGATGACAGGGACGATG +
Preference number: 5 (lower is better)
Translates to: CGSSAASPQPRGGRGLITVSVSA*AMTGTM
Trigger: CATCGTCCCTGTCATCGCCAAGGCGGACACACTCAC...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGTGAGTGTGTCCGCCTaGGCGATGACAGGGACGATG +
Preference number: 5 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHVSVSA*AMTGTM
Trigger: CATCGTCCCTGTCATCGCCAAGGCGGACACACTCAC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGTGAGTGTGTCCGCCTaGGCGATGACAGGGACGATG +
Preference number: 5 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEVSVSA*AMTGTM
Trigger: CATCGTCCCTGTCATCGCCAAGGCGGACACACTCAC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGCGGTGATCCGCTGTTaGAAGTGGACCCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHAVIRC*KWTLSS
Trigger: GGAGGAGAGGGTCCACTTCAAACAGCGGATCACCGC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGCGGTGATCCGCTGTTaGAAGTGGACCCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEAVIRC*KWTLSS
Trigger: GGAGGAGAGGGTCCACTTCAAACAGCGGATCACCGC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGCGGTGATCCGCTGTTaGAAGTGGACCCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: CGSSAASPQPRGGRGLITAVIRC*KWTLSS
Trigger: GGAGGAGAGGGTCCACTTCAAACAGCGGATCACCGC...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGTACACGTCGATGCCGTaGGACAGCAGGTCTGCGGTG +
Preference number: 5 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEYTSMP*DSRSAV
Trigger: CACCGCAGACCTGCTGTCCAACGGCATCGACGTGTA...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTACACGTCGATGCCGTaGGACAGCAGGTCTGCGGTG +
Preference number: 5 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHYTSMP*DSRSAV
Trigger: CACCGCAGACCTGCTGTCCAACGGCATCGACGTGTA...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATTACACGTCGATGCCGTaGGACAGCAGGTCTGCGGTG +
Preference number: 5 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHYTSMP*DSRSAV
Trigger: CACCGCAGACCTGCTGTCCAACGGCATCGACGTGTA...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACCTCCCAAGGATCCTCTaGCCGTTGACCTGGTACTCG +
Preference number: 5 (lower is better)
Translates to: GSSAASPQPRGGRGLITDLPRIL*PLTWYS
Trigger: CGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAG...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCGCCACCAAGTGACATaGAGGCTGGGCAGGCCACAT +
Preference number: 5 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHRHQVT*RLGRPH
Trigger: ATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCCGCCACCAAGTGACATaGAGGCTGGGCAGGCCACAT +
Preference number: 5 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLRHQVT*RLGRPH
Trigger: ATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCG...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCGCCACCAAGTGACATaGAGGCTGGGCAGGCCACAT +
Preference number: 5 (lower is better)
Translates to: QPPHNLGEAAASSLTHSERHQVT*RLGRPH
Trigger: ATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS GCA 90 bp GACAAAGCTGGGATTCTCCCCGGGGTCTGTGGACCTCCAAACAGGTaGCCCTCCACCTTGCCTGCACCTCTGCAGGTGGGCACAGCTGCC +
Preference number: 5 (lower is better)
Translates to: DKAGILPGVCGPPNR*PSTLPAPLQVGTAA
Trigger: GGCAGCTGTGCCCACCTGCAGAGGTGCAGGCAAGGTGGAGGGGCACCTGTTTGGAGGTCCACAGACCCCGGGGAGAATCCCAGCTTTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS CCA 90 bp CGGGTCACATGGCTCAGAGCCGAGCAGAGGATCAAAGGGGCTTTGTaGTCGCGGAACAAGGAGCCTCCCAGAGCGCGGGGCAGAGGTAGG +
Preference number: 5 (lower is better)
Translates to: RVTWLRAEQRIKGAL*SRNKEPPRARGRGR
Trigger: CCTACCTCTGCCCCGCGCTCTGGGAGGCTCCTTGTTCCGCGACCACAAAGCCCCTTTGATCCTCTGCTCGGCTCTGAGCCATGTGACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586128.5
ENST00000591088.5
ENST00000592481.6
CDS CCA 90 bp GGTGTCGGCCATGTCGCCAACGCAGCTGGGAGCCGCCTCAGTGGCTaGGGAAGGAACAGCAGAGGAGTTAGAGCGGAACAGGGGCTCACA +
Preference number: 5 (lower is better)
Translates to: GVGHVANAAGSRLSG*GRNSRGVRAEQGLT
Trigger: TGTGAGCCCCTGTTCCGCTCTAACTCCTCTGCTGTTCCTTCCCCAGCCACTGAGGCGGCTCCCAGCTGCGTTGGCGACATGGCCGACACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589920.5
CDS CCA 90 bp CAGCCAAGGGCCACAAGTCCCTCAGGAAGCCTCTTCCCCAAAGAGTaGCTGTGGGACGCTGGGAGCCTCCAGGGTGGTCAGCCTCCAGGT +
Preference number: 5 (lower is better)
Translates to: QPRATSPSGSLFPKE*LWDAGSLQGGQPPG
Trigger: ACCTGGAGGCTGACCACCCTGGAGGCTCCCAGCGTCCCACAGCCACTCTTTGGGGAAGAGGCTTCCTGAGGGACTTGTGGCCCTTGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585929.5
ENST00000590917.5
ENST00000592951.5
CDS-3UTR CAA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCCCGCCGCCCCGAGGCTaGCTGCTCCTTTTTAATATC +
Preference number: 5 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLPPPRG*LLLFNI
Trigger: GATATTAAAAAGGAGCAGCAAGCCTCGGGGCGGCGG...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS-3UTR CAA 90 bp GGAGTTGGGTGTCTCGACCTCCTCGACCTCAAAAGATCTTTTCAAGGCTGGGCCACCGGCTCGGCCGCCTaGGGGCCCGAGAGCTCCACC +
Preference number: 5 (lower is better)
Translates to: GVGCLDLLDLKRSFQGWATGSAA*GPESST
Trigger: GGTGGAGCTCTCGGGCCCCAAGGCGGCCGAGCCGGT...GGCCCAGCCTTGAAAAGATCTTTTGAGGTCGAGGAGGTCGAGACACCCAACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS-3UTR CAA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACGCGTTCTCCACCTGCTaGGACGAGATGTCAATGGAC +
Preference number: 5 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANAFSTC*DEMSMD
Trigger: GTCCATTGACATCTCGTCCAAGCAGGTGGAGAACGC...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGCGTTCTCCACCTGCTaGGACGAGATGTCAATGGAC +
Preference number: 5 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSAFSTC*DEMSMD
Trigger: GTCCATTGACATCTCGTCCAAGCAGGTGGAGAACGC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CAA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATGCTGACTCCTGGGGTTaGACGATGGTGATCTCCGTC +
Preference number: 5 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHADSWG*TMVISV
Trigger: GACGGAGATCACCATCGTCAAACCCCAGGAGTCAGC...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGCTGACTCCTGGGGTTaGACGATGGTGATCTCCGTC +
Preference number: 5 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLADSWG*TMVISV
Trigger: GACGGAGATCACCATCGTCAAACCCCAGGAGTCAGC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGCTGACTCCTGGGGTTaGACGATGGTGATCTCCGTC +
Preference number: 5 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHADSWG*TMVISV
Trigger: GACGGAGATCACCATCGTCAAACCCCAGGAGTCAGC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CAA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCATTGATCTCGATGGTCTaGGGGATGCGCTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSLISMV*GMRSSE
Trigger: CTCAGAGGAGCGCATCCCCAAGACCATCGAGATCAA...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATTCCGGGATGCGCTTCTaGCGGTTGATGTTGACCTCC +
Preference number: 5 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHSGMRF*RLMLTS
Trigger: GGAGGTCAACATCAACCGCAAGAAGCGCATCCCGGA...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGTCCGGGATGCGCTTCTaGCGGTTGATGTTGACCTCC +
Preference number: 5 (lower is better)
Translates to: QPPHNLGEAAASSLTHSESGMRF*RLMLTS
Trigger: GGAGGTCAACATCAACCGCAAGAAGCGCATCCCGGA...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACATGACAGGGACGATGTaGACCACCTTGCTCAGGCGT +
Preference number: 5 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANMTGTM*TTLLRR
Trigger: ACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCAT...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAATGACAGGGACGATGTaGACCACCTTGCTCAGGCGT +
Preference number: 5 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSMTGTM*TTLLRR
Trigger: ACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCAT...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGTGAGTGTGTCCGCCTaGGCGATGACAGGGACGATG +
Preference number: 5 (lower is better)
Translates to: SAASPQPRGGRGLITDSLVSVSA*AMTGTM
Trigger: CATCGTCCCTGTCATCGCCAAGGCGGACACACTCAC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGCGGTGATCCGCTGTTaGAAGTGGACCCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SAASPQPRGGRGLITDSLAVIRC*KWTLSS
Trigger: GGAGGAGAGGGTCCACTTCAAACAGCGGATCACCGC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTACACGTCGATGCCGTaGGACAGCAGGTCTGCGGTG +
Preference number: 5 (lower is better)
Translates to: SAASPQPRGGRGLITDSLYTSMP*DSRSAV
Trigger: CACCGCAGACCTGCTGTCCAACGGCATCGACGTGTA...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACAGGATCCTCTTGCCGTaGACCTGGTACTCGTGGTCA +
Preference number: 5 (lower is better)
Translates to: GSSAASPQPRGGRGLITDRILLP*TWYSWS
Trigger: TGACCACGAGTACCAGGTCAACGGCAAGAGGATCCT...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCTCCCAAGGATCCTCTaGCCGTTGACCTGGTACTCG +
Preference number: 5 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHLPRIL*PLTWYS
Trigger: CGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCTCCCAAGGATCCTCTaGCCGTTGACCTGGTACTCG +
Preference number: 5 (lower is better)
Translates to: QPPHNLGEAAASSLTHSELPRIL*PLTWYS
Trigger: CGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCTCCCAAGGATCCTCTaGCCGTTGACCTGGTACTCG +
Preference number: 5 (lower is better)
Translates to: CGSSAASPQPRGGRGLITLPRIL*PLTWYS
Trigger: CGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAG...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCATCGATGGTACCCCACTaGGTCTTCCTCCCAAGGATC +
Preference number: 5 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSSMVPH*VFLPRI
Trigger: GATCCTTGGGAGGAAGACCAAGTGGGGTACCATCGA...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACTCGATGGTACCCCACTaGGTCTTCCTCCCAAGGATC +
Preference number: 5 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANSMVPH*VFLPRI
Trigger: GATCCTTGGGAGGAAGACCAAGTGGGGTACCATCGA...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCGATGGTACCCCACTaGGTCTTCCTCCCAAGGATC +
Preference number: 5 (lower is better)
Translates to: GSSAASPQPRGGRGLITDSMVPH*VFLPRI
Trigger: GATCCTTGGGAGGAAGACCAAGTGGGGTACCATCGA...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGCGCTGCTGCCCTCGTaGAGGCGCTTCACACGGTAC +
Preference number: 5 (lower is better)
Translates to: TFSWLQAASPVPADAPGDALLPS*RRFTRY
Trigger: GTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGCAGCTGCCAGGGGGCTaGGAGTGGCTGGGCAGTCGG +
Preference number: 5 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGQLPGG*EWLGSR
Trigger: CCGACTGCCCAGCCACTCCAAGCCCCCTGGCAGCTG...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACTGCTGCCACGAAACCTaGCTCTTCAGCTGTGGACTG +
Preference number: 5 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANCCHET*LFSCGL
Trigger: CAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCA...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCGCCACCAAGTGACATaGAGGCTGGGCAGGCCACAT +
Preference number: 5 (lower is better)
Translates to: SAASPQPRGGRGLITDSLRHQVT*RLGRPH
Trigger: ATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATAGCCGCCTCAGTGGCTaGTCTGTCACTGCCAATGGT +
Preference number: 5 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHSRLSG*SVTANG
Trigger: ACCATTGGCAGTGACAGACAAGCCACTGAGGCGGCT...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR CAA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACAGGATGACCAGCGACTaGAGTTCCTGCCAGAGACAG +
Preference number: 5 (lower is better)
Translates to: GSSAASPQPRGGRGLITDRMTSD*SSCQRQ
Trigger: CTGTCTCTGGCAGGAACTCAAGTCGCTGGTCATCCT...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAAGGATCAAAGGGGCTTaGTGGTCGCGGAACAAGGAG +
Preference number: 5 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSRIKGA*WSRNKE
Trigger: CTCCTTGTTCCGCGACCACAAAGCCCCTTTGATCCT...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000591088.5
CDS TCA 90 bp GAGCATGCTTGGGGATCAGAGCAGCTCTCGCAGTGGCTTGCAGCCTaGCAACGCGGCGTGAGCCATGCCCTGAGATCCGGTCCCTCTCCA +
Preference number: 5 (lower is better)
Translates to: EHAWGSEQLSQWLAA*QRGVSHALRSGPSP
Trigger: TGGAGAGGGACCGGATCTCAGGGCATGGCTCACGCCGCGTTGTCAGGCTGCAAGCCACTGCGAGAGCTGCTCTGATCCCCAAGCATGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591934.1
CDS GCA 90 bp CAAGCTGACGTCATTGCTCAGAGGCAGCGACCACTCATCAGGACCTaGTCCAGGCCGGCCTGGGCTCCCCAAAGTCATCTCAGGGGCCCT +
Preference number: 5 (lower is better)
Translates to: QADVIAQRQRPLIRT*SRPAWAPQSHLRGP
Trigger: AGGGCCCCTGAGATGACTTTGGGGAGCCCAGGCCGGCCTGGAGCAGGTCCTGATGAGTGGTCGCTGCCTCTGAGCAATGACGTCAGCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS GCA 90 bp CAGCAGGCTTGGGCATCTTCGAAGTCCGAAATGATCCCATCCAGCTaGGCGTTGACCGCGGGGTCCGACATGATGGCTGGTGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: QQAWASSKSEMIPSS*ALTAGSDMMAGGQR
Trigger: CCGCTGCCCACCAGCCATCATGTCGGACCCCGCGGTCAACGCGCAGCTGGATGGGATCATTTCGGACTTCGAAGATGCCCAAGCCTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590059.5
CDS GCA 90 bp CACAGGCACAGCGTCCTCCCCATGGCTCCTCCTCAGGCCAGAGCATaGTTGGGGATCAGAGCAGCTCTCGCAGTGGCTTGCAGCCTGACA +
Preference number: 5 (lower is better)
Translates to: HRHSVLPMAPPQARA*LGIRAALAVACSLT
Trigger: TGTCAGGCTGCAAGCCACTGCGAGAGCTGCTCTGATCCCCAAGCATGCTCTGGCCTGAGGAGGAGCCATGGGGAGGACGCTGTGCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591934.1
CDS GCA 90 bp AGATCTTTTCAAGGAGCCACGTCTGGAAGTCAGCGGGCCGGCATCTaGCGGGCAGGCCTCTGTCACACAGGCACAGCGTCCTCCCCATGG +
Preference number: 5 (lower is better)
Translates to: RSFQGATSGSQRAGI*RAGLCHTGTASSPW
Trigger: CCATGGGGAGGACGCTGTGCCTGTGTGACAGAGGCCTGCCCGGCAGATGCCGGCCCGCTGACTTCCAGACGTGGCTCCTTGAAAAGATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591934.1
CDS CCA 90 bp GATGAGGTTCCACGAGTCCCTGGCTCAGGCGTGGCCCACAGGCTCTaGGTCAGCAGAAGAGACTGTCTTCCCATCTGTCTGGAGCCCCGG +
Preference number: 5 (lower is better)
Translates to: DEVPRVPGSGVAHRL*VSRRDCLPICLEPR
Trigger: CCGGGGCTCCAGACAGATGGGAAGACAGTCTCTTCTGCTGACCCAGAGCCTGTGGGCCACGCCTGAGCCAGGGACTCGTGGAACCTCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589250.6
CDS CCA 90 bp GGGCAGGCTCTGAATTCTCCAAGGTCTGGGCTGGGCTGGGGGCGGTaGGCGCCTCAGCAGGCTTGGGCATCTTCGAAGTCCGAAATGATC +
Preference number: 5 (lower is better)
Translates to: GQALNSPRSGLGWGR*APQQAWASSKSEMI
Trigger: GATCATTTCGGACTTCGAAGATGCCCAAGCCTGCTGAGGCGCCCACCGCCCCCAGCCCAGCCCAGACCTTGGAGAATTCAGAGCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590059.5
CDS-3UTR CAA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTCTCCGCAGGGACGCCTaGGGGGAGCGTTGGCTTAGG +
Preference number: 5 (lower is better)
Translates to: THTLLLADLLLAASSQPGLRRDA*GERWLR
Trigger: CCTAAGCCAACGCTCCCCCAAGGCGTCCCTGCGGAG...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGCTCCGCAGGGACGCCTaGGGGGAGCGTTGGCTTAGG +
Preference number: 5 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGLRRDA*GERWLR
Trigger: CCTAAGCCAACGCTCCCCCAAGGCGTCCCTGCGGAG...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGCCGGTTCTGGCGTCTaGTGGCCCAACACCTCGGCC +
Preference number: 5 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGAGSGV*WPNTSA
Trigger: GGCCGAGGTGTTGGGCCACAAGACGCCAGAACCGGC...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCGGCACCTCGGGGACCTaGGAGGCAGGGGGCTCCATC +
Preference number: 5 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSGTSGT*EAGGSI
Trigger: GATGGAGCCCCCTGCCTCCAAGGTCCCCGAGGTGCC...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTTTGATCTCGATGGTCTaGGGGATGCGCTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: CGSSAASPQPRGGRGLITLISMV*GMRSSE
Trigger: CTCAGAGGAGCGCATCCCCAAGACCATCGAGATCAA...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTTGATCTCGATGGTCTaGGGGATGCGCTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHLISMV*GMRSSE
Trigger: CTCAGAGGAGCGCATCCCCAAGACCATCGAGATCAA...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTCCGGGATGCGCTTCTaGCGGTTGATGTTGACCTCC +
Preference number: 5 (lower is better)
Translates to: SAASPQPRGGRGLITDSLSGMRF*RLMLTS
Trigger: GGAGGTCAACATCAACCGCAAGAAGCGCATCCCGGA...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACATGACAGGGACGATGTaGACCACCTTGCTCAGGCGT +
Preference number: 5 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHMTGTM*TTLLRR
Trigger: ACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCAT...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGATGACAGGGACGATGTaGACCACCTTGCTCAGGCGT +
Preference number: 5 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEMTGTM*TTLLRR
Trigger: ACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCAT...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTAGGATCCTCTTGCCGTaGACCTGGTACTCGTGGTCA +
Preference number: 5 (lower is better)
Translates to: CGSSAASPQPRGGRGLITRILLP*TWYSWS
Trigger: TGACCACGAGTACCAGGTCAACGGCAAGAGGATCCT...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCAGGATCCTCTTGCCGTaGACCTGGTACTCGTGGTCA +
Preference number: 5 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLRILLP*TWYSWS
Trigger: TGACCACGAGTACCAGGTCAACGGCAAGAGGATCCT...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGAGGATCCTCTTGCCGTaGACCTGGTACTCGTGGTCA +
Preference number: 5 (lower is better)
Translates to: QPPHNLGEAAASSLTHSERILLP*TWYSWS
Trigger: TGACCACGAGTACCAGGTCAACGGCAAGAGGATCCT...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCTCGATGGTACCCCACTaGGTCTTCCTCCCAAGGATC +
Preference number: 5 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLSMVPH*VFLPRI
Trigger: GATCCTTGGGAGGAAGACCAAGTGGGGTACCATCGA...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTTCGATGGTACCCCACTaGGTCTTCCTCCCAAGGATC +
Preference number: 5 (lower is better)
Translates to: CGSSAASPQPRGGRGLITSMVPH*VFLPRI
Trigger: GATCCTTGGGAGGAAGACCAAGTGGGGTACCATCGA...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGGGAGGCCCCTTCCCTaGTTTCCTGGCAGCATGTCG +
Preference number: 5 (lower is better)
Translates to: TFSWLQAASPVPADAPGDGRPLP*FPGSMS
Trigger: CGACATGCTGCCAGGAAACAAGGGAAGGGGCCTCCC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAAACTACAGCCCAGTCTaGGGCCAAACCCAGACACTA +
Preference number: 5 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSNYSPV*GQTQTL
Trigger: TAGTGTCTGGGTTTGGCCCAAGACTGGGCTGTAGTT...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACAACTACAGCCCAGTCTaGGGCCAAACCCAGACACTA +
Preference number: 5 (lower is better)
Translates to: GSSAASPQPRGGRGLITDNYSPV*GQTQTL
Trigger: TAGTGTCTGGGTTTGGCCCAAGACTGGGCTGTAGTT...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATTGCTGCCACGAAACCTaGCTCTTCAGCTGTGGACTG +
Preference number: 5 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHCCHET*LFSCGL
Trigger: CAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCA...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp GATGGCCACACCATGTGGCGGGCAGGGGGTCCAGGTGCTCCTGGTGGGCTGCATAGGATGACCAGCGACTaGAGTTCCTGCCAGAGACAG +
Preference number: 5 (lower is better)
Translates to: DGHTMWRAGGPGAPGGLHRMTSD*SSCQRQ
Trigger: CTGTCTCTGGCAGGAACTCAAGTCGCTGGTCATCCT...ATGCAGCCCACCAGGAGCACCTGGACCCCCTGCCCGCCACATGGTGTGGCCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431235.6
ENST00000449803.6
CDS TCA 90 bp CTCTCCTATCTCCCTGGGTGCCTGCAAAGTCCTTCAGATCCCTGCTaGATCCTGGGGAAGCCCTGCCTCGCAACCAGGGCTTGCCCTCCC +
Preference number: 5 (lower is better)
Translates to: LSYLPGCLQSPSDPC*ILGKPCLATRACPP
Trigger: GGGAGGGCAAGCCCTGGTTGCGAGGCAGGGCTTCCCCAGGATTCAGCAGGGATCTGAAGGACTTTGCAGGCACCCAGGGAGATAGGAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS GCA 90 bp GTCCCTGATGCAGGCAATGCTAGGAGGACAGTGTCCGGCCAGGGCTaGTCCCTCCTCCTCTCCTATCTCCCTGGGTGCCTGCAAAGTCCT +
Preference number: 5 (lower is better)
Translates to: VPDAGNARRTVSGQG*SLLLSYLPGCLQSP
Trigger: AGGACTTTGCAGGCACCCAGGGAGATAGGAGAGGAGGAGGGAGCAGCCCTGGCCGGACACTGTCCTCCTAGCATTGCCTGCATCAGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS GCA 90 bp TCTGAGGAGCCGCTGGAGGCTGTGGGCTCCTCCCAGGCGCATGCATaGACACGCAATGTCACTGGCAATCCGTCCTTGAGGTCAGGGTTG +
Preference number: 5 (lower is better)
Translates to: SEEPLEAVGSSQAHA*TRNVTGNPSLRSGL
Trigger: CAACCCTGACCTCAAGGACGGATTGCCAGTGACATTGCGTGTGCATGCATGCGCCTGGGAGGAGCCCACAGCCTCCAGCGGCTCCTCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS GCA 90 bp CAGGAAGAAGGTGGACTGTCGCAAACGCAATGCTCCGCTGCCAGGTaGATTGCCCTCGGCTATCAGAATCCCTCTGGGCAGGCCGGGGAG +
Preference number: 5 (lower is better)
Translates to: QEEGGLSQTQCSAAR*IALGYQNPSGQAGE
Trigger: CTCCCCGGCCTGCCCAGAGGGATTCTGATAGCCGAGGGCAATGCACCTGGCAGCGGAGCATTGCGTTTGCGACAGTCCACCTTCTTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590576.5
ENST00000631417.1
CDS GCA 90 bp GCTCTCAGGGAGCATGGCCAGCCACCCCAGAAAGCCATTCAGACCTaGAGCCAGGGCTGGAACACAGCCACCTGGGTTTGTCCCCTCTAC +
Preference number: 5 (lower is better)
Translates to: ALREHGQPPQKAIQT*SQGWNTATWVCPLY
Trigger: GTAGAGGGGACAAACCCAGGTGGCTGTGTTCCAGCCCTGGCTGCAGGTCTGAATGGCTTTCTGGGGTGGCTGGCCATGCTCCCTGAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591704.5
CDS CCA 90 bp AAGTCCCTCAGGAAGCCTCTTCCCCAAAGAGTGGCTGTGGGACGCTaGGAGCCTCCAGGGTGGTCAGCCTCCAGGTCTTCCCAAAGCCCA +
Preference number: 5 (lower is better)
Translates to: KSLRKPLPQRVAVGR*EPPGWSASRSSQSP
Trigger: TGGGCTTTGGGAAGACCTGGAGGCTGACCACCCTGGAGGCTCCCAGCGTCCCACAGCCACTCTTTGGGGAAGAGGCTTCCTGAGGGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585929.5
ENST00000590917.5
ENST00000592951.5
CDS-3UTR CAA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGCGTTCTCCACCTGCTaGGACGAGATGTCAATGGAC +
Preference number: 5 (lower is better)
Translates to: SAASPQPRGGRGLITDSLAFSTC*DEMSMD
Trigger: GTCCATTGACATCTCGTCCAAGCAGGTGGAGAACGC...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CAA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCATGACAGGGACGATGTaGACCACCTTGCTCAGGCGT +
Preference number: 5 (lower is better)
Translates to: SAASPQPRGGRGLITDSLMTGTM*TTLLRR
Trigger: ACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCAT...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGTGAGTGTGTCCGCCTaGGCGATGACAGGGACGATG +
Preference number: 5 (lower is better)
Translates to: TFSWLQAASPVPADAPGDVSVSA*AMTGTM
Trigger: CATCGTCCCTGTCATCGCCAAGGCGGACACACTCAC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACGTGAGTGTGTCCGCCTaGGCGATGACAGGGACGATG +
Preference number: 5 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHVSVSA*AMTGTM
Trigger: CATCGTCCCTGTCATCGCCAAGGCGGACACACTCAC...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CAA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGCGGTGATCCGCTGTTaGAAGTGGACCCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: TFSWLQAASPVPADAPGDAVIRC*KWTLSS
Trigger: GGAGGAGAGGGTCCACTTCAAACAGCGGATCACCGC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACGCGGTGATCCGCTGTTaGAAGTGGACCCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHAVIRC*KWTLSS
Trigger: GGAGGAGAGGGTCCACTTCAAACAGCGGATCACCGC...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CAA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATTACACGTCGATGCCGTaGGACAGCAGGTCTGCGGTG +
Preference number: 5 (lower is better)
Translates to: TFSWLQAASPVPADAPGDYTSMP*DSRSAV
Trigger: CACCGCAGACCTGCTGTCCAACGGCATCGACGTGTA...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACTACACGTCGATGCCGTaGGACAGCAGGTCTGCGGTG +
Preference number: 5 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHYTSMP*DSRSAV
Trigger: CACCGCAGACCTGCTGTCCAACGGCATCGACGTGTA...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CAA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCAGGATCCTCTTGCCGTaGACCTGGTACTCGTGGTCA +
Preference number: 5 (lower is better)
Translates to: SAASPQPRGGRGLITDSLRILLP*TWYSWS
Trigger: TGACCACGAGTACCAGGTCAACGGCAAGAGGATCCT...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTCGATGGTACCCCACTaGGTCTTCCTCCCAAGGATC +
Preference number: 5 (lower is better)
Translates to: SAASPQPRGGRGLITDSLSMVPH*VFLPRI
Trigger: GATCCTTGGGAGGAAGACCAAGTGGGGTACCATCGA...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCGCTGCTGCCCTCGTaGAGGCGCTTCACACGGTAC +
Preference number: 5 (lower is better)
Translates to: THTLLLADLLLAASSQPGALLPS*RRFTRY
Trigger: GTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGC...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCGGGGACGGAAATGACTaGGGGGCAGGATCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSGDGND*GAGSRG
Trigger: CCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCC...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCAACTACAGCCCAGTCTaGGGCCAAACCCAGACACTA +
Preference number: 5 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLNYSPV*GQTQTL
Trigger: TAGTGTCTGGGTTTGGCCCAAGACTGGGCTGTAGTT...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACAACTACAGCCCAGTCTaGGGCCAAACCCAGACACTA +
Preference number: 5 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHNYSPV*GQTQTL
Trigger: TAGTGTCTGGGTTTGGCCCAAGACTGGGCTGTAGTT...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCTGCTGCCACGAAACCTaGCTCTTCAGCTGTGGACTG +
Preference number: 5 (lower is better)
Translates to: SAASPQPRGGRGLITDSLCCHET*LFSCGL
Trigger: CAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCA...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS TCA 90 bp GAAGGACGTGCACGGCTGGCAAAGGTCAGAGAAACAGGCCCGGCCTaGGAGGTGCCCAGACACCTTGCAGAAACCCCGCAAGCTCACCTT +
Preference number: 5 (lower is better)
Translates to: EGRARLAKVRETGPA*EVPRHLAETPQAHL
Trigger: AAGGTGAGCTTGCGGGGTTTCTGCAAGGTGTCTGGGCACCTCTCAGGCCGGGCCTGTTTCTCTGACCTTTGCCAGCCGTGCACGTCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS GCA 90 bp GCAGAGAGGACACCAAGACCCCAGGGGAGCCAGGGCCCAGATCAGTaGAGAAGAGGAAAGAAAGGTGTCGGGCTGGCAGGTGTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: AERTPRPQGSQGPDQ*RRGKKGVGLAGVGL
Trigger: CAAACCCACACCTGCCAGCCCGACACCTTTCTTTCCTCTTCTGCACTGATCTGGGCCCTGGCTCCCCTGGGGTCTTGGTGTCCTCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS GCA 90 bp AAGGCTGTAAATGGGCGCGTTGGACAGATGATCATTTGTTCTCCCTaGGCTGGGCACCGTGCGCAGCTCGGTGTATCGGTGCAGCGGGGC +
Preference number: 5 (lower is better)
Translates to: KAVNGRVGQMIICSP*AGHRAQLGVSVQRG
Trigger: GCCCCGCTGCACCGATACACCGAGCTGCGCACGGTGCCCAGCGCAGGGAGAACAAATGATCATCTGTCCAACGCGCCCATTTACAGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589070.1
CDS CCA 90 bp CCTGGAAGAAATGCCCGCTTCTTCCTTCCACCCAGTAGTGACCCCTaGCTCGCTCACGCTCACGCAGCTAACACAGGCAGCAGCCGGAAC +
Preference number: 5 (lower is better)
Translates to: PGRNARFFLPPSSDP*LAHAHAANTGSSRN
Trigger: GTTCCGGCTGCTGCCTGTGTTAGCTGCGTGAGCGTGAGCGAGCCAGGGGTCACTACTGGGTGGAAGGAAGAAGCGGGCATTTCTTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593189.6
CDS CCA 90 bp AAAGGCTTGTGGGCCGCCCTGGGGGCTGAGGCTGGTTTCCGGCATTaGTTGAGTGGCATGCAAGGTGAGGACTCACCGACCACCATGATG +
Preference number: 5 (lower is better)
Translates to: KGLWAALGAEAGFRH*LSGMQGEDSPTTMM
Trigger: CATCATGGTGGTCGGTGAGTCCTCACCTTGCATGCCACTCAACCAATGCCGGAAACCAGCCTCAGCCCCCAGGGCGGCCCACAAGCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS CCA 90 bp GCCAGGGCCCAGATCAGTGCAGAAGAGGAAAGAAAGGTGTCGGGCTaGCAGGTGTGGGTTTGCGTCCACAGAGCTGGGCAGGAAGGACGT +
Preference number: 5 (lower is better)
Translates to: ARAQISAEEERKVSG*QVWVCVHRAGQEGR
Trigger: ACGTCCTTCCTGCCCAGCTCTGTGGACGCAAACCCACACCTGCCAGCCCGACACCTTTCTTTCCTCTTCTGCACTGATCTGGGCCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS-3UTR CAA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGCGGGGTGGGGTGGAGTaGGGTGTCTCGACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKRGGVE*GVSTSS
Trigger: CGAGGAGGTCGAGACACCCAACTCCACCCCACCCCG...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGACCGGCTCGGCCGCCTaGGGGCCCGAGAGCTCCACC +
Preference number: 5 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGETGSAA*GPESST
Trigger: GGTGGAGCTCTCGGGCCCCAAGGCGGCCGAGCCGGT...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGAACACCTCGGCCCTCTaGAGCCCGAACCGGGACGGG +
Preference number: 5 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKNTSAL*SPNRDG
Trigger: CCCGTCCCGGTTCGGGCTCAAGAGGGCCGAGGTGTT...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCTGGATCTCCACCCTCTaGGGGGCTGCGTCGGTGGCA +
Preference number: 5 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSWISTL*GAASVA
Trigger: TGCCACCGACGCAGCCCCCAAGAGGGTGGAGATCCA...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACTCCGGGATGCGCTTCTaGCGGTTGATGTTGACCTCC +
Preference number: 5 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHSGMRF*RLMLTS
Trigger: GGAGGTCAACATCAACCGCAAGAAGCGCATCCCGGA...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CAA 90 bp AGCTCACGCCACTCTGACCAGCCCAAGCCACGGCCCACACGTGCCCCCGCCAACACGATGTTGACCACCTaGCTCAGGCGTTTCATAAAC +
Preference number: 5 (lower is better)
Translates to: SSRHSDQPKPRPTRAPANTMLTT*LRRFIN
Trigger: GTTTATGAAACGCCTGAGCAAGGTGGTCAACATCGT...GTTGGCGGGGGCACGTGTGGGCCGTGGCTTGGGCTGGTCAGAGTGGCGTGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAACGATGTTGACCACCTaGCTCAGGCGTTTCATAAAC +
Preference number: 5 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSTMLTT*LRRFIN
Trigger: GTTTATGAAACGCCTGAGCAAGGTGGTCAACATCGT...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACCTCCCAAGGATCCTCTaGCCGTTGACCTGGTACTCG +
Preference number: 5 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHLPRIL*PLTWYS
Trigger: CGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAG...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CAA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGGGGACGGAAATGACTaGGGGGCAGGATCCCGGGGG +
Preference number: 5 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKGDGND*GAGSRG
Trigger: CCCCCGGGATCCTGCCCCCAAGTCATTTCCGTCCCC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGGGAGGCCCCTTCCCTaGTTTCCTGGCAGCATGTCG +
Preference number: 5 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGGRPLP*FPGSMS
Trigger: CGACATGCTGCCAGGAAACAAGGGAAGGGGCCTCCC...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAACAGCTGCCAGGGGGCTaGGAGTGGCTGGGCAGTCGG +
Preference number: 5 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEQLPGG*EWLGSR
Trigger: CCGACTGCCCAGCCACTCCAAGCCCCCTGGCAGCTG...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS TCA 90 bp CCACTGTTCTTCTCAGGGTTGAAAGGGCGAAGAGGCCCAGACAGGTaGAGTGGCCTCCTGCGCACCATTCCCAGAGGGCAAGGCTGTCAC +
Preference number: 5 (lower is better)
Translates to: PLFFSGLKGRRGPDR*SGLLRTIPRGQGCH
Trigger: GTGACAGCCTTGCCCTCTGGGAATGGTGCGCAGGAGGCCACTTCACCTGTCTGGGCCTCTTCGCCCTTTCAACCCTGAGAAGAACAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS GCA 90 bp CGCCTCAGTGGCTTGTCTGTCACTGCCAATGGTGGCCAAGCAGAATaGAAGGTCATCCTCCTCCTGCCCACGGAGGCCTGTGAAGCCACT +
Preference number: 5 (lower is better)
Translates to: RLSGLSVTANGGQAE*KVILLLPTEACEAT
Trigger: AGTGGCTTCACAGGCCTCCGTGGGCAGGAGGAGGATGACCTTGCATTCTGCTTGGCCACCATTGGCAGTGACAGACAAGCCACTGAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS GCA 90 bp ACAGAGGCGACAGGTAACAGCAATCCATTAGCACAGCGTGTGGCCTaGCCTAGCCACGGCACCTTCCTCCACTCTGTGCCCTCTCACCAC +
Preference number: 5 (lower is better)
Translates to: TEATGNSNPLAQRVA*PSHGTFLHSVPSHH
Trigger: GTGGTGAGAGGGCACAGAGTGGAGGAAGGTGCCGTGGCTAGGGCAGGCCACACGCTGTGCTAATGGATTGCTGTTACCTGTCGCCTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591472.6
CDS GCA 90 bp CCCGTGGAGTGGGCAGAACACAGTTCTGGGAGTCAAAACGGTGGCTaGGGTTCTCTGCCCTGTGAGCTAAGGAACCTTGGCAGCCTTCCC +
Preference number: 5 (lower is better)
Translates to: PVEWAEHSSGSQNGG*GSLPCELRNLGSLP
Trigger: GGGAAGGCTGCCAAGGTTCCTTAGCTCACAGGGCAGAGAACCGCAGCCACCGTTTTGACTCCCAGAACTGTGTTCTGCCCACTCCACGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS GCA 90 bp GTGGTTCCAGGAAGAAGGTGGACTGTCGCAAACGCAATGCTCCGCTaGCAGGTGCATTGCCCTCGGCTATCAGAATCCCTCTGGGCAGGC +
Preference number: 5 (lower is better)
Translates to: VVPGRRWTVANAMLR*QVHCPRLSESLWAG
Trigger: GCCTGCCCAGAGGGATTCTGATAGCCGAGGGCAATGCACCTGGCAGCGGAGCATTGCGTTTGCGACAGTCCACCTTCTTCCTGGAACCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590576.5
ENST00000631417.1
CDS GCA 90 bp CACTGGAGTCACCAAGCCTCCGGAGCCGGCCACTGGAGGTCCGCGTaGCTCCGTTCCAATTCCACCTACCGCGCAGAATCAAAAATCACA +
Preference number: 5 (lower is better)
Translates to: HWSHQASGAGHWRSA*LRSNSTYRAESKIT
Trigger: TGTGATTTTTGATTCTGCGCGGTAGGTGGAATTGGAACGGAGGCACGCGGACCTCCAGTGGCCGGCTCCGGAGGCTTGGTGACTCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS CCA 90 bp AAGAAAGGTGTCGGGCTGGCAGGTGTGGGTTTGCGTCCACAGAGCTaGGCAGGAAGGACGTGCACGGCTGGCAAAGGTCAGAGAAACAGG +
Preference number: 5 (lower is better)
Translates to: KKGVGLAGVGLRPQS*AGRTCTAGKGQRNR
Trigger: CCTGTTTCTCTGACCTTTGCCAGCCGTGCACGTCCTTCCTGCCCAGCTCTGTGGACGCAAACCCACACCTGCCAGCCCGACACCTTTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS CCA 90 bp GTTCTTCTCAGGGTTGAAAGGGCGAAGAGGCCCAGACAGGTGAAGTaGCCTCCTGCGCACCATTCCCAGAGGGCAAGGCTGTCACAGTGG +
Preference number: 5 (lower is better)
Translates to: VLLRVERAKRPRQVK*PPAHHSQRARLSQW
Trigger: CCACTGTGACAGCCTTGCCCTCTGGGAATGGTGCGCAGGAGGCCACTTCACCTGTCTGGGCCTCTTCGCCCTTTCAACCCTGAGAAGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS CCA 90 bp TGTAAATGGGCGCGTTGGACAGATGATCATTTGTTCTCCCTGCGCTaGGCACCGTGCGCAGCTCGGTGTATCGGTGCAGCGGGGCAGACA +
Preference number: 5 (lower is better)
Translates to: CKWARWTDDHLFSLR*APCAARCIGAAGQT
Trigger: TGTCTGCCCCGCTGCACCGATACACCGAGCTGCGCACGGTGCCCAGCGCAGGGAGAACAAATGATCATCTGTCCAACGCGCCCATTTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589070.1
ENST00000633557.1
CDS CCA 90 bp CTGCTGAGCTCCGGGAACAGGTCCCTACCTGTCCGGGAACCGGGCTaGCACTCAATAAACAAATCAAAGCTCGGCGCCGGAAGGCAGAAC +
Preference number: 5 (lower is better)
Translates to: LLSSGNRSLPVREPG*HSINKSKLGAGRQN
Trigger: GTTCTGCCTTCCGGCGCCGAGCTTTGATTTGTTTATTGAGTGCCAGCCCGGTTCCCGGACAGGTAGGGACCTGTTCCCGGAGCTCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585929.5
CDS-3UTR CAA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAACGGGGTGGGGTGGAGTaGGGTGTCTCGACCTCCTCG +
Preference number: 5 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGERGGVE*GVSTSS
Trigger: CGAGGAGGTCGAGACACCCAACTCCACCCCACCCCG...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CAA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAAACACCTCGGCCCTCTaGAGCCCGAACCGGGACGGG +
Preference number: 5 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGENTSAL*SPNRDG
Trigger: CCCGTCCCGGTTCGGGCTCAAGAGGGCCGAGGTGTT...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CAA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGCCGGTTCTGGCGTCTaGTGGCCCAACACCTCGGCC +
Preference number: 5 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEAGSGV*WPNTSA
Trigger: GGCCGAGGTGTTGGGCCACAAGACGCCAGAACCGGC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CAA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGTGGATCTCCACCCTCTaGGGGGCTGCGTCGGTGGCA +
Preference number: 5 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKWISTL*GAASVA
Trigger: TGCCACCGACGCAGCCCCCAAGAGGGTGGAGATCCA...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATTTGATCTCGATGGTCTaGGGGATGCGCTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: TFSWLQAASPVPADAPGDLISMV*GMRSSE
Trigger: CTCAGAGGAGCGCATCCCCAAGACCATCGAGATCAA...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACTTGATCTCGATGGTCTaGGGGATGCGCTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHLISMV*GMRSSE
Trigger: CTCAGAGGAGCGCATCCCCAAGACCATCGAGATCAA...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CAA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTACGATGTTGACCACCTaGCTCAGGCGTTTCATAAAC +
Preference number: 5 (lower is better)
Translates to: CGSSAASPQPRGGRGLITTMLTT*LRRFIN
Trigger: GTTTATGAAACGCCTGAGCAAGGTGGTCAACATCGT...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACACGATGTTGACCACCTaGCTCAGGCGTTTCATAAAC +
Preference number: 5 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHTMLTT*LRRFIN
Trigger: GTTTATGAAACGCCTGAGCAAGGTGGTCAACATCGT...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGACGATGTTGACCACCTaGCTCAGGCGTTTCATAAAC +
Preference number: 5 (lower is better)
Translates to: QPPHNLGEAAASSLTHSETMLTT*LRRFIN
Trigger: GTTTATGAAACGCCTGAGCAAGGTGGTCAACATCGT...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACATGACAGGGACGATGTaGACCACCTTGCTCAGGCGT +
Preference number: 5 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHMTGTM*TTLLRR
Trigger: ACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCAT...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CAA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGTACACGTCGATGCCGTaGGACAGCAGGTCTGCGGTG +
Preference number: 5 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGYTSMP*DSRSAV
Trigger: CACCGCAGACCTGCTGTCCAACGGCATCGACGTGTA...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATAGGATCCTCTTGCCGTaGACCTGGTACTCGTGGTCA +
Preference number: 5 (lower is better)
Translates to: TFSWLQAASPVPADAPGDRILLP*TWYSWS
Trigger: TGACCACGAGTACCAGGTCAACGGCAAGAGGATCCT...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACAGGATCCTCTTGCCGTaGACCTGGTACTCGTGGTCA +
Preference number: 5 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHRILLP*TWYSWS
Trigger: TGACCACGAGTACCAGGTCAACGGCAAGAGGATCCT...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CAA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACTCGATGGTACCCCACTaGGTCTTCCTCCCAAGGATC +
Preference number: 5 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHSMVPH*VFLPRI
Trigger: GATCCTTGGGAGGAAGACCAAGTGGGGTACCATCGA...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CAA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGCGCTGCTGCCCTCGTaGAGGCGCTTCACACGGTAC +
Preference number: 5 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKALLPS*RRFTRY
Trigger: GTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACCTCCACCAGACTCACTaGCTTAGACCTTTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: GSSAASPQPRGGRGLITDLHQTH*LRPFQN
Trigger: GTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAG...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTCGCCACCAAGTGACATaGAGGCTGGGCAGGCCACAT +
Preference number: 5 (lower is better)
Translates to: THTLLLADLLLAASSQPGRHQVT*RLGRPH
Trigger: ATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCG...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACAGGATCAAAGGGGCTTaGTGGTCGCGGAACAAGGAG +
Preference number: 5 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHRIKGA*WSRNKE
Trigger: CTCCTTGTTCCGCGACCACAAAGCCCCTTTGATCCT...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS TCA 90 bp ACACAGTTCTGGGAGTCAAAACGGTGGCTGCGGTTCTCTGCCCTGTaGGCTAAGGAACCTTGGCAGCCTTCCCTGAGCCTCGCTTCTGCC +
Preference number: 5 (lower is better)
Translates to: TQFWESKRWLRFSAL*AKEPWQPSLSLASA
Trigger: GGCAGAAGCGAGGCTCAGGGAAGGCTGCCAAGGTTCCTTAGCTCACAGGGCAGAGAACCGCAGCCACCGTTTTGACTCCCAGAACTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS CCA 90 bp GCAGCCCTACGGCCACCTGCAGGCCTTCCCAGAAACTTGAGCCCATaGGGGCACTTCAGGTCCTATAAACTAACAGATGCTCCCTGTCCC +
Preference number: 5 (lower is better)
Translates to: AALRPPAGLPRNLSP*GHFRSYKLTDAPCP
Trigger: GGGACAGGGAGCATCTGTTAGTTTATAGGACCTGAAGTGCCCCCATGGGCTCAAGTTTCTGGGAAGGCCTGCAGGTGGCCGTAGGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS CCA 90 bp GGCTGTGGGCTCCTCCCAGGCGCATGCATGCACACGCAATGTCACTaGCAATCCGTCCTTGAGGTCAGGGTTGCTGCCCCATTTTACAGA +
Preference number: 5 (lower is better)
Translates to: GCGLLPGACMHTQCH*QSVLEVRVAAPFYR
Trigger: TCTGTAAAATGGGGCAGCAACCCTGACCTCAAGGACGGATTGCCAGTGACATTGCGTGTGCATGCATGCGCCTGGGAGGAGCCCACAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS CCA 90 bp AACAAGGTGGGCCATGTCGCACGGCCCCTGCTCGGCCTCACTCCCTaGAAGAGAGATTCACCATCTGCCTGGTCCAGGTCTTCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: NKVGHVARPLLGLTP*KRDSPSAWSRSSPK
Trigger: TTTTGGAGAAGACCTGGACCAGGCAGATGGTGAATCTCTCTTCCAGGGAGTGAGGCCGAGCAGGGGCCGTGCGACATGGCCCACCTTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590294.6
CDS-3UTR CAA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCTGACTCCTGGGGTTaGACGATGGTGATCTCCGTC +
Preference number: 5 (lower is better)
Translates to: THTLLLADLLLAASSQPGADSWG*TMVISV
Trigger: GACGGAGATCACCATCGTCAAACCCCAGGAGTCAGC...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGGCACCTCGGGGACCTaGGAGGCAGGGGGCTCCATC +
Preference number: 5 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEGTSGT*EAGGSI
Trigger: GATGGAGCCCCCTGCCTCCAAGGTCCCCGAGGTGCC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAATGGATCTCCACCCTCTaGGGGGCTGCGTCGGTGGCA +
Preference number: 5 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEWISTL*GAASVA
Trigger: TGCCACCGACGCAGCCCCCAAGAGGGTGGAGATCCA...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CAA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCAGATTTGAAGAGGGTGTaGATTAAGGTGGATTTACCC +
Preference number: 5 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSDLKRV*IKVDLP
Trigger: GGGTAAATCCACCTTAATCAACACCCTCTTCAAATC...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp GGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACGATTTGAAGAGGGTGTaGATTAAGGTGGATTTACCC +
Preference number: 5 (lower is better)
Translates to: GSSAASPQPRGGRGLITDDLKRV*IKVDLP
Trigger: GGGTAAATCCACCTTAATCAACACCCTCTTCAAATC...GTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CCTGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACGGCTGATTTTGGATTaGAAGAGGGTGTTGATTAAG +
Preference number: 5 (lower is better)
Translates to: PVAPVQPPHNLGEAAASSRLILD*KRVLIK
Trigger: CTTAATCAACACCCTCTTCAAATCCAAAATCAGCCG...TGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTTCCGGGATGCGCTTCTaGCGGTTGATGTTGACCTCC +
Preference number: 5 (lower is better)
Translates to: THTLLLADLLLAASSQPGSGMRF*RLMLTS
Trigger: GGAGGTCAACATCAACCGCAAGAAGCGCATCCCGGA...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGTCCGGGATGCGCTTCTaGCGGTTGATGTTGACCTCC +
Preference number: 5 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGSGMRF*RLMLTS
Trigger: GGAGGTCAACATCAACCGCAAGAAGCGCATCCCGGA...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCACGATGTTGACCACCTaGCTCAGGCGTTTCATAAAC +
Preference number: 5 (lower is better)
Translates to: SAASPQPRGGRGLITDSLTMLTT*LRRFIN
Trigger: GTTTATGAAACGCCTGAGCAAGGTGGTCAACATCGT...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTCTCCCAAGGATCCTCTaGCCGTTGACCTGGTACTCG +
Preference number: 5 (lower is better)
Translates to: THTLLLADLLLAASSQPGLPRIL*PLTWYS
Trigger: CGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAG...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGCTCCCAAGGATCCTCTaGCCGTTGACCTGGTACTCG +
Preference number: 5 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGLPRIL*PLTWYS
Trigger: CGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAG...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGCGCTGCTGCCCTCGTaGAGGCGCTTCACACGGTAC +
Preference number: 5 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEALLPS*RRFTRY
Trigger: GTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGCTCCACCAGACTCACTaGCTTAGACCTTTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: QPPHNLGEAAASSLTHSELHQTH*LRPFQN
Trigger: GTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAG...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCTCCACCAGACTCACTaGCTTAGACCTTTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHLHQTH*LRPFQN
Trigger: GTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGCTACAGCTGGTGCCCTaGCCCCGGCGAAGACTTCCT +
Preference number: 5 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKLQLVP*PRRRLP
Trigger: AGGAAGTCTTCGCCGGGGCAAGGGCACCAGCTGTAG...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS GCA 90 bp AAAGATCTTTTCAAGGCTTCGAAGTCCGAAATGATCCCATCCAGCTaGGCGTTGACCGCGGGGTCCGACATGATGGCTGGTGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: KDLFKASKSEMIPSS*ALTAGSDMMAGGQR
Trigger: CCGCTGCCCACCAGCCATCATGTCGGACCCCGCGGTCAACGCGCAGCTGGATGGGATCATTTCGGACTTCGAAGCCTTGAAAAGATCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000423034.6
CDS-3UTR CAA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGGCGTTCTCCACCTGCTaGGACGAGATGTCAATGGAC +
Preference number: 5 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGAFSTC*DEMSMD
Trigger: GTCCATTGACATCTCGTCCAAGCAGGTGGAGAACGC...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCGCTGACTCCTGGGGTTaGACGATGGTGATCTCCGTC +
Preference number: 5 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSADSWG*TMVISV
Trigger: GACGGAGATCACCATCGTCAAACCCCAGGAGTCAGC...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGGATTTGAAGAGGGTGTaGATTAAGGTGGATTTACCC +
Preference number: 5 (lower is better)
Translates to: QPPHNLGEAAASSLTHSEDLKRV*IKVDLP
Trigger: GGGTAAATCCACCTTAATCAACACCCTCTTCAAATC...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCGATTTGAAGAGGGTGTaGATTAAGGTGGATTTACCC +
Preference number: 5 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLDLKRV*IKVDLP
Trigger: GGGTAAATCCACCTTAATCAACACCCTCTTCAAATC...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACGATTTGAAGAGGGTGTaGATTAAGGTGGATTTACCC +
Preference number: 5 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHDLKRV*IKVDLP
Trigger: GGGTAAATCCACCTTAATCAACACCCTCTTCAAATC...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp GCCACGGCCCACACGTGCCCCCGCCAACCTTCCTTCTGGCACCTTCCATGGCTCCGGCTGATTTTGGATTaGAAGAGGGTGTTGATTAAG +
Preference number: 5 (lower is better)
Translates to: ATAHTCPRQPSFWHLPWLRLILD*KRVLIK
Trigger: CTTAATCAACACCCTCTTCAAATCCAAAATCAGCCG...GAGCCATGGAAGGTGCCAGAAGGAAGGTTGGCGGGGGCACGTGTGGGCCGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp TGTGGCTCCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTCGGCTGATTTTGGATTaGAAGAGGGTGTTGATTAAG +
Preference number: 5 (lower is better)
Translates to: CGSSAASPQPRGGRGLITRLILD*KRVLIK
Trigger: CTTAATCAACACCCTCTTCAAATCCAAAATCAGCCG...AGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGGAGCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CCAGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACCGGCTGATTTTGGATTaGAAGAGGGTGTTGATTAAG +
Preference number: 5 (lower is better)
Translates to: PVQPPHNLGEAAASSLTHRLILD*KRVLIK
Trigger: CTTAATCAACACCCTCTTCAAATCCAAAATCAGCCG...GTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCTCCGGGATGCGCTTCTaGCGGTTGATGTTGACCTCC +
Preference number: 5 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSSGMRF*RLMLTS
Trigger: GGAGGTCAACATCAACCGCAAGAAGCGCATCCCGGA...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGTGAGTGTGTCCGCCTaGGCGATGACAGGGACGATG +
Preference number: 5 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKVSVSA*AMTGTM
Trigger: CATCGTCCCTGTCATCGCCAAGGCGGACACACTCAC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGCGGTGATCCGCTGTTaGAAGTGGACCCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKAVIRC*KWTLSS
Trigger: GGAGGAGAGGGTCCACTTCAAACAGCGGATCACCGC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTAGGATCCTCTTGCCGTaGACCTGGTACTCGTGGTCA +
Preference number: 5 (lower is better)
Translates to: THTLLLADLLLAASSQPGRILLP*TWYSWS
Trigger: TGACCACGAGTACCAGGTCAACGGCAAGAGGATCCT...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp TGCTCTTCAGCTGTGGACTGTGCACCCCTGACGCCCGTTCTCTCCTTTCTAGGGAGGATCCTCTTGCCGTaGACCTGGTACTCGTGGTCA +
Preference number: 5 (lower is better)
Translates to: CSSAVDCAPLTPVLSFLGRILLP*TWYSWS
Trigger: TGACCACGAGTACCAGGTCAACGGCAAGAGGATCCT...CCCTAGAAAGGAGAGAACGGGCGTCAGGGGTGCACAGTCCACAGCTGAAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGGGAGGCCCCTTCCCTaGTTTCCTGGCAGCATGTCG +
Preference number: 5 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEGRPLP*FPGSMS
Trigger: CGACATGCTGCCAGGAAACAAGGGAAGGGGCCTCCC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCTCCACCAGACTCACTaGCTTAGACCTTTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: SAASPQPRGGRGLITDSLLHQTH*LRPFQN
Trigger: GTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTTGCTGCCACGAAACCTaGCTCTTCAGCTGTGGACTG +
Preference number: 5 (lower is better)
Translates to: THTLLLADLLLAASSQPGCCHET*LFSCGL
Trigger: CAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCA...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS TCA 90 bp AACAGATGCTCCCTGTCCCCCACAAAGGGGCTTCTTAAAGCTGAGTaGGTCCCTGATGCAGGCAATGCTAGGAGGACAGTGTCCGGCCAG +
Preference number: 5 (lower is better)
Translates to: NRCSLSPTKGLLKAE*VPDAGNARRTVSGQ
Trigger: CTGGCCGGACACTGTCCTCCTAGCATTGCCTGCATCAGGGACTCACTCAGCTTTAAGAAGCCCCTTTGTGGGGGACAGGGAGCATCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS TCA 90 bp CCCAGGCGCATGCATGCACACGCAATGTCACTGGCAATCCGTCCTTaGGGTCAGGGTTGCTGCCCCATTTTACAGAAGGGAAGACCAAGC +
Preference number: 5 (lower is better)
Translates to: PRRMHAHAMSLAIRP*GQGCCPILQKGRPS
Trigger: GCTTGGTCTTCCCTTCTGTAAAATGGGGCAGCAACCCTGACCTCAAGGACGGATTGCCAGTGACATTGCGTGTGCATGCATGCGCCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS TCA 90 bp GGGAGTGATTTTGTGGGGAATCAGGACCACTGTTCTTCTCAGGGTTaGAAGGGCGAAGAGGCCCAGACAGGTGAAGTGGCCTCCTGCGCA +
Preference number: 5 (lower is better)
Translates to: GSDFVGNQDHCSSQG*KGEEAQTGEVASCA
Trigger: TGCGCAGGAGGCCACTTCACCTGTCTGGGCCTCTTCGCCCTTTCAACCCTGAGAAGAACAGTGGTCCTGATTCCCCACAAAATCACTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS TCA 90 bp GTCTCGACCTCCTCGACCTCAAAAGATCTTTTCAAGGCTTGCAGATaGCGGAACTGCGGCCCAGAGCTGCCAAGTGGCTTGCTCAAGGCC +
Preference number: 5 (lower is better)
Translates to: VSTSSTSKDLFKACR*RNCGPELPSGLLKA
Trigger: GGCCTTGAGCAAGCCACTTGGCAGCTCTGGGCCGCAGTTCCGTCATCTGCAAGCCTTGAAAAGATCTTTTGAGGTCGAGGAGGTCGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588690.6
CDS-3UTR CAA 90 bp CAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCGGAGAATTTCTTCAATCTGTaGCAATCACGAATGCATCCG +
Preference number: 5 (lower is better)
Translates to: QPPHNLGEAAASSLTHSENFFNL*QSRMHP
Trigger: CGGATGCATTCGTGATTGCAACAGATTGAAGAAATT...CTCCGAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS-3UTR CAA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCGCGTTCTCCACCTGCTaGGACGAGATGTCAATGGAC +
Preference number: 5 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSAFSTC*DEMSMD
Trigger: GTCCATTGACATCTCGTCCAAGCAGGTGGAGAACGC...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp TGGTCATTGATGAACTTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTGGAACACCTCGGCCCTCTaGAGCCCGAACCGGGACGGG +
Preference number: 5 (lower is better)
Translates to: WSLMNFMMGCQQFSLLMWNTSAL*SPNRDG
Trigger: CCCGTCCCGGTTCGGGCTCAAGAGGGCCGAGGTGTT...CCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS-3UTR CAA 90 bp TGGTCATTGATGAACTTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTGGGCCGGTTCTGGCGTCTaGTGGCCCAACACCTCGGCC +
Preference number: 5 (lower is better)
Translates to: WSLMNFMMGCQQFSLLMWAGSGV*WPNTSA
Trigger: GGCCGAGGTGTTGGGCCACAAGACGCCAGAACCGGC...CCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS-3UTR CAA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGTGGATCTCCACCCTCTaGGGGGCTGCGTCGGTGGCA +
Preference number: 5 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEWISTL*GAASVA
Trigger: TGCCACCGACGCAGCCCCCAAGAGGGTGGAGATCCA...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp AGTGCAGCCTCCCCACAACCTCGGGGAGGCCGCGGCCTCATCACTGACTCACTCCGGCTGATTTTGGATTaGAAGAGGGTGTTGATTAAG +
Preference number: 5 (lower is better)
Translates to: SAASPQPRGGRGLITDSLRLILD*KRVLIK
Trigger: CTTAATCAACACCCTCTTCAAATCCAAAATCAGCCG...GAGTGAGTCAGTGATGAGGCCGCGGCCTCCCCGAGGTTGTGGGGAGGCTGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCTTGATCTCGATGGTCTaGGGGATGCGCTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSLISMV*GMRSSE
Trigger: CTCAGAGGAGCGCATCCCCAAGACCATCGAGATCAA...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACACGATGTTGACCACCTaGCTCAGGCGTTTCATAAAC +
Preference number: 5 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHTMLTT*LRRFIN
Trigger: GTTTATGAAACGCCTGAGCAAGGTGGTCAACATCGT...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CAA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCATGACAGGGACGATGTaGACCACCTTGCTCAGGCGT +
Preference number: 5 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSMTGTM*TTLLRR
Trigger: ACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCAT...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGTGAGTGTGTCCGCCTaGGCGATGACAGGGACGATG +
Preference number: 5 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEVSVSA*AMTGTM
Trigger: CATCGTCCCTGTCATCGCCAAGGCGGACACACTCAC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGCGGTGATCCGCTGTTaGAAGTGGACCCTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEAVIRC*KWTLSS
Trigger: GGAGGAGAGGGTCCACTTCAAACAGCGGATCACCGC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAATACACGTCGATGCCGTaGGACAGCAGGTCTGCGGTG +
Preference number: 5 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEYTSMP*DSRSAV
Trigger: CACCGCAGACCTGCTGTCCAACGGCATCGACGTGTA...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGCTCCCAAGGATCCTCTaGCCGTTGACCTGGTACTCG +
Preference number: 5 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKLPRIL*PLTWYS
Trigger: CGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAG...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCTGCTGCCACGAAACCTaGCTCTTCAGCTGTGGACTG +
Preference number: 5 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSCCHET*LFSCGL
Trigger: CAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCA...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp TGGTCATTGATGAACTTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTGGGCACCGACTTCCGGCTaGGAGGCAGGGGGCTCCATC +
Preference number: 5 (lower is better)
Translates to: WSLMNFMMGCQQFSLLMWAPTSG*EAGGSI
Trigger: GATGGAGCCCCCTGCCTCCAAGCCGGAAGTCGGTGC...CCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS-3UTR CAA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGCTGACTCCTGGGGTTaGACGATGGTGATCTCCGTC +
Preference number: 5 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEADSWG*TMVISV
Trigger: GACGGAGATCACCATCGTCAAACCCCAGGAGTCAGC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000591198.5
CDS-3UTR CAA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGTTGATCTCGATGGTCTaGGGGATGCGCTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKLISMV*GMRSSE
Trigger: CTCAGAGGAGCGCATCCCCAAGACCATCGAGATCAA...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGAGGATCCTCTTGCCGTaGACCTGGTACTCGTGGTCA +
Preference number: 5 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKRILLP*TWYSWS
Trigger: TGACCACGAGTACCAGGTCAACGGCAAGAGGATCCT...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAACTCCCAAGGATCCTCTaGCCGTTGACCTGGTACTCG +
Preference number: 5 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGELPRIL*PLTWYS
Trigger: CGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAG...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGTCGATGGTACCCCACTaGGTCTTCCTCCCAAGGATC +
Preference number: 5 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKSMVPH*VFLPRI
Trigger: GATCCTTGGGAGGAAGACCAAGTGGGGTACCATCGA...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGGGAGGCCCCTTCCCTaGTTTCCTGGCAGCATGTCG +
Preference number: 5 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEGRPLP*FPGSMS
Trigger: CGACATGCTGCCAGGAAACAAGGGAAGGGGCCTCCC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATCTCCACCAGACTCACTaGCTTAGACCTTTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: TFSWLQAASPVPADAPGDLHQTH*LRPFQN
Trigger: GTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAG...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAACTACAGCCCAGTCTaGGGCCAAACCCAGACACTA +
Preference number: 5 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSNYSPV*GQTQTL
Trigger: TAGTGTCTGGGTTTGGCCCAAGACTGGGCTGTAGTT...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS CCA 90 bp CACGTCTTGTTCCTCACTCGGCATCCCTGGGAGGGAGTGATTTTGTaGGGAATCAGGACCACTGTTCTTCTCAGGGTTGAAAGGGCGAAG +
Preference number: 5 (lower is better)
Translates to: HVLFLTRHPWEGVIL*GIRTTVLLRVERAK
Trigger: CTTCGCCCTTTCAACCCTGAGAAGAACAGTGGTCCTGATTCCCCACAAAATCACTCCCTCCCAGGGATGCCGAGTGAGGAACAAGACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS-3UTR CAA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATGATTTGAAGAGGGTGTaGATTAAGGTGGATTTACCC +
Preference number: 5 (lower is better)
Translates to: TFSWLQAASPVPADAPGDDLKRV*IKVDLP
Trigger: GGGTAAATCCACCTTAATCAACACCCTCTTCAAATC...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACGATTTGAAGAGGGTGTaGATTAAGGTGGATTTACCC +
Preference number: 5 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHDLKRV*IKVDLP
Trigger: GGGTAAATCCACCTTAATCAACACCCTCTTCAAATC...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CAA 90 bp ACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGCCTGCAGATGCACCTGGTGATCGGCTGATTTTGGATTaGAAGAGGGTGTTGATTAAG +
Preference number: 5 (lower is better)
Translates to: TFSWLQAASPVPADAPGDRLILD*KRVLIK
Trigger: CTTAATCAACACCCTCTTCAAATCCAAAATCAGCCG...ATCACCAGGTGCATCTGCAGGCACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CGAAAATGGGGCGTAGACGCTGGGCACCACGGCTCACGTCTGCAATCCCAGCACCGGCTGATTTTGGATTaGAAGAGGGTGTTGATTAAG +
Preference number: 5 (lower is better)
Translates to: RKWGVDAGHHGSRLQSQHRLILD*KRVLIK
Trigger: CTTAATCAACACCCTCTTCAAATCCAAAATCAGCCG...GTGCTGGGATTGCAGACGTGAGCCGTGGTGCCCAGCGTCTACGCCCCATTTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS-3UTR CAA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAATTGATCTCGATGGTCTaGGGGATGCGCTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGELISMV*GMRSSE
Trigger: CTCAGAGGAGCGCATCCCCAAGACCATCGAGATCAA...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAATGACAGGGACGATGTaGACCACCTTGCTCAGGCGT +
Preference number: 5 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEMTGTM*TTLLRR
Trigger: ACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCAT...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAAGGATCCTCTTGCCGTaGACCTGGTACTCGTGGTCA +
Preference number: 5 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGERILLP*TWYSWS
Trigger: TGACCACGAGTACCAGGTCAACGGCAAGAGGATCCT...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAATGCTGCCACGAAACCTaGCTCTTCAGCTGTGGACTG +
Preference number: 5 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGECCHET*LFSCGL
Trigger: CAGTCCACAGCTGAAGAGCAAGGTTTCGTGGCAGCA...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGCGCCACCAAGTGACATaGAGGCTGGGCAGGCCACAT +
Preference number: 5 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGERHQVT*RLGRPH
Trigger: ATGTGGCCTGCCCAGCCTCAATGTCACTTGGTGGCG...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTAGCAGTCTCCTTACTTaGCCTCGTAACAATGCACAC +
Preference number: 5 (lower is better)
Translates to: THTLLLADLLLAASSQPGSSLLT*PRNNAH
Trigger: GTGTGCATTGTTACGAGGCAAAGTAAGGAGACTGCT...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS-3UTR CAA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGGCTGACTCCTGGGGTTaGACGATGGTGATCTCCGTC +
Preference number: 5 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGEADSWG*TMVISV
Trigger: GACGGAGATCACCATCGTCAAACCCCAGGAGTCAGC...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
CDS-3UTR CAA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGTCCGGGATGCGCTTCTaGCGGTTGATGTTGACCTCC +
Preference number: 5 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGESGMRF*RLMLTS
Trigger: GGAGGTCAACATCAACCGCAAGAAGCGCATCCCGGA...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGCTCCCAAGGATCCTCTaGCCGTTGACCTGGTACTCG +
Preference number: 5 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGELPRIL*PLTWYS
Trigger: CGAGTACCAGGTCAACGGCAAGAGGATCCTTGGGAG...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp TGGTCATTGATGAACTTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTGGGCTGACTCCTGGGGTTaGACGATGGTGATCTCCGTC +
Preference number: 5 (lower is better)
Translates to: WSLMNFMMGCQQFSLLMWADSWG*TMVISV
Trigger: GACGGAGATCACCATCGTCAAACCCCAGGAGTCAGC...CCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS-3UTR CAA 90 bp ACTCATACACTCCTTCTCGCTGACCTTCTCCTGGCTGCAAGCAGCCAGCCCGGTGATTTGAAGAGGGTGTaGATTAAGGTGGATTTACCC +
Preference number: 5 (lower is better)
Translates to: THTLLLADLLLAASSQPGDLKRV*IKVDLP
Trigger: GGGTAAATCCACCTTAATCAACACCCTCTTCAAATC...ACCGGGCTGGCTGCTTGCAGCCAGGAGAAGGTCAGCGAGAAGGAGTGTATGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGTTGATCTCGATGGTCTaGGGGATGCGCTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGELISMV*GMRSSE
Trigger: CTCAGAGGAGCGCATCCCCAAGACCATCGAGATCAA...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGACGATGTTGACCACCTaGCTCAGGCGTTTCATAAAC +
Preference number: 5 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKTMLTT*LRRFIN
Trigger: GTTTATGAAACGCCTGAGCAAGGTGGTCAACATCGT...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS CCA 90 bp TGTCTCGACCTCCTCGACCTCAAAAGATCTTTTCAAGGCTGTAAATaGGCGCGTTGGACAGATGATCATTTGTTCTCCCTGCGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: CLDLLDLKRSFQGCK*ARWTDDHLFSLRWA
Trigger: TGCCCAGCGCAGGGAGAACAAATGATCATCTGTCCAACGCGCCCATTTACAGCCTTGAAAAGATCTTTTGAGGTCGAGGAGGTCGAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589070.1
CDS-3UTR CAA 90 bp GGAGTCTCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCCGGCTGATTTTGGATTaGAAGAGGGTGTTGATTAAG +
Preference number: 5 (lower is better)
Translates to: GVSSGPSFSPGARQVTGSRLILD*KRVLIK
Trigger: CTTAATCAACACCCTCTTCAAATCCAAAATCAGCCG...GCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGAGACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp TGGTCATTGATGAACTTCATGATGGGCTGCCAGCAGTTCTCGTTGTTGATGTGGTTGATCTCGATGGTCTaGGGGATGCGCTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: WSLMNFMMGCQQFSLLMWLISMV*GMRSSE
Trigger: CTCAGAGGAGCGCATCCCCAAGACCATCGAGATCAA...CCACATCAACAACGAGAACTGCTGGCAGCCCATCATGAAGTTCATCAATGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS-3UTR CAA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAACGATGTTGACCACCTaGCTCAGGCGTTTCATAAAC +
Preference number: 5 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGETMLTT*LRRFIN
Trigger: GTTTATGAAACGCCTGAGCAAGGTGGTCAACATCGT...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGCTCCACCAGACTCACTaGCTTAGACCTTTTCAAAAC +
Preference number: 5 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKLHQTH*LRPFQN
Trigger: GTTTTGAAAAGGTCTAAGCAAGTGAGTCTGGTGGAG...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAAGATCTTTTCAAGGCTaGCAGGAACCAAGACACCAG +
Preference number: 5 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGERSFQG*QEPRHQ
Trigger: CTGGTGTCTTGGTTCCTGCAAGCCTTGAAAAGATCT...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000427674.6
CDS-3UTR CAA 90 bp CGACCTCCTCGACCTCAAAAGATCTTTTCAAGGCTGGGCCACTGGAGTCACCAAGGAGAGAAGCAAGATTaGAAATGCACGGGTCCAGAA +
Preference number: 5 (lower is better)
Translates to: RPPRPQKIFSRLGHWSHQGEKQD*KCTGPE
Trigger: TTCTGGACCCGTGCATTTCAAATCTTGCTTCTCTCC...TTGGTGACTCCAGTGGCCCAGCCTTGAAAAGATCTTTTGAGGTCGAGGAGGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS GCA 90 bp TGGCGCCGGAAAAACGTGCGCAGTGGAGAGAAGCAAGATTTGAAATaGACGGGTCCAGAAGCAAATCTGAGTAAGACTTCTTCATGGTGC +
Preference number: 5 (lower is better)
Translates to: WRRKNVRSGEKQDLK*TGPEANLSKTSSWC
Trigger: GCACCATGAAGAAGTCTTACTCAGATTTGCTTCTGGACCCGTGCATTTCAAATCTTGCTTCTCTCCACTGCGCACGTTTTTCCGGCGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591833.5
ENST00000633211.1
CDS CCA 90 bp GCGCAGAATCAAAAATCACAAGACACGAACATATCCTGCGGTGCCTaGCGCCGGAAAAACGTGCGCAGTGGAGAGAAGCAAGATTTGAAA +
Preference number: 5 (lower is better)
Translates to: AQNQKSQDTNISCGA*RRKNVRSGEKQDLK
Trigger: TTTCAAATCTTGCTTCTCTCCACTGCGCACGTTTTTCCGGCGCCAGGCACCGCAGGATATGTTCGTGTCTTGTGATTTTTGATTCTGCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000591833.5
ENST00000633211.1
CDS-3UTR CAA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGGATTTGAAGAGGGTGTaGATTAAGGTGGATTTACCC +
Preference number: 5 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKDLKRV*IKVDLP
Trigger: GGGTAAATCCACCTTAATCAACACCCTCTTCAAATC...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp TCATCAGGCCCCTCTTTCTCCCCAGGAGCAAGACAGGTAACAGGAAGCAGGAAGCGGCTGATTTTGGATTaGAAGAGGGTGTTGATTAAG +
Preference number: 5 (lower is better)
Translates to: SSGPSFSPGARQVTGSRKRLILD*KRVLIK
Trigger: CTTAATCAACACCCTCTTCAAATCCAAAATCAGCCG...CTTCCTGCTTCCTGTTACCTGTCTTGCTCCTGGGGAGAAAGAGGGGCCTGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS-3UTR CAA 90 bp CCCTTGTTTCCTGGCAGCATGTCGAAGGGGTGGGGAACGATGACAAATGGAGAAGATTTGAAGAGGGTGTaGATTAAGGTGGATTTACCC +
Preference number: 5 (lower is better)
Translates to: PLFPGSMSKGWGTMTNGEDLKRV*IKVDLP
Trigger: GGGTAAATCCACCTTAATCAACACCCTCTTCAAATC...TTCTCCATTTGTCATCGTTCCCCACCCCTTCGACATGCTGCCAGGAAACAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS-3UTR CAA 90 bp GCAAAAACATGGCAAGTTGGCAAAGTAAACTGTCTCACCAGTGGGGGTGGTGAGACGATGTTGACCACCTaGCTCAGGCGTTTCATAAAC +
Preference number: 5 (lower is better)
Translates to: AKTWQVGKVNCLTSGGGETMLTT*LRRFIN
Trigger: GTTTATGAAACGCCTGAGCAAGGTGGTCAACATCGT...CTCACCACCCCCACTGGTGAGACAGTTTACTTTGCCAACTTGCCATGTTTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
CDS TCA 90 bp TGTATCTTGAACAAAACAATTGTAGCAGCACCACCAACTCCATGTTaGCCGCCACTTTTGTATACATCCCAACCACCTGGACAGAGACTG +
Preference number: 5 (lower is better)
Translates to: CILNKTIVAAPPTPC*PPLLYTSQPPGQRL
Trigger: CAGTCTCTGTCCAGGTGGTTGGGATGTATACAAAAGTGGCGGTCAACATGGAGTTGGTGGTGCTGCTACAATTGTTTTGTTCAAGATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587237.1
ENST00000632430.1
CDS CCA 90 bp CTGCTCCTTTTTAATATCCACTTGGAGATGCTTAACTTAGACTCTTaGAAACCAACTCACAGAGTCAAATTCCTGACGACTTCCAAAGTC +
Preference number: 5 (lower is better)
Translates to: LLLFNIHLEMLNLDS*KPTHRVKFLTTSKV
Trigger: GACTTTGGAAGTCGTCAGGAATTTGACTCTGTGAGTTGGTTTCCAAGAGTCTAAGTTAAGCATCTCCAAGTGGATATTAAAAAGGAGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS GCA 90 bp CACTCTTTGTCTGGTCTAATTTCTTCAATCTGTTGCAATCACGAATaGATCCGAATTACCACATTTCCATGTGCTGATCATATGTTTGTG +
Preference number: 5 (lower is better)
Translates to: HSLSGLISSICCNHE*IRITTFPCADHMFV
Trigger: CACAAACATATGATCAGCACATGGAAATGTGGTAATTCGGATGCATTCGTGATTGCAACAGATTGAAGAAATTAGACCAGACAAAGAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS GCA 72 bp CCCTGCGCGCTGGCTGGGGCGCCGCGCCCGCGCTCCTaGAGTGCAGAGCTAGCCGCCGGAGGAGCCCCTAGG +
Preference number: 6 (lower is better)
Translates to: PCALAGAPRPRS*SAELAAGGAPR
Trigger: CCTAGGGGCTCCTCCGGCGGCTAGCTCTGCACTGCAGGAGCGCGGGCGCGGCGCCCCAGCCAGCGCGCAGGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000423034.6
ENST00000590059.5
CDS GCA 72 bp GAGCCGCCTCAGTGGCCCAGCAGCGGAACGTCGGGCTaGGCTGGACGCGCCGAGAGCCGCGGCCCGCCCACC +
Preference number: 6 (lower is better)
Translates to: EPPQWPSSGTSG*AGRAESRGPPT
Trigger: GGTGGGCGGGCCGCGGCTCTCGGCGCGTCCAGCGCAGCCCGACGTTCCGCTGCTGGGCCACTGAGGCGGCTC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586128.5
ENST00000591088.5
ENST00000592481.6
CDS CCA 72 bp GCCTCAGTGGCCCAGCAGCGGAACGTCGGGCTGCGCTaGACGCGCCGAGAGCCGCGGCCCGCCCACCGGGTC +
Preference number: 6 (lower is better)
Translates to: ASVAQQRNVGLR*TRREPRPAHRV
Trigger: GACCCGGTGGGCGGGCCGCGGCTCTCGGCGCGTCCAGCGCAGCCCGACGTTCCGCTGCTGGGCCACTGAGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586128.5
ENST00000591088.5
ENST00000592481.6
CDS GCA 72 bp GGGCCCCGAGGAGTCCGGCAGACCACCGGGTCTGCCTaGGAGAGTCCCAGAGTCCCGGCCGCCCGGTCTGGT +
Preference number: 6 (lower is better)
Translates to: GPRGVRQTTGSA*ESPRVPAARSG
Trigger: ACCAGACCGGGCGGCCGGGACTCTGGGACTCTCGCAGGCAGACCCGGTGGTCTGCCGGACTCCTCGGGGCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS CCA 72 bp GGTTCCCGCACCCGCACCGGCCTCCCTGTCTCGCACTaGCTGCTCCGCCCGCCTGTCAAGGCCAGGCCTGGG +
Preference number: 6 (lower is better)
Translates to: GSRTRTGLPVSH*LLRPPVKARPG
Trigger: CCCAGGCCTGGCCTTGACAGGCGGGCGGAGCAGCCAGTGCGAGACAGGGAGGCCGGTGCGGGTGCGGGAACC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000423034.6
CDS CCA 72 bp CAGCTGCGCGTTGACCGCGGGGTCCGACATGATGGCTaGTGGGCAGCGGGTCGCGCGGAGGGCAGCGGCGAG +
Preference number: 6 (lower is better)
Translates to: QLRVDRGVRHDG*WAAGRAEGSGE
Trigger: CTCGCCGCTGCCCTCCGCGCGACCCGCTGCCCACCAGCCATCATGTCGGACCCCGCGGTCAACGCGCAGCTG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423034.6
ENST00000590059.5
CDS GCA 72 bp GTCCCAGAGTCCCGGCCGCCCGGTCTGGTCGGTGGCTaGAGAGGTCCCGAGTGCGGCTTCCGGCAGCCTCCT +
Preference number: 6 (lower is better)
Translates to: VPESRPPGLVGG*RGPECGFRQPP
Trigger: AGGAGGCTGCCGGAAGCCGCACTCGGGACCTCTGCAGCCACCGACCAGACCGGGCGGCCGGGACTCTGGGAC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS GCA 72 bp AAGTGGGCCCCGAGGAGTCCGGCAGACCACCGGGTCTaGCTGCGAGAGTCCCAGAGTCCCGGCCGCCCGGTC +
Preference number: 6 (lower is better)
Translates to: KWAPRSPADHRV*LRESQSPGRPV
Trigger: GACCGGGCGGCCGGGACTCTGGGACTCTCGCAGGCAGACCCGGTGGTCTGCCGGACTCCTCGGGGCCCACTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS CCA 72 bp GAGAGTCCCAGAGTCCCGGCCGCCCGGTCTGGTCGGTaGCTGCAGAGGTCCCGAGTGCGGCTTCCGGCAGCC +
Preference number: 6 (lower is better)
Translates to: ESPRVPAARSGR*LQRSRVRLPAA
Trigger: GGCTGCCGGAAGCCGCACTCGGGACCTCTGCAGCCACCGACCAGACCGGGCGGCCGGGACTCTGGGACTCTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS CCA 72 bp CTGCGCGTTGACCGCGGGGTCCGACATGATGGCTGGTaGGCAGCGGGTCGCGCGGAGGGCAGCGGCGAGGAA +
Preference number: 6 (lower is better)
Translates to: LRVDRGVRHDGW*AAGRAEGSGEE
Trigger: TTCCTCGCCGCTGCCCTCCGCGCGACCCGCTGCCCACCAGCCATCATGTCGGACCCCGCGGTCAACGCGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000423034.6
ENST00000590059.5
CDS CAA 90 bp CGAGGGGCCGGTTCTGGCGTCTTGTGGCCCAACACCTCGGCCCTCTaGAGCCCGAACCGGGACGGGCCGATGGCCCCGGCGTTCTCCACC +
Preference number: 6 (lower is better)
Translates to: RGAGSGVLWPNTSAL*SPNRDGPMAPAFST
Trigger: GGTGGAGAACGCCGGGGCCATCGGCCCGTCCCGGTTCGGGCTCAAGAGGGCCGAGGTGTTGGGCCACAAGACGCCAGAACCGGCCCCTCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000588690.6
ENST00000589140.1
ENST00000590294.6
ENST00000590576.5
ENST00000590586.1
ENST00000590825.1
ENST00000591198.5
ENST00000592098.1
ENST00000592420.1
CDS CCA 72 bp TGCCTGCGAGAGTCCCAGAGTCCCGGCCGCCCGGTCTaGTCGGTGGCTGCAGAGGTCCCGAGTGCGGCTTCC +
Preference number: 6 (lower is better)
Translates to: CLRESQSPGRPV*SVAAEVPSAAS
Trigger: GGAAGCCGCACTCGGGACCTCTGCAGCCACCGACCAGACCGGGCGGCCGGGACTCTGGGACTCTCGCAGGCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329047.13
CDS CAA 72 bp GGTTCTGGCGTCTTGTGGCCCAACACCTCGGCCCTCTaGAGCCCGAACCGGGACGGGCCGATGGCCCCGGCG +
Preference number: 6 (lower is better)
Translates to: GSGVLWPNTSAL*SPNRDGPMAPA
Trigger: CGCCGGGGCCATCGGCCCGTCCCGGTTCGGGCTCAAGAGGGCCGAGGTGTTGGGCCACAAGACGCCAGAACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000588575.1
ENST00000588690.6
ENST00000589140.1
ENST00000590294.6
ENST00000590576.5
ENST00000590586.1
ENST00000590595.1
ENST00000590825.1
ENST00000591198.5
ENST00000592098.1
ENST00000592420.1
CDS CAA 90 bp CGAGGGGCCGGTTCTGGCGTCTTGTGGCCCAACACCTCGGCCCTCTaGAGCCCGAACCGGGACGGGCCGATGGCCCCGGCGTTCTCCACA +
Preference number: 6 (lower is better)
Translates to: RGAGSGVLWPNTSAL*SPNRDGPMAPAFST
Trigger: TGTGGAGAACGCCGGGGCCATCGGCCCGTCCCGGTTCGGGCTCAAGAGGGCCGAGGTGTTGGGCCACAAGACGCCAGAACCGGCCCCTCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588575.1
ENST00000590595.1
CDS TCA 72 bp GTTCTGGCGTCTTGTGGCCCAACACCTCGGCCCTCTTaGGCCCGAACCGGGACGGGCCGATGGCCCCGGCGT +
Preference number: 6 (lower is better)
Translates to: VLASCGPTPRPS*ARTGTGRWPRR
Trigger: ACGCCGGGGCCATCGGCCCGTCCCGGTTCGGGCTCAAGAGGGCCGAGGTGTTGGGCCACAAGACGCCAGAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 18 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000588575.1
ENST00000588690.6
ENST00000589140.1
ENST00000590294.6
ENST00000590576.5
ENST00000590586.1
ENST00000590595.1
ENST00000590825.1
ENST00000591198.5
ENST00000591934.1
ENST00000592098.1
ENST00000592420.1
CDS TCA 72 bp CCTGCCCAGGTCGTGCTGATCGACGACCTCCCGTGGTaGCCTCCAGCTCTCCGGGGCCACCAGGGGGTGTGG +
Preference number: 6 (lower is better)
Translates to: PAQVVLIDDLPW*PPALRGHQGVW
Trigger: CCACACCCCCTGGTGGCCCCGGAGAGCTGGAGGTCACCACGGGAGGTCGTCGATCAGCACGACCTGGGCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS GCA 72 bp TGGGCTGTGTCCGTTCGGTGCTCCCGGCCCACGGGCTaGACAACTTGGCGGCCCCGAAACTGGCGTGGGGGA +
Preference number: 6 (lower is better)
Translates to: WAVSVRCSRPTG*TTWRPRNWRGG
Trigger: TCCCCCACGCCAGTTTCGGGGCCGCCAAGTTGTGCAGCCCGTGGGCCGGGAGCACCGAACGGACACAGCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587514.1
CDS CCA 72 bp CTGGGGGCGGTGGGCGCCTCAGCAGGCTTGGGCATCTaGATCTCCACCCTCTTGGGGGCTGCGTCGGTGGCA +
Preference number: 6 (lower is better)
Translates to: LGAVGASAGLGI*ISTLLGAASVA
Trigger: TGCCACCGACGCAGCCCCCAAGAGGGTGGAGATCCAGATGCCCAAGCCTGCTGAGGCGCCCACCGCCCCCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000588690.6
ENST00000590294.6
ENST00000590595.1
ENST00000591198.5
ENST00000592420.1
CDS CCA 72 bp CATCTCTGGGGGTGTCGGCCATGTCGCCAACGCAGCTaGGAGCCGCCTCAGTGGCCTCCTGGCTCCGGGGTG +
Preference number: 6 (lower is better)
Translates to: HLWGCRPCRQRS*EPPQWPPGSGV
Trigger: CACCCCGGAGCCAGGAGGCCACTGAGGCGGCTCCCAGCTGCGTTGGCGACATGGCCGACACCCCCAGAGATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000588690.6
ENST00000590059.5
ENST00000590294.6
ENST00000591198.5
ENST00000592420.1
CDS CAA 72 bp ACTCAGTCGGAGGTGAGGAACGACCTCCCTATCCCGTaGCCGGGTCCAAGCGGGGCCCGAGAGCCGCCGGGG +
Preference number: 6 (lower is better)
Translates to: TQSEVRNDLPIP*PGPSGAREPPG
Trigger: CCCCGGCGGCTCTCGGGCCCCGCTTGGACCCGGCAACGGGATAGGGAGGTCGTTCCTCACCTCCGACTGAGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587514.1
CDS CAA 90 bp AGCCCGAACCGGGACGGGCCGATGGCCCCGGCGTTCTCCACCTGCTaGGACGAGATGTCAATGGACAGCTCAGTGCGCCGGGACACCGGC +
Preference number: 6 (lower is better)
Translates to: SPNRDGPMAPAFSTC*DEMSMDSSVRRDTG
Trigger: GCCGGTGTCCCGGCGCACTGAGCTGTCCATTGACATCTCGTCCAAGCAGGTGGAGAACGCCGGGGCCATCGGCCCGTCCCGGTTCGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000586812.1
ENST00000587514.1
ENST00000588690.6
ENST00000589070.1
ENST00000589140.1
ENST00000590294.6
ENST00000590576.5
ENST00000590586.1
ENST00000590825.1
ENST00000591198.5
ENST00000591934.1
ENST00000592098.1
ENST00000592420.1
CDS CAA 90 bp CGGCTGTCCACTCAGTCGGAGGTGAGGAACGACCTCCCTATCCCGTaGCCGGGTCCAAGCGGGGCCCGAGAGCCGCCGGGGAGAGCCAAA +
Preference number: 6 (lower is better)
Translates to: RLSTQSEVRNDLPIP*PGPSGAREPPGRAK
Trigger: TTTGGCTCTCCCCGGCGGCTCTCGGGCCCCGCTTGGACCCGGCAACGGGATAGGGAGGTCGTTCCTCACCTCCGACTGAGTGGACAGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587514.1
CDS TCA 72 bp CCGGGGCCTTCTCGTTCCGTGATGCAGGCGCCTGCTTaGGCCCGGCATCTCTGGGGGTGTCGGCCATGTCGC +
Preference number: 6 (lower is better)
Translates to: PGPSRSVMQAPA*ARHLWGCRPCR
Trigger: GCGACATGGCCGACACCCCCAGAGATGCCGGGCTCAAGCAGGCGCCTGCATCACGGAACGAGAAGGCCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 31 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585638.1
ENST00000585929.5
ENST00000585930.5
ENST00000586128.5
ENST00000586433.5
ENST00000586521.5
ENST00000588690.6
ENST00000588958.6
ENST00000589250.6
ENST00000589920.5
ENST00000590059.5
ENST00000590294.6
ENST00000590917.5
ENST00000590938.5
ENST00000591020.5
ENST00000591088.5
ENST00000591198.5
ENST00000591472.6
ENST00000591704.5
ENST00000592420.1
ENST00000592481.6
ENST00000592951.5
ENST00000593189.6
CDS GCA 72 bp ATTCCCAGCCACTCCAGATGCTTCCCGTGGACCAGCTaGACTCCCGGCGGGCATGCCTGGCCCTCCGCAGCC +
Preference number: 6 (lower is better)
Translates to: IPSHSRCFPWTS*TPGGHAWPSAA
Trigger: GGCTGCGGAGGGCCAGGCATGCCCGCCGGGAGTGCAGCTGGTCCACGGGAAGCATCTGGAGTGGCTGGGAAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427674.6
ENST00000592407.1
CDS GCA 72 bp GGCGCTGCTCCTGCGCCCATTCCCAGCCACTCCAGATaGTTCCCGTGGACCAGCTGCACTCCCGGCGGGCAT +
Preference number: 6 (lower is better)
Translates to: GAAPAPIPSHSR*FPWTSCTPGGH
Trigger: ATGCCCGCCGGGAGTGCAGCTGGTCCACGGGAAGCATCTGGAGTGGCTGGGAATGGGCGCAGGAGCAGCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427674.6
ENST00000592407.1
CDS CCA 72 bp GGCCACTGGAGTCACCAAGCCTCCGGAGCCGGCCACTaGAGGTCCGCGTGCCTCCCACCTGGACAGAGACTG +
Preference number: 6 (lower is better)
Translates to: GHWSHQASGAGH*RSACLPPGQRL
Trigger: CAGTCTCTGTCCAGGTGGGAGGCACGCGGACCTCCAGTGGCCGGCTCCGGAGGCTTGGTGACTCCAGTGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431235.6
CDS CCA 72 bp ACGCGCCGAGAGCCGCGGCCCGCCCACCGGGTCACATaGCTCAGAGCCGAGCAGAGGATCAAAGGGGCTTTG +
Preference number: 6 (lower is better)
Translates to: TRREPRPAHRVT*LRAEQRIKGAL
Trigger: CAAAGCCCCTTTGATCCTCTGCTCGGCTCTGAGCCATGTGACCCGGTGGGCGGGCCGCGGCTCTCGGCGCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586128.5
ENST00000591088.5
ENST00000592481.6
CDS CCA 72 bp CATCTCTGGGGGTGTCGGCCATGTCGCCAACGCAGCTaGGAGCCGCCTCAGTGGCCCAGCAGCGGAACGTCG +
Preference number: 6 (lower is better)
Translates to: HLWGCRPCRQRS*EPPQWPSSGTS
Trigger: CGACGTTCCGCTGCTGGGCCACTGAGGCGGCTCCCAGCTGCGTTGGCGACATGGCCGACACCCCCAGAGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586128.5
ENST00000591088.5
ENST00000592481.6
CDS CCA 72 bp GGCCACTGGAGTCACCAAGCCTCCGGAGCCGGCCACTaGAGGTCCGCGTGCCTCCTGTCCTGGCTTGAGCTG +
Preference number: 6 (lower is better)
Translates to: GHWSHQASGAGH*RSACLLSWLEL
Trigger: CAGCTCAAGCCAGGACAGGAGGCACGCGGACCTCCAGTGGCCGGCTCCGGAGGCTTGGTGACTCCAGTGGCC
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590576.5
CDS CCA 72 bp CATCTCTGGGGGTGTCGGCCATGTCGCCAACGCAGCTaGGAGCCGCCTCAGTGGCTGTCCGGGAACCGGGCT +
Preference number: 6 (lower is better)
Translates to: HLWGCRPCRQRS*EPPQWLSGNRA
Trigger: AGCCCGGTTCCCGGACAGCCACTGAGGCGGCTCCCAGCTGCGTTGGCGACATGGCCGACACCCCCAGAGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000590917.5
ENST00000592951.5
CDS CCA 72 bp CATCTCTGGGGGTGTCGGCCATGTCGCCAACGCAGCTaGGAGCCGCCTCAGTGGAGCGGACTGGGCATGGCC +
Preference number: 6 (lower is better)
Translates to: HLWGCRPCRQRS*EPPQWSGLGMA
Trigger: GGCCATGCCCAGTCCGCTCCACTGAGGCGGCTCCCAGCTGCGTTGGCGACATGGCCGACACCCCCAGAGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585929.5
CDS CAA 72 bp GCCTCAGCAGGCTTGGGCATCTGGATCTCCACCCTCTaGGGGGCTGCGTCGGTGGCAGGGGCAGTGGGCACC +
Preference number: 6 (lower is better)
Translates to: ASAGLGIWISTL*GAASVAGAVGT
Trigger: GGTGCCCACTGCCCCTGCCACCGACGCAGCCCCCAAGAGGGTGGAGATCCAGATGCCCAAGCCTGCTGAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000588690.6
ENST00000590294.6
ENST00000590595.1
ENST00000590825.1
ENST00000591198.5
ENST00000592420.1
CDS CAA 90 bp CCGAAGTCCACCGGGGCCTTCTCGTTCCGTGATGCAGGCGCCTGCTaGAGCCCGGCATCTCTGGGGGTGTCGGCCATGTCGCCAACGCAG +
Preference number: 6 (lower is better)
Translates to: PKSTGAFSFRDAGAC*SPASLGVSAMSPTQ
Trigger: CTGCGTTGGCGACATGGCCGACACCCCCAGAGATGCCGGGCTCAAGCAGGCGCCTGCATCACGGAACGAGAAGGCCCCGGTGGACTTCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 31 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585638.1
ENST00000585929.5
ENST00000585930.5
ENST00000586128.5
ENST00000586433.5
ENST00000586521.5
ENST00000588690.6
ENST00000588958.6
ENST00000589250.6
ENST00000589920.5
ENST00000590059.5
ENST00000590294.6
ENST00000590917.5
ENST00000590938.5
ENST00000591020.5
ENST00000591088.5
ENST00000591198.5
ENST00000591472.6
ENST00000591704.5
ENST00000592420.1
ENST00000592481.6
ENST00000592951.5
ENST00000593189.6
CDS CAA 90 bp GGCCCGTGTCCAGGAGAAAGCTGCCGGCATCTACAGCTGGTGCCCTaGCCCCGGCGAAGACTTCCTTGCCTCCATCCACCCCGGCCCAGC +
Preference number: 6 (lower is better)
Translates to: GPCPGESCRHLQLVP*PRRRLPCLHPPRPS
Trigger: GCTGGGCCGGGGTGGATGGAGGCAAGGAAGTCTTCGCCGGGGCAAGGGCACCAGCTGTAGATGCCGGCAGCTTTCTCCTGGACACGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS TCA 72 bp GGCGGGCATGCCTGGCCCTCCGCAGCCTGGCCCATATaGTCTTCACAGGCAGGCCCCTCCTTATGCCCCAGC +
Preference number: 6 (lower is better)
Translates to: GGHAWPSAAWPI*SSQAGPSLCPS
Trigger: GCTGGGGCATAAGGAGGGGCCTGCCTGTGAAGATCATATGGGCCAGGCTGCGGAGGGCCAGGCATGCCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427674.6
ENST00000592407.1
CDS GCA 72 bp TCCACCGGGGCCTTCTCGTTCCGTGATGCAGGCGCCTaGTTGAGCCCGGCATCTCTGGGGGTGTCGGCCATG +
Preference number: 6 (lower is better)
Translates to: STGAFSFRDAGA*LSPASLGVSAM
Trigger: CATGGCCGACACCCCCAGAGATGCCGGGCTCAAGCAGGCGCCTGCATCACGGAACGAGAAGGCCCCGGTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 31 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585638.1
ENST00000585929.5
ENST00000585930.5
ENST00000586128.5
ENST00000586433.5
ENST00000586521.5
ENST00000588690.6
ENST00000588958.6
ENST00000589250.6
ENST00000589920.5
ENST00000590059.5
ENST00000590294.6
ENST00000590917.5
ENST00000590938.5
ENST00000591020.5
ENST00000591088.5
ENST00000591198.5
ENST00000591472.6
ENST00000591704.5
ENST00000592420.1
ENST00000592481.6
ENST00000592951.5
ENST00000593189.6
CDS GCA 72 bp GCCGCCCCGGGAAAGAGACCTGTGCTCCCACGGCGCTaGTCCTGCGCCCATTCCCAGCCACTCCAGATGCTT +
Preference number: 6 (lower is better)
Translates to: AAPGKRPVLPRR*SCAHSQPLQML
Trigger: AAGCATCTGGAGTGGCTGGGAATGGGCGCAGGAGCAGCGCCGTGGGAGCACAGGTCTCTTTCCCGGGGCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427674.6
ENST00000592407.1
CDS GCA 72 bp AAGACACCAGGTGAGCCGCCCCGGGAAAGAGACCTGTaGTCCCACGGCGCTGCTCCTGCGCCCATTCCCAGC +
Preference number: 6 (lower is better)
Translates to: KTPGEPPRERDL*SHGAAPAPIPS
Trigger: GCTGGGAATGGGCGCAGGAGCAGCGCCGTGGGAGCACAGGTCTCTTTCCCGGGGCGGCTCACCTGGTGTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000427674.6
ENST00000592407.1
CDS GCA 72 bp GCGGCACTCACAGGTGTGTCTCCCACCTCCGGCCTCTaGACAGGCGGCCCCACATTCTGGGAGCTCAGCCTC +
Preference number: 6 (lower is better)
Translates to: AALTGVSPTSGL*TGGPTFWELSL
Trigger: GAGGCTGAGCTCCCAGAATGTGGGGCCGCCTGTGCAGAGGCCGGAGGTGGGAGACACACCTGTGAGTGCCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586521.5
CDS GCA 72 bp CCTGCGCTGGGCACCGTGCGCAGCTCGGTGTATCGGTaGAGCGGGGCAGACACAGGGAGCCGCCCTTTACAA +
Preference number: 6 (lower is better)
Translates to: PALGTVRSSVYR*SGADTGSRPLQ
Trigger: TTGTAAAGGGCGGCTCCCTGTGTCTGCCCCGCTGCACCGATACACCGAGCTGCGCACGGTGCCCAGCGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589070.1
ENST00000633557.1
CDS GCA 72 bp CAAGGAGCCACGTCTGGAAGTCAGCGGGCCGGCATCTaGCGGGCAGGCCTCTGTCACACAGGCACAGCGTCC +
Preference number: 6 (lower is better)
Translates to: QGATSGSQRAGI*RAGLCHTGTAS
Trigger: GGACGCTGTGCCTGTGTGACAGAGGCCTGCCCGGCAGATGCCGGCCCGCTGACTTCCAGACGTGGCTCCTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591934.1
CDS CCA 72 bp CCCCGGCGTTCTCCACCTGCTTGGACGAGATGTCAATaGACAGCTCAGTGCGCCGGGACACCGGCTCGGCCG +
Preference number: 6 (lower is better)
Translates to: PRRSPPAWTRCQ*TAQCAGTPARP
Trigger: CGGCCGAGCCGGTGTCCCGGCGCACTGAGCTGTCCATTGACATCTCGTCCAAGCAGGTGGAGAACGCCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000586812.1
ENST00000587514.1
ENST00000588690.6
ENST00000589070.1
ENST00000589140.1
ENST00000590294.6
ENST00000590576.5
ENST00000590586.1
ENST00000590825.1
ENST00000591198.5
ENST00000591934.1
ENST00000592098.1
ENST00000592420.1
CDS CCA 72 bp GGGACGGGCCGATGGCCCCGGCGTTCTCCACCTGCTTaGACGAGATGTCAATGGACAGCTCAGTGCGCCGGG +
Preference number: 6 (lower is better)
Translates to: GTGRWPRRSPPA*TRCQWTAQCAG
Trigger: CCCGGCGCACTGAGCTGTCCATTGACATCTCGTCCAAGCAGGTGGAGAACGCCGGGGCCATCGGCCCGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000586812.1
ENST00000587514.1
ENST00000588690.6
ENST00000589070.1
ENST00000589140.1
ENST00000590294.6
ENST00000590576.5
ENST00000590586.1
ENST00000590825.1
ENST00000591198.5
ENST00000591934.1
ENST00000592098.1
ENST00000592420.1
CDS CCA 72 bp ATCTCCGTCCTCCGAGGGGCCGGTTCTGGCGTCTTGTaGCCCAACACCTCGGCCCTCTTGAGCCCGAACCGG +
Preference number: 6 (lower is better)
Translates to: ISVLRGAGSGVL*PNTSALLSPNR
Trigger: CCGGTTCGGGCTCAAGAGGGCCGAGGTGTTGGGCCACAAGACGCCAGAACCGGCCCCTCGGAGGACGGAGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000588575.1
ENST00000588690.6
ENST00000589140.1
ENST00000590294.6
ENST00000590576.5
ENST00000590586.1
ENST00000590595.1
ENST00000590825.1
ENST00000591198.5
ENST00000592098.1
ENST00000592420.1
CDS CAA 72 bp CGGGACGGGCCGATGGCCCCGGCGTTCTCCACCTGCTaGGACGAGATGTCAATGGACAGCTCAGTGCGCCGG +
Preference number: 6 (lower is better)
Translates to: RDGPMAPAFSTC*DEMSMDSSVRR
Trigger: CCGGCGCACTGAGCTGTCCATTGACATCTCGTCCAAGCAGGTGGAGAACGCCGGGGCCATCGGCCCGTCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000586812.1
ENST00000587514.1
ENST00000588690.6
ENST00000589070.1
ENST00000589140.1
ENST00000590294.6
ENST00000590576.5
ENST00000590586.1
ENST00000590825.1
ENST00000591198.5
ENST00000591934.1
ENST00000592098.1
ENST00000592420.1
CDS CAA 90 bp TTGACGATGGTGATCTCCGTCCTCCGAGGGGCCGGTTCTGGCGTCTaGTGGCCCAACACCTCGGCCCTCTTGAGCCCGAACCGGGACGGG +
Preference number: 6 (lower is better)
Translates to: LTMVISVLRGAGSGV*WPNTSALLSPNRDG
Trigger: CCCGTCCCGGTTCGGGCTCAAGAGGGCCGAGGTGTTGGGCCACAAGACGCCAGAACCGGCCCCTCGGAGGACGGAGATCACCATCGTCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000588575.1
ENST00000588690.6
ENST00000589140.1
ENST00000590294.6
ENST00000590576.5
ENST00000590586.1
ENST00000590595.1
ENST00000590825.1
ENST00000591198.5
ENST00000592098.1
ENST00000592420.1
CDS TCA 72 bp CACGTAGCCGAAGTCCACCGGGGCCTTCTCGTTCCGTaGTGCAGGCGCCTGCTTGAGCCCGGCATCTCTGGG +
Preference number: 6 (lower is better)
Translates to: HVAEVHRGLLVP*CRRLLEPGISG
Trigger: CCCAGAGATGCCGGGCTCAAGCAGGCGCCTGCATCACGGAACGAGAAGGCCCCGGTGGACTTCGGCTACGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 31 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585638.1
ENST00000585929.5
ENST00000585930.5
ENST00000586128.5
ENST00000586433.5
ENST00000586521.5
ENST00000588690.6
ENST00000588958.6
ENST00000589250.6
ENST00000589920.5
ENST00000590059.5
ENST00000590294.6
ENST00000590917.5
ENST00000590938.5
ENST00000591020.5
ENST00000591088.5
ENST00000591198.5
ENST00000591472.6
ENST00000591704.5
ENST00000592420.1
ENST00000592481.6
ENST00000592951.5
ENST00000593189.6
CDS GCA 72 bp CCTGTCAGCCTTCCAGGCCCGTGTCCAGGAGAAAGCTaGCGGCATCTACAGCTGGTGCCCTTGCCCCGGCGA +
Preference number: 6 (lower is better)
Translates to: PVSLPGPCPGES*RHLQLVPLPRR
Trigger: TCGCCGGGGCAAGGGCACCAGCTGTAGATGCCGGCAGCTTTCTCCTGGACACGGGCCTGGAAGGCTGACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS GCA 72 bp ATGCTTCCCGTGGACCAGCTGCACTCCCGGCGGGCATaGCTGGCCCTCCGCAGCCTGGCCCATATGATCTTC +
Preference number: 6 (lower is better)
Translates to: MLPVDQLHSRRA*LALRSLAHMIF
Trigger: GAAGATCATATGGGCCAGGCTGCGGAGGGCCAGGCATGCCCGCCGGGAGTGCAGCTGGTCCACGGGAAGCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427674.6
ENST00000592407.1
CDS GCA 72 bp CCGGGAAAGAGACCTGTGCTCCCACGGCGCTGCTCCTaGGCCCATTCCCAGCCACTCCAGATGCTTCCCGTG +
Preference number: 6 (lower is better)
Translates to: PGKRPVLPRRCS*AHSQPLQMLPV
Trigger: CACGGGAAGCATCTGGAGTGGCTGGGAATGGGCGCAGGAGCAGCGCCGTGGGAGCACAGGTCTCTTTCCCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000427674.6
ENST00000592407.1
CDS GCA 72 bp AAGGCTGTCACAGTGGCAGCCACGGAAGGCGAGGGCTaGTGGGCTGCCTCTCCCTCTCCTTGGGGCCAAAGC +
Preference number: 6 (lower is better)
Translates to: KAVTVAATEGEG*WAASPSPWGQS
Trigger: GCTTTGGCCCCAAGGAGAGGGAGAGGCAGCCCAGCAGCCCTCGCCTTCCGTGGCTGCCACTGTGACAGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS GCA 72 bp GGGATTCTCCCCGGGGTCTGTGGACCTCCAAACAGGTaGCCCTCCACCTTGCCTGCACCTCTGCAGGTGGGC +
Preference number: 6 (lower is better)
Translates to: GILPGVCGPPNR*PSTLPAPLQVG
Trigger: GCCCACCTGCAGAGGTGCAGGCAAGGTGGAGGGGCACCTGTTTGGAGGTCCACAGACCCCGGGGAGAATCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS CCA 72 bp GAGGCAGGGGGCTCCATCCTCCGGTGGGCTGACTCCTaGGGTTTGACGATGGTGATCTCCGTCCTCCGAGGG +
Preference number: 6 (lower is better)
Translates to: EAGGSILRWADS*GLTMVISVLRG
Trigger: CCCTCGGAGGACGGAGATCACCATCGTCAAACCCCAGGAGTCAGCCCACCGGAGGATGGAGCCCCCTGCCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000588575.1
ENST00000588690.6
ENST00000590294.6
ENST00000590595.1
ENST00000590825.1
ENST00000591198.5
ENST00000592420.1
CDS CCA 72 bp GGGTGGGCAGGGTGGCGTCTACATCTCCGGGGCTTCTaGCTCCTTCTCCTCCATGCCGTTGGCCATGGCGCT +
Preference number: 6 (lower is better)
Translates to: GWAGWRLHLRGF*LLLLHAVGHGA
Trigger: AGCGCCATGGCCAACGGCATGGAGGAGAAGGAGCCAGAAGCCCCGGAGATGTAGACGCCACCCTGCCCACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000589246.1
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS CCA 72 bp CATCTCTGGGGGTGTCGGCCATGTCGCCAACGCAGCTaGGAGCCGCCTCAGTGGCCTGAGCTCTTCCTCCGA +
Preference number: 6 (lower is better)
Translates to: HLWGCRPCRQRS*EPPQWPELFLR
Trigger: TCGGAGGAAGAGCTCAGGCCACTGAGGCGGCTCCCAGCTGCGTTGGCGACATGGCCGACACCCCCAGAGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000541152.6
ENST00000588958.6
ENST00000589250.6
CDS CCA 72 bp ACGCTCACGCAGCTAACACAGGCAGCAGCCGGAACCTaGAAGCTCCTGGGGTGGGAGCCTGTCCCCTCCCAG +
Preference number: 6 (lower is better)
Translates to: TLTQLTQAAAGT*KLLGWEPVPSQ
Trigger: CTGGGAGGGGACAGGCTCCCACCCCAGGAGCTTCCAGGTTCCGGCTGCTGCCTGTGTTAGCTGCGTGAGCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000593189.6
CDS CCA 72 bp CATCTCTGGGGGTGTCGGCCATGTCGCCAACGCAGCTaGGAGCCGCCTCAGTGGCGGCACTCACAGGTGTGT +
Preference number: 6 (lower is better)
Translates to: HLWGCRPCRQRS*EPPQWRHSQVC
Trigger: ACACACCTGTGAGTGCCGCCACTGAGGCGGCTCCCAGCTGCGTTGGCGACATGGCCGACACCCCCAGAGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000586521.5
CDS CCA 72 bp CATCTCTGGGGGTGTCGGCCATGTCGCCAACGCAGCTaGGAGCCGCCTCAGTGGCTGCTCAGACATCGCCAC +
Preference number: 6 (lower is better)
Translates to: HLWGCRPCRQRS*EPPQWLLRHRH
Trigger: GTGGCGATGTCTGAGCAGCCACTGAGGCGGCTCCCAGCTGCGTTGGCGACATGGCCGACACCCCCAGAGATG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591704.5
CDS CCA 72 bp GGCCACTGGAGTCACCAAGCCTCCGGAGCCGGCCACTaGAGGTCCGCGTGCCTCCGTTCCAATTCCACCTAC +
Preference number: 6 (lower is better)
Translates to: GHWSHQASGAGH*RSACLRSNSTY
Trigger: GTAGGTGGAATTGGAACGGAGGCACGCGGACCTCCAGTGGCCGGCTCCGGAGGCTTGGTGACTCCAGTGGCC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS CAA 72 bp GTGATCTCCGTCCTCCGAGGGGCCGGTTCTGGCGTCTaGTGGCCCAACACCTCGGCCCTCTTGAGCCCGAAC +
Preference number: 6 (lower is better)
Translates to: VISVLRGAGSGV*WPNTSALLSPN
Trigger: GTTCGGGCTCAAGAGGGCCGAGGTGTTGGGCCACAAGACGCCAGAACCGGCCCCTCGGAGGACGGAGATCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000588575.1
ENST00000588690.6
ENST00000589140.1
ENST00000590294.6
ENST00000590576.5
ENST00000590586.1
ENST00000590595.1
ENST00000590825.1
ENST00000591198.5
ENST00000592098.1
ENST00000592420.1
CDS TCA 72 bp CCTCCATGCCGTTGGCCATGGCGCTGCTGCCCTCGTTaGGGCGCTTCACACGGTACGCCTCGAAGTGGATGC +
Preference number: 6 (lower is better)
Translates to: PPCRWPWRCCPR*GASHGTPRSGC
Trigger: GCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCAACGGCATGGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000588690.6
ENST00000589246.1
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS TCA 72 bp CGGGAGCCCTCCTGGGAAAGCTTCCCAAGGCTCTGCTaGGCTCCGGGAACAGGTCCCTACCTGTCCGGGAAC +
Preference number: 6 (lower is better)
Translates to: REPSWESFPRLC*APGTGPYLSGN
Trigger: GTTCCCGGACAGGTAGGGACCTGTTCCCGGAGCTCAGCAGAGCCTTGGGAAGCTTTCCCAGGAGGGCTCCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585929.5
CDS GCA 72 bp AACCGGGACGGGCCGATGGCCCCGGCGTTCTCCACCTaGTTGGACGAGATGTCAATGGACAGCTCAGTGCGC +
Preference number: 6 (lower is better)
Translates to: NRDGPMAPAFST*LDEMSMDSSVR
Trigger: GCGCACTGAGCTGTCCATTGACATCTCGTCCAAGCAGGTGGAGAACGCCGGGGCCATCGGCCCGTCCCGGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 19 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000586812.1
ENST00000587514.1
ENST00000588690.6
ENST00000589070.1
ENST00000589140.1
ENST00000590294.6
ENST00000590576.5
ENST00000590586.1
ENST00000590825.1
ENST00000591198.5
ENST00000591934.1
ENST00000592098.1
ENST00000592420.1
CDS GCA 72 bp CACCAAGCCTCCGGAGCCGGCCACTGGAGGTCCGCGTaGCTCCGTTCCAATTCCACCTACCGCGCAGAATCA +
Preference number: 6 (lower is better)
Translates to: HQASGAGHWRSA*LRSNSTYRAES
Trigger: TGATTCTGCGCGGTAGGTGGAATTGGAACGGAGGCACGCGGACCTCCAGTGGCCGGCTCCGGAGGCTTGGTG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591833.5
CDS CCA 72 bp GACGATGGTGATCTCCGTCCTCCGAGGGGCCGGTTCTaGCGTCTTGTGGCCCAACACCTCGGCCCTCTTGAG +
Preference number: 6 (lower is better)
Translates to: DDGDLRPPRGRF*RLVAQHLGPLE
Trigger: CTCAAGAGGGCCGAGGTGTTGGGCCACAAGACGCCAGAACCGGCCCCTCGGAGGACGGAGATCACCATCGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000588575.1
ENST00000588690.6
ENST00000589140.1
ENST00000590294.6
ENST00000590576.5
ENST00000590586.1
ENST00000590595.1
ENST00000590825.1
ENST00000591198.5
ENST00000592098.1
ENST00000592420.1
CDS CCA 72 bp TGGCTCAGAGCCGAGCAGAGGATCAAAGGGGCTTTGTaGTCGCGGAACAAGGAGCCTCCCAGAGCGCGGGGC +
Preference number: 6 (lower is better)
Translates to: WLRAEQRIKGAL*SRNKEPPRARG
Trigger: GCCCCGCGCTCTGGGAGGCTCCTTGTTCCGCGACCACAAAGCCCCTTTGATCCTCTGCTCGGCTCTGAGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586128.5
ENST00000591088.5
ENST00000592481.6
CDS CCA 72 bp GTCGGGCTGGCAGGTGTGGGTTTGCGTCCACAGAGCTaGGCAGGAAGGACGTGCACGGCTGGCAAAGGTCAG +
Preference number: 6 (lower is better)
Translates to: VGLAGVGLRPQS*AGRTCTAGKGQ
Trigger: CTGACCTTTGCCAGCCGTGCACGTCCTTCCTGCCCAGCTCTGTGGACGCAAACCCACACCTGCCAGCCCGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS CAA 72 bp GGGGTCTGTGGACCTCCAAACAGGTGCCCCTCCACCTaGCCTGCACCTCTGCAGGTGGGCACAGCTGCCATG +
Preference number: 6 (lower is better)
Translates to: GVCGPPNRCPST*PAPLQVGTAAM
Trigger: CATGGCAGCTGTGCCCACCTGCAGAGGTGCAGGCAAGGTGGAGGGGCACCTGTTTGGAGGTCCACAGACCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS CAA 90 bp GGCTCCTTCTCCTCCATGCCGTTGGCCATGGCGCTGCTGCCCTCGTaGAGGCGCTTCACACGGTACGCCTCGAAGTGGATGCTGCTGGTG +
Preference number: 6 (lower is better)
Translates to: GSFSSMPLAMALLPS*RRFTRYASKWMLLV
Trigger: CACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGAAGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000588690.6
ENST00000589246.1
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS CAA 90 bp GGCGTCTACATCTCCGGGGCTTCTGGCTCCTTCTCCTCCATGCCGTaGGCCATGGCGCTGCTGCCCTCGTTGAGGCGCTTCACACGGTAC +
Preference number: 6 (lower is better)
Translates to: GVYISGASGSFSSMP*AMALLPSLRRFTRY
Trigger: GTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCAACGGCATGGAGGAGAAGGAGCCAGAAGCCCCGGAGATGTAGACGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000589246.1
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS TCA 72 bp GACCTTGGAGGCAGGGGGCTCCATCCTCCGGTGGGCTaGCTCCTGGGGTTTGACGATGGTGATCTCCGTCCT +
Preference number: 6 (lower is better)
Translates to: DLGGRGLHPPVG*LLGFDDGDLRP
Trigger: AGGACGGAGATCACCATCGTCAAACCCCAGGAGTCAGCCCACCGGAGGATGGAGCCCCCTGCCTCCAAGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000588690.6
ENST00000590294.6
ENST00000590595.1
ENST00000590825.1
ENST00000591198.5
ENST00000592420.1
CDS TCA 72 bp TGGGGATCAGAGCAGCTCTCGCAGTGGCTTGCAGCCTaGCAACGCGGCGTGAGCCATGCCCTGAGATCCGGT +
Preference number: 6 (lower is better)
Translates to: WGSEQLSQWLAA*QRGVSHALRSG
Trigger: ACCGGATCTCAGGGCATGGCTCACGCCGCGTTGTCAGGCTGCAAGCCACTGCGAGAGCTGCTCTGATCCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591934.1
CDS GCA 72 bp AACCAGGGCTTGCCCTCCCCGCTCCCACACAGAGCCTaGTCTCTGCGTCCAGACAGTCTCCCCACGATGGTA +
Preference number: 6 (lower is better)
Translates to: NQGLPSPLPHRA*SLRPDSLPTMV
Trigger: TACCATCGTGGGGAGACTGTCTGGACGCAGAGAGCAGGCTCTGTGTGGGAGCGGGGAGGGCAAGCCCTGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS GCA 72 bp CCCCGGCCCAGCGTGGGCCCAGCAGTCTCCTTACTTTaGCTCGTAACAATGCACACTGGAGCAGCCTCCAGC +
Preference number: 6 (lower is better)
Translates to: PRPSVGPAVSLL*LVTMHTGAASS
Trigger: GCTGGAGGCTGCTCCAGTGTGCATTGTTACGAGGCAAAGTAAGGAGACTGCTGGGCCCACGCTGGGCCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS GCA 72 bp CAGGAGAAAGCTGCCGGCATCTACAGCTGGTGCCCTTaGCCCGGCGAAGACTTCCTTGCCTCCATCCACCCC +
Preference number: 6 (lower is better)
Translates to: QEKAAGIYSWCP*PGEDFLASIHP
Trigger: GGGGTGGATGGAGGCAAGGAAGTCTTCGCCGGGGCAAGGGCACCAGCTGTAGATGCCGGCAGCTTTCTCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS GCA 72 bp CCGCTGGAGGCTGTGGGCTCCTCCCAGGCGCATGCATaGACACGCAATGTCACTGGCAATCCGTCCTTGAGG +
Preference number: 6 (lower is better)
Translates to: PLEAVGSSQAHA*TRNVTGNPSLR
Trigger: CCTCAAGGACGGATTGCCAGTGACATTGCGTGTGCATGCATGCGCCTGGGAGGAGCCCACAGCCTCCAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS GCA 72 bp GGAGCCGCTGGAGGCTGTGGGCTCCTCCCAGGCGCATaGATGCACACGCAATGTCACTGGCAATCCGTCCTT +
Preference number: 6 (lower is better)
Translates to: GAAGGCGLLPGA*MHTQCHWQSVL
Trigger: AAGGACGGATTGCCAGTGACATTGCGTGTGCATGCATGCGCCTGGGAGGAGCCCACAGCCTCCAGCGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS GCA 72 bp GCATGCTTGGGGATCAGAGCAGCTCTCGCAGTGGCTTaGAGCCTGACAACGCGGCGTGAGCCATGCCCTGAG +
Preference number: 6 (lower is better)
Translates to: ACLGIRAALAVA*SLTTRREPCPE
Trigger: CTCAGGGCATGGCTCACGCCGCGTTGTCAGGCTGCAAGCCACTGCGAGAGCTGCTCTGATCCCCAAGCATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591934.1
CDS CCA 72 bp GGCCACTGGAGTCACCAAGCCTCCGGAGCCGGCCACTaGAGGTCCGCGTGCCTCCTGAGTAAGACTTCTTCA +
Preference number: 6 (lower is better)
Translates to: GHWSHQASGAGH*RSACLLSKTSS
Trigger: TGAAGAAGTCTTACTCAGGAGGCACGCGGACCTCCAGTGGCCGGCTCCGGAGGCTTGGTGACTCCAGTGGCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427177.6
CDS CCA 72 bp CATCTCTGGGGGTGTCGGCCATGTCGCCAACGCAGCTaGGAGCCGCCTCAGTGGCTTGTCTGTCACTGCCAA +
Preference number: 6 (lower is better)
Translates to: HLWGCRPCRQRS*EPPQWLVCHCQ
Trigger: TTGGCAGTGACAGACAAGCCACTGAGGCGGCTCCCAGCTGCGTTGGCGACATGGCCGACACCCCCAGAGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS CCA 72 bp TCAGCGAGAGAGTCCAGCGCTCCAAAGGGGACTTTCTaGCCCTCCGTGCCCCCTAACCCAGCACTTCTGGGG +
Preference number: 6 (lower is better)
Translates to: SARESSAPKGTF*PSVPPNPALLG
Trigger: CCCCAGAAGTGCTGGGTTAGGGGGCACGGAGGGCCAGAAAGTCCCCTTTGGAGCGCTGGACTCTCTCGCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000431235.6
ENST00000449803.6
ENST00000587237.1
ENST00000632430.1
ENST00000633175.1
CDS CCA 72 bp GGCCACTGGAGTCACCAAGCCTCCGGAGCCGGCCACTaGAGGTCCGCGTGCCTCCAGAATTCCTGTGTATCT +
Preference number: 6 (lower is better)
Translates to: GHWSHQASGAGH*RSACLQNSCVS
Trigger: AGATACACAGGAATTCTGGAGGCACGCGGACCTCCAGTGGCCGGCTCCGGAGGCTTGGTGACTCCAGTGGCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587237.1
CDS CCA 72 bp ACTTCCGGCTTGGAGGCAGGGGGCTCCATCCTCCGGTaGGCTGACTCCTGGGGTTTGACGATGGTGATCTCC +
Preference number: 6 (lower is better)
Translates to: TSGLEAGGSILR*ADSWGLTMVIS
Trigger: GGAGATCACCATCGTCAAACCCCAGGAGTCAGCCCACCGGAGGATGGAGCCCCCTGCCTCCAAGCCGGAAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS CCA 72 bp GCCACAAGTCCCTCAGGAAGCCTCTTCCCCAAAGAGTaGCTGTGGGACGCTGGGAGCCTCCAGGGTGGTCAG +
Preference number: 6 (lower is better)
Translates to: ATSPSGSLFPKE*LWDAGSLQGGQ
Trigger: CTGACCACCCTGGAGGCTCCCAGCGTCCCACAGCCACTCTTTGGGGAAGAGGCTTCCTGAGGGACTTGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585929.5
ENST00000590917.5
ENST00000592951.5
CDS CCA 72 bp TCCTCCCCATGGCTCCTCCTCAGGCCAGAGCATGCTTaGGGATCAGAGCAGCTCTCGCAGTGGCTTGCAGCC +
Preference number: 6 (lower is better)
Translates to: SSPWLLLRPEHA*GSEQLSQWLAA
Trigger: GGCTGCAAGCCACTGCGAGAGCTGCTCTGATCCCCAAGCATGCTCTGGCCTGAGGAGGAGCCATGGGGAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591934.1
CDS CCA 72 bp GCAGGCCTCTGTCACACAGGCACAGCGTCCTCCCCATaGCTCCTCCTCAGGCCAGAGCATGCTTGGGGATCA +
Preference number: 6 (lower is better)
Translates to: AGLCHTGTASSP*LLLRPEHAWGS
Trigger: TGATCCCCAAGCATGCTCTGGCCTGAGGAGGAGCCATGGGGAGGACGCTGTGCCTGTGTGACAGAGGCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591934.1
CDS CCA 72 bp GGCCATGTCGCACGGCCCCTGCTCGGCCTCACTCCCTaGAAGAGAGATTCACCATCTGCCTGGTCCAGGTCT +
Preference number: 6 (lower is better)
Translates to: GHVARPLLGLTP*KRDSPSAWSRS
Trigger: AGACCTGGACCAGGCAGATGGTGAATCTCTCTTCCAGGGAGTGAGGCCGAGCAGGGGCCGTGCGACATGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590294.6
CDS CAA 72 bp TCCTCCATGCCGTTGGCCATGGCGCTGCTGCCCTCGTaGAGGCGCTTCACACGGTACGCCTCGAAGTGGATG +
Preference number: 6 (lower is better)
Translates to: SSMPLAMALLPS*RRFTRYASKWM
Trigger: CATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGGCAGCAGCGCCATGGCCAACGGCATGGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000588690.6
ENST00000589246.1
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS CAA 72 bp CCAGGAGAAAGCTGCCGGCATCTACAGCTGGTGCCCTaGCCCCGGCGAAGACTTCCTTGCCTCCATCCACCC +
Preference number: 6 (lower is better)
Translates to: PGESCRHLQLVP*PRRRLPCLHPP
Trigger: GGGTGGATGGAGGCAAGGAAGTCTTCGCCGGGGCAAGGGCACCAGCTGTAGATGCCGGCAGCTTTCTCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS CAA 72 bp GTCCTCCCCATGGCTCCTCCTCAGGCCAGAGCATGCTaGGGGATCAGAGCAGCTCTCGCAGTGGCTTGCAGC +
Preference number: 6 (lower is better)
Translates to: VLPMAPPQARAC*GIRAALAVACS
Trigger: GCTGCAAGCCACTGCGAGAGCTGCTCTGATCCCCAAGCATGCTCTGGCCTGAGGAGGAGCCATGGGGAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591934.1
CDS CAA 90 bp AGGCACAGCGTCCTCCCCATGGCTCCTCCTCAGGCCAGAGCATGCTaGGGGATCAGAGCAGCTCTCGCAGTGGCTTGCAGCCTGACAACG +
Preference number: 6 (lower is better)
Translates to: RHSVLPMAPPQARAC*GIRAALAVACSLTT
Trigger: CGTTGTCAGGCTGCAAGCCACTGCGAGAGCTGCTCTGATCCCCAAGCATGCTCTGGCCTGAGGAGGAGCCATGGGGAGGACGCTGTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591934.1
CDS CAA 90 bp GCTGCTGGTGGTGGTGACAGGCTTCTTAAAGGGGCCTTGAGACCTTaGACACCGGCAGGGAAGCCACACACTGCACCAGGCCTGGGGGCA +
Preference number: 6 (lower is better)
Translates to: AAGGGDRLLKGALRP*TPAGKPHTAPGLGA
Trigger: TGCCCCCAGGCCTGGTGCAGTGTGTGGCTTCCCTGCCGGTGTCAAAGGTCTCAAGGCCCCTTTAAGAAGCCTGTCACCACCACCAGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000590938.5
CDS TCA 72 bp CATCCAGGGTTCCTCTCACCCAGACACAAAGGCCACTaGAGGCCCCGGGCCAACACCGCTCTGAGGATGACC +
Preference number: 6 (lower is better)
Translates to: HPGFLSPRHKGH*RPRANTALRMT
Trigger: GGTCATCCTCAGAGCGGTGTTGGCCCGGGGCCTTCAGTGGCCTTTGTGTCTGGGTGAGAGGAACCCTGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000431235.6
ENST00000449803.6
ENST00000633175.1
CDS GCA 72 bp CGTGTCCAGGAGAAAGCTGCCGGCATCTACAGCTGGTaGCCTTGCCCCGGCGAAGACTTCCTTGCCTCCATC +
Preference number: 6 (lower is better)
Translates to: RVQEKAAGIYSW*PCPGEDFLASI
Trigger: GATGGAGGCAAGGAAGTCTTCGCCGGGGCAAGGGCACCAGCTGTAGATGCCGGCAGCTTTCTCCTGGACACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS GCA 72 bp GAGACTGTCTTCCCATCTGTCTGGAGCCCCGGCGCCTaGGGCGAGTACCTTCGATGGTACCCCACTTGGTCT +
Preference number: 6 (lower is better)
Translates to: ETVFPSVWSPGA*GEYLRWYPTWS
Trigger: AGACCAAGTGGGGTACCATCGAAGGTACTCGCCGCAGGCGCCGGGGCTCCAGACAGATGGGAAGACAGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589250.6
CDS GCA 72 bp GGTGGATGTCCCTGGCCGTGGTGTCCTCTAAAAAGCTaGCATCCTGCAGCCACGCTGCCTCCCCAGCAAAGC +
Preference number: 6 (lower is better)
Translates to: GGCPWPWCPLKS*HPAATLPPQQS
Trigger: GCTTTGCTGGGGAGGCAGCGTGGCTGCAGGATGGCAGCTTTTTAGAGGACACCACGGCCAGGGACATCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585638.1
ENST00000589920.5
CDS GCA 72 bp AAGGGCGAAGAGGCCCAGACAGGTGAAGTGGCCTCCTaGGCACCATTCCCAGAGGGCAAGGCTGTCACAGTG +
Preference number: 6 (lower is better)
Translates to: KGEEAQTGEVAS*APFPEGKAVTV
Trigger: CACTGTGACAGCCTTGCCCTCTGGGAATGGTGCGCAGGAGGCCACTTCACCTGTCTGGGCCTCTTCGCCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS GCA 72 bp ACTGTCGCAAACGCAATGCTCCGCTGCCAGGTGCATTaGCCTCGGCTATCAGAATCCCTCTGGGCAGGCCGG +
Preference number: 6 (lower is better)
Translates to: TVANAMLRCQVH*PRLSESLWAGR
Trigger: CCGGCCTGCCCAGAGGGATTCTGATAGCCGAGGGCAATGCACCTGGCAGCGGAGCATTGCGTTTGCGACAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590576.5
ENST00000631417.1
CDS GCA 72 bp AAAAGATCTTTTCAAGGCTGGGCTGTGTCCGTTCGGTaGTCCCGGCCCACGGGCTGCACAACTTGGCGGCCC +
Preference number: 6 (lower is better)
Translates to: KRSFQGWAVSVR*SRPTGCTTWRP
Trigger: GGGCCGCCAAGTTGTGCAGCCCGTGGGCCGGGAGCACCGAACGGACACAGCCCAGCCTTGAAAAGATCTTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587514.1
CDS CCA 72 bp GGGTTGAATGGGGACAAGGAGACCCCTCCCTCTGGGTaGGGCAAGGCAGTGGATGAGGTTCCACGAGTCCCT +
Preference number: 6 (lower is better)
Translates to: GLNGDKETPPSG*GKAVDEVPRVP
Trigger: AGGGACTCGTGGAACCTCATCCACTGCCTTGCCCCACCCAGAGGGAGGGGTCTCCTTGTCCCCATTCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589250.6
CDS CCA 72 bp CATGTCGCCAACGCAGCTGGGAGCCGCCTCAGTGGCTaGGGAAGGAACAGCAGAGGAGTTAGAGCGGAACAG +
Preference number: 6 (lower is better)
Translates to: HVANAAGSRLSG*GRNSRGVRAEQ
Trigger: CTGTTCCGCTCTAACTCCTCTGCTGTTCCTTCCCCAGCCACTGAGGCGGCTCCCAGCTGCGTTGGCGACATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589920.5
CDS CCA 72 bp CTCCCTGGACCCCGTGGAGTGGGCAGAACACAGTTCTaGGAGTCAAAACGGTGGCTGCGGTTCTCTGCCCTG +
Preference number: 6 (lower is better)
Translates to: LPGPRGVGRTQF*ESKRWLRFSAL
Trigger: CAGGGCAGAGAACCGCAGCCACCGTTTTGACTCCCAGAACTGTGTTCTGCCCACTCCACGGGGTCCAGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS CCA 72 bp AGGGTTGAAAGGGCGAAGAGGCCCAGACAGGTGAAGTaGCCTCCTGCGCACCATTCCCAGAGGGCAAGGCTG +
Preference number: 6 (lower is better)
Translates to: RVERAKRPRQVK*PPAHHSQRARL
Trigger: CAGCCTTGCCCTCTGGGAATGGTGCGCAGGAGGCCACTTCACCTGTCTGGGCCTCTTCGCCCTTTCAACCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS CCA 72 bp CTGGGAGCCGCCTCAGTGGCTGTCCGGGAACCGGGCTaGCACTCAATAAACAAATCAAAGCTCGGCGCCGGA +
Preference number: 6 (lower is better)
Translates to: LGAASVAVREPG*HSINKSKLGAG
Trigger: TCCGGCGCCGAGCTTTGATTTGTTTATTGAGTGCCAGCCCGGTTCCCGGACAGCCACTGAGGCGGCTCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590917.5
ENST00000592951.5
CDS CCA 72 bp GCGCGTTGGACAGATGATCATTTGTTCTCCCTGCGCTaGGCACCGTGCGCAGCTCGGTGTATCGGTGCAGCG +
Preference number: 6 (lower is better)
Translates to: ARWTDDHLFSLR*APCAARCIGAA
Trigger: CGCTGCACCGATACACCGAGCTGCGCACGGTGCCCAGCGCAGGGAGAACAAATGATCATCTGTCCAACGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589070.1
ENST00000633557.1
CDS CAA 72 bp ACCCCGGCCCAGCGTGGGCCCAGCAGTCTCCTTACTTaGCCTCGTAACAATGCACACTGGAGCAGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: TPAQRGPSSLLT*PRNNAHWSSLQ
Trigger: CTGGAGGCTGCTCCAGTGTGCATTGTTACGAGGCAAAGTAAGGAGACTGCTGGGCCCACGCTGGGCCGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS CAA 72 bp ACATGGCTCAGAGCCGAGCAGAGGATCAAAGGGGCTTaGTGGTCGCGGAACAAGGAGCCTCCCAGAGCGCGG +
Preference number: 6 (lower is better)
Translates to: TWLRAEQRIKGA*WSRNKEPPRAR
Trigger: CCGCGCTCTGGGAGGCTCCTTGTTCCGCGACCACAAAGCCCCTTTGATCCTCTGCTCGGCTCTGAGCCATGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586128.5
ENST00000591088.5
ENST00000592481.6
CDS CAA 72 bp GAGGGAGGAGGGAGGAGAGCAGAGCTGCCCCACGTCTaGTTCCTCACTCGGCATCCCTGGGAGGGAGTGATT +
Preference number: 6 (lower is better)
Translates to: EGGGRRAELPHV*FLTRHPWEGVI
Trigger: AATCACTCCCTCCCAGGGATGCCGAGTGAGGAACAAGACGTGGGGCAGCTCTGCTCTCCTCCCTCCTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS CAA 72 bp GACTGTCGCAAACGCAATGCTCCGCTGCCAGGTGCATaGCCCTCGGCTATCAGAATCCCTCTGGGCAGGCCG +
Preference number: 6 (lower is better)
Translates to: DCRKRNAPLPGA*PSAIRIPLGRP
Trigger: CGGCCTGCCCAGAGGGATTCTGATAGCCGAGGGCAATGCACCTGGCAGCGGAGCATTGCGTTTGCGACAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590576.5
ENST00000631417.1
CDS CAA 72 bp CAAGGAGGCTCAGAGACGCGGACGCCAGACCCAGGCTaGGACAGAGCAGCCCCGCAAGTCCCAACACACTTT +
Preference number: 6 (lower is better)
Translates to: QGGSETRTPDPG*DRAAPQVPTHF
Trigger: AAAGTGTGTTGGGACTTGCGGGGCTGCTCTGTCCAAGCCTGGGTCTGGCGTCCGCGTCTCTGAGCCTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590586.1
CDS GCA 72 bp GAGTTAGAGCGGAACAGGGGCTCACACACAGGCGCCTaGCAGGTGGTTGTCACACCCATCCTTGGATGGGGA +
Preference number: 6 (lower is better)
Translates to: ELERNRGSHTGA*QVVVTPILGWG
Trigger: TCCCCATCCAAGGATGGGTGTGACAACCACCTGGCAGGCGCCTGTGTGTGAGCCCCTGTTCCGCTCTAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589920.5
CDS GCA 72 bp GGTGGACTGTCGCAAACGCAATGCTCCGCTGCCAGGTaGATTGCCCTCGGCTATCAGAATCCCTCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: GGLSQTQCSAAR*IALGYQNPSGQ
Trigger: CTGCCCAGAGGGATTCTGATAGCCGAGGGCAATGCACCTGGCAGCGGAGCATTGCGTTTGCGACAGTCCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590576.5
ENST00000631417.1
CDS CCA 72 bp AATGCCCGCTTCTTCCTTCCACCCAGTAGTGACCCCTaGCTCGCTCACGCTCACGCAGCTAACACAGGCAGC +
Preference number: 6 (lower is better)
Translates to: NARFFLPPSSDP*LAHAHAANTGS
Trigger: GCTGCCTGTGTTAGCTGCGTGAGCGTGAGCGAGCCAGGGGTCACTACTGGGTGGAAGGAAGAAGCGGGCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000593189.6
CDS CCA 72 bp AGCGGAACAGGGGCTCACACACAGGCGCCTGCCAGGTaGTTGTCACACCCATCCTTGGATGGGGAAACTGAG +
Preference number: 6 (lower is better)
Translates to: SGTGAHTQAPAR*LSHPSLDGETE
Trigger: CTCAGTTTCCCCATCCAAGGATGGGTGTGACAACCACCTGGCAGGCGCCTGTGTGTGAGCCCCTGTTCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589920.5
CDS CCA 72 bp CATCTCTGGGGGTGTCGGCCATGTCGCCAACGCAGCTaGGAGCCGCCTCAGTGGATGTACAGAAGAACCAGA +
Preference number: 6 (lower is better)
Translates to: HLWGCRPCRQRS*EPPQWMYRRTR
Trigger: TCTGGTTCTTCTGTACATCCACTGAGGCGGCTCCCAGCTGCGTTGGCGACATGGCCGACACCCCCAGAGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000590938.5
CDS CCA 72 bp CTCCTCCCAGGCGCATGCATGCACACGCAATGTCACTaGCAATCCGTCCTTGAGGTCAGGGTTGCTGCCCCA +
Preference number: 6 (lower is better)
Translates to: LLPGACMHTQCH*QSVLEVRVAAP
Trigger: TGGGGCAGCAACCCTGACCTCAAGGACGGATTGCCAGTGACATTGCGTGTGCATGCATGCGCCTGGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS CAA 90 bp AAGAAGGTGGACTGTCGCAAACGCAATGCTCCGCTGCCAGGTGCATaGCCCTCGGCTATCAGAATCCCTCTGGGCAGGCCGGGGAGATCT +
Preference number: 6 (lower is better)
Translates to: KKVDCRKRNAPLPGA*PSAIRIPLGRPGRS
Trigger: AGATCTCCCCGGCCTGCCCAGAGGGATTCTGATAGCCGAGGGCAATGCACCTGGCAGCGGAGCATTGCGTTTGCGACAGTCCACCTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000590576.5
ENST00000631417.1
CDS TCA 72 bp GATCTTTTCAAGGCTTGCAGGAACCAAGACACCAGGTaGGCCGCCCCGGGAAAGAGACCTGTGCTCCCACGG +
Preference number: 6 (lower is better)
Translates to: DLFKACRNQDTR*AAPGKRPVLPR
Trigger: CCGTGGGAGCACAGGTCTCTTTCCCGGGGCGGCTCACCTGGTGTCTTGGTTCCTGCAAGCCTTGAAAAGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000427674.6
ENST00000592407.1
CDS TCA 72 bp CTCTTTCTCTCCAGCCATCTTCCCGGGAGGCAGCCCTaGATCCTCAGGGTACAAGCACGTCCCCCACAACAG +
Preference number: 6 (lower is better)
Translates to: LFLSSHLPGRQP*ILRVQARPPQQ
Trigger: CTGTTGTGGGGGACGTGCTTGTACCCTGAGGATTCAGGGCTGCCTCCCGGGAAGATGGCTGGAGAGAAAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS TCA 72 bp TTCTCAGGGTTGAAAGGGCGAAGAGGCCCAGACAGGTaGAGTGGCCTCCTGCGCACCATTCCCAGAGGGCAA +
Preference number: 6 (lower is better)
Translates to: FSGLKGRRGPDR*SGLLRTIPRGQ
Trigger: TTGCCCTCTGGGAATGGTGCGCAGGAGGCCACTTCACCTGTCTGGGCCTCTTCGCCCTTTCAACCCTGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS GCA 72 bp GGCTTGTCTGTCACTGCCAATGGTGGCCAAGCAGAATaGAAGGTCATCCTCCTCCTGCCCACGGAGGCCTGT +
Preference number: 6 (lower is better)
Translates to: GLSVTANGGQAE*KVILLLPTEAC
Trigger: ACAGGCCTCCGTGGGCAGGAGGAGGATGACCTTGCATTCTGCTTGGCCACCATTGGCAGTGACAGACAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS GCA 72 bp ACAGGTAACAGCAATCCATTAGCACAGCGTGTGGCCTaGCCTAGCCACGGCACCTTCCTCCACTCTGTGCCC +
Preference number: 6 (lower is better)
Translates to: TGNSNPLAQRVA*PSHGTFLHSVP
Trigger: GGGCACAGAGTGGAGGAAGGTGCCGTGGCTAGGGCAGGCCACACGCTGTGCTAATGGATTGCTGTTACCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591472.6
CDS GCA 72 bp TGGGCATCTTCGAAGTCCGAAATGATCCCATCCAGCTaGGCGTTGACCGCGGGGTCCGACATGATGGCTGGT +
Preference number: 6 (lower is better)
Translates to: WASSKSEMIPSS*ALTAGSDMMAG
Trigger: ACCAGCCATCATGTCGGACCCCGCGGTCAACGCGCAGCTGGATGGGATCATTTCGGACTTCGAAGATGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590059.5
CDS GCA 72 bp AATGGGCGCGTTGGACAGATGATCATTTGTTCTCCCTaGGCTGGGCACCGTGCGCAGCTCGGTGTATCGGTG +
Preference number: 6 (lower is better)
Translates to: NGRVGQMIICSP*AGHRAQLGVSV
Trigger: CACCGATACACCGAGCTGCGCACGGTGCCCAGCGCAGGGAGAACAAATGATCATCTGTCCAACGCGCCCATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000589070.1
ENST00000633557.1
CDS GCA 72 bp GGGCATAAAACAAGGTGGGCCATGTCGCACGGCCCCTaGTCGGCCTCACTCCCTGGAAGAGAGATTCACCAT +
Preference number: 6 (lower is better)
Translates to: GHKTRWAMSHGP*SASLPGREIHH
Trigger: ATGGTGAATCTCTCTTCCAGGGAGTGAGGCCGAGCAGGGGCCGTGCGACATGGCCCACCTTGTTTTATGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590294.6
CDS CCA 72 bp GAGCCGCCTCAGTGGCTTGTCTGTCACTGCCAATGGTaGCCAAGCAGAATGCAAGGTCATCCTCCTCCTGCC +
Preference number: 6 (lower is better)
Translates to: EPPQWLVCHCQW*PSRMQGHPPPA
Trigger: GGCAGGAGGAGGATGACCTTGCATTCTGCTTGGCCACCATTGGCAGTGACAGACAAGCCACTGAGGCGGCTC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS CCA 72 bp GCAGAAGAGGAAAGAAAGGTGTCGGGCTGGCAGGTGTaGGTTTGCGTCCACAGAGCTGGGCAGGAAGGACGT +
Preference number: 6 (lower is better)
Translates to: AEEERKVSGWQV*VCVHRAGQEGR
Trigger: ACGTCCTTCCTGCCCAGCTCTGTGGACGCAAACCCACACCTGCCAGCCCGACACCTTTCTTTCCTCTTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS CCA 72 bp TCCGGGAACAGGTCCCTACCTGTCCGGGAACCGGGCTaGCACTCAATAAACAAATCAAAGCTCGGCGCCGGA +
Preference number: 6 (lower is better)
Translates to: SGNRSLPVREPG*HSINKSKLGAG
Trigger: TCCGGCGCCGAGCTTTGATTTGTTTATTGAGTGCCAGCCCGGTTCCCGGACAGGTAGGGACCTGTTCCCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585929.5
CDS CAA 72 bp GGTGGTGACAGGCTTCTTAAAGGGGCCTTGAGACCTTaGACACCGGCAGGGAAGCCACACACTGCACCAGGC +
Preference number: 6 (lower is better)
Translates to: GGDRLLKGALRP*TPAGKPHTAPG
Trigger: GCCTGGTGCAGTGTGTGGCTTCCCTGCCGGTGTCAAAGGTCTCAAGGCCCCTTTAAGAAGCCTGTCACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590938.5
CDS CAA 72 bp CAAGGCTGTAAATGGGCGCGTTGGACAGATGATCATTaGTTCTCCCTGCGCTGGGCACCGTGCGCAGCTCGG +
Preference number: 6 (lower is better)
Translates to: QGCKWARWTDDH*FSLRWAPCAAR
Trigger: CCGAGCTGCGCACGGTGCCCAGCGCAGGGAGAACAAATGATCATCTGTCCAACGCGCCCATTTACAGCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589070.1
CDS CAA 90 bp CCTTTCTCCTCAATATCGTGCGTGATGGACTTGATCTCGATGGTCTaGGGGATGCGCTCCTCTGAGGTGGGCTGCACCGACTTCCGGCTG +
Preference number: 6 (lower is better)
Translates to: PFSSISCVMDLISMV*GMRSSEVGCTDFRL
Trigger: CAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCCAAGACCATCGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 28 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585638.1
ENST00000585929.5
ENST00000585930.5
ENST00000586128.5
ENST00000586433.5
ENST00000586521.5
ENST00000588690.6
ENST00000588958.6
ENST00000589250.6
ENST00000589920.5
ENST00000590294.6
ENST00000590938.5
ENST00000591020.5
ENST00000591088.5
ENST00000591198.5
ENST00000591472.6
ENST00000591704.5
ENST00000592481.6
ENST00000592951.5
ENST00000593189.6
CDS CAA 90 bp ATAACGGAAGCTGCTGGTGGTGGTGACAGGCTTCTTAAAGGGGCCTaGAGACCTTTGACACCGGCAGGGAAGCCACACACTGCACCAGGC +
Preference number: 6 (lower is better)
Translates to: ITEAAGGGDRLLKGA*RPLTPAGKPHTAPG
Trigger: GCCTGGTGCAGTGTGTGGCTTCCCTGCCGGTGTCAAAGGTCTCAAGGCCCCTTTAAGAAGCCTGTCACCACCACCAGCAGCTTCCGTTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590938.5
CDS CAA 90 bp AGATCTTTTCAAGGAGGCTCAGAGACGCGGACGCCAGACCCAGGCTaGGACAGAGCAGCCCCGCAAGTCCCAACACACTTTGTAAACCCC +
Preference number: 6 (lower is better)
Translates to: RSFQGGSETRTPDPG*DRAAPQVPTHFVNP
Trigger: GGGGTTTACAAAGTGTGTTGGGACTTGCGGGGCTGCTCTGTCCAAGCCTGGGTCTGGCGTCCGCGTCTCTGAGCCTCCTTGAAAAGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590586.1
CDS TCA 72 bp GGACTTGATCTCGATGGTCTTGGGGATGCGCTCCTCTaGGGTGGGCTGCACCGACTTCCGGCTGATTTTGGA +
Preference number: 6 (lower is better)
Translates to: GLDLDGLGDALL*GGLHRLPADFG
Trigger: TCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCCAAGACCATCGAGATCAAGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 28 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585638.1
ENST00000585929.5
ENST00000585930.5
ENST00000586128.5
ENST00000586433.5
ENST00000586521.5
ENST00000588690.6
ENST00000588958.6
ENST00000589250.6
ENST00000589920.5
ENST00000590294.6
ENST00000590938.5
ENST00000591020.5
ENST00000591088.5
ENST00000591198.5
ENST00000591472.6
ENST00000591704.5
ENST00000592481.6
ENST00000592951.5
ENST00000593189.6
CDS GCA 72 bp TTCAAGGCTTCGAAGTCCGAAATGATCCCATCCAGCTaGGCGTTGACCGCGGGGTCCGACATGATGGCTGGT +
Preference number: 6 (lower is better)
Translates to: FKASKSEMIPSS*ALTAGSDMMAG
Trigger: ACCAGCCATCATGTCGGACCCCGCGGTCAACGCGCAGCTGGATGGGATCATTTCGGACTTCGAAGCCTTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000423034.6
CDS GCA 72 bp GGAAGAAGGTGGACTGTCGCAAACGCAATGCTCCGCTaGCAGGTGCATTGCCCTCGGCTATCAGAATCCCTC +
Preference number: 6 (lower is better)
Translates to: GRRWTVANAMLR*QVHCPRLSESL
Trigger: GAGGGATTCTGATAGCCGAGGGCAATGCACCTGGCAGCGGAGCATTGCGTTTGCGACAGTCCACCTTCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590576.5
ENST00000631417.1
CDS GCA 72 bp TGGTTCCAGGAAGAAGGTGGACTGTCGCAAACGCAATaGTCCGCTGCCAGGTGCATTGCCCTCGGCTATCAG +
Preference number: 6 (lower is better)
Translates to: WFQEEGGLSQTQ*SAARCIALGYQ
Trigger: CTGATAGCCGAGGGCAATGCACCTGGCAGCGGAGCATTGCGTTTGCGACAGTCCACCTTCTTCCTGGAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000590576.5
ENST00000631417.1
CDS CCA 72 bp TGGGAGCCGCCTCAGTGGCTTGTCTGTCACTGCCAATaGTGGCCAAGCAGAATGCAAGGTCATCCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: WEPPQWLVCHCQ*WPSRMQGHPPP
Trigger: AGGAGGAGGATGACCTTGCATTCTGCTTGGCCACCATTGGCAGTGACAGACAAGCCACTGAGGCGGCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS CCA 72 bp CAGATCAGTGCAGAAGAGGAAAGAAAGGTGTCGGGCTaGCAGGTGTGGGTTTGCGTCCACAGAGCTGGGCAG +
Preference number: 6 (lower is better)
Translates to: QISAEEERKVSG*QVWVCVHRAGQ
Trigger: CTGCCCAGCTCTGTGGACGCAAACCCACACCTGCCAGCCCGACACCTTTCTTTCCTCTTCTGCACTGATCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS CAA 90 bp CCTTTCTCCTCAATATCGTGCGTGATGGACTTGATCTCGATGGTCTaGGGGATGCGCTCCTCTGAGGTGGGCTGCACCGACTTCCGGCTT +
Preference number: 6 (lower is better)
Translates to: PFSSISCVMDLISMV*GMRSSEVGCTDFRL
Trigger: AAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCCAAGACCATCGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588575.1
CDS CAA 90 bp CCCCACGTCTTGTTCCTCACTCGGCATCCCTGGGAGGGAGTGATTTaGTGGGGAATCAGGACCACTGTTCTTCTCAGGGTTGAAAGGGCG +
Preference number: 6 (lower is better)
Translates to: PHVLFLTRHPWEGVI*WGIRTTVLLRVERA
Trigger: CGCCCTTTCAACCCTGAGAAGAACAGTGGTCCTGATTCCCCACAAAATCACTCCCTCCCAGGGATGCCGAGTGAGGAACAAGACGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS CCA 72 bp CCCTCGTTGAGGCGCTTCACACGGTACGCCTCGAAGTaGATGCTGCTGGTGATGTCCTTGATGTTCTGCATG +
Preference number: 6 (lower is better)
Translates to: PSLRRFTRYASK*MLLVMSLMFCM
Trigger: CATGCAGAACATCAAGGACATCACCAGCAGCATCCACTTCGAGGCGTACCGTGTGAAGCGCCTCAACGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000588690.6
ENST00000589246.1
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS CCA 72 bp ATCCTGCGGTGCCTGGCGCCGGAAAAACGTGCGCAGTaGAGAGAAGCAAGATTTGAAATGCACGGGTCCAGA +
Preference number: 6 (lower is better)
Translates to: ILRCLAPEKRAQ*REARFEMHGSR
Trigger: TCTGGACCCGTGCATTTCAAATCTTGCTTCTCTCCACTGCGCACGTTTTTCCGGCGCCAGGCACCGCAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591833.5
ENST00000633211.1
CDS CAA 72 bp TCAATATCGTGCGTGATGGACTTGATCTCGATGGTCTaGGGGATGCGCTCCTCTGAGGTGGGCTGCACCGAC +
Preference number: 6 (lower is better)
Translates to: SISCVMDLISMV*GMRSSEVGCTD
Trigger: GTCGGTGCAGCCCACCTCAGAGGAGCGCATCCCCAAGACCATCGAGATCAAGTCCATCACGCACGATATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 29 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585638.1
ENST00000585929.5
ENST00000585930.5
ENST00000586128.5
ENST00000586433.5
ENST00000586521.5
ENST00000588575.1
ENST00000588690.6
ENST00000588958.6
ENST00000589250.6
ENST00000589920.5
ENST00000590294.6
ENST00000590938.5
ENST00000591020.5
ENST00000591088.5
ENST00000591198.5
ENST00000591472.6
ENST00000591704.5
ENST00000592481.6
ENST00000592951.5
ENST00000593189.6
CDS CAA 90 bp GTTGGGTGTCTCGACCTCCTCGACCTCAAAAGATCTTTTCAAGGCTaGCAGATGACGGAACTGCGGCCCAGAGCTGCCAAGTGGCTTGCT +
Preference number: 6 (lower is better)
Translates to: VGCLDLLDLKRSFQG*QMTELRPRAAKWLA
Trigger: AGCAAGCCACTTGGCAGCTCTGGGCCGCAGTTCCGTCATCTGCAAGCCTTGAAAAGATCTTTTGAGGTCGAGGAGGTCGAGACACCCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588690.6
CDS CCA 72 bp CGGCCACCTGCAGGCCTTCCCAGAAACTTGAGCCCATaGGGGCACTTCAGGTCCTATAAACTAACAGATGCT +
Preference number: 6 (lower is better)
Translates to: RPPAGLPRNLSP*GHFRSYKLTDA
Trigger: AGCATCTGTTAGTTTATAGGACCTGAAGTGCCCCCATGGGCTCAAGTTTCTGGGAAGGCCTGCAGGTGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427180.5
CDS CAA 72 bp CGGACGCCTTTCTCCTCAATATCGTGCGTGATGGACTaGATCTCGATGGTCTTGGGGATGCGCTCCTCTGAG +
Preference number: 6 (lower is better)
Translates to: RTPFSSISCVMD*ISMVLGMRSSE
Trigger: CTCAGAGGAGCGCATCCCCAAGACCATCGAGATCAAGTCCATCACGCACGATATTGAGGAGAAAGGCGTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 29 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585638.1
ENST00000585929.5
ENST00000585930.5
ENST00000586128.5
ENST00000586433.5
ENST00000586521.5
ENST00000588575.1
ENST00000588690.6
ENST00000588958.6
ENST00000589250.6
ENST00000589920.5
ENST00000590294.6
ENST00000590938.5
ENST00000591020.5
ENST00000591088.5
ENST00000591198.5
ENST00000591472.6
ENST00000591704.5
ENST00000592481.6
ENST00000592951.5
ENST00000593189.6
CDS CAA 72 bp CTCGACCTCCTCGACCTCAAAAGATCTTTTCAAGGCTaGCAGATGACGGAACTGCGGCCCAGAGCTGCCAAG +
Preference number: 6 (lower is better)
Translates to: LDLLDLKRSFQG*QMTELRPRAAK
Trigger: CTTGGCAGCTCTGGGCCGCAGTTCCGTCATCTGCAAGCCTTGAAAAGATCTTTTGAGGTCGAGGAGGTCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588690.6
CDS CAA 90 bp CGCTCCTCTGAGGTGGGCTGCACCGACTTCCGGCTGATTTTGGATTaGAAGAGGGTGTTGATTAAGGTGGATTTACCCAAGCCGCTCTGC +
Preference number: 6 (lower is better)
Translates to: RSSEVGCTDFRLILD*KRVLIKVDLPKPLC
Trigger: GCAGAGCGGCTTGGGTAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTCAGAGGAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 29 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585638.1
ENST00000585929.5
ENST00000585930.5
ENST00000586128.5
ENST00000586433.5
ENST00000586521.5
ENST00000588690.6
ENST00000588958.6
ENST00000589250.6
ENST00000589920.5
ENST00000590059.5
ENST00000590294.6
ENST00000590938.5
ENST00000591020.5
ENST00000591088.5
ENST00000591198.5
ENST00000591472.6
ENST00000591704.5
ENST00000592481.6
ENST00000592951.5
ENST00000593189.6
CDS CAA 90 bp AGATCTTTTCAAGGCTGTAAATGGGCGCGTTGGACAGATGATCATTaGTTCTCCCTGCGCTGGGCACCGTGCGCAGCTCGGTGTATCGGT +
Preference number: 6 (lower is better)
Translates to: RSFQGCKWARWTDDH*FSLRWAPCAARCIG
Trigger: ACCGATACACCGAGCTGCGCACGGTGCCCAGCGCAGGGAGAACAAATGATCATCTGTCCAACGCGCCCATTTACAGCCTTGAAAAGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589070.1
CDS TCA 72 bp CCGATGGCCCCGGCGTTCTCCACAGAGTCAAATTCCTaGCGACTTCCAAAGTCTTTCATTTTCCCTGTCCCG +
Preference number: 6 (lower is better)
Translates to: PMAPAFSTESNS*RLPKSFIFPVP
Trigger: CGGGACAGGGAAAATGAAAGACTTTGGAAGTCGTCAGGAATTTGACTCTGTGGAGAACGCCGGGGCCATCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000588575.1
ENST00000590595.1
CDS CAA 72 bp GTGAGTGTGTCCGCCTTGGCGATGACAGGGACGATGTaGACCACCTTGCTCAGGCGTTTCATAAACTCGATG +
Preference number: 6 (lower is better)
Translates to: VSVSALAMTGTM*TTLLRRFINSM
Trigger: CATCGAGTTTATGAAACGCCTGAGCAAGGTGGTCAACATCGTCCCTGTCATCGCCAAGGCGGACACACTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 19 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000588690.6
ENST00000588958.6
ENST00000589250.6
ENST00000590294.6
ENST00000591088.5
ENST00000591198.5
ENST00000592481.6
ENST00000592951.5
ENST00000593189.6
ENST00000675703.1
CDS TCA 72 bp ATGCATGCACACGCAATGTCACTGGCAATCCGTCCTTaGGGTCAGGGTTGCTGCCCCATTTTACAGAAGGGA +
Preference number: 6 (lower is better)
Translates to: MHAHAMSLAIRP*GQGCCPILQKG
Trigger: TCCCTTCTGTAAAATGGGGCAGCAACCCTGACCTCAAGGACGGATTGCCAGTGACATTGCGTGTGCATGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS CCA 72 bp CAGCCTGGCCAACATGATGAAATCTCGTCTCTTCGATaGTACCCCACTTGGTCTTCCTCCCAAGGATCCTCT +
Preference number: 6 (lower is better)
Translates to: QPGQHDEISSLR*YPTWSSSQGSS
Trigger: AGAGGATCCTTGGGAGGAAGACCAAGTGGGGTACCATCGAAGAGACGAGATTTCATCATGTTGGCCAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592481.6
CDS CAA 72 bp CAGTGTGTGGTGTTTTCAACTTCGATGGTACCCCACTaGGTCTTCCTCCCAAGGATCCTCTTGCCGTTGACC +
Preference number: 6 (lower is better)
Translates to: QCVVFSTSMVPH*VFLPRILLPLT
Trigger: GGTCAACGGCAAGAGGATCCTTGGGAGGAAGACCAAGTGGGGTACCATCGAAGTTGAAAACACCACACACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585930.5
ENST00000586456.1
ENST00000588690.6
ENST00000591088.5
ENST00000591198.5
ENST00000592951.5
CDS CCA 72 bp TCGCTTGATCTCACTTTATGGGATGATCCCATTTTATaGACGAGGAAGCTAAGGCTCACAGAGGAGGAGCCC +
Preference number: 6 (lower is better)
Translates to: SLDLTLWDDPIL*TRKLRLTEEEP
Trigger: GGGCTCCTCCTCTGTGAGCCTTAGCTTCCTCGTCCATAAAATGGGATCATCCCATAAAGTGAGATCAAGCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592420.1
CDS CAA 72 bp GAGGTGGGCTGCACCGACTTCCGGCTGATTTTGGATTaGAAGAGGGTGTTGATTAAGGTGGATTTACCCAAG +
Preference number: 6 (lower is better)
Translates to: EVGCTDFRLILD*KRVLIKVDLPK
Trigger: CTTGGGTAAATCCACCTTAATCAACACCCTCTTCAAATCCAAAATCAGCCGGAAGTCGGTGCAGCCCACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 29 transcripts:
ENST00000329047.13
ENST00000423034.6
ENST00000427177.6
ENST00000427180.5
ENST00000427674.6
ENST00000431235.6
ENST00000449803.6
ENST00000541152.6
ENST00000585638.1
ENST00000585929.5
ENST00000585930.5
ENST00000586128.5
ENST00000586433.5
ENST00000586521.5
ENST00000588690.6
ENST00000588958.6
ENST00000589250.6
ENST00000589920.5
ENST00000590059.5
ENST00000590294.6
ENST00000590938.5
ENST00000591020.5
ENST00000591088.5
ENST00000591198.5
ENST00000591472.6
ENST00000591704.5
ENST00000592481.6
ENST00000592951.5
ENST00000593189.6
CDS CAA 72 bp CTGGAGGTCCGCGTGCCTCCAGAATTCCTGTGTATCTaGAACAAAACAATTGTAGCAGCACCACCAACTCCA +
Preference number: 6 (lower is better)
Translates to: LEVRVPPEFLCI*NKTIVAAPPTP
Trigger: TGGAGTTGGTGGTGCTGCTACAATTGTTTTGTTCAAGATACACAGGAATTCTGGAGGCACGCGGACCTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587237.1
CDS CAA 72 bp CGCCGGAAAAACGTGCGCAGTGGAGAGAAGCAAGATTaGAAATGCACGGGTCCAGAAGCAAATCTGAGTAAG +
Preference number: 6 (lower is better)
Translates to: RRKNVRSGEKQD*KCTGPEANLSK
Trigger: CTTACTCAGATTTGCTTCTGGACCCGTGCATTTCAAATCTTGCTTCTCTCCACTGCGCACGTTTTTCCGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591833.5
ENST00000633211.1
CDS CCA 72 bp CTCCTCGACCTCAAAAGATCTTTTCAAGGCTGTAAATaGGCGCGTTGGACAGATGATCATTTGTTCTCCCTG +
Preference number: 6 (lower is better)
Translates to: LLDLKRSFQGCK*ARWTDDHLFSL
Trigger: CAGGGAGAACAAATGATCATCTGTCCAACGCGCCCATTTACAGCCTTGAAAAGATCTTTTGAGGTCGAGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589070.1
CDS CAA 90 bp GTGTATCTTGAACAAAACAATTGTAGCAGCACCACCAACTCCATGTaGACCGCCACTTTTGTATACATCCCAACCACCTGGACAGAGACT +
Preference number: 6 (lower is better)
Translates to: VYLEQNNCSSTTNSM*TATFVYIPTTWTET
Trigger: AGTCTCTGTCCAGGTGGTTGGGATGTATACAAAAGTGGCGGTCAACATGGAGTTGGTGGTGCTGCTACAATTGTTTTGTTCAAGATACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587237.1
ENST00000632430.1
CDS GCA 72 bp CGACTTCCAAAGTCTTTCATTTTCCCTGTCCCGCGATaGTACGATTTCCTTGGGCTTAAGGGTTTAAAAAGC +
Preference number: 6 (lower is better)
Translates to: RLPKSFIFPVPR*YDFLGLKGLKS
Trigger: GCTTTTTAAACCCTTAAGCCCAAGGAAATCGTAGCATCGCGGGACAGGGAAAATGAAAGACTTTGGAAGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000329047.13
ENST00000588575.1
ENST00000590595.1
CDS GCA 72 bp AAAAACGTGCGCAGTGGAGAGAAGCAAGATTTGAAATaGACGGGTCCAGAAGCAAATCTGAGTAAGACTTCT +
Preference number: 6 (lower is better)
Translates to: KNVRSGEKQDLK*TGPEANLSKTS
Trigger: AGAAGTCTTACTCAGATTTGCTTCTGGACCCGTGCATTTCAAATCTTGCTTCTCTCCACTGCGCACGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000591833.5
ENST00000633211.1
CDS CAA 72 bp GAGGATGCAAAACTTGCACGGAAGAATTCTCTCTACTaGGATATCCTTAAAGTCTCCACGATAAAGCGGTGT +
Preference number: 6 (lower is better)
Translates to: EDAKLARKNSLY*DILKVSTIKRC
Trigger: ACACCGCTTTATCGTGGAGACTTTAAGGATATCCAAGTAGAGAGAATTCTTCCGTGCAAGTTTTGCATCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589070.1
ENST00000633557.1
CDS GCA 72 bp TCTGGTCTAATTTCTTCAATCTGTTGCAATCACGAATaGATCCGAATTACCACATTTCCATGTGCTGATCAT +
Preference number: 6 (lower is better)
Translates to: SGLISSICCNHE*IRITTFPCADH
Trigger: ATGATCAGCACATGGAAATGTGGTAATTCGGATGCATTCGTGATTGCAACAGATTGAAGAAATTAGACCAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000329047.13