Pregenerated sensors for SEPTIN7-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000228878Ensembl transcript IDs: ENST00000412856.6, ENST00000424194.1, ENST00000437235.7, ENST00000658573.1, ENST00000665516.1, ENST00000670426.1
Found 58 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GGACCTCAAAGCCGTCGGGTCAGTAACCAGAAGCCGAGGGGCGGATaGGGCCCCCGCCCTGTGGCACTTTCTCAGTCTGGTTCTTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: GPQSRRVSNQKPRGG*GPRPVALSQSGSSS Trigger: GCTGGAAGAACCAGACTGAGAAAGTGCCACAGGGCGGGGGCCGCATCCGCCCCTCGGCTTCTGGTTACTGACCCGACGGCTTTGAGGTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000665516.1 ENST00000670426.1 |
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| CDS CCA 90 bp | GGGTCAGTAACCAGAAGCCGAGGGGCGGATGCGGCCCCCGCCCTGTaGCACTTTCTCAGTCTGGTTCTTCCAGCCGCGCCTCTTTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: GSVTRSRGADAAPAL*HFLSLVLPAAPLCL Trigger: AAGGCAAAGAGGCGCGGCTGGAAGAACCAGACTGAGAAAGTGCCACAGGGCGGGGGCCGCATCCGCCCCTCGGCTTCTGGTTACTGACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000424194.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS CCA 90 bp | GCCGAGGGGCGGATGCGGCCCCCGCCCTGTGGCACTTTCTCAGTCTaGTTCTTCCAGCCGCGCCTCTTTGCCTTACGCCAATTCCGTAAG | + |
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Preference number: 5 (lower is better) Translates to: AEGRMRPPPCGTFSV*FFQPRLFALRQFRK Trigger: CTTACGGAATTGGCGTAAGGCAAAGAGGCGCGGCTGGAAGAACCAGACTGAGAAAGTGCCACAGGGCGGGGGCCGCATCCGCCCCTCGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000665516.1 |
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| CDS GCA 90 bp | CACTCACAAAGCCGTCGGGTCAGTAACCAGAAGCCGAGGGGCGGATaGGGCCCCCGCCCTGTGGCACTTTCTCAGTCTGGTTCTTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: HSQSRRVSNQKPRGG*GPRPVALSQSGSSS Trigger: GCTGGAAGAACCAGACTGAGAAAGTGCCACAGGGCGGGGGCCGCATCCGCCCCTCGGCTTCTGGTTACTGACCCGACGGCTTTGTGAGTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000412856.6 ENST00000424194.1 ENST00000437235.7 |
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| CDS GCA 90 bp | AATAGTTGTCTCTCAGTATCAGAGGGGATTGGTTCCAGGACCTCCTaGCTCGAAGTGTCTCTTCACTTTCACTCACAAAGCCGTCGGGTC | + |
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Preference number: 5 (lower is better) Translates to: NSCLSVSEGIGSRTS*LEVSLHFHSQSRRV Trigger: GACCCGACGGCTTTGTGAGTGAAAGTGAAGAGACACTTCGAGGCAGGAGGTCCTGGAACCAATCCCCTCTGATACTGAGAGACAACTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412856.6 ENST00000424194.1 ENST00000437235.7 |
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| CDS GCA 90 bp | AGTTGTAGTCTAGGGGAAGTAGACCTTGCAGACCTTGGTGGGGATTaGAGGGACTTAGCAGTACAGTCAGATCTCTCTCTCTCTCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: SCSLGEVDLADLGGD*RDLAVQSDLSLSLS Trigger: AGAGAGAGAGAGAGAGAGATCTGACTGTACTGCTAAGTCCCTGCAATCCCCACCAAGGTCTGCAAGGTCTACTTCCCCTAGACTACAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000665516.1 ENST00000670426.1 |
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| CDS CCA 90 bp | ATTCCCAGGGAAAGGCTCTTTCTGGCTCAATTTGATGTAGCCAAGTaGGTGGTGACTATGGTTGGTCAAGCCTGGATCTCATACTCACCC | + |
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Preference number: 5 (lower is better) Translates to: IPRERLFLAQFDVAK*VVTMVGQAWISYSP Trigger: GGGTGAGTATGAGATCCAGGCTTGACCAACCATAGTCACCACCCACTTGGCTACATCAAATTGAGCCAGAAAGAGCCTTTCCCTGGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS TCA 90 bp | GGTAAGAAGTTCTGTGGCCCTGGTGCCACAGATGACTTGGGACTTTaGCAGGGTTGTGATCGTCCCTATAGGCATGTTTTGTGTCATTAC | + |
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Preference number: 5 (lower is better) Translates to: GKKFCGPGATDDLGL*QGCDRPYRHVLCHY Trigger: GTAATGACACAAAACATGCCTATAGGGACGATCACAACCCTGTCAAAGTCCCAAGTCATCTGTGGCACCAGGGCCACAGAACTTCTTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS TCA 90 bp | TTCTCTGTGCAGGGGATGCATTCCTACATTCTTTCCTACTACAGATaGGCTTGCTCATCTTGCTGTGGAGAGGAAGTGGAGCATGGTCCA | + |
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Preference number: 5 (lower is better) Translates to: FSVQGMHSYILSYYR*ACSSCCGEEVEHGP Trigger: TGGACCATGCTCCACTTCCTCTCCACAGCAAGATGAGCAAGCTCATCTGTAGTAGGAAAGAATGTAGGAATGCATCCCCTGCACAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000665516.1 ENST00000670426.1 |
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| CDS CCA 90 bp | TTCCAAGTGGTAAGAAGTTCTGTGGCCCTGGTGCCACAGATGACTTaGGACTTTGACAGGGTTGTGATCGTCCCTATAGGCATGTTTTGT | + |
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Preference number: 5 (lower is better) Translates to: FQVVRSSVALVPQMT*DFDRVVIVPIGMFC Trigger: ACAAAACATGCCTATAGGGACGATCACAACCCTGTCAAAGTCCCAAGTCATCTGTGGCACCAGGGCCACAGAACTTCTTACCACTTGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS CCA 90 bp | TCATCTTGCTGTGGAGAGGAAGTGGAGCATGGTCCAGACAAGCACTaGTTTTGTCATCGCTGTCTAGTAACATCAGAGAAGAAAGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: SSCCGEEVEHGPDKH*FCHRCLVTSEKKAS Trigger: GGAAGCTTTCTTCTCTGATGTTACTAGACAGCGATGACAAAACCAGTGCTTGTCTGGACCATGCTCCACTTCCTCTCCACAGCAAGATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS GCA 90 bp | CTCTCTCTCTCTCATTCTCTCCTCCGCTTTTCTCTGTGCAGGGGATaGATTCCTACATTCTTTCCTACTACAGATGAGCTTGCTCATCTT | + |
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Preference number: 5 (lower is better) Translates to: LSLSHSLLRFSLCRG*IPTFFPTTDELAHL Trigger: AAGATGAGCAAGCTCATCTGTAGTAGGAAAGAATGTAGGAATGCATCCCCTGCACAGAGAAAAGCGGAGGAGAGAATGAGAGAGAGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000665516.1 ENST00000670426.1 |
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| CDS GCA 90 bp | TCTCTCTCTCTCTCTCTCTCTCATTCTCTCCTCCGCTTTTCTCTGTaGAGGGGATGCATTCCTACATTCTTTCCTACTACAGATGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: SLSLSLSHSLLRFSL*RGCIPTFFPTTDEL Trigger: AAGCTCATCTGTAGTAGGAAAGAATGTAGGAATGCATCCCCTGCACAGAGAAAAGCGGAGGAGAGAATGAGAGAGAGAGAGAGAGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000665516.1 ENST00000670426.1 |
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| CDS CCA 90 bp | TTCCTACATTCTTTCCTACTACAGATGAGCTTGCTCATCTTGCTGTaGAGAGGAAGTGGAGCATGGTCCAGACAAGCACTGGTTTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: FLHSFLLQMSLLILL*RGSGAWSRQALVLS Trigger: TGACAAAACCAGTGCTTGTCTGGACCATGCTCCACTTCCTCTCCACAGCAAGATGAGCAAGCTCATCTGTAGTAGGAAAGAATGTAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS TCA 90 bp | AGTCTACATATAAATTCCCAGGGAAAGGCTCTTTCTGGCTCAATTTaGTGTAGCCAAGTGGGTGGTGACTATGGTTGGTCAAGCCTGGAT | + |
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Preference number: 5 (lower is better) Translates to: SLHINSQGKALSGSI*CSQVGGDYGWSSLD Trigger: ATCCAGGCTTGACCAACCATAGTCACCACCCACTTGGCTACATCAAATTGAGCCAGAAAGAGCCTTTCCCTGGGAATTTATATGTAGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS TCA 90 bp | TGTTGCAATCTCAGCTTTATCTGCCTCAGAGTAAATGGAGCCAGCTaGAATAGGTCTGTAACCCTGCATGGAGATTTGGAGTATACTAGT | + |
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Preference number: 5 (lower is better) Translates to: CCNLSFICLRVNGAS*NRSVTLHGDLEYTS Trigger: ACTAGTATACTCCAAATCTCCATGCAGGGTTACAGACCTATTTCAGCTGGCTCCATTTACTCTGAGGCAGATAAAGCTGAGATTGCAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS CCA 90 bp | CATCTGGAGTCATCGAATGCAGGAACCACAACAAATGGGACTCACTaGTTCTTTGTACCACATATGGGAACACAGCCACAATTTTCTAAA | + |
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Preference number: 5 (lower is better) Translates to: HLESSNAGTTTNGTH*FFVPHMGTQPQFSK Trigger: TTTAGAAAATTGTGGCTGTGTTCCCATATGTGGTACAAAGAACCAGTGAGTCCCATTTGTTGTGGTTCCTGCATTCGATGACTCCAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000412856.6 ENST00000424194.1 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS TCA 90 bp | ACAAATGGGCTGAGGTTTGTACATAATGATTGGTTGAACTGCTTCTaGTGTTGCAATCTCAGCTTTATCTGCCTCAGAGTAAATGGAGCC | + |
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Preference number: 5 (lower is better) Translates to: TNGLRFVHNDWLNCF*CCNLSFICLRVNGA Trigger: GGCTCCATTTACTCTGAGGCAGATAAAGCTGAGATTGCAACATCAGAAGCAGTTCAACCAATCATTATGTACAAACCTCAGCCCATTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS TCA 90 bp | GAGAGTGCATCATCTCCTCATGACTTCAGGTATTTAATCTCCATATaGCTCTCATATATACTTCTCCCAGCCTCTAATCCTCAGGGGATA | + |
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Preference number: 5 (lower is better) Translates to: ESASSPHDFRYLISI*LSYILLPASNPQGI Trigger: TATCCCCTGAGGATTAGAGGCTGGGAGAAGTATATATGAGAGTCATATGGAGATTAAATACCTGAAGTCATGAGGAGATGATGCACTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS TCA 90 bp | ATAGGCTGTCATCAAAGCTCTCTTGGAGAGTGCATCATCTCCTCATaGCTTCAGGTATTTAATCTCCATATGACTCTCATATATACTTCT | + |
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Preference number: 5 (lower is better) Translates to: IGCHQSSLGECIISS*LQVFNLHMTLIYTS Trigger: AGAAGTATATATGAGAGTCATATGGAGATTAAATACCTGAAGTCATGAGGAGATGATGCACTCTCCAAGAGAGCTTTGATGACAGCCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS TCA 90 bp | AATAATTTTGTATATTTATGTACTACACCAATCCTCAGGACACACTaGGGGCTATTTGCTGCAAATACCTACAACATTCTGCTTAGGGTT | + |
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Preference number: 5 (lower is better) Translates to: NNFVYLCTTPILRTH*GLFAANTYNILLRV Trigger: AACCCTAAGCAGAATGTTGTAGGTATTTGCAGCAAATAGCCCTCAGTGTGTCCTGAGGATTGGTGTAGTACATAAATATACAAAATTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS GCA 90 bp | AATATAGGGCCATCCCTTCAGTATTATGTTGCTGAGATTTATCCATaGTCATTAATCCTTAGCAACTACTTAGCATTTTCTTGGATTAAC | + |
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Preference number: 5 (lower is better) Translates to: NIGPSLQYYVAEIYP*SLILSNYLAFSWIN Trigger: GTTAATCCAAGAAAATGCTAAGTAGTTGCTAAGGATTAATGAGCATGGATAAATCTCAGCAACATAATACTGAAGGGATGGCCCTATATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000658573.1 ENST00000670426.1 |
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| CDS CCA 72 bp | ACCAGAAGCCGAGGGGCGGATGCGGCCCCCGCCCTGTaGCACTTTCTCAGTCTGGTTCTTCCAGCCGCGCCT | + |
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Preference number: 6 (lower is better) Translates to: TRSRGADAAPAL*HFLSLVLPAAP Trigger: AGGCGCGGCTGGAAGAACCAGACTGAGAAAGTGCCACAGGGCGGGGGCCGCATCCGCCCCTCGGCTTCTGGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000412856.6 ENST00000424194.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS GCA 72 bp | AGCCGTCGGGTCAGTAACCAGAAGCCGAGGGGCGGATaGGGCCCCCGCCCTGTGGCACTTTCTCAGTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: SRRVSNQKPRGG*GPRPVALSQSG Trigger: ACCAGACTGAGAAAGTGCCACAGGGCGGGGGCCGCATCCGCCCCTCGGCTTCTGGTTACTGACCCGACGGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000424194.1 ENST00000437235.7 ENST00000665516.1 ENST00000670426.1 |
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| CDS CCA 72 bp | CGGATGCGGCCCCCGCCCTGTGGCACTTTCTCAGTCTaGTTCTTCCAGCCGCGCCTCTTTGCCTTACGCCAA | + |
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Preference number: 6 (lower is better) Translates to: RMRPPPCGTFSV*FFQPRLFALRQ Trigger: TTGGCGTAAGGCAAAGAGGCGCGGCTGGAAGAACCAGACTGAGAAAGTGCCACAGGGCGGGGGCCGCATCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000665516.1 ENST00000670426.1 |
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| CDS TCA 72 bp | GCCTCTTTGCCTTACGCCAATTCCGTAAGGAGGCGCTaGGGCCAACTGGCCGGCTCCCGCAGCTCCAAAACT | + |
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Preference number: 6 (lower is better) Translates to: ASLPYANSVRRR*GQLAGSRSSKT Trigger: AGTTTTGGAGCTGCGGGAGCCGGCCAGTTGGCCTCAGCGCCTCCTTACGGAATTGGCGTAAGGCAAAGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000665516.1 |
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| CDS GCA 72 bp | CTAGGGGAAGTAGACCTTGCAGACCTTGGTGGGGATTaGAGGGACTTAGCAGTACAGTCAGATCTCTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: LGEVDLADLGGD*RDLAVQSDLSL Trigger: GAGAGAGAGATCTGACTGTACTGCTAAGTCCCTGCAATCCCCACCAAGGTCTGCAAGGTCTACTTCCCCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000665516.1 ENST00000670426.1 |
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| CDS TCA 72 bp | TTCTGTGGCCCTGGTGCCACAGATGACTTGGGACTTTaGCAGGGTTGTGATCGTCCCTATAGGCATGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: FCGPGATDDLGL*QGCDRPYRHVL Trigger: CAAAACATGCCTATAGGGACGATCACAACCCTGTCAAAGTCCCAAGTCATCTGTGGCACCAGGGCCACAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS GCA 72 bp | CTCTCAGTATCAGAGGGGATTGGTTCCAGGACCTCCTaGCTCGAAGTGTCTCTTCACTTTCACTCACAAAGC | + |
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Preference number: 6 (lower is better) Translates to: LSVSEGIGSRTS*LEVSLHFHSQS Trigger: GCTTTGTGAGTGAAAGTGAAGAGACACTTCGAGGCAGGAGGTCCTGGAACCAATCCCCTCTGATACTGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000412856.6 ENST00000424194.1 ENST00000437235.7 ENST00000658573.1 |
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| CDS CCA 72 bp | GTAGCCAAGTGGGTGGTGACTATGGTTGGTCAAGCCTaGATCTCATACTCACCCTGTAGACTGAAGACTGGT | + |
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Preference number: 6 (lower is better) Translates to: VAKWVVTMVGQA*ISYSPCRLKTG Trigger: ACCAGTCTTCAGTCTACAGGGTGAGTATGAGATCCAGGCTTGACCAACCATAGTCACCACCCACTTGGCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS GCA 72 bp | ACACCATGTTATGCTGGACAACTAGCCTGTCGTTTCTaGACCATGGGCTGTGCTATTCTCACGGCCAAGATA | + |
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Preference number: 6 (lower is better) Translates to: TPCYAGQLACRF*TMGCAILTAKI Trigger: TATCTTGGCCGTGAGAATAGCACAGCCCATGGTGCAGAAACGACAGGCTAGTTGTCCAGCATAACATGGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS CCA 72 bp | TCTTTCCTACTACAGATGAGCTTGCTCATCTTGCTGTaGAGAGGAAGTGGAGCATGGTCCAGACAAGCACTG | + |
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Preference number: 6 (lower is better) Translates to: SFLLQMSLLILL*RGSGAWSRQAL Trigger: CAGTGCTTGTCTGGACCATGCTCCACTTCCTCTCCACAGCAAGATGAGCAAGCTCATCTGTAGTAGGAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS CAA 90 bp | TGTGCAGGGGATGCATTCCTACATTCTTTCCTACTACAGATGAGCTaGCTCATCTTGCTGTGGAGAGGAAGTGGAGCATGGTCCAGACAA | + |
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Preference number: 6 (lower is better) Translates to: CAGDAFLHSFLLQMS*LILLWRGSGAWSRQ Trigger: TTGTCTGGACCATGCTCCACTTCCTCTCCACAGCAAGATGAGCAAGCTCATCTGTAGTAGGAAAGAATGTAGGAATGCATCCCCTGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000665516.1 ENST00000670426.1 |
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| CDS GCA 72 bp | TCCCAGCAGTCTTACATGAGCCTTGAACCACTTCTCTaGTTCTCAATTGTGAGGCCAAAATGCTTCCCACGT | + |
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Preference number: 6 (lower is better) Translates to: SQQSYMSLEPLL*FSIVRPKCFPR Trigger: ACGTGGGAAGCATTTTGGCCTCACAATTGAGAAGCAGAGAAGTGGTTCAAGGCTCATGTAAGACTGCTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000412856.6 ENST00000670426.1 |
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| CDS CCA 72 bp | TGTGGAGAGGAAGTGGAGCATGGTCCAGACAAGCACTaGTTTTGTCATCGCTGTCTAGTAACATCAGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: CGEEVEHGPDKH*FCHRCLVTSEK Trigger: CTTCTCTGATGTTACTAGACAGCGATGACAAAACCAGTGCTTGTCTGGACCATGCTCCACTTCCTCTCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS CAA 72 bp | TCTTGTGTAATAGTTGTCTCTCAGTATCAGAGGGGATaGGTTCCAGGACCTCCTGCCTCGAAGTGTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SCVIVVSQYQRG*VPGPPASKCLF Trigger: GAAGAGACACTTCGAGGCAGGAGGTCCTGGAACCAATCCCCTCTGATACTGAGAGACAACTATTACACAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000412856.6 ENST00000424194.1 ENST00000437235.7 ENST00000658573.1 |
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| CDS CAA 72 bp | TCTTGTGTAATAGTTGTCTCTCAGTATCAGAGGGGATaGGTTCCAGGACCTCAAAGCCGTCGGGTCAGTAAC | + |
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Preference number: 6 (lower is better) Translates to: SCVIVVSQYQRG*VPGPQSRRVSN Trigger: GTTACTGACCCGACGGCTTTGAGGTCCTGGAACCAATCCCCTCTGATACTGAGAGACAACTATTACACAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665516.1 ENST00000670426.1 |
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| CDS CAA 90 bp | GATGCATTCCTACATTCTTTCCTACTACAGATGAGCTTGCTCATCTaGCTGTGGAGAGGAAGTGGAGCATGGTCCAGACAAGCACTGGTT | + |
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Preference number: 6 (lower is better) Translates to: DAFLHSFLLQMSLLI*LWRGSGAWSRQALV Trigger: AACCAGTGCTTGTCTGGACCATGCTCCACTTCCTCTCCACAGCAAGATGAGCAAGCTCATCTGTAGTAGGAAAGAATGTAGGAATGCATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS CAA 90 bp | GAATATTTCTCTTGTGTAATAGTTGTCTCTCAGTATCAGAGGGGATaGGTTCCAGGACCTCAAAGCCGTCGGGTCAGTAACCAGAAGCCG | + |
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Preference number: 6 (lower is better) Translates to: EYFSCVIVVSQYQRG*VPGPQSRRVSNQKP Trigger: CGGCTTCTGGTTACTGACCCGACGGCTTTGAGGTCCTGGAACCAATCCCCTCTGATACTGAGAGACAACTATTACACAAGAGAAATATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000665516.1 ENST00000670426.1 |
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| CDS CAA 90 bp | TTGCTGTGGAGAGGAAGTGGAGCATGGTCCAGACAAGCACTGGTTTaGTCATCGCTGTCTAGTAACATCAGAGAAGAAAGCTTCCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: LLWRGSGAWSRQALV*SSLSSNIREESFLF Trigger: GAAAAGGAAGCTTTCTTCTCTGATGTTACTAGACAGCGATGACAAAACCAGTGCTTGTCTGGACCATGCTCCACTTCCTCTCCACAGCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS TCA 72 bp | CTCAGCTTTATCTGCCTCAGAGTAAATGGAGCCAGCTaGAATAGGTCTGTAACCCTGCATGGAGATTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: LSFICLRVNGAS*NRSVTLHGDLE Trigger: CTCCAAATCTCCATGCAGGGTTACAGACCTATTTCAGCTGGCTCCATTTACTCTGAGGCAGATAAAGCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS GCA 72 bp | CTCTCTCTCTCTCATTCTCTCCTCCGCTTTTCTCTGTaGAGGGGATGCATTCCTACATTCTTTCCTACTACA | + |
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Preference number: 6 (lower is better) Translates to: LSLSHSLLRFSL*RGCIPTFFPTT Trigger: TGTAGTAGGAAAGAATGTAGGAATGCATCCCCTGCACAGAGAAAAGCGGAGGAGAGAATGAGAGAGAGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000665516.1 ENST00000670426.1 |
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| CDS CAA 72 bp | AGAGGAAGTGGAGCATGGTCCAGACAAGCACTGGTTTaGTCATCGCTGTCTAGTAACATCAGAGAAGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: RGSGAWSRQALV*SSLSSNIREES Trigger: GCTTTCTTCTCTGATGTTACTAGACAGCGATGACAAAACCAGTGCTTGTCTGGACCATGCTCCACTTCCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS CAA 72 bp | GATGCATTCCTACATTCTTTCCTACTACAGATGAGCTaGCTCATCTTGCTGTGGAGAGGAAGTGGAGCATGG | + |
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Preference number: 6 (lower is better) Translates to: DAFLHSFLLQMS*LILLWRGSGAW Trigger: CCATGCTCCACTTCCTCTCCACAGCAAGATGAGCAAGCTCATCTGTAGTAGGAAAGAATGTAGGAATGCATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS GCA 72 bp | ACTGAGGGCTATTTGCTGCAAATACCTACAACATTCTaGTTAGGGTTATTTTTCCGGCACAGGGAGACCGTT | + |
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Preference number: 6 (lower is better) Translates to: TEGYLLQIPTTF*LGLFFRHRETV Trigger: AACGGTCTCCCTGTGCCGGAAAAATAACCCTAAGCAGAATGTTGTAGGTATTTGCAGCAAATAGCCCTCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS CCA 72 bp | TCATCGAATGCAGGAACCACAACAAATGGGACTCACTaGTTCTTTGTACCACATATGGGAACACAGCCACAA | + |
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Preference number: 6 (lower is better) Translates to: SSNAGTTTNGTH*FFVPHMGTQPQ Trigger: TTGTGGCTGTGTTCCCATATGTGGTACAAAGAACCAGTGAGTCCCATTTGTTGTGGTTCCTGCATTCGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000412856.6 ENST00000424194.1 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS CAA 90 bp | GAATATTTCTCTTGTGTAATAGTTGTCTCTCAGTATCAGAGGGGATaGGTTCCAGGACCTCCTGCCTCGAAGTGTCTCTTCACTTTCACT | + |
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Preference number: 6 (lower is better) Translates to: EYFSCVIVVSQYQRG*VPGPPASKCLFTFT Trigger: AGTGAAAGTGAAGAGACACTTCGAGGCAGGAGGTCCTGGAACCAATCCCCTCTGATACTGAGAGACAACTATTACACAAGAGAAATATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000412856.6 ENST00000424194.1 ENST00000437235.7 ENST00000658573.1 |
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| CDS CAA 72 bp | GTACTACACCAATCCTCAGGACACACTGAGGGCTATTaGCTGCAAATACCTACAACATTCTGCTTAGGGTTA | + |
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Preference number: 6 (lower is better) Translates to: VLHQSSGHTEGY*LQIPTTFCLGL Trigger: TAACCCTAAGCAGAATGTTGTAGGTATTTGCAGCAAATAGCCCTCAGTGTGTCCTGAGGATTGGTGTAGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS CCA 72 bp | AGAAGCTGCATAAATAGGCTGTCATCAAAGCTCTCTTaGAGAGTGCATCATCTCCTCATGACTTCAGGTATT | + |
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Preference number: 6 (lower is better) Translates to: RSCINRLSSKLS*RVHHLLMTSGI Trigger: AATACCTGAAGTCATGAGGAGATGATGCACTCTCCAAGAGAGCTTTGATGACAGCCTATTTATGCAGCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS CAA 90 bp | CTCTCTTCATCCCTCTCCCTGCTAAGGTTACGATTTATTGAATATTaGGCACAAGTAATGGGTAGTTGTAGTCTAGGGGAAGTAGACCTT | + |
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Preference number: 6 (lower is better) Translates to: LSSSLSLLRLRFIEY*AQVMGSCSLGEVDL Trigger: AAGGTCTACTTCCCCTAGACTACAACTACCCATTACTTGTGCCAAATATTCAATAAATCGTAACCTTAGCAGGGAGAGGGATGAAGAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000665516.1 ENST00000670426.1 |
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| CDS CAA 72 bp | TCCCTCTCCCTGCTAAGGTTACGATTTATTGAATATTaGGCACAAGTAATGGGTAGTTGTAGTCTAGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: SLSLLRLRFIEY*AQVMGSCSLGE Trigger: TTCCCCTAGACTACAACTACCCATTACTTGTGCCAAATATTCAATAAATCGTAACCTTAGCAGGGAGAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000665516.1 ENST00000670426.1 |
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| CDS CAA 90 bp | TATATTTATGTACTACACCAATCCTCAGGACACACTGAGGGCTATTaGCTGCAAATACCTACAACATTCTGCTTAGGGTTATTTTTCCGG | + |
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Preference number: 6 (lower is better) Translates to: YIYVLHQSSGHTEGY*LQIPTTFCLGLFFR Trigger: CCGGAAAAATAACCCTAAGCAGAATGTTGTAGGTATTTGCAGCAAATAGCCCTCAGTGTGTCCTGAGGATTGGTGTAGTACATAAATATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS TCA 72 bp | CTGAGGTTTGTACATAATGATTGGTTGAACTGCTTCTaGTGTTGCAATCTCAGCTTTATCTGCCTCAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: LRFVHNDWLNCF*CCNLSFICLRV Trigger: TACTCTGAGGCAGATAAAGCTGAGATTGCAACATCAGAAGCAGTTCAACCAATCATTATGTACAAACCTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS TCA 72 bp | GTATATTTATGTACTACACCAATCCTCAGGACACACTaGGGGCTATTTGCTGCAAATACCTACAACATTCTG | + |
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Preference number: 6 (lower is better) Translates to: VYLCTTPILRTH*GLFAANTYNIL Trigger: CAGAATGTTGTAGGTATTTGCAGCAAATAGCCCTCAGTGTGTCCTGAGGATTGGTGTAGTACATAAATATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS TCA 72 bp | CATCAAAGCTCTCTTGGAGAGTGCATCATCTCCTCATaGCTTCAGGTATTTAATCTCCATATGACTCTCATA | + |
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Preference number: 6 (lower is better) Translates to: HQSSLGECIISS*LQVFNLHMTLI Trigger: TATGAGAGTCATATGGAGATTAAATACCTGAAGTCATGAGGAGATGATGCACTCTCCAAGAGAGCTTTGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000412856.6 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS CAA 90 bp | TTCACAACACTTAAACGAGATTTTGTGAATGGTAGAATATTTCTCTaGTGTAATAGTTGTCTCTCAGTATCAGAGGGGATTGGTTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: FTTLKRDFVNGRIFL*CNSCLSVSEGIGSR Trigger: CCTGGAACCAATCCCCTCTGATACTGAGAGACAACTATTACACAAGAGAAATATTCTACCATTCACAAAATCTCGTTTAAGTGTTGTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000412856.6 ENST00000424194.1 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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| CDS TCA 72 bp | AGCAACTACTTAGCATTTTCTTGGATTAACATGTCGTaGTTTCTCCATTCCTTGGTTGAAGGGCATTTATGT | + |
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Preference number: 6 (lower is better) Translates to: SNYLAFSWINMS*FLHSLVEGHLC Trigger: ACATAAATGCCCTTCAACCAAGGAATGGAGAAATCACGACATGTTAATCCAAGAAAATGCTAAGTAGTTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000424194.1 ENST00000658573.1 ENST00000670426.1 |
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| CDS CAA 72 bp | CTTAAACGAGATTTTGTGAATGGTAGAATATTTCTCTaGTGTAATAGTTGTCTCTCAGTATCAGAGGGGATT | + |
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Preference number: 6 (lower is better) Translates to: LKRDFVNGRIFL*CNSCLSVSEGI Trigger: AATCCCCTCTGATACTGAGAGACAACTATTACACAAGAGAAATATTCTACCATTCACAAAATCTCGTTTAAG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000412856.6 ENST00000424194.1 ENST00000437235.7 ENST00000658573.1 ENST00000665516.1 ENST00000670426.1 |
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