RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEPTIN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000180096

Ensembl transcript IDs: ENST00000321367.7, ENST00000563743.1, ENST00000563957.6, ENST00000566517.5, ENST00000567783.1, ENST00000568577.5, ENST00000570039.1, ENST00000572252.6, ENST00000573615.5, ENST00000652617.1

Found 264 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAGAGGCCGACTGAAGGCGGAGCCGAGGTAAGGCCGGGCGGGGCGTaGCCTCAGAGGGCGTCTGACTGCTCGCCCTGGGCCTGGCTCTGC +
Preference number: 1 (lower is better)
Translates to: KRPTEGGAEVRPGGA*PQRASDCSPWAWLC
Trigger: GCAGAGCCAGGCCCAGGGCGAGCAGTCAGACGCCCTCTGAGGCCACGCCCCGCCCGGCCTTACCTCGGCTCCGCCTTCAGTCGGCCTCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572252.6
3UTR CCA 90 bp GCTTCTCGGTGTCCGCCAGAGGCAGCATGGGCAGCGGGATCTCTGTaGCGCTCTGGCGGGAAAGCTTACTGCGGCTGGCTCGATCGCGAG +
Preference number: 1 (lower is better)
Translates to: ASRCPPEAAWAAGSL*RSGGKAYCGWLDRE
Trigger: CTCGCGATCGAGCCAGCCGCAGTAAGCTTTCCCGCCAGAGCGCCACAGAGATCCCGCTGCCCATGCTGCCTCTGGCGGACACCGAGAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572252.6
3UTR TCA 90 bp ATTGAAGACAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTaGTGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGTGGGCG +
Preference number: 1 (lower is better)
Translates to: IEDRVWEKKGDSGRQ*CGRRLCRPRAGKWA
Trigger: CGCCCACTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTCTGTCTTCAAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
3UTR TCA 90 bp GCGTCCCCTCACCGGCCGGTTCCCGCCATCCCTCACCACCTCGCATaGTCCCACGACTGCAAAAGGGATGCTTTCCTTCATCTCTGCATC +
Preference number: 1 (lower is better)
Translates to: ASPHRPVPAIPHHLA*SHDCKRDAFLHLCI
Trigger: GATGCAGAGATGAAGGAAAGCATCCCTTTTGCAGTCGTGGGATCATGCGAGGTGGTGAGGGATGGCGGGAACCGGCCGGTGAGGGGACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572252.6
3UTR CCA 90 bp GGCCTGGGTTTCCTGGGGCATCAGAGCATCCGCTTTGCCAATGACTaGGATGATGTTGACTTTCTCGTGTACTGCCCGGAGGAAGGCCAC +
Preference number: 1 (lower is better)
Translates to: GLGFLGHQSIRFAND*DDVDFLVYCPEEGH
Trigger: GTGGCCTTCCTCCGGGCAGTACACGAGAAAGTCAACATCATCCCAGTCATTGGCAAAGCGGATGCTCTGATGCCCCAGGAAACCCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572252.6
3UTR-3UTR GCA 90 bp TACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCGCTGCGGTCGGAGATTGTaGAGGCCCCGGGCCGGGAAG +
Preference number: 2 (lower is better)
Translates to: YGLRLGEPPPSPREGGTRCGRRL*RPRAGK
Trigger: CTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCA...GCGGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
3UTR-3UTR CCA 90 bp GGCGGGACCAGCGCCGGGGCGGGGCTACGGACTCAGGCTGGGAGAACCTCCCCCGTGGGGCGCGGGGATTaGACAAGAGGCCGACTGAAG +
Preference number: 2 (lower is better)
Translates to: GGTSAGAGLRTQAGRTSPVGRGD*TRGRLK
Trigger: CTTCAGTCGGCCTCTTGTCCAATCCCCGCGCCCCAC...GGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCCCCGCCCCGGCGCTGGTCCCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
3UTR-3UTR CCA 90 bp TACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCGCGGGCGCTGGGCAGTGTaGGGCGCGGGGATTGGACAA +
Preference number: 2 (lower is better)
Translates to: YGLRLGEPPPSPREGGTRGRWAV*GAGIGQ
Trigger: TTGTCCAATCCCCGCGCCCCACACTGCCCAGCGCCC...GCGGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
3UTR-3UTR TCA 90 bp CGGGGCTACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCGGACAAGAGGCCGACTaGAGGCGGAGCCGAGGTAAG +
Preference number: 2 (lower is better)
Translates to: RGYGLRLGEPPPSPREGGGQEAD*RRSRGK
Trigger: CTTACCTCGGCTCCGCCTTCAGTCGGCCTCTTGTCC...GCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
3UTR-3UTR CCA 90 bp GAAGGCGGAGCCGAGGTAAGGCCGGGCGGGGCGTGGCCTCAGAGGGCGTCTGACAGGGCCTGGGTTTCCTaGGGCATCAGAGCATCCGCT +
Preference number: 2 (lower is better)
Translates to: EGGAEVRPGGAWPQRASDRAWVS*GIRASA
Trigger: AGCGGATGCTCTGATGCCCCAGGAAACCCAGGCCCT...GTCAGACGCCCTCTGAGGCCACGCCCCGCCCGGCCTTACCTCGGCTCCGCCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572252.6
3UTR-3UTR CCA 90 bp GGGCAGTGTGGGGCGCGGGGATTGGACAAGAGGCCGACTGAAGGCGGAGCCGAGGCTACGGACTCAGGCTaGGAGAACCTCCCCCTAGCC +
Preference number: 2 (lower is better)
Translates to: GQCGARGLDKRPTEGGAEATDSG*ENLPLA
Trigger: GGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGC...CTCGGCTCCGCCTTCAGTCGGCCTCTTGTCCAATCCCCGCGCCCCACACTGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
3UTR-3UTR TCA 90 bp CCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGTGGGGGACAAGAGGCCGACTaGAGGCGGAGCCGAGGTAAG +
Preference number: 2 (lower is better)
Translates to: PEDSDAVGDCAGPGPGSGGQEAD*RRSRGK
Trigger: CTTACCTCGGCTCCGCCTTCAGTCGGCCTCTTGTCC...CCCACTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
3UTR-3UTR CCA 90 bp ACTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGTGGGCGCTGGGCAGTGTaGGGCGCGGGGATTGGACAA +
Preference number: 2 (lower is better)
Translates to: TPEDSDAVGDCAGPGPGSGRWAV*GAGIGQ
Trigger: TTGTCCAATCCCCGCGCCCCACACTGCCCAGCGCCC...ACTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
3UTR-3UTR CCA 90 bp CCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGTGGGGCTACGGACTCAGGCTaGGAGAACCTCCCCCTAGCC +
Preference number: 2 (lower is better)
Translates to: PEDSDAVGDCAGPGPGSGATDSG*ENLPLA
Trigger: GGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGC...CCCACTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
3UTR-3UTR TCA 90 bp GAAGGCGGAGCCGAGGTAAGGCCGGGCGGGGCGTGGCCTCAGAGGGCGTCTGACTTCAGGAAATCGCAGTaGTGTGGGTTCTCCACCTCC +
Preference number: 2 (lower is better)
Translates to: EGGAEVRPGGAWPQRASDFRKSQ*CGFSTS
Trigger: GGAGGTGGAGAACCCACATCACTGCGATTTCCTGAA...GTCAGACGCCCTCTGAGGCCACGCCCCGCCCGGCCTTACCTCGGCTCCGCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572252.6
3UTR-3UTR CCA 90 bp CGCAGCTCTTCGTCTTTCTCGCGGATCAGCTTCTCGGTGTCCGCCAGAGGCAGCGGGCGCTGGGCAGTGTaGGGCGCGGGGATTGGACAA +
Preference number: 2 (lower is better)
Translates to: RSSSSFSRISFSVSARGSGRWAV*GAGIGQ
Trigger: TTGTCCAATCCCCGCGCCCCACACTGCCCAGCGCCC...GCTGCCTCTGGCGGACACCGAGAAGCTGATCCGCGAGAAAGACGAAGAGCTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572252.6
3UTR-3UTR CCA 90 bp CGGTGTCCGCCAGAGGCAGCATGGGCAGCGGGATCTCTGTGGCGCTCTGGCGGGTGGACTCGGGAGTCCTaGATGTTCTTCCGGTTCAGG +
Preference number: 2 (lower is better)
Translates to: RCPPEAAWAAGSLWRSGGWTRES*MFFRFR
Trigger: CCTGAACCGGAAGAACATCCAGGACTCCCGAGTCCA...CCCGCCAGAGCGCCACAGAGATCCCGCTGCCCATGCTGCCTCTGGCGGACACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572252.6
3UTR-3UTR CCA 90 bp GGACTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGCAGCGGGATCTCTGTaGCGCTCTGGCGGGAAAGCT +
Preference number: 2 (lower is better)
Translates to: GLRKTVMRSEIVQAPGREAAGSL*RSGGKA
Trigger: AGCTTTCCCGCCAGAGCGCCACAGAGATCCCGCTGC...TTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572252.6
3UTR-3UTR CCA 90 bp AGACAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGGAAGTGGGCGGTGTCTaGGTGGGCGGGACCAGCGCC +
Preference number: 2 (lower is better)
Translates to: RQSLGEEGGLRKTVMRSEEVGGV*VGGTSA
Trigger: GGCGCTGGTCCCGCCCACCCAGACACCGCCCACTTC...CTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTCTGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
3UTR-3UTR CCA 90 bp CAGGTCCTGCAGGTGTGTCTGCACCAGCATCCGTCGCAGGTTCAGGAAATCGCAGAAGTGGGCGGTGTCTaGGTGGGCGGGACCAGCGCC +
Preference number: 2 (lower is better)
Translates to: QVLQVCLHQHPSQVQEIAEVGGV*VGGTSA
Trigger: GGCGCTGGTCCCGCCCACCCAGACACCGCCCACTTC...TGCGATTTCCTGAACCTGCGACGGATGCTGGTGCAGACACACCTGCAGGACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572252.6
3UTR-3UTR TCA 90 bp GAGGCAGCATGGGCAGCGGGATCTCTGTGGCGCTCTGGCGGGAAAGCTTACTGCCCTCACCACCTCGCATaGTCCCACGACTGCAAAAGG +
Preference number: 2 (lower is better)
Translates to: EAAWAAGSLWRSGGKAYCPHHLA*SHDCKR
Trigger: CCTTTTGCAGTCGTGGGATCATGCGAGGTGGTGAGG...GCAGTAAGCTTTCCCGCCAGAGCGCCACAGAGATCCCGCTGCCCATGCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572252.6
3UTR-3UTR TCA 90 bp TCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCGCGGAGGTCAAGCTCAGTTTTTATTaGAGACAGAGTCTGGGAGAA +
Preference number: 2 (lower is better)
Translates to: SGWENLPLARARAAPAEVKLSFY*RQSLGE
Trigger: TTCTCCCAGACTCTGTCTTCAATAAAAACTGAGCTT...GACCTCCGCGGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
3UTR-3UTR TCA 90 bp CTTTCAGGTCCTGCAGGTGTGTCTGCACCAGCATCCGTCGCAGGTTCAGGAAATCCCGGATCTTCTGCTTaGGGGCCTGGGTTTCCTGGG +
Preference number: 2 (lower is better)
Translates to: LSGPAGVSAPASVAGSGNPGSSA*GPGFPG
Trigger: CCCAGGAAACCCAGGCCCTCAAGCAGAAGATCCGGG...ATTTCCTGAACCTGCGACGGATGCTGGTGCAGACACACCTGCAGGACCTGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572252.6
3UTR CAA 90 bp TCCTGGGGCATCAGAGCATCCGCTTTGCCAATGACTGGGATGATGTaGACTTTCTCGTGTACTGCCCGGAGGAAGGCCACATCTAGGGGC +
Preference number: 2 (lower is better)
Translates to: SWGIRASALPMTGMM*TFSCTARRKATSRG
Trigger: GCCCCTAGATGTGGCCTTCCTCCGGGCAGTACACGAGAAAGTCAACATCATCCCAGTCATTGGCAAAGCGGATGCTCTGATGCCCCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572252.6
3UTR CAA 90 bp TTCTGCTTGAGGGCCTGGGTTTCCTGGGGCATCAGAGCATCCGCTTaGCCAATGACTGGGATGATGTTGACTTTCTCGTGTACTGCCCGG +
Preference number: 2 (lower is better)
Translates to: FCLRAWVSWGIRASA*PMTGMMLTFSCTAR
Trigger: CCGGGCAGTACACGAGAAAGTCAACATCATCCCAGTCATTGGCAAAGCGGATGCTCTGATGCCCCAGGAAACCCAGGCCCTCAAGCAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572252.6
3UTR-3UTR CCA 90 bp GAAGCTCAGTTTTTATTGAAGACAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGTGGGGCGCGGGGATTaGACAAGAGGCCGACTGAAG +
Preference number: 2 (lower is better)
Translates to: EAQFLLKTESGRRRGTPEVGRGD*TRGRLK
Trigger: CTTCAGTCGGCCTCTTGTCCAATCCCCGCGCCCCAC...TTCCGGAGTCCCCCTTCTTCTCCCAGACTCTGTCTTCAATAAAAACTGAGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
3UTR CCA 72 bp ACTGAAGGCGGAGCCGAGGTAAGGCCGGGCGGGGCGTaGCCTCAGAGGGCGTCTGACTGCTCGCCCTGGGCC +
Preference number: 3 (lower is better)
Translates to: TEGGAEVRPGGA*PQRASDCSPWA
Trigger: GGCCCAGGGCGAGCAGTCAGACGCCCTCTGAGGCCACGCCCCGCCCGGCCTTACCTCGGCTCCGCCTTCAGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572252.6
3UTR-3UTR CAA 90 bp GGGCGGGGCTACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCTGTGGGGCGCGGGGATaGGACAAGAGGCCGACTGAA +
Preference number: 3 (lower is better)
Translates to: GRGYGLRLGEPPPSPREGCGARG*DKRPTE
Trigger: TTCAGTCGGCCTCTTGTCCAATCCCCGCGCCCCACA...GCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCCCCGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
3UTR CCA 72 bp TGTCCGCCAGAGGCAGCATGGGCAGCGGGATCTCTGTaGCGCTCTGGCGGGAAAGCTTACTGCGGCTGGCTC +
Preference number: 3 (lower is better)
Translates to: CPPEAAWAAGSL*RSGGKAYCGWL
Trigger: GAGCCAGCCGCAGTAAGCTTTCCCGCCAGAGCGCCACAGAGATCCCGCTGCCCATGCTGCCTCTGGCGGACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572252.6
3UTR TCA 72 bp AGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTaGTGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGG +
Preference number: 3 (lower is better)
Translates to: RVWEKKGDSGRQ*CGRRLCRPRAG
Trigger: CCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
3UTR CCA 72 bp AGAGGCAGCATGGGCAGCGGGATCTCTGTGGCGCTCTaGCGGGAAAGCTTACTGCGGCTGGCTCGATCGCGA +
Preference number: 3 (lower is better)
Translates to: RGSMGSGISVAL*RESLLRLARSR
Trigger: TCGCGATCGAGCCAGCCGCAGTAAGCTTTCCCGCCAGAGCGCCACAGAGATCCCGCTGCCCATGCTGCCTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572252.6
3UTR-3UTR CAA 90 bp ACTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGTTGTGGGGCGCGGGGATaGGACAAGAGGCCGACTGAA +
Preference number: 3 (lower is better)
Translates to: TPEDSDAVGDCAGPGPGSCGARG*DKRPTE
Trigger: TTCAGTCGGCCTCTTGTCCAATCCCCGCGCCCCACA...ACTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
3UTR-3UTR CAA 90 bp GCGCAGCTCTTCGTCTTTCTCGCGGATCAGCTTCTCGGTGTCCGCCAGAGGCAGTGTGGGGCGCGGGGATaGGACAAGAGGCCGACTGAA +
Preference number: 3 (lower is better)
Translates to: AQLFVFLADQLLGVRQRQCGARG*DKRPTE
Trigger: TTCAGTCGGCCTCTTGTCCAATCCCCGCGCCCCACA...CTGCCTCTGGCGGACACCGAGAAGCTGATCCGCGAGAAAGACGAAGAGCTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572252.6
3UTR-3UTR CAA 90 bp CGGTGTCCGCCAGAGGCAGCATGGGCAGCGGGATCTCTGTGGCGCTCTGGCGGGATCAGAGCATCCGCTTaGCCAATGACTGGGATGATG +
Preference number: 3 (lower is better)
Translates to: RCPPEAAWAAGSLWRSGGIRASA*PMTGMM
Trigger: CATCATCCCAGTCATTGGCAAAGCGGATGCTCTGAT...CCCGCCAGAGCGCCACAGAGATCCCGCTGCCCATGCTGCCTCTGGCGGACACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572252.6
3UTR TCA 72 bp TGCACCAGCATCCGTCGCAGGTTCAGGAAATCGCAGTaGTGTGGGTTCTCCACCTCCACGGTCCCCCAGGAG +
Preference number: 3 (lower is better)
Translates to: CTSIRRRFRKSQ*CGFSTSTVPQE
Trigger: CTCCTGGGGGACCGTGGAGGTGGAGAACCCACATCACTGCGATTTCCTGAACCTGCGACGGATGCTGGTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572252.6
3UTR TCA 72 bp CACCGGCCGGTTCCCGCCATCCCTCACCACCTCGCATaGTCCCACGACTGCAAAAGGGATGCTTTCCTTCAT +
Preference number: 3 (lower is better)
Translates to: HRPVPAIPHHLA*SHDCKRDAFLH
Trigger: ATGAAGGAAAGCATCCCTTTTGCAGTCGTGGGATCATGCGAGGTGGTGAGGGATGGCGGGAACCGGCCGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572252.6
3UTR CCA 72 bp TTCCTGGGGCATCAGAGCATCCGCTTTGCCAATGACTaGGATGATGTTGACTTTCTCGTGTACTGCCCGGAG +
Preference number: 3 (lower is better)
Translates to: FLGHQSIRFAND*DDVDFLVYCPE
Trigger: CTCCGGGCAGTACACGAGAAAGTCAACATCATCCCAGTCATTGGCAAAGCGGATGCTCTGATGCCCCAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572252.6
3UTR GCA 72 bp TCCCACGACTGCAAAAGGGATGCTTTCCTTCATCTCTaGATCCTGCCTCTTGAAGTCTTCATCTTCATCAGA +
Preference number: 3 (lower is better)
Translates to: SHDCKRDAFLHL*ILPLEVFIFIR
Trigger: TCTGATGAAGATGAAGACTTCAAGAGGCAGGATGCAGAGATGAAGGAAAGCATCCCTTTTGCAGTCGTGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR CCA 90 bp GGCGGGACCAGCGCCGGGGCGGGGCTACGGACTCAGGCTGGGAGAACCTCCCCCGAAGTGGGCGGTGTCTaGGTGGGCGGGACCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GGTSAGAGLRTQAGRTSPEVGGV*VGGTSA
Trigger: GGCGCTGGTCCCGCCCACCCAGACACCGCCCACTTC...GGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCCCCGCCCCGGCGCTGGTCCCGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp AGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCGCGGAGGTCCCCAGAGGGCGTCTGACTaGTCGCCCTGGGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RLGEPPPSPREGGTRGGPQRASD*SPWAWL
Trigger: GAGCCAGGCCCAGGGCGAGCAGTCAGACGCCCTCTG...GGGACCTCCGCGGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR TCA 90 bp AGGCCGACTGAAGGCGGAGCCGAGGTAAGGCCGGGCGGGGCGTGGCCTCAGAGGGCCTCAGAGGGCGTCTaGCTGCTCGCCCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RPTEGGAEVRPGGAWPQRASEGV*LLALGL
Trigger: CAGGCCCAGGGCGAGCAGTCAGACGCCCTCTGAGGC...CCTCTGAGGCCACGCCCCGCCCGGCCTTACCTCGGCTCCGCCTTCAGTCGGCCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR GCA 90 bp CGGGGCTACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCTGCGGTCGGAGATTGTaGAGGCCCCGGGCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: RGYGLRLGEPPPSPREGGCGRRL*RPRAGK
Trigger: CTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCA...GCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCCCCG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp GGCGGGACCAGCGCCGGGGCGGGGCTACGGACTCAGGCTGGGAGAACCTCCCCCCCCTGGGCCTGGCTCTaGTGCATTTGGGCCTGCATC +
Preference number: 4 (lower is better)
Translates to: GGTSAGAGLRTQAGRTSPPWAWL*CIWACI
Trigger: GATGCAGGCCCAAATGCAGCAGAGCCAGGCCCAGGG...GGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCCCCGCCCCGGCGCTGGTCCCGCC
72% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp GGCGGGACCAGCGCCGGGGCGGGGCTACGGACTCAGGCTGGGAGAACCTCCCCCGCTACGGACTCAGGCTaGGAGAACCTCCCCCTAGCC +
Preference number: 4 (lower is better)
Translates to: GGTSAGAGLRTQAGRTSPATDSG*ENLPLA
Trigger: GGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGC...GGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCCCCGCCCCGGCGCTGGTCCCGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR TCA 90 bp TACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCGCGGTGGGGCAGGAAGCTaGGTGCGGCTTCAACCCTCC +
Preference number: 4 (lower is better)
Translates to: YGLRLGEPPPSPREGGTRGGAGS*VRLQPS
Trigger: GGAGGGTTGAAGCCGCACTCAGCTTCCTGCCCCACC...GCGGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR TCA 90 bp CGGGGATTGGACAAGAGGCCGACTGAAGGCGGAGCCGAGGTAAGGCCGGGCGGGGCCTCAGAGGGCGTCTaGCTGCTCGCCCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: RGLDKRPTEGGAEVRPGGASEGV*LLALGL
Trigger: CAGGCCCAGGGCGAGCAGTCAGACGCCCTCTGAGGC...CCCGCCCGGCCTTACCTCGGCTCCGCCTTCAGTCGGCCTCTTGTCCAATCCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR TCA 90 bp GGGGCGCGGGGATTGGACAAGAGGCCGACTGAAGGCGGAGCCGAGGTAAGGCCGGCCTCAGAGGGCGTCTaGCTGCTCGCCCTGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GARGLDKRPTEGGAEVRPASEGV*LLALGL
Trigger: CAGGCCCAGGGCGAGCAGTCAGACGCCCTCTGAGGC...CGGCCTTACCTCGGCTCCGCCTTCAGTCGGCCTCTTGTCCAATCCCCGCGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp AGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCGCGGAGGTCCCGCGAGCACTGGCCTCTaGCACCTGGCGATCCTCATA +
Preference number: 4 (lower is better)
Translates to: RLGEPPPSPREGGTRGGPASTGL*HLAILI
Trigger: TATGAGGATCGCCAGGTGCCAGAGGCCAGTGCTCGC...GGGACCTCCGCGGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR CCA 90 bp AGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCGCGGAGGTCCCGTGTCAAGCGAGCACTaGCCTCTGGCACCTGGCGAT +
Preference number: 4 (lower is better)
Translates to: RLGEPPPSPREGGTRGGPVSSEH*PLAPGD
Trigger: ATCGCCAGGTGCCAGAGGCCAGTGCTCGCTTGACAC...GGGACCTCCGCGGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR CCA 90 bp GCTACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCCGCCCCGGCGCTCAATaGCCAGGGTCTGTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: ATDSGWENLPLARARAAPRPGAQ*PGSVSS
Trigger: GCTTGACACAGACCCTGGCCATTGAGCGCCGGGGCG...GGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR CCA 90 bp CGGGGCTACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCGCAGCGGGATCTCTGTaGCGCTCTGGCGGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: RGYGLRLGEPPPSPREGGAAGSL*RSGGKA
Trigger: AGCTTTCCCGCCAGAGCGCCACAGAGATCCCGCTGC...GCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCCCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp TACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCGCTGCTCGCCCTGGGCCTaGCTCTGCTGCATTTGGGCC +
Preference number: 4 (lower is better)
Translates to: YGLRLGEPPPSPREGGTRCSPWA*LCCIWA
Trigger: GGCCCAAATGCAGCAGAGCCAGGCCCAGGGCGAGCA...GCGGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp GGCGGGACCAGCGCCGGGGCGGGGCTACGGACTCAGGCTGGGAGAACCTCCCCCTCTGACTGCTCGCCCTaGGCCTGGCTCTGCTGCATT +
Preference number: 4 (lower is better)
Translates to: GGTSAGAGLRTQAGRTSPSDCSP*AWLCCI
Trigger: AATGCAGCAGAGCCAGGCCCAGGGCGAGCAGTCAGA...GGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCCCCGCCCCGGCGCTGGTCCCGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp AGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCGCGGAGGTCCCAGCCATCACTGCACCTaGCGTCTCTCCCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: RLGEPPPSPREGGTRGGPSHHCT*RLSPLP
Trigger: AGGAAGTGGGGAGAGACGGCAGGTGCAGTGATGGCT...GGGACCTCCGCGGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR GCA 90 bp GGGCGGGGCTACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCTCCTGCAGGTGTGTCTaGACCAGCATCCGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: GRGYGLRLGEPPPSPREGSCRCV*TSIRRR
Trigger: CCTGCGACGGATGCTGGTGCAGACACACCTGCAGGA...GCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCCCCGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp CGGGGATTGGACAAGAGGCCGACTGAAGGCGGAGCCGAGGTAAGGCCGGGCGGGCAGAGGGCGTCTGACTaGTCGCCCTGGGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: RGLDKRPTEGGAEVRPGGQRASD*SPWAWL
Trigger: GAGCCAGGCCCAGGGCGAGCAGTCAGACGCCCTCTG...CCCGCCCGGCCTTACCTCGGCTCCGCCTTCAGTCGGCCTCTTGTCCAATCCCCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp CGGGGCTACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCAGGGCCTGGGTTTCCTaGGGCATCAGAGCATCCGCT +
Preference number: 4 (lower is better)
Translates to: RGYGLRLGEPPPSPREGGRAWVS*GIRASA
Trigger: AGCGGATGCTCTGATGCCCCAGGAAACCCAGGCCCT...GCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp TACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCGCGCTACGGACTCAGGCTaGGAGAACCTCCCCCTAGCC +
Preference number: 4 (lower is better)
Translates to: YGLRLGEPPPSPREGGTRATDSG*ENLPLA
Trigger: GGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGC...GCGGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp GCTACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCGCTACGGACTCAGGCTaGGAGAACCTCCCCCTAGCC +
Preference number: 4 (lower is better)
Translates to: ATDSGWENLPLARARAAPATDSG*ENLPLA
Trigger: GGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGC...GGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR TCA 90 bp AGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCGCGGAGGTCCCGCTCCATCATCGTGGTaGGACATGGGGTATGTGCAG +
Preference number: 4 (lower is better)
Translates to: RLGEPPPSPREGGTRGGPAPSSW*DMGYVQ
Trigger: CTGCACATACCCCATGTCTCACCACGATGATGGAGC...GGGACCTCCGCGGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR TCA 90 bp CGGGGCTACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCCCTCACCACCTCGCATaGTCCCACGACTGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: RGYGLRLGEPPPSPREGGPHHLA*SHDCKR
Trigger: CCTTTTGCAGTCGTGGGATCATGCGAGGTGGTGAGG...GCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR TCA 90 bp CGGGGCTACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCGACTCCGGAAGACAGTaGTGCGGTCGGAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: RGYGLRLGEPPPSPREGGDSGRQ*CGRRLC
Trigger: GCACAATCTCCGACCGCATCACTGTCTTCCGGAGTC...GCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp CCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGTGGGTGCGGTCGGAGATTGTaGAGGCCCCGGGCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: PEDSDAVGDCAGPGPGSGCGRRL*RPRAGK
Trigger: CTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCA...CCCACTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp CGGGGCTACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCTCTCCCCACTTCCTCTaGTGGGGCAGGAAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: RGYGLRLGEPPPSPREGGSPHFL*WGRKLS
Trigger: ACTCAGCTTCCTGCCCCACCAGAGGAAGTGGGGAGA...GCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR CCA 90 bp GGCTACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCTGCGGTGCAGCTGGTTaGGGAGGGCAGCAAAACCCA +
Preference number: 4 (lower is better)
Translates to: GYGLRLGEPPPSPREGGTCGAAG*GGQQNP
Trigger: TGGGTTTTGCTGCCCTCCCCAACCAGCTGCACCGCA...GGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp GGCTACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCGCGAGCACTGGCCTCTaGCACCTGGCGATCCTCATA +
Preference number: 4 (lower is better)
Translates to: GYGLRLGEPPPSPREGGTASTGL*HLAILI
Trigger: TATGAGGATCGCCAGGTGCCAGAGGCCAGTGCTCGC...GGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR CCA 90 bp GGCGGGAAAGCTTACTGCGGCTGGCTCGATCGCGAGCCCCAGGCCGGGCCAGGCAAAGCTTACTGCGGCTaGCTCGATCGCGAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GGKAYCGWLDREPQAGPGKAYCG*LDREPQ
Trigger: CTGGGGCTCGCGATCGAGCCAGCCGCAGTAAGCTTT...GCCTGGCCCGGCCTGGGGCTCGCGATCGAGCCAGCCGCAGTAAGCTTTCCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR CCA 90 bp GGGGCGCGGGGATTGGACAAGAGGCCGACTGAAGGCGGAGCCGAGGTAAGGCCGTGCTCGCCCTGGGCCTaGCTCTGCTGCATTTGGGCC +
Preference number: 4 (lower is better)
Translates to: GARGLDKRPTEGGAEVRPCSPWA*LCCIWA
Trigger: GGCCCAAATGCAGCAGAGCCAGGCCCAGGGCGAGCA...CGGCCTTACCTCGGCTCCGCCTTCAGTCGGCCTCTTGTCCAATCCCCGCGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp TACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCGCTCTGACTGCTCGCCCTaGGCCTGGCTCTGCTGCATT +
Preference number: 4 (lower is better)
Translates to: YGLRLGEPPPSPREGGTRSDCSP*AWLCCI
Trigger: AATGCAGCAGAGCCAGGCCCAGGGCGAGCAGTCAGA...GCGGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp AGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGAGGCCGGGCGGGGCGTaGCCTCAGAGGGCGTCTGAC +
Preference number: 4 (lower is better)
Translates to: RRGTPEDSDAVGDCAGPGRPGGA*PQRASD
Trigger: GTCAGACGCCCTCTGAGGCCACGCCCCGCCCGGCCT...CCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp CGGGAAAGCTTACTGCGGCTGGCTCGATCGCGAGCCCCAGGCCGGGCCAGGCTCGTGGGGCGCGGGGATTaGACAAGAGGCCGACTGAAG +
Preference number: 4 (lower is better)
Translates to: RESLLRLARSRAPGRARLVGRGD*TRGRLK
Trigger: CTTCAGTCGGCCTCTTGTCCAATCCCCGCGCCCCAC...GAGCCTGGCCCGGCCTGGGGCTCGCGATCGAGCCAGCCGCAGTAAGCTTTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR CCA 90 bp GGACTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGAAGTGGGCGGTGTCTaGGTGGGCGGGACCAGCGCC +
Preference number: 4 (lower is better)
Translates to: GLRKTVMRSEIVQAPGREEVGGV*VGGTSA
Trigger: GGCGCTGGTCCCGCCCACCCAGACACCGCCCACTTC...TTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp CGGTCCCCCAGGAGTAGCGGCGTCCCCTCACCGGCCGGTTCCCGCCATCCCTCAGCCAGCACTGGCCTCTaGCACCTGGCGATCCTCATA +
Preference number: 4 (lower is better)
Translates to: RSPRSSGVPSPAGSRHPSASTGL*HLAILI
Trigger: TATGAGGATCGCCAGGTGCCAGAGGCCAGTGCTGGC...TGAGGGATGGCGGGAACCGGCCGGTGAGGGGACGCCGCTACTCCTGGGGGACCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR TCA 90 bp AGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCGCGGAGGTCCCTTCAGGAAATCGCAGTaGTGTGGGTTCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: RLGEPPPSPREGGTRGGPFRKSQ*CGFSTS
Trigger: GGAGGTGGAGAACCCACATCACTGCGATTTCCTGAA...GGGACCTCCGCGGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp GCTACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCAGCCATCACTGCACCTaGCGTCTCTCCCCACTTCCT +
Preference number: 4 (lower is better)
Translates to: ATDSGWENLPLARARAAPSHHCT*RLSPLP
Trigger: AGGAAGTGGGGAGAGACGGCAGGTGCAGTGATGGCT...GGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR GCA 90 bp GGGGCGCGGGGATTGGACAAGAGGCCGACTGAAGGCGGAGCCGAGGTAAGGCCGCCCTGGGCCTGGCTCTaGTGCATTTGGGCCTGCATC +
Preference number: 4 (lower is better)
Translates to: GARGLDKRPTEGGAEVRPPWAWL*CIWACI
Trigger: GATGCAGGCCCAAATGCAGCAGAGCCAGGCCCAGGG...CGGCCTTACCTCGGCTCCGCCTTCAGTCGGCCTCTTGTCCAATCCCCGCGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp GGACTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAACAGAGGGCGTCTGACTaGTCGCCCTGGGCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: GLRKTVMRSEIVQAPGREQRASD*SPWAWL
Trigger: GAGCCAGGCCCAGGGCGAGCAGTCAGACGCCCTCTG...TTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp TGGCGGGAAAGCTTACTGCGGCTGGCTCGATCGCGAGCCCCAGGCCGGGCCAGGTGCGGTGCAGCTGGTTaGGGAGGGCAGCAAAACCCA +
Preference number: 4 (lower is better)
Translates to: WRESLLRLARSRAPGRARCGAAG*GGQQNP
Trigger: TGGGTTTTGCTGCCCTCCCCAACCAGCTGCACCGCA...CCTGGCCCGGCCTGGGGCTCGCGATCGAGCCAGCCGCAGTAAGCTTTCCCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR CCA 90 bp TACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCGCATCTCTGTGGCGCTCTaGCGGGAAAGCTTACTGCGG +
Preference number: 4 (lower is better)
Translates to: YGLRLGEPPPSPREGGTRISVAL*RESLLR
Trigger: CCGCAGTAAGCTTTCCCGCCAGAGCGCCACAGAGAT...GCGGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR TCA 90 bp TACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCGCGCTCCATCATCGTGGTaGGACATGGGGTATGTGCAG +
Preference number: 4 (lower is better)
Translates to: YGLRLGEPPPSPREGGTRAPSSW*DMGYVQ
Trigger: CTGCACATACCCCATGTCTCACCACGATGATGGAGC...GCGGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR TCA 90 bp AGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCGCGGAGGTCCCCAAATTGCTCCTCGATaGATTTCACCACCGGAAGCC +
Preference number: 4 (lower is better)
Translates to: RLGEPPPSPREGGTRGGPQIAPR*ISPPEA
Trigger: GGCTTCCGGTGGTGAAATTCATCGAGGAGCAATTTG...GGGACCTCCGCGGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp TACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCGCTTCTCCAGCATCTCTTaGATGCGGCGCAGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: YGLRLGEPPPSPREGGTRFSSIS*MRRSSS
Trigger: CGAAGAGCTGCGCCGCATGCAAGAGATGCTGGAGAA...GCGGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp GGCGGGACCAGCGCCGGGGCGGGGCTACGGACTCAGGCTGGGAGAACCTCCCCCCATCGTGGTGAGACATaGGGTATGTGCAGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: GGTSAGAGLRTQAGRTSPHRGET*GMCREE
Trigger: TTCCTCTCTGCACATACCCCATGTCTCACCACGATG...GGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCCCCGCCCCGGCGCTGGTCCCGCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR CCA 90 bp GGACTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAACGCCCCGGCGCTCAATaGCCAGGGTCTGTGTCAAGC +
Preference number: 4 (lower is better)
Translates to: GLRKTVMRSEIVQAPGRERPGAQ*PGSVSS
Trigger: GCTTGACACAGACCCTGGCCATTGAGCGCCGGGGCG...TTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR CCA 90 bp CGGGGATTGGACAAGAGGCCGACTGAAGGCGGAGCCGAGGTAAGGCCGGGCGGGAGGGCCTGGGTTTCCTaGGGCATCAGAGCATCCGCT +
Preference number: 4 (lower is better)
Translates to: RGLDKRPTEGGAEVRPGGRAWVS*GIRASA
Trigger: AGCGGATGCTCTGATGCCCCAGGAAACCCAGGCCCT...CCCGCCCGGCCTTACCTCGGCTCCGCCTTCAGTCGGCCTCTTGTCCAATCCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp GGCTACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCTTCTGCTTGAGGGCCTaGGTTTCCTGGGGCATCAGA +
Preference number: 4 (lower is better)
Translates to: GYGLRLGEPPPSPREGGTFCLRA*VSWGIR
Trigger: TCTGATGCCCCAGGAAACCCAGGCCCTCAAGCAGAA...GGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp CGGGGCTACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCGAAATCGCAGTGATGTaGGTTCTCCACCTCCACGGT +
Preference number: 4 (lower is better)
Translates to: RGYGLRLGEPPPSPREGGEIAVM*VLHLHG
Trigger: ACCGTGGAGGTGGAGAACCCACATCACTGCGATTTC...GCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCCCCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR TCA 90 bp GGGCGGGGCTACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCCAAATTGCTCCTCGATaGATTTCACCACCGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GRGYGLRLGEPPPSPREGQIAPR*ISPPEA
Trigger: GGCTTCCGGTGGTGAAATTCATCGAGGAGCAATTTG...GCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCCCCGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR TCA 90 bp GGCGGGACCAGCGCCGGGGCGGGGCTACGGACTCAGGCTGGGAGAACCTCCCCCCTGCATCCTGCCTCTTaGAGTCTTCATCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: GGTSAGAGLRTQAGRTSPLHPAS*SLHLHQ
Trigger: CTGATGAAGATGAAGACTTCAAGAGGCAGGATGCAG...GGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCCCCGCCCCGGCGCTGGTCCCGCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR TCA 90 bp GGCTACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCTTCAGGAAATCGCAGTaGTGTGGGTTCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: GYGLRLGEPPPSPREGGTFRKSQ*CGFSTS
Trigger: GGAGGTGGAGAACCCACATCACTGCGATTTCCTGAA...GGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp GGACTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAATCCGCCAGCCATCACTaGACCTGCCGTCTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: GLRKTVMRSEIVQAPGRESASHH*TCRLSP
Trigger: TGGGGAGAGACGGCAGGTGCAGTGATGGCTGGCGGA...TTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR CCA 90 bp GGGGCGCGGGGATTGGACAAGAGGCCGACTGAAGGCGGAGCCGAGGTAAGGCCGTCTCCCCACTTCCTCTaGTGGGGCAGGAAGCTGAGT +
Preference number: 4 (lower is better)
Translates to: GARGLDKRPTEGGAEVRPSPHFL*WGRKLS
Trigger: ACTCAGCTTCCTGCCCCACCAGAGGAAGTGGGGAGA...CGGCCTTACCTCGGCTCCGCCTTCAGTCGGCCTCTTGTCCAATCCCCGCGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR CCA 90 bp CGGGGATTGGACAAGAGGCCGACTGAAGGCGGAGCCGAGGTAAGGCCGGGCGGGGACTTGCGGTGCAGCTaGTTGGGGAGGGCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: RGLDKRPTEGGAEVRPGGDLRCS*LGRAAK
Trigger: TTTTGCTGCCCTCCCCAACCAGCTGCACCGCAAGTC...CCCGCCCGGCCTTACCTCGGCTCCGCCTTCAGTCGGCCTCTTGTCCAATCCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp ACTGAAGGCGGAGCCGAGGTAAGGCCGGGCGGGGCGTGGCCTCAGAGGGCGTCTTGGACTCGGGAGTCCTaGATGTTCTTCCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: TEGGAEVRPGGAWPQRASWTRES*MFFRFR
Trigger: CCTGAACCGGAAGAACATCCAGGACTCCCGAGTCCA...AGACGCCCTCTGAGGCCACGCCCCGCCCGGCCTTACCTCGGCTCCGCCTTCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR CCA 90 bp CGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGTGGGCAAAGCTTACTGCGGCTaGCTCGATCGCGAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: RKTVMRSEIVQAPGREVGKAYCG*LDREPQ
Trigger: CTGGGGCTCGCGATCGAGCCAGCCGCAGTAAGCTTT...GCCCACTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp CTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGTGGCAGCGGGATCTCTGTaGCGCTCTGGCGGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: LRKTVMRSEIVQAPGREVAAGSL*RSGGKA
Trigger: AGCTTTCCCGCCAGAGCGCCACAGAGATCCCGCTGC...CACTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp GGACTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGTGGGGCGCGGGGATTaGACAAGAGGCCGACTGAAG +
Preference number: 4 (lower is better)
Translates to: GLRKTVMRSEIVQAPGREVGRGD*TRGRLK
Trigger: CTTCAGTCGGCCTCTTGTCCAATCCCCGCGCCCCAC...TTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAGTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR TCA 90 bp ACTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGTCCCGGATCTTCTGCTTaGGGGCCTGGGTTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TPEDSDAVGDCAGPGPGSPGSSA*GPGFPG
Trigger: CCCAGGAAACCCAGGCCCTCAAGCAGAAGATCCGGG...ACTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR TCA 90 bp GCTACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCTCCTCTTCCTTCAACTaGTCCCGGATCTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ATDSGWENLPLARARAAPSSSFN*SRIFCL
Trigger: CAAGCAGAAGATCCGGGATCAGTTGAAGGAAGAGGA...GGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp GGACTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGGGCAGGAAGCTGAGTaGGGCTTCAACCCTCCATCC +
Preference number: 4 (lower is better)
Translates to: GLRKTVMRSEIVQAPGREGQEAE*GFNPPS
Trigger: GGATGGAGGGTTGAAGCCGCACTCAGCTTCCTGCCC...TTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR GCA 90 bp GGGCAGTGTGGGGCGCGGGGATTGGACAAGAGGCCGACTGAAGGCGGAGCCGAGCCAGCATCTCTTGCATaGGGCGCAGCTCTTCGTCTT +
Preference number: 4 (lower is better)
Translates to: GQCGARGLDKRPTEGGAEPASLA*GAALRL
Trigger: AAGACGAAGAGCTGCGCCGCATGCAAGAGATGCTGG...CTCGGCTCCGCCTTCAGTCGGCCTCTTGTCCAATCCCCGCGCCCCACACTGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp GGCAGTGTGGGGCGCGGGGATTGGACAAGAGGCCGACTGAAGGCGGAGCCGAGGTTCTCCAGCATCTCTTaGATGCGGCGCAGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: GSVGRGDWTRGRLKAEPRFSSIS*MRRSSS
Trigger: CGAAGAGCTGCGCCGCATGCAAGAGATGCTGGAGAA...CCTCGGCTCCGCCTTCAGTCGGCCTCTTGTCCAATCCCCGCGCCCCACACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp CCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGTGGGGACTTGCGGTGCAGCTaGTTGGGGAGGGCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: PEDSDAVGDCAGPGPGSGDLRCS*LGRAAK
Trigger: TTTTGCTGCCCTCCCCAACCAGCTGCACCGCAAGTC...CCCACTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp GGCAGTGTGGGGCGCGGGGATTGGACAAGAGGCCGACTGAAGGCGGAGCCGAGGTGGACTCGGGAGTCCTaGATGTTCTTCCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: GSVGRGDWTRGRLKAEPRWTRES*MFFRFR
Trigger: CCTGAACCGGAAGAACATCCAGGACTCCCGAGTCCA...CCTCGGCTCCGCCTTCAGTCGGCCTCTTGTCCAATCCCCGCGCCCCACACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp CAGTGTGGGGCGCGGGGATTGGACAAGAGGCCGACTGAAGGCGGAGCCGAGGTAAGGGCCTGGGTTTCCTaGGGCATCAGAGCATCCGCT +
Preference number: 4 (lower is better)
Translates to: QCGARGLDKRPTEGGAEVRAWVS*GIRASA
Trigger: AGCGGATGCTCTGATGCCCCAGGAAACCCAGGCCCT...TACCTCGGCTCCGCCTTCAGTCGGCCTCTTGTCCAATCCCCGCGCCCCACACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp CCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGTGGGATCTCTGTGGCGCTCTaGCGGGAAAGCTTACTGCGG +
Preference number: 4 (lower is better)
Translates to: PEDSDAVGDCAGPGPGSGISVAL*RESLLR
Trigger: CCGCAGTAAGCTTTCCCGCCAGAGCGCCACAGAGAT...CCCACTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp GAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGATTGTAGGCCGGGCGGGGCGTaGCCTCAGAGGGCGTCTGAC +
Preference number: 4 (lower is better)
Translates to: ESGRRRGTPEDSDAVGDCRPGGA*PQRASD
Trigger: GTCAGACGCCCTCTGAGGCCACGCCCCGCCCGGCCT...ACAATCTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR TCA 90 bp TGGCGGGAAAGCTTACTGCGGCTGGCTCGATCGCGAGCCCCAGGCCGGGCCAGGTCCTCTTCCTTCAACTaGTCCCGGATCTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: WRESLLRLARSRAPGRARSSSFN*SRIFCL
Trigger: CAAGCAGAAGATCCGGGATCAGTTGAAGGAAGAGGA...CCTGGCCCGGCCTGGGGCTCGCGATCGAGCCAGCCGCAGTAAGCTTTCCCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR TCA 90 bp CGCAGCTCTTCGTCTTTCTCGCGGATCAGCTTCTCGGTGTCCGCCAGAGGCAGCGGACAAGAGGCCGACTaGAGGCGGAGCCGAGGTAAG +
Preference number: 4 (lower is better)
Translates to: RSSSSFSRISFSVSARGSGQEAD*RRSRGK
Trigger: CTTACCTCGGCTCCGCCTTCAGTCGGCCTCTTGTCC...GCTGCCTCTGGCGGACACCGAGAAGCTGATCCGCGAGAAAGACGAAGAGCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR TCA 90 bp CAGTGTGGGGCGCGGGGATTGGACAAGAGGCCGACTGAAGGCGGAGCCGAGGTAGACTCCGGAAGACAGTaGTGCGGTCGGAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: QCGARGLDKRPTEGGAEVDSGRQ*CGRRLC
Trigger: GCACAATCTCCGACCGCATCACTGTCTTCCGGAGTC...TACCTCGGCTCCGCCTTCAGTCGGCCTCTTGTCCAATCCCCGCGCCCCACACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp CCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGTGGGGACTTTCTCGTGTACTaGCCGGAGGAAGGCCACATC +
Preference number: 4 (lower is better)
Translates to: PEDSDAVGDCAGPGPGSGDFLVY*PEEGHI
Trigger: GATGTGGCCTTCCTCCGGGCAGTACACGAGAAAGTC...CCCACTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp ACTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGTTCCTGCAGGTGTGTCTaGACCAGCATCCGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: TPEDSDAVGDCAGPGPGSSCRCV*TSIRRR
Trigger: CCTGCGACGGATGCTGGTGCAGACACACCTGCAGGA...ACTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp CCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGTGGGTTCTCCAGCATCTCTTaGATGCGGCGCAGCTCTTCG +
Preference number: 4 (lower is better)
Translates to: PEDSDAVGDCAGPGPGSGFSSIS*MRRSSS
Trigger: CGAAGAGCTGCGCCGCATGCAAGAGATGCTGGAGAA...CCCACTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp CTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGTGGACTTGCGGTGCAGCTaGTTGGGGAGGGCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: LRKTVMRSEIVQAPGREVDLRCS*LGRAAK
Trigger: TTTTGCTGCCCTCCCCAACCAGCTGCACCGCAAGTC...CACTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp ACTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGTGTGTCAAGCGAGCACTaGCCTCTGGCACCTGGCGAT +
Preference number: 4 (lower is better)
Translates to: TPEDSDAVGDCAGPGPGSVSSEH*PLAPGD
Trigger: ATCGCCAGGTGCCAGAGGCCAGTGCTCGCTTGACAC...ACTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR CCA 90 bp GGGGCGCGGGGATTGGACAAGAGGCCGACTGAAGGCGGAGCCGAGGTAAGGCCGGAAATCGCAGTGATGTaGGTTCTCCACCTCCACGGT +
Preference number: 4 (lower is better)
Translates to: GARGLDKRPTEGGAEVRPEIAVM*VLHLHG
Trigger: ACCGTGGAGGTGGAGAACCCACATCACTGCGATTTC...CGGCCTTACCTCGGCTCCGCCTTCAGTCGGCCTCTTGTCCAATCCCCGCGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR TCA 90 bp ACTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGTCCTCACCACCTCGCATaGTCCCACGACTGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: TPEDSDAVGDCAGPGPGSPHHLA*SHDCKR
Trigger: CCTTTTGCAGTCGTGGGATCATGCGAGGTGGTGAGG...ACTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp CGGGGCTACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCAGGTACTGCTCAAATTaGTCCTCGATGAATTTCACC +
Preference number: 4 (lower is better)
Translates to: RGYGLRLGEPPPSPREGGRYCSN*SSMNFT
Trigger: GGTGAAATTCATCGAGGAGCAATTTGAGCAGTACCT...GCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp TCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCGCGGAGGTCAGGTACTGCTCAAATTaGTCCTCGATGAATTTCACC +
Preference number: 4 (lower is better)
Translates to: SGWENLPLARARAAPAEVRYCSN*SSMNFT
Trigger: GGTGAAATTCATCGAGGAGCAATTTGAGCAGTACCT...GACCTCCGCGGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp GGCTACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCGACTGCAAAAGGGATaGTTTCCTTCATCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: GYGLRLGEPPPSPREGGTRLQKG*FPSSLH
Trigger: ATGCAGAGATGAAGGAAAGCATCCCTTTTGCAGTCG...GGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp GGGCAGTGTGGGGCGCGGGGATTGGACAAGAGGCCGACTGAAGGCGGAGCCGAGTGCTGCATTTGGGCCTaGATCTTCTCCAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: GQCGARGLDKRPTEGGAECCIWA*IFSSIS
Trigger: AGAGATGCTGGAGAAGATGCAGGCCCAAATGCAGCA...CTCGGCTCCGCCTTCAGTCGGCCTCTTGTCCAATCCCCGCGCCCCACACTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp GCTACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCCATCCTTCACACATCTaGATTCCAAGTCCCACTGTA +
Preference number: 4 (lower is better)
Translates to: ATDSGWENLPLARARAAPHPSHI*IPSPTV
Trigger: TACAGTGGGACTTGGAATCCAGATGTGTGAAGGATG...GGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR CCA 90 bp TACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCGCCGCTTTGCCAATGACTaGGATGATGTTGACTTTCTC +
Preference number: 4 (lower is better)
Translates to: YGLRLGEPPPSPREGGTRRFAND*DDVDFL
Trigger: GAGAAAGTCAACATCATCCCAGTCATTGGCAAAGCG...GCGGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp GCGCAGCTCTTCGTCTTTCTCGCGGATCAGCTTCTCGGTGTCCGCCAGAGGCAGTCTGACTGCTCGCCCTaGGCCTGGCTCTGCTGCATT +
Preference number: 4 (lower is better)
Translates to: AQLFVFLADQLLGVRQRQSDCSP*AWLCCI
Trigger: AATGCAGCAGAGCCAGGCCCAGGGCGAGCAGTCAGA...CTGCCTCTGGCGGACACCGAGAAGCTGATCCGCGAGAAAGACGAAGAGCTGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR CCA 90 bp CTTTCAGGTCCTGCAGGTGTGTCTGCACCAGCATCCGTCGCAGGTTCAGGAAATGAAGTGGGCGGTGTCTaGGTGGGCGGGACCAGCGCC +
Preference number: 4 (lower is better)
Translates to: LSGPAGVSAPASVAGSGNEVGGV*VGGTSA
Trigger: GGCGCTGGTCCCGCCCACCCAGACACCGCCCACTTC...ATTTCCTGAACCTGCGACGGATGCTGGTGCAGACACACCTGCAGGACCTGAAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR CCA 90 bp GGAGAAGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCTGCGGTGCAGCTGGTTaGGGAGGGCAGCAAAACCCA +
Preference number: 4 (lower is better)
Translates to: GEEGGLRKTVMRSEIVQACGAAG*GGQQNP
Trigger: TGGGTTTTGCTGCCCTCCCCAACCAGCTGCACCGCA...GGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp AGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGTTCTGCTTGAGGGCCTaGGTTTCCTGGGGCATCAGA +
Preference number: 4 (lower is better)
Translates to: RRGTPEDSDAVGDCAGPGFCLRA*VSWGIR
Trigger: TCTGATGCCCCAGGAAACCCAGGCCCTCAAGCAGAA...CCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp ACAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGATTGCTCGCCCTGGGCCTaGCTCTGCTGCATTTGGGCC +
Preference number: 4 (lower is better)
Translates to: TESGRRRGTPEDSDAVGDCSPWA*LCCIWA
Trigger: GGCCCAAATGCAGCAGAGCCAGGCCCAGGGCGAGCA...ATCTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp CAGGTCCTGCAGGTGTGTCTGCACCAGCATCCGTCGCAGGTTCAGGAAATCGCAACCGGAAGCCAGCACTaGCCTCTGGCACCTGGCGAT +
Preference number: 4 (lower is better)
Translates to: QVLQVCLHQHPSQVQEIATGSQH*PLAPGD
Trigger: ATCGCCAGGTGCCAGAGGCCAGTGCTGGCTTCCGGT...TGCGATTTCCTGAACCTGCGACGGATGCTGGTGCAGACACACCTGCAGGACCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR TCA 90 bp CTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGTGTCCTCTTCCTTCAACTaGTCCCGGATCTTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LRKTVMRSEIVQAPGREVSSSFN*SRIFCL
Trigger: CAAGCAGAAGATCCGGGATCAGTTGAAGGAAGAGGA...CACTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp GCGCAGCTCTTCGTCTTTCTCGCGGATCAGCTTCTCGGTGTCCGCCAGAGGCAGGACTTTCTCGTGTACTaGCCGGAGGAAGGCCACATC +
Preference number: 4 (lower is better)
Translates to: AQLFVFLADQLLGVRQRQDFLVY*PEEGHI
Trigger: GATGTGGCCTTCCTCCGGGCAGTACACGAGAAAGTC...CTGCCTCTGGCGGACACCGAGAAGCTGATCCGCGAGAAAGACGAAGAGCTGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR GCA 90 bp AGACAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGTCCTGCAGGTGTGTCTaGACCAGCATCCGTCGCAGG +
Preference number: 4 (lower is better)
Translates to: RQSLGEEGGLRKTVMRSESCRCV*TSIRRR
Trigger: CCTGCGACGGATGCTGGTGCAGACACACCTGCAGGA...CTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTCTGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp ACTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGTCAGAGAGGAAGGAAGTaGCTCCCTTTGTTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: TPEDSDAVGDCAGPGPGSQRGRK*LPLLAG
Trigger: CCCTGCTAACAAAGGGAGCCACTTCCTTCCTCTCTG...ACTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR CCA 90 bp CGGGGATTGGACAAGAGGCCGACTGAAGGCGGAGCCGAGGTAAGGCCGGGCGGGCGCTTTGCCAATGACTaGGATGATGTTGACTTTCTC +
Preference number: 4 (lower is better)
Translates to: RGLDKRPTEGGAEVRPGGRFAND*DDVDFL
Trigger: GAGAAAGTCAACATCATCCCAGTCATTGGCAAAGCG...CCCGCCCGGCCTTACCTCGGCTCCGCCTTCAGTCGGCCTCTTGTCCAATCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp GCGCAGCTCTTCGTCTTTCTCGCGGATCAGCTTCTCGGTGTCCGCCAGAGGCAGTGGCTCTGCTGCATTTaGGCCTGCATCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AQLFVFLADQLLGVRQRQWLCCI*ACIFSS
Trigger: GCTGGAGAAGATGCAGGCCCAAATGCAGCAGAGCCA...CTGCCTCTGGCGGACACCGAGAAGCTGATCCGCGAGAAAGACGAAGAGCTGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR CCA 90 bp CTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGTGATTGAAGACAGAGTCTaGGAGAAGAAGGGGGACTCC +
Preference number: 4 (lower is better)
Translates to: LRKTVMRSEIVQAPGREVIEDRV*EKKGDS
Trigger: GGAGTCCCCCTTCTTCTCCCAGACTCTGTCTTCAAT...CACTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR TCA 90 bp GCCGCGGGAAGCTCAGTTTTTATTGAAGACAGAGTCTGGGAGAAGAAGGGGGACGGTGGGGCAGGAAGCTaGGTGCGGCTTCAACCCTCC +
Preference number: 4 (lower is better)
Translates to: AAGSSVFIEDRVWEKKGDGGAGS*VRLQPS
Trigger: GGAGGGTTGAAGCCGCACTCAGCTTCCTGCCCCACC...GTCCCCCTTCTTCTCCCAGACTCTGTCTTCAATAAAAACTGAGCTTCCCGCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR TCA 90 bp AGACAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGCCTCACCACCTCGCATaGTCCCACGACTGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: RQSLGEEGGLRKTVMRSEPHHLA*SHDCKR
Trigger: CCTTTTGCAGTCGTGGGATCATGCGAGGTGGTGAGG...CTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTCTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp CAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGATTGGGCAGGAAGCTGAGTaGGGCTTCAACCCTCCATCC +
Preference number: 4 (lower is better)
Translates to: QSLGEEGGLRKTVMRSEIGQEAE*GFNPPS
Trigger: GGATGGAGGGTTGAAGCCGCACTCAGCTTCCTGCCC...AATCTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR CCA 90 bp ACAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGATAAAGCTTACTGCGGCTaGCTCGATCGCGAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: TESGRRRGTPEDSDAVGDKAYCG*LDREPQ
Trigger: CTGGGGCTCGCGATCGAGCCAGCCGCAGTAAGCTTT...ATCTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp CAGTTTTTATTGAAGACAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTAGGCCGGGCGGGGCGTaGCCTCAGAGGGCGTCTGAC +
Preference number: 4 (lower is better)
Translates to: QFLLKTESGRRRGTPEDSRPGGA*PQRASD
Trigger: GTCAGACGCCCTCTGAGGCCACGCCCCGCCCGGCCT...ACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTCTGTCTTCAATAAAAACTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR CCA 90 bp ATGACTGGGATGATGTTGACTTTCTCGTGTACTGCCCGGAGGAAGGCCACATCTGGGCGCTGGGCAGTGTaGGGCGCGGGGATTGGACAA +
Preference number: 4 (lower is better)
Translates to: MTGMMLTFSCTARRKATSGRWAV*GAGIGQ
Trigger: TTGTCCAATCCCCGCGCCCCACACTGCCCAGCGCCC...AGATGTGGCCTTCCTCCGGGCAGTACACGAGAAAGTCAACATCATCCCAGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR TCA 90 bp GCTCTTCGTCTTTCTCGCGGATCAGCTTCTCGGTGTCCGCCAGAGGCAGCATGGTTCAGGAAATCGCAGTaGTGTGGGTTCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: ALRLSRGSASRCPPEAAWFRKSQ*CGFSTS
Trigger: GGAGGTGGAGAACCCACATCACTGCGATTTCCTGAA...CCATGCTGCCTCTGGCGGACACCGAGAAGCTGATCCGCGAGAAAGACGAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR CCA 90 bp AGACAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGTGGACTCGGGAGTCCTaGATGTTCTTCCGGTTCAGG +
Preference number: 4 (lower is better)
Translates to: RQSLGEEGGLRKTVMRSEWTRES*MFFRFR
Trigger: CCTGAACCGGAAGAACATCCAGGACTCCCGAGTCCA...CTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTCTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp CAGGTCCTGCAGGTGTGTCTGCACCAGCATCCGTCGCAGGTTCAGGAAATCGCATTCTGCTTGAGGGCCTaGGTTTCCTGGGGCATCAGA +
Preference number: 4 (lower is better)
Translates to: QVLQVCLHQHPSQVQEIAFCLRA*VSWGIR
Trigger: TCTGATGCCCCAGGAAACCCAGGCCCTCAAGCAGAA...TGCGATTTCCTGAACCTGCGACGGATGCTGGTGCAGACACACCTGCAGGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR CCA 90 bp AGACAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGTGGCTCTGCTGCATTTaGGCCTGCATCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: RQSLGEEGGLRKTVMRSEWLCCI*ACIFSS
Trigger: GCTGGAGAAGATGCAGGCCCAAATGCAGCAGAGCCA...CTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTCTGTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp GCCGCGGGAAGCTCAGTTTTTATTGAAGACAGAGTCTGGGAGAAGAAGGGGGACGTGGGGCGCGGGGATTaGACAAGAGGCCGACTGAAG +
Preference number: 4 (lower is better)
Translates to: AAGSSVFIEDRVWEKKGDVGRGD*TRGRLK
Trigger: CTTCAGTCGGCCTCTTGTCCAATCCCCGCGCCCCAC...GTCCCCCTTCTTCTCCCAGACTCTGTCTTCAATAAAAACTGAGCTTCCCGCGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR TCA 90 bp CCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGTGGGAAGCTCAGTTTTTATTaGAGACAGAGTCTGGGAGAA +
Preference number: 4 (lower is better)
Translates to: PEDSDAVGDCAGPGPGSGKLSFY*RQSLGE
Trigger: TTCTCCCAGACTCTGTCTTCAATAAAAACTGAGCTT...CCCACTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR GCA 90 bp CAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGATTGACTTTCTCGTGTACTaGCCGGAGGAAGGCCACATC +
Preference number: 4 (lower is better)
Translates to: QSLGEEGGLRKTVMRSEIDFLVY*PEEGHI
Trigger: GATGTGGCCTTCCTCCGGGCAGTACACGAGAAAGTC...AATCTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp ACAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGATCCAGCATCTCTTGCATaGGGCGCAGCTCTTCGTCTT +
Preference number: 4 (lower is better)
Translates to: TESGRRRGTPEDSDAVGDPASLA*GAALRL
Trigger: AAGACGAAGAGCTGCGCCGCATGCAAGAGATGCTGG...ATCTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp CAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGATTCCAGCATCTCTTGCATaGGGCGCAGCTCTTCGTCTT +
Preference number: 4 (lower is better)
Translates to: QSLGEEGGLRKTVMRSEIPASLA*GAALRL
Trigger: AAGACGAAGAGCTGCGCCGCATGCAAGAGATGCTGG...AATCTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp GCTCTTCGTCTTTCTCGCGGATCAGCTTCTCGGTGTCCGCCAGAGGCAGCATGGTGCTGCATTTGGGCCTaGATCTTCTCCAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: ALRLSRGSASRCPPEAAWCCIWA*IFSSIS
Trigger: AGAGATGCTGGAGAAGATGCAGGCCCAAATGCAGCA...CCATGCTGCCTCTGGCGGACACCGAGAAGCTGATCCGCGAGAAAGACGAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR CCA 90 bp GGAGAAGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCATCGTGGTGAGACATaGGGTATGTGCAGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: GEEGGLRKTVMRSEIVQAHRGET*GMCREE
Trigger: TTCCTCTCTGCACATACCCCATGTCTCACCACGATG...GGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR CCA 90 bp ATGGGCAGCGGGATCTCTGTGGCGCTCTGGCGGGAAAGCTTACTGCGGCTGGCTCGCTTTGCCAATGACTaGGATGATGTTGACTTTCTC +
Preference number: 4 (lower is better)
Translates to: MGSGISVALWRESLLRLARFAND*DDVDFL
Trigger: GAGAAAGTCAACATCATCCCAGTCATTGGCAAAGCG...AGCCAGCCGCAGTAAGCTTTCCCGCCAGAGCGCCACAGAGATCCCGCTGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR CCA 90 bp ATGACTGGGATGATGTTGACTTTCTCGTGTACTGCCCGGAGGAAGGCCACATCTGCAGCGGGATCTCTGTaGCGCTCTGGCGGGAAAGCT +
Preference number: 4 (lower is better)
Translates to: MTGMMLTFSCTARRKATSAAGSL*RSGGKA
Trigger: AGCTTTCCCGCCAGAGCGCCACAGAGATCCCGCTGC...AGATGTGGCCTTCCTCCGGGCAGTACACGAGAAAGTCAACATCATCCCAGTCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR CCA 90 bp GAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGATTGTTGGCTCTGCTGCATTTaGGCCTGCATCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: ESGRRRGTPEDSDAVGDCWLCCI*ACIFSS
Trigger: GCTGGAGAAGATGCAGGCCCAAATGCAGCAGAGCCA...ACAATCTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CCA 90 bp CAGTTTTTATTGAAGACAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTGGGCGCTGGGCAGTGTaGGGCGCGGGGATTGGACAA +
Preference number: 4 (lower is better)
Translates to: QFLLKTESGRRRGTPEDSGRWAV*GAGIGQ
Trigger: TTGTCCAATCCCCGCGCCCCACACTGCCCAGCGCCC...ACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTCTGTCTTCAATAAAAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR CCA 90 bp GCTCTTCGTCTTTCTCGCGGATCAGCTTCTCGGTGTCCGCCAGAGGCAGCATGGATTGAAGACAGAGTCTaGGAGAAGAAGGGGGACTCC +
Preference number: 4 (lower is better)
Translates to: ALRLSRGSASRCPPEAAWIEDRV*EKKGDS
Trigger: GGAGTCCCCCTTCTTCTCCCAGACTCTGTCTTCAAT...CCATGCTGCCTCTGGCGGACACCGAGAAGCTGATCCGCGAGAAAGACGAAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR TCA 90 bp CCCTCACCACCTCGCATGATCCCACGACTGCAAAAGGGATGCTTTCCTTCATCTGACTCCGGAAGACAGTaGTGCGGTCGGAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: PSPPRMIPRLQKGCFPSSDSGRQ*CGRRLC
Trigger: GCACAATCTCCGACCGCATCACTGTCTTCCGGAGTC...AGATGAAGGAAAGCATCCCTTTTGCAGTCGTGGGATCATGCGAGGTGGTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR GCA 90 bp GGGATGCTTTCCTTCATCTCTGCATCCTGCCTCTTGAAGTCTTCATCTTCATCATGCGGTCGGAGATTGTaGAGGCCCCGGGCCGGGAAG +
Preference number: 4 (lower is better)
Translates to: GMLSFISASCLLKSSSSSCGRRL*RPRAGK
Trigger: CTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCA...TGATGAAGATGAAGACTTCAAGAGGCAGGATGCAGAGATGAAGGAAAGCATCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR CCA 90 bp GAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGATTGTCAGAGAGGAAGGAAGTaGCTCCCTTTGTTAGCAGGG +
Preference number: 4 (lower is better)
Translates to: ESGRRRGTPEDSDAVGDCQRGRK*LPLLAG
Trigger: CCCTGCTAACAAAGGGAGCCACTTCCTTCCTCTCTG...ACAATCTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR TCA 90 bp CAGTTTTTATTGAAGACAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTCCCGGATCTTCTGCTTaGGGGCCTGGGTTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: QFLLKTESGRRRGTPEDSPGSSA*GPGFPG
Trigger: CCCAGGAAACCCAGGCCCTCAAGCAGAAGATCCGGG...ACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTCTGTCTTCAATAAAAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR TCA 90 bp GAAGCTCAGTTTTTATTGAAGACAGAGTCTGGGAGAAGAAGGGGGACTCCGGAACCCGGATCTTCTGCTTaGGGGCCTGGGTTTCCTGGG +
Preference number: 4 (lower is better)
Translates to: EAQFLLKTESGRRRGTPEPGSSA*GPGFPG
Trigger: CCCAGGAAACCCAGGCCCTCAAGCAGAAGATCCGGG...TTCCGGAGTCCCCCTTCTTCTCCCAGACTCTGTCTTCAATAAAAACTGAGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR GCA 90 bp CAGTTTTTATTGAAGACAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTCCCTGGGCCTGGCTCTaGTGCATTTGGGCCTGCATC +
Preference number: 4 (lower is better)
Translates to: QFLLKTESGRRRGTPEDSPWAWL*CIWACI
Trigger: GATGCAGGCCCAAATGCAGCAGAGCCAGGCCCAGGG...ACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTCTGTCTTCAATAAAAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR CCA 90 bp CTTTCAGGTCCTGCAGGTGTGTCTGCACCAGCATCCGTCGCAGGTTCAGGAAATGAAATCGCAGTGATGTaGGTTCTCCACCTCCACGGT +
Preference number: 4 (lower is better)
Translates to: LSGPAGVSAPASVAGSGNEIAVM*VLHLHG
Trigger: ACCGTGGAGGTGGAGAACCCACATCACTGCGATTTC...ATTTCCTGAACCTGCGACGGATGCTGGTGCAGACACACCTGCAGGACCTGAAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR TCA 90 bp CTTTCAGGTCCTGCAGGTGTGTCTGCACCAGCATCCGTCGCAGGTTCAGGAAATCAAATTGCTCCTCGATaGATTTCACCACCGGAAGCC +
Preference number: 4 (lower is better)
Translates to: LSGPAGVSAPASVAGSGNQIAPR*ISPPEA
Trigger: GGCTTCCGGTGGTGAAATTCATCGAGGAGCAATTTG...ATTTCCTGAACCTGCGACGGATGCTGGTGCAGACACACCTGCAGGACCTGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR TCA 90 bp ATGATGTTGACTTTCTCGTGTACTGCCCGGAGGAAGGCCACATCTAGGGGCCGGCTGCATCCTGCCTCTTaGAGTCTTCATCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: MMLTFSCTARRKATSRGRLHPAS*SLHLHQ
Trigger: CTGATGAAGATGAAGACTTCAAGAGGCAGGATGCAG...CCGGCCCCTAGATGTGGCCTTCCTCCGGGCAGTACACGAGAAAGTCAACATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR GCA 90 bp GGAGAAGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCTTCATCTCTGCATCCTaGCTCTTGAAGTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: GEEGGLRKTVMRSEIVQAFISAS*LLKSSS
Trigger: AGATGAAGACTTCAAGAGGCAGGATGCAGAGATGAA...GGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp GAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCTTTCCTTCATCTCTaGATCCTGCCTCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: ESGRRRGTPEDSDAVGDCAFLHL*ILPLEV
Trigger: GACTTCAAGAGGCAGGATGCAGAGATGAAGGAAAGC...ACAATCTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
3UTR CAA 72 bp ATCAGAGCATCCGCTTTGCCAATGACTGGGATGATGTaGACTTTCTCGTGTACTGCCCGGAGGAAGGCCACA +
Preference number: 4 (lower is better)
Translates to: IRASALPMTGMM*TFSCTARRKAT
Trigger: TGTGGCCTTCCTCCGGGCAGTACACGAGAAAGTCAACATCATCCCAGTCATTGGCAAAGCGGATGCTCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR TCA 90 bp CAGTTTTTATTGAAGACAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTCGTACTCCTTGTCCATaGCTCCGCCAGCCATCACTG +
Preference number: 4 (lower is better)
Translates to: QFLLKTESGRRRGTPEDSRTPCP*LRQPSL
Trigger: CAGTGATGGCTGGCGGAGTCATGGACAAGGAGTACG...ACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTCTGTCTTCAATAAAAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR GCA 90 bp ATGATGTTGACTTTCTCGTGTACTGCCCGGAGGAAGGCCACATCTAGGGGCCGGCGACTGCAAAAGGGATaGTTTCCTTCATCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: MMLTFSCTARRKATSRGRRLQKG*FPSSLH
Trigger: ATGCAGAGATGAAGGAAAGCATCCCTTTTGCAGTCG...CCGGCCCCTAGATGTGGCCTTCCTCCGGGCAGTACACGAGAAAGTCAACATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR GCA 90 bp ACAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGATCGACTGCAAAAGGGATaGTTTCCTTCATCTCTGCAT +
Preference number: 4 (lower is better)
Translates to: TESGRRRGTPEDSDAVGDRLQKG*FPSSLH
Trigger: ATGCAGAGATGAAGGAAAGCATCCCTTTTGCAGTCG...ATCTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR TCA 90 bp GCCGCGGGAAGCTCAGTTTTTATTGAAGACAGAGTCTGGGAGAAGAAGGGGGACCTGCATCCTGCCTCTTaGAGTCTTCATCTTCATCAG +
Preference number: 4 (lower is better)
Translates to: AAGSSVFIEDRVWEKKGDLHPAS*SLHLHQ
Trigger: CTGATGAAGATGAAGACTTCAAGAGGCAGGATGCAG...GTCCCCCTTCTTCTCCCAGACTCTGTCTTCAATAAAAACTGAGCTTCCCGCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR GCA 90 bp CAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGATTTTCATCTCTGCATCCTaGCTCTTGAAGTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: QSLGEEGGLRKTVMRSEIFISAS*LLKSSS
Trigger: AGATGAAGACTTCAAGAGGCAGGATGCAGAGATGAA...AATCTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp GAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGATTGTTTCATCTCTGCATCCTaGCTCTTGAAGTCTTCATCT +
Preference number: 4 (lower is better)
Translates to: ESGRRRGTPEDSDAVGDCFISAS*LLKSSS
Trigger: AGATGAAGACTTCAAGAGGCAGGATGCAGAGATGAA...ACAATCTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR GCA 90 bp GCCGCGGGAAGCTCAGTTTTTATTGAAGACAGAGTCTGGGAGAAGAAGGGGGACGCTTTCCTTCATCTCTaGATCCTGCCTCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: AAGSSVFIEDRVWEKKGDAFLHL*ILPLEV
Trigger: GACTTCAAGAGGCAGGATGCAGAGATGAAGGAAAGC...GTCCCCCTTCTTCTCCCAGACTCTGTCTTCAATAAAAACTGAGCTTCCCGCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR GCA 90 bp GCCGCGGGAAGCTCAGTTTTTATTGAAGACAGAGTCTGGGAGAAGAAGGGGGACTCATCCCTAAGGTACTaGTCAAATTGCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: AAGSSVFIEDRVWEKKGDSSLRY*SNCSSM
Trigger: CATCGAGGAGCAATTTGAGCAGTACCTTAGGGATGA...GTCCCCCTTCTTCTCCCAGACTCTGTCTTCAATAAAAACTGAGCTTCCCGCGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR GCA 90 bp GAAGCTCAGTTTTTATTGAAGACAGAGTCTGGGAGAAGAAGGGGGACTCCGGAATGCTGCATTTGGGCCTaGATCTTCTCCAGCATCTCT +
Preference number: 4 (lower is better)
Translates to: EAQFLLKTESGRRRGTPECCIWA*IFSSIS
Trigger: AGAGATGCTGGAGAAGATGCAGGCCCAAATGCAGCA...TTCCGGAGTCCCCCTTCTTCTCCCAGACTCTGTCTTCAATAAAAACTGAGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR CCA 90 bp CAGTTTTTATTGAAGACAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTATTGAAGACAGAGTCTaGGAGAAGAAGGGGGACTCC +
Preference number: 4 (lower is better)
Translates to: QFLLKTESGRRRGTPEDSIEDRV*EKKGDS
Trigger: GGAGTCCCCCTTCTTCTCCCAGACTCTGTCTTCAAT...ACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTCTGTCTTCAATAAAAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR GCA 90 bp ATGATCCCACGACTGCAAAAGGGATGCTTTCCTTCATCTCTGCATCCTGCCTCTTCATCCCTAAGGTACTaGTCAAATTGCTCCTCGATG +
Preference number: 4 (lower is better)
Translates to: MIPRLQKGCFPSSLHPASSSLRY*SNCSSM
Trigger: CATCGAGGAGCAATTTGAGCAGTACCTTAGGGATGA...AGAGGCAGGATGCAGAGATGAAGGAAAGCATCCCTTTTGCAGTCGTGGGATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR GCA 90 bp GAAGCTCAGTTTTTATTGAAGACAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGCTTTCCTTCATCTCTaGATCCTGCCTCTTGAAGTC +
Preference number: 4 (lower is better)
Translates to: EAQFLLKTESGRRRGTPEAFLHL*ILPLEV
Trigger: GACTTCAAGAGGCAGGATGCAGAGATGAAGGAAAGC...TTCCGGAGTCCCCCTTCTTCTCCCAGACTCTGTCTTCAATAAAAACTGAGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS TCA 90 bp CGGCAGAGGGCAGCGGCAGGGCGCCGCGGGCCACACATGGCTGCGTaGCCGCGGGATGCTGTCTGTCCCCTTGCTCAGGGCGGCGTGCCG +
Preference number: 5 (lower is better)
Translates to: RQRAAAGRRGPHMAA*PRDAVCPLAQGGVP
Trigger: CGGCACGCCGCCCTGAGCAAGGGGACAGACAGCATCCCGCGGTCACGCAGCCATGTGTGGCCCGCGGCGCCCTGCCGCTGCCCTCTGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570039.1
CDS GCA 90 bp AGCGGCAGGGCGCCGCGGGCCACACATGGCTGCGTGACCGCGGGATaGTGTCTGTCCCCTTGCTCAGGGCGGCGTGCCGGCGATGGAGCG +
Preference number: 5 (lower is better)
Translates to: SGRAPRATHGCVTAG*CLSPCSGRRAGDGA
Trigger: CGCTCCATCGCCGGCACGCCGCCCTGAGCAAGGGGACAGACAGCATCCCGCGGTCACGCAGCCATGTGTGGCCCGCGGCGCCCTGCCGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570039.1
CDS CCA 90 bp CCAGACCAGCCTGGGCAACAGAGGGACGTGCCCCTCTACCATCTCTaGGACCCGACGCCGCCCGGTGCCCGCGCTGGCCGGCAGAGGGCA +
Preference number: 5 (lower is better)
Translates to: PDQPGQQRDVPLYHL*DPTPPGARAGRQRA
Trigger: TGCCCTCTGCCGGCCAGCGCGGGCACCGGGCGGCGTCGGGTCCCAGAGATGGTAGAGGGGCACGTCCCTCTGTTGCCCAGGCTGGTCTGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570039.1
CDS GCA 90 bp GCCTCGGCCGTGCGCCGCCACGGACAGGTAACGGCCGGTGGGGACTaGGATGCTTGGCTGTGGCCGGCCGAGATCCTGGAAGATCGGACG +
Preference number: 5 (lower is better)
Translates to: ASAVRRHGQVTAGGD*DAWLWPAEILEDRT
Trigger: CGTCCGATCTTCCAGGATCTCGGCCGGCCACAGCCAAGCATCGCAGTCCCCACCGGCCGTTACCTGTCCGTGGCGGCGCACGGCCGAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570039.1
CDS GCA 90 bp CGGGCCACACATGGCTGCGTGACCGCGGGATGCTGTCTGTCCCCTTaGTCAGGGCGGCGTGCCGGCGATGGAGCGCGCGGTAGAGCCTTG +
Preference number: 5 (lower is better)
Translates to: RATHGCVTAGCCLSP*SGRRAGDGARGRAL
Trigger: CAAGGCTCTACCGCGCGCTCCATCGCCGGCACGCCGCCCTGAGCAAGGGGACAGACAGCATCCCGCGGTCACGCAGCCATGTGTGGCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570039.1
CDS CCA 90 bp GGTGAGGGCCTCGGCCGTGCGCCGCCACGGACAGGTAACGGCCGGTaGGGACTGCGATGCTTGGCTGTGGCCGGCCGAGATCCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: GEGLGRAPPRTGNGR*GLRCLAVAGRDPGR
Trigger: TCTTCCAGGATCTCGGCCGGCCACAGCCAAGCATCGCAGTCCCCACCGGCCGTTACCTGTCCGTGGCGGCGCACGGCCGAGGCCCTCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570039.1
CDS CCA 90 bp CTTGCTCAGGGCGGCGTGCCGGCGATGGAGCGCGCGGTAGAGCCTTaGGGCCCAGATCTCCACCGCCCGGAGGAGAGGGAGCCACAGAGA +
Preference number: 5 (lower is better)
Translates to: LAQGGVPAMERAVEP*GPDLHRPEEREPQR
Trigger: TCTCTGTGGCTCCCTCTCCTCCGGGCGGTGGAGATCTGGGCCCCAAGGCTCTACCGCGCGCTCCATCGCCGGCACGCCGCCCTGAGCAAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570039.1
CDS-3UTR CAA 90 bp GGCGGGACCAGCGCCGGGGCGGGGCTACGGACTCAGGCTGGGAGAACCTCCCCCCCCTTCTTGACAGACTaGCGGTGCAGCTGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: GGTSAGAGLRTQAGRTSPPFLTD*RCSWLG
Trigger: CCCCAACCAGCTGCACCGCAAGTCTGTCAAGAAGGG...GGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCCCCGCCCCGGCGCTGGTCCCGCC
71% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS GCA 90 bp GGCCGTGCGCCGCCACGGACAGGTAACGGCCGGTGGGGACTGCGATaGTTGGCTGTGGCCGGCCGAGATCCTGGAAGATCGGACGTGAGC +
Preference number: 5 (lower is better)
Translates to: GRAPPRTGNGRWGLR*LAVAGRDPGRSDVS
Trigger: GCTCACGTCCGATCTTCCAGGATCTCGGCCGGCCACAGCCAAGCATCGCAGTCCCCACCGGCCGTTACCTGTCCGTGGCGGCGCACGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570039.1
CDS-3UTR CAA 90 bp AGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCGCGGAGGTCCCCTGGCTCTGCTGCATTaGGGCCTGCATCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: RLGEPPPSPREGGTRGGPLALLH*GLHLLQ
Trigger: CTGGAGAAGATGCAGGCCCAAATGCAGCAGAGCCAG...GGGACCTCCGCGGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CAA 90 bp GGCAGTGTGGGGCGCGGGGATTGGACAAGAGGCCGACTGAAGGCGGAGCCGAGGTTGCGGTGCAGCTGGTaGGGGAGGGCAGCAAAACCC +
Preference number: 5 (lower is better)
Translates to: GSVGRGDWTRGRLKAEPRLRCSW*GRAAKP
Trigger: GGGTTTTGCTGCCCTCCCCAACCAGCTGCACCGCAA...CCTCGGCTCCGCCTTCAGTCGGCCTCTTGTCCAATCCCCGCGCCCCACACTGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CAA 90 bp TGGCGGGAAAGCTTACTGCGGCTGGCTCGATCGCGAGCCCCAGGCCGGGCCAGGCCCTTCTTGACAGACTaGCGGTGCAGCTGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: WRESLLRLARSRAPGRARPFLTD*RCSWLG
Trigger: CCCCAACCAGCTGCACCGCAAGTCTGTCAAGAAGGG...CCTGGCCCGGCCTGGGGCTCGCGATCGAGCCAGCCGCAGTAAGCTTTCCCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR CAA 90 bp TACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCGCCTTCTCCAGCATCTCTaGCATGCGGCGCAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: YGLRLGEPPPSPREGGTRLLQHL*HAAQLF
Trigger: GAAGAGCTGCGCCGCATGCAAGAGATGCTGGAGAAG...GCGGGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CAA 90 bp GGCTACGGACTCAGGCTGGGAGAACCTCCCCCTAGCCCGCGCGAGGGCGGCACCCTTCTCCAGCATCTCTaGCATGCGGCGCAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: GYGLRLGEPPPSPREGGTLLQHL*HAAQLF
Trigger: GAAGAGCTGCGCCGCATGCAAGAGATGCTGGAGAAG...GGTGCCGCCCTCGCGCGGGCTAGGGGGAGGTTCTCCCAGCCTGAGTCCGTAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CAA 90 bp CGGGGATTGGACAAGAGGCCGACTGAAGGCGGAGCCGAGGTAAGGCCGGGCGGGTGTGGGGCGCGGGGATaGGACAAGAGGCCGACTGAA +
Preference number: 5 (lower is better)
Translates to: RGLDKRPTEGGAEVRPGGCGARG*DKRPTE
Trigger: TTCAGTCGGCCTCTTGTCCAATCCCCGCGCCCCACA...CCCGCCCGGCCTTACCTCGGCTCCGCCTTCAGTCGGCCTCTTGTCCAATCCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS GCA 90 bp TCTCGTGTACTGCCCGGAGGAAGGCCACATCTAGGGGCCGGAGCCTaGACCCAGGGATTGGTCATTGCCCAGCCTCAGGGGGCAGAGACC +
Preference number: 5 (lower is better)
Translates to: SRVLPGGRPHLGAGA*TQGLVIAQPQGAET
Trigger: GGTCTCTGCCCCCTGAGGCTGGGCAATGACCAATCCCTGGGTGCAGGCTCCGGCCCCTAGATGTGGCCTTCCTCCGGGCAGTACACGAGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000563957.6
ENST00000573615.5
CDS-3UTR CAA 90 bp TCTGTAGGCAGCGGGCCCGGTAGCCCTCGTAGAGCAGATCGTGCGTCACCTCTTTTGCGGTGCAGCTGGTaGGGGAGGGCAGCAAAACCC +
Preference number: 5 (lower is better)
Translates to: SVGSGPGSPRRADRASPLLRCSW*GRAAKP
Trigger: GGGTTTTGCTGCCCTCCCCAACCAGCTGCACCGCAA...AAGAGGTGACGCACGATCTGCTCTACGAGGGCTACCGGGCCCGCTGCCTACAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR CAA 90 bp CGCAGCTCTTCGTCTTTCTCGCGGATCAGCTTCTCGGTGTCCGCCAGAGGCAGCTGTGGGGCGCGGGGATaGGACAAGAGGCCGACTGAA +
Preference number: 5 (lower is better)
Translates to: RSSSSFSRISFSVSARGSCGARG*DKRPTE
Trigger: TTCAGTCGGCCTCTTGTCCAATCCCCGCGCCCCACA...GCTGCCTCTGGCGGACACCGAGAAGCTGATCCGCGAGAAAGACGAAGAGCTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS CCA 90 bp TCACTTTCACACCCCCTTCCTCAATCTCTACGCCCCGGCGCTCAATaGCCAGGGTCTGTGTCAAGCGAGCACTGGCCTCTGGCACCTGGC +
Preference number: 5 (lower is better)
Translates to: SLSHPLPQSLRPGAQ*PGSVSSEHWPLAPG
Trigger: GCCAGGTGCCAGAGGCCAGTGCTCGCTTGACACAGACCCTGGCCATTGAGCGCCGGGGCGTAGAGATTGAGGAAGGGGGTGTGAAAGTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000321367.7
ENST00000563743.1
ENST00000563957.6
ENST00000566517.5
ENST00000568577.5
ENST00000573615.5
ENST00000652617.1
CDS-3UTR CAA 90 bp GGGGCGCGGGGATTGGACAAGAGGCCGACTGAAGGCGGAGCCGAGGTAAGGCCGATCAGAGCATCCGCTTaGCCAATGACTGGGATGATG +
Preference number: 5 (lower is better)
Translates to: GARGLDKRPTEGGAEVRPIRASA*PMTGMM
Trigger: CATCATCCCAGTCATTGGCAAAGCGGATGCTCTGAT...CGGCCTTACCTCGGCTCCGCCTTCAGTCGGCCTCTTGTCCAATCCCCGCGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CAA 90 bp ACTGAAGGCGGAGCCGAGGTAAGGCCGGGCGGGGCGTGGCCTCAGAGGGCGTCTTCTGCATCCTGCCTCTaGAAGTCTTCATCTTCATCA +
Preference number: 5 (lower is better)
Translates to: TEGGAEVRPGGAWPQRASSASCL*KSSSSS
Trigger: TGATGAAGATGAAGACTTCAAGAGGCAGGATGCAGA...AGACGCCCTCTGAGGCCACGCCCCGCCCGGCCTTACCTCGGCTCCGCCTTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR CAA 90 bp ACTGAAGGCGGAGCCGAGGTAAGGCCGGGCGGGGCGTGGCCTCAGAGGGCGTCTAAGGTACTGCTCAAATaGCTCCTCGATGAATTTCAC +
Preference number: 5 (lower is better)
Translates to: TEGGAEVRPGGAWPQRASKVLLK*LLDEFH
Trigger: GTGAAATTCATCGAGGAGCAATTTGAGCAGTACCTT...AGACGCCCTCTGAGGCCACGCCCCGCCCGGCCTTACCTCGGCTCCGCCTTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR CAA 90 bp CGGGGATTGGACAAGAGGCCGACTGAAGGCGGAGCCGAGGTAAGGCCGGGCGGGTCTGCATCCTGCCTCTaGAAGTCTTCATCTTCATCA +
Preference number: 5 (lower is better)
Translates to: RGLDKRPTEGGAEVRPGGSASCL*KSSSSS
Trigger: TGATGAAGATGAAGACTTCAAGAGGCAGGATGCAGA...CCCGCCCGGCCTTACCTCGGCTCCGCCTTCAGTCGGCCTCTTGTCCAATCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CAA 90 bp GGGGCGCGGGGATTGGACAAGAGGCCGACTGAAGGCGGAGCCGAGGTAAGGCCGAAGGTACTGCTCAAATaGCTCCTCGATGAATTTCAC +
Preference number: 5 (lower is better)
Translates to: GARGLDKRPTEGGAEVRPKVLLK*LLDEFH
Trigger: GTGAAATTCATCGAGGAGCAATTTGAGCAGTACCTT...CGGCCTTACCTCGGCTCCGCCTTCAGTCGGCCTCTTGTCCAATCCCCGCGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CAA 90 bp GGACTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAATGACTGGGATGATGTaGACTTTCTCGTGTACTGCC +
Preference number: 5 (lower is better)
Translates to: GLRKTVMRSEIVQAPGREMTGMM*TFSCTA
Trigger: GGCAGTACACGAGAAAGTCAACATCATCCCAGTCAT...TTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CAA 90 bp ACTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCCCGGGCCGGGAAGTATCAGAGCATCCGCTTaGCCAATGACTGGGATGATG +
Preference number: 5 (lower is better)
Translates to: TPEDSDAVGDCAGPGPGSIRASA*PMTGMM
Trigger: CATCATCCCAGTCATTGGCAAAGCGGATGCTCTGAT...ACTTCCCGGCCCGGGGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS-3UTR CAA 90 bp GAGGCAGCATGGGCAGCGGGATCTCTGTGGCGCTCTGGCGGGAAAGCTTACTGCATGACTGGGATGATGTaGACTTTCTCGTGTACTGCC +
Preference number: 5 (lower is better)
Translates to: EAAWAAGSLWRSGGKAYCMTGMM*TFSCTA
Trigger: GGCAGTACACGAGAAAGTCAACATCATCCCAGTCAT...GCAGTAAGCTTTCCCGCCAGAGCGCCACAGAGATCCCGCTGCCCATGCTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR CAA 90 bp CAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGATTCTGGCTCTGCTGCATTaGGGCCTGCATCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: QSLGEEGGLRKTVMRSEILALLH*GLHLLQ
Trigger: CTGGAGAAGATGCAGGCCCAAATGCAGCAGAGCCAG...AATCTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS CCA 90 bp GGTCAAAGGTCAGAGGTCATCACTCACACCTTCTGCTTGAGGGCCTaGGTTTCCTGGGGCATCAGAGCATCCGCTTTGCCAATGACTGGG +
Preference number: 5 (lower is better)
Translates to: GQRSEVITHTFCLRA*VSWGIRASALPMTG
Trigger: CCCAGTCATTGGCAAAGCGGATGCTCTGATGCCCCAGGAAACCCAGGCCCTCAAGCAGAAGGTGTGAGTGATGACCTCTGACCTTTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563957.6
CDS CCA 90 bp AGCCCGGGGGCTGCATATGTAGCCTATTTTGAGCCTTCAGAGACATaGCTATGCTGGCGGCTTACCACCCGCCTTCCTCAGAAGCTTCTC +
Preference number: 5 (lower is better)
Translates to: SPGAAYVAYFEPSET*LCWRLTTRLPQKLL
Trigger: GAGAAGCTTCTGAGGAAGGCGGGTGGTAAGCCGCCAGCATAGCCATGTCTCTGAAGGCTCAAAATAGGCTACATATGCAGCCCCCGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563957.6
CDS-3UTR CAA 90 bp GCCAATGACTGGGATGATGTTGACTTTCTCGTGTACTGCCCGGAGGAAGGCCACCTGGCTCTGCTGCATTaGGGCCTGCATCTTCTCCAG +
Preference number: 5 (lower is better)
Translates to: ANDWDDVDFLVYCPEEGHLALLH*GLHLLQ
Trigger: CTGGAGAAGATGCAGGCCCAAATGCAGCAGAGCCAG...GTGGCCTTCCTCCGGGCAGTACACGAGAAAGTCAACATCATCCCAGTCATTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000572252.6
CDS-3UTR CAA 90 bp GAAGCTCAGTTTTTATTGAAGACAGAGTCTGGGAGAAGAAGGGGGACTCCGGAATTGCGGTGCAGCTGGTaGGGGAGGGCAGCAAAACCC +
Preference number: 5 (lower is better)
Translates to: EAQFLLKTESGRRRGTPELRCSW*GRAAKP
Trigger: GGGTTTTGCTGCCCTCCCCAACCAGCTGCACCGCAA...TTCCGGAGTCCCCCTTCTTCTCCCAGACTCTGTCTTCAATAAAAACTGAGCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR CAA 90 bp GGAGAAGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGATTGTGCAGGCCTCTGCATCCTGCCTCTaGAAGTCTTCATCTTCATCA +
Preference number: 5 (lower is better)
Translates to: GEEGGLRKTVMRSEIVQASASCL*KSSSSS
Trigger: TGATGAAGATGAAGACTTCAAGAGGCAGGATGCAGA...GGCCTGCACAATCTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS GCA 90 bp GGGGCTGCATATGTAGCCTATTTTGAGCCTTCAGAGACATGGCTATaGTGGCGGCTTACCACCCGCCTTCCTCAGAAGCTTCTCCTACAA +
Preference number: 5 (lower is better)
Translates to: GAAYVAYFEPSETWL*WRLTTRLPQKLLLQ
Trigger: TTGTAGGAGAAGCTTCTGAGGAAGGCGGGTGGTAAGCCGCCAGCATAGCCATGTCTCTGAAGGCTCAAAATAGGCTACATATGCAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563957.6
CDS GCA 90 bp CTCTTTGTCTCTGCCCGTTTCGCTCACTATCGTCTTTTGTTCCTCTaGTTCTGGGCCTGTTACTCTCCAGGCTCCCAGCCTCTTACTGCT +
Preference number: 5 (lower is better)
Translates to: LFVSARFAHYRLLFL*FWACYSPGSQPLTA
Trigger: AGCAGTAAGAGGCTGGGAGCCTGGAGAGTAACAGGCCCAGAAGCAGAGGAACAAAAGACGATAGTGAGCGAAACGGGCAGAGACAAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567783.1
CDS TCA 90 bp TCACACATCTGGATTCCAAGTCCCACTGTAGCTCCATCATCGTGGTaGGACATGGGGTATGTGCAGAGAGGAAGGAAGTGGCTCCCTTTG +
Preference number: 5 (lower is better)
Translates to: SHIWIPSPTVAPSSW*DMGYVQRGRKWLPL
Trigger: CAAAGGGAGCCACTTCCTTCCTCTCTGCACATACCCCATGTCTCACCACGATGATGGAGCTACAGTGGGACTTGGAATCCAGATGTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000570039.1
ENST00000652617.1
CDS TCA 90 bp TCTCCAGGCTCCCAGCCTCTTACTGCTCCTCGGACTCTGCGTCAATaGCTTTATCTCTTATCCGTTTCTACGTCTCTGTCTCTAGCGGCT +
Preference number: 5 (lower is better)
Translates to: SPGSQPLTAPRTLRQ*LYLLSVSTSLSLAA
Trigger: AGCCGCTAGAGACAGAGACGTAGAAACGGATAAGAGATAAAGTCATTGACGCAGAGTCCGAGGAGCAGTAAGAGGCTGGGAGCCTGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567783.1
CDS-3UTR CAA 90 bp CAGTTTTTATTGAAGACAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTCTTCTCCAGCATCTCTaGCATGCGGCGCAGCTCTTC +
Preference number: 5 (lower is better)
Translates to: QFLLKTESGRRRGTPEDSLLQHL*HAAQLF
Trigger: GAAGAGCTGCGCCGCATGCAAGAGATGCTGGAGAAG...ACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTCTGTCTTCAATAAAAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS TCA 90 bp GGCTTACCACCCGCCTTCCTCAGAAGCTTCTCCTACAATCTAGCCTaGTGCACCATGCTCCAGAAAGGCCACTTCAAGATCAAAGAAGTC +
Preference number: 5 (lower is better)
Translates to: GLPPAFLRSFSYNLA*CTMLQKGHFKIKEV
Trigger: GACTTCTTTGATCTTGAAGTGGCCTTTCTGGAGCATGGTGCATCAGGCTAGATTGTAGGAGAAGCTTCTGAGGAAGGCGGGTGGTAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563957.6
CDS GCA 90 bp CCTGTTACTCTCCAGGCTCCCAGCCTCTTACTGCTCCTCGGACTCTaGGTCAATGACTTTATCTCTTATCCGTTTCTACGTCTCTGTCTC +
Preference number: 5 (lower is better)
Translates to: PVTLQAPSLLLLLGL*VNDFISYPFLRLCL
Trigger: GAGACAGAGACGTAGAAACGGATAAGAGATAAAGTCATTGACGCAGAGTCCGAGGAGCAGTAAGAGGCTGGGAGCCTGGAGAGTAACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567783.1
CDS CCA 90 bp GCTGCATATGTAGCCTATTTTGAGCCTTCAGAGACATGGCTATGCTaGCGGCTTACCACCCGCCTTCCTCAGAAGCTTCTCCTACAATCT +
Preference number: 5 (lower is better)
Translates to: AAYVAYFEPSETWLC*RLTTRLPQKLLLQS
Trigger: AGATTGTAGGAGAAGCTTCTGAGGAAGGCGGGTGGTAAGCCGCCAGCATAGCCATGTCTCTGAAGGCTCAAAATAGGCTACATATGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563957.6
CDS-3UTR CAA 90 bp GAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTGATGCGGTCGGAGATTGTAAGGTACTGCTCAAATaGCTCCTCGATGAATTTCAC +
Preference number: 5 (lower is better)
Translates to: ESGRRRGTPEDSDAVGDCKVLLK*LLDEFH
Trigger: GTGAAATTCATCGAGGAGCAATTTGAGCAGTACCTT...ACAATCTCCGACCGCATCACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000572252.6
ENST00000652617.1
CDS CCA 90 bp TATCTCTTATCCGTTTCTACGTCTCTGTCTCTAGCGGCTAATCTTTaGCTCCCCTTATTTTTGGTCAGCCGCTGTCCCTCGGTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: YLLSVSTSLSLAANL*LPLFLVSRCPSVSL
Trigger: GAGAGAGACCGAGGGACAGCGGCTGACCAAAAATAAGGGGAGCCAAAGATTAGCCGCTAGAGACAGAGACGTAGAAACGGATAAGAGATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567783.1
CDS-3UTR CAA 90 bp GAAGCTCAGTTTTTATTGAAGACAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAATCAGAGCATCCGCTTaGCCAATGACTGGGATGATG +
Preference number: 5 (lower is better)
Translates to: EAQFLLKTESGRRRGTPEIRASA*PMTGMM
Trigger: CATCATCCCAGTCATTGGCAAAGCGGATGCTCTGAT...TTCCGGAGTCCCCCTTCTTCTCCCAGACTCTGTCTTCAATAAAAACTGAGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS-3UTR CAA 90 bp CAGTTTTTATTGAAGACAGAGTCTGGGAGAAGAAGGGGGACTCCGGAAGACAGTATGACTGGGATGATGTaGACTTTCTCGTGTACTGCC +
Preference number: 5 (lower is better)
Translates to: QFLLKTESGRRRGTPEDSMTGMM*TFSCTA
Trigger: GGCAGTACACGAGAAAGTCAACATCATCCCAGTCAT...ACTGTCTTCCGGAGTCCCCCTTCTTCTCCCAGACTCTGTCTTCAATAAAAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000321367.7
ENST00000652617.1
CDS CCA 90 bp AATGACAGACATTTCATGACCAGAGACAGTGAGACACAGAGATACTaGGTGGTCAGAGACAGAGAGAAAGACATGAAAGACAGAGATGGG +
Preference number: 5 (lower is better)
Translates to: NDRHFMTRDSETQRY*VVRDREKDMKDRDG
Trigger: CCCATCTCTGTCTTTCATGTCTTTCTCTCTGTCTCTGACCACCCAGTATCTCTGTGTCTCACTGTCTCTGGTCATGAAATGTCTGTCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563957.6
CDS CCA 90 bp ATACTGGGTGGTCAGAGACAGAGAGAAAGACATGAAAGACAGAGATaGGGAGAGATGGACATACAGGAAGACAAAAACAAAATCTCAGAG +
Preference number: 5 (lower is better)
Translates to: ILGGQRQRERHERQR*GEMDIQEDKNKISE
Trigger: CTCTGAGATTTTGTTTTTGTCTTCCTGTATGTCCATCTCTCCCCATCTCTGTCTTTCATGTCTTTCTCTCTGTCTCTGACCACCCAGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563957.6
CDS GCA 72 bp GCGCCGCGGGCCACACATGGCTGCGTGACCGCGGGATaGTGTCTGTCCCCTTGCTCAGGGCGGCGTGCCGGC +
Preference number: 6 (lower is better)
Translates to: APRATHGCVTAG*CLSPCSGRRAG
Trigger: GCCGGCACGCCGCCCTGAGCAAGGGGACAGACAGCATCCCGCGGTCACGCAGCCATGTGTGGCCCGCGGCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570039.1
CDS CCA 72 bp GGCGGCGTGCCGGCGATGGAGCGCGCGGTAGAGCCTTaGGGCCCAGATCTCCACCGCCCGGAGGAGAGGGAG +
Preference number: 6 (lower is better)
Translates to: GGVPAMERAVEP*GPDLHRPEERE
Trigger: CTCCCTCTCCTCCGGGCGGTGGAGATCTGGGCCCCAAGGCTCTACCGCGCGCTCCATCGCCGGCACGCCGCC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570039.1
CDS CCA 72 bp CCTGGGCAACAGAGGGACGTGCCCCTCTACCATCTCTaGGACCCGACGCCGCCCGGTGCCCGCGCTGGCCGG +
Preference number: 6 (lower is better)
Translates to: PGQQRDVPLYHL*DPTPPGARAGR
Trigger: CCGGCCAGCGCGGGCACCGGGCGGCGTCGGGTCCCAGAGATGGTAGAGGGGCACGTCCCTCTGTTGCCCAGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570039.1
CDS CAA 72 bp GGGCGGCGTGCCGGCGATGGAGCGCGCGGTAGAGCCTaGGGGCCCAGATCTCCACCGCCCGGAGGAGAGGGA +
Preference number: 6 (lower is better)
Translates to: GRRAGDGARGRA*GPRSPPPGGEG
Trigger: TCCCTCTCCTCCGGGCGGTGGAGATCTGGGCCCCAAGGCTCTACCGCGCGCTCCATCGCCGGCACGCCGCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570039.1
CDS TCA 72 bp GCAGCGGCAGGGCGCCGCGGGCCACACATGGCTGCGTaGCCGCGGGATGCTGTCTGTCCCCTTGCTCAGGGC +
Preference number: 6 (lower is better)
Translates to: AAAGRRGPHMAA*PRDAVCPLAQG
Trigger: GCCCTGAGCAAGGGGACAGACAGCATCCCGCGGTCACGCAGCCATGTGTGGCCCGCGGCGCCCTGCCGCTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570039.1
CDS CCA 72 bp GGCAGAGGGCAGCGGCAGGGCGCCGCGGGCCACACATaGCTGCGTGACCGCGGGATGCTGTCTGTCCCCTTG +
Preference number: 6 (lower is better)
Translates to: GRGQRQGAAGHT*LRDRGMLSVPL
Trigger: CAAGGGGACAGACAGCATCCCGCGGTCACGCAGCCATGTGTGGCCCGCGGCGCCCTGCCGCTGCCCTCTGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570039.1
CDS CAA 90 bp CCTTGCTCAGGGCGGCGTGCCGGCGATGGAGCGCGCGGTAGAGCCTaGGGGCCCAGATCTCCACCGCCCGGAGGAGAGGGAGCCACAGAG +
Preference number: 6 (lower is better)
Translates to: PCSGRRAGDGARGRA*GPRSPPPGGEGATE
Trigger: CTCTGTGGCTCCCTCTCCTCCGGGCGGTGGAGATCTGGGCCCCAAGGCTCTACCGCGCGCTCCATCGCCGGCACGCCGCCCTGAGCAAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570039.1
CDS GCA 72 bp CATGGCTGCGTGACCGCGGGATGCTGTCTGTCCCCTTaGTCAGGGCGGCGTGCCGGCGATGGAGCGCGCGGT +
Preference number: 6 (lower is better)
Translates to: HGCVTAGCCLSP*SGRRAGDGARG
Trigger: ACCGCGCGCTCCATCGCCGGCACGCCGCCCTGAGCAAGGGGACAGACAGCATCCCGCGGTCACGCAGCCATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570039.1
CDS CCA 72 bp CTCGGCCGTGCGCCGCCACGGACAGGTAACGGCCGGTaGGGACTGCGATGCTTGGCTGTGGCCGGCCGAGAT +
Preference number: 6 (lower is better)
Translates to: LGRAPPRTGNGR*GLRCLAVAGRD
Trigger: ATCTCGGCCGGCCACAGCCAAGCATCGCAGTCCCCACCGGCCGTTACCTGTCCGTGGCGGCGCACGGCCGAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570039.1
CDS CAA 72 bp ACATGGCTGCGTGACCGCGGGATGCTGTCTGTCCCCTaGCTCAGGGCGGCGTGCCGGCGATGGAGCGCGCGG +
Preference number: 6 (lower is better)
Translates to: TWLRDRGMLSVP*LRAACRRWSAR
Trigger: CCGCGCGCTCCATCGCCGGCACGCCGCCCTGAGCAAGGGGACAGACAGCATCCCGCGGTCACGCAGCCATGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570039.1
CDS CAA 90 bp CGTGCGCCGCCACGGACAGGTAACGGCCGGTGGGGACTGCGATGCTaGGCTGTGGCCGGCCGAGATCCTGGAAGATCGGACGTGAGCTGT +
Preference number: 6 (lower is better)
Translates to: RAPPRTGNGRWGLRC*AVAGRDPGRSDVSC
Trigger: ACAGCTCACGTCCGATCTTCCAGGATCTCGGCCGGCCACAGCCAAGCATCGCAGTCCCCACCGGCCGTTACCTGTCCGTGGCGGCGCACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570039.1
CDS GCA 72 bp CTGCCCGGAGGAAGGCCACATCTAGGGGCCGGAGCCTaGACCCAGGGATTGGTCATTGCCCAGCCTCAGGGG +
Preference number: 6 (lower is better)
Translates to: LPGGRPHLGAGA*TQGLVIAQPQG
Trigger: CCCCTGAGGCTGGGCAATGACCAATCCCTGGGTGCAGGCTCCGGCCCCTAGATGTGGCCTTCCTCCGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563957.6
ENST00000573615.5
CDS GCA 72 bp CCGCCACGGACAGGTAACGGCCGGTGGGGACTGCGATaGTTGGCTGTGGCCGGCCGAGATCCTGGAAGATCG +
Preference number: 6 (lower is better)
Translates to: PPRTGNGRWGLR*LAVAGRDPGRS
Trigger: CGATCTTCCAGGATCTCGGCCGGCCACAGCCAAGCATCGCAGTCCCCACCGGCCGTTACCTGTCCGTGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570039.1
CDS CCA 72 bp CACGGACAGGTAACGGCCGGTGGGGACTGCGATGCTTaGCTGTGGCCGGCCGAGATCCTGGAAGATCGGACG +
Preference number: 6 (lower is better)
Translates to: HGQVTAGGDCDA*LWPAEILEDRT
Trigger: CGTCCGATCTTCCAGGATCTCGGCCGGCCACAGCCAAGCATCGCAGTCCCCACCGGCCGTTACCTGTCCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570039.1
CDS CAA 72 bp CCACGGACAGGTAACGGCCGGTGGGGACTGCGATGCTaGGCTGTGGCCGGCCGAGATCCTGGAAGATCGGAC +
Preference number: 6 (lower is better)
Translates to: PRTGNGRWGLRC*AVAGRDPGRSD
Trigger: GTCCGATCTTCCAGGATCTCGGCCGGCCACAGCCAAGCATCGCAGTCCCCACCGGCCGTTACCTGTCCGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570039.1
CDS CCA 72 bp CACCCCCTTCCTCAATCTCTACGCCCCGGCGCTCAATaGCCAGGGTCTGTGTCAAGCGAGCACTGGCCTCTG +
Preference number: 6 (lower is better)
Translates to: HPLPQSLRPGAQ*PGSVSSEHWPL
Trigger: CAGAGGCCAGTGCTCGCTTGACACAGACCCTGGCCATTGAGCGCCGGGGCGTAGAGATTGAGGAAGGGGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000321367.7
ENST00000563743.1
ENST00000563957.6
ENST00000566517.5
ENST00000568577.5
ENST00000573615.5
ENST00000652617.1
CDS CCA 72 bp GGGACTGCGATGCTTGGCTGTGGCCGGCCGAGATCCTaGAAGATCGGACGTGAGCTGTGCCTCTGGGGAGAT +
Preference number: 6 (lower is better)
Translates to: GTAMLGCGRPRS*KIGRELCLWGD
Trigger: ATCTCCCCAGAGGCACAGCTCACGTCCGATCTTCCAGGATCTCGGCCGGCCACAGCCAAGCATCGCAGTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570039.1
CDS TCA 72 bp CACCGGCCGGTTCCCGCCATCCCTCACCACCTCGCATaGTCCCACGACTGCAAAAGGGATGCTTTCCTGGCA +
Preference number: 6 (lower is better)
Translates to: HRPVPAIPHHLA*SHDCKRDAFLA
Trigger: TGCCAGGAAAGCATCCCTTTTGCAGTCGTGGGATCATGCGAGGTGGTGAGGGATGGCGGGAACCGGCCGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573615.5
CDS TCA 72 bp ACGTACTCCTTGTCCTATGGATGGGGGTGGACAATATaGGGCTGCTGGCAATGGCAGGCAGGGTCCCCAGGA +
Preference number: 6 (lower is better)
Translates to: TYSLSYGWGWTI*GCWQWQAGSPG
Trigger: TCCTGGGGACCCTGCCTGCCATTGCCAGCAGCCTCATATTGTCCACCCCCATCCATAGGACAAGGAGTACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566517.5
CDS CCA 72 bp ATCACTCACACCTTCTGCTTGAGGGCCTGGGTTTCCTaGGGCATCAGAGCATCCGCTTTGCCAATGACTGGG +
Preference number: 6 (lower is better)
Translates to: ITHTFCLRAWVS*GIRASALPMTG
Trigger: CCCAGTCATTGGCAAAGCGGATGCTCTGATGCCCCAGGAAACCCAGGCCCTCAAGCAGAAGGTGTGAGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563957.6
CDS CCA 72 bp TCAGAGGTCATCACTCACACCTTCTGCTTGAGGGCCTaGGTTTCCTGGGGCATCAGAGCATCCGCTTTGCCA +
Preference number: 6 (lower is better)
Translates to: SEVITHTFCLRA*VSWGIRASALP
Trigger: TGGCAAAGCGGATGCTCTGATGCCCCAGGAAACCCAGGCCCTCAAGCAGAAGGTGTGAGTGATGACCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563957.6
CDS CAA 90 bp TTCACATGGGGTCAAAGGTCAGAGGTCATCACTCACACCTTCTGCTaGAGGGCCTGGGTTTCCTGGGGCATCAGAGCATCCGCTTTGCCA +
Preference number: 6 (lower is better)
Translates to: FTWGQRSEVITHTFC*RAWVSWGIRASALP
Trigger: TGGCAAAGCGGATGCTCTGATGCCCCAGGAAACCCAGGCCCTCAAGCAGAAGGTGTGAGTGATGACCTCTGACCTTTGACCCCATGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563957.6
CDS GCA 72 bp TCTGCCCGTTTCGCTCACTATCGTCTTTTGTTCCTCTaGTTCTGGGCCTGTTACTCTCCAGGCTCCCAGCCT +
Preference number: 6 (lower is better)
Translates to: SARFAHYRLLFL*FWACYSPGSQP
Trigger: AGGCTGGGAGCCTGGAGAGTAACAGGCCCAGAAGCAGAGGAACAAAAGACGATAGTGAGCGAAACGGGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567783.1
CDS CCA 72 bp AGAAAGAGAGGCCGAGAGAGATATAAGCAGAAACAGTaGGAAAGGGCTCTGAAGACACGGGGTGGGGGCCAG +
Preference number: 6 (lower is better)
Translates to: RKRGRERYKQKQ*ERALKTRGGGQ
Trigger: CTGGCCCCCACCCCGTGTCTTCAGAGCCCTTTCCCACTGTTTCTGCTTATATCTCTCTCGGCCTCTCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000563957.6
CDS CAA 90 bp TCTACGTCTCTGTCTCTAGCGGCTAATCTTTGGCTCCCCTTATTTTaGGTCAGCCGCTGTCCCTCGGTCTCTCTCTGCCTTTGCGTCCTC +
Preference number: 6 (lower is better)
Translates to: STSLSLAANLWLPLF*VSRCPSVSLCLCVL
Trigger: GAGGACGCAAAGGCAGAGAGAGACCGAGGGACAGCGGCTGACCAAAAATAAGGGGAGCCAAAGATTAGCCGCTAGAGACAGAGACGTAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567783.1
CDS GCA 72 bp CAGAGGGAAGTCACTATGTTCTCATGTCTATGCTCCTaGCCTCAAATAGGCCTCAGCCAGGCATCTAGCCCG +
Preference number: 6 (lower is better)
Translates to: QREVTMFSCLCS*PQIGLSQASSP
Trigger: CGGGCTAGATGCCTGGCTGAGGCCTATTTGAGGGCAGGAGCATAGACATGAGAACATAGTGACTTCCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563957.6
CDS TCA 72 bp TGGATTCCAAGTCCCACTGTAGCTCCATCATCGTGGTaGGACATGGGGTATGTGCAGAGAGGAAGGAAGTGG +
Preference number: 6 (lower is better)
Translates to: WIPSPTVAPSSW*DMGYVQRGRKW
Trigger: CCACTTCCTTCCTCTCTGCACATACCCCATGTCTCACCACGATGATGGAGCTACAGTGGGACTTGGAATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000321367.7
ENST00000570039.1
ENST00000652617.1
CDS TCA 72 bp CCCGCCTTCCTCAGAAGCTTCTCCTACAATCTAGCCTaGTGCACCATGCTCCAGAAAGGCCACTTCAAGATC +
Preference number: 6 (lower is better)
Translates to: PAFLRSFSYNLA*CTMLQKGHFKI
Trigger: GATCTTGAAGTGGCCTTTCTGGAGCATGGTGCATCAGGCTAGATTGTAGGAGAAGCTTCTGAGGAAGGCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563957.6
CDS CCA 72 bp TCCGTTTCTACGTCTCTGTCTCTAGCGGCTAATCTTTaGCTCCCCTTATTTTTGGTCAGCCGCTGTCCCTCG +
Preference number: 6 (lower is better)
Translates to: SVSTSLSLAANL*LPLFLVSRCPS
Trigger: CGAGGGACAGCGGCTGACCAAAAATAAGGGGAGCCAAAGATTAGCCGCTAGAGACAGAGACGTAGAAACGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567783.1
CDS GCA 72 bp TATGTAGCCTATTTTGAGCCTTCAGAGACATGGCTATaGTGGCGGCTTACCACCCGCCTTCCTCAGAAGCTT +
Preference number: 6 (lower is better)
Translates to: YVAYFEPSETWL*WRLTTRLPQKL
Trigger: AAGCTTCTGAGGAAGGCGGGTGGTAAGCCGCCAGCATAGCCATGTCTCTGAAGGCTCAAAATAGGCTACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563957.6
CDS GCA 72 bp CTCCAGGCTCCCAGCCTCTTACTGCTCCTCGGACTCTaGGTCAATGACTTTATCTCTTATCCGTTTCTACGT +
Preference number: 6 (lower is better)
Translates to: LQAPSLLLLLGL*VNDFISYPFLR
Trigger: ACGTAGAAACGGATAAGAGATAAAGTCATTGACGCAGAGTCCGAGGAGCAGTAAGAGGCTGGGAGCCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567783.1
CDS TCA 72 bp TCCCAGCCTCTTACTGCTCCTCGGACTCTGCGTCAATaGCTTTATCTCTTATCCGTTTCTACGTCTCTGTCT +
Preference number: 6 (lower is better)
Translates to: SQPLTAPRTLRQ*LYLLSVSTSLS
Trigger: AGACAGAGACGTAGAAACGGATAAGAGATAAAGTCATTGACGCAGAGTCCGAGGAGCAGTAAGAGGCTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567783.1
CDS TCA 72 bp AGAGATACTGGGTGGTCAGAGACAGAGAGAAAGACATaGAAGACAGAGATGGGGAGAGATGGACATACAGGA +
Preference number: 6 (lower is better)
Translates to: RDTGWSETERKT*KTEMGRDGHTG
Trigger: TCCTGTATGTCCATCTCTCCCCATCTCTGTCTTTCATGTCTTTCTCTCTGTCTCTGACCACCCAGTATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563957.6
CDS CAA 90 bp AGAAAGGCCACTTCAAGATCAAAGAAGTCTAAGCTGAAATCAGGTTaGGCTTCACATGGGGTCAAAGGTCAGAGGTCATCACTCACACCT +
Preference number: 6 (lower is better)
Translates to: RKATSRSKKSKLKSG*ASHGVKGQRSSLTP
Trigger: AGGTGTGAGTGATGACCTCTGACCTTTGACCCCATGTGAAGCCAAACCTGATTTCAGCTTAGACTTCTTTGATCTTGAAGTGGCCTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563957.6
CDS TCA 72 bp CCAGAAAGGCCACTTCAAGATCAAAGAAGTCTAAGCTaGAATCAGGTTTGGCTTCACATGGGGTCAAAGGTC +
Preference number: 6 (lower is better)
Translates to: PERPLQDQRSLS*NQVWLHMGSKV
Trigger: GACCTTTGACCCCATGTGAAGCCAAACCTGATTTCAGCTTAGACTTCTTTGATCTTGAAGTGGCCTTTCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563957.6