RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEC24D (Homo sapiens)

Ensembl gene IDs: ENSG00000150961

Ensembl transcript IDs: ENST00000280551.11, ENST00000419654.6, ENST00000502526.1, ENST00000502830.1, ENST00000503683.1, ENST00000505134.5, ENST00000505280.1, ENST00000506622.5, ENST00000509818.5, ENST00000511481.5, ENST00000511715.1, ENST00000514418.1, ENST00000514561.5

Found 673 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGCTGCGGAGGATATCCAGCACCCAAGGTCTGGCCTGGAAGAGGTaGGGGCTGGTACTGGGCATTTGGAGGAGGAGGCCCAGAGAGCCC +
Preference number: 1 (lower is better)
Translates to: LLRRISSTQGLAWKR*GLVLGIWRRRPREP
Trigger: GGGCTCTCTGGGCCTCCTCCTCCAAATGCCCAGTACCAGCCCCCACCTCTTCCAGGCCAGACCTTGGGTGCTGGATATCCTCCGCAGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR CCA 90 bp AGAGTTGGCCTGCTGCGGAGGATATCCAGCACCCAAGGTCTGGCCTaGAAGAGGTGGGGGCTGGTACTGGGCATTTGGAGGAGGAGGCCC +
Preference number: 1 (lower is better)
Translates to: RVGLLRRISSTQGLA*KRWGLVLGIWRRRP
Trigger: GGGCCTCCTCCTCCAAATGCCCAGTACCAGCCCCCACCTCTTCCAGGCCAGACCTTGGGTGCTGGATATCCTCCGCAGCAGGCCAACTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR CCA 90 bp CTGTGGCGGACCAGCCATCTGTGCAGGACCTCCAGGGAAGCCTCCTaGGTAAGACAGTTGTGCGCCTGCCATCTGGGGACCAGAGTTGGC +
Preference number: 1 (lower is better)
Translates to: LWRTSHLCRTSREAS*VRQLCACHLGTRVG
Trigger: GCCAACTCTGGTCCCCAGATGGCAGGCGCACAACTGTCTTACCCAGGAGGCTTCCCTGGAGGTCCTGCACAGATGGCTGGTCCGCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR GCA 90 bp TGCAGGACCTCCAGGGAAGCCTCCTGGGTAAGACAGTTGTGCGCCTaGCATCTGGGGACCAGAGTTGGCCTGCTGCGGAGGATATCCAGC +
Preference number: 1 (lower is better)
Translates to: CRTSREASWVRQLCA*HLGTRVGLLRRISS
Trigger: GCTGGATATCCTCCGCAGCAGGCCAACTCTGGTCCCCAGATGGCAGGCGCACAACTGTCTTACCCAGGAGGCTTCCCTGGAGGTCCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR CCA 90 bp GGAGGATATCCAGCACCCAAGGTCTGGCCTGGAAGAGGTGGGGGCTaGTACTGGGCATTTGGAGGAGGAGGCCCAGAGAGCCCATCTGGT +
Preference number: 1 (lower is better)
Translates to: GGYPAPKVWPGRGGG*YWAFGGGGPESPSG
Trigger: ACCAGATGGGCTCTCTGGGCCTCCTCCTCCAAATGCCCAGTACCAGCCCCCACCTCTTCCAGGCCAGACCTTGGGTGCTGGATATCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR CCA 90 bp GGACCAGAGTTGGCCTGCTGCGGAGGATATCCAGCACCCAAGGTCTaGCCTGGAAGAGGTGGGGGCTGGTACTGGGCATTTGGAGGAGGA +
Preference number: 1 (lower is better)
Translates to: GPELACCGGYPAPKV*PGRGGGWYWAFGGG
Trigger: TCCTCCTCCAAATGCCCAGTACCAGCCCCCACCTCTTCCAGGCCAGACCTTGGGTGCTGGATATCCTCCGCAGCAGGCCAACTCTGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR GCA 90 bp CATCTGTGCAGGACCTCCAGGGAAGCCTCCTGGGTAAGACAGTTGTaGGCCTGCCATCTGGGGACCAGAGTTGGCCTGCTGCGGAGGATA +
Preference number: 1 (lower is better)
Translates to: HLCRTSREASWVRQL*ACHLGTRVGLLRRI
Trigger: TATCCTCCGCAGCAGGCCAACTCTGGTCCCCAGATGGCAGGCGCACAACTGTCTTACCCAGGAGGCTTCCCTGGAGGTCCTGCACAGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR CCA 90 bp ATCACCTGGATTGGGCTAGGGATAGAGTCAGGATCCAGCTTCTTCTaGGGCTGTGGCGGACCAGCCATCTGTGCAGGACCTCCAGGGAAG +
Preference number: 1 (lower is better)
Translates to: ITWIGLGIESGSSFF*GCGGPAICAGPPGK
Trigger: CTTCCCTGGAGGTCCTGCACAGATGGCTGGTCCGCCACAGCCCCAGAAGAAGCTGGATCCTGACTCTATCCCTAGCCCAATCCAGGTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR TCA 90 bp GAGGCACCAGGACCATTGAGTGTGGTGGGTGGTGGTGGAAGAACTTaGGATCCAGGCTGCAAAATGGAAGGCTGTGGAGGTCGTGGAGGA +
Preference number: 1 (lower is better)
Translates to: EAPGPLSVVGGGGRT*DPGCKMEGCGGRGG
Trigger: TCCTCCACGACCTCCACAGCCTTCCATTTTGCAGCCTGGATCTCAAGTTCTTCCACCACCACCCACCACACTCAATGGTCCTGGTGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR TCA 90 bp ATTGTGCAGAGGGTTGGTATGGTGCATGTGAGGATGCCACATTGTTaGCAGGTGGAGGGCCTGGAAATCTTTGGGGAGGGTGACCAGTGG +
Preference number: 1 (lower is better)
Translates to: IVQRVGMVHVRMPHC*QVEGLEIFGEGDQW
Trigger: CCACTGGTCACCCTCCCCAAAGATTTCCAGGCCCTCCACCTGTCAACAATGTGGCATCCTCACATGCACCATACCAACCCTCTGCACAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR TCA 90 bp CTGGTCTGTACATTGGTAGAGGCAAAGGTGAGGCACCAGGACCATTaGGTGTGGTGGGTGGTGGTGGAAGAACTTGAGATCCAGGCTGCA +
Preference number: 1 (lower is better)
Translates to: LVCTLVEAKVRHQDH*VWWVVVEELEIQAA
Trigger: TGCAGCCTGGATCTCAAGTTCTTCCACCACCACCCACCACACTCAATGGTCCTGGTGCCTCACCTTTGCCTCTACCAATGTACAGACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR TCA 90 bp GAGTCGTTTTTCTCTTCCTGGAAGTGGCTGGGCCTTTTAAGGCCCTaGGCCGACACTTTGGGTAGGAGGCCAAAGAGTCACAGCAAACTG +
Preference number: 1 (lower is better)
Translates to: ESFFSSWKWLGLLRP*ADTLGRRPKSHSKL
Trigger: CAGTTTGCTGTGACTCTTTGGCCTCCTACCCAAAGTGTCGGCTCAGGGCCTTAAAAGGCCCAGCCACTTCCAGGAAGAGAAAAACGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509818.5
3UTR TCA 90 bp TTTGGTCACCTTTCTAAGAAAGCTGGGGGCTTGGGTGAAGACATCTaGGGAGCTGGTGGGCTCGCTGGAGGACTTTGTCCAAATGCTTTG +
Preference number: 1 (lower is better)
Translates to: FGHLSKKAGGLGEDI*GAGGLAGGLCPNAL
Trigger: CAAAGCATTTGGACAAAGTCCTCCAGCGAGCCCACCAGCTCCTCAGATGTCTTCACCCAAGCCCCCAGCTTTCTTAGAAAGGTGACCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509818.5
3UTR CCA 90 bp GAAAGAGGAAGAGTGTCACAGAGCAGCCGTGAGCCACGCAGTCCTTaGCCAATGAGTCATAGACATTTGTTTGGGGCTGGAAAAGTATCT +
Preference number: 1 (lower is better)
Translates to: ERGRVSQSSREPRSP*PMSHRHLFGAGKVS
Trigger: AGATACTTTTCCAGCCCCAAACAAATGTCTATGACTCATTGGCCAAGGACTGCGTGGCTCACGGCTGCTCTGTGACACTCTTCCTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR TCA 90 bp GAAGAGTGTCACAGAGCAGCCGTGAGCCACGCAGTCCTTGGCCAATaGGTCATAGACATTTGTTTGGGGCTGGAAAAGTATCTTCTCTTT +
Preference number: 1 (lower is better)
Translates to: EECHRAAVSHAVLGQ*VIDICLGLEKYLLF
Trigger: AAAGAGAAGATACTTTTCCAGCCCCAAACAAATGTCTATGACTCATTGGCCAAGGACTGCGTGGCTCACGGCTGCTCTGTGACACTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR TCA 90 bp TGCAGTTTAAGCCAAGATTGTGAATCCGAAGTCTTCTTTGACCACTaGTTGTCGTGTAAAGCACAGCACACTGGATTAAGGCTCCACTGT +
Preference number: 1 (lower is better)
Translates to: CSLSQDCESEVFFDH*LSCKAQHTGLRLHC
Trigger: ACAGTGGAGCCTTAATCCAGTGTGCTGTGCTTTACACGACAATCAGTGGTCAAAGAAGACTTCGGATTCACAATCTTGGCTTAAACTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR GCA 90 bp GAGCATCTGTCTCACAGCTCTTATAAAGATCAGCTAGCTGAGAGCTaGAGTTTAAGCCAAGATTGTGAATCCGAAGTCTTCTTTGACCAC +
Preference number: 1 (lower is better)
Translates to: EHLSHSSYKDQLAES*SLSQDCESEVFFDH
Trigger: GTGGTCAAAGAAGACTTCGGATTCACAATCTTGGCTTAAACTGCAGCTCTCAGCTAGCTGATCTTTATAAGAGCTGTGAGACAGATGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR TCA 90 bp GTTGGAAATAGAATGGTGGAACTGAGGGAACATAATCTGCTGTGTTaGGACACAAGAATTCTGAGTCGTTTTTCTCTTCCTGGAAGTGGC +
Preference number: 1 (lower is better)
Translates to: VGNRMVELREHNLLC*DTRILSRFSLPGSG
Trigger: GCCACTTCCAGGAAGAGAAAAACGACTCAGAATTCTTGTGTCTCAACACAGCAGATTATGTTCCCTCAGTTCCACCATTCTATTTCCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509818.5
3UTR TCA 90 bp TCCTTTAGGAATCTCTCCATCTTCATAGATATTATTTTTCACAAGTaGACTGGCTTGCTGCAGAAGGACTTGCACAATTCTTCCGGTAAC +
Preference number: 1 (lower is better)
Translates to: SFRNLSIFIDIIFHK*TGLLQKDLHNSSGN
Trigger: GTTACCGGAAGAATTGTGCAAGTCCTTCTGCAGCAAGCCAGTTCACTTGTGAAAAATAATATCTATGAAGATGGAGAGATTCCTAAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR TCA 90 bp TTCTTCTTCCATAGACACCTGGTTGCTTCCTCCTTTTGGCTATTGTaGATACTGTCTGCAATAATCCAAAGTGGCAACATATTCATAAGA +
Preference number: 1 (lower is better)
Translates to: FFFHRHLVASSFWLL*ILSAIIQSGNIFIR
Trigger: TCTTATGAATATGTTGCCACTTTGGATTATTGCAGACAGTATTCACAATAGCCAAAAGGAGGAAGCAACCAGGTGTCTATGGAAGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR TCA 90 bp TCTGGTCCAACAAATTATGAATCACAGATTGGGATTCTTGATAGTTaGCAAGGAAACCATCCAACAAAGGAACAAAGACTTCTCCAACAT +
Preference number: 1 (lower is better)
Translates to: SGPTNYESQIGILDS*QGNHPTKEQRLLQH
Trigger: ATGTTGGAGAAGTCTTTGTTCCTTTGTTGGATGGTTTCCTTGTCAACTATCAAGAATCCCAATCTGTGATTCATAATTTGTTGGACCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR CCA 90 bp TTCCTCCTTTTGGCTATTGTGAATACTGTCTGCAATAATCCAAAGTaGCAACATATTCATAAGATCCTAGAGATAACTCTGGTTTCTCAT +
Preference number: 1 (lower is better)
Translates to: FLLLAIVNTVCNNPK*QHIHKILEITLVSH
Trigger: ATGAGAAACCAGAGTTATCTCTAGGATCTTATGAATATGTTGCCACTTTGGATTATTGCAGACAGTATTCACAATAGCCAAAAGGAGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR CAA 90 bp AGCCATCTGTGCAGGACCTCCAGGGAAGCCTCCTGGGTAAGACAGTaGTGCGCCTGCCATCTGGGGACCAGAGTTGGCCTGCTGCGGAGG +
Preference number: 2 (lower is better)
Translates to: SHLCRTSREASWVRQ*CACHLGTRVGLLRR
Trigger: CCTCCGCAGCAGGCCAACTCTGGTCCCCAGATGGCAGGCGCACAACTGTCTTACCCAGGAGGCTTCCCTGGAGGTCCTGCACAGATGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR CCA 90 bp GAAGCCTCCTGGGTAAGACAGTTGTGCGCCTGCCATCTGGGGACCAGAGTTGGCGGTGGGGGCTGGTACTaGGCATTTGGAGGAGGAGGC +
Preference number: 2 (lower is better)
Translates to: EASWVRQLCACHLGTRVGGGGWY*AFGGGG
Trigger: GCCTCCTCCTCCAAATGCCCAGTACCAGCCCCCACC...GCCAACTCTGGTCCCCAGATGGCAGGCGCACAACTGTCTTACCCAGGAGGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR TCA 90 bp GTGTCACAGAGCAGCCGTGAGCCACGCAGTCCTTGGCCAATGAGTCATAGACATAGGCACCAGGACCATTaGGTGTGGTGGGTGGTGGTG +
Preference number: 2 (lower is better)
Translates to: VSQSSREPRSPWPMSHRHRHQDH*VWWVVV
Trigger: CACCACCACCCACCACACTCAATGGTCCTGGTGCCT...ATGTCTATGACTCATTGGCCAAGGACTGCGTGGCTCACGGCTGCTCTGTGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR CCA 90 bp GTGTCACAGAGCAGCCGTGAGCCACGCAGTCCTTGGCCAATGAGTCATAGACATTCTGGCCTCTGGTGTTaGTGGCATAAACTTGTCCTC +
Preference number: 2 (lower is better)
Translates to: VSQSSREPRSPWPMSHRHSGLWC*WHKLVL
Trigger: GAGGACAAGTTTATGCCACCAACACCAGAGGCCAGA...ATGTCTATGACTCATTGGCCAAGGACTGCGTGGCTCACGGCTGCTCTGTGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR CCA 90 bp CTTGCACCTGTTGCATCTGACTGGTCCACTCTCGCCGTGATTTACCAAGTAAAGCTGGTACTGGGCATTTaGAGGAGGAGGCCCAGAGAG +
Preference number: 2 (lower is better)
Translates to: LAPVASDWSTLAVIYQVKLVLGI*RRRPRE
Trigger: CTCTCTGGGCCTCCTCCTCCAAATGCCCAGTACCAG...CTTTACTTGGTAAATCACGGCGAGAGTGGACCAGTCAGATGCAACAGGTGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR TCA 90 bp GGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGCACCTGTTGCATCTaGCTGGTCCACTCTCGCCGT +
Preference number: 2 (lower is better)
Translates to: GGINLSSSAGSIILNHLDCTCCI*LVHSRR
Trigger: ACGGCGAGAGTGGACCAGTCAGATGCAACAGGTGCA...ATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
3UTR-3UTR TCA 90 bp ATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGGGCTTGCACCTGTTGCATCTaGCTGGTCCACTCTCGCCGT +
Preference number: 2 (lower is better)
Translates to: INLSSSAGSIILNHLDWACTCCI*LVHSRR
Trigger: ACGGCGAGAGTGGACCAGTCAGATGCAACAGGTGCA...AGCCCAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
3UTR-3UTR GCA 90 bp CACTCTCGCCGTGATTTACCAAGTAAAGGGGACTCTCATTTGAAGGAATGGTGGAGACAGTTGTGCGCCTaGCATCTGGGGACCAGAGTT +
Preference number: 2 (lower is better)
Translates to: HSRRDLPSKGDSHLKEWWRQLCA*HLGTRV
Trigger: AACTCTGGTCCCCAGATGGCAGGCGCACAACTGTCT...CCACCATTCCTTCAAATGAGAGTCCCCTTTACTTGGTAAATCACGGCGAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR CCA 90 bp AAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTCCAGCACCCAAGGTCTaGCCTGGAAGAGGTGGGGGC +
Preference number: 2 (lower is better)
Translates to: KILEITLVSHSGPVFFQCPAPKV*PGRGGG
Trigger: GCCCCCACCTCTTCCAGGCCAGACCTTGGGTGCTGG...ACATTGGAAGAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR CCA 90 bp GTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATAGATGTGCGCCTGCCATCTaGGGACCAGAGTTGGCCTGC +
Preference number: 2 (lower is better)
Translates to: VSHSGPVFFQCGPDVGNRCAPAI*GPELAC
Trigger: GCAGGCCAACTCTGGTCCCCAGATGGCAGGCGCACA...TCTATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR CAA 90 bp CACTGGATTAAGGCTCCACTGTCTTCACTGAGTTTGTCATCGTGCTaGAACTCCACGGTCACTGCCTTGTCACAATCGATGGCAGCCATT +
Preference number: 2 (lower is better)
Translates to: HWIKAPLSSLSLSSC*NSTVTALSQSMAAI
Trigger: AATGGCTGCCATCGATTGTGACAAGGCAGTGACCGTGGAGTTCAAGCACGATGACAAACTCAGTGAAGACAGTGGAGCCTTAATCCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR TCA 90 bp CTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATGGCCTTTTAAGGCCCTaGGCCGACACTTTGGGTAGG +
Preference number: 2 (lower is better)
Translates to: LVSHSGPVFFQCGPDVGNGLLRP*ADTLGR
Trigger: CCTACCCAAAGTGTCGGCTCAGGGCCTTAAAAGGCC...ATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509818.5
3UTR-3UTR GCA 90 bp ATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGGGCTGGCCCCCAAAGGCCCTaGTGGCTTCATCATACCTTT +
Preference number: 2 (lower is better)
Translates to: INLSSSAGSIILNHLDWAGPQRP*WLHHTF
Trigger: AAAGGTATGATGAAGCCAGCAGGGCCTTTGGGGGCC...AGCCCAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR CCA 90 bp CTTGCACCTGTTGCATCTGACTGGTCCACTCTCGCCGTGATTTACCAAGTAAAGGAGGGATCTGGCCTCTaGTGTTGGTGGCATAAACTT +
Preference number: 2 (lower is better)
Translates to: LAPVASDWSTLAVIYQVKEGSGL*CWWHKL
Trigger: AAGTTTATGCCACCAACACCAGAGGCCAGATCCCTC...CTTTACTTGGTAAATCACGGCGAGAGTGGACCAGTCAGATGCAACAGGTGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
3UTR-3UTR CCA 90 bp GGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATAGAAAGCTGGGGGCTTaGGTGAAGACATCTGAGGAG +
Preference number: 2 (lower is better)
Translates to: GGINLSSSAGSIILNHLDRKLGA*VKTSEE
Trigger: CTCCTCAGATGTCTTCACCCAAGCCCCCAGCTTTCT...ATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509818.5
3UTR-3UTR CCA 90 bp AAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTATGGGGTCCAGGAGGTaGGGGACCCGGAGGCAACAT +
Preference number: 2 (lower is better)
Translates to: KILEITLVSHSGPVFFQCMGSRR*GTRRQH
Trigger: ATGTTGCCTCCGGGTCCCCCACCTCCTGGACCCCAT...ACATTGGAAGAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR TCA 90 bp ATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGGGCTCAGCTGGGTGACAGATaGAGTGGATATAGGACCTGG +
Preference number: 2 (lower is better)
Translates to: INLSSSAGSIILNHLDWAQLGDR*SGYRTW
Trigger: CCAGGTCCTATATCCACTTCATCTGTCACCCAGCTG...AGCCCAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR CCA 90 bp CTTTTGGCTATTGTGAATACTGTCTGCAATAATCCAAAGTGGCAACATATTCATGGGCCAGGGGGTCCCTaGCTTGGAGGAGCCATGCCT +
Preference number: 2 (lower is better)
Translates to: LLAIVNTVCNNPKWQHIHGPGGP*LGGAMP
Trigger: AGGCATGGCTCCTCCAAGCCAGGGACCCCCTGGCCC...ATGAATATGTTGCCACTTTGGATTATTGCAGACAGTATTCACAATAGCCAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR GCA 90 bp CTTGCACCTGTTGCATCTGACTGGTCCACTCTCGCCGTGATTTACCAAGTAAAGAAAACCCACTCGAATTaGAGACGTCTCTTCTTGCTC +
Preference number: 2 (lower is better)
Translates to: LAPVASDWSTLAVIYQVKKTHSN*RRLFLL
Trigger: GAGCAAGAAGAGACGTCTGCAATTCGAGTGGGTTTT...CTTTACTTGGTAAATCACGGCGAGAGTGGACCAGTCAGATGCAACAGGTGCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
3UTR-3UTR CCA 90 bp TGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCGGCCTCTGGTGTTGGTaGCATAAACTTGTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: WKTVCCTTDESRTGISLVGLWCW*HKLVLL
Trigger: GAGGAGGACAAGTTTATGCCACCAACACCAGAGGCC...GACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
3UTR-3UTR CCA 90 bp AAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTTCCAGGGAAGCCTCCTaGGTAAGACAGTTGTGCGCC +
Preference number: 2 (lower is better)
Translates to: KILEITLVSHSGPVFFQCSREAS*VRQLCA
Trigger: GGCGCACAACTGTCTTACCCAGGAGGCTTCCCTGGA...ACATTGGAAGAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR TCA 90 bp GGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATATGTTGTACAACGGATaGATCGAGGACTGGCATTTC +
Preference number: 2 (lower is better)
Translates to: GGINLSSSAGSIILNHLDMLYNG*IEDWHF
Trigger: GAAATGCCAGTCCTCGATTCATCCGTTGTACAACAT...ATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
3UTR-3UTR GCA 90 bp CATATTCATAAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCTGGGTAAGACAGTTGTaGGCCTGCCATCTGGGGACC +
Preference number: 2 (lower is better)
Translates to: HIHKILEITLVSHSGPVFWVRQL*ACHLGT
Trigger: GGTCCCCAGATGGCAGGCGCACAACTGTCTTACCCA...GAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTTATGAATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR GCA 90 bp GTGTCACAGAGCAGCCGTGAGCCACGCAGTCCTTGGCCAATGAGTCATAGACATATTGTGAATACTGTCTaGAATAATCCAAAGTGGCAA +
Preference number: 2 (lower is better)
Translates to: VSQSSREPRSPWPMSHRHIVNTV*NNPKWQ
Trigger: TTGCCACTTTGGATTATTGCAGACAGTATTCACAAT...ATGTCTATGACTCATTGGCCAAGGACTGCGTGGCTCACGGCTGCTCTGTGACAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR CCA 90 bp CTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATTCTGGCCTCTGGTGTTaGTGGCATAAACTTGTCCTC +
Preference number: 2 (lower is better)
Translates to: LVSHSGPVFFQCGPDVGNSGLWC*WHKLVL
Trigger: GAGGACAAGTTTATGCCACCAACACCAGAGGCCAGA...ATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
3UTR-3UTR CCA 90 bp CATATTCATAAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCGACAGGTGGAGGGCCTaGAAATCTTTGGGGAGGGTG +
Preference number: 2 (lower is better)
Translates to: HIHKILEITLVSHSGPVFDRWRA*KSLGRV
Trigger: CACCCTCCCCAAAGATTTCCAGGCCCTCCACCTGTC...GAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTTATGAATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR CCA 90 bp CATGGTCTTCAGTTCTTCACATATGAGCTTGACAAGTCCATTCTTTATGTTACTACCCAAGGTCTGGCCTaGAAGAGGTGGGGGCTGGTA +
Preference number: 2 (lower is better)
Translates to: HGLQFFTYELDKSILYVTTQGLA*KRWGLV
Trigger: TACCAGCCCCCACCTCTTCCAGGCCAGACCTTGGGT...AGTAACATAAAGAATGGACTTGTCAAGCTCATATGTGAAGAACTGAAGACCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR GCA 90 bp CTTGCACCTGTTGCATCTGACTGGTCCACTCTCGCCGTGATTTACCAAGTAAAGGCAGACGTCTCTTCTTaGTCTTCCTTTGGAATTTTT +
Preference number: 2 (lower is better)
Translates to: LAPVASDWSTLAVIYQVKADVSS*SSFGIF
Trigger: AAAAATTCCAAAGGAAGAGCAAGAAGAGACGTCTGC...CTTTACTTGGTAAATCACGGCGAGAGTGGACCAGTCAGATGCAACAGGTGCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
3UTR-3UTR CCA 90 bp AAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTTGGAGGGATCTGGCCTCTaGTGTTGGTGGCATAAACTT +
Preference number: 2 (lower is better)
Translates to: KTVCCTTDESRTGISLVLEGSGL*CWWHKL
Trigger: AAGTTTATGCCACCAACACCAGAGGCCAGATCCCTC...CAAGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
3UTR-3UTR CCA 90 bp TGGCTGGTGTTCAAACAGCTTTTAGGAAGTGATCCTTCAGTTGCATCTTACAAACCTGTTGCATCTGACTaGTCCACTCTCGCCGTGATT +
Preference number: 2 (lower is better)
Translates to: WLVFKQLLGSDPSVASYKPVASD*STLAVI
Trigger: AATCACGGCGAGAGTGGACCAGTCAGATGCAACAGG...TTTGTAAGATGCAACTGAAGGATCACTTCCTAAAAGCTGTTTGAACACCAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR CCA 90 bp GTTATATGTGATAAAACCCACTCGAATTGCAGACGTCTCTTCTTGCTCTTCCTTATCCAGGCTGCAAAATaGAAGGCTGTGGAGGTCGTG +
Preference number: 2 (lower is better)
Translates to: VICDKTHSNCRRLFLLFLIQAAK*KAVEVV
Trigger: CACGACCTCCACAGCCTTCCATTTTGCAGCCTGGAT...AAGGAAGAGCAAGAAGAGACGTCTGCAATTCGAGTGGGTTTTATCACATATAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR TCA 90 bp GTTATATGTGATAAAACCCACTCGAATTGCAGACGTCTCTTCTTGCTCTTCCTTAAGGGGACTCTCATTTaGAGGAATGGTGGCAAAGGG +
Preference number: 2 (lower is better)
Translates to: VICDKTHSNCRRLFLLFLKGTLI*RNGGKG
Trigger: CCCTTTGCCACCATTCCTTCAAATGAGAGTCCCCTT...AAGGAAGAGCAAGAAGAGACGTCTGCAATTCGAGTGGGTTTTATCACATATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
3UTR-3UTR CCA 90 bp GACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTTCATTCTCAATCACCTaGATTGGGCTAGGGATAGAG +
Preference number: 2 (lower is better)
Translates to: DVHGKQYVVQRMNRGLAFSFSIT*IGLGIE
Trigger: CTCTATCCCTAGCCCAATCCAGGTGATTGAGAATGA...AAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
3UTR-3UTR CCA 90 bp CTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATCTTGTCCTCCTCTGCTaGCTCTATCATTCTCAATCA +
Preference number: 2 (lower is better)
Translates to: LVSHSGPVFFQCGPDVGNLVLLC*LYHSQS
Trigger: TGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAG...ATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
3UTR-3UTR GCA 90 bp GACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTAAACTTGTCCTCCTCTaGTGGCTCTATCATTCTCAA +
Preference number: 2 (lower is better)
Translates to: DVHGKQYVVQRMNRGLAFKLVLL*WLYHSQ
Trigger: TTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTT...AAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
3UTR-3UTR GCA 90 bp CTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATAAACTTGTCCTCCTCTaGTGGCTCTATCATTCTCAA +
Preference number: 2 (lower is better)
Translates to: LVSHSGPVFFQCGPDVGNKLVLL*WLYHSQ
Trigger: TTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTT...ATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAACCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
3UTR-3UTR CCA 90 bp ATCCATTCTTCTTCCATAGACACCTGGTTGCTTCCTCCTTTTGGCTATTGTGAATCATTCTCAATCACCTaGATTGGGCTAGGGATAGAG +
Preference number: 2 (lower is better)
Translates to: IHSSSIDTWLLPPFGYCESFSIT*IGLGIE
Trigger: CTCTATCCCTAGCCCAATCCAGGTGATTGAGAATGA...TTCACAATAGCCAAAAGGAGGAAGCAACCAGGTGTCTATGGAAGAAGAATGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR CCA 90 bp GTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATAGACTTGTCCTCCTCTGCTaGCTCTATCATTCTCAATCA +
Preference number: 2 (lower is better)
Translates to: VSHSGPVFFQCGPDVGNRLVLLC*LYHSQS
Trigger: TGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAG...TCTATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
3UTR-3UTR CCA 90 bp CATGGTCTTCAGTTCTTCACATATGAGCTTGACAAGTCCATTCTTTATGTTACTCCTGTTGCATCTGACTaGTCCACTCTCGCCGTGATT +
Preference number: 2 (lower is better)
Translates to: HGLQFFTYELDKSILYVTPVASD*STLAVI
Trigger: AATCACGGCGAGAGTGGACCAGTCAGATGCAACAGG...AGTAACATAAAGAATGGACTTGTCAAGCTCATATGTGAAGAACTGAAGACCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
3UTR-3UTR CCA 90 bp GTTATATGTGATAAAACCCACTCGAATTGCAGACGTCTCTTCTTGCTCTTCCTTCATGAAGATAAAGGCTaGTGGGTTGGGAGGCTTACT +
Preference number: 2 (lower is better)
Translates to: VICDKTHSNCRRLFLLFLHEDKG*WVGRLT
Trigger: AGTAAGCCTCCCAACCCACCAGCCTTTATCTTCATG...AAGGAAGAGCAAGAAGAGACGTCTGCAATTCGAGTGGGTTTTATCACATATAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
3UTR-3UTR CCA 90 bp TCTATCCAAGTGCATCTGGAAATTGTTGTATTTGTAAAGGGTTCCTCCAGTGAGGTTTTTGAGCTTCCCTaGTGCTTCAGCAGTTGGCAA +
Preference number: 2 (lower is better)
Translates to: SIQVHLEIVVFVKGSSSEVFELP*CFSSWQ
Trigger: TTGCCAACTGCTGAAGCACCAGGGAAGCTCAAAAAC...CTCACTGGAGGAACCCTTTACAAATACAACAATTTCCAGATGCACTTGGATAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR TCA 90 bp AAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTATGTTGTACAACGGATaGATCGAGGACTGGCATTTC +
Preference number: 2 (lower is better)
Translates to: KILEITLVSHSGPVFFQCMLYNG*IEDWHF
Trigger: GAAATGCCAGTCCTCGATTCATCCGTTGTACAACAT...ACATTGGAAGAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
3UTR-3UTR TCA 90 bp GTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATAGATTGCTTAGCCATATCTaGCGTGCATGGAAAACAGTA +
Preference number: 2 (lower is better)
Translates to: VSHSGPVFFQCGPDVGNRLLSHI*RAWKTV
Trigger: TACTGTTTTCCATGCACGTCAGATATGGCTAAGCAA...TCTATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
3UTR-3UTR TCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGCCTGAGCACCAAAGCTaGAGTTCTAAATGCCATCTC +
Preference number: 2 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWPEHQS*SSKCHL
Trigger: GAGATGGCATTTAGAACTTCAGCTTTGGTGCTCAGG...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
3UTR-3UTR TCA 90 bp CATGGTCTTCAGTTCTTCACATATGAGCTTGACAAGTCCATTCTTTATGTTACTTTGGTATGGTGCATGTaGGGATGCCACATTGTTGAC +
Preference number: 2 (lower is better)
Translates to: HGLQFFTYELDKSILYVTLVWCM*GCHIVD
Trigger: GTCAACAATGTGGCATCCTCACATGCACCATACCAA...AGTAACATAAAGAATGGACTTGTCAAGCTCATATGTGAAGAACTGAAGACCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR TCA 90 bp GTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATAGATCTCTCTTTTCTTCTTaGGAAATTGCAGTAAAGGAG +
Preference number: 2 (lower is better)
Translates to: VSHSGPVFFQCGPDVGNRSLFSS*EIAVKE
Trigger: CTCCTTTACTGCAATTTCTCAAGAAGAAAAGAGAGA...TCTATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR GCA 90 bp GTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATAGACATCATTCACACAGTTaGAAAATCCACACTGATATC +
Preference number: 2 (lower is better)
Translates to: VSHSGPVFFQCGPDVGNRHHSHS*KIHTDI
Trigger: GATATCAGTGTGGATTTTGCAACTGTGTGAATGATG...TCTATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
3UTR-3UTR GCA 90 bp AAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGCAGACGTCTCTTCTTaGTCTTCCTTTGGAATTTTT +
Preference number: 2 (lower is better)
Translates to: KILEITLVSHSGPVFFQCADVSS*SSFGIF
Trigger: AAAAATTCCAAAGGAAGAGCAAGAAGAGACGTCTGC...ACATTGGAAGAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
3UTR-3UTR CCA 90 bp CTTTTGGCTATTGTGAATACTGTCTGCAATAATCCAAAGTGGCAACATATTCATGATTGTGCAGAGGGTTaGTATGGTGCATGTGAGGAT +
Preference number: 2 (lower is better)
Translates to: LLAIVNTVCNNPKWQHIHDCAEG*YGACED
Trigger: ATCCTCACATGCACCATACCAACCCTCTGCACAATC...ATGAATATGTTGCCACTTTGGATTATTGCAGACAGTATTCACAATAGCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR TCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGAATTGGGAGAGGAACTaGGACAACTTTTTACCCCAA +
Preference number: 2 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWNWERN*DNFLPQ
Trigger: TTGGGGTAAAAAGTTGTCTCAGTTCCTCTCCCAATT...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
3UTR GCA 72 bp TCCAGGGAAGCCTCCTGGGTAAGACAGTTGTGCGCCTaGCATCTGGGGACCAGAGTTGGCCTGCTGCGGAGG +
Preference number: 3 (lower is better)
Translates to: SREASWVRQLCA*HLGTRVGLLRR
Trigger: CCTCCGCAGCAGGCCAACTCTGGTCCCCAGATGGCAGGCGCACAACTGTCTTACCCAGGAGGCTTCCCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR CCA 72 bp CTGCTGCGGAGGATATCCAGCACCCAAGGTCTGGCCTaGAAGAGGTGGGGGCTGGTACTGGGCATTTGGAGG +
Preference number: 3 (lower is better)
Translates to: LLRRISSTQGLA*KRWGLVLGIWR
Trigger: CCTCCAAATGCCCAGTACCAGCCCCCACCTCTTCCAGGCCAGACCTTGGGTGCTGGATATCCTCCGCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR CCA 72 bp ACCAGCCATCTGTGCAGGACCTCCAGGGAAGCCTCCTaGGTAAGACAGTTGTGCGCCTGCCATCTGGGGACC +
Preference number: 3 (lower is better)
Translates to: TSHLCRTSREAS*VRQLCACHLGT
Trigger: GGTCCCCAGATGGCAGGCGCACAACTGTCTTACCCAGGAGGCTTCCCTGGAGGTCCTGCACAGATGGCTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR GCA 72 bp CCCACGCTGGAGTCGAGTGGCATGATCTCGGCTCACTaGAACGTCCACCTCCTGGGTTCAAGCTATTCTCCT +
Preference number: 3 (lower is better)
Translates to: PTLESSGMISAH*NVHLLGSSYSP
Trigger: AGGAGAATAGCTTGAACCCAGGAGGTGGACGTTGCAGTGAGCCGAGATCATGCCACTCGACTCCAGCGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR CCA 72 bp GTGGAGGGCCTGGAAATCTTTGGGGAGGGTGACCAGTaGCATGAGCTCCATTCTGACCAAACTGATGGGGTC +
Preference number: 3 (lower is better)
Translates to: VEGLEIFGEGDQ*HELHSDQTDGV
Trigger: GACCCCATCAGTTTGGTCAGAATGGAGCTCATGCCACTGGTCACCCTCCCCAAAGATTTCCAGGCCCTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR CAA 90 bp GGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATCAGGGGGTCCCTGGCTaGGAGGAGCCATGCCTGAAC +
Preference number: 3 (lower is better)
Translates to: GGINLSSSAGSIILNHLDQGVPG*EEPCLN
Trigger: GTTCAGGCATGGCTCCTCCAAGCCAGGGACCCCCTG...ATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR TCA 72 bp CTTTCTAAGAAAGCTGGGGGCTTGGGTGAAGACATCTaGGGAGCTGGTGGGCTCGCTGGAGGACTTTGTCCA +
Preference number: 3 (lower is better)
Translates to: LSKKAGGLGEDI*GAGGLAGGLCP
Trigger: TGGACAAAGTCCTCCAGCGAGCCCACCAGCTCCTCAGATGTCTTCACCCAAGCCCCCAGCTTTCTTAGAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509818.5
3UTR TCA 72 bp AGGGTTGGTATGGTGCATGTGAGGATGCCACATTGTTaGCAGGTGGAGGGCCTGGAAATCTTTGGGGAGGGT +
Preference number: 3 (lower is better)
Translates to: RVGMVHVRMPHC*QVEGLEIFGEG
Trigger: ACCCTCCCCAAAGATTTCCAGGCCCTCCACCTGTCAACAATGTGGCATCCTCACATGCACCATACCAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR TCA 72 bp GGACCATTGAGTGTGGTGGGTGGTGGTGGAAGAACTTaGGATCCAGGCTGCAAAATGGAAGGCTGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: GPLSVVGGGGRT*DPGCKMEGCGG
Trigger: ACCTCCACAGCCTTCCATTTTGCAGCCTGGATCTCAAGTTCTTCCACCACCACCCACCACACTCAATGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR CCA 72 bp AGAGTGTCACAGAGCAGCCGTGAGCCACGCAGTCCTTaGCCAATGAGTCATAGACATTTGTTTGGGGCTGGA +
Preference number: 3 (lower is better)
Translates to: RVSQSSREPRSP*PMSHRHLFGAG
Trigger: TCCAGCCCCAAACAAATGTCTATGACTCATTGGCCAAGGACTGCGTGGCTCACGGCTGCTCTGTGACACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR GCA 72 bp GGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTaGTGGCTCTATCATTCTCAATCACCTGGATTGGGC +
Preference number: 3 (lower is better)
Translates to: GLWCWWHKLVLL*WLYHSQSPGLG
Trigger: GCCCAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
3UTR GCA 72 bp CAACATTCCCCTAGTGGCGGTGGCCCCCAAAGGCCCTaGTGGCTTCATCATACCTTTAAAGACTTCTCTTTG +
Preference number: 3 (lower is better)
Translates to: QHSPSGGGPQRP*WLHHTFKDFSL
Trigger: CAAAGAGAAGTCTTTAAAGGTATGATGAAGCCAGCAGGGCCTTTGGGGGCCACCGCCACTAGGGGAATGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR CAA 90 bp CTTGCACCTGTTGCATCTGACTGGTCCACTCTCGCCGTGATTTACCAAGTAAAGGTTGGTGGCATAAACTaGTCCTCCTCTGCTGGCTCT +
Preference number: 3 (lower is better)
Translates to: LAPVASDWSTLAVIYQVKVGGIN*SSSAGS
Trigger: AGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAAC...CTTTACTTGGTAAATCACGGCGAGAGTGGACCAGTCAGATGCAACAGGTGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
3UTR-3UTR CAA 90 bp GTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATAGAAGGGCCTGGAAATCTTaGGGGAGGGTGACCAGTGGC +
Preference number: 3 (lower is better)
Translates to: VSHSGPVFFQCGPDVGNRRAWKS*GRVTSG
Trigger: GCCACTGGTCACCCTCCCCAAAGATTTCCAGGCCCT...TCTATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR CAA 90 bp TCTGACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCAGTTGGTGGCATAAACTaGTCCTCCTCTGCTGGCTCT +
Preference number: 3 (lower is better)
Translates to: SDVHGKQYVVQRMNRGLAVGGIN*SSSAGS
Trigger: AGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAAC...TGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
3UTR CCA 72 bp GGACAGTCTGCTGCCTTTAGTGCTTCCATGCCAGCCTaGATGACAGGAGCAAAGACAGTCTCATTTTCATTA +
Preference number: 3 (lower is better)
Translates to: GQSAAFSASMPA*MTGAKTVSFSL
Trigger: TAATGAAAATGAGACTGTCTTTGCTCCTGTCATCCAGGCTGGCATGGAAGCACTAAAGGCAGCAGACTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR CAA 90 bp CACTCTCGCCGTGATTTACCAAGTAAAGGGGACTCTCATTTGAAGGAATGGTGGAAAGGGGACTCTCATTaGAAGGAATGGTGGCAAAGG +
Preference number: 3 (lower is better)
Translates to: HSRRDLPSKGDSHLKEWWKGDSH*KEWWQR
Trigger: CCTTTGCCACCATTCCTTCAAATGAGAGTCCCCTTT...CCACCATTCCTTCAAATGAGAGTCCCCTTTACTTGGTAAATCACGGCGAGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
3UTR-3UTR CAA 90 bp GTTATATGTGATAAAACCCACTCGAATTGCAGACGTCTCTTCTTGCTCTTCCTTGAGGATGCCACATTGTaGACAGGTGGAGGGCCTGGA +
Preference number: 3 (lower is better)
Translates to: VICDKTHSNCRRLFLLFLEDATL*TGGGPG
Trigger: TCCAGGCCCTCCACCTGTCAACAATGTGGCATCCTC...AAGGAAGAGCAAGAAGAGACGTCTGCAATTCGAGTGGGTTTTATCACATATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR CAA 90 bp GTGTCACAGAGCAGCCGTGAGCCACGCAGTCCTTGGCCAATGAGTCATAGACATCGTATATACCACATTTaGCTTATCCATTCTTCTTCC +
Preference number: 3 (lower is better)
Translates to: VSQSSREPRSPWPMSHRHRIYHI*LIHSSS
Trigger: GGAAGAAGAATGGATAAGCAAAATGTGGTATATACG...ATGTCTATGACTCATTGGCCAAGGACTGCGTGGCTCACGGCTGCTCTGTGACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR CAA 90 bp CTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATCATCTGGTCTGTACATaGGTAGAGGCAAAGGTGAGG +
Preference number: 3 (lower is better)
Translates to: LVSHSGPVFFQCGPDVGNHLVCT*VEAKVR
Trigger: CCTCACCTTTGCCTCTACCAATGTACAGACCAGATG...ATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR TCA 72 bp GGGAACATAATCTGCTGTGTTGAGACACAAGAATTCTaGGTCGTTTTTCTCTTCCTGGAAGTGGCTGGGCCT +
Preference number: 3 (lower is better)
Translates to: GNIICCVETQEF*VVFLFLEVAGP
Trigger: AGGCCCAGCCACTTCCAGGAAGAGAAAAACGACTCAGAATTCTTGTGTCTCAACACAGCAGATTATGTTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509818.5
3UTR TCA 72 bp ACTGAGGTCCAGTATCATACAATCCAGATAGCTCCTTaGTGGTCTTGCTTGGGTCAAGGAAACTTTGGGCTC +
Preference number: 3 (lower is better)
Translates to: TEVQYHTIQIAP*WSCLGQGNFGL
Trigger: GAGCCCAAAGTTTCCTTGACCCAAGCAAGACCATCAAGGAGCTATCTGGATTGTATGATACTGGACCTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR CAA 90 bp GTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATAGAATGGTGGCAAAGGGCTaGATGACAGCAGCTAATGGA +
Preference number: 3 (lower is better)
Translates to: VSHSGPVFFQCGPDVGNRMVAKG*MTAANG
Trigger: TCCATTAGCTGCTGTCATCAAGCCCTTTGCCACCAT...TCTATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
3UTR GCA 72 bp TTTTTCACAAGTGAACTGGCTTGCTGCAGAAGGACTTaGACAATTCTTCCGGTAACATGCCAACATATGGGC +
Preference number: 3 (lower is better)
Translates to: FFTSELACCRRT*TILPVTCQHMG
Trigger: GCCCATATGTTGGCATGTTACCGGAAGAATTGTGCAAGTCCTTCTGCAGCAAGCCAGTTCACTTGTGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR CAA 90 bp CATATTCATAAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCGCTCGCTGGAGGACTTaGTCCAAATGCTTTGGGAGA +
Preference number: 3 (lower is better)
Translates to: HIHKILEITLVSHSGPVFARWRT*SKCFGR
Trigger: TCTCCCAAAGCATTTGGACAAAGTCCTCCAGCGAGC...GAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTTATGAATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509818.5
3UTR TCA 72 bp AGCCAAGATTGTGAATCCGAAGTCTTCTTTGACCACTaGTTGTCGTGTAAAGCACAGCACACTGGATTAAGG +
Preference number: 3 (lower is better)
Translates to: SQDCESEVFFDH*LSCKAQHTGLR
Trigger: CCTTAATCCAGTGTGCTGTGCTTTACACGACAATCAGTGGTCAAAGAAGACTTCGGATTCACAATCTTGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR CAA 90 bp CATGGTCTTCAGTTCTTCACATATGAGCTTGACAAGTCCATTCTTTATGTTACTGTTGGTGGCATAAACTaGTCCTCCTCTGCTGGCTCT +
Preference number: 3 (lower is better)
Translates to: HGLQFFTYELDKSILYVTVGGIN*SSSAGS
Trigger: AGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAAC...AGTAACATAAAGAATGGACTTGTCAAGCTCATATGTGAAGAACTGAAGACCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
3UTR-3UTR CAA 90 bp TGGCTGGTGTTCAAACAGCTTTTAGGAAGTGATCCTTCAGTTGCATCTTACAAATGGTGGTGGAAGAACTaGAGATCCAGGCTGCAAAAT +
Preference number: 3 (lower is better)
Translates to: WLVFKQLLGSDPSVASYKWWWKN*RSRLQN
Trigger: ATTTTGCAGCCTGGATCTCAAGTTCTTCCACCACCA...TTTGTAAGATGCAACTGAAGGATCACTTCCTAAAAGCTGTTTGAACACCAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR-3UTR CAA 90 bp TCTATCCAAGTGCATCTGGAAATTGTTGTATTTGTAAAGGGTTCCTCCAGTGAGAGGACTGGCATTTCCTaGGTCTTGTATCATGCAATC +
Preference number: 3 (lower is better)
Translates to: SIQVHLEIVVFVKGSSSERTGIS*VLYHAI
Trigger: GATTGCATGATACAAGACCAAGGAAATGCCAGTCCT...CTCACTGGAGGAACCCTTTACAAATACAACAATTTCCAGATGCACTTGGATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR TCA 72 bp CATAGACACCTGGTTGCTTCCTCCTTTTGGCTATTGTaGATACTGTCTGCAATAATCCAAAGTGGCAACATA +
Preference number: 3 (lower is better)
Translates to: HRHLVASSFWLL*ILSAIIQSGNI
Trigger: TATGTTGCCACTTTGGATTATTGCAGACAGTATTCACAATAGCCAAAAGGAGGAAGCAACCAGGTGTCTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR CCA 72 bp GGTTGGGAGGCTTACTCTTTCTGCAATAATCCAAAGTaGCAACATATTCATAAGATCCTAGAGATAACTCTG +
Preference number: 3 (lower is better)
Translates to: GWEAYSFCNNPK*QHIHKILEITL
Trigger: CAGAGTTATCTCTAGGATCTTATGAATATGTTGCCACTTTGGATTATTGCAGAAAGAGTAAGCCTCCCAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509818.5
3UTR-3UTR CAA 90 bp CTTTTGGCTATTGTGAATACTGTCTGCAATAATCCAAAGTGGCAACATATTCATTCTTCACATATGAGCTaGACAAGTCCATTCTTTATG +
Preference number: 3 (lower is better)
Translates to: LLAIVNTVCNNPKWQHIHSSHMS*TSPFFM
Trigger: CATAAAGAATGGACTTGTCAAGCTCATATGTGAAGA...ATGAATATGTTGCCACTTTGGATTATTGCAGACAGTATTCACAATAGCCAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR CCA 72 bp TTGGCTATTGTGAATACTGTCTGCAATAATCCAAAGTaGCAACATATTCATAAGATCCTAGAGATAACTCTG +
Preference number: 3 (lower is better)
Translates to: LAIVNTVCNNPK*QHIHKILEITL
Trigger: CAGAGTTATCTCTAGGATCTTATGAATATGTTGCCACTTTGGATTATTGCAGACAGTATTCACAATAGCCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR TCA 72 bp ACAAATTATGAATCACAGATTGGGATTCTTGATAGTTaGCAAGGAAACCATCCAACAAAGGAACAAAGACTT +
Preference number: 3 (lower is better)
Translates to: TNYESQIGILDS*QGNHPTKEQRL
Trigger: AAGTCTTTGTTCCTTTGTTGGATGGTTTCCTTGTCAACTATCAAGAATCCCAATCTGTGATTCATAATTTGT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CCA 90 bp GGGAGGGATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCCCAGCACCCAAGGTCTaGCCTGGAAGAGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: GRDLASGVGGINLSSSAGPAPKV*PGRGGG
Trigger: GCCCCCACCTCTTCCAGGCCAGACCTTGGGTGCTGG...GCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATCCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GGGAGGGATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTGTGCGCCTGCCATCTaGGGACCAGAGTTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GRDLASGVGGINLSSSAGCAPAI*GPELAC
Trigger: GCAGGCCAACTCTGGTCCCCAGATGGCAGGCGCACA...GCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATCCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GGGAGGGATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCACCCAAGGTCTGGCCTaGAAGAGGTGGGGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: GRDLASGVGGINLSSSAGTQGLA*KRWGLV
Trigger: TACCAGCCCCCACCTCTTCCAGGCCAGACCTTGGGT...GCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATCCCTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GGGAGGGATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCGGAAGAGGTGGGGGCTaGTACTGGGCATTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: GRDLASGVGGINLSSSAGGRGGG*YWAFGG
Trigger: TCCTCCAAATGCCCAGTACCAGCCCCCACCTCTTCC...GCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATCCCTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR TCA 90 bp GAAGCCTCCTGGGTAAGACAGTTGTGCGCCTGCCATCTGGGGACCAGAGTTGGCCAGCTGGGTGACAGATaGAGTGGATATAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: EASWVRQLCACHLGTRVGQLGDR*SGYRTW
Trigger: CCAGGTCCTATATCCACTTCATCTGTCACCCAGCTG...GCCAACTCTGGTCCCCAGATGGCAGGCGCACAACTGTCTTACCCAGGAGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR GCA 90 bp GTGTCACAGAGCAGCCGTGAGCCACGCAGTCCTTGGCCAATGAGTCATAGACATCCAGAGTTGGCCTGCTaGGGAGGATATCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: VSQSSREPRSPWPMSHRHPELAC*GGYPAP
Trigger: GGGTGCTGGATATCCTCCGCAGCAGGCCAACTCTGG...ATGTCTATGACTCATTGGCCAAGGACTGCGTGGCTCACGGCTGCTCTGTGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR GCA 90 bp GAGGGTGACCAGTGGCATGAGCTCCATTCTGACCAAACTGATGGGGTCCAGGAGTGGGTAAGACAGTTGTaGGCCTGCCATCTGGGGACC +
Preference number: 4 (lower is better)
Translates to: EGDQWHELHSDQTDGVQEWVRQL*ACHLGT
Trigger: GGTCCCCAGATGGCAGGCGCACAACTGTCTTACCCA...CTCCTGGACCCCATCAGTTTGGTCAGAATGGAGCTCATGCCACTGGTCACCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CCA 90 bp GATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCGGTGGGGGCTGGTACTaGGCATTTGGAGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: DLASGVGGINLSSSAGSIGGGWY*AFGGGG
Trigger: GCCTCCTCCTCCAAATGCCCAGTACCAGCCCCCACC...GATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCGGATCCAGCTTCTTCTaGGGCTGTGGCGGACCAGCC +
Preference number: 4 (lower is better)
Translates to: DLASGVGGINLSSSAGSIGSSFF*GCGGPA
Trigger: GGCTGGTCCGCCACAGCCCCAGAAGAAGCTGGATCC...GATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GAAGCCTCCTGGGTAAGACAGTTGTGCGCCTGCCATCTGGGGACCAGAGTTGGCGCAACGTCCACCTCCTaGGTTCAAGCTATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: EASWVRQLCACHLGTRVGATSTS*VQAILL
Trigger: CAGGAGAATAGCTTGAACCCAGGAGGTGGACGTTGC...GCCAACTCTGGTCCCCAGATGGCAGGCGCACAACTGTCTTACCCAGGAGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR TCA 90 bp GATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCAGGCACCAGGACCATTaGGTGTGGTGGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: DLASGVGGINLSSSAGSIRHQDH*VWWVVV
Trigger: CACCACCACCCACCACACTCAATGGTCCTGGTGCCT...GATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR TCA 90 bp GGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGGGGCCCTCACCAGCCGTaGGGCTTGGTCCGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: GINLSSSAGSIILNHLDWGPHQP*GLVRSL
Trigger: GAGACTCCGGACCAAGCCTCACGGCTGGTGAGGGCC...CCAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp ATTTTGGTCACCTTTCTAAGAAAGCTGGGGGCTTGGGTGAAGACATCTGAGGAGGGGCCAGGGGGTCCCTaGCTTGGAGGAGCCATGCCT +
Preference number: 4 (lower is better)
Translates to: ILVTFLRKLGAWVKTSEEGPGGP*LGGAMP
Trigger: AGGCATGGCTCCTCCAAGCCAGGGACCCCCTGGCCC...CTCCTCAGATGTCTTCACCCAAGCCCCCAGCTTTCTTAGAAAGGTGACCAAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS-3UTR TCA 90 bp GGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGGGTCACAGAGCAGCCGTaGGCCACGCAGTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GINLSSSAGSIILNHLDWVTEQP*ATQSLA
Trigger: GGCCAAGGACTGCGTGGCTCACGGCTGCTCTGTGAC...CCAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR TCA 90 bp TGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGCCCTCACCAGCCGTaGGGCTTGGTCCGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: CWWHKLVLLCWLYHSQSPGPHQP*GLVRSL
Trigger: GAGACTCCGGACCAAGCCTCACGGCTGGTGAGGGCC...AGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp TCTGACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCAGGGCCAGGGGGTCCCTaGCTTGGAGGAGCCATGCCT +
Preference number: 4 (lower is better)
Translates to: SDVHGKQYVVQRMNRGLAGPGGP*LGGAMP
Trigger: AGGCATGGCTCCTCCAAGCCAGGGACCCCCTGGCCC...TGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCCTGGTACTGGGCATTTaGAGGAGGAGGCCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: DLASGVGGINLSSSAGSILVLGI*RRRPRE
Trigger: CTCTCTGGGCCTCCTCCTCCAAATGCCCAGTACCAG...GATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTACCCAAGGTCTGGCCTaGAAGAGGTGGGGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: GLWCWWHKLVLLCWLYHSTQGLA*KRWGLV
Trigger: TACCAGCCCCCACCTCTTCCAGGCCAGACCTTGGGT...AGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCTCCAGGGAAGCCTCCTaGGTAAGACAGTTGTGCGCC +
Preference number: 4 (lower is better)
Translates to: DLASGVGGINLSSSAGSISREAS*VRQLCA
Trigger: GGCGCACAACTGTCTTACCCAGGAGGCTTCCCTGGA...GATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCACCAGCCGTGAGGCTTaGTCCGGAGTCTCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: DLASGVGGINLSSSAGSITSREA*SGVSVF
Trigger: GAAGACTGAGACTCCGGACCAAGCCTCACGGCTGGT...GATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
3UTR CAA 72 bp GAGGGTTGGTATGGTGCATGTGAGGATGCCACATTGTaGACAGGTGGAGGGCCTGGAAATCTTTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: EGWYGACEDATL*TGGGPGNLWGG
Trigger: CCCTCCCCAAAGATTTCCAGGCCCTCCACCTGTCAACAATGTGGCATCCTCACATGCACCATACCAACCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CCA 90 bp GATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCCCCCAAAGGCCCTGCTaGCTTCATCATACCTGTTGG +
Preference number: 4 (lower is better)
Translates to: DLASGVGGINLSSSAGSIPQRPC*LHHTCW
Trigger: CCAACAGGTATGATGAAGCCAGCAGGGCCTTTGGGG...GATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000506622.5
ENST00000509818.5
CDS-3UTR CCA 90 bp GGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATATGGGGTCCAGGAGGTaGGGGACCCGGAGGCAACAT +
Preference number: 4 (lower is better)
Translates to: GGINLSSSAGSIILNHLDMGSRR*GTRRQH
Trigger: ATGTTGCCTCCGGGTCCCCCACCTCCTGGACCCCAT...ATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTGGGCCAGGGGGTCCCTaGCTTGGAGGAGCCATGCCT +
Preference number: 4 (lower is better)
Translates to: GKQYVVQRMNRGLAFPWSGPGGP*LGGAMP
Trigger: AGGCATGGCTCCTCCAAGCCAGGGACCCCCTGGCCC...AGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCTGGTACTGGGCATTTaGAGGAGGAGGCCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GLWCWWHKLVLLCWLYHSLVLGI*RRRPRE
Trigger: CTCTCTGGGCCTCCTCCTCCAAATGCCCAGTACCAG...AGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GGGAGGGATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCCTTGATGGTCTTGCTTaGGTCAAGGAAACTTTGGGC +
Preference number: 4 (lower is better)
Translates to: GRDLASGVGGINLSSSAGLDGLA*VKETLG
Trigger: GCCCAAAGTTTCCTTGACCCAAGCAAGACCATCAAG...GCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATCCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
3UTR CAA 72 bp GCAGAGGGTTGGTATGGTGCATGTGAGGATGCCACATaGTTGACAGGTGGAGGGCCTGGAAATCTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: AEGWYGACEDAT*LTGGGPGNLWG
Trigger: TCCCCAAAGATTTCCAGGCCCTCCACCTGTCAACAATGTGGCATCCTCACATGCACCATACCAACCCTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR TCA 90 bp ATTTTGGTCACCTTTCTAAGAAAGCTGGGGGCTTGGGTGAAGACATCTGAGGAGAGGCACCAGGACCATTaGGTGTGGTGGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: ILVTFLRKLGAWVKTSEERHQDH*VWWVVV
Trigger: CACCACCACCCACCACACTCAATGGTCCTGGTGCCT...CTCCTCAGATGTCTTCACCCAAGCCCCCAGCTTTCTTAGAAAGGTGACCAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS-3UTR TCA 90 bp GTGTCACAGAGCAGCCGTGAGCCACGCAGTCCTTGGCCAATGAGTCATAGACATGCCACGTCCACATACTaGCTAGGAAAGAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: VSQSSREPRSPWPMSHRHATSTY*LGKRKS
Trigger: ACTCTTCCTCTTTCCTAGTCAGTATGTGGACGTGGC...ATGTCTATGACTCATTGGCCAAGGACTGCGTGGCTCACGGCTGCTCTGTGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR TCA 90 bp AAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTTGGGCCCTCACCAGCCGTaGGGCTTGGTCCGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: KTVCCTTDESRTGISLVLGPHQP*GLVRSL
Trigger: GAGACTCCGGACCAAGCCTCACGGCTGGTGAGGGCC...CAAGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR TCA 90 bp GATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCGAAGTCTTGTTCCTGTaGTTGAGTCCCTGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: DLASGVGGINLSSSAGSIEVLFL*LSPWPS
Trigger: TGAGGGCCAGGGACTCAATCACAGGAACAAGACTTC...GATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp GGGAGGGATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCAAAACCCACTCGAATTaGAGACGTCTCTTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: GRDLASGVGGINLSSSAGKTHSN*RRLFLL
Trigger: GAGCAAGAAGAGACGTCTGCAATTCGAGTGGGTTTT...GCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATCCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp GGGAGGGATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCAGGACTTTGTCCAAATaGTTTGGGAGAAGCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GRDLASGVGGINLSSSAGRTLSK*FGRSLC
Trigger: ACAGAGGCTTCTCCCAAAGCATTTGGACAAAGTCCT...GCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATCCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS-3UTR CCA 90 bp GGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCCCCAAAGGCCCTGCTaGCTTCATCATACCTGTTGG +
Preference number: 4 (lower is better)
Translates to: GLWCWWHKLVLLCWLYHSPQRPC*LHHTCW
Trigger: CCAACAGGTATGATGAAGCCAGCAGGGCCTTTGGGG...AGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506622.5
ENST00000509818.5
CDS-3UTR CCA 90 bp TCTGACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCAATGGGGTCCAGGAGGTaGGGGACCCGGAGGCAACAT +
Preference number: 4 (lower is better)
Translates to: SDVHGKQYVVQRMNRGLAMGSRR*GTRRQH
Trigger: ATGTTGCCTCCGGGTCCCCCACCTCCTGGACCCCAT...TGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp TGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGGGTGGGGGCTGGTACTaGGCATTTGGAGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: WHKLVLLCWLYHSQSPGLGGGWY*AFGGGG
Trigger: GCCTCCTCCTCCAAATGCCCAGTACCAGCCCCCACC...CAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGGACCCAAGGTCTGGCCTaGAAGAGGTGGGGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: GINLSSSAGSIILNHLDWTQGLA*KRWGLV
Trigger: TACCAGCCCCCACCTCTTCCAGGCCAGACCTTGGGT...CCAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp TGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCCCAGCACCCAAGGTCTaGCCTGGAAGAGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: WKTVCCTTDESRTGISLVPAPKV*PGRGGG
Trigger: GCCCCCACCTCTTCCAGGCCAGACCTTGGGTGCTGG...GACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GAGGGTGACCAGTGGCATGAGCTCCATTCTGACCAAACTGATGGGGTCCAGGAGCATGAAGATAAAGGCTaGTGGGTTGGGAGGCTTACT +
Preference number: 4 (lower is better)
Translates to: EGDQWHELHSDQTDGVQEHEDKG*WVGRLT
Trigger: AGTAAGCCTCCCAACCCACCAGCCTTTATCTTCATG...CTCCTGGACCCCATCAGTTTGGTCAGAATGGAGCTCATGCCACTGGTCACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CCA 90 bp GGGAGGGATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCGTTTTTCTCTTCCTaGAAGTGGCTGGGCCTTTTA +
Preference number: 4 (lower is better)
Translates to: GRDLASGVGGINLSSSAGSFFSS*KWLGLL
Trigger: TAAAAGGCCCAGCCACTTCCAGGAAGAGAAAAACGA...GCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATCCCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS-3UTR TCA 90 bp GGGAGGGATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTTGCTTAGCCATATCTaGCGTGCATGGAAAACAGTA +
Preference number: 4 (lower is better)
Translates to: GRDLASGVGGINLSSSAGLLSHI*RAWKTV
Trigger: TACTGTTTTCCATGCACGTCAGATATGGCTAAGCAA...GCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATCCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR TCA 90 bp CTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATGTTCCTCCAGTGAGCTaGGGAACCAGCCCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: LVSHSGPVFFQCGPDVGNVPPVS*GTSPSE
Trigger: CTCGCTGGGGCTGGTTCCTCAGCTCACTGGAGGAAC...ATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR TCA 90 bp GGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTGTTTGTCATCGTGCTTaGACTCCACGGTCACTGCCT +
Preference number: 4 (lower is better)
Translates to: GLWCWWHKLVLLCWLYHSVCHRA*TPRSLP
Trigger: AGGCAGTGACCGTGGAGTTCAAGCACGATGACAAAC...AGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR GCA 90 bp GGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTGGTCGTGGAGGAGTCTaGAATGATGTGGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: GLWCWWHKLVLLCWLYHSGRGGV*NDVADR
Trigger: TCTGTCAGCCACATCATTGCAGACTCCTCCACGACC...AGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp TCTGACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCACCAGAGTTGGCCTGCTaGGGAGGATATCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: SDVHGKQYVVQRMNRGLAPELAC*GGYPAP
Trigger: GGGTGCTGGATATCCTCCGCAGCAGGCCAACTCTGG...TGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp TGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGCCAGAGTTGGCCTGCTaGGGAGGATATCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: WHKLVLLCWLYHSQSPGLPELAC*GGYPAP
Trigger: GGGTGCTGGATATCCTCCGCAGCAGGCCAACTCTGG...CAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp GGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATGGACCAGAGTTGGCCTaGTGCGGAGGATATCCAGCA +
Preference number: 4 (lower is better)
Translates to: GGINLSSSAGSIILNHLDGPELA*CGGYPA
Trigger: TGCTGGATATCCTCCGCAGCAGGCCAACTCTGGTCC...ATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp CACTCTCGCCGTGATTTACCAAGTAAAGGGGACTCTCATTTGAAGGAATGGTGGTGGGTAAGACAGTTGTaGGCCTGCCATCTGGGGACC +
Preference number: 4 (lower is better)
Translates to: HSRRDLPSKGDSHLKEWWWVRQL*ACHLGT
Trigger: GGTCCCCAGATGGCAGGCGCACAACTGTCTTACCCA...CCACCATTCCTTCAAATGAGAGTCCCCTTTACTTGGTAAATCACGGCGAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp GGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTCGGACCAGCCATCTGTaGAGGACCTCCAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: GKQYVVQRMNRGLAFPWSRTSHL*RTSREA
Trigger: GGCTTCCCTGGAGGTCCTGCACAGATGGCTGGTCCG...AGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp GATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCTTTGAGCTTCCCTGGTaGTTCAGCAGTTGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: DLASGVGGINLSSSAGSIFELPW*FSSWQG
Trigger: TCCTTGCCAACTGCTGAAGCACCAGGGAAGCTCAAA...GATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR GCA 90 bp GGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTGGCTTGGAGGAGCCATaGCTGAACAGGATATACAGC +
Preference number: 4 (lower is better)
Translates to: GLWCWWHKLVLLCWLYHSGLEEP*LNRIYS
Trigger: GCTGTATATCCTGTTCAGGCATGGCTCCTCCAAGCC...AGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506622.5
CDS-3UTR CCA 90 bp GGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGGGGAAGAGGTGGGGGCTaGTACTGGGCATTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: GINLSSSAGSIILNHLDWGRGGG*YWAFGG
Trigger: TCCTCCAAATGCCCAGTACCAGCCCCCACCTCTTCC...CCAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTTGTGCGCCTGCCATCTaGGGACCAGAGTTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GKQYVVQRMNRGLAFPWSCAPAI*GPELAC
Trigger: GCAGGCCAACTCTGGTCCCCAGATGGCAGGCGCACA...AGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp ATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGGGCTCTTCTTCTGGGGCTGTaGCGGACCAGCCATCTGTGC +
Preference number: 4 (lower is better)
Translates to: INLSSSAGSIILNHLDWALLLGL*RTSHLC
Trigger: GCACAGATGGCTGGTCCGCCACAGCCCCAGAAGAAG...AGCCCAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GGGAGGGATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCGGACTGGCATTTCCTTaGTCTTGTATCATGCAATCT +
Preference number: 4 (lower is better)
Translates to: GRDLASGVGGINLSSSAGGLAFP*SCIMQS
Trigger: AGATTGCATGATACAAGACCAAGGAAATGCCAGTCC...GCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATCCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp CACTCTCGCCGTGATTTACCAAGTAAAGGGGACTCTCATTTGAAGGAATGGTGGACCAGCCGTGAGGCTTaGTCCGGAGTCTCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: HSRRDLPSKGDSHLKEWWTSREA*SGVSVF
Trigger: GAAGACTGAGACTCCGGACCAAGCCTCACGGCTGGT...CCACCATTCCTTCAAATGAGAGTCCCCTTTACTTGGTAAATCACGGCGAGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR TCA 90 bp GGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATGTCACCACCATCATCTaGGGCTGGGCCAGATTACTC +
Preference number: 4 (lower is better)
Translates to: GGINLSSSAGSIILNHLDVTTII*GWARLL
Trigger: GAGTAATCTGGCCCAGCCTCAGATGATGGTGGTGAC...ATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR TCA 90 bp CACTCTCGCCGTGATTTACCAAGTAAAGGGGACTCTCATTTGAAGGAATGGTGGGTCACCACCATCATCTaGGGCTGGGCCAGATTACTC +
Preference number: 4 (lower is better)
Translates to: HSRRDLPSKGDSHLKEWWVTTII*GWARLL
Trigger: GAGTAATCTGGCCCAGCCTCAGATGATGGTGGTGAC...CCACCATTCCTTCAAATGAGAGTCCCCTTTACTTGGTAAATCACGGCGAGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR TCA 90 bp GGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTAGTCTCAGTCTTCCTTaGTCTGACCCATCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: GLWCWWHKLVLLCWLYHSSLSLP*SDPSCC
Trigger: GCAACAGGATGGGTCAGATCAAGGAAGACTGAGACT...AGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR TCA 90 bp GACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTAGCTGGGGGCTTGGGTaGAGACATCTGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: DVHGKQYVVQRMNRGLAFSWGLG*RHLRSW
Trigger: CCAGCTCCTCAGATGTCTTCACCCAAGCCCCCAGCT...AAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS-3UTR GCA 90 bp GGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGGCATACCTGTTGGAGATaGTGTGTGCGACGGATCCCC +
Preference number: 4 (lower is better)
Translates to: GINLSSSAGSIILNHLDWHTCWR*CVRRIP
Trigger: GGGGATCCGTCGCACACAGCATCTCCAACAGGTATG...CCAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS-3UTR GCA 90 bp AAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTTGCGGACCAGCCATCTGTaGAGGACCTCCAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: KTVCCTTDESRTGISLVLRTSHL*RTSREA
Trigger: GGCTTCCCTGGAGGTCCTGCACAGATGGCTGGTCCG...CAAGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp CTTGCACCTGTTGCATCTGACTGGTCCACTCTCGCCGTGATTTACCAAGTAAAGTCTGACCCATCCTGTTaGCACCTGAGCTTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LAPVASDWSTLAVIYQVKSDPSC*HLSLAS
Trigger: AGAGGCTAAGCTCAGGTGGCAACAGGATGGGTCAGA...CTTTACTTGGTAAATCACGGCGAGAGTGGACCAGTCAGATGCAACAGGTGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTGTGCCCATAATGAGGTaGAGAAAGGCCTATTCCAGG +
Preference number: 4 (lower is better)
Translates to: GLWCWWHKLVLLCWLYHSVPIMR*RKAYSR
Trigger: CCTGGAATAGGCCTTTCTCCACCTCATTATGGGCAC...AGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp TGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGCTGGTACTGGGCATTTaGAGGAGGAGGCCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: WHKLVLLCWLYHSQSPGLLVLGI*RRRPRE
Trigger: CTCTCTGGGCCTCCTCCTCCAAATGCCCAGTACCAG...CAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp AAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTTGGGTGGGGGCTGGTACTaGGCATTTGGAGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: KTVCCTTDESRTGISLVLGGGWY*AFGGGG
Trigger: GCCTCCTCCTCCAAATGCCCAGTACCAGCCCCCACC...CAAGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp AAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTTGTGTGCGCCTGCCATCTaGGGACCAGAGTTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: KTVCCTTDESRTGISLVLCAPAI*GPELAC
Trigger: GCAGGCCAACTCTGGTCCCCAGATGGCAGGCGCACA...CAAGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTCTTCTTCTGGGGCTGTaGCGGACCAGCCATCTGTGC +
Preference number: 4 (lower is better)
Translates to: GKQYVVQRMNRGLAFPWSLLLGL*RTSHLC
Trigger: GCACAGATGGCTGGTCCGCCACAGCCCCAGAAGAAG...AGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATAGAGGATCCAGCTTCTTCTaGGGCTGTGGCGGACCAGCC +
Preference number: 4 (lower is better)
Translates to: VSHSGPVFFQCGPDVGNRGSSFF*GCGGPA
Trigger: GGCTGGTCCGCCACAGCCCCAGAAGAAGCTGGATCC...TCTATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp CTTGCACCTGTTGCATCTGACTGGTCCACTCTCGCCGTGATTTACCAAGTAAAGGGCCTCTGGTGTTGGTaGCATAAACTTGTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LAPVASDWSTLAVIYQVKGLWCW*HKLVLL
Trigger: GAGGAGGACAAGTTTATGCCACCAACACCAGAGGCC...CTTTACTTGGTAAATCACGGCGAGAGTGGACCAGTCAGATGCAACAGGTGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTGAGGGATCTGGCCTCTaGTGTTGGTGGCATAAACTT +
Preference number: 4 (lower is better)
Translates to: GLWCWWHKLVLLCWLYHSEGSGL*CWWHKL
Trigger: AAGTTTATGCCACCAACACCAGAGGCCAGATCCCTC...AGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGGAGCTGGTGGGCTCGCTaGAGGACTTTGTCCAAATGC +
Preference number: 4 (lower is better)
Translates to: GINLSSSAGSIILNHLDWSWWAR*RTLSKC
Trigger: GCATTTGGACAAAGTCCTCCAGCGAGCCCACCAGCT...CCAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS-3UTR CCA 90 bp CTTGCACCTGTTGCATCTGACTGGTCCACTCTCGCCGTGATTTACCAAGTAAAGAGAAAGCTGGGGGCTTaGGTGAAGACATCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LAPVASDWSTLAVIYQVKRKLGA*VKTSEE
Trigger: CTCCTCAGATGTCTTCACCCAAGCCCCCAGCTTTCT...CTTTACTTGGTAAATCACGGCGAGAGTGGACCAGTCAGATGCAACAGGTGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS-3UTR TCA 90 bp GATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCGTCTTCTTTGACCACTaGTTGTCGTGTAAAGCACAG +
Preference number: 4 (lower is better)
Translates to: DLASGVGGINLSSSAGSIVFFDH*LSCKAQ
Trigger: CTGTGCTTTACACGACAATCAGTGGTCAAAGAAGAC...GATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR TCA 90 bp GTGTCACAGAGCAGCCGTGAGCCACGCAGTCCTTGGCCAATGAGTCATAGACATAACATATGGGCAGTCTaGTTAACTAGAATTTCCCGG +
Preference number: 4 (lower is better)
Translates to: VSQSSREPRSPWPMSHRHNIWAV*LTRISR
Trigger: CCGGGAAATTCTAGTTAATCAGACTGCCCATATGTT...ATGTCTATGACTCATTGGCCAAGGACTGCGTGGCTCACGGCTGCTCTGTGACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR TCA 90 bp TCTGACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATCTTGTTCCTGTGATTaGGTCCCTGGCCCTCACCAG +
Preference number: 4 (lower is better)
Translates to: SDVHGKQYVVQRMNRGLASCSCD*VPGPHQ
Trigger: CTGGTGAGGGCCAGGGACTCAATCACAGGAACAAGA...TGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR TCA 90 bp TGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGTCTTGTTCCTGTGATTaGGTCCCTGGCCCTCACCAG +
Preference number: 4 (lower is better)
Translates to: WHKLVLLCWLYHSQSPGLSCSCD*VPGPHQ
Trigger: CTGGTGAGGGCCAGGGACTCAATCACAGGAACAAGA...CAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR TCA 90 bp CACTCTCGCCGTGATTTACCAAGTAAAGGGGACTCTCATTTGAAGGAATGGTGGGAAGTCTTGTTCCTGTaGTTGAGTCCCTGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: HSRRDLPSKGDSHLKEWWEVLFL*LSPWPS
Trigger: TGAGGGCCAGGGACTCAATCACAGGAACAAGACTTC...CCACCATTCCTTCAAATGAGAGTCCCCTTTACTTGGTAAATCACGGCGAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR TCA 90 bp GGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTTGGAGGAGCCATGCCTaGACAGGATATACAGCATTT +
Preference number: 4 (lower is better)
Translates to: GLWCWWHKLVLLCWLYHSWRSHA*TGYTAF
Trigger: AAATGCTGTATATCCTGTTCAGGCATGGCTCCTCCA...AGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506622.5
CDS-3UTR TCA 90 bp GACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTGGCCTTTTAAGGCCCTaGGCCGACACTTTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: DVHGKQYVVQRMNRGLAFGLLRP*ADTLGR
Trigger: CCTACCCAAAGTGTCGGCTCAGGGCCTTAAAAGGCC...AAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS-3UTR GCA 90 bp GGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATGGTCGTGGAGGAGTCTaGAATGATGTGGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: GGINLSSSAGSIILNHLDGRGGV*NDVADR
Trigger: TCTGTCAGCCACATCATTGCAGACTCCTCCACGACC...ATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp TGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCGGACCAGAGTTGGCCTaGTGCGGAGGATATCCAGCA +
Preference number: 4 (lower is better)
Translates to: WKTVCCTTDESRTGISLVGPELA*CGGYPA
Trigger: TGCTGGATATCCTCCGCAGCAGGCCAACTCTGGTCC...GACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp CTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATGGACCAGAGTTGGCCTaGTGCGGAGGATATCCAGCA +
Preference number: 4 (lower is better)
Translates to: LVSHSGPVFFQCGPDVGNGPELA*CGGYPA
Trigger: TGCTGGATATCCTCCGCAGCAGGCCAACTCTGGTCC...ATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp TGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTGGGTAAGACAGTTGTaGGCCTGCCATCTGGGGACC +
Preference number: 4 (lower is better)
Translates to: WKTVCCTTDESRTGISLVWVRQL*ACHLGT
Trigger: GGTCCCCAGATGGCAGGCGCACAACTGTCTTACCCA...GACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp TCTATCCAAGTGCATCTGGAAATTGTTGTATTTGTAAAGGGTTCCTCCAGTGAGATGGGGTCCAGGAGGTaGGGGACCCGGAGGCAACAT +
Preference number: 4 (lower is better)
Translates to: SIQVHLEIVVFVKGSSSEMGSRR*GTRRQH
Trigger: ATGTTGCCTCCGGGTCCCCCACCTCCTGGACCCCAT...CTCACTGGAGGAACCCTTTACAAATACAACAATTTCCAGATGCACTTGGATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CCA 90 bp CTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATGGGGAGGGTGACCAGTaGCATGAGCTCCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: LVSHSGPVFFQCGPDVGNGEGDQ*HELHSD
Trigger: GTCAGAATGGAGCTCATGCCACTGGTCACCCTCCCC...ATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTGGGGAGGGTGACCAGTaGCATGAGCTCCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: GKQYVVQRMNRGLAFPWSGEGDQ*HELHSD
Trigger: GTCAGAATGGAGCTCATGCCACTGGTCACCCTCCCC...AGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTGACAGGTGGAGGGCCTaGAAATCTTTGGGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: DVHGKQYVVQRMNRGLAFDRWRA*KSLGRV
Trigger: CACCCTCCCCAAAGATTTCCAGGCCCTCCACCTGTC...AAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506622.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTGACAGGTGGAGGGCCTaGAAATCTTTGGGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: GKQYVVQRMNRGLAFPWSDRWRA*KSLGRV
Trigger: CACCCTCCCCAAAGATTTCCAGGCCCTCCACCTGTC...AGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506622.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCACATTGTTGACAGGTaGAGGGCCTGGAAATCTTTG +
Preference number: 4 (lower is better)
Translates to: GLWCWWHKLVLLCWLYHSHIVDR*RAWKSL
Trigger: CAAAGATTTCCAGGCCCTCCACCTGTCAACAATGTG...AGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506622.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTGGAAGAGGTGGGGGCTaGTACTGGGCATTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: GKQYVVQRMNRGLAFPWSGRGGG*YWAFGG
Trigger: TCCTCCAAATGCCCAGTACCAGCCCCCACCTCTTCC...AGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTTCTGGGGACCAGAGTTaGCCTGCTGCGGAGGATATC +
Preference number: 4 (lower is better)
Translates to: DVHGKQYVVQRMNRGLAFSGDQS*PAAEDI
Trigger: GATATCCTCCGCAGCAGGCCAACTCTGGTCCCCAGA...AAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp TGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTCTGGGGACCAGAGTTaGCCTGCTGCGGAGGATATC +
Preference number: 4 (lower is better)
Translates to: WKTVCCTTDESRTGISLVSGDQS*PAAEDI
Trigger: GATATCCTCCGCAGCAGGCCAACTCTGGTCCCCAGA...GACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp AAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTTGCTTCTTCTGGGGCTGTaGCGGACCAGCCATCTGTGC +
Preference number: 4 (lower is better)
Translates to: KTVCCTTDESRTGISLVLLLLGL*RTSHLC
Trigger: GCACAGATGGCTGGTCCGCCACAGCCCCAGAAGAAG...CAAGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp CTTGCACCTGTTGCATCTGACTGGTCCACTCTCGCCGTGATTTACCAAGTAAAGCTCAATCACCTGGATTaGGCTAGGGATAGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: LAPVASDWSTLAVIYQVKLNHLD*ARDRVR
Trigger: CCTGACTCTATCCCTAGCCCAATCCAGGTGATTGAG...CTTTACTTGGTAAATCACGGCGAGAGTGGACCAGTCAGATGCAACAGGTGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp CTTGCACCTGTTGCATCTGACTGGTCCACTCTCGCCGTGATTTACCAAGTAAAGGAGCCACGCAGTCCTTaGCCAATGAGTCATAGACAT +
Preference number: 4 (lower is better)
Translates to: LAPVASDWSTLAVIYQVKEPRSP*PMSHRH
Trigger: ATGTCTATGACTCATTGGCCAAGGACTGCGTGGCTC...CTTTACTTGGTAAATCACGGCGAGAGTGGACCAGTCAGATGCAACAGGTGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CCA 90 bp GACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTACCAGCCGTGAGGCTTaGTCCGGAGTCTCAGTCTTC +
Preference number: 4 (lower is better)
Translates to: DVHGKQYVVQRMNRGLAFTSREA*SGVSVF
Trigger: GAAGACTGAGACTCCGGACCAAGCCTCACGGCTGGT...AAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTCATCTGAGGAGCTGGTaGGCTCGCTGGAGGACTTTG +
Preference number: 4 (lower is better)
Translates to: GKQYVVQRMNRGLAFPWSHLRSW*ARWRTL
Trigger: CAAAGTCCTCCAGCGAGCCCACCAGCTCCTCAGATG...AGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS-3UTR CCA 90 bp GGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTAGACATCTGAGGAGCTaGTGGGCTCGCTGGAGGACT +
Preference number: 4 (lower is better)
Translates to: GKQYVVQRMNRGLAFPWSRHLRS*WARWRT
Trigger: AGTCCTCCAGCGAGCCCACCAGCTCCTCAGATGTCT...AGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509818.5
3UTR CAA 72 bp AAGGCTCCACTGTCTTCACTGAGTTTGTCATCGTGCTaGAACTCCACGGTCACTGCCTTGTCACAATCGATG +
Preference number: 4 (lower is better)
Translates to: KAPLSSLSLSSC*NSTVTALSQSM
Trigger: CATCGATTGTGACAAGGCAGTGACCGTGGAGTTCAAGCACGATGACAAACTCAGTGAAGACAGTGGAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR TCA 90 bp GGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTAGGATGCCACATTGTTaGCAGGTGGAGGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: GKQYVVQRMNRGLAFPWSRMPHC*QVEGLE
Trigger: TTCCAGGCCCTCCACCTGTCAACAATGTGGCATCCT...AGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506622.5
ENST00000514561.5
CDS-3UTR TCA 90 bp CTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATAGGATGCCACATTGTTaGCAGGTGGAGGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: LVSHSGPVFFQCGPDVGNRMPHC*QVEGLE
Trigger: TTCCAGGCCCTCCACCTGTCAACAATGTGGCATCCT...ATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR TCA 90 bp GGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGGGGTGGTGGAAGAACTTaGGATCCAGGCTGCAAAATG +
Preference number: 4 (lower is better)
Translates to: GINLSSSAGSIILNHLDWGGGRT*DPGCKM
Trigger: CATTTTGCAGCCTGGATCTCAAGTTCTTCCACCACC...CCAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR TCA 90 bp GTTATATGTGATAAAACCCACTCGAATTGCAGACGTCTCTTCTTGCTCTTCCTTAGGCACCAGGACCATTaGGTGTGGTGGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VICDKTHSNCRRLFLLFLRHQDH*VWWVVV
Trigger: CACCACCACCCACCACACTCAATGGTCCTGGTGCCT...AAGGAAGAGCAAGAAGAGACGTCTGCAATTCGAGTGGGTTTTATCACATATAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR TCA 90 bp GGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTGCAGCTAATGGAATCTaGGCTTGCTTAGCCATATCT +
Preference number: 4 (lower is better)
Translates to: GLWCWWHKLVLLCWLYHSAANGI*ACLAIS
Trigger: AGATATGGCTAAGCAAGCTCAGATTCCATTAGCTGC...AGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR TCA 90 bp CACTCTCGCCGTGATTTACCAAGTAAAGGGGACTCTCATTTGAAGGAATGGTGGAAGGGGACTCTCATTTaGAGGAATGGTGGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: HSRRDLPSKGDSHLKEWWKGTLI*RNGGKG
Trigger: CCCTTTGCCACCATTCCTTCAAATGAGAGTCCCCTT...CCACCATTCCTTCAAATGAGAGTCCCCTTTACTTGGTAAATCACGGCGAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR TCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATGTCACAGAGCAGCCGTaGGCCACGCAGTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHVTEQP*ATQSLA
Trigger: GGCCAAGGACTGCGTGGCTCACGGCTGCTCTGTGAC...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp CACTCTCGCCGTGATTTACCAAGTAAAGGGGACTCTCATTTGAAGGAATGGTGGCTAGAATTTCCCGGATaGCCTTCAAAGGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: HSRRDLPSKGDSHLKEWWLEFPG*PSKAGG
Trigger: TCCACCAGCCTTTGAAGGTCATCCGGGAAATTCTAG...CCACCATTCCTTCAAATGAGAGTCCCCTTTACTTGGTAAATCACGGCGAGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR TCA 90 bp GGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGGAGTCTCAGTCTTCCTTaGTCTGACCCATCCTGTTGC +
Preference number: 4 (lower is better)
Translates to: GINLSSSAGSIILNHLDWSLSLP*SDPSCC
Trigger: GCAACAGGATGGGTCAGATCAAGGAAGACTGAGACT...CCAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR TCA 90 bp GAGGGTGACCAGTGGCATGAGCTCCATTCTGACCAAACTGATGGGGTCCAGGAGTACTTATTAGTTGTATaGACCTGGGCAAGAAGCTTA +
Preference number: 4 (lower is better)
Translates to: EGDQWHELHSDQTDGVQEYLLVV*TWARSL
Trigger: TAAGCTTCTTGCCCAGGTTCATACAACTAATAAGTA...CTCCTGGACCCCATCAGTTTGGTCAGAATGGAGCTCATGCCACTGGTCACCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR GCA 90 bp GGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTCATACCTGTTGGAGATaGTGTGTGCGACGGATCCCC +
Preference number: 4 (lower is better)
Translates to: GKQYVVQRMNRGLAFPWSHTCWR*CVRRIP
Trigger: GGGGATCCGTCGCACACAGCATCTCCAACAGGTATG...AGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506622.5
ENST00000509818.5
CDS-3UTR GCA 90 bp GGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTTGGATAAGAAGATTGTaGAGAGGGTTGGTATGGTGC +
Preference number: 4 (lower is better)
Translates to: GLWCWWHKLVLLCWLYHSWIRRL*RGLVWC
Trigger: GCACCATACCAACCCTCTGCACAATCTTCTTATCCA...AGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506622.5
ENST00000514561.5
CDS-3UTR GCA 90 bp TGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCAGACAGTTGTGCGCCTaGCATCTGGGGACCAGAGTT +
Preference number: 4 (lower is better)
Translates to: WKTVCCTTDESRTGISLVRQLCA*HLGTRV
Trigger: AACTCTGGTCCCCAGATGGCAGGCGCACAACTGTCT...GACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp CATATTCATAAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCCGGACCAGCCATCTGTaGAGGACCTCCAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: HIHKILEITLVSHSGPVFRTSHL*RTSREA
Trigger: GGCTTCCCTGGAGGTCCTGCACAGATGGCTGGTCCG...GAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTTATGAATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp GATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCAAACTTGTCCTCCTCTaGTGGCTCTATCATTCTCAA +
Preference number: 4 (lower is better)
Translates to: DLASGVGGINLSSSAGSIKLVLL*WLYHSQ
Trigger: TTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTT...GATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp AAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGCTTGGAGGAGCCATaGCTGAACCTTTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: KILEITLVSHSGPVFFQCGLEEP*LNLWGG
Trigger: CCCTCCCCAAAGGTTCAGGCATGGCTCCTCCAAGCC...ACATTGGAAGAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS-3UTR CCA 90 bp ATTTTGGTCACCTTTCTAAGAAAGCTGGGGGCTTGGGTGAAGACATCTGAGGAGGTGCCCATAATGAGGTaGAGAAAGGCCTATTCCAGG +
Preference number: 4 (lower is better)
Translates to: ILVTFLRKLGAWVKTSEEVPIMR*RKAYSR
Trigger: CCTGGAATAGGCCTTTCTCCACCTCATTATGGGCAC...CTCCTCAGATGTCTTCACCCAAGCCCCCAGCTTTCTTAGAAAGGTGACCAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS-3UTR CCA 90 bp AAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTTGGGGGAGGGTGACCAGTaGCATGAGCTCCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: KTVCCTTDESRTGISLVLGEGDQ*HELHSD
Trigger: GTCAGAATGGAGCTCATGCCACTGGTCACCCTCCCC...CAAGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAAGGGCCAGGGGGTCCCTaGCTTGGAGGAGCCATGCCT +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKGPGGP*LGGAMP
Trigger: AGGCATGGCTCCTCCAAGCCAGGGACCCCCTGGCCC...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATCCAGCACCCAAGGTCTaGCCTGGAAGAGGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHPAPKV*PGRGGG
Trigger: GCCCCCACCTCTTCCAGGCCAGACCTTGGGTGCTGG...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp GTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATAGATCCAGGGAAGCCTCCTaGGTAAGACAGTTGTGCGCC +
Preference number: 4 (lower is better)
Translates to: VSHSGPVFFQCGPDVGNRSREAS*VRQLCA
Trigger: GGCGCACAACTGTCTTACCCAGGAGGCTTCCCTGGA...TCTATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTTCATTCTCAATCACCTaGATTGGGCTAGGGATAGAG +
Preference number: 4 (lower is better)
Translates to: GLWCWWHKLVLLCWLYHSSFSIT*IGLGIE
Trigger: CTCTATCCCTAGCCCAATCCAGGTGATTGAGAATGA...AGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp TCTGACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCAGGCCTCTGGTGTTGGTaGCATAAACTTGTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SDVHGKQYVVQRMNRGLAGLWCW*HKLVLL
Trigger: GAGGAGGACAAGTTTATGCCACCAACACCAGAGGCC...TGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCTTTTCACAAGTGAACTaGCTTGCTGCAGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: DLASGVGGINLSSSAGSIFSQVN*LAAEGL
Trigger: AAGTCCTTCTGCAGCAAGCCAGTTCACTTGTGAAAA...GATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CCA 90 bp ATCCATTCTTCTTCCATAGACACCTGGTTGCTTCCTCCTTTTGGCTATTGTGAACACGCTGGAGTCGAGTaGCATGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: IHSSSIDTWLLPPFGYCEHAGVE*HDLGSL
Trigger: CAGTGAGCCGAGATCATGCCACTCGACTCCAGCGTG...TTCACAATAGCCAAAAGGAGGAAGCAACCAGGTGTCTATGGAAGAAGAATGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CCA 90 bp TGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCCCTGAGCCGACACTTTaGGTAGGAGGCCAAAGAGTC +
Preference number: 4 (lower is better)
Translates to: WKTVCCTTDESRTGISLVPEPTL*VGGQRV
Trigger: GACTCTTTGGCCTCCTACCCAAAGTGTCGGCTCAGG...GACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS-3UTR TCA 90 bp GGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTCAGCTGGGTGACAGATaGAGTGGATATAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: GKQYVVQRMNRGLAFPWSQLGDR*SGYRTW
Trigger: CCAGGTCCTATATCCACTTCATCTGTCACCCAGCTG...AGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506622.5
ENST00000514561.5
CDS-3UTR TCA 90 bp CTTGCACCTGTTGCATCTGACTGGTCCACTCTCGCCGTGATTTACCAAGTAAAGATGTTGTACAACGGATaGATCGAGGACTGGCATTTC +
Preference number: 4 (lower is better)
Translates to: LAPVASDWSTLAVIYQVKMLYNG*IEDWHF
Trigger: GAAATGCCAGTCCTCGATTCATCCGTTGTACAACAT...CTTTACTTGGTAAATCACGGCGAGAGTGGACCAGTCAGATGCAACAGGTGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR TCA 90 bp TGGCTGGTGTTCAAACAGCTTTTAGGAAGTGATCCTTCAGTTGCATCTTACAAATGCACCTGTTGCATCTaGCTGGTCCACTCTCGCCGT +
Preference number: 4 (lower is better)
Translates to: WLVFKQLLGSDPSVASYKCTCCI*LVHSRR
Trigger: ACGGCGAGAGTGGACCAGTCAGATGCAACAGGTGCA...TTTGTAAGATGCAACTGAAGGATCACTTCCTAAAAGCTGTTTGAACACCAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR TCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAGTCACAGAGCAGCCGTaGGCCACGCAGTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSVTEQP*ATQSLA
Trigger: GGCCAAGGACTGCGTGGCTCACGGCTGCTCTGTGAC...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGGTTCCTCCAGTGAGCTaGGGAACCAGCCCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWVPPVS*GTSPSE
Trigger: CTCGCTGGGGCTGGTTCCTCAGCTCACTGGAGGAAC...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp AAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTTGTCTTGTTCCTGTGATTaGGTCCCTGGCCCTCACCAG +
Preference number: 4 (lower is better)
Translates to: KTVCCTTDESRTGISLVLSCSCD*VPGPHQ
Trigger: CTGGTGAGGGCCAGGGACTCAATCACAGGAACAAGA...CAAGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR TCA 90 bp GGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTGAAGTCTTGTTCCTGTaGTTGAGTCCCTGGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GKQYVVQRMNRGLAFPWSEVLFL*LSPWPS
Trigger: TGAGGGCCAGGGACTCAATCACAGGAACAAGACTTC...AGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR TCA 90 bp GTGTCACAGAGCAGCCGTGAGCCACGCAGTCCTTGGCCAATGAGTCATAGACATTCCTTTTGGCTATTGTaGATACTGTCTGCAATAATC +
Preference number: 4 (lower is better)
Translates to: VSQSSREPRSPWPMSHRHSFWLL*ILSAII
Trigger: GATTATTGCAGACAGTATTCACAATAGCCAAAAGGA...ATGTCTATGACTCATTGGCCAAGGACTGCGTGGCTCACGGCTGCTCTGTGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR TCA 90 bp GTTATATGTGATAAAACCCACTCGAATTGCAGACGTCTCTTCTTGCTCTTCCTTTTGGGTGAAGACATCTaGGGAGCTGGTGGGCTCGCT +
Preference number: 4 (lower is better)
Translates to: VICDKTHSNCRRLFLLFLLGEDI*GAGGLA
Trigger: AGCGAGCCCACCAGCTCCTCAGATGTCTTCACCCAA...AAGGAAGAGCAAGAAGAGACGTCTGCAATTCGAGTGGGTTTTATCACATATAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS-3UTR GCA 90 bp GACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTGGTCGTGGAGGAGTCTaGAATGATGTGGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: DVHGKQYVVQRMNRGLAFGRGGV*NDVADR
Trigger: TCTGTCAGCCACATCATTGCAGACTCCTCCACGACC...AAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp GTGTCACAGAGCAGCCGTGAGCCACGCAGTCCTTGGCCAATGAGTCATAGACATCATCATTCACACAGTTaGAAAATCCACACTGATATC +
Preference number: 4 (lower is better)
Translates to: VSQSSREPRSPWPMSHRHHHSHS*KIHTDI
Trigger: GATATCAGTGTGGATTTTGCAACTGTGTGAATGATG...ATGTCTATGACTCATTGGCCAAGGACTGCGTGGCTCACGGCTGCTCTGTGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR GCA 90 bp TGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCGAACTCCACGGTCACTaGCTTGTCACAATCGATGGC +
Preference number: 4 (lower is better)
Translates to: WKTVCCTTDESRTGISLVELHGH*LVTIDG
Trigger: GCCATCGATTGTGACAAGGCAGTGACCGTGGAGTTC...GACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR GCA 90 bp GGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTTCTGACCCATCCTGTTaGCACCTGAGCTTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: GKQYVVQRMNRGLAFPWSSDPSC*HLSLAS
Trigger: AGAGGCTAAGCTCAGGTGGCAACAGGATGGGTCAGA...AGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp CTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATTCTGACCCATCCTGTTaGCACCTGAGCTTAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LVSHSGPVFFQCGPDVGNSDPSC*HLSLAS
Trigger: AGAGGCTAAGCTCAGGTGGCAACAGGATGGGTCAGA...ATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp TGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTAGGCATGAGCCACCATaGCCAGCCATATGTCTTAAC +
Preference number: 4 (lower is better)
Translates to: CWWHKLVLLCWLYHSQSPRHEPP*PAICLN
Trigger: GTTAAGACATATGGCTGGGCATGGTGGCTCATGCCT...AGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR GCA 90 bp GTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATAGAGGGATTAGAGGTCCATaGCACCACGCCCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: VSHSGPVFFQCGPDVGNRGIRGP*HHAQLF
Trigger: AAACAGCTGGGCGTGGTGGCATGGACCTCTAATCCC...TCTATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR GCA 90 bp AAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTTGGGCCCCCAAAGGCCCTaGTGGCTTCATCATACCTTT +
Preference number: 4 (lower is better)
Translates to: KTVCCTTDESRTGISLVLGPQRP*WLHHTF
Trigger: AAAGGTATGATGAAGCCAGCAGGGCCTTTGGGGGCC...CAAGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATGCTCGGAGTTGCAGCTaGGCTGGGAACTGCCACGTC +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHARSCS*AGNCHV
Trigger: GACGTGGCAGTTCCCAGCCCAGCTGCAACTCCGAGC...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGATGGGGTCCAGGAGGTaGGGGACCCGGAGGCAACAT +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWMGSRR*GTRRQH
Trigger: ATGTTGCCTCCGGGTCCCCCACCTCCTGGACCCCAT...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp GACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTATCCAGGCTGCAAAATaGAAGGCTGTGGAGGTCGTG +
Preference number: 4 (lower is better)
Translates to: DVHGKQYVVQRMNRGLAFIQAAK*KAVEVV
Trigger: CACGACCTCCACAGCCTTCCATTTTGCAGCCTGGAT...AAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp CATGGTCTTCAGTTCTTCACATATGAGCTTGACAAGTCCATTCTTTATGTTACTGGATCCAGCTTCTTCTaGGGCTGTGGCGGACCAGCC +
Preference number: 4 (lower is better)
Translates to: HGLQFFTYELDKSILYVTGSSFF*GCGGPA
Trigger: GGCTGGTCCGCCACAGCCCCAGAAGAAGCTGGATCC...AGTAACATAAAGAATGGACTTGTCAAGCTCATATGTGAAGAACTGAAGACCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp CTTGCACCTGTTGCATCTGACTGGTCCACTCTCGCCGTGATTTACCAAGTAAAGTCATTCTCAATCACCTaGATTGGGCTAGGGATAGAG +
Preference number: 4 (lower is better)
Translates to: LAPVASDWSTLAVIYQVKSFSIT*IGLGIE
Trigger: CTCTATCCCTAGCCCAATCCAGGTGATTGAGAATGA...CTTTACTTGGTAAATCACGGCGAGAGTGGACCAGTCAGATGCAACAGGTGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTGGCCTCTGGTGTTGGTaGCATAAACTTGTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: DVHGKQYVVQRMNRGLAFGLWCW*HKLVLL
Trigger: GAGGAGGACAAGTTTATGCCACCAACACCAGAGGCC...AAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp CACTCTCGCCGTGATTTACCAAGTAAAGGGGACTCTCATTTGAAGGAATGGTGGCATGAAGATAAAGGCTaGTGGGTTGGGAGGCTTACT +
Preference number: 4 (lower is better)
Translates to: HSRRDLPSKGDSHLKEWWHEDKG*WVGRLT
Trigger: AGTAAGCCTCCCAACCCACCAGCCTTTATCTTCATG...CCACCATTCCTTCAAATGAGAGTCCCCTTTACTTGGTAAATCACGGCGAGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTCTTCCATAGACACCTaGTTGCTTCCTCCTTTTGGC +
Preference number: 4 (lower is better)
Translates to: GGINLSSSAGSIILNHLDSSIDT*LLPPFG
Trigger: GCCAAAAGGAGGAAGCAACCAGGTGTCTATGGAAGA...ATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR TCA 90 bp TGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCGGTGGTGGAAGAACTTaGGATCCAGGCTGCAAAATG +
Preference number: 4 (lower is better)
Translates to: WKTVCCTTDESRTGISLVGGGRT*DPGCKM
Trigger: CATTTTGCAGCCTGGATCTCAAGTTCTTCCACCACC...GACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR TCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAAGTTCCTCCAGTGAGCTaGGGAACCAGCCCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKVPPVS*GTSPSE
Trigger: CTCGCTGGGGCTGGTTCCTCAGCTCACTGGAGGAAC...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp GACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCTGCCTCACAACATCTaGGCTTCCACTCTTTCCATG +
Preference number: 4 (lower is better)
Translates to: DVHGKQYVVQRMNRGLAFLPHNI*ASTLSM
Trigger: CATGGAAAGAGTGGAAGCTCAGATGTTGTGAGGCAG...AAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506622.5
CDS-3UTR GCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGCCAGAGTTGGCCTGCTaGGGAGGATATCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWPELAC*GGYPAP
Trigger: GGGTGCTGGATATCCTCCGCAGCAGGCCAACTCTGG...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR GCA 90 bp AAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTAGACAGTTGTGCGCCTaGCATCTGGGGACCAGAGTT +
Preference number: 4 (lower is better)
Translates to: KILEITLVSHSGPVFFQCRQLCA*HLGTRV
Trigger: AACTCTGGTCCCCAGATGGCAGGCGCACAACTGTCT...ACATTGGAAGAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCACGGACCAGCCATCTGTaGAGGACCTCCAGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSRTSHL*RTSREA
Trigger: GGCTTCCCTGGAGGTCCTGCACAGATGGCTGGTCCG...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR GCA 90 bp GGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATATTCTTCCGGTAACATaGCAACATATGGGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: GGINLSSSAGSIILNHLDILPVT*QHMGSL
Trigger: CAGACTGCCCATATGTTGGCATGTTACCGGAAGAAT...ATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR GCA 90 bp CACTCTCGCCGTGATTTACCAAGTAAAGGGGACTCTCATTTGAAGGAATGGTGGCAAACTGAAGATCCTTaGTGCTCTTCATGGTGGGTA +
Preference number: 4 (lower is better)
Translates to: HSRRDLPSKGDSHLKEWWQTEDP*CSSWWV
Trigger: TACCCACCATGAAGAGCAGCAAGGATCTTCAGTTTG...CCACCATTCCTTCAAATGAGAGTCCCCTTTACTTGGTAAATCACGGCGAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS-3UTR CCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAGGCGTCCCCTTAGCCTaGACTCACGCTCGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSGVPLA*THARSC
Trigger: GCAACTCCGAGCGTGAGTCCAGGCTAAGGGGACGCC...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp GGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTCTTCATCATACCTGTTaGAGATGCTGTGTGCGACGG +
Preference number: 4 (lower is better)
Translates to: GKQYVVQRMNRGLAFPWSLHHTC*RCCVRR
Trigger: CCGTCGCACACAGCATCTCCAACAGGTATGATGAAG...AGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506622.5
ENST00000509818.5
CDS-3UTR CCA 90 bp AAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTTGATCCAGGCTGCAAAATaGAAGGCTGTGGAGGTCGTG +
Preference number: 4 (lower is better)
Translates to: KTVCCTTDESRTGISLVLIQAAK*KAVEVV
Trigger: CACGACCTCCACAGCCTTCCATTTTGCAGCCTGGAT...CAAGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAAGGTGGGGGCTGGTACTaGGCATTTGGAGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKGGGWY*AFGGGG
Trigger: GCCTCCTCCTCCAAATGCCCAGTACCAGCCCCCACC...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp CATATTCATAAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCTCTGGGGACCAGAGTTaGCCTGCTGCGGAGGATATC +
Preference number: 4 (lower is better)
Translates to: HIHKILEITLVSHSGPVFSGDQS*PAAEDI
Trigger: GATATCCTCCGCAGCAGGCCAACTCTGGTCCCCAGA...GAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTTATGAATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCATGTGCGCCTGCCATCTaGGGACCAGAGTTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSCAPAI*GPELAC
Trigger: GCAGGCCAACTCTGGTCCCCAGATGGCAGGCGCACA...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAACTTCTTCTGGGGCTGTaGCGGACCAGCCATCTGTGC +
Preference number: 4 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQLLLGL*RTSHLC
Trigger: GCACAGATGGCTGGTCCGCCACAGCCCCAGAAGAAG...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAAGGATCCAGCTTCTTCTaGGGCTGTGGCGGACCAGCC +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKGSSFF*GCGGPA
Trigger: GGCTGGTCCGCCACAGCCCCAGAAGAAGCTGGATCC...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp GGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTCTCAATCACCTGGATTaGGCTAGGGATAGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: GKQYVVQRMNRGLAFPWSLNHLD*ARDRVR
Trigger: CCTGACTCTATCCCTAGCCCAATCCAGGTGATTGAG...AGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp TGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCGAGGGATCTGGCCTCTaGTGTTGGTGGCATAAACTT +
Preference number: 4 (lower is better)
Translates to: WKTVCCTTDESRTGISLVEGSGL*CWWHKL
Trigger: AAGTTTATGCCACCAACACCAGAGGCCAGATCCCTC...GACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATAGACCTGTTGCATCTGACTaGTCCACTCTCGCCGTGATT +
Preference number: 4 (lower is better)
Translates to: VSHSGPVFFQCGPDVGNRPVASD*STLAVI
Trigger: AATCACGGCGAGAGTGGACCAGTCAGATGCAACAGG...TCTATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp ATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGGGCTGAAGATAAAGGCTGGTaGGTTGGGAGGCTTACTCTT +
Preference number: 4 (lower is better)
Translates to: INLSSSAGSIILNHLDWAEDKGW*VGRLTL
Trigger: AAGAGTAAGCCTCCCAACCCACCAGCCTTTATCTTC...AGCCCAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp CTTGCACCTGTTGCATCTGACTGGTCCACTCTCGCCGTGATTTACCAAGTAAAGACCTTCAAAGGCTGGTaGAGAACTGCTTTAAAAGCT +
Preference number: 4 (lower is better)
Translates to: LAPVASDWSTLAVIYQVKTFKGW*RTALKA
Trigger: AGCTTTTAAAGCAGTTCTCCACCAGCCTTTGAAGGT...CTTTACTTGGTAAATCACGGCGAGAGTGGACCAGTCAGATGCAACAGGTGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR TCA 90 bp GACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTTTGGTATGGTGCATGTaGGGATGCCACATTGTTGAC +
Preference number: 4 (lower is better)
Translates to: DVHGKQYVVQRMNRGLAFLVWCM*GCHIVD
Trigger: GTCAACAATGTGGCATCCTCACATGCACCATACCAA...AAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000506622.5
ENST00000514561.5
CDS-3UTR TCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAAGGCACCAGGACCATTaGGTGTGGTGGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSRHQDH*VWWVVV
Trigger: CACCACCACCCACCACACTCAATGGTCCTGGTGCCT...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR TCA 90 bp ATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGGGCTGCAGCTAATGGAATCTaGGCTTGCTTAGCCATATCT +
Preference number: 4 (lower is better)
Translates to: INLSSSAGSIILNHLDWAAANGI*ACLAIS
Trigger: AGATATGGCTAAGCAAGCTCAGATTCCATTAGCTGC...AGCCCAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR TCA 90 bp TGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGGCAGCTAATGGAATCTaGGCTTGCTTAGCCATATCT +
Preference number: 4 (lower is better)
Translates to: WHKLVLLCWLYHSQSPGLAANGI*ACLAIS
Trigger: AGATATGGCTAAGCAAGCTCAGATTCCATTAGCTGC...CAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAACTCACGCTCGGAGTTaGAGCTGGGCTGGGAACTGC +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSTHARS*SWAGNC
Trigger: GCAGTTCCCAGCCCAGCTGCAACTCCGAGCGTGAGT...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR GCA 90 bp TCTGACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATGGATAAGAAGATTGTaGAGAGGGTTGGTATGGTGC +
Preference number: 4 (lower is better)
Translates to: SDVHGKQYVVQRMNRGLAWIRRL*RGLVWC
Trigger: GCACCATACCAACCCTCTGCACAATCTTCTTATCCA...TGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506622.5
ENST00000514561.5
CDS-3UTR GCA 90 bp TCTGACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATGCTGCAGAAGGACTTaGACAATTCTTCCGGTAACA +
Preference number: 4 (lower is better)
Translates to: SDVHGKQYVVQRMNRGLACCRRT*TILPVT
Trigger: TGTTACCGGAAGAATTGTGCAAGTCCTTCTGCAGCA...TGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR GCA 90 bp TGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGCTAATTGCCTTCTCTTaGTGCAGCCTAGTTTTGGCT +
Preference number: 4 (lower is better)
Translates to: WHKLVLLCWLYHSQSPGLLIAFS*CSLVLA
Trigger: AGCCAAAACTAGGCTGCAGCAAGAGAAGGCAATTAG...CAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGGGGGAGGGTGACCAGTaGCATGAGCTCCATTCTGAC +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWGEGDQ*HELHSD
Trigger: GTCAGAATGGAGCTCATGCCACTGGTCACCCTCCCC...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGGACAGGTGGAGGGCCTaGAAATCTTTGGGGAGGGTG +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWDRWRA*KSLGRV
Trigger: CACCCTCCCCAAAGATTTCCAGGCCCTCCACCTGTC...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp TGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCGATTGTGCAGAGGGTTaGTATGGTGCATGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: WKTVCCTTDESRTGISLVDCAEG*YGACED
Trigger: ATCCTCACATGCACCATACCAACCCTCTGCACAATC...GACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506622.5
ENST00000514561.5
CDS-3UTR CCA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAACTGGTACTGGGCATTTaGAGGAGGAGGCCCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQLVLGI*RRRPRE
Trigger: CTCTCTGGGCCTCCTCCTCCAAATGCCCAGTACCAG...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAAGGAAGAGGTGGGGGCTaGTACTGGGCATTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQGRGGG*YWAFGG
Trigger: TCCTCCAAATGCCCAGTACCAGCCCCCACCTCTTCC...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAAACCCAAGGTCTGGCCTaGAAGAGGTGGGGGCTGGTA +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKTQGLA*KRWGLV
Trigger: TACCAGCCCCCACCTCTTCCAGGCCAGACCTTGGGT...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp TCTGACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCACTTGTCCTCCTCTGCTaGCTCTATCATTCTCAATCA +
Preference number: 4 (lower is better)
Translates to: SDVHGKQYVVQRMNRGLALVLLC*LYHSQS
Trigger: TGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAG...TGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp AAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTTGTCTGGCCTCTGGTGTTaGTGGCATAAACTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: KTVCCTTDESRTGISLVLSGLWC*WHKLVL
Trigger: GAGGACAAGTTTATGCCACCAACACCAGAGGCCAGA...CAAGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp ATCCATTCTTCTTCCATAGACACCTGGTTGCTTCCTCCTTTTGGCTATTGTGAATCTGGCCTCTGGTGTTaGTGGCATAAACTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: IHSSSIDTWLLPPFGYCESGLWC*WHKLVL
Trigger: GAGGACAAGTTTATGCCACCAACACCAGAGGCCAGA...TTCACAATAGCCAAAAGGAGGAAGCAACCAGGTGTCTATGGAAGAAGAATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CCA 90 bp AAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGCTTCCATGCCAGCCTaGATGACAGGAGCAAAGACA +
Preference number: 4 (lower is better)
Translates to: KILEITLVSHSGPVFFQCASMPA*MTGAKT
Trigger: TGTCTTTGCTCCTGTCATCCAGGCTGGCATGGAAGC...ACATTGGAAGAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CCA 90 bp TGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGTGGTGCTTCAGCAGTTaGCAAGGAAGAATGGAAGAT +
Preference number: 4 (lower is better)
Translates to: WHKLVLLCWLYHSQSPGLWCFSS*QGRMED
Trigger: ATCTTCCATTCTTCCTTGCCAACTGCTGAAGCACCA...CAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR TCA 90 bp GACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTATGTTGTACAACGGATaGATCGAGGACTGGCATTTC +
Preference number: 4 (lower is better)
Translates to: DVHGKQYVVQRMNRGLAFMLYNG*IEDWHF
Trigger: GAAATGCCAGTCCTCGATTCATCCGTTGTACAACAT...AAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR TCA 90 bp TGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTTTGCTTAGCCATATCTaGCGTGCATGGAAAACAGTA +
Preference number: 4 (lower is better)
Translates to: CWWHKLVLLCWLYHSQSPLLSHI*RAWKTV
Trigger: TACTGTTTTCCATGCACGTCAGATATGGCTAAGCAA...AGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR TCA 90 bp ATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGGGCTTTGCTTAGCCATATCTaGCGTGCATGGAAAACAGTA +
Preference number: 4 (lower is better)
Translates to: INLSSSAGSIILNHLDWALLSHI*RAWKTV
Trigger: TACTGTTTTCCATGCACGTCAGATATGGCTAAGCAA...AGCCCAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR TCA 90 bp AAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTAAGGGGACTCTCATTTaGAGGAATGGTGGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: KILEITLVSHSGPVFFQCKGTLI*RNGGKG
Trigger: CCCTTTGCCACCATTCCTTCAAATGAGAGTCCCCTT...ACATTGGAAGAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR TCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCATGCACCTGTTGCATCTaGCTGGTCCACTCTCGCCGT +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSCTCCI*LVHSRR
Trigger: ACGGCGAGAGTGGACCAGTCAGATGCAACAGGTGCA...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGGTCACCACCATCATCTaGGGCTGGGCCAGATTACTC +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWVTTII*GWARLL
Trigger: GAGTAATCTGGCCCAGCCTCAGATGATGGTGGTGAC...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp GGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTGCAGTCCTTGGCCAATaGGTCATAGACATTTGTTTG +
Preference number: 4 (lower is better)
Translates to: GKQYVVQRMNRGLAFPWSAVLGQ*VIDICL
Trigger: CAAACAAATGTCTATGACTCATTGGCCAAGGACTGC...AGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR TCA 90 bp TGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGAGACACAAGAATTCTaGGTCGTTTTTCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: CWWHKLVLLCWLYHSQSPETQEF*VVFLFL
Trigger: CAGGAAGAGAAAAACGACTCAGAATTCTTGTGTCTC...AGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS-3UTR TCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATGTTTATGGTCGCTTCTaGTCCACAGCATGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHVYGRF*STAWAW
Trigger: CCAGGCCCATGCTGTGGATCAGAAGCGACCATAAAC...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511481.5
CDS-3UTR GCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAGGCCCCCAAAGGCCCTaGTGGCTTCATCATACCTGT +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSGPQRP*WLHHTC
Trigger: ACAGGTATGATGAAGCCAGCAGGGCCTTTGGGGGCC...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR GCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAGGACCAGAGTTGGCCTaGTGCGGAGGATATCCAGCA +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSGPELA*CGGYPA
Trigger: TGCTGGATATCCTCCGCAGCAGGCCAACTCTGGTCC...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR GCA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAAAGACAGTTGTGCGCCTaGCATCTGGGGACCAGAGTT +
Preference number: 4 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQRQLCA*HLGTRV
Trigger: AACTCTGGTCCCCAGATGGCAGGCGCACAACTGTCT...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR GCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATGGGTAAGACAGTTGTaGGCCTGCCATCTGGGGACC +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKWVRQL*ACHLGT
Trigger: GGTCCCCAGATGGCAGGCGCACAACTGTCTTACCCA...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR GCA 90 bp TCTGACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCAAAACTTGTCCTCCTCTaGTGGCTCTATCATTCTCAA +
Preference number: 4 (lower is better)
Translates to: SDVHGKQYVVQRMNRGLAKLVLL*WLYHSQ
Trigger: TTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTT...TGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp ATTTTGGTCACCTTTCTAAGAAAGCTGGGGGCTTGGGTGAAGACATCTGAGGAGGCAGACGTCTCTTCTTaGTCTTCCTTTGGAATTTTT +
Preference number: 4 (lower is better)
Translates to: ILVTFLRKLGAWVKTSEEADVSS*SSFGIF
Trigger: AAAAATTCCAAAGGAAGAGCAAGAAGAGACGTCTGC...CTCCTCAGATGTCTTCACCCAAGCCCCCAGCTTTCTTAGAAAGGTGACCAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS-3UTR GCA 90 bp AAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTTGCTGAGTTTGTCATCGTaGTTGAACTCCACGGTCACT +
Preference number: 4 (lower is better)
Translates to: KTVCCTTDESRTGISLVLLSLSS*LNSTVT
Trigger: AGTGACCGTGGAGTTCAAGCACGATGACAAACTCAG...CAAGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR GCA 90 bp ATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGGGCTATTTTGTACCCTAATTaGCTTCTCTTGCTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: INLSSSAGSIILNHLDWAILYPN*LLLLQP
Trigger: AGGCTGCAGCAAGAGAAGGCAATTAGGGTACAAAAT...AGCCCAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR GCA 90 bp TGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTTCAAGCTATTCTCCTaGCTCAGCCTCCTAAGTAAC +
Preference number: 4 (lower is better)
Translates to: WKTVCCTTDESRTGISLVFKLFS*LSLLSN
Trigger: GTTACTTAGGAGGCTGAGGCAGGAGAATAGCTTGAA...GACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CCA 90 bp ATCCATTCTTCTTCCATAGACACCTGGTTGCTTCCTCCTTTTGGCTATTGTGAAGATTGTGCAGAGGGTTaGTATGGTGCATGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: IHSSSIDTWLLPPFGYCEDCAEG*YGACED
Trigger: ATCCTCACATGCACCATACCAACCCTCTGCACAATC...TTCACAATAGCCAAAAGGAGGAAGCAACCAGGTGTCTATGGAAGAAGAATGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CCA 90 bp CATATTCATAAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCATCCAGGCTGCAAAATaGAAGGCTGTGGAGGTCGTG +
Preference number: 4 (lower is better)
Translates to: HIHKILEITLVSHSGPVFIQAAK*KAVEVV
Trigger: CACGACCTCCACAGCCTTCCATTTTGCAGCCTGGAT...GAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTTATGAATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCATCTGGGGACCAGAGTTaGCCTGCTGCGGAGGATATC +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSSGDQS*PAAEDI
Trigger: GATATCCTCCGCAGCAGGCCAACTCTGGTCCCCAGA...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCATCCAGGGAAGCCTCCTaGGTAAGACAGTTGTGCGCC +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSSREAS*VRQLCA
Trigger: GGCGCACAACTGTCTTACCCAGGAGGCTTCCCTGGA...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp GTTATATGTGATAAAACCCACTCGAATTGCAGACGTCTCTTCTTGCTCTTCCTTTCTGGCCTCTGGTGTTaGTGGCATAAACTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: VICDKTHSNCRRLFLLFLSGLWC*WHKLVL
Trigger: GAGGACAAGTTTATGCCACCAACACCAGAGGCCAGA...AAGGAAGAGCAAGAAGAGACGTCTGCAATTCGAGTGGGTTTTATCACATATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATATGACCTTCAAAGGCTaGTGGAGAACTGCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: GGINLSSSAGSIILNHLDMTFKG*WRTALK
Trigger: TTTTAAAGCAGTTCTCCACCAGCCTTTGAAGGTCAT...ATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CCA 90 bp CTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATTGTTGGTCCCTTTACTaGCTGGTGTTCAAACAGCTT +
Preference number: 4 (lower is better)
Translates to: LVSHSGPVFFQCGPDVGNCWSLY*LVFKQL
Trigger: AAGCTGTTTGAACACCAGCCAGTAAAGGGACCAACA...ATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CCA 90 bp GGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTTTTGTCCAAATGCTTTaGGAGAAGCCTCTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: GKQYVVQRMNRGLAFPWSFVQML*EKPLSL
Trigger: AAGGGACAGAGGCTTCTCCCAAAGCATTTGGACAAA...AGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS-3UTR TCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAAGGATGCCACATTGTTaGCAGGTGGAGGGCCTGGAA +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSRMPHC*QVEGLE
Trigger: TTCCAGGCCCTCCACCTGTCAACAATGTGGCATCCT...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR TCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAGTCACCACCATCATCTaGGGCTGGGCCAGATTACTC +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSVTTII*GWARLL
Trigger: GAGTAATCTGGCCCAGCCTCAGATGATGGTGGTGAC...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGGTTTGTCATCGTGCTTaGACTCCACGGTCACTGCCT +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWVCHRA*TPRSLP
Trigger: AGGCAGTGACCGTGGAGTTCAAGCACGATGACAAAC...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATGTTTGTCATCGTGCTTaGACTCCACGGTCACTGCCT +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHVCHRA*TPRSLP
Trigger: AGGCAGTGACCGTGGAGTTCAAGCACGATGACAAAC...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCACCACACCCATGGTCATaGCCAGCTGTCTCTGGTATG +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSPHPWS*PAVSGM
Trigger: CATACCAGAGACAGCTGGTCATGACCATGGGTGTGG...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAACCACACCCATGGTCATaGCCAGCTGTCTCTGGTATG +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKPHPWS*PAVSGM
Trigger: CATACCAGAGACAGCTGGTCATGACCATGGGTGTGG...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp TGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCATAGAATGGTGGAACTaGGGGAACATAATCTGCTGT +
Preference number: 4 (lower is better)
Translates to: WKTVCCTTDESRTGISLVIEWWN*GNIICC
Trigger: ACAGCAGATTATGTTCCCTCAGTTCCACCATTCTAT...GACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS-3UTR GCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCACATACCTGTTGGAGATaGTGTGTGCGACGGATCCCC +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSHTCWR*CVRRIP
Trigger: GGGGATCCGTCGCACACAGCATCTCCAACAGGTATG...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR GCA 90 bp ATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGGGCTGCAGACGTCTCTTCTTaGTCTTCCTTTGGAATTTTT +
Preference number: 4 (lower is better)
Translates to: INLSSSAGSIILNHLDWAADVSS*SSFGIF
Trigger: AAAAATTCCAAAGGAAGAGCAAGAAGAGACGTCTGC...AGCCCAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGGAACTCCACGGTCACTaGCTTGTCACAATCGATGGC +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWELHGH*LVTIDG
Trigger: GCCATCGATTGTGACAAGGCAGTGACCGTGGAGTTC...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR GCA 90 bp AAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTTGCAGCTAGCTGAGAGCTaGAGTTTAAGCCAAGATTGT +
Preference number: 4 (lower is better)
Translates to: KTVCCTTDESRTGISLVLQLAES*SLSQDC
Trigger: ACAATCTTGGCTTAAACTGCAGCTCTCAGCTAGCTG...CAAGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR GCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATTCAGTTCTGGTGGGCTaGTTACTCCCAACCACAGGA +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHSVLVG*LLPTTG
Trigger: TCCTGTGGTTGGGAGTAAGCAGCCCACCAGAACTGA...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR GCA 90 bp CTTTTGGCTATTGTGAATACTGTCTGCAATAATCCAAAGTGGCAACATATTCATTCTTCCTGTTGGAGATaGTGTGTGCGACGGATCCCC +
Preference number: 4 (lower is better)
Translates to: LLAIVNTVCNNPKWQHIHSSCWR*CVRRIP
Trigger: GGGGATCCGTCGCACACAGCATCTCCAACAGGAAGA...ATGAATATGTTGCCACTTTGGATTATTGCAGACAGTATTCACAATAGCCAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAACCCCAAAGGCCCTGCTaGCTTCATCATACCTGTTGG +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKPQRPC*LHHTCW
Trigger: CCAACAGGTATGATGAAGCCAGCAGGGCCTTTGGGG...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAAATCCAGGCTGCAAAATaGAAGGCTGTGGAGGTCGTG +
Preference number: 4 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQIQAAK*KAVEVV
Trigger: CACGACCTCCACAGCCTTCCATTTTGCAGCCTGGAT...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp CATATTCATAAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCGAGGGATCTGGCCTCTaGTGTTGGTGGCATAAACTT +
Preference number: 4 (lower is better)
Translates to: HIHKILEITLVSHSGPVFEGSGL*CWWHKL
Trigger: AAGTTTATGCCACCAACACCAGAGGCCAGATCCCTC...GAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTTATGAATATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp GACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTGGACTGGCATTTCCTTaGTCTTGTATCATGCAATCT +
Preference number: 4 (lower is better)
Translates to: DVHGKQYVVQRMNRGLAFGLAFP*SCIMQS
Trigger: AGATTGCATGATACAAGACCAAGGAAATGCCAGTCC...AAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAACCTGTTGCATCTGACTaGTCCACTCTCGCCGTGATT +
Preference number: 4 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQPVASD*STLAVI
Trigger: AATCACGGCGAGAGTGGACCAGTCAGATGCAACAGG...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp AAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGAAGATAAAGGCTGGTaGGTTGGGAGGCTTACTCTT +
Preference number: 4 (lower is better)
Translates to: KILEITLVSHSGPVFFQCEDKGW*VGRLTL
Trigger: AAGAGTAAGCCTCCCAACCCACCAGCCTTTATCTTC...ACATTGGAAGAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATGCTTCCATGCCAGCCTaGATGACAGGAGCAAAGACA +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHASMPA*MTGAKT
Trigger: TGTCTTTGCTCCTGTCATCCAGGCTGGCATGGAAGC...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp TGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGATCCATGTTGTAGCATaGGTCAGACTTTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: WHKLVLLCWLYHSQSPGLIHVVA*VRLFFL
Trigger: AAGGAAGAAAAGTCTGACCCATGCTACAACATGGAT...CAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR TCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCACAGCTGGGTGACAGATaGAGTGGATATAGGACCTGG +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSQLGDR*SGYRTW
Trigger: CCAGGTCCTATATCCACTTCATCTGTCACCCAGCTG...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR TCA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAAGGTGGTGGAAGAACTTaGGATCCAGGCTGCAAAATG +
Preference number: 4 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQGGGRT*DPGCKM
Trigger: CATTTTGCAGCCTGGATCTCAAGTTCTTCCACCACC...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR TCA 90 bp AAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTTGGGGATTCTTGATAGTTaGCAAGGAAACCATCCAACA +
Preference number: 4 (lower is better)
Translates to: KTVCCTTDESRTGISLVLGILDS*QGNHPT
Trigger: TGTTGGATGGTTTCCTTGTCAACTATCAAGAATCCC...CAAGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR TCA 90 bp TGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTTGGTCCAACAAATTATaGATCACAGATTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: CWWHKLVLLCWLYHSQSPWSNKL*ITDWDS
Trigger: AGAATCCCAATCTGTGATTCATAATTTGTTGGACCA...AGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR TCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGGCCACGTCCACATACTaGCTAGGAAAGAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWATSTY*LGKRKS
Trigger: ACTCTTCCTCTTTCCTAGTCAGTATGTGGACGTGGC...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATGCCACGTCCACATACTaGCTAGGAAAGAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHATSTY*LGKRKS
Trigger: ACTCTTCCTCTTTCCTAGTCAGTATGTGGACGTGGC...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGCTAGAATTTCCCGGATaGCCTTCAAAGGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWLEFPG*PSKAGG
Trigger: TCCACCAGCCTTTGAAGGTCATCCGGGAAATTCTAG...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGTGCTCGTTCATCAGTTaGGATCTCTGGTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWCSFIS*DLWSAE
Trigger: CTCAGCAGACCAGAGATCTCAACTGATGAACGAGCA...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATTGCTCGTTCATCAGTTaGGATCTCTGGTCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHCSFIS*DLWSAE
Trigger: CTCAGCAGACCAGAGATCTCAACTGATGAACGAGCA...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp GACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCATAATCTGCTGTGTTaGGACACAAGAATTCTGAGT +
Preference number: 4 (lower is better)
Translates to: DVHGKQYVVQRMNRGLAFHNLLC*DTRILS
Trigger: ACTCAGAATTCTTGTGTCTCAACACAGCAGATTATG...AAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS-3UTR GCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAGGTCGTGGAGGAGTCTaGAATGATGTGGCTGACAGA +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSGRGGV*NDVADR
Trigger: TCTGTCAGCCACATCATTGCAGACTCCTCCACGACC...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR GCA 90 bp AAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTTGAAACTTGTCCTCCTCTaGTGGCTCTATCATTCTCAA +
Preference number: 4 (lower is better)
Translates to: KTVCCTTDESRTGISLVLKLVLL*WLYHSQ
Trigger: TTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTT...CAAGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp GTTATATGTGATAAAACCCACTCGAATTGCAGACGTCTCTTCTTGCTCTTCCTTAAAACCCACTCGAATTaGAGACGTCTCTTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: VICDKTHSNCRRLFLLFLKTHSN*RRLFLL
Trigger: GAGCAAGAAGAGACGTCTGCAATTCGAGTGGGTTTT...AAGGAAGAGCAAGAAGAGACGTCTGCAATTCGAGTGGGTTTTATCACATATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGTTTGAGCTTCCCTGGTaGTTCAGCAGTTGGCAAGGA +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWFELPW*FSSWQG
Trigger: TCCTTGCCAACTGCTGAAGCACCAGGGAAGCTCAAA...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR GCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAAGAACTCCACGGTCACTaGCTTGTCACAATCGATGGC +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKELHGH*LVTIDG
Trigger: GCCATCGATTGTGACAAGGCAGTGACCGTGGAGTTC...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR GCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAGTTCTGGTGGGCTaGTTACTCCCAACCACAGGA +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKSVLVG*LLPTTG
Trigger: TCCTGTGGTTGGGAGTAAGCAGCCCACCAGAACTGA...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATCTTCATCATACCTGTTaGAGATGCTGTGTGCGACGG +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHLHHTC*RCCVRR
Trigger: CCGTCGCACACAGCATCTCCAACAGGTATGATGAAG...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp CATGGTCTTCAGTTCTTCACATATGAGCTTGACAAGTCCATTCTTTATGTTACTCTTCATCATACCTGTTaGAGATGCTGTGTGCGACGG +
Preference number: 4 (lower is better)
Translates to: HGLQFFTYELDKSILYVTLHHTC*RCCVRR
Trigger: CCGTCGCACACAGCATCTCCAACAGGTATGATGAAG...AGTAACATAAAGAATGGACTTGTCAAGCTCATATGTGAAGAACTGAAGACCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS-3UTR CCA 90 bp GGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTAGTGGATATAGGACCTaGATAAGAAGATTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: GKQYVVQRMNRGLAFPWSSGYRT*IRRLCR
Trigger: TCTGCACAATCTTCTTATCCAGGTCCTATATCCACT...AGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506622.5
ENST00000514561.5
CDS-3UTR CCA 90 bp TCTATCCAAGTGCATCTGGAAATTGTTGTATTTGTAAAGGGTTCCTCCAGTGAGCTTGTCCTCCTCTGCTaGCTCTATCATTCTCAATCA +
Preference number: 4 (lower is better)
Translates to: SIQVHLEIVVFVKGSSSELVLLC*LYHSQS
Trigger: TGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAG...CTCACTGGAGGAACCCTTTACAAATACAACAATTTCCAGATGCACTTGGATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAGGCCTCTGGTGTTGGTaGCATAAACTTGTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSGLWCW*HKLVLL
Trigger: GAGGAGGACAAGTTTATGCCACCAACACCAGAGGCC...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGGAGGGATCTGGCCTCTaGTGTTGGTGGCATAAACTT +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWEGSGL*CWWHKL
Trigger: AAGTTTATGCCACCAACACCAGAGGCCAGATCCCTC...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAACCTGTTGCATCTGACTaGTCCACTCTCGCCGTGATT +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKPVASD*STLAVI
Trigger: AATCACGGCGAGAGTGGACCAGTCAGATGCAACAGG...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGGAGCCACGCAGTCCTTaGCCAATGAGTCATAGACAT +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWEPRSP*PMSHRH
Trigger: ATGTCTATGACTCATTGGCCAAGGACTGCGTGGCTC...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAATTGGATCAGTTCTGGTaGGCTGCTTACTCCCAACCA +
Preference number: 4 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQLDQFW*AAYSQP
Trigger: TGGTTGGGAGTAAGCAGCCCACCAGAACTGATCCAA...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATTTGGATCAGTTCTGGTaGGCTGCTTACTCCCAACCA +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHLDQFW*AAYSQP
Trigger: TGGTTGGGAGTAAGCAGCCCACCAGAACTGATCCAA...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATTTGGTATGGTGCATGTaGGGATGCCACATTGTTGAC +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHLVWCM*GCHIVD
Trigger: GTCAACAATGTGGCATCCTCACATGCACCATACCAA...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR TCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAAAAGGGGACTCTCATTTaGAGGAATGGTGGCAAAGGG +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKKGTLI*RNGGKG
Trigger: CCCTTTGCCACCATTCCTTCAAATGAGAGTCCCCTT...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR TCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAACTAGAATTTCCCGGATaGCCTTCAAAGGCTGGTGGA +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKLEFPG*PSKAGG
Trigger: TCCACCAGCCTTTGAAGGTCATCCGGGAAATTCTAG...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATCCTGAGCACCAAAGCTaGAGTTCTAAATGCCATCTC +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHPEHQS*SSKCHL
Trigger: GAGATGGCATTTAGAACTTCAGCTTTGGTGCTCAGG...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAACCTGAGCACCAAAGCTaGAGTTCTAAATGCCATCTC +
Preference number: 4 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQPEHQS*SSKCHL
Trigger: GAGATGGCATTTAGAACTTCAGCTTTGGTGCTCAGG...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR GCA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAACTGAGTTTGTCATCGTaGTTGAACTCCACGGTCACT +
Preference number: 4 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQLSLSS*LNSTVT
Trigger: AGTGACCGTGGAGTTCAAGCACGATGACAAACTCAG...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAGTGCCCATAATGAGGTaGAGAAAGGCCTATTCCAGG +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSVPIMR*RKAYSR
Trigger: CCTGGAATAGGCCTTTCTCCACCTCATTATGGGCAC...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGCACATTGTTGACAGGTaGAGGGCCTGGAAATCTTTG +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWHIVDR*RAWKSL
Trigger: CAAAGATTTCCAGGCCCTCCACCTGTCAACAATGTG...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAAGATTGTGCAGAGGGTTaGTATGGTGCATGTGAGGAT +
Preference number: 4 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQDCAEG*YGACED
Trigger: ATCCTCACATGCACCATACCAACCCTCTGCACAATC...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAACTCAATCACCTGGATTaGGCTAGGGATAGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKLNHLD*ARDRVR
Trigger: CCTGACTCTATCCCTAGCCCAATCCAGGTGATTGAG...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCATCTGGCCTCTGGTGTTaGTGGCATAAACTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSSGLWC*WHKLVL
Trigger: GAGGACAAGTTTATGCCACCAACACCAGAGGCCAGA...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp GTTATATGTGATAAAACCCACTCGAATTGCAGACGTCTCTTCTTGCTCTTCCTTGGACTGGCATTTCCTTaGTCTTGTATCATGCAATCT +
Preference number: 4 (lower is better)
Translates to: VICDKTHSNCRRLFLLFLGLAFP*SCIMQS
Trigger: AGATTGCATGATACAAGACCAAGGAAATGCCAGTCC...AAGGAAGAGCAAGAAGAGACGTCTGCAATTCGAGTGGGTTTTATCACATATAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATGAAGATAAAGGCTGGTaGGTTGGGAGGCTTACTCTT +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHEDKGW*VGRLTL
Trigger: AAGAGTAAGCCTCCCAACCCACCAGCCTTTATCTTC...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGCATGAAGATAAAGGCTaGTGGGTTGGGAGGCTTACT +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWHEDKG*WVGRLT
Trigger: AGTAAGCCTCCCAACCCACCAGCCTTTATCTTCATG...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATGTTTTTGAGCTTCCCTaGTGCTTCAGCAGTTGGCAA +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHVFELP*CFSSWQ
Trigger: TTGCCAACTGCTGAAGCACCAGGGAAGCTCAAAAAC...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAAGAGCCACGCAGTCCTTaGCCAATGAGTCATAGACAT +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKEPRSP*PMSHRH
Trigger: ATGTCTATGACTCATTGGCCAAGGACTGCGTGGCTC...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCATCCTTGGATCAGTTCTaGTGGGCTGCTTACTCCCAA +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSSLDQF*WAAYSQ
Trigger: TTGGGAGTAAGCAGCCCACCAGAACTGATCCAAGGA...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCCTTGGATCAGTTCTaGTGGGCTGCTTACTCCCAA +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKSLDQF*WAAYSQ
Trigger: TTGGGAGTAAGCAGCCCACCAGAACTGATCCAAGGA...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAAGAGTTGTTGAGAGTATaGGTTTCCCACTTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQELLRV*VSHFRQ
Trigger: CTGCCTGAAGTGGGAAACCCATACTCTCAACAACTC...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATGAGTTGTTGAGAGTATaGGTTTCCCACTTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHELLRV*VSHFRQ
Trigger: CTGCCTGAAGTGGGAAACCCATACTCTCAACAACTC...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATATGTTGTACAACGGATaGATCGAGGACTGGCATTTC +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHMLYNG*IEDWHF
Trigger: GAAATGCCAGTCCTCGATTCATCCGTTGTACAACAT...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR TCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGGCAGCTAATGGAATCTaGGCTTGCTTAGCCATATCT +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWAANGI*ACLAIS
Trigger: AGATATGGCTAAGCAAGCTCAGATTCCATTAGCTGC...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR TCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATGCAGTCCTTGGCCAATaGGTCATAGACATTTGTTTG +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHAVLGQ*VIDICL
Trigger: CAAACAAATGTCTATGACTCATTGGCCAAGGACTGC...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGGCAGTCCTTGGCCAATaGGTCATAGACATTTGTTTG +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWAVLGQ*VIDICL
Trigger: CAAACAAATGTCTATGACTCATTGGCCAAGGACTGC...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGGTCTTCTTTGACCACTaGTTGTCGTGTAAAGCACAG +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWVFFDH*LSCKAQ
Trigger: CTGTGCTTTACACGACAATCAGTGGTCAAAGAAGAC...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGGAATATTCCTTCTTCTaGAAGACGGGACTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWEYSFF*KTGLRA
Trigger: TGCTCTGAGTCCCGTCTTTCAGAAGAAGGAATATTC...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR GCA 90 bp AAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGAGGCTTACTCTTTCTaGAATAATCCAAAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: KILEITLVSHSGPVFFQCEAYSF*NNPKWQ
Trigger: TTGCCACTTTGGATTATTGCAGAAAGAGTAAGCCTC...ACATTGGAAGAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS-3UTR GCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGAAAACCCACTCGAATTaGAGACGTCTCTTCTTGCTC +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWKTHSN*RRLFLL
Trigger: GAGCAAGAAGAGACGTCTGCAATTCGAGTGGGTTTT...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR GCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAACTGAGTTTGTCATCGTaGTTGAACTCCACGGTCACT +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKLSLSS*LNSTVT
Trigger: AGTGACCGTGGAGTTCAAGCACGATGACAAACTCAG...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR GCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATATTCTTCCGGTAACATaGCAACATATGGGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHILPVT*QHMGSL
Trigger: CAGACTGCCCATATGTTGGCATGTTACCGGAAGAAT...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR GCA 90 bp CTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATATTGTGAATACTGTCTaGAATAATCCAAAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: LVSHSGPVFFQCGPDVGNIVNTV*NNPKWQ
Trigger: TTGCCACTTTGGATTATTGCAGACAGTATTCACAAT...ATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAACCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CCA 90 bp GTTATATGTGATAAAACCCACTCGAATTGCAGACGTCTCTTCTTGCTCTTCCTTAGTGGATATAGGACCTaGATAAGAAGATTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: VICDKTHSNCRRLFLLFLSGYRT*IRRLCR
Trigger: TCTGCACAATCTTCTTATCCAGGTCCTATATCCACT...AAGGAAGAGCAAGAAGAGACGTCTGCAATTCGAGTGGGTTTTATCACATATAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGTCATTCTCAATCACCTaGATTGGGCTAGGGATAGAG +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWSFSIT*IGLGIE
Trigger: CTCTATCCCTAGCCCAATCCAGGTGATTGAGAATGA...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATCTTGTCCTCCTCTGCTaGCTCTATCATTCTCAATCA +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHLVLLC*LYHSQS
Trigger: TGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAG...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAGAAGATAAAGGCTGGTaGGTTGGGAGGCTTACTCTT +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSEDKGW*VGRLTL
Trigger: AAGAGTAAGCCTCCCAACCCACCAGCCTTTATCTTC...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAATGGTGCTTCAGCAGTTaGCAAGGAAGAATGGAAGAT +
Preference number: 4 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQWCFSS*QGRMED
Trigger: ATCTTCCATTCTTCCTTGCCAACTGCTGAAGCACCA...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATTCTGGTAGAATAAGCTaGCTTGCTGCAGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHSGRIS*LAAEGL
Trigger: AAGTCCTTCTGCAGCAAGCCAGCTTATTCTACCAGA...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGATGACCAGCTGTCTCTaGTATGCTCGTTCATCAGTT +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWMTSCL*YARSSV
Trigger: AACTGATGAACGAGCATACCAGAGACAGCTGGTCAT...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAACATCTAACGTGTGTATaGGCAGAAGTTGTGGGTAGA +
Preference number: 4 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQHLTCV*AEVVGR
Trigger: TCTACCCACAACTTCTGCCCATACACACGTTAGATG...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGGGGATTCTTGATAGTTaGCAAGGAAACCATCCAACA +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWGILDS*QGNHPT
Trigger: TGTTGGATGGTTTCCTTGTCAACTATCAAGAATCCC...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAAGTCTTCTTTGACCACTaGTTGTCGTGTAAAGCACAG +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKVFFDH*LSCKAQ
Trigger: CTGTGCTTTACACGACAATCAGTGGTCAAAGAAGAC...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATAGATCTCTGGTCTGCTaGGTAGTACACAGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHRSLVC*VVHSFS
Trigger: TGAAAAACTGTGTACTACTCAGCAGACCAGAGATCT...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGATCATTCTGAGTTGTTaGGAGTATGGGTTTCCCACT +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWIILSC*EYGFPT
Trigger: AGTGGGAAACCCATACTCTCAACAACTCAGAATGAT...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATGCTGCTTTACAATTGTaGGCTTCATTGAATATGGCC +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHAALQL*ASLNMA
Trigger: GGCCATATTCAATGAAGCTCACAATTGTAAAGCAGC...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAAAATTGGCTTTATACCTaGGCACCAAAGCTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQNWLYT*APKLKF
Trigger: GAACTTCAGCTTTGGTGCTCAGGTATAAAGCCAATT...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAAAATTGGGAGAGGAACTaGGACAACTTTTTACCCCAA +
Preference number: 4 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQNWERN*DNFLPQ
Trigger: TTGGGGTAAAAAGTTGTCTCAGTTCCTCTCCCAATT...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp GTTATATGTGATAAAACCCACTCGAATTGCAGACGTCTCTTCTTGCTCTTCCTTTCTCTCTTTTCTTCTTaGGAAATTGCAGTAAAGGAG +
Preference number: 4 (lower is better)
Translates to: VICDKTHSNCRRLFLLFLSLFSS*EIAVKE
Trigger: CTCCTTTACTGCAATTTCTCAAGAAGAAAAGAGAGA...AAGGAAGAGCAAGAAGAGACGTCTGCAATTCGAGTGGGTTTTATCACATATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR GCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATGGATAAGAAGATTGTaGAGAGGGTTGGTATGGTGC +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKWIRRL*RGLVWC
Trigger: GCACCATACCAACCCTCTGCACAATCTTCTTATCCA...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR GCA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAAAAACTTGTCCTCCTCTaGTGGCTCTATCATTCTCAA +
Preference number: 4 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQKLVLL*WLYHSQ
Trigger: TTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTT...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR GCA 90 bp AAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTCATCATTCACACAGTTaGAAAATCCACACTGATATC +
Preference number: 4 (lower is better)
Translates to: KILEITLVSHSGPVFFQCHHSHS*KIHTDI
Trigger: GATATCAGTGTGGATTTTGCAACTGTGTGAATGATG...ACATTGGAAGAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAACAGCTAGCTGAGAGCTaGAGTTTAAGCCAAGATTGT +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKQLAES*SLSQDC
Trigger: ACAATCTTGGCTTAAACTGCAGCTCTCAGCTAGCTG...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR GCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAATTCTTCCGGTAACATaGCAACATATGGGCAGTCTG +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSILPVT*QHMGSL
Trigger: CAGACTGCCCATATGTTGGCATGTTACCGGAAGAAT...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR GCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATGCTGCAGAAGGACTTaGACAATTCTTCCGGTAACA +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKCCRRT*TILPVT
Trigger: TGTTACCGGAAGAATTGTGCAAGTCCTTCTGCAGCA...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR GCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCATGCTGCAGAAGGACTTaGACAATTCTTCCGGTAACA +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSCCRRT*TILPVT
Trigger: TGTTACCGGAAGAATTGTGCAAGTCCTTCTGCAGCA...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR GCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATTCTGGTTGTTCTCGCTaGTTTACAATTGTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHSGCSR*FTIVSF
Trigger: GAAGCTCACAATTGTAAAGCAGCGAGAACAACCAGA...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGGGACTGGCATTTCCTTaGTCTTGTATCATGCAATCT +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWGLAFP*SCIMQS
Trigger: AGATTGCATGATACAAGACCAAGGAAATGCCAGTCC...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp AAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTTGTTGGAAATAGAATGGTaGAACATCATTCACACAGTT +
Preference number: 4 (lower is better)
Translates to: KTVCCTTDESRTGISLVLLEIEW*NIIHTV
Trigger: AACTGTGTGAATGATGTTCCACCATTCTATTTCCAA...CAAGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CCA 90 bp GTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATAGAATGTTGGAAATAGAATaGTGGAACATCATTCACACA +
Preference number: 4 (lower is better)
Translates to: VSHSGPVFFQCGPDVGNRMLEIE*WNIIHT
Trigger: TGTGTGAATGATGTTCCACCATTCTATTTCCAACAT...TCTATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CCA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAAACCTTCAAAGGCTGGTaGAGAACTGCTTTAAAAGCT +
Preference number: 4 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQTFKGW*RTALKA
Trigger: AGCTTTTAAAGCAGTTCTCCACCAGCCTTTGAAGGT...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCATCTGGTAGAATAAGCTaGCTTGCTGCAGAAGGACTT +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSSGRIS*LAAEGL
Trigger: AAGTCCTTCTGCAGCAAGCCAGCTTATTCTACCAGA...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAATGACCAGCTGTCTCTaGTATGCTCGTTCATCAGTT +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSMTSCL*YARSSV
Trigger: AACTGATGAACGAGCATACCAGAGACAGCTGGTCAT...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATTATGGGCAGAAGTTGTaGGTAGAAGAAAAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHYGQKL*VEEKLR
Trigger: TCTCAGCTTTTCTTCTACCCACAACTTCTGCCCATA...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCACATCTAACGTGTGTATaGGCAGAAGTTGTGGGTAGA +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSHLTCV*AEVVGR
Trigger: TCTACCCACAACTTCTGCCCATACACACGTTAGATG...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
3UTR CAA 72 bp CTGGTCCAACAAATTATGAATCACAGATTGGGATTCTaGATAGTTGACAAGGAAACCATCCAACAAAGGAAC +
Preference number: 4 (lower is better)
Translates to: LVQQIMNHRLGF*IVDKETIQQRN
Trigger: GTTCCTTTGTTGGATGGTTTCCTTGTCAACTATCAAGAATCCCAATCTGTGATTCATAATTTGTTGGACCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR TCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCATTGCTTAGCCATATCTaGCGTGCATGGAAAACAGTA +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSLLSHI*RAWKTV
Trigger: TACTGTTTTCCATGCACGTCAGATATGGCTAAGCAA...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR TCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAAGGGATTCTTGATAGTTaGCAAGGAAACCATCCAACA +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKGILDS*QGNHPT
Trigger: TGTTGGATGGTTTCCTTGTCAACTATCAAGAATCCC...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAAAACATATGGGCAGTCTaGTTAACTAGAATTTCCCGG +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKNIWAV*LTRISR
Trigger: CCGGGAAATTCTAGTTAATCAGACTGCCCATATGTT...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAAACATATGGGCAGTCTaGTTAACTAGAATTTCCCGG +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSNIWAV*LTRISR
Trigger: CCGGGAAATTCTAGTTAATCAGACTGCCCATATGTT...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATGTAACATTGTACTCTTaGCATCTAACGTGTGTATGG +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHVTLYS*HLTCVW
Trigger: CCATACACACGTTAGATGTCAAGAGTACAATGTTAC...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAATCATTCTGAGTTGTTaGGAGTATGGGTTTCCCACT +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSIILSC*EYGFPT
Trigger: AGTGGGAAACCCATACTCTCAACAACTCAGAATGAT...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAATACCCATTATCATTCTaGGTTGTTGAGAGTATGGGT +
Preference number: 4 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQYPLSF*VVESMG
Trigger: ACCCATACTCTCAACAACTCAGAATGATAATGGGTA...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAGCTGCTTTACAATTGTaGGCTTCATTGAATATGGCC +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSAALQL*ASLNMA
Trigger: GGCCATATTCAATGAAGCTCACAATTGTAAAGCAGC...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAAATTGGCTTTATACCTaGGCACCAAAGCTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSNWLYT*APKLKF
Trigger: GAACTTCAGCTTTGGTGCTCAGGTATAAAGCCAATT...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAAAATTGGGAGAGGAACTaGGACAACTTTTTACCCCAA +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKNWERN*DNFLPQ
Trigger: TTGGGGTAAAAAGTTGTCTCAGTTCCTCTCCCAATT...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR GCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGGCAGACGTCTCTTCTTaGTCTTCCTTTGGAATTTTT +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWADVSS*SSFGIF
Trigger: AAAAATTCCAAAGGAAGAGCAAGAAGAGACGTCTGC...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR GCA 90 bp AAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTTGTTGTCTATCCAAGTaGATCTGGAAATTGTTGTAT +
Preference number: 4 (lower is better)
Translates to: KILEITLVSHSGPVFFQCCCLSK*IWKLLY
Trigger: ATACAACAATTTCCAGATGCACTTGGATAGACAACA...ACATTGGAAGAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR GCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCATCTGGTTGTTCTCGCTaGTTTACAATTGTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSSGCSR*FTIVSF
Trigger: GAAGCTCACAATTGTAAAGCAGCGAGAACAACCAGA...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGAGTGGATATAGGACCTaGATAAGAAGATTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWSGYRT*IRRLCR
Trigger: TCTGCACAATCTTCTTATCCAGGTCCTATATCCACT...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CCA 90 bp CATATTCATAAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCACATTTGTTTGGGGCTaGAAAAGTATCTTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: HIHKILEITLVSHSGPVFTFVWG*KSIFSL
Trigger: CAAAGAGAAGATACTTTTCCAGCCCCAAACAAATGT...GAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTTATGAATATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATCCATTTCTACATCGGTaGTGTTGTTCATCAAGATTC +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHPFLHR*CCSSRF
Trigger: GAATCTTGATGAACAACACCACCGATGTAGAAATGG...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp CATGGTCTTCAGTTCTTCACATATGAGCTTGACAAGTCCATTCTTTATGTTACTCCATTTCTACATCGGTaGTGTTGTTCATCAAGATTC +
Preference number: 4 (lower is better)
Translates to: HGLQFFTYELDKSILYVTPFLHR*CCSSRF
Trigger: GAATCTTGATGAACAACACCACCGATGTAGAAATGG...AGTAACATAAAGAATGGACTTGTCAAGCTCATATGTGAAGAACTGAAGACCATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAAACCTTCAAAGGCTGGTaGAGAACTGCTTTAAAAGCT +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKTFKGW*RTALKA
Trigger: AGCTTTTAAAGCAGTTCTCCACCAGCCTTTGAAGGT...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATATGACCTTCAAAGGCTaGTGGAGAACTGCTTTAAAA +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHMTFKG*WRTALK
Trigger: TTTTAAAGCAGTTCTCCACCAGCCTTTGAAGGTCAT...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCATATGGGCAGAAGTTGTaGGTAGAAGAAAAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSYGQKL*VEEKLR
Trigger: TCTCAGCTTTTCTTCTACCCACAACTTCTGCCCATA...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGACATTAAATATTCCTTaGATCAGTTCTGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWTLNIP*ISSGGL
Trigger: CAGCCCACCAGAACTGATCCAAGGAATATTTAATGT...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCATCGGAAAACCATTTCTaGTTGTTCTCGCTGCTTTAC +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSSENHF*LFSLLY
Trigger: GTAAAGCAGCGAGAACAACCAGAAATGGTTTTCCGA...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGTGGTCCAACAAATTATaGATCACAGATTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWWSNKL*ITDWDS
Trigger: AGAATCCCAATCTGTGATTCATAATTTGTTGGACCA...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAGTAACATTGTACTCTTaGCATCTAACGTGTGTATGG +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSVTLYS*HLTCVW
Trigger: CCATACACACGTTAGATGTCAAGAGTACAATGTTAC...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCATACCCATTATCATTCTaGGTTGTTGAGAGTATGGGT +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSYPLSF*VVESMG
Trigger: ACCCATACTCTCAACAACTCAGAATGATAATGGGTA...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAAAATTGTGAGCTTCATTaGATATGGCCTCTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQNCELH*IWPLLL
Trigger: CAACAAAAGAGGCCATATTCAATGAAGCTCACAATT...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR GCA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAACATCATTCACACAGTTaGAAAATCCACACTGATATC +
Preference number: 4 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQHHSHS*KIHTDI
Trigger: GATATCAGTGTGGATTTTGCAACTGTGTGAATGATG...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR GCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAAGAGGCTTACTCTTTCTaGAATAATCCAAAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKEAYSF*NNPKWQ
Trigger: TTGCCACTTTGGATTATTGCAGAAAGAGTAAGCCTC...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR GCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAGCAGACGTCTCTTCTTaGTCTTCCTTTGGAATTTTT +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSADVSS*SSFGIF
Trigger: AAAAATTCCAAAGGAAGAGCAAGAAGAGACGTCTGC...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR GCA 90 bp CATATTCATAAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCATTTTCATTAGAGTCTaGAAACATGTCTGGAATCTG +
Preference number: 4 (lower is better)
Translates to: HIHKILEITLVSHSGPVFIFIRV*KHVWNL
Trigger: CAGATTCCAGACATGTTTGCAGACTCTAATGAAAAT...GAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTTATGAATATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGACATTTGTTTGGGGCTaGAAAAGTATCTTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWTFVWG*KSIFSL
Trigger: CAAAGAGAAGATACTTTTCCAGCCCCAAACAAATGT...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCACCATTTCTACATCGGTaGTGTTGTTCATCAAGATTC +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSPFLHR*CCSSRF
Trigger: GAATCTTGATGAACAACACCACCGATGTAGAAATGG...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGGCAATTCATGTACACTaGCAATACTTTCATGGAATC +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWAIHVH*QYFHGI
Trigger: GATTCCATGAAAGTATTGCCAGTGTACATGAATTGC...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAAACATTAAATATTCCTTaGATCAGTTCTGGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKTLNIP*ISSGGL
Trigger: CAGCCCACCAGAACTGATCCAAGGAATATTTAATGT...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCATGGTCCAACAAATTATaGATCACAGATTGGGATTCT +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSWSNKL*ITDWDS
Trigger: AGAATCCCAATCTGTGATTCATAATTTGTTGGACCA...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAAATGTCATATCTGTGTTaGTATGTGCAAAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKMSYLC*YVQKMA
Trigger: TGCCATCTTTTGCACATATCAACACAGATATGACAT...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAATGTCATATCTGTGTTaGTATGTGCAAAAGATGGCA +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSMSYLC*YVQKMA
Trigger: TGCCATCTTTTGCACATATCAACACAGATATGACAT...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR TCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAAATTGTGAGCTTCATTaGATATGGCCTCTTTTGTTG +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSNCELH*IWPLLL
Trigger: CAACAAAAGAGGCCATATTCAATGAAGCTCACAATT...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR GCA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATTGTTGTCTATCCAAGTaGATCTGGAAATTGTTGTAT +
Preference number: 4 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHCCLSK*IWKLLY
Trigger: ATACAACAATTTCCAGATGCACTTGGATAGACAACA...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR GCA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAAAGGTTATTAAAAGTCTaGTATGCAGACCTTAAGTTG +
Preference number: 4 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQRLLKV*YADLKL
Trigger: CAACTTAAGGTCTGCATAGCAGACTTTTAATAACCT...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAATTGGAAATAGAATGGTaGAACATCATTCACACAGTT +
Preference number: 4 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQLEIEW*NIIHTV
Trigger: AACTGTGTGAATGATGTTCCACCATTCTATTTCCAA...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGATGTTGGAAATAGAATaGTGGAACATCATTCACACA +
Preference number: 4 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWMLEIE*WNIIHT
Trigger: TGTGTGAATGATGTTCCACCATTCTATTTCCAACAT...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAACATTTGTTTGGGGCTaGAAAAGTATCTTCTCTTTG +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSTFVWG*KSIFSL
Trigger: CAAAGAGAAGATACTTTTCCAGCCCCAAACAAATGT...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAGCAATTCATGTACACTaGCAATACTTTCATGGAATC +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSAIHVH*QYFHGI
Trigger: GATTCCATGAAAGTATTGCCAGTGTACATGAATTGC...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
3UTR CAA 72 bp TTTTCCAGCATGGTCTTCAGTTCTTCACATATGAGCTaGACAAGTCCATTCTTTATGTTACTATATGAAACA +
Preference number: 4 (lower is better)
Translates to: FSSMVFSSSHMS*TSPFFMLLYET
Trigger: TGTTTCATATAGTAACATAAAGAATGGACTTGTCAAGCTCATATGTGAAGAACTGAAGACCATGCTGGAAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR GCA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAATTTTCATTAGAGTCTaGAAACATGTCTGGAATCTG +
Preference number: 4 (lower is better)
Translates to: VLNAISSWKVILKMSKKSIFIRV*KHVWNL
Trigger: CAGATTCCAGACATGTTTGCAGACTCTAATGAAAAT...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR GCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATGTTGTCTATCCAAGTaGATCTGGAAATTGTTGTAT +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKCCLSK*IWKLLY
Trigger: ATACAACAATTTCCAGATGCACTTGGATAGACAACA...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR GCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAAAGGTTATTAAAAGTCTaGTATGCAGACCTTAAGTTG +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKRLLKV*YADLKL
Trigger: CAACTTAAGGTCTGCATAGCAGACTTTTAATAACCT...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATTGGAAATAGAATGGTaGAACATCATTCACACAGTT +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKLEIEW*NIIHTV
Trigger: AACTGTGTGAATGATGTTCCACCATTCTATTTCCAA...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CCA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAAATGTTGGAAATAGAATaGTGGAACATCATTCACACA +
Preference number: 4 (lower is better)
Translates to: EVLNAISSWKVILKMSKKMLEIE*WNIIHT
Trigger: TGTGTGAATGATGTTCCACCATTCTATTTCCAACAT...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS CCA 90 bp CTTCCGAGCGCTGGCGGCTCTGCGCCTAGTGCCGGCAGCCCTCGGTaGCCGGGCTCCCGCTGCGGTCGCTTCTCCCGCCGCGCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: LPSAGGSAPSAGSPR*PGSRCGRFSRRASS
Trigger: GGAAGAGGCGCGGCGGGAGAAGCGACCGCAGCGGGAGCCCGGCCACCGAGGGCTGCCGGCACTAGGCGCAGAGCCGCCAGCGCTCGGAAG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000419654.6
CDS GCA 90 bp CCCTTAGCCTGGACTCACGCTCGGAGTTGCAGCTGGGCTGGGAACTaGCACGTCAAACCCTTTCTCGGCTGCGCGCCCCCAGCGCCGGGC +
Preference number: 5 (lower is better)
Translates to: PLAWTHARSCSWAGN*HVKPFLGCAPPAPG
Trigger: GCCCGGCGCTGGGGGCGCGCAGCCGAGAAAGGGTTTGACGTGGCAGTTCCCAGCCCAGCTGCAACTCCGAGCGTGAGTCCAGGCTAAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419654.6
CDS CCA 90 bp CGGCGTCCCCTTAGCCTGGACTCACGCTCGGAGTTGCAGCTGGGCTaGGAACTGCCACGTCAAACCCTTTCTCGGCTGCGCGCCCCCAGC +
Preference number: 5 (lower is better)
Translates to: RRPLSLDSRSELQLG*ELPRQTLSRLRAPS
Trigger: GCTGGGGGCGCGCAGCCGAGAAAGGGTTTGACGTGGCAGTTCCCAGCCCAGCTGCAACTCCGAGCGTGAGTCCAGGCTAAGGGGACGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419654.6
CDS GCA 90 bp TCTTCCCCGGCCGGCGTCCCCTTAGCCTGGACTCACGCTCGGAGTTaGAGCTGGGCTGGGAACTGCCACGTCAAACCCTTTCTCGGCTGC +
Preference number: 5 (lower is better)
Translates to: SSPAGVPLAWTHARS*SWAGNCHVKPFLGC
Trigger: GCAGCCGAGAAAGGGTTTGACGTGGCAGTTCCCAGCCCAGCTGCAACTCCGAGCGTGAGTCCAGGCTAAGGGGACGCCGGCCGGGGAAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419654.6
CDS CCA 90 bp GGAGGAGTCTGCAATGATGTGGCTGACAGAGGGCCAGGGGGTCCCTaGCTTGGAGGAGCCATGCCTGAACCTTTGGGGAGGGTGACCAGT +
Preference number: 5 (lower is better)
Translates to: GGVCNDVADRGPGGP*LGGAMPEPLGRVTS
Trigger: ACTGGTCACCCTCCCCAAAGGTTCAGGCATGGCTCCTCCAAGCCAGGGACCCCCTGGCCCTCTGTCAGCCACATCATTGCAGACTCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS-3UTR CAA 90 bp GGGAGGGATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCAGGGCCTGGAAATCTTaGGGGAGGGTGACCAGTGGC +
Preference number: 5 (lower is better)
Translates to: GRDLASGVGGINLSSSAGRAWKS*GRVTSG
Trigger: GCCACTGGTCACCCTCCCCAAAGATTTCCAGGCCCT...GCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATCCCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506622.5
ENST00000514561.5
CDS-3UTR CAA 90 bp GGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAGGGGGTCCCTGGCTaGGAGGAGCCATGCCTGAAC +
Preference number: 5 (lower is better)
Translates to: GLWCWWHKLVLLCWLYHSQGVPG*EEPCLN
Trigger: GTTCAGGCATGGCTCCTCCAAGCCAGGGACCCCCTG...AGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp GAAGCCTCCTGGGTAAGACAGTTGTGCGCCTGCCATCTGGGGACCAGAGTTGGCAGTTTGTCATCGTGCTaGAACTCCACGGTCACTGCC +
Preference number: 5 (lower is better)
Translates to: EASWVRQLCACHLGTRVGSLSSC*NSTVTA
Trigger: GGCAGTGACCGTGGAGTTCAAGCACGATGACAAACT...GCCAACTCTGGTCCCCAGATGGCAGGCGCACAACTGTCTTACCCAGGAGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CAA 90 bp GAAGCCTCCTGGGTAAGACAGTTGTGCGCCTGCCATCTGGGGACCAGAGTTGGCCTGGTGCTTCAGCAGTaGGCAAGGAAGAATGGAAGA +
Preference number: 5 (lower is better)
Translates to: EASWVRQLCACHLGTRVGLVLQQ*ARKNGR
Trigger: TCTTCCATTCTTCCTTGCCAACTGCTGAAGCACCAG...GCCAACTCTGGTCCCCAGATGGCAGGCGCACAACTGTCTTACCCAGGAGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CAA 90 bp GGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTTCCTGGGTAAGACAGTaGTGCGCCTGCCATCTGGGG +
Preference number: 5 (lower is better)
Translates to: GLWCWWHKLVLLCWLYHSSWVRQ*CACHLG
Trigger: CCCCAGATGGCAGGCGCACAACTGTCTTACCCAGGA...AGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS CCA 90 bp TGGAGATGCTGTGTGCGACGGATCCCCATAGTGCCCATAATGAGGTaGAGAAAGGCCTATTCCAGGCTGAGGCTGAGAATACGGAGGTGT +
Preference number: 5 (lower is better)
Translates to: WRCCVRRIPIVPIMR*RKAYSRLRLRIRRC
Trigger: ACACCTCCGTATTCTCAGCCTCAGCCTGGAATAGGCCTTTCTCCACCTCATTATGGGCACTATGGGGATCCGTCGCACACAGCATCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000280551.11
ENST00000419654.6
ENST00000503683.1
ENST00000505280.1
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp GAGGGTGACCAGTGGCATGAGCTCCATTCTGACCAAACTGATGGGGTCCAGGAGCCTAATTGCCTTCTCTaGCTGCAGCCTAGTTTTGGC +
Preference number: 5 (lower is better)
Translates to: EGDQWHELHSDQTDGVQEPNCLL*LQPSFG
Trigger: GCCAAAACTAGGCTGCAGCAAGAGAAGGCAATTAGG...CTCCTGGACCCCATCAGTTTGGTCAGAATGGAGCTCATGCCACTGGTCACCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CAA 90 bp GATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCGCTTCATCATACCTGTaGGAGATGCTGTGTGCGACG +
Preference number: 5 (lower is better)
Translates to: DLASGVGGINLSSSAGSIASSYL*EMLCAT
Trigger: CGTCGCACACAGCATCTCCAACAGGTATGATGAAGC...GATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000506622.5
ENST00000509818.5
CDS-3UTR CAA 90 bp TGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCCAGGGGGTCCCTGGCTaGGAGGAGCCATGCCTGAAC +
Preference number: 5 (lower is better)
Translates to: WKTVCCTTDESRTGISLVQGVPG*EEPCLN
Trigger: GTTCAGGCATGGCTCCTCCAAGCCAGGGACCCCCTG...GACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp GGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATGCTGGTACTGGGCATTaGGAGGAGGAGGCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: GGINLSSSAGSIILNHLDAGTGH*EEEAQR
Trigger: TCTCTGGGCCTCCTCCTCCAAATGCCCAGTACCAGC...ATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp GGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGGGCTGGTACTGGGCATTaGGAGGAGGAGGCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: GINLSSSAGSIILNHLDWAGTGH*EEEAQR
Trigger: TCTCTGGGCCTCCTCCTCCAAATGCCCAGTACCAGC...CCAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp GATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCGTTGGTGGCATAAACTaGTCCTCCTCTGCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: DLASGVGGINLSSSAGSIVGGIN*SSSAGS
Trigger: AGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAAC...GATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp GGGAGGGATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCAGGACTGGCATTTCCTaGGTCTTGTATCATGCAATC +
Preference number: 5 (lower is better)
Translates to: GRDLASGVGGINLSSSAGRTGIS*VLYHAI
Trigger: GATTGCATGATACAAGACCAAGGAAATGCCAGTCCT...GCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATCCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp GAGGGTGACCAGTGGCATGAGCTCCATTCTGACCAAACTGATGGGGTCCAGGAGAAAGGGGACTCTCATTaGAAGGAATGGTGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: EGDQWHELHSDQTDGVQEKGDSH*KEWWQR
Trigger: CCTTTGCCACCATTCCTTCAAATGAGAGTCCCCTTT...CTCCTGGACCCCATCAGTTTGGTCAGAATGGAGCTCATGCCACTGGTCACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CAA 90 bp GTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATAGACAGGGGGTCCCTGGCTaGGAGGAGCCATGCCTGAAC +
Preference number: 5 (lower is better)
Translates to: VSHSGPVFFQCGPDVGNRQGVPG*EEPCLN
Trigger: GTTCAGGCATGGCTCCTCCAAGCCAGGGACCCCCTG...TCTATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp TCTGACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCAGCTGGTACTGGGCATTaGGAGGAGGAGGCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: SDVHGKQYVVQRMNRGLAAGTGH*EEEAQR
Trigger: TCTCTGGGCCTCCTCCTCCAAATGCCCAGTACCAGC...TGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp ATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGGGCTTCCTGGGTAAGACAGTaGTGCGCCTGCCATCTGGGG +
Preference number: 5 (lower is better)
Translates to: INLSSSAGSIILNHLDWASWVRQ*CACHLG
Trigger: CCCCAGATGGCAGGCGCACAACTGTCTTACCCAGGA...AGCCCAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp TCTGACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCAGAGGATGCCACATTGTaGACAGGTGGAGGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: SDVHGKQYVVQRMNRGLAEDATL*TGGGPG
Trigger: TCCAGGCCCTCCACCTGTCAACAATGTGGCATCCTC...TGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506622.5
ENST00000514561.5
CDS-3UTR CAA 90 bp GGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTTCCTGGGTAAGACAGTaGTGCGCCTGCCATCTGGGG +
Preference number: 5 (lower is better)
Translates to: GKQYVVQRMNRGLAFPWSSWVRQ*CACHLG
Trigger: CCCCAGATGGCAGGCGCACAACTGTCTTACCCAGGA...AGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp TGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGTCCACGGTCACTGCCTaGTCACAATCGATGGCAGCC +
Preference number: 5 (lower is better)
Translates to: WHKLVLLCWLYHSQSPGLSTVTA*SQSMAA
Trigger: GGCTGCCATCGATTGTGACAAGGCAGTGACCGTGGA...CAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS CCA 90 bp TTGATTTCTCAAAGGGAATGCAGCGTCTTAGATAGCCCAGAAATCTaGTTAGTGGTCTACAGGCCAATCCAGCTGCACGTGGCATCCAGG +
Preference number: 5 (lower is better)
Translates to: LISQRECSVLDSPEI*LVVYRPIQLHVASR
Trigger: CCTGGATGCCACGTGCAGCTGGATTGGCCTGTAGACCACTAACCAGATTTCTGGGCTATCTAAGACGCTGCATTCCCTTTGAGAAATCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS-3UTR CAA 90 bp GGGAGGGATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTGTAGCCACGTAACCTaGTTGACTCATTATGAAAAT +
Preference number: 5 (lower is better)
Translates to: GRDLASGVGGINLSSSAGCSHVT*LTHYEN
Trigger: ATTTTCATAATGAGTCAACAAGGTTACGTGGCTACA...GCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATCCCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp GGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTTGGTGGTGGAAGAACTaGAGATCCAGGCTGCAAAAT +
Preference number: 5 (lower is better)
Translates to: GLWCWWHKLVLLCWLYHSWWWKN*RSRLQN
Trigger: ATTTTGCAGCCTGGATCTCAAGTTCTTCCACCACCA...AGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp CACTCTCGCCGTGATTTACCAAGTAAAGGGGACTCTCATTTGAAGGAATGGTGGGTTGGTGGCATAAACTaGTCCTCCTCTGCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: HSRRDLPSKGDSHLKEWWVGGIN*SSSAGS
Trigger: AGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAAC...CCACCATTCCTTCAAATGAGAGTCCCCTTTACTTGGTAAATCACGGCGAGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp GGGAGGGATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTTCACATATGAGCTaGACAAGTCCATTCTTTATG +
Preference number: 5 (lower is better)
Translates to: GRDLASGVGGINLSSSAGSSHMS*TSPFFM
Trigger: CATAAAGAATGGACTTGTCAAGCTCATATGTGAAGA...GCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATCCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp TCTATCCAAGTGCATCTGGAAATTGTTGTATTTGTAAAGGGTTCCTCCAGTGAGAGGGCCTGGAAATCTTaGGGGAGGGTGACCAGTGGC +
Preference number: 5 (lower is better)
Translates to: SIQVHLEIVVFVKGSSSERAWKS*GRVTSG
Trigger: GCCACTGGTCACCCTCCCCAAAGATTTCCAGGCCCT...CTCACTGGAGGAACCCTTTACAAATACAACAATTTCCAGATGCACTTGGATAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CAA 90 bp AAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTTGGAGGATGCCACATTGTaGACAGGTGGAGGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: KTVCCTTDESRTGISLVLEDATL*TGGGPG
Trigger: TCCAGGCCCTCCACCTGTCAACAATGTGGCATCCTC...CAAGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506622.5
ENST00000514561.5
CDS-3UTR CAA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAACAGGGGGTCCCTGGCTaGGAGGAGCCATGCCTGAAC +
Preference number: 5 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQQGVPG*EEPCLN
Trigger: GTTCAGGCATGGCTCCTCCAAGCCAGGGACCCCCTG...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CAA 90 bp CATATTCATAAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCGCCATGCCTGAACCTTaGGGGAGGGTGACCAGTGGC +
Preference number: 5 (lower is better)
Translates to: HIHKILEITLVSHSGPVFAMPEP*GRVTSG
Trigger: GCCACTGGTCACCCTCCCCAAAGGTTCAGGCATGGC...GAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTTATGAATATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS-3UTR CAA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGGACTCACGCTCGGAGTaGCAGCTGGGCTGGGAACTG +
Preference number: 5 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWDSRSE*QLGWEL
Trigger: CAGTTCCCAGCCCAGCTGCAACTCCGAGCGTGAGTC...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CAA 90 bp GACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTGCTTCATCATACCTGTaGGAGATGCTGTGTGCGACG +
Preference number: 5 (lower is better)
Translates to: DVHGKQYVVQRMNRGLAFASSYL*EMLCAT
Trigger: CGTCGCACACAGCATCTCCAACAGGTATGATGAAGC...AAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000506622.5
ENST00000509818.5
CDS-3UTR CAA 90 bp GGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGGTGGTGGAAGAACTaGAGATCCAGGCTGCAAAAT +
Preference number: 5 (lower is better)
Translates to: GGINLSSSAGSIILNHLDWWWKN*RSRLQN
Trigger: ATTTTGCAGCCTGGATCTCAAGTTCTTCCACCACCA...ATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp CTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATGTTGGTGGCATAAACTaGTCCTCCTCTGCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: LVSHSGPVFFQCGPDVGNVGGIN*SSSAGS
Trigger: AGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAAC...ATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAACCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp ATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGGGCTATGGTGGCAAAGGGCTaGATGACAGCAGCTAATGGA +
Preference number: 5 (lower is better)
Translates to: INLSSSAGSIILNHLDWAMVAKG*MTAANG
Trigger: TCCATTAGCTGCTGTCATCAAGCCCTTTGCCACCAT...AGCCCAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp GATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCGAGGTCGTTCAAAAATaGTTGTCTATCCAAGTGCAT +
Preference number: 5 (lower is better)
Translates to: DLASGVGGINLSSSAGSIEVVQK*LSIQVH
Trigger: ATGCACTTGGATAGACAACAATTTTTGAACGACCTC...GATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CAA 90 bp CACTCTCGCCGTGATTTACCAAGTAAAGGGGACTCTCATTTGAAGGAATGGTGGCTGTCTTCACTGAGTTaGTCATCGTGCTTGAACTCC +
Preference number: 5 (lower is better)
Translates to: HSRRDLPSKGDSHLKEWWLSSLS*SSCLNS
Trigger: GGAGTTCAAGCACGATGACAAACTCAGTGAAGACAG...CCACCATTCCTTCAAATGAGAGTCCCCTTTACTTGGTAAATCACGGCGAGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CAA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGAGGGCCTGGAAATCTTaGGGGAGGGTGACCAGTGGC +
Preference number: 5 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWRAWKS*GRVTSG
Trigger: GCCACTGGTCACCCTCCCCAAAGATTTCCAGGCCCT...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CAA 90 bp GACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCATCTGGTCTGTACATaGGTAGAGGCAAAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: DVHGKQYVVQRMNRGLAFHLVCT*VEAKVR
Trigger: CCTCACCTTTGCCTCTACCAATGTACAGACCAGATG...AAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp TGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGAAAGGGGACTCTCATTaGAAGGAATGGTGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: WHKLVLLCWLYHSQSPGLKGDSH*KEWWQR
Trigger: CCTTTGCCACCATTCCTTCAAATGAGAGTCCCCTTT...CAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp GATCTGGCCTCTGGTGTTGGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCCGTATATACCACATTTaGCTTATCCATTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: DLASGVGGINLSSSAGSIRIYHI*LIHSSS
Trigger: GGAAGAAGAATGGATAAGCAAAATGTGGTATATACG...GATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAACACCAGAGGCCAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CAA 90 bp ATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGGGCTAGCTCCTTGATGGTCTaGCTTGGGTCAAGGAAACTT +
Preference number: 5 (lower is better)
Translates to: INLSSSAGSIILNHLDWASSLMV*LGSRKL
Trigger: AAGTTTCCTTGACCCAAGCAAGACCATCAAGGAGCT...AGCCCAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CAA 90 bp GACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTTCAGTTTTCTTCCTGTaGGAGATGCTGTGTGCGACG +
Preference number: 5 (lower is better)
Translates to: DVHGKQYVVQRMNRGLAFSVFFL*EMLCAT
Trigger: CGTCGCACACAGCATCTCCAACAGGAAGAAAACTGA...AAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CAA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATGAGGATGCCACATTGTaGACAGGTGGAGGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHEDATL*TGGGPG
Trigger: TCCAGGCCCTCCACCTGTCAACAATGTGGCATCCTC...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CAA 90 bp CTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATTGGTGGTGGAAGAACTaGAGATCCAGGCTGCAAAAT +
Preference number: 5 (lower is better)
Translates to: LVSHSGPVFFQCGPDVGNWWWKN*RSRLQN
Trigger: ATTTTGCAGCCTGGATCTCAAGTTCTTCCACCACCA...ATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp AAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTTGCATCTGGTCTGTACATaGGTAGAGGCAAAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: KTVCCTTDESRTGISLVLHLVCT*VEAKVR
Trigger: CCTCACCTTTGCCTCTACCAATGTACAGACCAGATG...CAAGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAGCTGGTACTGGGCATTaGGAGGAGGAGGCCCAGAGA +
Preference number: 5 (lower is better)
Translates to: VLNAISSWKVILKMSKKSAGTGH*EEEAQR
Trigger: TCTCTGGGCCTCCTCCTCCAAATGCCCAGTACCAGC...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CAA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCATCCTGGGTAAGACAGTaGTGCGCCTGCCATCTGGGG +
Preference number: 5 (lower is better)
Translates to: VLNAISSWKVILKMSKKSSWVRQ*CACHLG
Trigger: CCCCAGATGGCAGGCGCACAACTGTCTTACCCAGGA...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CAA 90 bp TGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGAGGACTGGCATTTCCTaGGTCTTGTATCATGCAATC +
Preference number: 5 (lower is better)
Translates to: WHKLVLLCWLYHSQSPGLRTGIS*VLYHAI
Trigger: GATTGCATGATACAAGACCAAGGAAATGCCAGTCCT...CAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp AAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTTGATGGTGGCAAAGGGCTaGATGACAGCAGCTAATGGA +
Preference number: 5 (lower is better)
Translates to: KTVCCTTDESRTGISLVLMVAKG*MTAANG
Trigger: TCCATTAGCTGCTGTCATCAAGCCCTTTGCCACCAT...CAAGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp CACTCTCGCCGTGATTTACCAAGTAAAGGGGACTCTCATTTGAAGGAATGGTGGTGCAGACGTCTCTTCTaGCTCTTCCTTTGGAATTTT +
Preference number: 5 (lower is better)
Translates to: HSRRDLPSKGDSHLKEWWCRRLF*LFLWNF
Trigger: AAAATTCCAAAGGAAGAGCAAGAAGAGACGTCTGCA...CCACCATTCCTTCAAATGAGAGTCCCCTTTACTTGGTAAATCACGGCGAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp TGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGTCTACATCGGTGGTGTaGTTCATCAAGATTCCACCA +
Preference number: 5 (lower is better)
Translates to: WHKLVLLCWLYHSQSPGLSTSVV*FIKIPP
Trigger: TGGTGGAATCTTGATGAACAACACCACCGATGTAGA...CAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CAA 90 bp CACTCTCGCCGTGATTTACCAAGTAAAGGGGACTCTCATTTGAAGGAATGGTGGAATCCGAAGTCTTCTTaGACCACTGATTGTCGTGTA +
Preference number: 5 (lower is better)
Translates to: HSRRDLPSKGDSHLKEWWNPKSS*TTDCRV
Trigger: TACACGACAATCAGTGGTCAAAGAAGACTTCGGATT...CCACCATTCCTTCAAATGAGAGTCCCCTTTACTTGGTAAATCACGGCGAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CAA 90 bp AAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGCTCGCTGGAGGACTTaGTCCAAATGCTTTGGGAGA +
Preference number: 5 (lower is better)
Translates to: KILEITLVSHSGPVFFQCARWRT*SKCFGR
Trigger: TCTCCCAAAGCATTTGGACAAAGTCCTCCAGCGAGC...ACATTGGAAGAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS TCA 90 bp GCTGTCTCTGGTATGCTCGTTCATCAGTTGAGATCTCTGGTCTGCTaGGTAGTACACAGTTTTTCAACAAGCAATTCATGTACACTGGCA +
Preference number: 5 (lower is better)
Translates to: AVSGMLVHQLRSLVC*VVHSFSTSNSCTLA
Trigger: TGCCAGTGTACATGAATTGCTTGTTGAAAAACTGTGTACTACTCAGCAGACCAGAGATCTCAACTGATGAACGAGCATACCAGAGACAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280551.11
ENST00000505134.5
ENST00000511481.5
ENST00000511715.1
CDS TCA 90 bp GAAAGATTTCTACATTCTTCTGAGTATGCAGTTCAGCACCAGGGATaGGTCCAGAGCATAAGAACTGAATTCAGTTCCCATCTCTGCCAC +
Preference number: 5 (lower is better)
Translates to: ERFLHSSEYAVQHQG*VQSIRTEFSSHLCH
Trigger: GTGGCAGAGATGGGAACTGAATTCAGTTCTTATGCTCTGGACTCATCCCTGGTGCTGAACTGCATACTCAGAAGAATGTAGAAATCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS GCA 90 bp AGGAAATACCAGTATGCTGATATAAGCACAGACCTACCAATCTGCTaGCTTGTGGTAGAGACACTGGCTATTTCCTGTGGATGTTCAGTT +
Preference number: 5 (lower is better)
Translates to: RKYQYADISTDLPIC*LVVETLAISCGCSV
Trigger: AACTGAACATCCACAGGAAATAGCCAGTGTCTCTACCACAAGGCAGCAGATTGGTAGGTCTGTGCTTATATCAGCATACTGGTATTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS GCA 90 bp TCAAGGAAATACCAGTATGCTGATATAAGCACAGACCTACCAATCTaGTGCCTTGTGGTAGAGACACTGGCTATTTCCTGTGGATGTTCA +
Preference number: 5 (lower is better)
Translates to: SRKYQYADISTDLPI*CLVVETLAISCGCS
Trigger: TGAACATCCACAGGAAATAGCCAGTGTCTCTACCACAAGGCAGCAGATTGGTAGGTCTGTGCTTATATCAGCATACTGGTATTTCCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS CCA 90 bp GAACTGAATAATCACATACAAGTCAAAATAACACACTGTACCTGTTaGAGATGCTGTGTGCGACGGATCCCCATAGTGCCCATAATGAGG +
Preference number: 5 (lower is better)
Translates to: ELNNHIQVKITHCTC*RCCVRRIPIVPIMR
Trigger: CCTCATTATGGGCACTATGGGGATCCGTCGCACACAGCATCTCCAACAGGTACAGTGTGTTATTTTGACTTGTATGTGATTATTCAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505280.1
CDS CCA 90 bp CCTACCAATCTGCTGCCTTGTGGTAGAGACACTGGCTATTTCCTGTaGATGTTCAGTTCAGCAACTATGCATTCAGCATTTACTATGTCA +
Preference number: 5 (lower is better)
Translates to: PTNLLPCGRDTGYFL*MFSSATMHSAFTMS
Trigger: TGACATAGTAAATGCTGAATGCATAGTTGCTGAACTGAACATCCACAGGAAATAGCCAGTGTCTCTACCACAAGGCAGCAGATTGGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS-3UTR CAA 90 bp GTTATATGTGATAAAACCCACTCGAATTGCAGACGTCTCTTCTTGCTCTTCCTTATGGTGGCAAAGGGCTaGATGACAGCAGCTAATGGA +
Preference number: 5 (lower is better)
Translates to: VICDKTHSNCRRLFLLFLMVAKG*MTAANG
Trigger: TCCATTAGCTGCTGTCATCAAGCCCTTTGCCACCAT...AAGGAAGAGCAAGAAGAGACGTCTGCAATTCGAGTGGGTTTTATCACATATAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCCACGGTCACTGCCTaGTCACAATCGATGGCAGCC +
Preference number: 5 (lower is better)
Translates to: EVLNAISSWKVILKMSKKSTVTA*SQSMAA
Trigger: GGCTGCCATCGATTGTGACAAGGCAGTGACCGTGGA...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp GGTGGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATATGGTGGGTATGATTTaGGTCACCTTTCTAAGAAAG +
Preference number: 5 (lower is better)
Translates to: GGINLSSSAGSIILNHLDMVGMI*VTFLRK
Trigger: CTTTCTTAGAAAGGTGACCAAAATCATACCCACCAT...ATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS TCA 90 bp GATGCCAACAGCCAATGCATCACTGTGAGTTGGCCAGAGAACATGTaGGTTAGAATGTTTCACCATAAACCTCAAGTGTCAGGAAAAGTT +
Preference number: 5 (lower is better)
Translates to: DANSQCITVSWPENM*VRMFHHKPQVSGKV
Trigger: AACTTTTCCTGACACTTGAGGTTTATGGTGAAACATTCTAACTCACATGTTCTCTGGCCAACTCACAGTGATGCATTGGCTGTTGGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS TCA 90 bp TGTTTGCTTCTCAGCAAGAAGATGCCAACAGCCAATGCATCACTGTaGGTTGGCCAGAGAACATGTGAGTTAGAATGTTTCACCATAAAC +
Preference number: 5 (lower is better)
Translates to: CLLLSKKMPTANASL*VGQRTCELECFTIN
Trigger: GTTTATGGTGAAACATTCTAACTCACATGTTCTCTGGCCAACTCACAGTGATGCATTGGCTGTTGGCATCTTCTTGCTGAGAAGCAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS-3UTR CAA 90 bp GGCATAAACTTGTCCTCCTCTGCTGGCTCTATCATTCTCAATCACCTGGATTGGTGTAGCCACGTAACCTaGTTGACTCATTATGAAAAT +
Preference number: 5 (lower is better)
Translates to: GINLSSSAGSIILNHLDWCSHVT*LTHYEN
Trigger: ATTTTCATAATGAGTCAACAAGGTTACGTGGCTACA...CCAATCCAGGTGATTGAGAATGATAGAGCCAGCAGAGGAGGACAAGTTTATGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATGCTTCATCATACCTGTaGGAGATGCTGTGTGCGACG +
Preference number: 5 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHASSYL*EMLCAT
Trigger: CGTCGCACACAGCATCTCCAACAGGTATGATGAAGC...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CAA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGGTTGGTGGCATAAACTaGTCCTCCTCTGCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWVGGIN*SSSAGS
Trigger: AGAGCCAGCAGAGGAGGACAAGTTTATGCCACCAAC...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CAA 90 bp GACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTTGCAGACGTCTCTTCTaGCTCTTCCTTTGGAATTTT +
Preference number: 5 (lower is better)
Translates to: DVHGKQYVVQRMNRGLAFCRRLF*LFLWNF
Trigger: AAAATTCCAAAGGAAGAGCAAGAAGAGACGTCTGCA...AAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp TCTGACGTGCATGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCAATGAGTCATAGACATTaGTTTGGGGCTGGAAAAGTA +
Preference number: 5 (lower is better)
Translates to: SDVHGKQYVVQRMNRGLAMSHRH*FGAGKV
Trigger: TACTTTTCCAGCCCCAAACAAATGTCTATGACTCAT...TGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCATGCACGTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CAA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATAGTTTGTCATCGTGCTaGAACTCCACGGTCACTGCC +
Preference number: 5 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHSLSSC*NSTVTA
Trigger: GGCAGTGACCGTGGAGTTCAAGCACGATGACAAACT...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGAGTTTGTCATCGTGCTaGAACTCCACGGTCACTGCC +
Preference number: 5 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWSLSSC*NSTVTA
Trigger: GGCAGTGACCGTGGAGTTCAAGCACGATGACAAACT...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp TGGCTGGTGTTCAAACAGCTTTTAGGAAGTGATCCTTCAGTTGCATCTTACAAATTGCTGCAGAAGGACTaGCACAATTCTTCCGGTAAC +
Preference number: 5 (lower is better)
Translates to: WLVFKQLLGSDPSVASYKLLQKD*HNSSGN
Trigger: GTTACCGGAAGAATTGTGCAAGTCCTTCTGCAGCAA...TTTGTAAGATGCAACTGAAGGATCACTTCCTAAAAGCTGTTTGAACACCAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CAA 90 bp TCTATCCAAGTGCATCTGGAAATTGTTGTATTTGTAAAGGGTTCCTCCAGTGAGTCCATAGACACCTGGTaGCTTCCTCCTTTTGGCTAT +
Preference number: 5 (lower is better)
Translates to: SIQVHLEIVVFVKGSSSESIDTW*LPPFGY
Trigger: ATAGCCAAAAGGAGGAAGCAACCAGGTGTCTATGGA...CTCACTGGAGGAACCCTTTACAAATACAACAATTTCCAGATGCACTTGGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS GCA 90 bp TCCGGCATTAAAACAAACTACCAAATGTTGATTTCTCAAAGGGAATaGAGCGTCTTAGATAGCCCAGAAATCTGGTTAGTGGTCTACAGG +
Preference number: 5 (lower is better)
Translates to: SGIKTNYQMLISQRE*SVLDSPEIWLVVYR
Trigger: CCTGTAGACCACTAACCAGATTTCTGGGCTATCTAAGACGCTGCATTCCCTTTGAGAAATCAACATTTGGTAGTTTGTTTTAATGCCGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS CCA 90 bp ATATCTGTGTTGATATGTGCAAAAGATGGCACATTAAATATTCCTTaGATCAGTTCTGGTGGGCTGCTTACTCCCAACCACAGGAACATG +
Preference number: 5 (lower is better)
Translates to: ISVLICAKDGTLNIP*ISSGGLLTPNHRNM
Trigger: CATGTTCCTGTGGTTGGGAGTAAGCAGCCCACCAGAACTGATCCAAGGAATATTTAATGTGCCATCTTTTGCACATATCAACACAGATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280551.11
ENST00000505134.5
ENST00000511481.5
ENST00000511715.1
CDS CCA 90 bp CACTTCAGGCAGCAATGTCATATCTGTGTTGATATGTGCAAAAGATaGCACATTAAATATTCCTTGGATCAGTTCTGGTGGGCTGCTTAC +
Preference number: 5 (lower is better)
Translates to: HFRQQCHICVDMCKR*HIKYSLDQFWWAAY
Trigger: GTAAGCAGCCCACCAGAACTGATCCAAGGAATATTTAATGTGCCATCTTTTGCACATATCAACACAGATATGACATTGCTGCCTGAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280551.11
ENST00000505134.5
ENST00000511481.5
CDS CCA 90 bp AACCTAGGAGATGGGATCTGTGTCTTAGGCATTTCTACCACTCCATaGTACCACCAAAATGCTTTGTTTGTGAATCAAGAGTCAGTTCTT +
Preference number: 5 (lower is better)
Translates to: NLGDGICVLGISTTP*YHQNALFVNQESVL
Trigger: AAGAACTGACTCTTGATTCACAAACAAAGCATTTTGGTGGTACCATGGAGTGGTAGAAATGCCTAAGACACAGATCCCATCTCCTAGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514418.1
CDS-3UTR CAA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGCATCTGGTCTGTACATaGGTAGAGGCAAAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWHLVCT*VEAKVR
Trigger: CCTCACCTTTGCCTCTACCAATGTACAGACCAGATG...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CAA 90 bp AAGATCCTAGAGATAACTCTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTAGGACTGGCATTTCCTaGGTCTTGTATCATGCAATC +
Preference number: 5 (lower is better)
Translates to: KILEITLVSHSGPVFFQCRTGIS*VLYHAI
Trigger: GATTGCATGATACAAGACCAAGGAAATGCCAGTCCT...ACATTGGAAGAAGACTGGACCACTATGAGAAACCAGAGTTATCTCTAGGATCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp GGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTGTCGTTCAAAAATTGTaGTCTATCCAAGTGCATCTG +
Preference number: 5 (lower is better)
Translates to: GKQYVVQRMNRGLAFPWSVVQKL*SIQVHL
Trigger: CAGATGCACTTGGATAGACAACAATTTTTGAACGAC...AGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS TCA 90 bp TATGGCCTCTTTTGTTGGATAATACCCATTATCATTCTGAGTTGTTaGGAGTATGGGTTTCCCACTTCAGGCAGCAATGTCATATCTGTG +
Preference number: 5 (lower is better)
Translates to: YGLFCWIIPIIILSC*EYGFPTSGSNVISV
Trigger: CACAGATATGACATTGCTGCCTGAAGTGGGAAACCCATACTCTCAACAACTCAGAATGATAATGGGTATTATCCAACAAAAGAGGCCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280551.11
ENST00000505134.5
ENST00000511481.5
CDS-3UTR CAA 90 bp GGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCTAGCCACGTAACCTTGTaGACTCATTATGAAAATATC +
Preference number: 5 (lower is better)
Translates to: GKQYVVQRMNRGLAFPWSSHVTL*THYENI
Trigger: GATATTTTCATAATGAGTCAACAAGGTTACGTGGCT...AGACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp TGGAAAACAGTATGTTGTACAACGGATGAATCGAGGACTGGCATTTCCTTGGTCAGCCACGTAACCTTGTaGACTCATTATGAAAATATC +
Preference number: 5 (lower is better)
Translates to: WKTVCCTTDESRTGISLVSHVTL*THYENI
Trigger: GATATTTTCATAATGAGTCAACAAGGTTACGTGGCT...GACCAAGGAAATGCCAGTCCTCGATTCATCCGTTGTACAACATACTGTTTTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp CTGGTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATTGTAGCCACGTAACCTaGTTGACTCATTATGAAAAT +
Preference number: 5 (lower is better)
Translates to: LVSHSGPVFFQCGPDVGNCSHVT*LTHYEN
Trigger: ATTTTCATAATGAGTCAACAAGGTTACGTGGCTACA...ATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATTGGTGGTGGAAGAACTaGAGATCCAGGCTGCAAAAT +
Preference number: 5 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHWWWKN*RSRLQN
Trigger: ATTTTGCAGCCTGGATCTCAAGTTCTTCCACCACCA...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CAA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAATGGTGGCAAAGGGCTaGATGACAGCAGCTAATGGA +
Preference number: 5 (lower is better)
Translates to: VLNAISSWKVILKMSKKSMVAKG*MTAANG
Trigger: TCCATTAGCTGCTGTCATCAAGCCCTTTGCCACCAT...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CAA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGAAAGGGGACTCTCATTaGAAGGAATGGTGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWKGDSH*KEWWQR
Trigger: CCTTTGCCACCATTCCTTCAAATGAGAGTCCCCTTT...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CAA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCACTGGTGCTTCAGCAGTaGGCAAGGAAGAATGGAAGA +
Preference number: 5 (lower is better)
Translates to: VLNAISSWKVILKMSKKSLVLQQ*ARKNGR
Trigger: TCTTCCATTCTTCCTTGCCAACTGCTGAAGCACCAG...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAACTGGTGCTTCAGCAGTaGGCAAGGAAGAATGGAAGA +
Preference number: 5 (lower is better)
Translates to: EVLNAISSWKVILKMSKKLVLQQ*ARKNGR
Trigger: TCTTCCATTCTTCCTTGCCAACTGCTGAAGCACCAG...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATCTGTCTTCACTGAGTTaGTCATCGTGCTTGAACTCC +
Preference number: 5 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHLSSLS*SSCLNS
Trigger: GGAGTTCAAGCACGATGACAAACTCAGTGAAGACAG...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATTTGCTGCAGAAGGACTaGCACAATTCTTCCGGTAAC +
Preference number: 5 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHLLQKD*HNSSGN
Trigger: GTTACCGGAAGAATTGTGCAAGTCCTTCTGCAGCAA...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAAGTGTATGGGCAGAAGTaGTGGGTAGAAGAAAAGCTG +
Preference number: 5 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQVYGQK*WVEEKL
Trigger: CAGCTTTTCTTCTACCCACAACTTCTGCCCATACAC...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS TCA 90 bp CTCTACTGGAATCCACTATCAGAGTCAAACAATAGCCATCGGCAGTaGTGCTCACACAACAATGGTCTACAAATAACGTTTGCAATAAAT +
Preference number: 5 (lower is better)
Translates to: LYWNPLSESNNSHRQ*CSHNNGLQITFAIN
Trigger: ATTTATTGCAAACGTTATTTGTAGACCATTGTTGTGTGAGCATCACTGCCGATGGCTATTGTTTGACTCTGATAGTGGATTCCAGTAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS TCA 90 bp CTTTGTTTCATTTTGTTGATGAAAGTCAAGGAAATACCAGTATGCTaGTATAAGCACAGACCTACCAATCTGCTGCCTTGTGGTAGAGAC +
Preference number: 5 (lower is better)
Translates to: LCFILLMKVKEIPVC*YKHRPTNLLPCGRD
Trigger: GTCTCTACCACAAGGCAGCAGATTGGTAGGTCTGTGCTTATATCAGCATACTGGTATTTCCTTGACTTTCATCAACAAAATGAAACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS-3UTR CAA 90 bp GTTTCTCATAGTGGTCCAGTCTTCTTCCAATGTGGTCCAGATGTTGGAAATAGAAGCCACGTAACCTTGTaGACTCATTATGAAAATATC +
Preference number: 5 (lower is better)
Translates to: VSHSGPVFFQCGPDVGNRSHVTL*THYENI
Trigger: GATATTTTCATAATGAGTCAACAAGGTTACGTGGCT...TCTATTTCCAACATCTGGACCACATTGGAAGAAGACTGGACCACTATGAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000509818.5
ENST00000514561.5
CDS-3UTR CAA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGAGGACTGGCATTTCCTaGGTCTTGTATCATGCAATC +
Preference number: 5 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWRTGIS*VLYHAI
Trigger: GATTGCATGATACAAGACCAAGGAAATGCCAGTCCT...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CAA 90 bp ATCCATTCTTCTTCCATAGACACCTGGTTGCTTCCTCCTTTTGGCTATTGTGAATCTTCACATATGAGCTaGACAAGTCCATTCTTTATG +
Preference number: 5 (lower is better)
Translates to: IHSSSIDTWLLPPFGYCESSHMS*TSPFFM
Trigger: CATAAAGAATGGACTTGTCAAGCTCATATGTGAAGA...TTCACAATAGCCAAAAGGAGGAAGCAACCAGGTGTCTATGGAAGAAGAATGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514561.5
CDS-3UTR CAA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAATCTACATCGGTGGTGTaGTTCATCAAGATTCCACCA +
Preference number: 5 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQSTSVV*FIKIPP
Trigger: TGGTGGAATCTTGATGAACAACACCACCGATGTAGA...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCACTGTCTTCACTGAGTTaGTCATCGTGCTTGAACTCC +
Preference number: 5 (lower is better)
Translates to: VLNAISSWKVILKMSKKSLSSLS*SSCLNS
Trigger: GGAGTTCAAGCACGATGACAAACTCAGTGAAGACAG...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATTGCTGCAGAAGGACTaGCACAATTCTTCCGGTAAC +
Preference number: 5 (lower is better)
Translates to: EVLNAISSWKVILKMSKKLLQKD*HNSSGN
Trigger: GTTACCGGAAGAATTGTGCAAGTCCTTCTGCAGCAA...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAGTGTATGGGCAGAAGTaGTGGGTAGAAGAAAAGCTG +
Preference number: 5 (lower is better)
Translates to: VLNAISSWKVILKMSKKSVYGQK*WVEEKL
Trigger: CAGCTTTTCTTCTACCCACAACTTCTGCCCATACAC...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS TCA 90 bp TATGGCCTCTTTTGTTGGATAATACCCATTATCATTCTGAGTTGTTaGGAGTATGGGTTTCCCACTTCAGGCAGCAATGTCTTAGATTTA +
Preference number: 5 (lower is better)
Translates to: YGLFCWIIPIIILSC*EYGFPTSGSNVLDL
Trigger: TAAATCTAAGACATTGCTGCCTGAAGTGGGAAACCCATACTCTCAACAACTCAGAATGATAATGGGTATTATCCAACAAAAGAGGCCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502830.1
CDS CCA 90 bp CTTTTGTTGGATAATACCCATTATCATTCTGAGTTGTTGAGAGTATaGGTTTCCCACTTCAGGCAGCAATGTCATATCTGTGTTGATATG +
Preference number: 5 (lower is better)
Translates to: LLLDNTHYHSELLRV*VSHFRQQCHICVDM
Trigger: CATATCAACACAGATATGACATTGCTGCCTGAAGTGGGAAACCCATACTCTCAACAACTCAGAATGATAATGGGTATTATCCAACAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280551.11
ENST00000505134.5
ENST00000511481.5
CDS-3UTR CAA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATTGCAGACGTCTCTTCTaGCTCTTCCTTTGGAATTTT +
Preference number: 5 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHCRRLF*LFLWNF
Trigger: AAAATTCCAAAGGAAGAGCAAGAAGAGACGTCTGCA...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAATGCAGACGTCTCTTCTaGCTCTTCCTTTGGAATTTT +
Preference number: 5 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQCRRLF*LFLWNF
Trigger: AAAATTCCAAAGGAAGAGCAAGAAGAGACGTCTGCA...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCATCTACATCGGTGGTGTaGTTCATCAAGATTCCACCA +
Preference number: 5 (lower is better)
Translates to: VLNAISSWKVILKMSKKSSTSVV*FIKIPP
Trigger: TGGTGGAATCTTGATGAACAACACCACCGATGTAGA...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGAATCCGAAGTCTTCTTaGACCACTGATTGTCGTGTA +
Preference number: 5 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWNPKSS*TTDCRV
Trigger: TACACGACAATCAGTGGTCAAAGAAGACTTCGGATT...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAAAATCCGAAGTCTTCTTaGACCACTGATTGTCGTGTA +
Preference number: 5 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQNPKSS*TTDCRV
Trigger: TACACGACAATCAGTGGTCAAAGAAGACTTCGGATT...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATCACATTAAATATTCCTaGGATCAGTTCTGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHHIKYS*DQFWWA
Trigger: AGCCCACCAGAACTGATCCAAGGAATATTTAATGTG...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGTATCATTCTGAGTTGTaGAGAGTATGGGTTTCCCAC +
Preference number: 5 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWYHSEL*RVWVSH
Trigger: GTGGGAAACCCATACTCTCAACAACTCAGAATGATA...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS GCA 90 bp GATCTGTGTCTTAGGCATTTCTACCACTCCATGGTACCACCAAAATaGTTTGTTTGTGAATCAAGAGTCAGTTCTTTACATATGAAAGTT +
Preference number: 5 (lower is better)
Translates to: DLCLRHFYHSMVPPK*FVCESRVSSLHMKV
Trigger: AACTTTCATATGTAAAGAACTGACTCTTGATTCACAAACAAAGCATTTTGGTGGTACCATGGAGTGGTAGAAATGCCTAAGACACAGATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514418.1
CDS-3UTR CAA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATATGAGTCATAGACATTaGTTTGGGGCTGGAAAAGTA +
Preference number: 5 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHMSHRH*FGAGKV
Trigger: TACTTTTCCAGCCCCAAACAAATGTCTATGACTCAT...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAAATGAGTCATAGACATTaGTTTGGGGCTGGAAAAGTA +
Preference number: 5 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQMSHRH*FGAGKV
Trigger: TACTTTTCCAGCCCCAAACAAATGTCTATGACTCAT...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATGTCGTTCAAAAATTGTaGTCTATCCAAGTGCATCTG +
Preference number: 5 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHVVQKL*SIQVHL
Trigger: CAGATGCACTTGGATAGACAACAATTTTTGAACGAC...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGGTCGTTCAAAAATTGTaGTCTATCCAAGTGCATCTG +
Preference number: 5 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWVVQKL*SIQVHL
Trigger: CAGATGCACTTGGATAGACAACAATTTTTGAACGAC...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGGAGGTCGTTCAAAAATaGTTGTCTATCCAAGTGCAT +
Preference number: 5 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWEVVQK*LSIQVH
Trigger: ATGCACTTGGATAGACAACAATTTTTGAACGACCTC...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAAGAGGTCGTTCAAAAATaGTTGTCTATCCAAGTGCAT +
Preference number: 5 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQEVVQK*LSIQVH
Trigger: ATGCACTTGGATAGACAACAATTTTTGAACGACCTC...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAAGGTAACATTGTACTCTaGACATCTAACGTGTGTATG +
Preference number: 5 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQGNIVL*TSNVCM
Trigger: CATACACACGTTAGATGTCAAGAGTACAATGTTACC...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAACACATTAAATATTCCTaGGATCAGTTCTGGTGGGCT +
Preference number: 5 (lower is better)
Translates to: EVLNAISSWKVILKMSKKHIKYS*DQFWWA
Trigger: AGCCCACCAGAACTGATCCAAGGAATATTTAATGTG...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCATATCATTCTGAGTTGTaGAGAGTATGGGTTTCCCAC +
Preference number: 5 (lower is better)
Translates to: VLNAISSWKVILKMSKKSYHSEL*RVWVSH
Trigger: GTGGGAAACCCATACTCTCAACAACTCAGAATGATA...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp TTGTTCCCTTTATGGTACAATTGTACCTTAATTGGCTTTATACCTGAGCACCAACATTATCATTCTGAGTaGTTGAGAGTATGGGTTTCC +
Preference number: 5 (lower is better)
Translates to: LFPLWYNCTLIGFIPEHQHYHSE*LRVWVS
Trigger: GGAAACCCATACTCTCAACAACTCAGAATGATAATG...TTGGTGCTCAGGTATAAAGCCAATTAAGGTACAATTGTACCATAAAGGGAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGGAAAACCATTTCTGGTaGTTCTCGCTGCTTTACAAT +
Preference number: 5 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWENHFW*FSLLYN
Trigger: ATTGTAAAGCAGCGAGAACAACCAGAAATGGTTTTC...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATTTTTTCTCATTGCAATaGGGAGAGGAACTGAGACAA +
Preference number: 5 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHFFSLQ*GEELRQ
Trigger: TTGTCTCAGTTCCTCTCCCAATTGCAATGAGAAAAA...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS CCA 90 bp CTTTTGTTGGATAATACCCATTATCATTCTGAGTTGTTGAGAGTATaGGTTTCCCACTTCAGGCAGCAATGTCTTAGATTTAAGAAAATC +
Preference number: 5 (lower is better)
Translates to: LLLDNTHYHSELLRV*VSHFRQQCLRFKKI
Trigger: GATTTTCTTAAATCTAAGACATTGCTGCCTGAAGTGGGAAACCCATACTCTCAACAACTCAGAATGATAATGGGTATTATCCAACAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000502830.1
CDS CCA 90 bp AAACACTTGAAGTTCTGGGAACACTTACTCTGCAATAATCCAAAGTaGCAACATATTCATAAGATCCTAGAGATAACTCTGGTTTCTCAT +
Preference number: 5 (lower is better)
Translates to: KHLKFWEHLLCNNPK*QHIHKILEITLVSH
Trigger: ATGAGAAACCAGAGTTATCTCTAGGATCTTATGAATATGTTGCCACTTTGGATTATTGCAGAGTAAGTGTTCCCAGAACTTCAAGTGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514418.1
CDS-3UTR CAA 90 bp AAAGTCTGCTATGCAGACCTTAAGTTGAAAAATGTGTTCAATGGAGTTACATGGTCTTCACATATGAGCTaGACAAGTCCATTCTTTATG +
Preference number: 5 (lower is better)
Translates to: KVCYADLKLKNVFNGVTWSSHMS*TSPFFM
Trigger: CATAAAGAATGGACTTGTCAAGCTCATATGTGAAGA...CCATGTAACTCCATTGAACACATTTTTCAACTTAAGGTCTGCATAGCAGACTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp TCATCTAGAAAATTAGGCACCAAGAAGGAGATTATCTCCTTGGAAATGCAACATAATGTCATATCTGTGTaGATATGTGCAAAAGATGGC +
Preference number: 5 (lower is better)
Translates to: SSRKLGTKKEIISLEMQHNVISV*ICAKDG
Trigger: GCCATCTTTTGCACATATCAACACAGATATGACATT...ATGTTGCATTTCCAAGGAGATAATCTCCTTCTTGGTGCCTAATTTTCTAGATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCACATTATCATTCTGAGTaGTTGAGAGTATGGGTTTCC +
Preference number: 5 (lower is better)
Translates to: VLNAISSWKVILKMSKKSHYHSE*LRVWVS
Trigger: GGAAACCCATACTCTCAACAACTCAGAATGATAATG...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAAGAAAACCATTTCTGGTaGTTCTCGCTGCTTTACAAT +
Preference number: 5 (lower is better)
Translates to: EVLNAISSWKVILKMSKKENHFW*FSLLYN
Trigger: ATTGTAAAGCAGCGAGAACAACCAGAAATGGTTTTC...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCATTTTTCTCATTGCAATaGGGAGAGGAACTGAGACAA +
Preference number: 5 (lower is better)
Translates to: VLNAISSWKVILKMSKKSFFSLQ*GEELRQ
Trigger: TTGTCTCAGTTCCTCTCCCAATTGCAATGAGAAAAA...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS CCA 90 bp AATGAAAATAATACTTACCATATCTGTGTTGATATGTGCAAAAGATaGCACATTAAATATTCCTTGGATCAGTTCTGGTGGGCTGCTTAC +
Preference number: 5 (lower is better)
Translates to: NENNTYHICVDMCKR*HIKYSLDQFWWAAY
Trigger: GTAAGCAGCCCACCAGAACTGATCCAAGGAATATTTAATGTGCCATCTTTTGCACATATCAACACAGATATGGTAAGTATTATTTTCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS-3UTR CAA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCAAGCCACGTAACCTTGTaGACTCATTATGAAAATATC +
Preference number: 5 (lower is better)
Translates to: VLNAISSWKVILKMSKKSSHVTL*THYENI
Trigger: GATATTTTCATAATGAGTCAACAAGGTTACGTGGCT...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CAA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCATGTAGCCACGTAACCTaGTTGACTCATTATGAAAAT +
Preference number: 5 (lower is better)
Translates to: VLNAISSWKVILKMSKKSCSHVT*LTHYEN
Trigger: ATTTTCATAATGAGTCAACAAGGTTACGTGGCTACA...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000280551.11
CDS-3UTR CAA 90 bp GTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAATCATCTTCACATATGAGCTaGACAAGTCCATTCTTTATG +
Preference number: 5 (lower is better)
Translates to: VLNAISSWKVILKMSKKSSSHMS*TSPFFM
Trigger: CATAAAGAATGGACTTGTCAAGCTCATATGTGAAGA...TGATTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAAAATGTCATATCTGTGTaGATATGTGCAAAAGATGGC +
Preference number: 5 (lower is better)
Translates to: EVLNAISSWKVILKMSKKNVISV*ICAKDG
Trigger: GCCATCTTTTGCACATATCAACACAGATATGACATT...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000511481.5
CDS-3UTR CAA 90 bp GAAGTTCTAAATGCCATCTCTTCCTGGAAAGTTATTCTGAAAATGAGCAAGAAAAAGCCAGAAGACAGATaGGATTTTCTTGTTTATGGT +
Preference number: 5 (lower is better)
Translates to: EVLNAISSWKVILKMSKKKPEDR*DFLVYG
Trigger: ACCATAAACAAGAAAATCCAATCTGTCTTCTGGCTT...TTTCTTGCTCATTTTCAGAATAACTTTCCAGGAAGAGATGGCATTTAGAACTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000511481.5
CDS GCA 72 bp CCTAGTGCCGGCAGCCCTCGGTGGCCGGGCTCCCGCTaGGGTCGCTTCTCCCGCCGCGCCTCTTCCCCGGCC +
Preference number: 6 (lower is better)
Translates to: PSAGSPRWPGSR*GRFSRRASSPA
Trigger: GGCCGGGGAAGAGGCGCGGCGGGAGAAGCGACCGCAGCGGGAGCCCGGCCACCGAGGGCTGCCGGCACTAGG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000419654.6
CDS CCA 72 bp GCTGGCGGCTCTGCGCCTAGTGCCGGCAGCCCTCGGTaGCCGGGCTCCCGCTGCGGTCGCTTCTCCCGCCGC +
Preference number: 6 (lower is better)
Translates to: AGGSAPSAGSPR*PGSRCGRFSRR
Trigger: GCGGCGGGAGAAGCGACCGCAGCGGGAGCCCGGCCACCGAGGGCTGCCGGCACTAGGCGCAGAGCCGCCAGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000280551.11
ENST00000419654.6
CDS CAA 90 bp CTCTTCCCCGGCCGGCGTCCCCTTAGCCTGGACTCACGCTCGGAGTaGCAGCTGGGCTGGGAACTGCCACGTCAAACCCTTTCTCGGCTG +
Preference number: 6 (lower is better)
Translates to: LFPGRRPLSLDSRSE*QLGWELPRQTLSRL
Trigger: CAGCCGAGAAAGGGTTTGACGTGGCAGTTCCCAGCCCAGCTGCAACTCCGAGCGTGAGTCCAGGCTAAGGGGACGCCGGCCGGGGAAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419654.6
CDS GCA 72 bp TGGACTCACGCTCGGAGTTGCAGCTGGGCTGGGAACTaGCACGTCAAACCCTTTCTCGGCTGCGCGCCCCCA +
Preference number: 6 (lower is better)
Translates to: WTHARSCSWAGN*HVKPFLGCAPP
Trigger: TGGGGGCGCGCAGCCGAGAAAGGGTTTGACGTGGCAGTTCCCAGCCCAGCTGCAACTCCGAGCGTGAGTCCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000419654.6
CDS CCA 72 bp CTTAGCCTGGACTCACGCTCGGAGTTGCAGCTGGGCTaGGAACTGCCACGTCAAACCCTTTCTCGGCTGCGC +
Preference number: 6 (lower is better)
Translates to: LSLDSRSELQLG*ELPRQTLSRLR
Trigger: GCGCAGCCGAGAAAGGGTTTGACGTGGCAGTTCCCAGCCCAGCTGCAACTCCGAGCGTGAGTCCAGGCTAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419654.6
CDS CCA 72 bp TGCAATGATGTGGCTGACAGAGGGCCAGGGGGTCCCTaGCTTGGAGGAGCCATGCCTGAACCTTTGGGGAGG +
Preference number: 6 (lower is better)
Translates to: CNDVADRGPGGP*LGGAMPEPLGR
Trigger: CCTCCCCAAAGGTTCAGGCATGGCTCCTCCAAGCCAGGGACCCCCTGGCCCTCTGTCAGCCACATCATTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000509818.5
CDS GCA 72 bp CAACATTCCCCTAGTGGCGGTGGCCCCCAAAGGCCCTaGTGGCTTCATCATACCTGTTGGAGATGCTGTGTG +
Preference number: 6 (lower is better)
Translates to: QHSPSGGGPQRP*WLHHTCWRCCV
Trigger: CACACAGCATCTCCAACAGGTATGATGAAGCCAGCAGGGCCTTTGGGGGCCACCGCCACTAGGGGAATGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000280551.11
ENST00000419654.6
ENST00000503683.1
ENST00000506622.5
ENST00000509818.5
CDS CCA 72 bp GTGATTGAGTCCCTGGCCCTCACCAGCCGTGAGGCTTaGTCCGGAGTCTCAGTCTTCCTTGATCTGACCCAT +
Preference number: 6 (lower is better)
Translates to: VIESLALTSREA*SGVSVFLDLTH
Trigger: ATGGGTCAGATCAAGGAAGACTGAGACTCCGGACCAAGCCTCACGGCTGGTGAGGGCCAGGGACTCAATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000505280.1
ENST00000506622.5
ENST00000509818.5
ENST00000514561.5
CDS CCA 72 bp TGCAATGATGTGGCTGACAGAGGGCCAGGGGGTCCCTaGCTTGGAGGAGCCATGCCTGAACAGGATATACAG +
Preference number: 6 (lower is better)
Translates to: CNDVADRGPGGP*LGGAMPEQDIQ
Trigger: CTGTATATCCTGTTCAGGCATGGCTCCTCCAAGCCAGGGACCCCCTGGCCCTCTGTCAGCCACATCATTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000506622.5
CDS GCA 72 bp TCCAGGCTAGAGTATGGTGGCACAATCATAGCTCGCTaGATCCTCAAGCTCCTGGGTTCCAGGGATCCTCTT +
Preference number: 6 (lower is better)
Translates to: SRLEYGGTIIAR*ILKLLGSRDPL
Trigger: AAGAGGATCCCTGGAACCCAGGAGCTTGAGGATGCAGCGAGCTATGATTGTGCCACCATACTCTAGCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505134.5
CDS CCA 72 bp GAGTCAGCCACACCCATGGTCATGACCAGCTGTCTCTaGTATGCTCGTTCATCAGTTGAGATCTCTGGTCTG +
Preference number: 6 (lower is better)
Translates to: ESATPMVMTSCL*YARSSVEISGL
Trigger: CAGACCAGAGATCTCAACTGATGAACGAGCATACCAGAGACAGCTGGTCATGACCATGGGTGTGGCTGACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280551.11
ENST00000505134.5
ENST00000511481.5
ENST00000511715.1
CDS CCA 72 bp CAAAGGGAATGCAGCGTCTTAGATAGCCCAGAAATCTaGTTAGTGGTCTACAGGCCAATCCAGCTGCACGTG +
Preference number: 6 (lower is better)
Translates to: QRECSVLDSPEI*LVVYRPIQLHV
Trigger: CACGTGCAGCTGGATTGGCCTGTAGACCACTAACCAGATTTCTGGGCTATCTAAGACGCTGCATTCCCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS CAA 72 bp GCAATAGGTAGCTCACCTGGCTTGCTGCAGAAGGACTaGCACAATTCTTCCGGTAACATGCCAACATATGGG +
Preference number: 6 (lower is better)
Translates to: AIGSSPGLLQKD*HNSSGNMPTYG
Trigger: CCCATATGTTGGCATGTTACCGGAAGAATTGTGCAAGTCCTTCTGCAGCAAGCCAGGTGAGCTACCTATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502526.1
CDS TCA 72 bp CAGAGCAACGAACGGCAGCAGGTAACATTGTACTCTTaGCATCTAACGTGTGTATGGGCAGAAGTTGTGGGT +
Preference number: 6 (lower is better)
Translates to: QSNERQQVTLYS*HLTCVWAEVVG
Trigger: ACCCACAACTTCTGCCCATACACACGTTAGATGTCAAGAGTACAATGTTACCTGCTGCCGTTCGTTGCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280551.11
ENST00000505134.5
ENST00000511481.5
ENST00000511715.1
CDS CAA 72 bp TCAGAGCAACGAACGGCAGCAGGTAACATTGTACTCTaGACATCTAACGTGTGTATGGGCAGAAGTTGTGGG +
Preference number: 6 (lower is better)
Translates to: SEQRTAAGNIVL*TSNVCMGRSCG
Trigger: CCCACAACTTCTGCCCATACACACGTTAGATGTCAAGAGTACAATGTTACCTGCTGCCGTTCGTTGCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000280551.11
ENST00000505134.5
ENST00000511481.5
ENST00000511715.1
CDS CAA 90 bp CATCTATGTGCAATAGGTAGCTCACCTGGCTTGCTGCAGAAGGACTaGCACAATTCTTCCGGTAACATGCCAACATATGGGCAGTCTGAT +
Preference number: 6 (lower is better)
Translates to: HLCAIGSSPGLLQKD*HNSSGNMPTYGQSD
Trigger: ATCAGACTGCCCATATGTTGGCATGTTACCGGAAGAATTGTGCAAGTCCTTCTGCAGCAAGCCAGGTGAGCTACCTATTGCACATAGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502526.1
CDS TCA 72 bp AGTTCAGCACCAGGGATGAGTCCAGAGCATAAGAACTaGATTCAGTTCCCATCTCTGCCACTTTACTACCTG +
Preference number: 6 (lower is better)
Translates to: SSAPGMSPEHKN*IQFPSLPLYYL
Trigger: CAGGTAGTAAAGTGGCAGAGATGGGAACTGAATTCAGTTCTTATGCTCTGGACTCATCCCTGGTGCTGAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS GCA 72 bp CAGTATGCTGATATAAGCACAGACCTACCAATCTGCTaGCTTGTGGTAGAGACACTGGCTATTTCCTGTGGA +
Preference number: 6 (lower is better)
Translates to: QYADISTDLPIC*LVVETLAISCG
Trigger: TCCACAGGAAATAGCCAGTGTCTCTACCACAAGGCAGCAGATTGGTAGGTCTGTGCTTATATCAGCATACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS CCA 72 bp AATCACATACAAGTCAAAATAACACACTGTACCTGTTaGAGATGCTGTGTGCGACGGATCCCCATAGTGCCC +
Preference number: 6 (lower is better)
Translates to: NHIQVKITHCTC*RCCVRRIPIVP
Trigger: GGGCACTATGGGGATCCGTCGCACACAGCATCTCCAACAGGTACAGTGTGTTATTTTGACTTGTATGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000505280.1
CDS TCA 72 bp CTCAGCAAGAAGATGCCAACAGCCAATGCATCACTGTaGGTTGGCCAGAGAACATGTGAGTTAGAATGTTTC +
Preference number: 6 (lower is better)
Translates to: LSKKMPTANASL*VGQRTCELECF
Trigger: GAAACATTCTAACTCACATGTTCTCTGGCCAACTCACAGTGATGCATTGGCTGTTGGCATCTTCTTGCTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS TCA 72 bp CAGGCCAATCCAGCTGCACGTGGCATCCAGGTGATATaGAGGATTTTGACTTACATTTCTTCCGTTAAGACA +
Preference number: 6 (lower is better)
Translates to: QANPAARGIQVI*RILTYISSVKT
Trigger: TGTCTTAACGGAAGAAATGTAAGTCAAAATCCTTCATATCACCTGGATGCCACGTGCAGCTGGATTGGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS GCA 72 bp TACCAGTATGCTGATATAAGCACAGACCTACCAATCTaGTGCCTTGTGGTAGAGACACTGGCTATTTCCTGT +
Preference number: 6 (lower is better)
Translates to: YQYADISTDLPI*CLVVETLAISC
Trigger: ACAGGAAATAGCCAGTGTCTCTACCACAAGGCAGCAGATTGGTAGGTCTGTGCTTATATCAGCATACTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS GCA 72 bp CAAAATAAGGGAGGCAGAGGCACTGTACGGAACTACTaGATTAAGAACCAGGTATATTCTGTCTGGCAAGGA +
Preference number: 6 (lower is better)
Translates to: QNKGGRGTVRNY*IKNQVYSVWQG
Trigger: TCCTTGCCAGACAGAATATACCTGGTTCTTAATGCAGTAGTTCCGTACAGTGCCTCTGCCTCCCTTATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514418.1
CDS CCA 72 bp GGTAACCCATGTAAAACACCTAGAGCACACAGTAACTaGCACAGAGTAGGCATTCAAAGAGCAGCAGTTGTT +
Preference number: 6 (lower is better)
Translates to: GNPCKTPRAHSN*HRVGIQRAAVV
Trigger: AACAACTGCTGCTCTTTGAATGCCTACTCTGTGCCAGTTACTGTGTGCTCTAGGTGTTTTACATGGGTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS CCA 72 bp CTGCTGCCTTGTGGTAGAGACACTGGCTATTTCCTGTaGATGTTCAGTTCAGCAACTATGCATTCAGCATTT +
Preference number: 6 (lower is better)
Translates to: LLPCGRDTGYFL*MFSSATMHSAF
Trigger: AAATGCTGAATGCATAGTTGCTGAACTGAACATCCACAGGAAATAGCCAGTGTCTCTACCACAAGGCAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS TCA 72 bp GGAGCCATGCCTGAACAGGATATACAGCATTTCTGTTaGTGTAAATCTCAGTACTGTGACTCTTTCCTCTCC +
Preference number: 6 (lower is better)
Translates to: GAMPEQDIQHFC*CKSQYCDSFLS
Trigger: GGAGAGGAAAGAGTCACAGTACTGAGATTTACATCAACAGAAATGCTGTATATCCTGTTCAGGCATGGCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506622.5
CDS TCA 72 bp CTACATTCTTCTGAGTATGCAGTTCAGCACCAGGGATaGGTCCAGAGCATAAGAACTGAATTCAGTTCCCAT +
Preference number: 6 (lower is better)
Translates to: LHSSEYAVQHQG*VQSIRTEFSSH
Trigger: ATGGGAACTGAATTCAGTTCTTATGCTCTGGACTCATCCCTGGTGCTGAACTGCATACTCAGAAGAATGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS CCA 72 bp TTGATATGTGCAAAAGATGGCACATTAAATATTCCTTaGATCAGTTCTGGTGGGCTGCTTACTCCCAACCAC +
Preference number: 6 (lower is better)
Translates to: LICAKDGTLNIP*ISSGGLLTPNH
Trigger: GTGGTTGGGAGTAAGCAGCCCACCAGAACTGATCCAAGGAATATTTAATGTGCCATCTTTTGCACATATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280551.11
ENST00000505134.5
ENST00000511481.5
ENST00000511715.1
CDS CCA 72 bp GCAGTTGTTTTTATTTTATCTAGTGCTACAGCAGTCTaGTGTAGCTGTTATCAGCACTACCCACTCACTGCT +
Preference number: 6 (lower is better)
Translates to: AVVFILSSATAV*CSCYQHYPLTA
Trigger: AGCAGTGAGTGGGTAGTGCTGATAACAGCTACACCAGACTGCTGTAGCACTAGATAAAATAAAAACAACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS CCA 72 bp GATGGGATCTGTGTCTTAGGCATTTCTACCACTCCATaGTACCACCAAAATGCTTTGTTTGTGAATCAAGAG +
Preference number: 6 (lower is better)
Translates to: DGICVLGISTTP*YHQNALFVNQE
Trigger: CTCTTGATTCACAAACAAAGCATTTTGGTGGTACCATGGAGTGGTAGAAATGCCTAAGACACAGATCCCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514418.1
CDS CAA 72 bp GTTGATATGTGCAAAAGATGGCACATTAAATATTCCTaGGATCAGTTCTGGTGGGCTGCTTACTCCCAACCA +
Preference number: 6 (lower is better)
Translates to: VDMCKRWHIKYS*DQFWWAAYSQP
Trigger: TGGTTGGGAGTAAGCAGCCCACCAGAACTGATCCAAGGAATATTTAATGTGCCATCTTTTGCACATATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280551.11
ENST00000505134.5
ENST00000511481.5
ENST00000511715.1
CDS CAA 90 bp CATATCTGTGTTGATATGTGCAAAAGATGGCACATTAAATATTCCTaGGATCAGTTCTGGTGGGCTGCTTACTCCCAACCACAGGAACAT +
Preference number: 6 (lower is better)
Translates to: HICVDMCKRWHIKYS*DQFWWAAYSQPQEH
Trigger: ATGTTCCTGTGGTTGGGAGTAAGCAGCCCACCAGAACTGATCCAAGGAATATTTAATGTGCCATCTTTTGCACATATCAACACAGATATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280551.11
ENST00000505134.5
ENST00000511481.5
ENST00000511715.1
CDS TCA 72 bp GGTATGCTCGTTCATCAGTTGAGATCTCTGGTCTGCTaGGTAGTACACAGTTTTTCAACAAGCAATTCATGT +
Preference number: 6 (lower is better)
Translates to: GMLVHQLRSLVC*VVHSFSTSNSC
Trigger: ACATGAATTGCTTGTTGAAAAACTGTGTACTACTCAGCAGACCAGAGATCTCAACTGATGAACGAGCATACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000280551.11
ENST00000505134.5
ENST00000511481.5
ENST00000511715.1
CDS GCA 72 bp TTCTCAGCTACACTGTTTACTGTAACAGCATCTAAGTaGCTGCAACATCATAAGCCTTCTATAGCTATGTGC +
Preference number: 6 (lower is better)
Translates to: FSATLFTVTASK*LQHHKPSIAMC
Trigger: GCACATAGCTATAGAAGGCTTATGATGTTGCAGGCACTTAGATGCTGTTACAGTAAACAGTGTAGCTGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502526.1
CDS CCA 72 bp GCGAGAGAAAAGAATGTACTTTGTTCCTTCAGTGGATaGAAAATTCCATCCAAGTACTACTGTTCCGGCATT +
Preference number: 6 (lower is better)
Translates to: AREKNVLCSFSG*KIPSKYYCSGI
Trigger: AATGCCGGAACAGTAGTACTTGGATGGAATTTTCCATCCACTGAAGGAACAAAGTACATTCTTTTCTCTCGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS CAA 72 bp CCTCTTTTGTTGGATAATACCCATTATCATTCTGAGTaGTTGAGAGTATGGGTTTCCCACTTCAGGCAGCAA +
Preference number: 6 (lower is better)
Translates to: PLLLDNTHYHSE*LRVWVSHFRQQ
Trigger: TTGCTGCCTGAAGTGGGAAACCCATACTCTCAACAACTCAGAATGATAATGGGTATTATCCAACAAAAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280551.11
ENST00000502830.1
ENST00000505134.5
ENST00000511481.5
CDS CAA 90 bp CCATCCAAGTACTACTGTTCCGGCATTAAAACAAACTACCAAATGTaGATTTCTCAAAGGGAATGCAGCGTCTTAGATAGCCCAGAAATC +
Preference number: 6 (lower is better)
Translates to: PSKYYCSGIKTNYQM*ISQRECSVLDSPEI
Trigger: GATTTCTGGGCTATCTAAGACGCTGCATTCCCTTTGAGAAATCAACATTTGGTAGTTTGTTTTAATGCCGGAACAGTAGTACTTGGATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS CAA 90 bp ATATGGCCTCTTTTGTTGGATAATACCCATTATCATTCTGAGTTGTaGAGAGTATGGGTTTCCCACTTCAGGCAGCAATGTCATATCTGT +
Preference number: 6 (lower is better)
Translates to: IWPLLLDNTHYHSEL*RVWVSHFRQQCHIC
Trigger: ACAGATATGACATTGCTGCCTGAAGTGGGAAACCCATACTCTCAACAACTCAGAATGATAATGGGTATTATCCAACAAAAGAGGCCATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280551.11
ENST00000505134.5
ENST00000511481.5
CDS TCA 72 bp TTTTGTTGGATAATACCCATTATCATTCTGAGTTGTTaGGAGTATGGGTTTCCCACTTCAGGCAGCAATGTC +
Preference number: 6 (lower is better)
Translates to: FCWIIPIIILSC*EYGFPTSGSNV
Trigger: GACATTGCTGCCTGAAGTGGGAAACCCATACTCTCAACAACTCAGAATGATAATGGGTATTATCCAACAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000280551.11
ENST00000502830.1
ENST00000505134.5
ENST00000511481.5
CDS TCA 72 bp AATCCACTATCAGAGTCAAACAATAGCCATCGGCAGTaGTGCTCACACAACAATGGTCTACAAATAACGTTT +
Preference number: 6 (lower is better)
Translates to: NPLSESNNSHRQ*CSHNNGLQITF
Trigger: AAACGTTATTTGTAGACCATTGTTGTGTGAGCATCACTGCCGATGGCTATTGTTTGACTCTGATAGTGGATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS CCA 72 bp GATAATACCCATTATCATTCTGAGTTGTTGAGAGTATaGGTTTCCCACTTCAGGCAGCAATGTCATATCTGT +
Preference number: 6 (lower is better)
Translates to: DNTHYHSELLRV*VSHFRQQCHIC
Trigger: ACAGATATGACATTGCTGCCTGAAGTGGGAAACCCATACTCTCAACAACTCAGAATGATAATGGGTATTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000280551.11
ENST00000505134.5
ENST00000511481.5
CDS CAA 90 bp ATATGGCCTCTTTTGTTGGATAATACCCATTATCATTCTGAGTTGTaGAGAGTATGGGTTTCCCACTTCAGGCAGCAATGTCTTAGATTT +
Preference number: 6 (lower is better)
Translates to: IWPLLLDNTHYHSEL*RVWVSHFRQQCLRF
Trigger: AAATCTAAGACATTGCTGCCTGAAGTGGGAAACCCATACTCTCAACAACTCAGAATGATAATGGGTATTATCCAACAAAAGAGGCCATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000502830.1
CDS TCA 72 bp ATTTTGTTGATGAAAGTCAAGGAAATACCAGTATGCTaGTATAAGCACAGACCTACCAATCTGCTGCCTTGT +
Preference number: 6 (lower is better)
Translates to: ILLMKVKEIPVC*YKHRPTNLLPC
Trigger: ACAAGGCAGCAGATTGGTAGGTCTGTGCTTATATCAGCATACTGGTATTTCCTTGACTTTCATCAACAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS CCA 72 bp CAGCAATGTCATATCTGTGTTGATATGTGCAAAAGATaGCACATTAAATATTCCTTGGATCAGTTCTGGTGG +
Preference number: 6 (lower is better)
Translates to: QQCHICVDMCKR*HIKYSLDQFWW
Trigger: CCACCAGAACTGATCCAAGGAATATTTAATGTGCCATCTTTTGCACATATCAACACAGATATGACATTGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000280551.11
ENST00000505134.5
ENST00000511481.5
CDS CCA 72 bp GATAATACCCATTATCATTCTGAGTTGTTGAGAGTATaGGTTTCCCACTTCAGGCAGCAATGTCTTAGATTT +
Preference number: 6 (lower is better)
Translates to: DNTHYHSELLRV*VSHFRQQCLRF
Trigger: AAATCTAAGACATTGCTGCCTGAAGTGGGAAACCCATACTCTCAACAACTCAGAATGATAATGGGTATTATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502830.1
CDS CCA 72 bp AAGTTCTGGGAACACTTACTCTGCAATAATCCAAAGTaGCAACATATTCATAAGATCCTAGAGATAACTCTG +
Preference number: 6 (lower is better)
Translates to: KFWEHLLCNNPK*QHIHKILEITL
Trigger: CAGAGTTATCTCTAGGATCTTATGAATATGTTGCCACTTTGGATTATTGCAGAGTAAGTGTTCCCAGAACTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514418.1
CDS CCA 72 bp AATACTTACCATATCTGTGTTGATATGTGCAAAAGATaGCACATTAAATATTCCTTGGATCAGTTCTGGTGG +
Preference number: 6 (lower is better)
Translates to: NTYHICVDMCKR*HIKYSLDQFWW
Trigger: CCACCAGAACTGATCCAAGGAATATTTAATGTGCCATCTTTTGCACATATCAACACAGATATGGTAAGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511715.1
CDS CAA 72 bp AGTATATGTTTTATGCAAACAACTTCCTGTGAAAGTTaGATCCCTTTTCAAGATTCAAGGCTATGTTGCGAG +
Preference number: 6 (lower is better)
Translates to: SICFMQTTSCES*IPFQDSRLCCE
Trigger: CTCGCAACATAGCCTTGAATCTTGAAAAGGGATCAAACTTTCACAGGAAGTTGTTTGCATAAAACATATACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000511715.1