RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEC24C (Homo sapiens)

Ensembl gene IDs: ENSG00000176986

Ensembl transcript IDs: ENST00000339365.2, ENST00000345254.9, ENST00000465076.5, ENST00000477008.1, ENST00000496827.1, ENST00000635550.1

Found 899 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGCAGTGGCTGAGGAGGCCCAGGCTGACTGCCAAAGGTGGGTGCTaGTGGGTAGGGGCCTCCATAATTAGACTGAGGGCCCCGGGCTGG +
Preference number: 1 (lower is better)
Translates to: RQWLRRPRLTAKGGC*WVGASIIRLRAPGW
Trigger: CCAGCCCGGGGCCCTCAGTCTAATTATGGAGGCCCCTACCCAGCAGCACCCACCTTTGGCAGTCAGCCTGGGCCTCCTCAGCCACTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR CCA 90 bp CAGTGGCTGAGGAGGCCCAGGCTGACTGCCAAAGGTGGGTGCTGCTaGGTAGGGGCCTCCATAATTAGACTGAGGGCCCCGGGCTGGTCC +
Preference number: 1 (lower is better)
Translates to: QWLRRPRLTAKGGCC*VGASIIRLRAPGWS
Trigger: GGACCAGCCCGGGGCCCTCAGTCTAATTATGGAGGCCCCTACCCAGCAGCACCCACCTTTGGCAGTCAGCCTGGGCCTCCTCAGCCACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR TCA 90 bp AGTGGTCCCAGGGGCCCAGTCATCTGGGTGCCAGGGGGCAGAGCTTaGGGAGGTGAAGACACATGGTTGGGCTGGCTCACTGAGGGCCCT +
Preference number: 1 (lower is better)
Translates to: SGPRGPVIWVPGGRA*GGEDTWLGWLTEGP
Trigger: AGGGCCCTCAGTGAGCCAGCCCAACCATGTGTCTTCACCTCCTCAAGCTCTGCCCCCTGGCACCCAGATGACTGGGCCCCTGGGACCACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR GCA 90 bp CCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCTCTaGCTCTCTCCCCAACAACCCCGGGCCTGGAGAAGCAGTGTTTCT +
Preference number: 1 (lower is better)
Translates to: PKRCPSRRERRSSCL*LSPQQPRAWRSSVS
Trigger: AGAAACACTGCTTCTCCAGGCCCGGGGTTGTTGGGGAGAGAGGCAGAGGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR CCA 90 bp CGGCGCTCCAGCTGCCTCTGCCTCTCTCCCCAACAACCCCGGGCCTaGAGAAGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAAC +
Preference number: 1 (lower is better)
Translates to: RRSSCLCLSPQQPRA*RSSVSRGSSEWDVN
Trigger: GTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCTTCTCCAGGCCCGGGGTTGTTGGGGAGAGAGGCAGAGGCAGCTGGAGCGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR CCA 90 bp TCTGGGTGCCAGGGGGCAGAGCTTGAGGAGGTGAAGACACATGGTTaGGCTGGCTCACTGAGGGCCCTCCAAAACTCTGTCCAGGCAGGA +
Preference number: 1 (lower is better)
Translates to: SGCQGAELEEVKTHG*AGSLRALQNSVQAG
Trigger: TCCTGCCTGGACAGAGTTTTGGAGGGCCCTCAGTGAGCCAGCCCAACCATGTGTCTTCACCTCCTCAAGCTCTGCCCCCTGGCACCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR GCA 90 bp ATAGATCAGCCAGCTGGGTGCAGCAGTTCAGGGCCAGATTATGGATaGGGAGCCGACGCTGCCCTGCACAGCTGGTGTAAAGCAGGGCAC +
Preference number: 1 (lower is better)
Translates to: IDQPAGCSSSGPDYG*GADAALHSWCKAGH
Trigger: GTGCCCTGCTTTACACCAGCTGTGCAGGGCAGCGTCGGCTCCGCATCCATAATCTGGCCCTGAACTGCTGCACCCAGCTGGCTGATCTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR CCA 90 bp ATGTATGCTTTGCAGCGGTTGCAGCGCAAAGGGCCAGATTCCCCATaGTCCACAACATACGGTGAAGCCTCCTCTGGGGGCAGCCTTGCC +
Preference number: 1 (lower is better)
Translates to: MYALQRLQRKGPDSP*STTYGEASSGGSLA
Trigger: GGCAAGGCTGCCCCCAGAGGAGGCTTCACCGTATGTTGTGGACCATGGGGAATCTGGCCCTTTGCGCTGCAACCGCTGCAAAGCATACAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR CCA 90 bp GTGCTTGTCCGGACCCGCATCACAGCATCAAAGCCAACAACCTTCTaGACATCACGACGCAGGTCACTCAGGAACCGCTCCTGGTCGTTC +
Preference number: 1 (lower is better)
Translates to: VLVRTRITASKPTTF*TSRRRSLRNRSWSF
Trigger: GAACGACCAGGAGCGGTTCCTGAGTGACCTGCGTCGTGATGTCCAGAAGGTTGTTGGCTTTGATGCTGTGATGCGGGTCCGGACAAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR TCA 90 bp GGGCCTGGAGAAGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTaGACTGGCTCTGTGAGGTATTGCAAGTTGATGACCAGGCTCCCT +
Preference number: 1 (lower is better)
Translates to: GPGEAVFLVGAQSGM*TGSVRYCKLMTRLP
Trigger: AGGGAGCCTGGTCATCAACTTGCAATACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCTTCTCCAGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR CCA 90 bp CAACCCCGGGCCTGGAGAAGCAGTGTTTCTCGTGGGAGCTCAGAGTaGGATGTGAACTGGCTCTGTGAGGTATTGCAAGTTGATGACCAG +
Preference number: 1 (lower is better)
Translates to: QPRAWRSSVSRGSSE*DVNWLCEVLQVDDQ
Trigger: CTGGTCATCAACTTGCAATACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCTTCTCCAGGCCCGGGGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR CCA 90 bp CCTTGGTCTTTCACCAGGAAGTTGGTAGTGACTAAGGGTGGCACCTaGCCCCGTACTCCAGTAACAAATGGCTCTGTACCCCGGTTGTTC +
Preference number: 1 (lower is better)
Translates to: PWSFTRKLVVTKGGT*PRTPVTNGSVPRLF
Trigger: GAACAACCGGGGTACAGAGCCATTTGTTACTGGAGTACGGGGCCAGGTGCCACCCTTAGTCACTACCAACTTCCTGGTGAAAGACCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR CCA 90 bp CTGTTCTTCAGTTTCCCTGGGGCCTCTGCAATGGGCAGGGATGTATaGAATAGAAAGAGCTTCCCTGCACACTCAGCAGCCTTCAGAGCC +
Preference number: 1 (lower is better)
Translates to: LFFSFPGASAMGRDV*NRKSFPAHSAAFRA
Trigger: GGCTCTGAAGGCTGCTGAGTGTGCAGGGAAGCTCTTTCTATTCCATACATCCCTGCCCATTGCAGAGGCCCCAGGGAAACTGAAGAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR CCA 90 bp GGAAGAGAAAGAGATCTACACAGCAGCCTTGGGCCACACACTCTTTaGCCAGGGTCTGATAGGCACCTGTCTGAGGCTGGAACAGAGTCT +
Preference number: 1 (lower is better)
Translates to: GRERDLHSSLGPHTL*PGSDRHLSEAGTES
Trigger: AGACTCTGTTCCAGCCTCAGACAGGTGCCTATCAGACCCTGGCCAAAGAGTGTGTGGCCCAAGGCTGCTGTGTAGATCTCTTTCTCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR GCA 90 bp TCTCTGACATCCTGGGGTGCTTTCTGGAAGCTAGCCTGGGCCCTATaGCATTTACCCACTTGCTTTAGCTCAGTAGCTGCCGAATCTCCT +
Preference number: 1 (lower is better)
Translates to: SLTSWGAFWKLAWAL*HLPTCFSSVAAESP
Trigger: AGGAGATTCGGCAGCTACTGAGCTAAAGCAAGTGGGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
3UTR TCA 90 bp CCACGGAGTGATCATCAATCATTGCAGGAGAGAGCGAGCGAGCAGTaGAAGCAGAGAAACTTGACTGCTAACCTCCAGGCCCAAGAAGGA +
Preference number: 1 (lower is better)
Translates to: PRSDHQSLQERASEQ*KQRNLTANLQAQEG
Trigger: TCCTTCTTGGGCCTGGAGGTTAGCAGTCAAGTTTCTCTGCTTTCACTGCTCGCTCGCTCTCTCCTGCAATGATTGATGATCACTCCGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR TCA 90 bp CGTTCTCCACCTGAAAGGAAGCATATTTGTAGACAGAGCCACCAGTaGGCTGGGGCACAACAGAGAGTGTGGCCACATCCACATACTGGT +
Preference number: 1 (lower is better)
Translates to: RSPPERKHICRQSHQ*AGAQQRVWPHPHTG
Trigger: ACCAGTATGTGGATGTGGCCACACTCTCTGTTGTGCCCCAGCTCACTGGTGGCTCTGTCTACAAATATGCTTCCTTTCAGGTGGAGAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR GCA 90 bp CTGTTTTGTCCCCATCTAGCCCAGCCAGCTCCACATCTGTCGTGTTaGTCATGTAGAAAGCTCCAAAGAAATCTACAGCACGGATACCAG +
Preference number: 1 (lower is better)
Translates to: LFCPHLAQPAPHLSC*SCRKLQRNLQHGYQ
Trigger: CTGGTATCCGTGCTGTAGATTTCTTTGGAGCTTTCTACATGAGCAACACGACAGATGTGGAGCTGGCTGGGCTAGATGGGGACAAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR CCA 90 bp CTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTaGGTGCCTCCAAACCCCCAATACCGAATCATATACAGTGAACTG +
Preference number: 1 (lower is better)
Translates to: LLGDWSKGTHNIARV*VPPNPQYRIIYSEL
Trigger: CAGTTCACTGTATATGATTCGGTATTGGGGGTTTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR GCA 90 bp TTACATAAGATATGTTACTGTCCCAATTTCTCTGACATCCTGGGGTaGTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCCACTTG +
Preference number: 1 (lower is better)
Translates to: LHKICYCPNFSDILG*FLEASLGPMPFTHL
Trigger: CAAGTGGGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGAGAAATTGGGACAGTAACATATCTTATGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000635550.1
3UTR GCA 90 bp CAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTTTaGAACTCAGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATC +
Preference number: 1 (lower is better)
Translates to: QLERKLVPLPDLNIF*NSVLRSPLTVCLSI
Trigger: GATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACTGAGTTGCAAAATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR CCA 90 bp TACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTaGTACCTCTACCAGATCTTAATATATTTTGCAACTCAGTTCTCC +
Preference number: 1 (lower is better)
Translates to: YRTIQCWGLSSWKGS*YLYQILIYFATQFS
Trigger: GGAGAACTGAGTTGCAAAATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR GCA 90 bp CTTAATATATTTTGCAACTCAGTTCTCCGGTCACCTCTGACAGTGTaGCTCTCTATCCACGGAGTGATCATCAATCATTGCAGGAGAGAG +
Preference number: 1 (lower is better)
Translates to: LNIFCNSVLRSPLTV*LSIHGVIINHCRRE
Trigger: CTCTCTCCTGCAATGATTGATGATCACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACTGAGTTGCAAAATATATTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR GCA 90 bp CCAACAACCTTCTGGACATCACGACGCAGGTCACTCAGGAACCGCTCCTGGTCGGCCCAGTCATCTGGGTaGCAGGGGGCAGAGCTTGAG +
Preference number: 2 (lower is better)
Translates to: PTTFWTSRRRSLRNRSWSAQSSG*QGAELE
Trigger: CTCAAGCTCTGCCCCCTGGCACCCAGATGACTGGGC...CGACCAGGAGCGGTTCCTGAGTGACCTGCGTCGTGATGTCCAGAAGGTTGTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR TCA 90 bp AAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCTCTGCCTAGGCCCAAGAAGGACTaGCCACTTTTCTCTCCACCA +
Preference number: 2 (lower is better)
Translates to: KAQAVSQQERTALQLPLPRPKKD*PLFSPP
Trigger: TGGTGGAGAGAAAAGTGGTCAGTCCTTCTTGGGCCT...AGGCAGAGGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR TCA 90 bp CCAACAACCTTCTGGACATCACGACGCAGGTCACTCAGGAACCGCTCCTGGTCGGAGGAGGCAGCTCACTaGGTTGAGGGCTTGGGATGG +
Preference number: 2 (lower is better)
Translates to: PTTFWTSRRRSLRNRSWSEEAAH*VEGLGW
Trigger: CCATCCCAAGCCCTCAACTCAGTGAGCTGCCTCCTC...CGACCAGGAGCGGTTCCTGAGTGACCTGCGTCGTGATGTCCAGAAGGTTGTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR GCA 90 bp CCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAGAACGGCGCTCCAGCTaGCTCTGCCTCTCTCCCCAA +
Preference number: 2 (lower is better)
Translates to: PLSCPQASWGWKITVSHSERRSS*LCLSPQ
Trigger: TTGGGGAGAGAGGCAGAGGCAGCTGGAGCGCCGTTC...TGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CCA 90 bp AAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCTCTGCCTAGAACCATCCAGTGTTaGGGCCTCTCCAGCTGGAAA +
Preference number: 2 (lower is better)
Translates to: KAQAVSQQERTALQLPLPRTIQC*GLSSWK
Trigger: TTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCT...AGGCAGAGGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CCA 90 bp CAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCCGTGGGAGCTCAGAGTaGGATGTGAACTGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: QYQSPSGVPAGENGAPAARGSSE*DVNWLC
Trigger: ACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACG...GGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR TCA 90 bp CTGTCGGACATAGGCACGGTCATCAGTAGTGACTTCAGCTCCAGGCTGCAGGACGTTGGGCTGGCTCACTaGGGGCCCTCCAAAACTCTG +
Preference number: 2 (lower is better)
Translates to: LSDIGTVISSDFSSRLQDVGLAH*GPSKTL
Trigger: CAGAGTTTTGGAGGGCCCTCAGTGAGCCAGCCCAAC...GTCCTGCAGCCTGGAGCTGAAGTCACTACTGATGACCGTGCCTATGTCCGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR GCA 90 bp TCAAAGCCAACAACCTTCTGGACATCACGACGCAGGTCACTCAGGAACCGCTCCCAGCGGTTTGATGACTaGTGCCAGGGGCACCTGAGC +
Preference number: 2 (lower is better)
Translates to: SKPTTFWTSRRRSLRNRSQRFDD*CQGHLS
Trigger: GCTCAGGTGCCCCTGGCAGCAGTCATCAAACCGCTG...GGAGCGGTTCCTGAGTGACCTGCGTCGTGATGTCCAGAAGGTTGTTGGCTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR GCA 90 bp GCCCCACCCTCCCTAGGTAGAAAGTCTAACAGTGACTTGAGCTCCTCACAGAGGCTCTGGGGGCAGCCTTaGCAGCGGTTTGATGACTGC +
Preference number: 2 (lower is better)
Translates to: APPSLGRKSNSDLSSSQRLWGQP*QRFDDC
Trigger: GCAGTCATCAAACCGCTGGCAAGGCTGCCCCCAGAG...CCTCTGTGAGGAGCTCAAGTCACTGTTAGACTTTCTACCTAGGGAGGGTGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CCA 90 bp CCAACAACCTTCTGGACATCACGACGCAGGTCACTCAGGAACCGCTCCTGGTCGGGAGGTGAAGACACATaGTTGGGCTGGCTCACTGAG +
Preference number: 2 (lower is better)
Translates to: PTTFWTSRRRSLRNRSWSGGEDT*LGWLTE
Trigger: CTCAGTGAGCCAGCCCAACCATGTGTCTTCACCTCC...CGACCAGGAGCGGTTCCTGAGTGACCTGCGTCGTGATGTCCAGAAGGTTGTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CCA 90 bp GGTGATGAGCGTGTCACGAACAGCCTTCACAGGGCTATTCAGGACTCCCCGATAGTGCATAGGTGGCAGTaGTCCCAGGGGCCCAGTCAT +
Preference number: 2 (lower is better)
Translates to: GDERVTNSLHRAIQDSPIVHRWQ*SQGPSH
Trigger: ATGACTGGGCCCCTGGGACCACTGCCACCTATGCAC...TATCGGGGAGTCCTGAATAGCCCTGTGAAGGCTGTTCGTGACACGCTCATCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CCA 90 bp TCAAAGCCAACAACCTTCTGGACATCACGACGCAGGTCACTCAGGAACCGCTCCGTTGAGGGCTTGGGATaGCATCAGGGTCCAGGCGCT +
Preference number: 2 (lower is better)
Translates to: SKPTTFWTSRRRSLRNRSVEGLG*HQGPGA
Trigger: AGCGCCTGGACCCTGATGCCATCCCAAGCCCTCAAC...GGAGCGGTTCCTGAGTGACCTGCGTCGTGATGTCCAGAAGGTTGTTGGCTTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR CAA 90 bp GCCTGGCCACCATCAAGCCTAGCCCTTGTCCTGCCCCCAAGCCAGTaGGGGTTGGAAGATAACTGTCAGCCACTCAGTCAATACCAAAGC +
Preference number: 2 (lower is better)
Translates to: AWPPSSLALVLPPSQ*GLEDNCQPLSQYQS
Trigger: GCTTTGGTATTGACTGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGGCTAGGCTTGATGGTGGCCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR CAA 90 bp CTGACTGAAGGAGGAGACGCTGAAAAGGCTCTGGACAACACCCTGTaGGACGCTTGCTCCCACCCAGAGGAAGAGGTTGAGCCCATTCTC +
Preference number: 2 (lower is better)
Translates to: LTEGGDAEKALDNTL*DACSHPEEEVEPIL
Trigger: GAGAATGGGCTCAACCTCTTCCTCTGGGTGGGAGCAAGCGTCCAACAGGGTGTTGTCCAGAGCCTTTTCAGCGTCTCCTCCTTCAGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR TCA 90 bp CCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCATTCTCCGGTCACCTCTaGCAGTGTGCCTCTCTATCC +
Preference number: 2 (lower is better)
Translates to: PLSCPQASWGWKITVSHSFSGHL*QCASLS
Trigger: GGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAA...TGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR TCA 90 bp CCAACAACCTTCTGGACATCACGACGCAGGTCACTCAGGAACCGCTCCTGGTCGAGTCTAACAGTGACTTaGGCTCCTCACAGAGGAGCC +
Preference number: 2 (lower is better)
Translates to: PTTFWTSRRRSLRNRSWSSLTVT*APHRGA
Trigger: GGCTCCTCTGTGAGGAGCTCAAGTCACTGTTAGACT...CGACCAGGAGCGGTTCCTGAGTGACCTGCGTCGTGATGTCCAGAAGGTTGTTGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CCA 90 bp TCTGACATCCTGGGGTGCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCTCCTGGGGTGCTTTCTaGAAGCTAGCCTGGGCCCTA +
Preference number: 2 (lower is better)
Translates to: SDILGCFLEASLGPMPFTSWGAF*KLAWAL
Trigger: TAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGA...GGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000635550.1
3UTR-3UTR CCA 90 bp AACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGTGGGGCCTCTCCAGCTaGAAAGGAAGCTGGTACCTC +
Preference number: 2 (lower is better)
Translates to: NCQPLSQYQSPSGVPAGEWGLSS*KGSWYL
Trigger: GAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCA...CTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CCA 90 bp AGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTATTGGGGAGCAGGCAAGCCTaGCCACCATCAAGCCTAGCC +
Preference number: 2 (lower is better)
Translates to: SVSRGSSEWDVNWLCEVLGSRQA*PPSSLA
Trigger: GGCTAGGCTTGATGGTGGCCAGGCTTGCCTGCTCCC...CAATACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR CAA 90 bp CCACCATCAAGCCTAGCCCTTGTCCTGCCCCCAAGCCAGTTGGGGTaGGAAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGC +
Preference number: 2 (lower is better)
Translates to: PPSSLALVLPPSQLG*EDNCQPLSQYQSPS
Trigger: GCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGGCTAGGCTTGATGGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR TCA 90 bp CAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCTCTCTATCCACGGAGTaGTCATCAATCATTGCAGGA +
Preference number: 2 (lower is better)
Translates to: QYQSPSGVPAGENGAPAASLSTE*SSIIAG
Trigger: TCCTGCAATGATTGATGATCACTCCGTGGATAGAGA...GGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR TCA 90 bp CTAGCCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCATATGGTAAGGCACTCTaGGTTCAGTCAAGGTGGGGC +
Preference number: 2 (lower is better)
Translates to: LALVLPPSQLGLEDNCQPYGKAL*VQSRWG
Trigger: GCCCCACCTTGACTGAACTCAGAGTGCCTTACCATA...TGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000465076.5
3UTR-3UTR GCA 90 bp CTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTTTGCCAGGGTCTGGGTaGCTCCAAACCCCCAATACC +
Preference number: 2 (lower is better)
Translates to: LTTFLSTTYGLYPSSCAPLPGSG*LQTPNT
Trigger: GGTATTGGGGGTTTGGAGGCACCCAGACCCTGGCAA...AGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR GCA 90 bp TGTCTGAGGCTGGAACAGAGTCTTCTCCTTGTCTGTATTGATCAGCTTCCTGTCGGCTGCTGCGGGGAGTaGATAGGTGGCAGTGGTCCC +
Preference number: 2 (lower is better)
Translates to: CLRLEQSLLLVCIDQLPVGCCGE*IGGSGP
Trigger: GGGACCACTGCCACCTATGCACTCCCCGCAGCAGCC...GACAGGAAGCTGATCAATACAGACAAGGAGAAGACTCTGTTCCAGCCTCAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR GCA 90 bp CTGTCGGACATAGGCACGGTCATCAGTAGTGACTTCAGCTCCAGGCTGCAGGACGAAGGGACACATGTATaGTTTGCAGCGGTTGCAGCG +
Preference number: 2 (lower is better)
Translates to: LSDIGTVISSDFSSRLQDEGTHV*FAAVAA
Trigger: CGCTGCAACCGCTGCAAAGCATACATGTGTCCCTTC...GTCCTGCAGCCTGGAGCTGAAGTCACTACTGATGACCGTGCCTATGTCCGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CCA 90 bp CTCCCTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTAATATTGCCAGGGTCTaGGTGCCTCCAAACCCCCAA +
Preference number: 2 (lower is better)
Translates to: LPTEPSSVGASPAGKEAGNIARV*VPPNPQ
Trigger: TTGGGGGTTTGGAGGCACCCAGACCCTGGCAATATT...ACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CCA 90 bp AACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGCAACAACCCCGGGCCTaGAGAAGCAGTGTTTCTCGT +
Preference number: 2 (lower is better)
Translates to: NCQPLSQYQSPSGVPAGEQQPRA*RSSVSR
Trigger: ACGAGAAACACTGCTTCTCCAGGCCCGGGGTTGTTG...CTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CCA 90 bp GCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCCACTTGCTTTAGCTCATTGGGGCTGATAGCCTaGCTGCTGCGGGGAGTGCAT +
Preference number: 2 (lower is better)
Translates to: AFWKLAWALCHLPTCFSSLGLIA*LLRGVH
Trigger: ATGCACTCCCCGCAGCAGCCAGGCTATCAGCCCCAA...TGAGCTAAAGCAAGTGGGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CCA 90 bp GTATGGAATAGAAAGAGCTTCCCTGCACACTCAGCAGCCTTCAGAGCCTCCATTGCTGACTGCCAAAGGTaGGTGCTGCTGGGTAGGGGC +
Preference number: 2 (lower is better)
Translates to: VWNRKSFPAHSAAFRASIADCQR*VLLGRG
Trigger: GCCCCTACCCAGCAGCACCCACCTTTGGCAGTCAGC...AATGGAGGCTCTGAAGGCTGCTGAGTGTGCAGGGAAGCTCTTTCTATTCCATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR TCA 90 bp ATGAGGCCTCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCCCAGGGGGCAGAGCTTaGGGAGGTGAAGACACATGG +
Preference number: 2 (lower is better)
Translates to: MRPRTFLDSGLSRTGRTLPGGRA*GGEDTW
Trigger: CCATGTGTCTTCACCTCCTCAAGCTCTGCCCCCTGG...GAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR GCA 90 bp TACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTCTGACATCCTGGGGTaGTTTCTGGAAGCTAGCCTG +
Preference number: 2 (lower is better)
Translates to: YRTIQCWGLSSWKGSWYLSDILG*FLEASL
Trigger: CAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA...GAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR GCA 90 bp CCTGGGGCCTCTGCAATGGGCAGGGATGTATGGAATAGAAAGAGCTTCCCTGCATCTGACATCCTGGGGTaGTTTCTGGAAGCTAGCCTG +
Preference number: 2 (lower is better)
Translates to: PGASAMGRDVWNRKSFPASDILG*FLEASL
Trigger: CAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA...TGCAGGGAAGCTCTTTCTATTCCATACATCCCTGCCCATTGCAGAGGCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR GCA 90 bp CTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTTCACCTCTGACAGTGTaGCTCTCTATCCACGGAGTG +
Preference number: 2 (lower is better)
Translates to: LQNHPVLGPLQLERKLVPSPLTV*LSIHGV
Trigger: CACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGA...AGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR GCA 90 bp TGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATGAACGGCGCTCCAGCTaGCTCTGCCTCTCTCCCCAA +
Preference number: 2 (lower is better)
Translates to: WGLSSWKGSWYLYQILIYERRSS*LCLSPQ
Trigger: TTGGGGAGAGAGGCAGAGGCAGCTGGAGCGCCGTTC...ATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CCA 90 bp CAAGAAGGACTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTTGGGGCCTCTCCAGCTaGAAAGGAAGCTGGTACCTC +
Preference number: 2 (lower is better)
Translates to: QEGLTTFLSTTYGLYPSSWGLSS*KGSWYL
Trigger: GAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCA...AGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAGTCCTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CCA 90 bp CTCCCTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTAAGCAGTGTTTCTCGTaGGAGCTCAGAGTGGGATGT +
Preference number: 2 (lower is better)
Translates to: LPTEPSSVGASPAGKEAGKQCFS*ELRVGC
Trigger: ACATCCCACTCTGAGCTCCCACGAGAAACACTGCTT...ACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CCA 90 bp GTACATCGGATGTATCGGGGACTTGCATTCCCTTGGTCTTTCACCAGGAAGTTGCTGAGGGCCCCGGGCTaGTCCGAAGGAACCATTTTG +
Preference number: 2 (lower is better)
Translates to: VHRMYRGLAFPWSFTRKLLRAPG*SEGTIL
Trigger: CAAAATGGTTCCTTCGGACCAGCCCGGGGCCCTCAG...CAACTTCCTGGTGAAAGACCAAGGGAATGCAAGTCCCCGATACATCCGATGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CCA 90 bp GGTGATGAGCGTGTCACGAACAGCCTTCACAGGGCTATTCAGGACTCCCCGATAAAAGGTGGGTGCTGCTaGGTAGGGGCCTCCATAATT +
Preference number: 2 (lower is better)
Translates to: GDERVTNSLHRAIQDSPIKGGCC*VGASII
Trigger: AATTATGGAGGCCCCTACCCAGCAGCACCCACCTTT...TATCGGGGAGTCCTGAATAGCCCTGTGAAGGCTGTTCGTGACACGCTCATCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CCA 90 bp AAGGATCAACTGTCCTGCAGAGGAGGGGCTAGCACAGTTCTTTCTGTAACAGGCTTCAGGGCCAGATTATaGATGCGGAGCCGACGCTGC +
Preference number: 2 (lower is better)
Translates to: KDQLSCRGGASTVLSVTGFRARL*MRSRRC
Trigger: GCAGCGTCGGCTCCGCATCCATAATCTGGCCCTGAA...GCCTGTTACAGAAAGAACTGTGCTAGCCCCTCCTCTGCAGGACAGTTGATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR CAA 90 bp CTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATaGCCAGGGTCTGGGTGCCTCCAAACCCCCAATACCGAATCATAT +
Preference number: 2 (lower is better)
Translates to: LPLSSWETGPKGHII*PGSGCLQTPNTESY
Trigger: ATATGATTCGGTATTGGGGGTTTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR TCA 90 bp CTCTGCCTCTCTCCCCAACAACCCCGGGCCTGGAGAAGCAGTGTTTCTCGTGGGCCGAATCATATACAGTaGACTGAGAAGCTACATTCA +
Preference number: 2 (lower is better)
Translates to: LCLSPQQPRAWRSSVSRGPNHIQ*TEKLHS
Trigger: TGAATGTAGCTTCTCAGTTCACTGTATATGATTCGG...CCCACGAGAAACACTGCTTCTCCAGGCCCGGGGTTGTTGGGGAGAGAGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR TCA 90 bp CTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTGCTCAGAGTGGGATGTaGACTGGCTCTGTGAGGTAT +
Preference number: 2 (lower is better)
Translates to: LTTFLSTTYGLYPSSCAPAQSGM*TGSVRY
Trigger: ATACCTCACAGAGCCAGTTCACATCCCACTCTGAGC...AGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR TCA 90 bp CTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCAAACCTGGGAAGAATaGCAGCAACTGCCCTTGTCC +
Preference number: 2 (lower is better)
Translates to: LLLGDWSKGTHNIARVWVQTWEE*QQLPLS
Trigger: GGACAAGGGCAGTTGCTGTCATTCTTCCCAGGTTTG...CACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465076.5
3UTR-3UTR TCA 90 bp CTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCCGTAAGCTATCAATaGGGCCTCGAACCTTCTTGG +
Preference number: 2 (lower is better)
Translates to: LLLGDWSKGTHNIARVWVPVSYQ*GLEPSW
Trigger: CCAAGAAGGTTCGAGGCCTCATTGATAGCTTACGGG...CACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465076.5
3UTR-3UTR TCA 90 bp ATAACTGCCCGAGACTCATTGACGTTGACCAGGAAGCCATCCAGCAGTGGCACACCCGTAAGCTATCAATaGGGCCTCGAACCTTCTTGG +
Preference number: 2 (lower is better)
Translates to: ITARDSLTLTRKPSSSGTPVSYQ*GLEPSW
Trigger: CCAAGAAGGTTCGAGGCCTCATTGATAGCTTACGGG...TGTGCCACTGCTGGATGGCTTCCTGGTCAACGTCAATGAGTCTCGGGCAGTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR GCA 90 bp TCCTGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGTCTGACATCCTGGGGTaGTTTCTGGAAGCTAGCCTG +
Preference number: 2 (lower is better)
Translates to: SCLPLSSWETGPKGHIILSDILG*FLEASL
Trigger: CAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA...CAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR GCA 90 bp TACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCGTGATCATCAATCATTaGAGGAGAGAGCGAGCGAGC +
Preference number: 2 (lower is better)
Translates to: YRTIQCWGLSSWKGSWYLVIINH*RRERAS
Trigger: GCTCGCTCGCTCTCTCCTGCAATGATTGATGATCAC...GAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR GCA 90 bp TATAGGATGTACATCGGATGTATCGGGGACTTGCATTCCCTTGGTCTTTCACCAACTGCCAAAGGTGGGTaGTGCTGGGTAGGGGCCTCC +
Preference number: 2 (lower is better)
Translates to: YRMYIGCIGDLHSLGLSPTAKGG*CWVGAS
Trigger: GGAGGCCCCTACCCAGCAGCACCCACCTTTGGCAGT...TGGTGAAAGACCAAGGGAATGCAAGTCCCCGATACATCCGATGTACATCCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR GCA 90 bp TGCCATTTACCCACTTGCTTTAGCTCAGTAGCTGCCGAATCTCCTTGTGCATATGGGCCAGATTATGGATaGGGAGCCGACGCTGCCCTG +
Preference number: 2 (lower is better)
Translates to: CHLPTCFSSVAAESPCAYGPDYG*GADAAL
Trigger: CAGGGCAGCGTCGGCTCCGCATCCATAATCTGGCCC...ATATGCACAAGGAGATTCGGCAGCTACTGAGCTAAAGCAAGTGGGTAAATGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CCA 90 bp ATGAGGCCTCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCTCCTGGGGTGCTTTCTaGAAGCTAGCCTGGGCCCTA +
Preference number: 2 (lower is better)
Translates to: MRPRTFLDSGLSRTGRTLSWGAF*KLAWAL
Trigger: TAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGA...GAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
3UTR-3UTR CCA 90 bp TGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCATCTCTCCACCACCTATaGGCTATACCCCAGCTCTTG +
Preference number: 2 (lower is better)
Translates to: CLPLSSWETGPKGHIILPSLHHL*AIPQLL
Trigger: CAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGA...TGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CCA 90 bp TCCTGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGAGAACCATCCAGTGTTaGGGCCTCTCCAGCTGGAAA +
Preference number: 2 (lower is better)
Translates to: SCLPLSSWETGPKGHIILRTIQC*GLSSWK
Trigger: TTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCT...CAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CCA 90 bp AGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTATGCCCCCAAGCCAGTTaGGGTTGGAAGATAACTGTC +
Preference number: 2 (lower is better)
Translates to: SSVSRGSSEWDVNWLCEVCPQAS*GWKITV
Trigger: GACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCA...TACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR TCA 90 bp ATAACTGCCCGAGACTCATTGACGTTGACCAGGAAGCCATCCAGCAGTGGCACACTGTCCCAATTTCTCTaGCATCCTGGGGTGCTTTCT +
Preference number: 2 (lower is better)
Translates to: ITARDSLTLTRKPSSSGTLSQFL*HPGVLS
Trigger: AGAAAGCACCCCAGGATGTCAGAGAAATTGGGACAG...TGTGCCACTGCTGGATGGCTTCCTGGTCAACGTCAATGAGTCTCGGGCAGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR TCA 90 bp AAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGAGGCCCAAGAAGGACTaGCCACTTTTCTCTCCACCA +
Preference number: 2 (lower is better)
Translates to: KITVSHSVNTKAQAVSQQRPKKD*PLFSPP
Trigger: TGGTGGAGAGAAAAGTGGTCAGTCCTTCTTGGGCCT...CTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR TCA 90 bp TGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAAGAGCGAGCGAGCAGTaGAAGCAGAGAAACTTGACT +
Preference number: 2 (lower is better)
Translates to: CLPLSSWETGPKGHIILPRASEQ*KQRNLT
Trigger: AGTCAAGTTTCTCTGCTTTCACTGCTCGCTCGCTCT...TGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR GCA 90 bp CAGAGTGGCAGGATACTTGAGCCCAGAAAGAAGGTGTCTCCTTATATCTCCCCCTCTGACATCCTGGGGTaGTTTCTGGAAGCTAGCCTG +
Preference number: 2 (lower is better)
Translates to: QSGRILEPRKKVSPYISPSDILG*FLEASL
Trigger: CAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA...GGGGGAGATATAAGGAGACACCTTCTTTCTGGGCTCAAGTATCCTGCCACTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR GCA 90 bp CTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTGTGATCATCAATCATTaGAGGAGAGAGCGAGCGAGC +
Preference number: 2 (lower is better)
Translates to: LTTFLSTTYGLYPSSCAPVIINH*RRERAS
Trigger: GCTCGCTCGCTCTCTCCTGCAATGATTGATGATCAC...AGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR GCA 90 bp AGAAGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGGCTCTGTGAGGTATTaGAAGTTGATGACCAGGCTC +
Preference number: 2 (lower is better)
Translates to: RSSVSRGSSEWDVNWLCEGSVRY*KLMTRL
Trigger: GAGCCTGGTCATCAACTTGCAATACCTCACAGAGCC...CTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR GCA 90 bp CCCACCCAGAGGAAGAGGTTGAGCCCATTCTCCAGTAAATATATATCCCCATTGCAGCACGGATACCAGTaGTTGTCCGGACCCGCATCA +
Preference number: 2 (lower is better)
Translates to: PTQRKRLSPFSSKYISPLQHGYQ*LSGPAS
Trigger: TGATGCGGGTCCGGACAAGCACTGGTATCCGTGCTG...CAATGGGGATATATATTTACTGGAGAATGGGCTCAACCTCTTCCTCTGGGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CCA 90 bp AGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATCCACGGAGTGATCATCAATTCTGGAAGCTAGCCTaGGCCCTATGCCATTTACCC +
Preference number: 2 (lower is better)
Translates to: SSPVTSDSVPLYPRSDHQFWKLA*ALCHLP
Trigger: GGGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAA...TTGATGATCACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CCA 90 bp TGGAAGCTAGCCTGGGCCCTATGCCATTTACCCACTTGCTTTAGCTCAGTAGCTTTCTGGAAGCTAGCCTaGGCCCTATGCCATTTACCC +
Preference number: 2 (lower is better)
Translates to: WKLAWALCHLPTCFSSVAFWKLA*ALCHLP
Trigger: GGGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAA...AGCTACTGAGCTAAAGCAAGTGGGTAAATGGCATAGGGCCCAGGCTAGCTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
3UTR-3UTR CCA 90 bp GTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATAATATTGCCAGGGTCTaGGTGCCTCCAAACCCCCAA +
Preference number: 2 (lower is better)
Translates to: VLGPLQLERKLVPLPDLNNIARV*VPPNPQ
Trigger: TTGGGGGTTTGGAGGCACCCAGACCCTGGCAATATT...ATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CCA 90 bp TCTGACATCCTGGGGTGCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCCTCCTCTTGGGAGACTaGTCCAAAGGGACACATAAT +
Preference number: 2 (lower is better)
Translates to: SDILGCFLEASLGPMPFTLLLGD*SKGTHN
Trigger: ATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAG...GGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CCA 90 bp AGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTATTGTCTCTCCACCACCTATaGGCTATACCCCAGCTCTTG +
Preference number: 2 (lower is better)
Translates to: SVSRGSSEWDVNWLCEVLSLHHL*AIPQLL
Trigger: CAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGA...CAATACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CCA 90 bp AGAAGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGAAGCAGTGTTTCTCGTaGGAGCTCAGAGTGGGATGT +
Preference number: 2 (lower is better)
Translates to: RSSVSRGSSEWDVNWLCEKQCFS*ELRVGC
Trigger: ACATCCCACTCTGAGCTCCCACGAGAAACACTGCTT...CTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CCA 90 bp GTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATTGCCCCCAAGCCAGTTaGGGTTGGAAGATAACTGTC +
Preference number: 2 (lower is better)
Translates to: VLGPLQLERKLVPLPDLNCPQAS*GWKITV
Trigger: GACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCA...ATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CCA 90 bp GCCCCACCCTCCCTAGGTAGAAAGTCTAACAGTGACTTGAGCTCCTCACAGAGGGGCCTCGAACCTTCTTaGACAGTGGATTATCCAGAA +
Preference number: 2 (lower is better)
Translates to: APPSLGRKSNSDLSSSQRGLEPS*TVDYPE
Trigger: TTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCC...CCTCTGTGAGGAGCTCAAGTCACTGTTAGACTTTCTACCTAGGGAGGGTGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR TCA 90 bp AAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGCTGTCCCAATTTCTCTaGCATCCTGGGGTGCTTTCT +
Preference number: 2 (lower is better)
Translates to: KITVSHSVNTKAQAVSQQLSQFL*HPGVLS
Trigger: AGAAAGCACCCCAGGATGTCAGAGAAATTGGGACAG...CTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR TCA 90 bp AGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATCCACGGAGTGATCATCAACTGTCCCAATTTCTCTaGCATCCTGGGGTGCTTTCT +
Preference number: 2 (lower is better)
Translates to: SSPVTSDSVPLYPRSDHQLSQFL*HPGVLS
Trigger: AGAAAGCACCCCAGGATGTCAGAGAAATTGGGACAG...TTGATGATCACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR TCA 90 bp CTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTTCTCTATCCACGGAGTaGTCATCAATCATTGCAGGA +
Preference number: 2 (lower is better)
Translates to: LQNHPVLGPLQLERKLVPSLSTE*SSIIAG
Trigger: TCCTGCAATGATTGATGATCACTCCGTGGATAGAGA...AGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR TCA 90 bp GCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCTCAGAGTGGGATGTaGACTGGCTCTGTGAGGTAT +
Preference number: 2 (lower is better)
Translates to: ASWGWKITVSHSVNTKAQAQSGM*TGSVRY
Trigger: ATACCTCACAGAGCCAGTTCACATCCCACTCTGAGC...TTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR TCA 90 bp TGCCATTTACCCACTTGCTTTAGCTCAGTAGCTGCCGAATCTCCTTGTGCATATGGCAGCTCACTGAGTTaGGGGCTTGGGATGGCATCA +
Preference number: 2 (lower is better)
Translates to: CHLPTCFSSVAAESPCAYGSSLS*GLGMAS
Trigger: TGATGCCATCCCAAGCCCTCAACTCAGTGAGCTGCC...ATATGCACAAGGAGATTCGGCAGCTACTGAGCTAAAGCAAGTGGGTAAATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR GCA 90 bp CCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAATACCCCAGCTCTTGTaGACCTATATGTTTTATCCC +
Preference number: 2 (lower is better)
Translates to: PLSCPQASWGWKITVSHSIPQLL*TYMFYP
Trigger: GGGATAAAACATATAGGTGCACAAGAGCTGGGGTAT...TGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR GCA 90 bp AAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGGCTCTGTGAGGTATTaGAAGTTGATGACCAGGCTC +
Preference number: 2 (lower is better)
Translates to: KITVSHSVNTKAQAVSQQGSVRY*KLMTRL
Trigger: GAGCCTGGTCATCAACTTGCAATACCTCACAGAGCC...CTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR GCA 90 bp TCCTGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGTCTTCCACCAGGAAGTaGTTGAACAGCATCTCCATC +
Preference number: 2 (lower is better)
Translates to: SCLPLSSWETGPKGHIILSSTRK*LNSISI
Trigger: GATGGAGATGCTGTTCAAGCACTTCCTGGTGGAAGA...CAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465076.5
3UTR-3UTR GCA 90 bp ATAACTGCCCGAGACTCATTGACGTTGACCAGGAAGCCATCCAGCAGTGGCACATCTTCCACCAGGAAGTaGTTGAACAGCATCTCCATC +
Preference number: 2 (lower is better)
Translates to: ITARDSLTLTRKPSSSGTSSTRK*LNSISI
Trigger: GATGGAGATGCTGTTCAAGCACTTCCTGGTGGAAGA...TGTGCCACTGCTGGATGGCTTCCTGGTCAACGTCAATGAGTCTCGGGCAGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR GCA 90 bp GCCCCACCCTCCCTAGGTAGAAAGTCTAACAGTGACTTGAGCTCCTCACAGAGGAAAGTCCACATAAGATaGTCCCCCACTCAGACTCTT +
Preference number: 2 (lower is better)
Translates to: APPSLGRKSNSDLSSSQRKVHIR*SPTQTL
Trigger: AAGAGTCTGAGTGGGGGAGCATCTTATGTGGACTTT...CCTCTGTGAGGAGCTCAAGTCACTGTTAGACTTTCTACCTAGGGAGGGTGGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR GCA 90 bp TTCCCTGGGGCCTCTGCAATGGGCAGGGATGTATGGAATAGAAAGAGCTTCCCTGATGTATCGGGGACTTaGATTCCCTTGGTCTTTCAC +
Preference number: 2 (lower is better)
Translates to: FPGASAMGRDVWNRKSFPDVSGT*IPLVFH
Trigger: GTGAAAGACCAAGGGAATGCAAGTCCCCGATACATC...AGGGAAGCTCTTTCTATTCCATACATCCCTGCCCATTGCAGAGGCCCCAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR GCA 90 bp GTATGGAATAGAAAGAGCTTCCCTGCACACTCAGCAGCCTTCAGAGCCTCCATTATGCTTTGCAGCGGTTaGAGCGCAAAGGGCCAGATT +
Preference number: 2 (lower is better)
Translates to: VWNRKSFPAHSAAFRASIMLCSG*SAKGQI
Trigger: AATCTGGCCCTTTGCGCTGCAACCGCTGCAAAGCAT...AATGGAGGCTCTGAAGGCTGCTGAGTGTGCAGGGAAGCTCTTTCTATTCCATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR GCA 90 bp GCAGGGATGTATGGAATAGAAAGAGCTTCCCTGCACACTCAGCAGCCTTCAGAGAAGCATCCACACGTTTaGCGGTATGATCCAGGTGCT +
Preference number: 2 (lower is better)
Translates to: AGMYGIERASLHTQQPSEKHPHV*RYDPGA
Trigger: AGCACCTGGATCATACCGGCAAACGTGTGGATGCTT...CTCTGAAGGCTGCTGAGTGTGCAGGGAAGCTCTTTCTATTCCATACATCCCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CCA 90 bp GCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAATTCTGGAAGCTAGCCTaGGCCCTATGCCATTTACCC +
Preference number: 2 (lower is better)
Translates to: ASWGWKITVSHSVNTKAQFWKLA*ALCHLP
Trigger: GGGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAA...TTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CCA 90 bp AGAAACTTGACTGCTAACCTCCAGGCCCAAGAAGGACTGACCACTTTTCTCTCCAATATTGCCAGGGTCTaGGTGCCTCCAAACCCCCAA +
Preference number: 2 (lower is better)
Translates to: RNLTANLQAQEGLTTFLSNIARV*VPPNPQ
Trigger: TTGGGGGTTTGGAGGCACCCAGACCCTGGCAATATT...GGAGAGAAAAGTGGTCAGTCCTTCTTGGGCCTGGAGGTTAGCAGTCAAGTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CCA 90 bp TCTGACATCCTGGGGTGCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCAACCTTCTTGGACAGTaGATTATCCAGAACTGGCAG +
Preference number: 2 (lower is better)
Translates to: SDILGCFLEASLGPMPFTNLLGQ*IIQNWQ
Trigger: CTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTT...GGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
3UTR-3UTR CCA 90 bp GAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCAAACCACTGGTCTACACAGCAGCCTTaGGCCACACACTCTTTGGCC +
Preference number: 2 (lower is better)
Translates to: EPSWTVDYPELAEHSNHWSTQQP*ATHSLA
Trigger: GGCCAAAGAGTGTGTGGCCCAAGGCTGCTGTGTAGA...CCAGTGGTTTGAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR TCA 90 bp AGAAACTTGACTGCTAACCTCCAGGCCCAAGAAGGACTGACCACTTTTCTCTCCCTGTCCCAATTTCTCTaGCATCCTGGGGTGCTTTCT +
Preference number: 2 (lower is better)
Translates to: RNLTANLQAQEGLTTFLSLSQFL*HPGVLS
Trigger: AGAAAGCACCCCAGGATGTCAGAGAAATTGGGACAG...GGAGAGAAAAGTGGTCAGTCCTTCTTGGGCCTGGAGGTTAGCAGTCAAGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR TCA 90 bp GCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAAGAGCGAGCGAGCAGTaGAAGCAGAGAAACTTGACT +
Preference number: 2 (lower is better)
Translates to: ASWGWKITVSHSVNTKAQRASEQ*KQRNLT
Trigger: AGTCAAGTTTCTCTGCTTTCACTGCTCGCTCGCTCT...TTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR TCA 90 bp TGGAAGCTAGCCTGGGCCCTATGCCATTTACCCACTTGCTTTAGCTCAGTAGCTTCCCCAAGTGTTCCCTaGTATTTGAGGGTACTAGCA +
Preference number: 2 (lower is better)
Translates to: WKLAWALCHLPTCFSSVASPSVP*YLRVLA
Trigger: TGCTAGTACCCTCAAATATCAGGGAACACTTGGGGA...AGCTACTGAGCTAAAGCAAGTGGGTAAATGGCATAGGGCCCAGGCTAGCTTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465076.5
3UTR-3UTR TCA 90 bp TGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCACATGTATGCATCATCTaGAACAGGCAAACCTGGGAA +
Preference number: 2 (lower is better)
Translates to: CLPLSSWETGPKGHIILPHVCII*NRQTWE
Trigger: TTCCCAGGTTTGCCTGTTTCAGATGATGCATACATG...TGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465076.5
3UTR-3UTR GCA 90 bp AGCCATCCAGCAGTGGCACAAACATGTCAGCCACATCAGACACAACCATCATCTCTAGCCTGGGCCCTATaGCATTTACCCACTTGCTTT +
Preference number: 2 (lower is better)
Translates to: SHPAVAQTCQPHQTQPSSLAWAL*HLPTCF
Trigger: AAAGCAAGTGGGTAAATGGCATAGGGCCCAGGCTAG...AGATGATGGTTGTGTCTGATGTGGCTGACATGTTTGTGCCACTGCTGGATGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CCA 90 bp GTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATCTCCTCTTGGGAGACTaGTCCAAAGGGACACATAAT +
Preference number: 2 (lower is better)
Translates to: VLGPLQLERKLVPLPDLNLLLGD*SKGTHN
Trigger: ATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAG...ATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CCA 90 bp CAAGAAGGACTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTCTCCTCTTGGGAGACTaGTCCAAAGGGACACATAAT +
Preference number: 2 (lower is better)
Translates to: QEGLTTFLSTTYGLYPSSLLLGD*SKGTHN
Trigger: ATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAG...AGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAGTCCTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CCA 90 bp CCCACCCAGAGGAAGAGGTTGAGCCCATTCTCCAGTAAATATATATCCCCATTGCTGGGGCCTCTGCAATaGGCAGGGATGTATGGAATA +
Preference number: 2 (lower is better)
Translates to: PTQRKRLSPFSSKYISPLLGPLQ*AGMYGI
Trigger: TATTCCATACATCCCTGCCCATTGCAGAGGCCCCAG...CAATGGGGATATATATTTACTGGAGAATGGGCTCAACCTCTTCCTCTGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR CAA 90 bp AGACTCTTGTCTTCCACCAGGAAGTGCTTGAACAGCATCTCCATCTaGTCTTCCTGTTTCACCACGGTAAGCTTCATGTACCGGGATCTC +
Preference number: 2 (lower is better)
Translates to: RLLSSTRKCLNSISI*SSCFTTVSFMYRDL
Trigger: GAGATCCCGGTACATGAAGCTTACCGTGGTGAAACAGGAAGACAAGATGGAGATGCTGTTCAAGCACTTCCTGGTGGAAGACAAGAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
3UTR CAA 90 bp CAGAGGAAGAGGTTGAGCCCATTCTCCAGTAAATATATATCCCCATaGCTTAGACGCTCTTCAGAGGCTCGAACTGCTGGTGGTTCGGTA +
Preference number: 2 (lower is better)
Translates to: QRKRLSPFSSKYISP*LRRSSEARTAGGSV
Trigger: TACCGAACCACCAGCAGTTCGAGCCTCTGAAGAGCGTCTAAGCAATGGGGATATATATTTACTGGAGAATGGGCTCAACCTCTTCCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR TCA 90 bp AAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGTCTCTATCCACGGAGTaGTCATCAATCATTGCAGGA +
Preference number: 2 (lower is better)
Translates to: KITVSHSVNTKAQAVSQQSLSTE*SSIIAG
Trigger: TCCTGCAATGATTGATGATCACTCCGTGGATAGAGA...CTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR TCA 90 bp CAGATGTGCAAGGGATATTATAGGATGTACATCGGATGTATCGGGGACTTGCATCAGAGCTTGAGGAGGTaGAGACACATGGTTGGGCTG +
Preference number: 2 (lower is better)
Translates to: QMCKGYYRMYIGCIGDLHQSLRR*RHMVGL
Trigger: CAGCCCAACCATGTGTCTTCACCTCCTCAAGCTCTG...ATGCAAGTCCCCGATACATCCGATGTACATCCTATAATATCCCTTGCACATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CCA 90 bp AAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGAGCTGGAAAGGAAGCTaGTACCTCTACCAGATCTTA +
Preference number: 2 (lower is better)
Translates to: KITVSHSVNTKAQAVSQQSWKGS*YLYQIL
Trigger: TAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCT...CTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CCA 90 bp AGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTATTGAACCTTCTTGGACAGTaGATTATCCAGAACTGGCAG +
Preference number: 2 (lower is better)
Translates to: SVSRGSSEWDVNWLCEVLNLLGQ*IIQNWQ
Trigger: CTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTT...CAATACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465076.5
3UTR-3UTR CCA 90 bp AGGGTCTGGGTGCCTCCAAACCCCCAATACCGAATCATATACAGTGAACTGAGAGGCCTCGAACCTTCTTaGACAGTGGATTATCCAGAA +
Preference number: 2 (lower is better)
Translates to: RVWVPPNPQYRIIYSELRGLEPS*TVDYPE
Trigger: TTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCC...TCTCAGTTCACTGTATATGATTCGGTATTGGGGGTTTGGAGGCACCCAGACCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465076.5
3UTR-3UTR CCA 90 bp GAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCAAACCACTGGGGTCTATTCTGTGCCTaGTTTTCTGCTGAGGAGGCA +
Preference number: 2 (lower is better)
Translates to: EPSWTVDYPELAEHSNHWGLFCA*FSAEEA
Trigger: TGCCTCCTCAGCAGAAAACCAGGCACAGAATAGACC...CCAGTGGTTTGAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CCA 90 bp TGCCATTTACCCACTTGCTTTAGCTCAGTAGCTGCCGAATCTCCTTGTGCATATGGGCCAGATTCCCCATaGTCCACAACATACGGTGAA +
Preference number: 2 (lower is better)
Translates to: CHLPTCFSSVAAESPCAYGPDSP*STTYGE
Trigger: TTCACCGTATGTTGTGGACCATGGGGAATCTGGCCC...ATATGCACAAGGAGATTCGGCAGCTACTGAGCTAAAGCAAGTGGGTAAATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CCA 90 bp CTATCAATGAGGCCTCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAAAGCCAACAACCTTCTaGACATCACGACGCAGGTCA +
Preference number: 2 (lower is better)
Translates to: LSMRPRTFLDSGLSRTGRKPTTF*TSRRRS
Trigger: TGACCTGCGTCGTGATGTCCAGAAGGTTGTTGGCTT...TCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCCTCATTGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CCA 90 bp TCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCAAACCACTGGCTCGAACTGCTGGTaGTTCGGTAGTACTCTCAAC +
Preference number: 2 (lower is better)
Translates to: SNLLGQWIIQNWQNTQTTGSNCW*FGSTLN
Trigger: GTTGAGAGTACTACCGAACCACCAGCAGTTCGAGCC...AGTGGTTTGAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CCA 90 bp TGCCATTTACCCACTTGCTTTAGCTCAGTAGCTGCCGAATCTCCTTGTGCATATAGAGGCTCGAACTGCTaGTGGTTCGGTAGTACTCTC +
Preference number: 2 (lower is better)
Translates to: CHLPTCFSSVAAESPCAYRGSNC*WFGSTL
Trigger: GAGAGTACTACCGAACCACCAGCAGTTCGAGCCTCT...ATATGCACAAGGAGATTCGGCAGCTACTGAGCTAAAGCAAGTGGGTAAATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR GCA 90 bp CTAGCCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCAGATCTTAATATATTTTaGAACTCAGTTCTCCGGTCA +
Preference number: 2 (lower is better)
Translates to: LALVLPPSQLGLEDNCQPDLNIF*NSVLRS
Trigger: TGACCGGAGAACTGAGTTGCAAAATATATTAAGATC...TGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGGCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR GCA 90 bp ATAACTGCCCGAGACTCATTGACGTTGACCAGGAAGCCATCCAGCAGTGGCACAGGAACTTATTGTTCTTaGAGTAATCTACAGTGGCCA +
Preference number: 2 (lower is better)
Translates to: ITARDSLTLTRKPSSSGTGTYCS*SNLQWP
Trigger: TGGCCACTGTAGATTACTGCAAGAACAATAAGTTCC...TGTGCCACTGCTGGATGGCTTCCTGGTCAACGTCAATGAGTCTCGGGCAGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CCA 90 bp AGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATCCACGGAGTGATCATCAATGGATTATCCAGAACTaGCAGAACACTCTAGAACAC +
Preference number: 2 (lower is better)
Translates to: SSPVTSDSVPLYPRSDHQWIIQN*QNTLEH
Trigger: GTGTTCTAGAGTGTTCTGCCAGTTCTGGATAATCCA...TTGATGATCACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465076.5
3UTR-3UTR GCA 90 bp CTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTGATCTTAATATATTTTaGAACTCAGTTCTCCGGTCA +
Preference number: 2 (lower is better)
Translates to: LQNHPVLGPLQLERKLVPDLNIF*NSVLRS
Trigger: TGACCGGAGAACTGAGTTGCAAAATATATTAAGATC...AGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR GCA 90 bp TGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATAAAGTCCACATAAGATaGTCCCCCACTCAGACTCTT +
Preference number: 2 (lower is better)
Translates to: WGLSSWKGSWYLYQILIYKVHIR*SPTQTL
Trigger: AAGAGTCTGAGTGGGGGAGCATCTTATGTGGACTTT...ATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465076.5
3UTR-3UTR CCA 90 bp CTATCAATGAGGCCTCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAGCCTCCATTCCAGCCTaGATAACTGGTACAAATACT +
Preference number: 2 (lower is better)
Translates to: LSMRPRTFLDSGLSRTGRASIPA*ITGTNT
Trigger: AGTATTTGTACCAGTTATCCAGGCTGGAATGGAGGC...TCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCCTCATTGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR GCA 90 bp TGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATATACCCCAGCTCTTGTaGACCTATATGTTTTATCCC +
Preference number: 2 (lower is better)
Translates to: WGLSSWKGSWYLYQILIYIPQLL*TYMFYP
Trigger: GGGATAAAACATATAGGTGCACAAGAGCTGGGGTAT...ATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CCA 90 bp TCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCAAACCACTTTCAATGACCTGAATTaGACTAGGAATGGCATCGGG +
Preference number: 2 (lower is better)
Translates to: SNLLGQWIIQNWQNTQTTFNDLN*TRNGIG
Trigger: CCCGATGCCATTCCTAGTCCAATTCAGGTCATTGAA...AGTGGTTTGAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CCA 90 bp CTATCAATGAGGCCTCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGATCCAGCCTGGATAACTaGTACAAATACTGTCTCTGT +
Preference number: 2 (lower is better)
Translates to: LSMRPRTFLDSGLSRTGRSSLDN*YKYCLC
Trigger: ACAGAGACAGTATTTGTACCAGTTATCCAGGCTGGA...TCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCCTCATTGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CCA 90 bp CCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTTTGCAGCTGGAAAGGAAGCTaGTACCTCTACCAGATCTTA +
Preference number: 2 (lower is better)
Translates to: PLQLERKLVPLPDLNIFCSWKGS*YLYQIL
Trigger: TAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCT...GCAAAATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR TCA 90 bp GAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCAAACCACTGGAACATTTCTGGAATCTaGTCCAATAAGCTGGTGATA +
Preference number: 2 (lower is better)
Translates to: EPSWTVDYPELAEHSNHWNISGI*SNKLVI
Trigger: TATCACCAGCTTATTGGATCAGATTCCAGAAATGTT...CCAGTGGTTTGAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR GCA 90 bp TGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATGATCTTAATATATTTTaGAACTCAGTTCTCCGGTCA +
Preference number: 2 (lower is better)
Translates to: WGLSSWKGSWYLYQILIYDLNIF*NSVLRS
Trigger: TGACCGGAGAACTGAGTTGCAAAATATATTAAGATC...ATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR CCA 72 bp ATAGCCTGGCTGCTGCGGGGAGTGCATAGGTGGCAGTaGTCCCAGGGGCCCAGTCATCTGGGTGCCAGGGGG +
Preference number: 3 (lower is better)
Translates to: IAWLLRGVHRWQ*SQGPSHLGARG
Trigger: CCCCCTGGCACCCAGATGACTGGGCCCCTGGGACCACTGCCACCTATGCACTCCCCGCAGCAGCCAGGCTAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR GCA 72 bp TGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCTCTaGCTCTCTCCCCAACAACCCCGGGCCTGGAGAAGC +
Preference number: 3 (lower is better)
Translates to: CPSRRERRSSCL*LSPQQPRAWRS
Trigger: GCTTCTCCAGGCCCGGGGTTGTTGGGGAGAGAGGCAGAGGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR GCA 72 bp CTCCTCTGGGGGCAGCCTTGCCAGCGGTTTGATGACTaGTGCCAGGGGCACCTGAGCCTGCTTAGCCATGTC +
Preference number: 3 (lower is better)
Translates to: LLWGQPCQRFDD*CQGHLSLLSHV
Trigger: GACATGGCTAAGCAGGCTCAGGTGCCCCTGGCAGCAGTCATCAAACCGCTGGCAAGGCTGCCCCCAGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR TCA 72 bp AGGGGCCCAGTCATCTGGGTGCCAGGGGGCAGAGCTTaGGGAGGTGAAGACACATGGTTGGGCTGGCTCACT +
Preference number: 3 (lower is better)
Translates to: RGPVIWVPGGRA*GGEDTWLGWLT
Trigger: AGTGAGCCAGCCCAACCATGTGTCTTCACCTCCTCAAGCTCTGCCCCCTGGCACCCAGATGACTGGGCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR GCA 72 bp CAGGGCCAGATTATGGATGCGGAGCCGACGCTGCCCTaGACAGCTGGTGTAAAGCAGGGCACACTGCAGGAG +
Preference number: 3 (lower is better)
Translates to: QGQIMDAEPTLP*TAGVKQGTLQE
Trigger: CTCCTGCAGTGTGCCCTGCTTTACACCAGCTGTGCAGGGCAGCGTCGGCTCCGCATCCATAATCTGGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR CCA 72 bp GATTATGGATGCGGAGCCGACGCTGCCCTGCACAGCTaGTGTAAAGCAGGGCACACTGCAGGAGAGCTCCGC +
Preference number: 3 (lower is better)
Translates to: DYGCGADAALHS*CKAGHTAGELR
Trigger: GCGGAGCTCTCCTGCAGTGTGCCCTGCTTTACACCAGCTGTGCAGGGCAGCGTCGGCTCCGCATCCATAATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR CCA 72 bp TTGCAGCGGTTGCAGCGCAAAGGGCCAGATTCCCCATaGTCCACAACATACGGTGAAGCCTCCTCTGGGGGC +
Preference number: 3 (lower is better)
Translates to: LQRLQRKGPDSP*STTYGEASSGG
Trigger: GCCCCCAGAGGAGGCTTCACCGTATGTTGTGGACCATGGGGAATCTGGCCCTTTGCGCTGCAACCGCTGCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CAA 90 bp CTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTCCTGCCCCTCTCCTCTaGGGAGACTGGTCCAAAGGG +
Preference number: 3 (lower is better)
Translates to: LTTFLSTTYGLYPSSCAPPAPLL*GDWSKG
Trigger: CCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGG...AGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CAA 90 bp CTCTGCCTCTCTCCCCAACAACCCCGGGCCTGGAGAAGCAGTGTTTCTCGTGGGAGTGATCATCAATCATaGCAGGAGAGAGCGAGCGAG +
Preference number: 3 (lower is better)
Translates to: LCLSPQQPRAWRSSVSRGSDHQS*QERASE
Trigger: CTCGCTCGCTCTCTCCTGCAATGATTGATGATCACT...CCCACGAGAAACACTGCTTCTCCAGGCCCGGGGTTGTTGGGGAGAGAGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CAA 90 bp CTGTCGGACATAGGCACGGTCATCAGTAGTGACTTCAGCTCCAGGCTGCAGGACCAAAGCCAACGCGGATaGCTGACTCTTCTGCCCCAC +
Preference number: 3 (lower is better)
Translates to: LSDIGTVISSDFSSRLQDQSQRG*LTLLPH
Trigger: GTGGGGCAGAAGAGTCAGCAATCCGCGTTGGCTTTG...GTCCTGCAGCCTGGAGCTGAAGTCACTACTGATGACCGTGCCTATGTCCGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR CCA 72 bp CGGACCCGCATCACAGCATCAAAGCCAACAACCTTCTaGACATCACGACGCAGGTCACTCAGGAACCGCTCC +
Preference number: 3 (lower is better)
Translates to: RTRITASKPTTF*TSRRRSLRNRS
Trigger: GGAGCGGTTCCTGAGTGACCTGCGTCGTGATGTCCAGAAGGTTGTTGGCTTTGATGCTGTGATGCGGGTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CAA 90 bp CTCCCTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTCTGCCCCCAAGCCAGTaGGGGTTGGAAGATAACTGT +
Preference number: 3 (lower is better)
Translates to: LPTEPSSVGASPAGKEAGLPPSQ*GLEDNC
Trigger: ACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAG...ACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CAA 90 bp GCAGGGATGTATGGAATAGAAAGAGCTTCCCTGCACACTCAGCAGCCTTCAGAGAGCCTTGCCAGCGGTTaGATGACTGCTGCCAGGGGC +
Preference number: 3 (lower is better)
Translates to: AGMYGIERASLHTQQPSESLASG*MTAARG
Trigger: GCCCCTGGCAGCAGTCATCAAACCGCTGGCAAGGCT...CTCTGAAGGCTGCTGAGTGTGCAGGGAAGCTCTTTCTATTCCATACATCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR CCA 72 bp AGAGATCTACACAGCAGCCTTGGGCCACACACTCTTTaGCCAGGGTCTGATAGGCACCTGTCTGAGGCTGGA +
Preference number: 3 (lower is better)
Translates to: RDLHSSLGPHTL*PGSDRHLSEAG
Trigger: TCCAGCCTCAGACAGGTGCCTATCAGACCCTGGCCAAAGAGTGTGTGGCCCAAGGCTGCTGTGTAGATCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CAA 90 bp GCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAACCTGCCCCTCTCCTCTaGGGAGACTGGTCCAAAGGG +
Preference number: 3 (lower is better)
Translates to: ASWGWKITVSHSVNTKAQPAPLL*GDWSKG
Trigger: CCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGG...TTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CAA 90 bp CTCCCTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTGTGAGGTATTGCAAGTaGATGACCAGGCTCCCTAGG +
Preference number: 3 (lower is better)
Translates to: LPTEPSSVGASPAGKEAGVRYCK*MTRLPR
Trigger: CCTAGGGAGCCTGGTCATCAACTTGCAATACCTCAC...ACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR GCA 72 bp TCCTGGGGTGCTTTCTGGAAGCTAGCCTGGGCCCTATaGCATTTACCCACTTGCTTTAGCTCAGTAGCTGCC +
Preference number: 3 (lower is better)
Translates to: SWGAFWKLAWAL*HLPTCFSSVAA
Trigger: GGCAGCTACTGAGCTAAAGCAAGTGGGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
3UTR CCA 72 bp AGTTTCCCTGGGGCCTCTGCAATGGGCAGGGATGTATaGAATAGAAAGAGCTTCCCTGCACACTCAGCAGCC +
Preference number: 3 (lower is better)
Translates to: SFPGASAMGRDV*NRKSFPAHSAA
Trigger: GGCTGCTGAGTGTGCAGGGAAGCTCTTTCTATTCCATACATCCCTGCCCATTGCAGAGGCCCCAGGGAAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CAA 90 bp TCTGACATCCTGGGGTGCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCAAGGGACACATAATATaGCCAGGGTCTGGGTGCCTC +
Preference number: 3 (lower is better)
Translates to: SDILGCFLEASLGPMPFTKGHII*PGSGCL
Trigger: GAGGCACCCAGACCCTGGCAATATTATGTGTCCCTT...GGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CAA 90 bp CCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAAGTGATCATCAATCATaGCAGGAGAGAGCGAGCGAG +
Preference number: 3 (lower is better)
Translates to: PLSCPQASWGWKITVSHSSDHQS*QERASE
Trigger: CTCGCTCGCTCTCTCCTGCAATGATTGATGATCACT...TGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CAA 90 bp GTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATCAGAACCATCCAGTGTaGGGGCCTCTCCAGCTGGAA +
Preference number: 3 (lower is better)
Translates to: VLGPLQLERKLVPLPDLNQNHPV*GPLQLE
Trigger: TTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTG...ATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR CCA 72 bp TTCACCAGGAAGTTGGTAGTGACTAAGGGTGGCACCTaGCCCCGTACTCCAGTAACAAATGGCTCTGTACCC +
Preference number: 3 (lower is better)
Translates to: FTRKLVVTKGGT*PRTPVTNGSVP
Trigger: GGGTACAGAGCCATTTGTTACTGGAGTACGGGGCCAGGTGCCACCCTTAGTCACTACCAACTTCCTGGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CAA 90 bp GCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAACAGAACCATCCAGTGTaGGGGCCTCTCCAGCTGGAA +
Preference number: 3 (lower is better)
Translates to: ASWGWKITVSHSVNTKAQQNHPV*GPLQLE
Trigger: TTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTG...TTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CAA 90 bp GAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAACAGCATCTCCATCTaGTCTTCCTGTTTCACCACG +
Preference number: 3 (lower is better)
Translates to: EPSSVGASPAGKEAGTSTNSISI*SSCFTT
Trigger: CGTGGTGAAACAGGAAGACAAGATGGAGATGCTGTT...GGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465076.5
3UTR-3UTR CAA 90 bp GTACATCGGATGTATCGGGGACTTGCATTCCCTTGGTCTTTCACCAGGAAGTTGAGGCAGCTCACTGAGTaGAGGGCTTGGGATGGCATC +
Preference number: 3 (lower is better)
Translates to: VHRMYRGLAFPWSFTRKLRQLTE*RAWDGI
Trigger: GATGCCATCCCAAGCCCTCAACTCAGTGAGCTGCCT...CAACTTCCTGGTGAAAGACCAAGGGAATGCAAGTCCCCGATACATCCGATGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CAA 90 bp TGCATGAAGGGACACATGTATGCTTTGCAGCGGTTGCAGCGCAAAGGGCCAGATGGCTCTGTACCCCGGTaGTTCCTGTCATCTTCAATG +
Preference number: 3 (lower is better)
Translates to: CMKGHMYALQRLQRKGPDGSVPR*FLSSSM
Trigger: CATTGAAGATGACAGGAACAACCGGGGTACAGAGCC...ATCTGGCCCTTTGCGCTGCAACCGCTGCAAAGCATACATGTGTCCCTTCATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CAA 90 bp GCCCCACCCTCCCTAGGTAGAAAGTCTAACAGTGACTTGAGCTCCTCACAGAGGGGGACTTGCATTCCCTaGGTCTTTCACCAGGAAGTT +
Preference number: 3 (lower is better)
Translates to: APPSLGRKSNSDLSSSQRGTCIP*VFHQEV
Trigger: AACTTCCTGGTGAAAGACCAAGGGAATGCAAGTCCC...CCTCTGTGAGGAGCTCAAGTCACTGTTAGACTTTCTACCTAGGGAGGGTGGGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CAA 90 bp GCAGGGATGTATGGAATAGAAAGAGCTTCCCTGCACACTCAGCAGCCTTCAGAGACTGCCCGAGACTCATaGACGTTGACCAGGAAGCCA +
Preference number: 3 (lower is better)
Translates to: AGMYGIERASLHTQQPSETARDS*TLTRKP
Trigger: TGGCTTCCTGGTCAACGTCAATGAGTCTCGGGCAGT...CTCTGAAGGCTGCTGAGTGTGCAGGGAAGCTCTTTCTATTCCATACATCCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR TCA 72 bp AATGAGGGAACAGGGGCACCTTCCATCAGCAGGACATaGCAGAGTGGCAGGATACTTGAGCCCAGAAAGAAG +
Preference number: 3 (lower is better)
Translates to: NEGTGAPSISRT*QSGRILEPRKK
Trigger: CTTCTTTCTGGGCTCAAGTATCCTGCCACTCTGTCATGTCCTGCTGATGGAAGGTGCCCCTGTTCCCTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR CCA 72 bp TCTCTGACATCCTGGGGTGCTTTCTGGAAGCTAGCCTaGGCCCTATGCCATTTACCCACTTGCTTTAGCTCA +
Preference number: 3 (lower is better)
Translates to: SLTSWGAFWKLA*ALCHLPTCFSS
Trigger: TGAGCTAAAGCAAGTGGGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
3UTR-3UTR CAA 90 bp AGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATCCACGGAGTGATCATCAAAAGGGACACATAATATaGCCAGGGTCTGGGTGCCTC +
Preference number: 3 (lower is better)
Translates to: SSPVTSDSVPLYPRSDHQKGHII*PGSGCL
Trigger: GAGGCACCCAGACCCTGGCAATATTATGTGTCCCTT...TTGATGATCACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CAA 90 bp GTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATGTGAGGTATTGCAAGTaGATGACCAGGCTCCCTAGG +
Preference number: 3 (lower is better)
Translates to: VLGPLQLERKLVPLPDLNVRYCK*MTRLPR
Trigger: CCTAGGGAGCCTGGTCATCAACTTGCAATACCTCAC...ATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CAA 90 bp AGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATCCACGGAGTGATCATCAAAGAGTGGCAGGATACTaGAGCCCAGAAAGAAGGTGT +
Preference number: 3 (lower is better)
Translates to: SSPVTSDSVPLYPRSDHQRVAGY*SPERRC
Trigger: ACACCTTCTTTCTGGGCTCAAGTATCCTGCCACTCT...TTGATGATCACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CAA 90 bp CTAGCCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCAGCTATACCCCAGCTCTaGTGCACCTATATGTTTTAT +
Preference number: 3 (lower is better)
Translates to: LALVLPPSQLGLEDNCQPAIPQL*CTYMFY
Trigger: ATAAAACATATAGGTGCACAAGAGCTGGGGTATAGC...TGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGGCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CAA 90 bp AAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGAGTGATCATCAATCATaGCAGGAGAGAGCGAGCGAG +
Preference number: 3 (lower is better)
Translates to: KITVSHSVNTKAQAVSQQSDHQS*QERASE
Trigger: CTCGCTCGCTCTCTCCTGCAATGATTGATGATCACT...CTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CAA 90 bp GTATGGAATAGAAAGAGCTTCCCTGCACACTCAGCAGCCTTCAGAGCCTCCATTGAAGGAACCATTTTGTaGGGGCTGATAGCCTGGCTG +
Preference number: 3 (lower is better)
Translates to: VWNRKSFPAHSAAFRASIEGTIL*GLIAWL
Trigger: CAGCCAGGCTATCAGCCCCAACAAAATGGTTCCTTC...AATGGAGGCTCTGAAGGCTGCTGAGTGTGCAGGGAAGCTCTTTCTATTCCATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CAA 90 bp AGCCATCCAGCAGTGGCACAAACATGTCAGCCACATCAGACACAACCATCATCTTCCGAAGGAACCATTTaGTTGGGGCTGATAGCCTGG +
Preference number: 3 (lower is better)
Translates to: SHPAVAQTCQPHQTQPSSSEGTI*LGLIAW
Trigger: CCAGGCTATCAGCCCCAACAAAATGGTTCCTTCGGA...AGATGATGGTTGTGTCTGATGTGGCTGACATGTTTGTGCCACTGCTGGATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CAA 90 bp TGTCTGAGGCTGGAACAGAGTCTTCTCCTTGTCTGTATTGATCAGCTTCCTGTCCGAGACTCATTGACGTaGACCAGGAAGCCATCCAGC +
Preference number: 3 (lower is better)
Translates to: CLRLEQSLLLVCIDQLPVRDSLT*TRKPSS
Trigger: GCTGGATGGCTTCCTGGTCAACGTCAATGAGTCTCG...GACAGGAAGCTGATCAATACAGACAAGGAGAAGACTCTGTTCCAGCCTCAGACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CAA 90 bp CTATCAATGAGGCCTCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAGCTCCGCTCTCTTCATaGAGCCGATCGTCATGCTTG +
Preference number: 3 (lower is better)
Translates to: LSMRPRTFLDSGLSRTGRAPLSS*SRSSCL
Trigger: CAAGCATGACGATCGGCTCAATGAAGAGAGCGGAGC...TCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCCTCATTGATAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR TCA 72 bp GATCATCAATCATTGCAGGAGAGAGCGAGCGAGCAGTaGAAGCAGAGAAACTTGACTGCTAACCTCCAGGCC +
Preference number: 3 (lower is better)
Translates to: DHQSLQERASEQ*KQRNLTANLQA
Trigger: GGCCTGGAGGTTAGCAGTCAAGTTTCTCTGCTTTCACTGCTCGCTCGCTCTCTCCTGCAATGATTGATGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR TCA 72 bp GAAGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTaGACTGGCTCTGTGAGGTATTGCAAGTTGATGACC +
Preference number: 3 (lower is better)
Translates to: EAVFLVGAQSGM*TGSVRYCKLMT
Trigger: GGTCATCAACTTGCAATACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR TCA 72 bp TCCAGAACTGGCAGAACACTCAAACCACTGGTGATCTaGCTGAAGGAGGAGACGCTGAAAAGGCTCTGGACA +
Preference number: 3 (lower is better)
Translates to: SRTGRTLKPLVI*LKEETLKRLWT
Trigger: TGTCCAGAGCCTTTTCAGCGTCTCCTCCTTCAGTCAGATCACCAGTGGTTTGAGTGTTCTGCCAGTTCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR GCA 72 bp GTGTGCCTCTCTATCCACGGAGTGATCATCAATCATTaGAGGAGAGAGCGAGCGAGCAGTGAAAGCAGAGAA +
Preference number: 3 (lower is better)
Translates to: VCLSIHGVIINH*RRERASSESRE
Trigger: TTCTCTGCTTTCACTGCTCGCTCGCTCTCTCCTGCAATGATTGATGATCACTCCGTGGATAGAGAGGCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR CCA 72 bp CATCTCTGTTCTTCAGTTTCCCTGGGGCCTCTGCAATaGGCAGGGATGTATGGAATAGAAAGAGCTTCCCTG +
Preference number: 3 (lower is better)
Translates to: HLCSSVSLGPLQ*AGMYGIERASL
Trigger: CAGGGAAGCTCTTTCTATTCCATACATCCCTGCCCATTGCAGAGGCCCCAGGGAAACTGAAGAACAGAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR CCA 72 bp TGGGGCACAACAGAGAGTGTGGCCACATCCACATACTaGTTAGGGAAGAGAAAGAGATCTACACAGCAGCCT +
Preference number: 3 (lower is better)
Translates to: WGTTESVATSTY*LGKRKRSTQQP
Trigger: AGGCTGCTGTGTAGATCTCTTTCTCTTCCCTAACCAGTATGTGGATGTGGCCACACTCTCTGTTGTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CAA 90 bp AAGGATCAACTGTCCTGCAGAGGAGGGGCTAGCACAGTTCTTTCTGTAACAGGCAACAGCATCTCCATCTaGTCTTCCTGTTTCACCACG +
Preference number: 3 (lower is better)
Translates to: KDQLSCRGGASTVLSVTGNSISI*SSCFTT
Trigger: CGTGGTGAAACAGGAAGACAAGATGGAGATGCTGTT...GCCTGTTACAGAAAGAACTGTGCTAGCCCCTCCTCTGCAGGACAGTTGATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CAA 90 bp AGCCATCCAGCAGTGGCACAAACATGTCAGCCACATCAGACACAACCATCATCTTCCACCAGGAAGTGCTaGAACAGCATCTCCATCTTG +
Preference number: 3 (lower is better)
Translates to: SHPAVAQTCQPHQTQPSSSTRKC*NSISIL
Trigger: CAAGATGGAGATGCTGTTCAAGCACTTCCTGGTGGA...AGATGATGGTTGTGTCTGATGTGGCTGACATGTTTGTGCCACTGCTGGATGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR TCA 72 bp TCATGTACCGGGATCTCTGTGCCCGTAAGCTATCAATaGGGCCTCGAACCTTCTTGGACAGTGGATTATCCA +
Preference number: 3 (lower is better)
Translates to: SCTGISVPVSYQ*GLEPSWTVDYP
Trigger: TGGATAATCCACTGTCCAAGAAGGTTCGAGGCCTCATTGATAGCTTACGGGCACAGAGATCCCGGTACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
3UTR GCA 72 bp GGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTaGCTCCAAACCCCCAATACCGAATCATATACAGTG +
Preference number: 3 (lower is better)
Translates to: GPKGHIILPGSG*LQTPNTESYTV
Trigger: CACTGTATATGATTCGGTATTGGGGGTTTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR CCA 72 bp GACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTaGGTGCCTCCAAACCCCCAATACCGAATCATATAC +
Preference number: 3 (lower is better)
Translates to: DWSKGTHNIARV*VPPNPQYRIIY
Trigger: GTATATGATTCGGTATTGGGGGTTTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR CCA 72 bp AGACTCATTGACGTTGACCAGGAAGCCATCCAGCAGTaGCACAAACATGTCAGCCACATCAGACACAACCAT +
Preference number: 3 (lower is better)
Translates to: RLIDVDQEAIQQ*HKHVSHIRHNH
Trigger: ATGGTTGTGTCTGATGTGGCTGACATGTTTGTGCCACTGCTGGATGGCTTCCTGGTCAACGTCAATGAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR-3UTR CAA 90 bp TGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATAGAGTGGCAGGATACTaGAGCCCAGAAAGAAGGTGT +
Preference number: 3 (lower is better)
Translates to: WGLSSWKGSWYLYQILIYRVAGY*SPERRC
Trigger: ACACCTTCTTTCTGGGCTCAAGTATCCTGCCACTCT...ATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CAA 90 bp CTATCAATGAGGCCTCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAAAGTCTAACAGTGACTaGAGCTCCTCACAGAGGAGC +
Preference number: 3 (lower is better)
Translates to: LSMRPRTFLDSGLSRTGRKSNSD*SSSQRS
Trigger: GCTCCTCTGTGAGGAGCTCAAGTCACTGTTAGACTT...TCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCCTCATTGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR GCA 72 bp ATATGTTACTGTCCCAATTTCTCTGACATCCTGGGGTaGTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTT +
Preference number: 3 (lower is better)
Translates to: ICYCPNFSDILG*FLEASLGPMPF
Trigger: AAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGAGAAATTGGGACAGTAACATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000635550.1
3UTR GCA 72 bp TTTTGCAACTCAGTTCTCCGGTCACCTCTGACAGTGTaGCTCTCTATCCACGGAGTGATCATCAATCATTGC +
Preference number: 3 (lower is better)
Translates to: FCNSVLRSPLTV*LSIHGVIINHC
Trigger: GCAATGATTGATGATCACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACTGAGTTGCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR CCA 72 bp CCAAGAAGGACTGACCACTTTTCTCTCCACCACCTATaGGCTATACCCCAGCTCTTGTGCACCTATATGTTT +
Preference number: 3 (lower is better)
Translates to: PRRTDHFSLHHL*AIPQLLCTYMF
Trigger: AAACATATAGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAGTCCTTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CAA 90 bp TGCCATTTACCCACTTGCTTTAGCTCAGTAGCTGCCGAATCTCCTTGTGCATATAGAGTGGCAGGATACTaGAGCCCAGAAAGAAGGTGT +
Preference number: 3 (lower is better)
Translates to: CHLPTCFSSVAAESPCAYRVAGY*SPERRC
Trigger: ACACCTTCTTTCTGGGCTCAAGTATCCTGCCACTCT...ATATGCACAAGGAGATTCGGCAGCTACTGAGCTAAAGCAAGTGGGTAAATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465076.5
3UTR-3UTR CAA 90 bp AGAAACTTGACTGCTAACCTCCAGGCCCAAGAAGGACTGACCACTTTTCTCTCCGCTATACCCCAGCTCTaGTGCACCTATATGTTTTAT +
Preference number: 3 (lower is better)
Translates to: RNLTANLQAQEGLTTFLSAIPQL*CTYMFY
Trigger: ATAAAACATATAGGTGCACAAGAGCTGGGGTATAGC...GGAGAGAAAAGTGGTCAGTCCTTCTTGGGCCTGGAGGTTAGCAGTCAAGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR-3UTR CAA 90 bp GCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCTATACCCCAGCTCTaGTGCACCTATATGTTTTAT +
Preference number: 3 (lower is better)
Translates to: ASWGWKITVSHSVNTKAQAIPQL*CTYMFY
Trigger: ATAAAACATATAGGTGCACAAGAGCTGGGGTATAGC...TTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR GCA 72 bp AGGAAGCTGGTACCTCTACCAGATCTTAATATATTTTaGAACTCAGTTCTCCGGTCACCTCTGACAGTGTGC +
Preference number: 3 (lower is better)
Translates to: RKLVPLPDLNIF*NSVLRSPLTVC
Trigger: GCACACTGTCAGAGGTGACCGGAGAACTGAGTTGCAAAATATATTAAGATCTGGTAGAGGTACCAGCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR CCA 72 bp GCCTCGAACCTTCTTGGACAGTGGATTATCCAGAACTaGCAGAACACTCTAGAACACAAAATTCATTTATCC +
Preference number: 3 (lower is better)
Translates to: ASNLLGQWIIQN*QNTLEHKIHLS
Trigger: GGATAAATGAATTTTGTGTTCTAGAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465076.5
3UTR TCA 72 bp CTCCAAACCCCCAATACCGAATCATATACAGTGAACTaGGAAGCTACATTCATTATGACAGGATTAGCAGGA +
Preference number: 3 (lower is better)
Translates to: LQTPNTESYTVN*EATFIMTGLAG
Trigger: TCCTGCTAATCCTGTCATAATGAATGTAGCTTCTCAGTTCACTGTATATGATTCGGTATTGGGGGTTTGGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp AAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCTCTGCCTAGGAGCCTGTGCTGTTaGGGCTGGAGGTGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: KAQAVSQQERTALQLPLPRSLCC*GWRCPR
Trigger: TCGGGGGCACCTCCAGCCTCAACAGCACAGGCTCCT...AGGCAGAGGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp AAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCTCTGCCTCAGCCGAGGACCCCCTaGAGCTGGGGGTGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: KAQAVSQQERTALQLPLPQPRTP*SWGCEA
Trigger: AGCTTCACACCCCCAGCTTCAGGGGGTCCTCGGCTG...AGGCAGAGGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp AAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCTCTGCCTGTTGGGCTGGCTCACTaGGGGCCCTCCAAAACTCTG +
Preference number: 4 (lower is better)
Translates to: KAQAVSQQERTALQLPLPVGLAH*GPSKTL
Trigger: CAGAGTTTTGGAGGGCCCTCAGTGAGCCAGCCCAAC...AGGCAGAGGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTCTGCCTCTCTCCCCAACAACCCCGGGCCTGGAGAAGCAGTGTTTCTCGTGGGAGGCTCCATAGGGAATaGCGGGGGCTGTGGACCCTG +
Preference number: 4 (lower is better)
Translates to: LCLSPQQPRAWRSSVSRGRLHRE*RGLWTL
Trigger: CAGGGTCCACAGCCCCCGCCATTCCCTATGGAGCCT...CCCACGAGAAACACTGCTTCTCCAGGCCCGGGGTTGTTGGGGAGAGAGGCAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCAGCCGAGGACCCCCTaGAGCTGGGGGTGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: PLSQYQSPSGVPAGENGAQPRTP*SWGCEA
Trigger: AGCTTCACACCCCCAGCTTCAGGGGGTCCTCGGCTG...AGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp AAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCTCTGCCTGCCAAACTGGCCATATaGAGCCTGGCCACAAGGAGC +
Preference number: 4 (lower is better)
Translates to: KAQAVSQQERTALQLPLPAKLAI*SLATRS
Trigger: GCTCCTTGTGGCCAGGCTGCATATGGCCAGTTTGGC...AGGCAGAGGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCCAGCGGTTTGATGACTaGTGCCAGGGGCACCTGAGC +
Preference number: 4 (lower is better)
Translates to: QYQSPSGVPAGENGAPAAQRFDD*CQGHLS
Trigger: GCTCAGGTGCCCCTGGCAGCAGTCATCAAACCGCTG...GGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCCTCTGGGGGCAGCCTTaGCAGCGGTTTGATGACTGC +
Preference number: 4 (lower is better)
Translates to: QYQSPSGVPAGENGAPAALWGQP*QRFDDC
Trigger: GCAGTCATCAAACCGCTGGCAAGGCTGCCCCCAGAG...GGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTCTGCCTCTCTCCCCAACAACCCCGGGCCTGGAGAAGCAGTGTTTCTCGTGGGGAATGGCGGGGGCTGTaGACCCTGATTGCCCACCAT +
Preference number: 4 (lower is better)
Translates to: LCLSPQQPRAWRSSVSRGEWRGL*TLIAHH
Trigger: ATGGTGGGCAATCAGGGTCCACAGCCCCCGCCATTC...CCCACGAGAAACACTGCTTCTCCAGGCCCGGGGTTGTTGGGGAGAGAGGCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCTCTGCCTGGGCCACACACTCTTTaGCCAGGGTCTGATAGGCAC +
Preference number: 4 (lower is better)
Translates to: KAQAVSQQERTALQLPLPGPHTL*PGSDRH
Trigger: GTGCCTATCAGACCCTGGCCAAAGAGTGTGTGGCCC...AGGCAGAGGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCTCTGCCTGAGCCACCAGTGAGCTaGGGCACAACAGAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: KAQAVSQQERTALQLPLPEPPVS*GTTESV
Trigger: CACACTCTCTGTTGTGCCCCAGCTCACTGGTGGCTC...AGGCAGAGGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CTCCCTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTCTGCGTAGCCACCTGTaGACTTGTCGGGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: LPTEPSSVGASPAGKEAGLRSHL*TCRGRA
Trigger: GGCCCTCCCCCGACAAGTGCACAGGTGGCTACGCAG...ACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp GAGGAGGTGAAGACACATGGTTGGGCTGGCTCACTGAGGGCCCTCCAAAACTCTGGCTGCTGCGGGGAGTaGATAGGTGGCAGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: EEVKTHGWAGSLRALQNSGCCGE*IGGSGP
Trigger: GGGACCACTGCCACCTATGCACTCCCCGCAGCAGCC...AGAGTTTTGGAGGGCCCTCAGTGAGCCAGCCCAACCATGTGTCTTCACCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp CCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAAGGGGCCCAGTCATCTaGGTGCCAGGGGGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: PLSCPQASWGWKITVSHSRGPVI*VPGGRA
Trigger: AGCTCTGCCCCCTGGCACCCAGATGACTGGGCCCCT...TGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTGCTGACTGCCAAAGGTaGGTGCTGCTGGGTAGGGGC +
Preference number: 4 (lower is better)
Translates to: PLSQYQSPSGVPAGENGAADCQR*VLLGRG
Trigger: GCCCCTACCCAGCAGCACCCACCTTTGGCAGTCAGC...AGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCGGGCCACACACTCTTTaGCCAGGGTCTGATAGGCAC +
Preference number: 4 (lower is better)
Translates to: QYQSPSGVPAGENGAPAAGPHTL*PGSDRH
Trigger: GTGCCTATCAGACCCTGGCCAAAGAGTGTGTGGCCC...GGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTCTGCCTCTCTCCCCAACAACCCCGGGCCTGGAGAAGCAGTGTTTCTCGTGGGTTCAGGGCCAGATTATaGATGCGGAGCCGACGCTGC +
Preference number: 4 (lower is better)
Translates to: LCLSPQQPRAWRSSVSRGFRARL*MRSRRC
Trigger: GCAGCGTCGGCTCCGCATCCATAATCTGGCCCTGAA...CCCACGAGAAACACTGCTTCTCCAGGCCCGGGGTTGTTGGGGAGAGAGGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CTCCCTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTGGGGACCCAAATGGCTaGGACCCAGGCAGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: LPTEPSSVGASPAGKEAGGDPNG*DPGSLC
Trigger: GCAAAGGCTGCCTGGGTCTCAGCCATTTGGGTCCCC...ACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp GGTAGAATGAGGGAACAGGGGCACCTTCCATCAGCAGGACATGACAGAGTGGCAGAAGCTGGAGGCCTGTaGTGGGGCAGATCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GRMREQGHLPSAGHDRVAEAGGL*WGRSLG
Trigger: CCCCAGCGATCTGCCCCATCACAGGCCTCCAGCTTC...TGCCACTCTGTCATGTCCTGCTGATGGAAGGTGCCCCTGTTCCCTCATTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp TCTGACATCCTGGGGTGCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCGAAGCTGGAGGCCTGTaGTGGGGCAGATCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SDILGCFLEASLGPMPFTEAGGL*WGRSLG
Trigger: CCCCAGCGATCTGCCCCATCACAGGCCTCCAGCTTC...GGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000635550.1
CDS-3UTR TCA 90 bp GAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCGCTGCCAGGGGCACCTaGGCCTGCTTAGCCATGTCA +
Preference number: 4 (lower is better)
Translates to: EPSSVGASPAGKEAGTSTAARGT*ACLAMS
Trigger: TGACATGGCTAAGCAGGCTCAGGTGCCCCTGGCAGC...GGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp GAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCGCCCAGTCATCTGGGTaGCAGGGGGCAGAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: EPSSVGASPAGKEAGTSTAQSSG*QGAELE
Trigger: CTCAAGCTCTGCCCCCTGGCACCCAGATGACTGGGC...GGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp AACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGGGCTGCTGCGGGGAGTaGATAGGTGGCAGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: NCQPLSQYQSPSGVPAGEGCCGE*IGGSGP
Trigger: GGGACCACTGCCACCTATGCACTCCCCGCAGCAGCC...CTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CTAGCCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCAGGGCCAGATTATGGATaGGGAGCCGACGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: LALVLPPSQLGLEDNCQPGPDYG*GADAAL
Trigger: CAGGGCAGCGTCGGCTCCGCATCCATAATCTGGCCC...TGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGGCTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp AAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCTCTGCCTAAGGATCAACTGTCCTaGAGAGGAGGGGCTAGCACA +
Preference number: 4 (lower is better)
Translates to: KAQAVSQQERTALQLPLPKDQLS*RGGAST
Trigger: TGTGCTAGCCCCTCCTCTGCAGGACAGTTGATCCTT...AGGCAGAGGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp AAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCTCTGCCTTCTGACATCCTGGGGTaGTTTCTGGAAGCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: KAQAVSQQERTALQLPLPSDILG*FLEASL
Trigger: CAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA...AGGCAGAGGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTCTGCCTCTCTCCCCAACAACCCCGGGCCTGGAGAAGCAGTGTTTCTCGTGGGTCTCCTTGGCCAAACTaGCCATATGCAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: LCLSPQQPRAWRSSVSRGSPWPN*PYAAWP
Trigger: TGGCCAGGCTGCATATGGCCAGTTTGGCCAAGGAGA...CCCACGAGAAACACTGCTTCTCCAGGCCCGGGGTTGTTGGGGAGAGAGGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp GGTAGAATGAGGGAACAGGGGCACCTTCCATCAGCAGGACATGACAGAGTGGCAGGGCTGAAGCACAGGTaGCTGGTTGCCCACAGGGGC +
Preference number: 4 (lower is better)
Translates to: GRMREQGHLPSAGHDRVAGLKHR*LVAHRG
Trigger: GCCCCTGTGGGCAACCAGCCACCTGTGCTTCAGCCC...TGCCACTCTGTCATGTCCTGCTGATGGAAGGTGCCCCTGTTCCCTCATTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TCTGACATCCTGGGGTGCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCGGGCTGAAGCACAGGTaGCTGGTTGCCCACAGGGGC +
Preference number: 4 (lower is better)
Translates to: SDILGCFLEASLGPMPFTGLKHR*LVAHRG
Trigger: GCCCCTGTGGGCAACCAGCCACCTGTGCTTCAGCCC...GGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CCA 90 bp CAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCGGAGGTGAAGACACATaGTTGGGCTGGCTCACTGAG +
Preference number: 4 (lower is better)
Translates to: QYQSPSGVPAGENGAPAAGGEDT*LGWLTE
Trigger: CTCAGTGAGCCAGCCCAACCATGTGTCTTCACCTCC...GGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAGGGGCCCAGTCATCTaGGTGCCAGGGGGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: NCQPLSQYQSPSGVPAGERGPVI*VPGGRA
Trigger: AGCTCTGCCCCCTGGCACCCAGATGACTGGGCCCCT...CTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAGCTGACTGCCAAAGGTaGGTGCTGCTGGGTAGGGGC +
Preference number: 4 (lower is better)
Translates to: PLSCPQASWGWKITVSHSADCQR*VLLGRG
Trigger: GCCCCTACCCAGCAGCACCCACCTTTGGCAGTCAGC...TGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR CAA 72 bp CCAGGCTCCCTAGGCTCCCTACAGAACCATCCAGTGTaGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCT +
Preference number: 4 (lower is better)
Translates to: PGSLGSLQNHPV*GPLQLERKLVP
Trigger: AGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAGGGAGCCTAGGGAGCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp TACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCGGGGGCTGTGGACCCTaGTTGCCCACCATAGCTGGA +
Preference number: 4 (lower is better)
Translates to: YRTIQCWGLSSWKGSWYLGGCGP*LPTIAG
Trigger: TCCAGCTATGGTGGGCAATCAGGGTCCACAGCCCCC...GAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp TCTGACATCCTGGGGTGCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCGGGGGCTGTGGACCCTaGTTGCCCACCATAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SDILGCFLEASLGPMPFTGGCGP*LPTIAG
Trigger: TCCAGCTATGGTGGGCAATCAGGGTCCACAGCCCCC...GGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000635550.1
CDS-3UTR TCA 90 bp GCCCCACCCTCCCTAGGTAGAAAGTCTAACAGTGACTTGAGCTCCTCACAGAGGGGGGGCTGTGGACCCTaGTTGCCCACCATAGCTGGA +
Preference number: 4 (lower is better)
Translates to: APPSLGRKSNSDLSSSQRGGCGP*LPTIAG
Trigger: TCCAGCTATGGTGGGCAATCAGGGTCCACAGCCCCC...CCTCTGTGAGGAGCTCAAGTCACTGTTAGACTTTCTACCTAGGGAGGGTGGGGC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR TCA 90 bp TCTGACATCCTGGGGTGCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCGGGGACCCAAATGGCTaGGACCCAGGCAGCCTTTGC +
Preference number: 4 (lower is better)
Translates to: SDILGCFLEASLGPMPFTGDPNG*DPGSLC
Trigger: GCAAAGGCTGCCTGGGTCTCAGCCATTTGGGTCCCC...GGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp AGAAGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGAAGCTGGAGGCCTGTaGTGGGGCAGATCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RSSVSRGSSEWDVNWLCEEAGGL*WGRSLG
Trigger: CCCCAGCGATCTGCCCCATCACAGGCCTCCAGCTTC...CTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp GGTAGAATGAGGGAACAGGGGCACCTTCCATCAGCAGGACATGACAGAGTGGCAGCCAACGCGGATTGCTaGCTCTTCTGCCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: GRMREQGHLPSAGHDRVAANADC*LFCPTL
Trigger: GAGGGTGGGGCAGAAGAGTCAGCAATCCGCGTTGGC...TGCCACTCTGTCATGTCCTGCTGATGGAAGGTGCCCCTGTTCCCTCATTCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp AAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCTCTGCCTGCACCTTATTGTAGGTaGCAAAGCCAACGCGGATTG +
Preference number: 4 (lower is better)
Translates to: KAQAVSQQERTALQLPLPAPYCR*QSQRGL
Trigger: CAATCCGCGTTGGCTTTGTCACCTACAATAAGGTGC...AGGCAGAGGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CTCTGCCTCTCTCCCCAACAACCCCGGGCCTGGAGAAGCAGTGTTTCTCGTGGGTGCATTCCAGACAGCTaGGTAGCCACCTGTGCACTT +
Preference number: 4 (lower is better)
Translates to: LCLSPQQPRAWRSSVSRGCIPDS*VATCAL
Trigger: AAGTGCACAGGTGGCTACGCAGCTGTCTGGAATGCA...CCCACGAGAAACACTGCTTCTCCAGGCCCGGGGTTGTTGGGGAGAGAGGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTGGCTGCTGCGGGGAGTaGATAGGTGGCAGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: LTTFLSTTYGLYPSSCAPGCCGE*IGGSGP
Trigger: GGGACCACTGCCACCTATGCACTCCCCGCAGCAGCC...AGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp GAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCCGGTTTGATGACTGCTaGCAGGGGCACCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: EPSSVGASPAGKEAGTSTRFDDC*QGHLSL
Trigger: CAGGCTCAGGTGCCCCTGGCAGCAGTCATCAAACCG...GGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp AAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCTCTGCCTGACACATGTATGCTTTaGAGCGGTTGCAGCGCAAAG +
Preference number: 4 (lower is better)
Translates to: KAQAVSQQERTALQLPLPDTCML*SGCSAK
Trigger: CTTTGCGCTGCAACCGCTGCAAAGCATACATGTGTC...AGGCAGAGGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp AAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCTCTGCCTGGCTCTGTGAGGTATTaGAAGTTGATGACCAGGCTC +
Preference number: 4 (lower is better)
Translates to: KAQAVSQQERTALQLPLPGSVRY*KLMTRL
Trigger: GAGCCTGGTCATCAACTTGCAATACCTCACAGAGCC...AGGCAGAGGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp TCTGACATCCTGGGGTGCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCGAACGGCGCTCCAGCTaGCTCTGCCTCTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: SDILGCFLEASLGPMPFTERRSS*LCLSPQ
Trigger: TTGGGGAGAGAGGCAGAGGCAGCTGGAGCGCCGTTC...GGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp GGTAGAATGAGGGAACAGGGGCACCTTCCATCAGCAGGACATGACAGAGTGGCAGAACGGCGCTCCAGCTaGCTCTGCCTCTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: GRMREQGHLPSAGHDRVAERRSS*LCLSPQ
Trigger: TTGGGGAGAGAGGCAGAGGCAGCTGGAGCGCCGTTC...TGCCACTCTGTCATGTCCTGCTGATGGAAGGTGCCCCTGTTCCCTCATTCTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTAGCCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCAGAATGGCGGGGGCTGTaGACCCTGATTGCCCACCAT +
Preference number: 4 (lower is better)
Translates to: LALVLPPSQLGLEDNCQPEWRGL*TLIAHH
Trigger: ATGGTGGGCAATCAGGGTCCACAGCCCCCGCCATTC...TGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAGGCTCCATAGGGAATaGCGGGGGCTGTGGACCCTG +
Preference number: 4 (lower is better)
Translates to: NCQPLSQYQSPSGVPAGERLHRE*RGLWTL
Trigger: CAGGGTCCACAGCCCCCGCCATTCCCTATGGAGCCT...CTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TTCCCTGGGGCCTCTGCAATGGGCAGGGATGTATGGAATAGAAAGAGCTTCCCTGGGCTGAAGCACAGGTaGCTGGTTGCCCACAGGGGC +
Preference number: 4 (lower is better)
Translates to: FPGASAMGRDVWNRKSFPGLKHR*LVAHRG
Trigger: GCCCCTGTGGGCAACCAGCCACCTGTGCTTCAGCCC...AGGGAAGCTCTTTCTATTCCATACATCCCTGCCCATTGCAGAGGCCCCAGGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp CTAGCCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCAGACACATGGTTGGGCTaGCTCACTGAGGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LALVLPPSQLGLEDNCQPDTWLG*LTEGPP
Trigger: TGGAGGGCCCTCAGTGAGCCAGCCCAACCATGTGTC...TGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TCCTGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGAGGGGCCCAGTCATCTaGGTGCCAGGGGGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: SCLPLSSWETGPKGHIILRGPVI*VPGGRA
Trigger: AGCTCTGCCCCCTGGCACCCAGATGACTGGGCCCCT...CAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTAGCCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCAGTGCATAGGTGGCAGTaGTCCCAGGGGCCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: LALVLPPSQLGLEDNCQPVHRWQ*SQGPSH
Trigger: ATGACTGGGCCCCTGGGACCACTGCCACCTATGCAC...TGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGGCTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTCCCTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTCTGAGGGCCCCGGGCTaGTCCGAAGGAACCATTTTG +
Preference number: 4 (lower is better)
Translates to: LPTEPSSVGASPAGKEAGLRAPG*SEGTIL
Trigger: CAAAATGGTTCCTTCGGACCAGCCCGGGGCCCTCAG...ACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCGAAGCCATCCAGCAGTaGCACAAACATGTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: QYQSPSGVPAGENGAPAAEAIQQ*HKHVSH
Trigger: GTGGCTGACATGTTTGTGCCACTGCTGGATGGCTTC...GGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCTCTGCCTGCACAACAGAGAGTGTaGCCACATCCACATACTGGT +
Preference number: 4 (lower is better)
Translates to: KAQAVSQQERTALQLPLPAQQRV*PHPHTG
Trigger: ACCAGTATGTGGATGTGGCCACACTCTCTGTTGTGC...AGGCAGAGGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTCTGCCTCTCTCCCCAACAACCCCGGGCCTGGAGAAGCAGTGTTTCTCGTGGGAGAGGCTCGAACTGCTaGTGGTTCGGTAGTACTCTC +
Preference number: 4 (lower is better)
Translates to: LCLSPQQPRAWRSSVSRGRGSNC*WFGSTL
Trigger: GAGAGTACTACCGAACCACCAGCAGTTCGAGCCTCT...CCCACGAGAAACACTGCTTCTCCAGGCCCGGGGTTGTTGGGGAGAGAGGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCACGCTGAAAAGGCTCTaGACAACACCCTGTTGGACG +
Preference number: 4 (lower is better)
Translates to: QYQSPSGVPAGENGAPAATLKRL*TTPCWT
Trigger: CGTCCAACAGGGTGTTGTCCAGAGCCTTTTCAGCGT...GGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCGGGAGCAGGCAAGCCTaGCCACCATCAAGCCTAGCC +
Preference number: 4 (lower is better)
Translates to: YRTIQCWGLSSWKGSWYLGSRQA*PPSSLA
Trigger: GGCTAGGCTTGATGGTGGCCAGGCTTGCCTGCTCCC...GAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp GTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATAGGAGCCTGTGCTGTTaGGGCTGGAGGTGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: VLGPLQLERKLVPLPDLNRSLCC*GWRCPR
Trigger: TCGGGGGCACCTCCAGCCTCAACAGCACAGGCTCCT...ATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp GAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCGGCAGCCTTTGCATCTaGACAGTGGAGCTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: EPSSVGASPAGKEAGTSTGSLCI*TVELGP
Trigger: TGGGCCAAGCTCCACTGTTCAGATGCAAAGGCTGCC...GGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTGTCTGGATCCCAGGATaGCCTTGGGCCTGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: LQNHPVLGPLQLERKLVPVWIPG*PWAWLR
Trigger: CCTTAGCCAGGCCCAAGGTCATCCTGGGATCCAGAC...AGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp TCAAAGCCAACAACCTTCTGGACATCACGACGCAGGTCACTCAGGAACCGCTCCGTCTGGATCCCAGGATaGCCTTGGGCCTGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: SKPTTFWTSRRRSLRNRSVWIPG*PWAWLR
Trigger: CCTTAGCCAGGCCCAAGGTCATCCTGGGATCCAGAC...GGAGCGGTTCCTGAGTGACCTGCGTCGTGATGTCCAGAAGGTTGTTGGCTTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR TCA 90 bp AGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTATTGGAAGCTGGAGGCCTGTaGTGGGGCAGATCGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SVSRGSSEWDVNWLCEVLEAGGL*WGRSLG
Trigger: CCCCAGCGATCTGCCCCATCACAGGCCTCCAGCTTC...CAATACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGGCTGCCAGGGGCACCTaGGCCTGCTTAGCCATGTCA +
Preference number: 4 (lower is better)
Translates to: LLLGDWSKGTHNIARVWVAARGT*ACLAMS
Trigger: TGACATGGCTAAGCAGGCTCAGGTGCCCCTGGCAGC...CACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTGCCAACGCGGATTGCTaGCTCTTCTGCCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: LTTFLSTTYGLYPSSCAPANADC*LFCPTL
Trigger: GAGGGTGGGGCAGAAGAGTCAGCAATCCGCGTTGGC...AGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CTCTGCCTCTCTCCCCAACAACCCCGGGCCTGGAGAAGCAGTGTTTCTCGTGGGCTGTCCCAATTTCTCTaGCATCCTGGGGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LCLSPQQPRAWRSSVSRGLSQFL*HPGVLS
Trigger: AGAAAGCACCCCAGGATGTCAGAGAAATTGGGACAG...CCCACGAGAAACACTGCTTCTCCAGGCCCGGGGTTGTTGGGGAGAGAGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp GAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCGCCAAACTGGCCATATaGAGCCTGGCCACAAGGAGC +
Preference number: 4 (lower is better)
Translates to: EPSSVGASPAGKEAGTSTAKLAI*SLATRS
Trigger: GCTCCTTGTGGCCAGGCTGCATATGGCCAGTTTGGC...GGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp GTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATCTGCGTAGCCACCTGTaGACTTGTCGGGGGAGGGCC +
Preference number: 4 (lower is better)
Translates to: VLGPLQLERKLVPLPDLNLRSHL*TCRGRA
Trigger: GGCCCTCCCCCGACAAGTGCACAGGTGGCTACGCAG...ATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp AACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGGCCAAAGGTGGGTGCTaGTGGGTAGGGGCCTCCATA +
Preference number: 4 (lower is better)
Translates to: NCQPLSQYQSPSGVPAGEAKGGC*WVGASI
Trigger: TATGGAGGCCCCTACCCAGCAGCACCCACCTTTGGC...CTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp GCCCCACCCTCCCTAGGTAGAAAGTCTAACAGTGACTTGAGCTCCTCACAGAGGGCCAAAGGTGGGTGCTaGTGGGTAGGGGCCTCCATA +
Preference number: 4 (lower is better)
Translates to: APPSLGRKSNSDLSSSQRAKGGC*WVGASI
Trigger: TATGGAGGCCCCTACCCAGCAGCACCCACCTTTGGC...CCTCTGTGAGGAGCTCAAGTCACTGTTAGACTTTCTACCTAGGGAGGGTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp TCCTGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGACTGCCAAAGGTGGGTaGTGCTGGGTAGGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SCLPLSSWETGPKGHIILTAKGG*CWVGAS
Trigger: GGAGGCCCCTACCCAGCAGCACCCACCTTTGGCAGT...CAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp TGGCCCCGTACTCCAGTAACAAATGGCTCTGTACCCCGGTTGTTCCTGTCATCTACTGCCAAAGGTGGGTaGTGCTGGGTAGGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WPRTPVTNGSVPRLFLSSTAKGG*CWVGAS
Trigger: GGAGGCCCCTACCCAGCAGCACCCACCTTTGGCAGT...AGATGACAGGAACAACCGGGGTACAGAGCCATTTGTTACTGGAGTACGGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp AAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCTCTGCCTGATGTATCGGGGACTTaGATTCCCTTGGTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: KAQAVSQQERTALQLPLPDVSGT*IPLVFH
Trigger: GTGAAAGACCAAGGGAATGCAAGTCCCCGATACATC...AGGCAGAGGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp GGTAGAATGAGGGAACAGGGGCACCTTCCATCAGCAGGACATGACAGAGTGGCACGGTTTGATGACTGCTaGCAGGGGCACCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GRMREQGHLPSAGHDRVARFDDC*QGHLSL
Trigger: CAGGCTCAGGTGCCCCTGGCAGCAGTCATCAAACCG...TGCCACTCTGTCATGTCCTGCTGATGGAAGGTGCCCCTGTTCCCTCATTCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp TACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCCAGCGGTTTGATGACTaGTGCCAGGGGCACCTGAGC +
Preference number: 4 (lower is better)
Translates to: YRTIQCWGLSSWKGSWYLQRFDD*CQGHLS
Trigger: GCTCAGGTGCCCCTGGCAGCAGTCATCAAACCGCTG...GAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp GGTGATGAGCGTGTCACGAACAGCCTTCACAGGGCTATTCAGGACTCCCCGATACTCTGGGGGCAGCCTTaGCAGCGGTTTGATGACTGC +
Preference number: 4 (lower is better)
Translates to: GDERVTNSLHRAIQDSPILWGQP*QRFDDC
Trigger: GCAGTCATCAAACCGCTGGCAAGGCTGCCCCCAGAG...TATCGGGGAGTCCTGAATAGCCCTGTGAAGGCTGTTCGTGACACGCTCATCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp CTCTGCCTCTCTCCCCAACAACCCCGGGCCTGGAGAAGCAGTGTTTCTCGTGGGAAGCATCCACACGTTTaGCGGTATGATCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LCLSPQQPRAWRSSVSRGKHPHV*RYDPGA
Trigger: AGCACCTGGATCATACCGGCAAACGTGTGGATGCTT...CCCACGAGAAACACTGCTTCTCCAGGCCCGGGGTTGTTGGGGAGAGAGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCACAGCACGGATACCAGTaGTTGTCCGGACCCGCATCA +
Preference number: 4 (lower is better)
Translates to: PLSCPQASWGWKITVSHSQHGYQ*LSGPAS
Trigger: TGATGCGGGTCCGGACAAGCACTGGTATCCGTGCTG...TGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTGAGCCGACGCTGCCCTaGACAGCTGGTGTAAAGCAG +
Preference number: 4 (lower is better)
Translates to: LQNHPVLGPLQLERKLVPEPTLP*TAGVKQ
Trigger: CTGCTTTACACCAGCTGTGCAGGGCAGCGTCGGCTC...AGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp GAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCACCCTGTTGGACGCTTaGTCCCACCCAGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: EPSSVGASPAGKEAGTSTTLLDA*SHPEEE
Trigger: CTCTTCCTCTGGGTGGGAGCAAGCGTCCAACAGGGT...GGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCGTGATCATCAATCATTaGAGGAGAGAGCGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: QYQSPSGVPAGENGAPAAVIINH*RRERAS
Trigger: GCTCGCTCGCTCTCTCCTGCAATGATTGATGATCAC...GGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTAAGGCTCCATAGGGAATaGCGGGGGCTGTGGACCCTG +
Preference number: 4 (lower is better)
Translates to: SSVSRGSSEWDVNWLCEVRLHRE*RGLWTL
Trigger: CAGGGTCCACAGCCCCCGCCATTCCCTATGGAGCCT...TACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TGCATGAAGGGACACATGTATGCTTTGCAGCGGTTGCAGCGCAAAGGGCCAGATAGGCTCCATAGGGAATaGCGGGGGCTGTGGACCCTG +
Preference number: 4 (lower is better)
Translates to: CMKGHMYALQRLQRKGPDRLHRE*RGLWTL
Trigger: CAGGGTCCACAGCCCCCGCCATTCCCTATGGAGCCT...ATCTGGCCCTTTGCGCTGCAACCGCTGCAAAGCATACATGTGTCCCTTCATGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp CTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTGCCCACAGGGGCCAATaGGGACCCAAATGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LQNHPVLGPLQLERKLVPAHRGQ*GPKWLR
Trigger: TCTCAGCCATTTGGGTCCCCATTGGCCCCTGTGGGC...AGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TCTGACATCCTGGGGTGCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCGACACATGGTTGGGCTaGCTCACTGAGGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: SDILGCFLEASLGPMPFTDTWLG*LTEGPP
Trigger: TGGAGGGCCCTCAGTGAGCCAGCCCAACCATGTGTC...GGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CCA 90 bp TCTGACATCCTGGGGTGCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCTTGGGGCTGATAGCCTaGCTGCTGCGGGGAGTGCAT +
Preference number: 4 (lower is better)
Translates to: SDILGCFLEASLGPMPFTLGLIA*LLRGVH
Trigger: ATGCACTCCCCGCAGCAGCCAGGCTATCAGCCCCAA...GGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CCA 90 bp AACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGTTGGGGCTGATAGCCTaGCTGCTGCGGGGAGTGCAT +
Preference number: 4 (lower is better)
Translates to: NCQPLSQYQSPSGVPAGELGLIA*LLRGVH
Trigger: ATGCACTCCCCGCAGCAGCCAGGCTATCAGCCCCAA...CTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTGTTCTTCAGTTTCCCTaGGGCCTCTGCAATGGGCAG +
Preference number: 4 (lower is better)
Translates to: PLSQYQSPSGVPAGENGAVLQFP*GLCNGQ
Trigger: CTGCCCATTGCAGAGGCCCCAGGGAAACTGAAGAAC...AGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAGAGCCACCAGTGAGCTaGGGCACAACAGAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: PLSCPQASWGWKITVSHSEPPVS*GTTESV
Trigger: CACACTCTCTGTTGTGCCCCAGCTCACTGGTGGCTC...TGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTAGCCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCAGAGCCACCAGTGAGCTaGGGCACAACAGAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: LALVLPPSQLGLEDNCQPEPPVS*GTTESV
Trigger: CACACTCTCTGTTGTGCCCCAGCTCACTGGTGGCTC...TGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCAAGCCAACAACCTTCTaGACATCACGACGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: QYQSPSGVPAGENGAPAAKPTTF*TSRRRS
Trigger: TGACCTGCGTCGTGATGTCCAGAAGGTTGTTGGCTT...GGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCGTGGGAGCTCAGAGTaGGATGTGAACTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PLSQYQSPSGVPAGENGARGSSE*DVNWLC
Trigger: ACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACG...AGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTCTGCCTCTCTCCCCAACAACCCCGGGCCTGGAGAAGCAGTGTTTCTCGTGGGAAGCAGTGTTTCTCGTaGGAGCTCAGAGTGGGATGT +
Preference number: 4 (lower is better)
Translates to: LCLSPQQPRAWRSSVSRGKQCFS*ELRVGC
Trigger: ACATCCCACTCTGAGCTCCCACGAGAAACACTGCTT...CCCACGAGAAACACTGCTTCTCCAGGCCCGGGGTTGTTGGGGAGAGAGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTGGGAGCAGGCAAGCCTaGCCACCATCAAGCCTAGCC +
Preference number: 4 (lower is better)
Translates to: LTTFLSTTYGLYPSSCAPGSRQA*PPSSLA
Trigger: GGCTAGGCTTGATGGTGGCCAGGCTTGCCTGCTCCC...AGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCTCCAAGGGAGCAGGCAAGCCTaGCCACCATCAAGCCTAGCC +
Preference number: 4 (lower is better)
Translates to: WETGPKGHIILPGSGCLQGSRQA*PPSSLA
Trigger: GGCTAGGCTTGATGGTGGCCAGGCTTGCCTGCTCCC...TTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp AGAAACTTGACTGCTAACCTCCAGGCCCAAGAAGGACTGACCACTTTTCTCTCCCAGCCGAGGACCCCCTaGAGCTGGGGGTGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: RNLTANLQAQEGLTTFLSQPRTP*SWGCEA
Trigger: AGCTTCACACCCCCAGCTTCAGGGGGTCCTCGGCTG...GGAGAGAAAAGTGGTCAGTCCTTCTTGGGCCTGGAGGTTAGCAGTCAAGTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp GTATGGAATAGAAAGAGCTTCCCTGCACACTCAGCAGCCTTCAGAGCCTCCATTCAGCCGAGGACCCCCTaGAGCTGGGGGTGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: VWNRKSFPAHSAAFRASIQPRTP*SWGCEA
Trigger: AGCTTCACACCCCCAGCTTCAGGGGGTCCTCGGCTG...AATGGAGGCTCTGAAGGCTGCTGAGTGTGCAGGGAAGCTCTTTCTATTCCATAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR TCA 90 bp CTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGGTTGGGCTGGCTCACTaGGGGCCCTCCAAAACTCTG +
Preference number: 4 (lower is better)
Translates to: LLLGDWSKGTHNIARVWVVGLAH*GPSKTL
Trigger: CAGAGTTTTGGAGGGCCCTCAGTGAGCCAGCCCAAC...CACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp GAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCCAGAGCTTGAGGAGGTaGAGACACATGGTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: EPSSVGASPAGKEAGTSTQSLRR*RHMVGL
Trigger: CAGCCCAACCATGTGTCTTCACCTCCTCAAGCTCTG...GGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCAGGGGGCAGAGCTTaGGGAGGTGAAGACACATGG +
Preference number: 4 (lower is better)
Translates to: LLLGDWSKGTHNIARVWVPGGRA*GGEDTW
Trigger: CCATGTGTCTTCACCTCCTCAAGCTCTGCCCCCTGG...CACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp GTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATGCTGCCAGGGGCACCTaGGCCTGCTTAGCCATGTCA +
Preference number: 4 (lower is better)
Translates to: VLGPLQLERKLVPLPDLNAARGT*ACLAMS
Trigger: TGACATGGCTAAGCAGGCTCAGGTGCCCCTGGCAGC...ATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp GCAGGGATGTATGGAATAGAAAGAGCTTCCCTGCACACTCAGCAGCCTTCAGAGGCTGCCAGGGGCACCTaGGCCTGCTTAGCCATGTCA +
Preference number: 4 (lower is better)
Translates to: AGMYGIERASLHTQQPSEAARGT*ACLAMS
Trigger: TGACATGGCTAAGCAGGCTCAGGTGCCCCTGGCAGC...CTCTGAAGGCTGCTGAGTGTGCAGGGAAGCTCTTTCTATTCCATACATCCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR TCA 90 bp CCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTAGTCTAACAGTGACTTaGGCTCCTCACAGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: PLSQYQSPSGVPAGENGASLTVT*APHRGA
Trigger: GGCTCCTCTGTGAGGAGCTCAAGTCACTGTTAGACT...AGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp GAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCTTCTCCGGTCACCTCTaGCAGTGTGCCTCTCTATCC +
Preference number: 4 (lower is better)
Translates to: EPSSVGASPAGKEAGTSTFSGHL*QCASLS
Trigger: GGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAA...GGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp TTCCCTGGGGCCTCTGCAATGGGCAGGGATGTATGGAATAGAAAGAGCTTCCCTGAGGAGGCAGCTCACTaGGTTGAGGGCTTGGGATGG +
Preference number: 4 (lower is better)
Translates to: FPGASAMGRDVWNRKSFPEEAAH*VEGLGW
Trigger: CCATCCCAAGCCCTCAACTCAGTGAGCTGCCTCCTC...AGGGAAGCTCTTTCTATTCCATACATCCCTGCCCATTGCAGAGGCCCCAGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp CCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTACAGCACCGCTGATCTaGATTCCAGACAGCTGCGTA +
Preference number: 4 (lower is better)
Translates to: PLSQYQSPSGVPAGENGATAPLI*IPDSCV
Trigger: TACGCAGCTGTCTGGAATGCAGATCAGCGGTGCTGT...AGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp GCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGGCTGCTGCGGGGAGTaGATAGGTGGCAGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: ASWGWKITVSHSVNTKAQGCCGE*IGGSGP
Trigger: GGGACCACTGCCACCTATGCACTCCCCGCAGCAGCC...TTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp TGGCCCCGTACTCCAGTAACAAATGGCTCTGTACCCCGGTTGTTCCTGTCATCTCGGTTTGATGACTGCTaGCAGGGGCACCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: WPRTPVTNGSVPRLFLSSRFDDC*QGHLSL
Trigger: CAGGCTCAGGTGCCCCTGGCAGCAGTCATCAAACCG...AGATGACAGGAACAACCGGGGTACAGAGCCATTTGTTACTGGAGTACGGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp CTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTCAGCGGTTTGATGACTaGTGCCAGGGGCACCTGAGC +
Preference number: 4 (lower is better)
Translates to: LTTFLSTTYGLYPSSCAPQRFDD*CQGHLS
Trigger: GCTCAGGTGCCCCTGGCAGCAGTCATCAAACCGCTG...AGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp TGGCCCCGTACTCCAGTAACAAATGGCTCTGTACCCCGGTTGTTCCTGTCATCTCAGCGGTTTGATGACTaGTGCCAGGGGCACCTGAGC +
Preference number: 4 (lower is better)
Translates to: WPRTPVTNGSVPRLFLSSQRFDD*CQGHLS
Trigger: GCTCAGGTGCCCCTGGCAGCAGTCATCAAACCGCTG...AGATGACAGGAACAACCGGGGTACAGAGCCATTTGTTACTGGAGTACGGGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp CCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCTCCAAACCCCCAATACCCTCTGGGGGCAGCCTTaGCAGCGGTTTGATGACTGC +
Preference number: 4 (lower is better)
Translates to: PKGHIILPGSGCLQTPNTLWGQP*QRFDDC
Trigger: GCAGTCATCAAACCGCTGGCAAGGCTGCCCCCAGAG...GGTATTGGGGGTTTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp AGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTACTCTGGGGGCAGCCTTaGCAGCGGTTTGATGACTGC +
Preference number: 4 (lower is better)
Translates to: SSVSRGSSEWDVNWLCEVLWGQP*QRFDDC
Trigger: GCAGTCATCAAACCGCTGGCAAGGCTGCCCCCAGAG...TACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCAGCACGGATACCAGTaGTTGTCCGGACCCGCATCA +
Preference number: 4 (lower is better)
Translates to: LQNHPVLGPLQLERKLVPQHGYQ*LSGPAS
Trigger: TGATGCGGGTCCGGACAAGCACTGGTATCCGTGCTG...AGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp GCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCCACTTGCTTTAGCTCAGGGCCAGATTATGGATaGGGAGCCGACGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: AFWKLAWALCHLPTCFSSGPDYG*GADAAL
Trigger: CAGGGCAGCGTCGGCTCCGCATCCATAATCTGGCCC...TGAGCTAAAGCAAGTGGGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR GCA 90 bp TCTGACATCCTGGGGTGCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCTTGCCAGGGTCTGGGTaGCTCCAAACCCCCAATACC +
Preference number: 4 (lower is better)
Translates to: SDILGCFLEASLGPMPFTLPGSG*LQTPNT
Trigger: GGTATTGGGGGTTTGGAGGCACCCAGACCCTGGCAA...GGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTGAATGGCGGGGGCTGTaGACCCTGATTGCCCACCAT +
Preference number: 4 (lower is better)
Translates to: LTTFLSTTYGLYPSSCAPEWRGL*TLIAHH
Trigger: ATGGTGGGCAATCAGGGTCCACAGCCCCCGCCATTC...AGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TTCCCTGGGGCCTCTGCAATGGGCAGGGATGTATGGAATAGAAAGAGCTTCCCTGAATGGCGGGGGCTGTaGACCCTGATTGCCCACCAT +
Preference number: 4 (lower is better)
Translates to: FPGASAMGRDVWNRKSFPEWRGL*TLIAHH
Trigger: ATGGTGGGCAATCAGGGTCCACAGCCCCCGCCATTC...AGGGAAGCTCTTTCTATTCCATACATCCCTGCCCATTGCAGAGGCCCCAGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp GAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCTCTCCTTGGCCAAACTaGCCATATGCAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: EPSSVGASPAGKEAGTSTSPWPN*PYAAWP
Trigger: TGGCCAGGCTGCATATGGCCAGTTTGGCCAAGGAGA...GGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGGCCCACAGGGGCCAATaGGGACCCAAATGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: LLLGDWSKGTHNIARVWVAHRGQ*GPKWLR
Trigger: TCTCAGCCATTTGGGTCCCCATTGGCCCCTGTGGGC...CACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TGCATGAAGGGACACATGTATGCTTTGCAGCGGTTGCAGCGCAAAGGGCCAGATGCCCACAGGGGCCAATaGGGACCCAAATGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: CMKGHMYALQRLQRKGPDAHRGQ*GPKWLR
Trigger: TCTCAGCCATTTGGGTCCCCATTGGCCCCTGTGGGC...ATCTGGCCCTTTGCGCTGCAACCGCTGCAAAGCATACATGTGTCCCTTCATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp TGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCTCCAAGATGGGGCAGATCGCTaGGGAGTCTGGATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: WETGPKGHIILPGSGCLQDGADR*GVWIPG
Trigger: TCCTGGGATCCAGACTCCCCAGCGATCTGCCCCATC...TTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCCTGTCCAGGCAGGAGTaGACCAGTCATCGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: YRTIQCWGLSSWKGSWYLLSRQE*TSHRRQ
Trigger: CTGCCTTCGATGACTGGTCCACTCCTGCCTGGACAG...GAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp GATAACTGCCCGAGACTCATTGACGTTGACCAGGAAGCCATCCAGCAGTGGCACCTGTCCAGGCAGGAGTaGACCAGTCATCGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: DNCPRLIDVDQEAIQQWHLSRQE*TSHRRQ
Trigger: CTGCCTTCGATGACTGGTCCACTCCTGCCTGGACAG...GTGCCACTGCTGGATGGCTTCCTGGTCAACGTCAATGAGTCTCGGGCAGTTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp TCCTGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGGACACATGGTTGGGCTaGCTCACTGAGGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: SCLPLSSWETGPKGHIILDTWLG*LTEGPP
Trigger: TGGAGGGCCCTCAGTGAGCCAGCCCAACCATGTGTC...CAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TCTGACATCCTGGGGTGCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCGTGAAGACACATGGTTaGGCTGGCTCACTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SDILGCFLEASLGPMPFTVKTHG*AGSLRA
Trigger: GGCCCTCAGTGAGCCAGCCCAACCATGTGTCTTCAC...GGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CCA 90 bp AGAAGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTGCATAGGTGGCAGTaGTCCCAGGGGCCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: RSSVSRGSSEWDVNWLCEVHRWQ*SQGPSH
Trigger: ATGACTGGGCCCCTGGGACCACTGCCACCTATGCAC...CTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGTGCATAGGTGGCAGTaGTCCCAGGGGCCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: CLPLSSWETGPKGHIILPVHRWQ*SQGPSH
Trigger: ATGACTGGGCCCCTGGGACCACTGCCACCTATGCAC...TGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCATTGGGGCTGATAGCCTaGCTGCTGCGGGGAGTGCAT +
Preference number: 4 (lower is better)
Translates to: CLPLSSWETGPKGHIILPLGLIA*LLRGVH
Trigger: ATGCACTCCCCGCAGCAGCCAGGCTATCAGCCCCAA...TGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp ATAACTGCCCGAGACTCATTGACGTTGACCAGGAAGCCATCCAGCAGTGGCACATTGGGGCTGATAGCCTaGCTGCTGCGGGGAGTGCAT +
Preference number: 4 (lower is better)
Translates to: ITARDSLTLTRKPSSSGTLGLIA*LLRGVH
Trigger: ATGCACTCCCCGCAGCAGCCAGGCTATCAGCCCCAA...TGTGCCACTGCTGGATGGCTTCCTGGTCAACGTCAATGAGTCTCGGGCAGTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp AGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATCCACGGAGTGATCATCAAGCTGACTGCCAAAGGTaGGTGCTGCTGGGTAGGGGC +
Preference number: 4 (lower is better)
Translates to: SSPVTSDSVPLYPRSDHQADCQR*VLLGRG
Trigger: GCCCCTACCCAGCAGCACCCACCTTTGGCAGTCAGC...TTGATGATCACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCTCTGCCTATGGGCAGGGATGTATaGAATAGAAAGAGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: KAQAVSQQERTALQLPLPMGRDV*NRKSFP
Trigger: AGGGAAGCTCTTTCTATTCCATACATCCCTGCCCAT...AGGCAGAGGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CCAACAACCTTCTGGACATCACGACGCAGGTCACTCAGGAACCGCTCCTGGTCGCTGGGGCCTCTGCAATaGGCAGGGATGTATGGAATA +
Preference number: 4 (lower is better)
Translates to: PTTFWTSRRRSLRNRSWSLGPLQ*AGMYGI
Trigger: TATTCCATACATCCCTGCCCATTGCAGAGGCCCCAG...CGACCAGGAGCGGTTCCTGAGTGACCTGCGTCGTGATGTCCAGAAGGTTGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp GGTAGAATGAGGGAACAGGGGCACCTTCCATCAGCAGGACATGACAGAGTGGCAGGGCCACACACTCTTTaGCCAGGGTCTGATAGGCAC +
Preference number: 4 (lower is better)
Translates to: GRMREQGHLPSAGHDRVAGPHTL*PGSDRH
Trigger: GTGCCTATCAGACCCTGGCCAAAGAGTGTGTGGCCC...TGCCACTCTGTCATGTCCTGCTGATGGAAGGTGCCCCTGTTCCCTCATTCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp GCCTCCATAATTAGACTGAGGGCCCCGGGCTGGTCCGAAGGAACCATTTTGTTGGGGCCACACACTCTTTaGCCAGGGTCTGATAGGCAC +
Preference number: 4 (lower is better)
Translates to: ASIIRLRAPGWSEGTILLGPHTL*PGSDRH
Trigger: GTGCCTATCAGACCCTGGCCAAAGAGTGTGTGGCCC...CAACAAAATGGTTCCTTCGGACCAGCCCGGGGCCCTCAGTCTAATTATGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp CCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCATCTACACAGCAGCCTTaGGCCACACACTCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: PLSCPQASWGWKITVSHSSTQQP*ATHSLA
Trigger: GGCCAAAGAGTGTGTGGCCCAAGGCTGCTGTGTAGA...TGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp GCCTCCATAATTAGACTGAGGGCCCCGGGCTGGTCCGAAGGAACCATTTTGTTGGAGCCACCAGTGAGCTaGGGCACAACAGAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: ASIIRLRAPGWSEGTILLEPPVS*GTTESV
Trigger: CACACTCTCTGTTGTGCCCCAGCTCACTGGTGGCTC...CAACAAAATGGTTCCTTCGGACCAGCCCGGGGCCCTCAGTCTAATTATGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp AACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGGCTGCCCTGCACAGCTaGTGTAAAGCAGGGCACACT +
Preference number: 4 (lower is better)
Translates to: NCQPLSQYQSPSGVPAGEAALHS*CKAGHT
Trigger: AGTGTGCCCTGCTTTACACCAGCTGTGCAGGGCAGC...CTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp GATAACTGCCCGAGACTCATTGACGTTGACCAGGAAGCCATCCAGCAGTGGCACGCTGCCCTGCACAGCTaGTGTAAAGCAGGGCACACT +
Preference number: 4 (lower is better)
Translates to: DNCPRLIDVDQEAIQQWHAALHS*CKAGHT
Trigger: AGTGTGCCCTGCTTTACACCAGCTGTGCAGGGCAGC...GTGCCACTGCTGGATGGCTTCCTGGTCAACGTCAATGAGTCTCGGGCAGTTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp CCTGGGGCCTCTGCAATGGGCAGGGATGTATGGAATAGAAAGAGCTTCCCTGCATTCAGGGCCAGATTATaGATGCGGAGCCGACGCTGC +
Preference number: 4 (lower is better)
Translates to: PGASAMGRDVWNRKSFPAFRARL*MRSRRC
Trigger: GCAGCGTCGGCTCCGCATCCATAATCTGGCCCTGAA...TGCAGGGAAGCTCTTTCTATTCCATACATCCCTGCCCATTGCAGAGGCCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp GAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCTATAGATCAGCCAGCTaGGTGCAGCAGTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: EPSSVGASPAGKEAGTSTYRSAS*VQQFRA
Trigger: GGCCCTGAACTGCTGCACCCAGCTGGCTGATCTATA...GGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp GAGGAGGTGAAGACACATGGTTGGGCTGGCTCACTGAGGGCCCTCCAAAACTCTTATAGATCAGCCAGCTaGGTGCAGCAGTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: EEVKTHGWAGSLRALQNSYRSAS*VQQFRA
Trigger: GGCCCTGAACTGCTGCACCCAGCTGGCTGATCTATA...AGAGTTTTGGAGGGCCCTCAGTGAGCCAGCCCAACCATGTGTCTTCACCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp CCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAAGGATCTGGGCACACTaGGTGATGAGCGTGTCACGA +
Preference number: 4 (lower is better)
Translates to: PLSCPQASWGWKITVSHSRIWAH*VMSVSR
Trigger: TCGTGACACGCTCATCACCCAGTGTGCCCAGATCCT...TGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTGGCTCGAACTGCTGGTaGTTCGGTAGTACTCTCAAC +
Preference number: 4 (lower is better)
Translates to: PLSQYQSPSGVPAGENGAGSNCW*FGSTLN
Trigger: GTTGAGAGTACTACCGAACCACCAGCAGTTCGAGCC...AGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTTGGACAACACCCTGTTaGACGCTTGCTCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: LQNHPVLGPLQLERKLVPWTTPC*TLAPTQ
Trigger: CTGGGTGGGAGCAAGCGTCCAACAGGGTGTTGTCCA...AGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTCTGCCTCTCTCCCCAACAACCCCGGGCCTGGAGAAGCAGTGTTTCTCGTGGGGGCCTCGAACCTTCTTaGACAGTGGATTATCCAGAA +
Preference number: 4 (lower is better)
Translates to: LCLSPQQPRAWRSSVSRGGLEPS*TVDYPE
Trigger: TTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCC...CCCACGAGAAACACTGCTTCTCCAGGCCCGGGGTTGTTGGGGAGAGAGGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTTCCTGGGGTGCTTTCTaGAAGCTAGCCTGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: LQNHPVLGPLQLERKLVPSWGAF*KLAWAL
Trigger: TAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGA...AGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp GCCCCACCCTCCCTAGGTAGAAAGTCTAACAGTGACTTGAGCTCCTCACAGAGGTCCTGGGGTGCTTTCTaGAAGCTAGCCTGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: APPSLGRKSNSDLSSSQRSWGAF*KLAWAL
Trigger: TAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGA...CCTCTGTGAGGAGCTCAAGTCACTGTTAGACTTTCTACCTAGGGAGGGTGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp CCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTAATATTGCCAGGGTCTaGGTGCCTCCAAACCCCCAA +
Preference number: 4 (lower is better)
Translates to: PLSQYQSPSGVPAGENGANIARV*VPPNPQ
Trigger: TTGGGGGTTTGGAGGCACCCAGACCCTGGCAATATT...AGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCCTCCTCTTGGGAGACTaGTCCAAAGGGACACATAAT +
Preference number: 4 (lower is better)
Translates to: QYQSPSGVPAGENGAPAALLLGD*SKGTHN
Trigger: ATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAG...GGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTGTCGGACATAGGCACGGTCATCAGTAGTGACTTCAGCTCCAGGCTGCAGGACACTGAGTTGAGGGCTTaGGATGGCATCAGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LSDIGTVISSDFSSRLQDTELRA*DGIRVQ
Trigger: CTGGACCCTGATGCCATCCCAAGCCCTCAACTCAGT...GTCCTGCAGCCTGGAGCTGAAGTCACTACTGATGACCGTGCCTATGTCCGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR TCA 90 bp AGGGTCTGGGTGCCTCCAAACCCCCAATACCGAATCATATACAGTGAACTGAGAGGGGGCTGTGGACCCTaGTTGCCCACCATAGCTGGA +
Preference number: 4 (lower is better)
Translates to: RVWVPPNPQYRIIYSELRGGCGP*LPTIAG
Trigger: TCCAGCTATGGTGGGCAATCAGGGTCCACAGCCCCC...TCTCAGTTCACTGTATATGATTCGGTATTGGGGGTTTGGAGGCACCCAGACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp AGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTAGGAAGGTGGGGCTCTTaGCATACCTTGGGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: SSVSRGSSEWDVNWLCEVGRWGS*HTLGRC
Trigger: ACACCTCCCCAAGGTATGTCAAGAGCCCCACCTTCC...TACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CAAGAAGGACTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTGGGCCACAGCACCGCTaGTCTGCATTCCAGACAGCT +
Preference number: 4 (lower is better)
Translates to: QEGLTTFLSTTYGLYPSSGPQHR*SAFQTA
Trigger: AGCTGTCTGGAATGCAGATCAGCGGTGCTGTGGCCC...AGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAGTCCTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp GCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCCACTTGCTTTAGCTCAGGGCCACAGCACCGCTaGTCTGCATTCCAGACAGCT +
Preference number: 4 (lower is better)
Translates to: AFWKLAWALCHLPTCFSSGPQHR*SAFQTA
Trigger: AGCTGTCTGGAATGCAGATCAGCGGTGCTGTGGCCC...TGAGCTAAAGCAAGTGGGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR TCA 90 bp AGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATCCACGGAGTGATCATCAAGTCTGGATCCCAGGATaGCCTTGGGCCTGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: SSPVTSDSVPLYPRSDHQVWIPG*PWAWLR
Trigger: CCTTAGCCAGGCCCAAGGTCATCCTGGGATCCAGAC...TTGATGATCACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CCTGGGGCCTCTGCAATGGGCAGGGATGTATGGAATAGAAAGAGCTTCCCTGCACAGAGCTTGAGGAGGTaGAGACACATGGTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PGASAMGRDVWNRKSFPAQSLRR*RHMVGL
Trigger: CAGCCCAACCATGTGTCTTCACCTCCTCAAGCTCTG...TGCAGGGAAGCTCTTTCTATTCCATACATCCCTGCCCATTGCAGAGGCCCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR TCA 90 bp AAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGCCAGGGGGCAGAGCTTaGGGAGGTGAAGACACATGG +
Preference number: 4 (lower is better)
Translates to: KITVSHSVNTKAQAVSQQPGGRA*GGEDTW
Trigger: CCATGTGTCTTCACCTCCTCAAGCTCTGCCCCCTGG...CTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp ATGAGGCCTCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCGCCAACGCGGATTGCTaGCTCTTCTGCCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: MRPRTFLDSGLSRTGRTLANADC*LFCPTL
Trigger: GAGGGTGGGGCAGAAGAGTCAGCAATCCGCGTTGGC...GAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR TCA 90 bp AGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTAAGACAGAGCCACCAGTaGGCTGGGGCACAACAGAGA +
Preference number: 4 (lower is better)
Translates to: SSVSRGSSEWDVNWLCEVRQSHQ*AGAQQR
Trigger: TCTCTGTTGTGCCCCAGCTCACTGGTGGCTCTGTCT...TACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CTAGCCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCAAAACCACTGGTGATCTaGCTGAAGGAGGAGACGCTG +
Preference number: 4 (lower is better)
Translates to: LALVLPPSQLGLEDNCQPKPLVI*LKEETL
Trigger: CAGCGTCTCCTCCTTCAGTCAGATCACCAGTGGTTT...TGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCACCCGTAAGCTATCAATaGGGCCTCGAACCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: PLSCPQASWGWKITVSHSPVSYQ*GLEPSW
Trigger: CCAAGAAGGTTCGAGGCCTCATTGATAGCTTACGGG...TGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp TCTGACATCCTGGGGTGCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCTTCTCCGGTCACCTCTaGCAGTGTGCCTCTCTATCC +
Preference number: 4 (lower is better)
Translates to: SDILGCFLEASLGPMPFTFSGHL*QCASLS
Trigger: GGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAA...GGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp GAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCAAACCACTGGGGGGACCCAAATGGCTaGGACCCAGGCAGCCTTGGG +
Preference number: 4 (lower is better)
Translates to: EPSWTVDYPELAEHSNHWGDPNG*DPGSLG
Trigger: CCCAAGGCTGCCTGGGTCTCAGCCATTTGGGTCCCC...CCAGTGGTTTGAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR TCA 90 bp TTCCCTGGGGCCTCTGCAATGGGCAGGGATGTATGGAATAGAAAGAGCTTCCCTGGCAGCTCACTGAGTTaGGGGCTTGGGATGGCATCA +
Preference number: 4 (lower is better)
Translates to: FPGASAMGRDVWNRKSFPGSSLS*GLGMAS
Trigger: TGATGCCATCCCAAGCCCTCAACTCAGTGAGCTGCC...AGGGAAGCTCTTTCTATTCCATACATCCCTGCCCATTGCAGAGGCCCCAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp TGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCTCCAAGCCAAACTGGCCATATaGAGCCTGGCCACAAGGAGC +
Preference number: 4 (lower is better)
Translates to: WETGPKGHIILPGSGCLQAKLAI*SLATRS
Trigger: GCTCCTTGTGGCCAGGCTGCATATGGCCAGTTTGGC...TTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp AGAAACTTGACTGCTAACCTCCAGGCCCAAGAAGGACTGACCACTTTTCTCTCCACTGCCAAAGGTGGGTaGTGCTGGGTAGGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RNLTANLQAQEGLTTFLSTAKGG*CWVGAS
Trigger: GGAGGCCCCTACCCAGCAGCACCCACCTTTGGCAGT...GGAGAGAAAAGTGGTCAGTCCTTCTTGGGCCTGGAGGTTAGCAGTCAAGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp ATGAGGCCTCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCACTGCCAAAGGTGGGTaGTGCTGGGTAGGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: MRPRTFLDSGLSRTGRTLTAKGG*CWVGAS
Trigger: GGAGGCCCCTACCCAGCAGCACCCACCTTTGGCAGT...GAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR GCA 90 bp GCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCCACTTGCTTTAGCTCACGGTTTGATGACTGCTaGCAGGGGCACCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: AFWKLAWALCHLPTCFSSRFDDC*QGHLSL
Trigger: CAGGCTCAGGTGCCCCTGGCAGCAGTCATCAAACCG...TGAGCTAAAGCAAGTGGGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR GCA 90 bp GAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCATGCTTTGCAGCGGTTaGAGCGCAAAGGGCCAGATT +
Preference number: 4 (lower is better)
Translates to: EPSSVGASPAGKEAGTSTMLCSG*SAKGQI
Trigger: AATCTGGCCCTTTGCGCTGCAACCGCTGCAAAGCAT...GGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTGACACATGTATGCTTTaGAGCGGTTGCAGCGCAAAG +
Preference number: 4 (lower is better)
Translates to: PLSQYQSPSGVPAGENGADTCML*SGCSAK
Trigger: CTTTGCGCTGCAACCGCTGCAAAGCATACATGTGTC...AGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp TACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTTTCCCTGGGGCCTCTaGAATGGGCAGGGATGTATG +
Preference number: 4 (lower is better)
Translates to: YRTIQCWGLSSWKGSWYLFPWGL*NGQGCM
Trigger: CATACATCCCTGCCCATTGCAGAGGCCCCAGGGAAA...GAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp AACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGTTTCCCTGGGGCCTCTaGAATGGGCAGGGATGTATG +
Preference number: 4 (lower is better)
Translates to: NCQPLSQYQSPSGVPAGEFPWGL*NGQGCM
Trigger: CATACATCCCTGCCCATTGCAGAGGCCCCAGGGAAA...CTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp TCTGACATCCTGGGGTGCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCTTTCCCTGGGGCCTCTaGAATGGGCAGGGATGTATG +
Preference number: 4 (lower is better)
Translates to: SDILGCFLEASLGPMPFTFPWGL*NGQGCM
Trigger: CATACATCCCTGCCCATTGCAGAGGCCCCAGGGAAA...GGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000635550.1
CDS-3UTR GCA 90 bp AGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATCCACGGAGTGATCATCAAGAGCCGACGCTGCCCTaGACAGCTGGTGTAAAGCAG +
Preference number: 4 (lower is better)
Translates to: SSPVTSDSVPLYPRSDHQEPTLP*TAGVKQ
Trigger: CTGCTTTACACCAGCTGTGCAGGGCAGCGTCGGCTC...TTGATGATCACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp GCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCCACTTGCTTTAGCTCAGAGCCGACGCTGCCCTaGACAGCTGGTGTAAAGCAG +
Preference number: 4 (lower is better)
Translates to: AFWKLAWALCHLPTCFSSEPTLP*TAGVKQ
Trigger: CTGCTTTACACCAGCTGTGCAGGGCAGCGTCGGCTC...TGAGCTAAAGCAAGTGGGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR GCA 90 bp AGAAACTTGACTGCTAACCTCCAGGCCCAAGAAGGACTGACCACTTTTCTCTCCGGGCCAGATTATGGATaGGGAGCCGACGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: RNLTANLQAQEGLTTFLSGPDYG*GADAAL
Trigger: CAGGGCAGCGTCGGCTCCGCATCCATAATCTGGCCC...GGAGAGAAAAGTGGTCAGTCCTTCTTGGGCCTGGAGGTTAGCAGTCAAGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CCAACAACCTTCTGGACATCACGACGCAGGTCACTCAGGAACCGCTCCTGGTCGTGTTTGCTGATAGCCTaGTACTGGGCCATTGTAGGC +
Preference number: 4 (lower is better)
Translates to: PTTFWTSRRRSLRNRSWSCLLIA*YWAIVG
Trigger: GCCTACAATGGCCCAGTACCAGGCTATCAGCAAACA...CGACCAGGAGCGGTTCCTGAGTGACCTGCGTCGTGATGTCCAGAAGGTTGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp AGAAGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGTGGCCATATGCAGCCTaGCCACAAGGAGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: RSSVSRGSSEWDVNWLCEWPYAA*PQGACA
Trigger: AGCACAGGCTCCTTGTGGCCAGGCTGCATATGGCCA...CTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATGGGCTGAAGCACAGGTaGCTGGTTGCCCACAGGGGC +
Preference number: 4 (lower is better)
Translates to: WGLSSWKGSWYLYQILIYGLKHR*LVAHRG
Trigger: GCCCCTGTGGGCAACCAGCCACCTGTGCTTCAGCCC...ATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CAAGAAGGACTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTGATGGGGCAGATCGCTaGGGAGTCTGGATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: QEGLTTFLSTTYGLYPSSDGADR*GVWIPG
Trigger: TCCTGGGATCCAGACTCCCCAGCGATCTGCCCCATC...AGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAGTCCTTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCTCCAAACCCCCAATACCCTGTCCAGGCAGGAGTaGACCAGTCATCGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: PKGHIILPGSGCLQTPNTLSRQE*TSHRRQ
Trigger: CTGCCTTCGATGACTGGTCCACTCCTGCCTGGACAG...GGTATTGGGGGTTTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGTGAAGACACATGGTTaGGCTGGCTCACTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: CLPLSSWETGPKGHIILPVKTHG*AGSLRA
Trigger: GGCCCTCAGTGAGCCAGCCCAACCATGTGTCTTCAC...TGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TTCCCTGGGGCCTCTGCAATGGGCAGGGATGTATGGAATAGAAAGAGCTTCCCTGTGAAGACACATGGTTaGGCTGGCTCACTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: FPGASAMGRDVWNRKSFPVKTHG*AGSLRA
Trigger: GGCCCTCAGTGAGCCAGCCCAACCATGTGTCTTCAC...AGGGAAGCTCTTTCTATTCCATACATCCCTGCCCATTGCAGAGGCCCCAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp CTGTCGGACATAGGCACGGTCATCAGTAGTGACTTCAGCTCCAGGCTGCAGGACGGGCCAGATTCCCCATaGTCCACAACATACGGTGAA +
Preference number: 4 (lower is better)
Translates to: LSDIGTVISSDFSSRLQDGPDSP*STTYGE
Trigger: TTCACCGTATGTTGTGGACCATGGGGAATCTGGCCC...GTCCTGCAGCCTGGAGCTGAAGTCACTACTGATGACCGTGCCTATGTCCGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp CCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCTGCAAAAACAGCACTaGAAACGCCTCCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PLSQYQSPSGVPAGENGALQKQH*KRLPPS
Trigger: TGAAGGAGGGAGGCGTTTCCAGTGCTGTTTTTGCAG...AGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTAGCCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTGGGGCCTCTGCAATaGGCAGGGATGTATGGAATA +
Preference number: 4 (lower is better)
Translates to: LALVLPPSQLGLEDNCQPLGPLQ*AGMYGI
Trigger: TATTCCATACATCCCTGCCCATTGCAGAGGCCCCAG...TGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp GGTGATGAGCGTGTCACGAACAGCCTTCACAGGGCTATTCAGGACTCCCCGATAGTTCTTCAGTTTCCCTaGGGCCTCTGCAATGGGCAG +
Preference number: 4 (lower is better)
Translates to: GDERVTNSLHRAIQDSPIVLQFP*GLCNGQ
Trigger: CTGCCCATTGCAGAGGCCCCAGGGAAACTGAAGAAC...TATCGGGGAGTCCTGAATAGCCCTGTGAAGGCTGTTCGTGACACGCTCATCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp GGTGATGAGCGTGTCACGAACAGCCTTCACAGGGCTATTCAGGACTCCCCGATATCTACACAGCAGCCTTaGGCCACACACTCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: GDERVTNSLHRAIQDSPISTQQP*ATHSLA
Trigger: GGCCAAAGAGTGTGTGGCCCAAGGCTGCTGTGTAGA...TATCGGGGAGTCCTGAATAGCCCTGTGAAGGCTGTTCGTGACACGCTCATCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp TGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGCTGCCCTGCACAGCTaGTGTAAAGCAGGGCACACT +
Preference number: 4 (lower is better)
Translates to: CLPLSSWETGPKGHIILPAALHS*CKAGHT
Trigger: AGTGTGCCCTGCTTTACACCAGCTGTGCAGGGCAGC...TGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAGGATCTGGGCACACTaGGTGATGAGCGTGTCACGA +
Preference number: 4 (lower is better)
Translates to: NCQPLSQYQSPSGVPAGERIWAH*VMSVSR
Trigger: TCGTGACACGCTCATCACCCAGTGTGCCCAGATCCT...CTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp GAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCTTCTGGAAGCTAGCCTaGGCCCTATGCCATTTACCC +
Preference number: 4 (lower is better)
Translates to: EPSSVGASPAGKEAGTSTFWKLA*ALCHLP
Trigger: GGGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAA...GGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCATCCTGGGGTGCTTTCTaGAAGCTAGCCTGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: CLPLSSWETGPKGHIILPSWGAF*KLAWAL
Trigger: TAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGA...TGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTAGCCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCAAGAACCATCCAGTGTTaGGGCCTCTCCAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LALVLPPSQLGLEDNCQPRTIQC*GLSSWK
Trigger: TTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCT...TGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCCGTGGGAGCTCAGAGTaGGATGTGAACTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: YRTIQCWGLSSWKGSWYLRGSSE*DVNWLC
Trigger: ACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACG...GAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCATGCCCCCAAGCCAGTTaGGGTTGGAAGATAACTGTC +
Preference number: 4 (lower is better)
Translates to: PLSCPQASWGWKITVSHSCPQAS*GWKITV
Trigger: GACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCA...TGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AAGGATCAACTGTCCTGCAGAGGAGGGGCTAGCACAGTTCTTTCTGTAACAGGCGTTGAGGGCTTGGGATaGCATCAGGGTCCAGGCGCT +
Preference number: 4 (lower is better)
Translates to: KDQLSCRGGASTVLSVTGVEGLG*HQGPGA
Trigger: AGCGCCTGGACCCTGATGCCATCCCAAGCCCTCAAC...GCCTGTTACAGAAAGAACTGTGCTAGCCCCTCCTCTGCAGGACAGTTGATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR TCA 90 bp AGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATCCACGGAGTGATCATCAAGGAAGGTGGGGCTCTTaGCATACCTTGGGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: SSPVTSDSVPLYPRSDHQGRWGS*HTLGRC
Trigger: ACACCTCCCCAAGGTATGTCAAGAGCCCCACCTTCC...TTGATGATCACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CAAGAAGGACTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTGGAAGGTGGGGCTCTTaGCATACCTTGGGGAGGTGT +
Preference number: 4 (lower is better)
Translates to: QEGLTTFLSTTYGLYPSSGRWGS*HTLGRC
Trigger: ACACCTCCCCAAGGTATGTCAAGAGCCCCACCTTCC...AGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAGTCCTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CAAGAAGGACTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTGGCAGCCTTTGCATCTaGACAGTGGAGCTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: QEGLTTFLSTTYGLYPSSGSLCI*TVELGP
Trigger: TGGGCCAAGCTCCACTGTTCAGATGCAAAGGCTGCC...AGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAGTCCTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp AGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTATTGGGCAGCCTTTGCATCTaGACAGTGGAGCTTGGCCCA +
Preference number: 4 (lower is better)
Translates to: SVSRGSSEWDVNWLCEVLGSLCI*TVELGP
Trigger: TGGGCCAAGCTCCACTGTTCAGATGCAAAGGCTGCC...CAATACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCTCCAAACCCCCAATACCCAGAGCTTGAGGAGGTaGAGACACATGGTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: PKGHIILPGSGCLQTPNTQSLRR*RHMVGL
Trigger: CAGCCCAACCATGTGTCTTCACCTCCTCAAGCTCTG...GGTATTGGGGGTTTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTAGTCTAACAGTGACTTaGGCTCCTCACAGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LQNHPVLGPLQLERKLVPSLTVT*APHRGA
Trigger: GGCTCCTCTGTGAGGAGCTCAAGTCACTGTTAGACT...AGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp AAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGAGACAGAGCCACCAGTaGGCTGGGGCACAACAGAGA +
Preference number: 4 (lower is better)
Translates to: KITVSHSVNTKAQAVSQQRQSHQ*AGAQQR
Trigger: TCTCTGTTGTGCCCCAGCTCACTGGTGGCTCTGTCT...CTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp TACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCCCCGTAAGCTATCAATaGGGCCTCGAACCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: YRTIQCWGLSSWKGSWYLPVSYQ*GLEPSW
Trigger: CCAAGAAGGTTCGAGGCCTCATTGATAGCTTACGGG...GAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTATATGTTTTATCCCTAGCCCAGTCATCTGGGTaGCAGGGGGCAGAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: PPPMGYTPALVHLYVLSLAQSSG*QGAELE
Trigger: CTCAAGCTCTGCCCCCTGGCACCCAGATGACTGGGC...TAGGGATAAAACATATAGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CTATCAATGAGGCCTCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAGCCCAGTCATCTGGGTaGCAGGGGGCAGAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: LSMRPRTFLDSGLSRTGRAQSSG*QGAELE
Trigger: CTCAAGCTCTGCCCCCTGGCACCCAGATGACTGGGC...TCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCCTCATTGATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR GCA 90 bp AGAAACTTGACTGCTAACCTCCAGGCCCAAGAAGGACTGACCACTTTTCTCTCCGCCAAAGGTGGGTGCTaGTGGGTAGGGGCCTCCATA +
Preference number: 4 (lower is better)
Translates to: RNLTANLQAQEGLTTFLSAKGGC*WVGASI
Trigger: TATGGAGGCCCCTACCCAGCAGCACCCACCTTTGGC...GGAGAGAAAAGTGGTCAGTCCTTCTTGGGCCTGGAGGTTAGCAGTCAAGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTGATGTATCGGGGACTTaGATTCCCTTGGTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: PLSQYQSPSGVPAGENGADVSGT*IPLVFH
Trigger: GTGAAAGACCAAGGGAATGCAAGTCCCCGATACATC...AGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTATGCTTTGCAGCGGTTaGAGCGCAAAGGGCCAGATT +
Preference number: 4 (lower is better)
Translates to: LQNHPVLGPLQLERKLVPMLCSG*SAKGQI
Trigger: AATCTGGCCCTTTGCGCTGCAACCGCTGCAAAGCAT...AGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CCTGGGGCCTCTGCAATGGGCAGGGATGTATGGAATAGAAAGAGCTTCCCTGCAATGCTTTGCAGCGGTTaGAGCGCAAAGGGCCAGATT +
Preference number: 4 (lower is better)
Translates to: PGASAMGRDVWNRKSFPAMLCSG*SAKGQI
Trigger: AATCTGGCCCTTTGCGCTGCAACCGCTGCAAAGCAT...TGCAGGGAAGCTCTTTCTATTCCATACATCCCTGCCCATTGCAGAGGCCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp GGTGATGAGCGTGTCACGAACAGCCTTCACAGGGCTATTCAGGACTCCCCGATAGAAGGGACACATGTATaGTTTGCAGCGGTTGCAGCG +
Preference number: 4 (lower is better)
Translates to: GDERVTNSLHRAIQDSPIEGTHV*FAAVAA
Trigger: CGCTGCAACCGCTGCAAAGCATACATGTGTCCCTTC...TATCGGGGAGTCCTGAATAGCCCTGTGAAGGCTGTTCGTGACACGCTCATCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp GAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAAGCATCCACACGTTTaGCGGTATGATCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: EPSSVGASPAGKEAGTSTKHPHV*RYDPGA
Trigger: AGCACCTGGATCATACCGGCAAACGTGTGGATGCTT...GGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp GAGGAGGTGAAGACACATGGTTGGGCTGGCTCACTGAGGGCCCTCCAAAACTCTAAGCATCCACACGTTTaGCGGTATGATCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: EEVKTHGWAGSLRALQNSKHPHV*RYDPGA
Trigger: AGCACCTGGATCATACCGGCAAACGTGTGGATGCTT...AGAGTTTTGGAGGGCCCTCAGTGAGCCAGCCCAACCATGTGTCTTCACCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp AGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTATTGCAGCACGGATACCAGTaGTTGTCCGGACCCGCATCA +
Preference number: 4 (lower is better)
Translates to: SVSRGSSEWDVNWLCEVLQHGYQ*LSGPAS
Trigger: TGATGCGGGTCCGGACAAGCACTGGTATCCGTGCTG...CAATACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp AAGGATCAACTGTCCTGCAGAGGAGGGGCTAGCACAGTTCTTTCTGTAACAGGCCAGCACGGATACCAGTaGTTGTCCGGACCCGCATCA +
Preference number: 4 (lower is better)
Translates to: KDQLSCRGGASTVLSVTGQHGYQ*LSGPAS
Trigger: TGATGCGGGTCCGGACAAGCACTGGTATCCGTGCTG...GCCTGTTACAGAAAGAACTGTGCTAGCCCCTCCTCTGCAGGACAGTTGATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp GTATGGAATAGAAAGAGCTTCCCTGCACACTCAGCAGCCTTCAGAGCCTCCATTGAGCCGACGCTGCCCTaGACAGCTGGTGTAAAGCAG +
Preference number: 4 (lower is better)
Translates to: VWNRKSFPAHSAAFRASIEPTLP*TAGVKQ
Trigger: CTGCTTTACACCAGCTGTGCAGGGCAGCGTCGGCTC...AATGGAGGCTCTGAAGGCTGCTGAGTGTGCAGGGAAGCTCTTTCTATTCCATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp TACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCAAGGATCAACTGTCCTaGAGAGGAGGGGCTAGCACA +
Preference number: 4 (lower is better)
Translates to: YRTIQCWGLSSWKGSWYLKDQLS*RGGAST
Trigger: TGTGCTAGCCCCTCCTCTGCAGGACAGTTGATCCTT...GAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCATTCAGAGGCTCGAACTaGTGGTGGTTCGGTAGTACT +
Preference number: 4 (lower is better)
Translates to: PLSCPQASWGWKITVSHSFRGSN*WWFGST
Trigger: AGTACTACCGAACCACCAGCAGTTCGAGCCTCTGAA...TGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CTATCAATGAGGCCTCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAGAACGGCGCTCCAGCTaGCTCTGCCTCTCTCCCCAA +
Preference number: 4 (lower is better)
Translates to: LSMRPRTFLDSGLSRTGRERRSS*LCLSPQ
Trigger: TTGGGGAGAGAGGCAGAGGCAGCTGGAGCGCCGTTC...TCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCCTCATTGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465076.5
CDS-3UTR CCA 90 bp AAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCTCTGCCTACAGGTGGAACTGACTaGTTGACGTTCATTATGAAA +
Preference number: 4 (lower is better)
Translates to: KAQAVSQQERTALQLPLPTGGTD*LTFIMK
Trigger: TTTCATAATGAACGTCAACCAGTCAGTTCCACCTGT...AGGCAGAGGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTATTGGGACTGATGATACCCTaGGTAGATGGGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SVSRGSSEWDVNWLCEVLGLMIP*VDGLGL
Trigger: CAGCCCCAGCCCATCTACCCAGGGTATCATCAGTCC...CAATACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTCCCTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTCTGATAGCCTGGTACTaGGCCATTGTAGGCTCCATA +
Preference number: 4 (lower is better)
Translates to: LPTEPSSVGASPAGKEAGLIAWY*AIVGSI
Trigger: TATGGAGCCTACAATGGCCCAGTACCAGGCTATCAG...ACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CAAGAAGGACTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTTGGCCATATGCAGCCTaGCCACAAGGAGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: QEGLTTFLSTTYGLYPSSWPYAA*PQGACA
Trigger: AGCACAGGCTCCTTGTGGCCAGGCTGCATATGGCCA...AGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAGTCCTTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGCTGTCCAGGCAGGAGTaGACCAGTCATCGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: KITVSHSVNTKAQAVSQQLSRQE*TSHRRQ
Trigger: CTGCCTTCGATGACTGGTCCACTCCTGCCTGGACAG...CTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TATAGGATGTACATCGGATGTATCGGGGACTTGCATTCCCTTGGTCTTTCACCAAGGGGCCCAGTCATCTaGGTGCCAGGGGGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: YRMYIGCIGDLHSLGLSPRGPVI*VPGGRA
Trigger: AGCTCTGCCCCCTGGCACCCAGATGACTGGGCCCCT...TGGTGAAAGACCAAGGGAATGCAAGTCCCCGATACATCCGATGTACATCCTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp AACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAAAGGTGGGTGCTGCTaGGTAGGGGCCTCCATAATT +
Preference number: 4 (lower is better)
Translates to: NCQPLSQYQSPSGVPAGEKGGCC*VGASII
Trigger: AATTATGGAGGCCCCTACCCAGCAGCACCCACCTTT...CTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTGACCTGAATAGGGCTTaGGATGGCATCAGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LTTFLSTTYGLYPSSCAPDLNRA*DGIRVQ
Trigger: CTGGACCCTGATGCCATCCCAAGCCCTATTCAGGTC...AGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CCAACAACCTTCTGGACATCACGACGCAGGTCACTCAGGAACCGCTCCTGGTCGGGACTTGCATTCCCTTaGTCTTTCACCAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: PTTFWTSRRRSLRNRSWSGLAFP*SFTRKL
Trigger: CAACTTCCTGGTGAAAGACCAAGGGAATGCAAGTCC...CGACCAGGAGCGGTTCCTGAGTGACCTGCGTCGTGATGTCCAGAAGGTTGTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp TACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCGGGCCAGATTCCCCATaGTCCACAACATACGGTGAA +
Preference number: 4 (lower is better)
Translates to: YRTIQCWGLSSWKGSWYLGPDSP*STTYGE
Trigger: TTCACCGTATGTTGTGGACCATGGGGAATCTGGCCC...GAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp GGTAGAATGAGGGAACAGGGGCACCTTCCATCAGCAGGACATGACAGAGTGGCAGAAGCCATCCAGCAGTaGCACAAACATGTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: GRMREQGHLPSAGHDRVAEAIQQ*HKHVSH
Trigger: GTGGCTGACATGTTTGTGCCACTGCTGGATGGCTTC...TGCCACTCTGTCATGTCCTGCTGATGGAAGGTGCCCCTGTTCCCTCATTCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCTCCAGCCTGGATAACTaGTACAAATACTGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: QYQSPSGVPAGENGAPAASSLDN*YKYCLC
Trigger: ACAGAGACAGTATTTGTACCAGTTATCCAGGCTGGA...GGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTTCTACACAGCAGCCTTaGGCCACACACTCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: LTTFLSTTYGLYPSSCAPSTQQP*ATHSLA
Trigger: GGCCAAAGAGTGTGTGGCCCAAGGCTGCTGTGTAGA...AGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp GTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATGCTGCCCTGCACAGCTaGTGTAAAGCAGGGCACACT +
Preference number: 4 (lower is better)
Translates to: VLGPLQLERKLVPLPDLNAALHS*CKAGHT
Trigger: AGTGTGCCCTGCTTTACACCAGCTGTGCAGGGCAGC...ATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TCCTGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGTATAGATCAGCCAGCTaGGTGCAGCAGTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SCLPLSSWETGPKGHIILYRSAS*VQQFRA
Trigger: GGCCCTGAACTGCTGCACCCAGCTGGCTGATCTATA...CAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTATATAGATCAGCCAGCTaGGTGCAGCAGTTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: SSVSRGSSEWDVNWLCEVYRSAS*VQQFRA
Trigger: GGCCCTGAACTGCTGCACCCAGCTGGCTGATCTATA...TACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTAATATTGCCAGGGTCTaGGTGCCTCCAAACCCCCAA +
Preference number: 4 (lower is better)
Translates to: LQNHPVLGPLQLERKLVPNIARV*VPPNPQ
Trigger: TTGGGGGTTTGGAGGCACCCAGACCCTGGCAATATT...AGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp GGTAGAATGAGGGAACAGGGGCACCTTCCATCAGCAGGACATGACAGAGTGGCATCTCTCCACCACCTATaGGCTATACCCCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: GRMREQGHLPSAGHDRVASLHHL*AIPQLL
Trigger: CAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGA...TGCCACTCTGTCATGTCCTGCTGATGGAAGGTGCCCCTGTTCCCTCATTCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGTGGGGCCTCTCCAGCTaGAAAGGAAGCTGGTACCTC +
Preference number: 4 (lower is better)
Translates to: KITVSHSVNTKAQAVSQQWGLSS*KGSWYL
Trigger: GAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCA...CTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTAGAACCATCCAGTGTTaGGGCCTCTCCAGCTGGAAA +
Preference number: 4 (lower is better)
Translates to: LQNHPVLGPLQLERKLVPRTIQC*GLSSWK
Trigger: TTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCT...AGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCTCCAAACCCCCAATACCCGTGGGAGCTCAGAGTaGGATGTGAACTGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PKGHIILPGSGCLQTPNTRGSSE*DVNWLC
Trigger: ACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACG...GGTATTGGGGGTTTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCAACAACCCCGGGCCTaGAGAAGCAGTGTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: LLLGDWSKGTHNIARVWVQQPRA*RSSVSR
Trigger: ACGAGAAACACTGCTTCTCCAGGCCCGGGGTTGTTG...CACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTGCCCCCAAGCCAGTTaGGGTTGGAAGATAACTGTC +
Preference number: 4 (lower is better)
Translates to: YRTIQCWGLSSWKGSWYLCPQAS*GWKITV
Trigger: GACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCA...GAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR CAA 72 bp AGCCTAGCCCTTGTCCTGCCCCCAAGCCAGTTGGGGTaGGAAGATAACTGTCAGCCACTCAGTCAATACCAA +
Preference number: 4 (lower is better)
Translates to: SLALVLPPSQLG*EDNCQPLSQYQ
Trigger: TTGGTATTGACTGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGGCTAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
3UTR CAA 72 bp AACTGCATGAAGGGACACATGTATGCTTTGCAGCGGTaGCAGCGCAAAGGGCCAGATTCCCCATGGTCCACA +
Preference number: 4 (lower is better)
Translates to: NCMKGHMYALQR*QRKGPDSPWST
Trigger: TGTGGACCATGGGGAATCTGGCCCTTTGCGCTGCAACCGCTGCAAAGCATACATGTGTCCCTTCATGCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
3UTR CAA 72 bp GCCCCACCCTCCCTAGGTAGAAAGTCTAACAGTGACTaGAGCTCCTCACAGAGGAGCCTAACAAGACCAGTC +
Preference number: 4 (lower is better)
Translates to: APPSLGRKSNSD*SSSQRSLTRPV
Trigger: GACTGGTCTTGTTAGGCTCCTCTGTGAGGAGCTCAAGTCACTGTTAGACTTTCTACCTAGGGAGGGTGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR TCA 90 bp CCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCATGGCACAGGTGGAACTaGCTGGTTGACGTTCATTAT +
Preference number: 4 (lower is better)
Translates to: PLSCPQASWGWKITVSHSWHRWN*LVDVHY
Trigger: ATAATGAACGTCAACCAGTCAGTTCCACCTGTGCCA...TGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp TGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATGGGCCACAGCACCGCTaGTCTGCATTCCAGACAGCT +
Preference number: 4 (lower is better)
Translates to: WGLSSWKGSWYLYQILIYGPQHR*SAFQTA
Trigger: AGCTGTCTGGAATGCAGATCAGCGGTGCTGTGGCCC...ATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp GAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCAAACCACTGGGTTGGGCTGGCTCACTaGGGGCCCTCCAAAACTCTG +
Preference number: 4 (lower is better)
Translates to: EPSWTVDYPELAEHSNHWVGLAH*GPSKTL
Trigger: CAGAGTTTTGGAGGGCCCTCAGTGAGCCAGCCCAAC...CCAGTGGTTTGAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR TCA 90 bp AGAAGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGAGTCTAACAGTGACTTaGGCTCCTCACAGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: RSSVSRGSSEWDVNWLCESLTVT*APHRGA
Trigger: GGCTCCTCTGTGAGGAGCTCAAGTCACTGTTAGACT...CTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp AAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCTCTGCCTAACATTTCTGGAATCTaGTCCAATAAGCTGGTGATA +
Preference number: 4 (lower is better)
Translates to: KAQAVSQQERTALQLPLPNISGI*SNKLVI
Trigger: TATCACCAGCTTATTGGATCAGATTCCAGAAATGTT...AGGCAGAGGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp GTATGGAATAGAAAGAGCTTCCCTGCACACTCAGCAGCCTTCAGAGCCTCCATTAGACAGAGCCACCAGTaGGCTGGGGCACAACAGAGA +
Preference number: 4 (lower is better)
Translates to: VWNRKSFPAHSAAFRASIRQSHQ*AGAQQR
Trigger: TCTCTGTTGTGCCCCAGCTCACTGGTGGCTCTGTCT...AATGGAGGCTCTGAAGGCTGCTGAGTGTGCAGGGAAGCTCTTTCTATTCCATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR TCA 90 bp CCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCTCCAAACCCCCAATACCAAACCACTGGTGATCTaGCTGAAGGAGGAGACGCTG +
Preference number: 4 (lower is better)
Translates to: PKGHIILPGSGCLQTPNTKPLVI*LKEETL
Trigger: CAGCGTCTCCTCCTTCAGTCAGATCACCAGTGGTTT...GGTATTGGGGGTTTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp TGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCACCCGTAAGCTATCAATaGGGCCTCGAACCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: CLPLSSWETGPKGHIILPPVSYQ*GLEPSW
Trigger: CCAAGAAGGTTCGAGGCCTCATTGATAGCTTACGGG...TGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp AGAAGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGAGGCCCAAGAAGGACTaGCCACTTTTCTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: RSSVSRGSSEWDVNWLCERPKKD*PLFSPP
Trigger: TGGTGGAGAGAAAAGTGGTCAGTCCTTCTTGGGCCT...CTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp GAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAAAGCATTCCCAATTTaGTCTCACCCGGCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: EPSSVGASPAGKEAGTSTKAFPI*SHPAPD
Trigger: ATCTGGAGCCGGGTGAGATCAAATTGGGAATGCTTT...GGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CTGTCGGACATAGGCACGGTCATCAGTAGTGACTTCAGCTCCAGGCTGCAGGACAAAGCATTCCCAATTTaGTCTCACCCGGCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: LSDIGTVISSDFSSRLQDKAFPI*SHPAPD
Trigger: ATCTGGAGCCGGGTGAGATCAAATTGGGAATGCTTT...GTCCTGCAGCCTGGAGCTGAAGTCACTACTGATGACCGTGCCTATGTCCGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR TCA 90 bp CTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTCAAACCTGGGAAGAATaGCAGCAACTGCCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: LTTFLSTTYGLYPSSCAPQTWEE*QQLPLS
Trigger: GGACAAGGGCAGTTGCTGTCATTCTTCCCAGGTTTG...AGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465076.5
CDS-3UTR GCA 90 bp TCCTGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGTGCATTCCAGACAGCTaGGTAGCCACCTGTGCACTT +
Preference number: 4 (lower is better)
Translates to: SCLPLSSWETGPKGHIILCIPDS*VATCAL
Trigger: AAGTGCACAGGTGGCTACGCAGCTGTCTGGAATGCA...CAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp TTCCCTGGGGCCTCTGCAATGGGCAGGGATGTATGGAATAGAAAGAGCTTCCCTTGCATTCCAGACAGCTaGGTAGCCACCTGTGCACTT +
Preference number: 4 (lower is better)
Translates to: FPGASAMGRDVWNRKSFPCIPDS*VATCAL
Trigger: AAGTGCACAGGTGGCTACGCAGCTGTCTGGAATGCA...AGGGAAGCTCTTTCTATTCCATACATCCCTGCCCATTGCAGAGGCCCCAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp CTTGTGCATATGACAGAGAAAGTCCACATAAGATGCTCCCCCACTCAGACTCTTGCCCAGTCATCTGGGTaGCAGGGGGCAGAGCTTGAG +
Preference number: 4 (lower is better)
Translates to: LVHMTEKVHIRCSPTQTLAQSSG*QGAELE
Trigger: CTCAAGCTCTGCCCCCTGGCACCCAGATGACTGGGC...AAGAGTCTGAGTGGGGGAGCATCTTATGTGGACTTTCTCTGTCATATGCACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR GCA 90 bp TCCTGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGGAAGGGACACATGTATaGTTTGCAGCGGTTGCAGCG +
Preference number: 4 (lower is better)
Translates to: SCLPLSSWETGPKGHIILEGTHV*FAAVAA
Trigger: CGCTGCAACCGCTGCAAAGCATACATGTGTCCCTTC...CAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGAAGGATCAACTGTCCTaGAGAGGAGGGGCTAGCACA +
Preference number: 4 (lower is better)
Translates to: LLLGDWSKGTHNIARVWVKDQLS*RGGAST
Trigger: TGTGCTAGCCCCTCCTCTGCAGGACAGTTGATCCTT...CACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp TGGCCCCGTACTCCAGTAACAAATGGCTCTGTACCCCGGTTGTTCCTGTCATCTAAGGATCAACTGTCCTaGAGAGGAGGGGCTAGCACA +
Preference number: 4 (lower is better)
Translates to: WPRTPVTNGSVPRLFLSSKDQLS*RGGAST
Trigger: TGTGCTAGCCCCTCCTCTGCAGGACAGTTGATCCTT...AGATGACAGGAACAACCGGGGTACAGAGCCATTTGTTACTGGAGTACGGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp CTAGCCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCATCTTCCACCAGGAAGTaGTTGAACAGCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: LALVLPPSQLGLEDNCQPSSTRK*LNSISI
Trigger: GATGGAGATGCTGTTCAAGCACTTCCTGGTGGAAGA...TGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCTCCAAACCCCCAATACCTCTGACATCCTGGGGTaGTTTCTGGAAGCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: PKGHIILPGSGCLQTPNTSDILG*FLEASL
Trigger: CAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA...GGTATTGGGGGTTTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp TGGCCCCGTACTCCAGTAACAAATGGCTCTGTACCCCGGTTGTTCCTGTCATCTTCTGACATCCTGGGGTaGTTTCTGGAAGCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: WPRTPVTNGSVPRLFLSSSDILG*FLEASL
Trigger: CAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA...AGATGACAGGAACAACCGGGGTACAGAGCCATTTGTTACTGGAGTACGGGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp AGAAACTTGACTGCTAACCTCCAGGCCCAAGAAGGACTGACCACTTTTCTCTCCTTGCCAGGGTCTGGGTaGCTCCAAACCCCCAATACC +
Preference number: 4 (lower is better)
Translates to: RNLTANLQAQEGLTTFLSLPGSG*LQTPNT
Trigger: GGTATTGGGGGTTTGGAGGCACCCAGACCCTGGCAA...GGAGAGAAAAGTGGTCAGTCCTTCTTGGGCCTGGAGGTTAGCAGTCAAGTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp TCCTGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGTCACCTCTGACAGTGTaGCTCTCTATCCACGGAGTG +
Preference number: 4 (lower is better)
Translates to: SCLPLSSWETGPKGHIILSPLTV*LSIHGV
Trigger: CACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGA...CAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCTCCAAACCCCCAATACCTTCTCCTTGACTCCCTaGCCTCACCAAACCACTGGT +
Preference number: 4 (lower is better)
Translates to: PKGHIILPGSGCLQTPNTFSLTP*PHQTTG
Trigger: ACCAGTGGTTTGGTGAGGGCAGGGAGTCAAGGAGAA...GGTATTGGGGGTTTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000465076.5
CDS-3UTR CCA 90 bp GGTAGAATGAGGGAACAGGGGCACCTTCCATCAGCAGGACATGACAGAGTGGCAATTGCCCACCATAGCTaGACTGATGATACCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GRMREQGHLPSAGHDRVAIAHHS*TDDTLG
Trigger: ACCCAGGGTATCATCAGTCCAGCTATGGTGGGCAAT...TGCCACTCTGTCATGTCCTGCTGATGGAAGGTGCCCCTGTTCCCTCATTCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp GCCTCCATAATTAGACTGAGGGCCCCGGGCTGGTCCGAAGGAACCATTTTGTTGCTGATAGCCTGGTACTaGGCCATTGTAGGCTCCATA +
Preference number: 4 (lower is better)
Translates to: ASIIRLRAPGWSEGTILLLIAWY*AIVGSI
Trigger: TATGGAGCCTACAATGGCCCAGTACCAGGCTATCAG...CAACAAAATGGTTCCTTCGGACCAGCCCGGGGCCCTCAGTCTAATTATGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp AGGGTCTGGGTGCCTCCAAACCCCCAATACCGAATCATATACAGTGAACTGAGATGGCCATATGCAGCCTaGCCACAAGGAGCCTGTGCT +
Preference number: 4 (lower is better)
Translates to: RVWVPPNPQYRIIYSELRWPYAA*PQGACA
Trigger: AGCACAGGCTCCTTGTGGCCAGGCTGCATATGGCCA...TCTCAGTTCACTGTATATGATTCGGTATTGGGGGTTTGGAGGCACCCAGACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCCTGAACAGTGGAGCTTaGCCCATTCTGTACATCTCC +
Preference number: 4 (lower is better)
Translates to: YRTIQCWGLSSWKGSWYLLNSGA*PILYIS
Trigger: GGAGATGTACAGAATGGGCCAAGCTCCACTGTTCAG...GAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATGCCCACAGGGGCCAATaGGGACCCAAATGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: WGLSSWKGSWYLYQILIYAHRGQ*GPKWLR
Trigger: TCTCAGCCATTTGGGTCCCCATTGGCCCCTGTGGGC...ATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TGTCTGAGGCTGGAACAGAGTCTTCTCCTTGTCTGTATTGATCAGCTTCCTGTCGATGGGGCAGATCGCTaGGGAGTCTGGATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: CLRLEQSLLLVCIDQLPVDGADR*GVWIPG
Trigger: TCCTGGGATCCAGACTCCCCAGCGATCTGCCCCATC...GACAGGAAGCTGATCAATACAGACAAGGAGAAGACTCTGTTCCAGCCTCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp GAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCAAACCACTGGGTGCATAGGTGGCAGTaGTCCCAGGGGCCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: EPSWTVDYPELAEHSNHWVHRWQ*SQGPSH
Trigger: ATGACTGGGCCCCTGGGACCACTGCCACCTATGCAC...CCAGTGGTTTGAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp TGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATCTGAGGGCCCCGGGCTaGTCCGAAGGAACCATTTTG +
Preference number: 4 (lower is better)
Translates to: WGLSSWKGSWYLYQILIYLRAPG*SEGTIL
Trigger: CAAAATGGTTCCTTCGGACCAGCCCGGGGCCCTCAG...ATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp GAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCAAACCACTGGCTGAGGGCCCCGGGCTaGTCCGAAGGAACCATTTTG +
Preference number: 4 (lower is better)
Translates to: EPSWTVDYPELAEHSNHWLRAPG*SEGTIL
Trigger: CAAAATGGTTCCTTCGGACCAGCCCGGGGCCCTCAG...CCAGTGGTTTGAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp AGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTAAAAGGTGGGTGCTGCTaGGTAGGGGCCTCCATAATT +
Preference number: 4 (lower is better)
Translates to: SSVSRGSSEWDVNWLCEVKGGCC*VGASII
Trigger: AATTATGGAGGCCCCTACCCAGCAGCACCCACCTTT...TACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCAAACCACTGCTGACTGCCAAAGGTaGGTGCTGCTGGGTAGGGGC +
Preference number: 4 (lower is better)
Translates to: SNLLGQWIIQNWQNTQTTADCQR*VLLGRG
Trigger: GCCCCTACCCAGCAGCACCCACCTTTGGCAGTCAGC...AGTGGTTTGAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp GTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATGACCTGAATAGGGCTTaGGATGGCATCAGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: VLGPLQLERKLVPLPDLNDLNRA*DGIRVQ
Trigger: CTGGACCCTGATGCCATCCCAAGCCCTATTCAGGTC...ATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTATTGACTAAGGGTGGCACCTaGCCCCGTACTCCAGTAACA +
Preference number: 4 (lower is better)
Translates to: SVSRGSSEWDVNWLCEVLTKGGT*PRTPVT
Trigger: TGTTACTGGAGTACGGGGCCAGGTGCCACCCTTAGT...CAATACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp GAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCGGACTTGCATTCCCTTaGTCTTTCACCAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: EPSSVGASPAGKEAGTSTGLAFP*SFTRKL
Trigger: CAACTTCCTGGTGAAAGACCAAGGGAATGCAAGTCC...GGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTAGGGCCAGATTCCCCATaGTCCACAACATACGGTGAA +
Preference number: 4 (lower is better)
Translates to: SSVSRGSSEWDVNWLCEVGPDSP*STTYGE
Trigger: TTCACCGTATGTTGTGGACCATGGGGAATCTGGCCC...TACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTGCCTCCATTCCAGCCTaGATAACTGGTACAAATACT +
Preference number: 4 (lower is better)
Translates to: PLSQYQSPSGVPAGENGAASIPA*ITGTNT
Trigger: AGTATTTGTACCAGTTATCCAGGCTGGAATGGAGGC...AGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTATTGGTTCTTCAGTTTCCCTaGGGCCTCTGCAATGGGCAG +
Preference number: 4 (lower is better)
Translates to: SVSRGSSEWDVNWLCEVLVLQFP*GLCNGQ
Trigger: CTGCCCATTGCAGAGGCCCCAGGGAAACTGAAGAAC...CAATACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGTTCTTCAGTTTCCCTaGGGCCTCTGCAATGGGCAG +
Preference number: 4 (lower is better)
Translates to: KITVSHSVNTKAQAVSQQVLQFP*GLCNGQ
Trigger: CTGCCCATTGCAGAGGCCCCAGGGAAACTGAAGAAC...CTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp GGTGATGAGCGTGTCACGAACAGCCTTCACAGGGCTATTCAGGACTCCCCGATAGCACAACAGAGAGTGTaGCCACATCCACATACTGGT +
Preference number: 4 (lower is better)
Translates to: GDERVTNSLHRAIQDSPIAQQRV*PHPHTG
Trigger: ACCAGTATGTGGATGTGGCCACACTCTCTGTTGTGC...TATCGGGGAGTCCTGAATAGCCCTGTGAAGGCTGTTCGTGACACGCTCATCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp ATGAGGCCTCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCTTCAGGGCCAGATTATaGATGCGGAGCCGACGCTGC +
Preference number: 4 (lower is better)
Translates to: MRPRTFLDSGLSRTGRTLFRARL*MRSRRC
Trigger: GCAGCGTCGGCTCCGCATCCATAATCTGGCCCTGAA...GAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CCA 90 bp CCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCTCCAAACCCCCAATACCAGAGGCTCGAACTGCTaGTGGTTCGGTAGTACTCTC +
Preference number: 4 (lower is better)
Translates to: PKGHIILPGSGCLQTPNTRGSNC*WFGSTL
Trigger: GAGAGTACTACCGAACCACCAGCAGTTCGAGCCTCT...GGTATTGGGGGTTTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AGAAACTTGACTGCTAACCTCCAGGCCCAAGAAGGACTGACCACTTTTCTCTCCTGGACAACACCCTGTTaGACGCTTGCTCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: RNLTANLQAQEGLTTFLSWTTPC*TLAPTQ
Trigger: CTGGGTGGGAGCAAGCGTCCAACAGGGTGTTGTCCA...GGAGAGAAAAGTGGTCAGTCCTTCTTGGGCCTGGAGGTTAGCAGTCAAGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AGGGTCTGGGTGCCTCCAAACCCCCAATACCGAATCATATACAGTGAACTGAGATGGACAACACCCTGTTaGACGCTTGCTCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: RVWVPPNPQYRIIYSELRWTTPC*TLAPTQ
Trigger: CTGGGTGGGAGCAAGCGTCCAACAGGGTGTTGTCCA...TCTCAGTTCACTGTATATGATTCGGTATTGGGGGTTTGGAGGCACCCAGACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTACGCTGAAAAGGCTCTaGACAACACCCTGTTGGACG +
Preference number: 4 (lower is better)
Translates to: LTTFLSTTYGLYPSSCAPTLKRL*TTPCWT
Trigger: CGTCCAACAGGGTGTTGTCCAGAGCCTTTTCAGCGT...AGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AGAAGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGACGCTGAAAAGGCTCTaGACAACACCCTGTTGGACG +
Preference number: 4 (lower is better)
Translates to: RSSVSRGSSEWDVNWLCETLKRL*TTPCWT
Trigger: CGTCCAACAGGGTGTTGTCCAGAGCCTTTTCAGCGT...CTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCTCCAATTCTGGAAGCTAGCCTaGGCCCTATGCCATTTACCC +
Preference number: 4 (lower is better)
Translates to: WETGPKGHIILPGSGCLQFWKLA*ALCHLP
Trigger: GGGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAA...TTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTAAATATTGCCAGGGTCTaGGTGCCTCCAAACCCCCAA +
Preference number: 4 (lower is better)
Translates to: SSVSRGSSEWDVNWLCEVNIARV*VPPNPQ
Trigger: TTGGGGGTTTGGAGGCACCCAGACCCTGGCAATATT...TACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp GCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAATGGGGCCTCTCCAGCTaGAAAGGAAGCTGGTACCTC +
Preference number: 4 (lower is better)
Translates to: ASWGWKITVSHSVNTKAQWGLSS*KGSWYL
Trigger: GAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCA...TTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TCTGACATCCTGGGGTGCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCAAGCAGTGTTTCTCGTaGGAGCTCAGAGTGGGATGT +
Preference number: 4 (lower is better)
Translates to: SDILGCFLEASLGPMPFTKQCFS*ELRVGC
Trigger: ACATCCCACTCTGAGCTCCCACGAGAAACACTGCTT...GGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CAGAGTGGCAGGATACTTGAGCCCAGAAAGAAGGTGTCTCCTTATATCTCCCCCCAACAACCCCGGGCCTaGAGAAGCAGTGTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: QSGRILEPRKKVSPYISPQQPRA*RSSVSR
Trigger: ACGAGAAACACTGCTTCTCCAGGCCCGGGGTTGTTG...GGGGGAGATATAAGGAGACACCTTCTTTCTGGGCTCAAGTATCCTGCCACTCTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CCTCCAAACCCCCAATACCGAATCATATACAGTGAACTGAGAAGCTACATTCATAGGAGCCTGTGCTGTTaGGGCTGGAGGTGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: PPNPQYRIIYSELRSYIHRSLCC*GWRCPR
Trigger: TCGGGGGCACCTCCAGCCTCAACAGCACAGGCTCCT...ATGAATGTAGCTTCTCAGTTCACTGTATATGATTCGGTATTGGGGGTTTGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp TGCCATTTACCCACTTGCTTTAGCTCAGTAGCTGCCGAATCTCCTTGTGCATATGGGCCACAGCACCGCTaGTCTGCATTCCAGACAGCT +
Preference number: 4 (lower is better)
Translates to: CHLPTCFSSVAAESPCAYGPQHR*SAFQTA
Trigger: AGCTGTCTGGAATGCAGATCAGCGGTGCTGTGGCCC...ATATGCACAAGGAGATTCGGCAGCTACTGAGCTAAAGCAAGTGGGTAAATGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR TCA 90 bp AGAAACTTGACTGCTAACCTCCAGGCCCAAGAAGGACTGACCACTTTTCTCTCCCAGAGCTTGAGGAGGTaGAGACACATGGTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: RNLTANLQAQEGLTTFLSQSLRR*RHMVGL
Trigger: CAGCCCAACCATGTGTCTTCACCTCCTCAAGCTCTG...GGAGAGAAAAGTGGTCAGTCCTTCTTGGGCCTGGAGGTTAGCAGTCAAGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp TGCTTTAGCTCAGTAGCTGCCGAATCTCCTTGTGCATATGACAGAGAAAGTCCACCAGGGGGCAGAGCTTaGGGAGGTGAAGACACATGG +
Preference number: 4 (lower is better)
Translates to: CFSSVAAESPCAYDRESPPGGRA*GGEDTW
Trigger: CCATGTGTCTTCACCTCCTCAAGCTCTGCCCCCTGG...TGGACTTTCTCTGTCATATGCACAAGGAGATTCGGCAGCTACTGAGCTAAAGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR TCA 90 bp TGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCTCCAACTGTCCCAATTTCTCTaGCATCCTGGGGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: WETGPKGHIILPGSGCLQLSQFL*HPGVLS
Trigger: AGAAAGCACCCCAGGATGTCAGAGAAATTGGGACAG...TTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp GCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAATTCTCCGGTCACCTCTaGCAGTGTGCCTCTCTATCC +
Preference number: 4 (lower is better)
Translates to: ASWGWKITVSHSVNTKAQFSGHL*QCASLS
Trigger: GGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAA...TTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp GTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATGCTCAGAGTGGGATGTaGACTGGCTCTGTGAGGTAT +
Preference number: 4 (lower is better)
Translates to: VLGPLQLERKLVPLPDLNAQSGM*TGSVRY
Trigger: ATACCTCACAGAGCCAGTTCACATCCCACTCTGAGC...ATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp AACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAAAGCATTCCCAATTTaGTCTCACCCGGCTCCAGAT +
Preference number: 4 (lower is better)
Translates to: NCQPLSQYQSPSGVPAGEKAFPI*SHPAPD
Trigger: ATCTGGAGCCGGGTGAGATCAAATTGGGAATGCTTT...CTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CAAGAAGGACTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTTATGGTAAGGCACTCTaGGTTCAGTCAAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: QEGLTTFLSTTYGLYPSSYGKAL*VQSRWG
Trigger: GCCCCACCTTGACTGAACTCAGAGTGCCTTACCATA...AGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAGTCCTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000465076.5
CDS-3UTR GCA 90 bp AAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGTGCATTCCAGACAGCTaGGTAGCCACCTGTGCACTT +
Preference number: 4 (lower is better)
Translates to: KITVSHSVNTKAQAVSQQCIPDS*VATCAL
Trigger: AAGTGCACAGGTGGCTACGCAGCTGTCTGGAATGCA...CTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGGACACATGTATGCTTTaGAGCGGTTGCAGCGCAAAG +
Preference number: 4 (lower is better)
Translates to: LLLGDWSKGTHNIARVWVDTCML*SGCSAK
Trigger: CTTTGCGCTGCAACCGCTGCAAAGCATACATGTGTC...CACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp GAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCCCACATCTGTCGTGTTaGTCATGTAGAAAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: EPSSVGASPAGKEAGTSTPHLSC*SCRKLQ
Trigger: TTGGAGCTTTCTACATGAGCAACACGACAGATGTGG...GGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp TCTGACATCCTGGGGTGCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCCAGGACTCCCCGATATaGAAACTTGGCCATGTAGTT +
Preference number: 4 (lower is better)
Translates to: SDILGCFLEASLGPMPFTQDSPI*KLGHVV
Trigger: AACTACATGGCCAAGTTTGCATATCGGGGAGTCCTG...GGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000635550.1
CDS-3UTR GCA 90 bp GGTAGAATGAGGGAACAGGGGCACCTTCCATCAGCAGGACATGACAGAGTGGCACTGGGAGTAGCTTCATaGACTCAGGAAGGATCAACT +
Preference number: 4 (lower is better)
Translates to: GRMREQGHLPSAGHDRVALGVAS*TQEGST
Trigger: AGTTGATCCTTCCTGAGTGCATGAAGCTACTCCCAG...TGCCACTCTGTCATGTCCTGCTGATGGAAGGTGCCCCTGTTCCCTCATTCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp TCCTGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGTTCAGAGGCTCGAACTaGTGGTGGTTCGGTAGTACT +
Preference number: 4 (lower is better)
Translates to: SCLPLSSWETGPKGHIILFRGSN*WWFGST
Trigger: AGTACTACCGAACCACCAGCAGTTCGAGCCTCTGAA...CAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTATATGTTTTATCCCTAACCCTGTTGGACGCTTaGTCCCACCCAGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PPPMGYTPALVHLYVLSLTLLDA*SHPEEE
Trigger: CTCTTCCTCTGGGTGGGAGCAAGCGTCCAACAGGGT...TAGGGATAAAACATATAGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp GGTAGAATGAGGGAACAGGGGCACCTTCCATCAGCAGGACATGACAGAGTGGCATCTTCCACCAGGAAGTaGTTGAACAGCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: GRMREQGHLPSAGHDRVASSTRK*LNSISI
Trigger: GATGGAGATGCTGTTCAAGCACTTCCTGGTGGAAGA...TGCCACTCTGTCATGTCCTGCTGATGGAAGGTGCCCCTGTTCCCTCATTCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp TCCTGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCTAGCCTGGGCCCTATaGCATTTACCCACTTGCTTT +
Preference number: 4 (lower is better)
Translates to: SCLPLSSWETGPKGHIILLAWAL*HLPTCF
Trigger: AAAGCAAGTGGGTAAATGGCATAGGGCCCAGGCTAG...CAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCTCCAAACCCCCAATACCGTGATCATCAATCATTaGAGGAGAGAGCGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: PKGHIILPGSGCLQTPNTVIINH*RRERAS
Trigger: GCTCGCTCGCTCTCTCCTGCAATGATTGATGATCAC...GGTATTGGGGGTTTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp AGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTATTGTCACCTCTGACAGTGTaGCTCTCTATCCACGGAGTG +
Preference number: 4 (lower is better)
Translates to: SVSRGSSEWDVNWLCEVLSPLTV*LSIHGV
Trigger: CACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGA...CAATACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp AGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATCCACGGAGTGATCATCAATCACCTCTGACAGTGTaGCTCTCTATCCACGGAGTG +
Preference number: 4 (lower is better)
Translates to: SSPVTSDSVPLYPRSDHQSPLTV*LSIHGV
Trigger: CACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGA...TTGATGATCACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp TGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGCTCTGTGAGGTATTaGAAGTTGATGACCAGGCTC +
Preference number: 4 (lower is better)
Translates to: CLPLSSWETGPKGHIILPGSVRY*KLMTRL
Trigger: GAGCCTGGTCATCAACTTGCAATACCTCACAGAGCC...TGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTAATTGCCCACCATAGCTaGACTGATGATACCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SSVSRGSSEWDVNWLCEVIAHHS*TDDTLG
Trigger: ACCCAGGGTATCATCAGTCCAGCTATGGTGGGCAAT...TACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCTGAACAGTGGAGCTTaGCCCATTCTGTACATCTCC +
Preference number: 4 (lower is better)
Translates to: LLLGDWSKGTHNIARVWVLNSGA*PILYIS
Trigger: GGAGATGTACAGAATGGGCCAAGCTCCACTGTTCAG...CACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TATAGGATGTACATCGGATGTATCGGGGACTTGCATTCCCTTGGTCTTTCACCAGACACATGGTTGGGCTaGCTCACTGAGGGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: YRMYIGCIGDLHSLGLSPDTWLG*LTEGPP
Trigger: TGGAGGGCCCTCAGTGAGCCAGCCCAACCATGTGTC...TGGTGAAAGACCAAGGGAATGCAAGTCCCCGATACATCCGATGTACATCCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp TGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATGTGAAGACACATGGTTaGGCTGGCTCACTGAGGGCC +
Preference number: 4 (lower is better)
Translates to: WGLSSWKGSWYLYQILIYVKTHG*AGSLRA
Trigger: GGCCCTCAGTGAGCCAGCCCAACCATGTGTCTTCAC...ATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AGAAACTTGACTGCTAACCTCCAGGCCCAAGAAGGACTGACCACTTTTCTCTCCGACCTGAATAGGGCTTaGGATGGCATCAGGGTCCAG +
Preference number: 4 (lower is better)
Translates to: RNLTANLQAQEGLTTFLSDLNRA*DGIRVQ
Trigger: CTGGACCCTGATGCCATCCCAAGCCCTATTCAGGTC...GGAGAGAAAAGTGGTCAGTCCTTCTTGGGCCTGGAGGTTAGCAGTCAAGTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AGGGTCTGGGTGCCTCCAAACCCCCAATACCGAATCATATACAGTGAACTGAGAACTAAGGGTGGCACCTaGCCCCGTACTCCAGTAACA +
Preference number: 4 (lower is better)
Translates to: RVWVPPNPQYRIIYSELRTKGGT*PRTPVT
Trigger: TGTTACTGGAGTACGGGGCCAGGTGCCACCCTTAGT...TCTCAGTTCACTGTATATGATTCGGTATTGGGGGTTTGGAGGCACCCAGACCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCTCCAACTGCAAAAACAGCACTaGAAACGCCTCCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: WETGPKGHIILPGSGCLQLQKQH*KRLPPS
Trigger: TGAAGGAGGGAGGCGTTTCCAGTGCTGTTTTTGCAG...TTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATCCACGGAGTGATCATCAACTGGGGCCTCTGCAATaGGCAGGGATGTATGGAATA +
Preference number: 4 (lower is better)
Translates to: SSPVTSDSVPLYPRSDHQLGPLQ*AGMYGI
Trigger: TATTCCATACATCCCTGCCCATTGCAGAGGCCCCAG...TTGATGATCACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp GAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCGCCACATCCACATACTaGTTAGGGAAGAGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: EPSSVGASPAGKEAGTSTATSTY*LGKRKR
Trigger: TCTCTTTCTCTTCCCTAACCAGTATGTGGATGTGGC...GGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTGCACAACAGAGAGTGTaGCCACATCCACATACTGGT +
Preference number: 4 (lower is better)
Translates to: LTTFLSTTYGLYPSSCAPAQQRV*PHPHTG
Trigger: ACCAGTATGTGGATGTGGCCACACTCTCTGTTGTGC...AGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTATATGTTTTATCCCTATTCAGGGCCAGATTATaGATGCGGAGCCGACGCTGC +
Preference number: 4 (lower is better)
Translates to: PPPMGYTPALVHLYVLSLFRARL*MRSRRC
Trigger: GCAGCGTCGGCTCCGCATCCATAATCTGGCCCTGAA...TAGGGATAAAACATATAGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATCCACGGAGTGATCATCAAGGCTCGAACTGCTGGTaGTTCGGTAGTACTCTCAAC +
Preference number: 4 (lower is better)
Translates to: SSPVTSDSVPLYPRSDHQGSNCW*FGSTLN
Trigger: GTTGAGAGTACTACCGAACCACCAGCAGTTCGAGCC...TTGATGATCACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CAAGAAGGACTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTGGCTCGAACTGCTGGTaGTTCGGTAGTACTCTCAAC +
Preference number: 4 (lower is better)
Translates to: QEGLTTFLSTTYGLYPSSGSNCW*FGSTLN
Trigger: GTTGAGAGTACTACCGAACCACCAGCAGTTCGAGCC...AGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAGTCCTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CAAGAAGGACTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTAGAGGCTCGAACTGCTaGTGGTTCGGTAGTACTCTC +
Preference number: 4 (lower is better)
Translates to: QEGLTTFLSTTYGLYPSSRGSNC*WFGSTL
Trigger: GAGAGTACTACCGAACCACCAGCAGTTCGAGCCTCT...AGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAGTCCTTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TCTGACATCCTGGGGTGCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCGGCCTCGAACCTTCTTaGACAGTGGATTATCCAGAA +
Preference number: 4 (lower is better)
Translates to: SDILGCFLEASLGPMPFTGLEPS*TVDYPE
Trigger: TTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCC...GGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CCA 90 bp GTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATTTCTGGAAGCTAGCCTaGGCCCTATGCCATTTACCC +
Preference number: 4 (lower is better)
Translates to: VLGPLQLERKLVPLPDLNFWKLA*ALCHLP
Trigger: GGGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAA...ATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGTCTCTCCACCACCTATaGGCTATACCCCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: KITVSHSVNTKAQAVSQQSLHHL*AIPQLL
Trigger: CAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGA...CTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp GAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGCTGGAAAGGAAGCTaGTACCTCTACCAGATCTTA +
Preference number: 4 (lower is better)
Translates to: EPSSVGASPAGKEAGTSTSWKGS*YLYQIL
Trigger: TAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCT...GGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TGCATGAAGGGACACATGTATGCTTTGCAGCGGTTGCAGCGCAAAGGGCCAGATGGTCTATTCTGTGCCTaGTTTTCTGCTGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: CMKGHMYALQRLQRKGPDGLFCA*FSAEEA
Trigger: TGCCTCCTCAGCAGAAAACCAGGCACAGAATAGACC...ATCTGGCCCTTTGCGCTGCAACCGCTGCAAAGCATACATGTGTCCCTTCATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp GAGGAGGTGAAGACACATGGTTGGGCTGGCTCACTGAGGGCCCTCCAAAACTCTTTCAATGACCTGAATTaGACTAGGAATGGCATCGGG +
Preference number: 4 (lower is better)
Translates to: EEVKTHGWAGSLRALQNSFNDLN*TRNGIG
Trigger: CCCGATGCCATTCCTAGTCCAATTCAGGTCATTGAA...AGAGTTTTGGAGGGCCCTCAGTGAGCCAGCCCAACCATGTGTCTTCACCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR TCA 90 bp TCCTGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGTGGCACAGGTGGAACTaGCTGGTTGACGTTCATTAT +
Preference number: 4 (lower is better)
Translates to: SCLPLSSWETGPKGHIILWHRWN*LVDVHY
Trigger: ATAATGAACGTCAACCAGTCAGTTCCACCTGTGCCA...CAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTTTGCGTCTGGATCCCAGGATaGCCTTGGGCCTGGCTAAGG +
Preference number: 4 (lower is better)
Translates to: PLQLERKLVPLPDLNIFCVWIPG*PWAWLR
Trigger: CCTTAGCCAGGCCCAAGGTCATCCTGGGATCCAGAC...GCAAAATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CAGATGTGCAAGGGATATTATAGGATGTACATCGGATGTATCGGGGACTTGCATCCAGGGGGCAGAGCTTaGGGAGGTGAAGACACATGG +
Preference number: 4 (lower is better)
Translates to: QMCKGYYRMYIGCIGDLHPGGRA*GGEDTW
Trigger: CCATGTGTCTTCACCTCCTCAAGCTCTGCCCCCTGG...ATGCAAGTCCCCGATACATCCGATGTACATCCTATAATATCCCTTGCACATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR TCA 90 bp CCTCCAAACCCCCAATACCGAATCATATACAGTGAACTGAGAAGCTACATTCATGCCAACGCGGATTGCTaGCTCTTCTGCCCCACCCTC +
Preference number: 4 (lower is better)
Translates to: PPNPQYRIIYSELRSYIHANADC*LFCPTL
Trigger: GAGGGTGGGGCAGAAGAGTCAGCAATCCGCGTTGGC...ATGAATGTAGCTTCTCAGTTCACTGTATATGATTCGGTATTGGGGGTTTGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp AAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGCACCTTATTGTAGGTaGCAAAGCCAACGCGGATTG +
Preference number: 4 (lower is better)
Translates to: KITVSHSVNTKAQAVSQQAPYCR*QSQRGL
Trigger: CAATCCGCGTTGGCTTTGTCACCTACAATAAGGTGC...CTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp AGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTATTGGCCGATCGTCATGCTTaGACTCCACAGTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: SVSRGSSEWDVNWLCEVLADRHA*TPQSLF
Trigger: AAACAGTGACTGTGGAGTTCAAGCATGACGATCGGC...CAATACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp TGGAAGCTAGCCTGGGCCCTATGCCATTTACCCACTTGCTTTAGCTCAGTAGCTCTGTCCCAATTTCTCTaGCATCCTGGGGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: WKLAWALCHLPTCFSSVALSQFL*HPGVLS
Trigger: AGAAAGCACCCCAGGATGTCAGAGAAATTGGGACAG...AGCTACTGAGCTAAAGCAAGTGGGTAAATGGCATAGGGCCCAGGCTAGCTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR TCA 90 bp GCAGGGATGTATGGAATAGAAAGAGCTTCCCTGCACACTCAGCAGCCTTCAGAGCTGTCCCAATTTCTCTaGCATCCTGGGGTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: AGMYGIERASLHTQQPSELSQFL*HPGVLS
Trigger: AGAAAGCACCCCAGGATGTCAGAGAAATTGGGACAG...CTCTGAAGGCTGCTGAGTGTGCAGGGAAGCTCTTTCTATTCCATACATCCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR TCA 90 bp GCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAAGGCCCAAGAAGGACTaGCCACTTTTCTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: ASWGWKITVSHSVNTKAQRPKKD*PLFSPP
Trigger: TGGTGGAGAGAAAAGTGGTCAGTCCTTCTTGGGCCT...TTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp ATGAGGCCTCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCCACCCATATTCTCCTTaGCTCCCTGCCCTCACCAAA +
Preference number: 4 (lower is better)
Translates to: MRPRTFLDSGLSRTGRTLHPYSP*LPALTK
Trigger: TTTGGTGAGGGCAGGGAGTCAAGGAGAATATGGGTG...GAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCCTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465076.5
CDS-3UTR GCA 90 bp ATGAGGCCTCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCACAGCACCGCTGATCTaGATTCCAGACAGCTGCGTA +
Preference number: 4 (lower is better)
Translates to: MRPRTFLDSGLSRTGRTLTAPLI*IPDSCV
Trigger: TACGCAGCTGTCTGGAATGCAGATCAGCGGTGCTGT...GAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCCTCAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR GCA 90 bp CCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTTTGCGCCAAAGGTGGGTGCTaGTGGGTAGGGGCCTCCATA +
Preference number: 4 (lower is better)
Translates to: PLQLERKLVPLPDLNIFCAKGGC*WVGASI
Trigger: TATGGAGGCCCCTACCCAGCAGCACCCACCTTTGGC...GCAAAATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp GCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAATGCTTTGCAGCGGTTaGAGCGCAAAGGGCCAGATT +
Preference number: 4 (lower is better)
Translates to: ASWGWKITVSHSVNTKAQMLCSG*SAKGQI
Trigger: AATCTGGCCCTTTGCGCTGCAACCGCTGCAAAGCAT...TTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp AGAAACTTGACTGCTAACCTCCAGGCCCAAGAAGGACTGACCACTTTTCTCTCCGAAGGGACACATGTATaGTTTGCAGCGGTTGCAGCG +
Preference number: 4 (lower is better)
Translates to: RNLTANLQAQEGLTTFLSEGTHV*FAAVAA
Trigger: CGCTGCAACCGCTGCAAAGCATACATGTGTCCCTTC...GGAGAGAAAAGTGGTCAGTCCTTCTTGGGCCTGGAGGTTAGCAGTCAAGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CAGAGTGGCAGGATACTTGAGCCCAGAAAGAAGGTGTCTCCTTATATCTCCCCCAAGCATCCACACGTTTaGCGGTATGATCCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: QSGRILEPRKKVSPYISPKHPHV*RYDPGA
Trigger: AGCACCTGGATCATACCGGCAAACGTGTGGATGCTT...GGGGGAGATATAAGGAGACACCTTCTTTCTGGGCTCAAGTATCCTGCCACTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTGGAACTTATTGTTCTTaGAGTAATCTACAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: PLSQYQSPSGVPAGENGAGTYCS*SNLQWP
Trigger: TGGCCACTGTAGATTACTGCAAGAACAATAAGTTCC...AGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp TGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCTCCAATTGAGCCGATCGTCATaGTTGAACTCCACAGTCACT +
Preference number: 4 (lower is better)
Translates to: WETGPKGHIILPGSGCLQLSRSS*LNSTVT
Trigger: AGTGACTGTGGAGTTCAAGCATGACGATCGGCTCAA...TTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTTTGAGCCGATCGTCATaGTTGAACTCCACAGTCACT +
Preference number: 4 (lower is better)
Translates to: LTTFLSTTYGLYPSSCAPLSRSS*LNSTVT
Trigger: AGTGACTGTGGAGTTCAAGCATGACGATCGGCTCAA...AGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp TTCCCTGGGGCCTCTGCAATGGGCAGGGATGTATGGAATAGAAAGAGCTTCCCTCAGGACTCCCCGATATaGAAACTTGGCCATGTAGTT +
Preference number: 4 (lower is better)
Translates to: FPGASAMGRDVWNRKSFPQDSPI*KLGHVV
Trigger: AACTACATGGCCAAGTTTGCATATCGGGGAGTCCTG...AGGGAAGCTCTTTCTATTCCATACATCCCTGCCCATTGCAGAGGCCCCAGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp AAGGATCAACTGTCCTGCAGAGGAGGGGCTAGCACAGTTCTTTCTGTAACAGGCTTCAGAGGCTCGAACTaGTGGTGGTTCGGTAGTACT +
Preference number: 4 (lower is better)
Translates to: KDQLSCRGGASTVLSVTGFRGSN*WWFGST
Trigger: AGTACTACCGAACCACCAGCAGTTCGAGCCTCTGAA...GCCTGTTACAGAAAGAACTGTGCTAGCCCCTCCTCTGCAGGACAGTTGATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp TCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCAAACCACTACCCTGTTGGACGCTTaGTCCCACCCAGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SNLLGQWIIQNWQNTQTTTLLDA*SHPEEE
Trigger: CTCTTCCTCTGGGTGGGAGCAAGCGTCCAACAGGGT...AGTGGTTTGAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp GGTGATGAGCGTGTCACGAACAGCCTTCACAGGGCTATTCAGGACTCCCCGATAAAAGTCCACATAAGATaGTCCCCCACTCAGACTCTT +
Preference number: 4 (lower is better)
Translates to: GDERVTNSLHRAIQDSPIKVHIR*SPTQTL
Trigger: AAGAGTCTGAGTGGGGGAGCATCTTATGTGGACTTT...TATCGGGGAGTCCTGAATAGCCCTGTGAAGGCTGTTCGTGACACGCTCATCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp AGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATCCACGGAGTGATCATCAATGTTTGCTGATAGCCTaGTACTGGGCCATTGTAGGC +
Preference number: 4 (lower is better)
Translates to: SSPVTSDSVPLYPRSDHQCLLIA*YWAIVG
Trigger: GCCTACAATGGCCCAGTACCAGGCTATCAGCAAACA...TTGATGATCACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTATATGTTTTATCCCTATCTCCTTGGCCAAACTaGCCATATGCAGCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PPPMGYTPALVHLYVLSLSPWPN*PYAAWP
Trigger: TGGCCAGGCTGCATATGGCCAGTTTGGCCAAGGAGA...TAGGGATAAAACATATAGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTTTCTGTACATCTCCTTaGCCAAACTGGCCATATGCA +
Preference number: 4 (lower is better)
Translates to: LQNHPVLGPLQLERKLVPFCTSP*PNWPYA
Trigger: TGCATATGGCCAGTTTGGCCAAGGAGATGTACAGAA...AGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TCTGACATCCTGGGGTGCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCTTTGCATCTGAACAGTaGAGCTTGGCCCATTCTGTA +
Preference number: 4 (lower is better)
Translates to: SDILGCFLEASLGPMPFTFASEQ*SLAHSV
Trigger: TACAGAATGGGCCAAGCTCCACTGTTCAGATGCAAA...GGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTTTGCGATGGGGCAGATCGCTaGGGAGTCTGGATCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PLQLERKLVPLPDLNIFCDGADR*GVWIPG
Trigger: TCCTGGGATCCAGACTCCCCAGCGATCTGCCCCATC...GCAAAATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATGGAGGTGAAGACACATaGTTGGGCTGGCTCACTGAG +
Preference number: 4 (lower is better)
Translates to: WGLSSWKGSWYLYQILIYGGEDT*LGWLTE
Trigger: CTCAGTGAGCCAGCCCAACCATGTGTCTTCACCTCC...ATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTATATGTTTTATCCCTAGGAGGTGAAGACACATaGTTGGGCTGGCTCACTGAG +
Preference number: 4 (lower is better)
Translates to: PPPMGYTPALVHLYVLSLGGEDT*LGWLTE
Trigger: CTCAGTGAGCCAGCCCAACCATGTGTCTTCACCTCC...TAGGGATAAAACATATAGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATACTAAGGGTGGCACCTaGCCCCGTACTCCAGTAACA +
Preference number: 4 (lower is better)
Translates to: WGLSSWKGSWYLYQILIYTKGGT*PRTPVT
Trigger: TGTTACTGGAGTACGGGGCCAGGTGCCACCCTTAGT...ATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TGTCTGAGGCTGGAACAGAGTCTTCTCCTTGTCTGTATTGATCAGCTTCCTGTCACTAAGGGTGGCACCTaGCCCCGTACTCCAGTAACA +
Preference number: 4 (lower is better)
Translates to: CLRLEQSLLLVCIDQLPVTKGGT*PRTPVT
Trigger: TGTTACTGGAGTACGGGGCCAGGTGCCACCCTTAGT...GACAGGAAGCTGATCAATACAGACAAGGAGAAGACTCTGTTCCAGCCTCAGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp CTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTGGACTTGCATTCCCTTaGTCTTTCACCAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LTTFLSTTYGLYPSSCAPGLAFP*SFTRKL
Trigger: CAACTTCCTGGTGAAAGACCAAGGGAATGCAAGTCC...AGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGACTTGCATTCCCTTaGTCTTTCACCAGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: CLPLSSWETGPKGHIILPGLAFP*SFTRKL
Trigger: CAACTTCCTGGTGAAAGACCAAGGGAATGCAAGTCC...TGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AGAAACTTGACTGCTAACCTCCAGGCCCAAGAAGGACTGACCACTTTTCTCTCCGGGCCAGATTCCCCATaGTCCACAACATACGGTGAA +
Preference number: 4 (lower is better)
Translates to: RNLTANLQAQEGLTTFLSGPDSP*STTYGE
Trigger: TTCACCGTATGTTGTGGACCATGGGGAATCTGGCCC...GGAGAGAAAAGTGGTCAGTCCTTCTTGGGCCTGGAGGTTAGCAGTCAAGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTATCAATGAGGCCTCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGATCTACACAGCAGCCTTaGGCCACACACTCTTTGGCC +
Preference number: 4 (lower is better)
Translates to: LSMRPRTFLDSGLSRTGRSTQQP*ATHSLA
Trigger: GGCCAAAGAGTGTGTGGCCCAAGGCTGCTGTGTAGA...TCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCCTCATTGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CCA 90 bp TACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCGCCACATCCACATACTaGTTAGGGAAGAGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: YRTIQCWGLSSWKGSWYLATSTY*LGKRKR
Trigger: TCTCTTTCTCTTCCCTAACCAGTATGTGGATGTGGC...GAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CAAGAAGGACTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTGCACAACAGAGAGTGTaGCCACATCCACATACTGGT +
Preference number: 4 (lower is better)
Translates to: QEGLTTFLSTTYGLYPSSAQQRV*PHPHTG
Trigger: ACCAGTATGTGGATGTGGCCACACTCTCTGTTGTGC...AGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAGTCCTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp ATGAGGCCTCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCAGAGGCTCGAACTGCTaGTGGTTCGGTAGTACTCTC +
Preference number: 4 (lower is better)
Translates to: MRPRTFLDSGLSRTGRTLRGSNC*WFGSTL
Trigger: GAGAGTACTACCGAACCACCAGCAGTTCGAGCCTCT...GAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCCTCAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CCA 90 bp TGCCATTTACCCACTTGCTTTAGCTCAGTAGCTGCCGAATCTCCTTGTGCATATTGGACAACACCCTGTTaGACGCTTGCTCCCACCCAG +
Preference number: 4 (lower is better)
Translates to: CHLPTCFSSVAAESPCAYWTTPC*TLAPTQ
Trigger: CTGGGTGGGAGCAAGCGTCCAACAGGGTGTTGTCCA...ATATGCACAAGGAGATTCGGCAGCTACTGAGCTAAAGCAAGTGGGTAAATGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CCA 90 bp CTCCCTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTTGGATTATCCAGAACTaGCAGAACACTCAAACCACT +
Preference number: 4 (lower is better)
Translates to: LPTEPSSVGASPAGKEAGWIIQN*QNTQTT
Trigger: AGTGGTTTGAGTGTTCTGCCAGTTCTGGATAATCCA...ACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339365.2
ENST00000345254.9
CDS-3UTR CCA 90 bp CTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGGGCCTCGAACCTTCTTaGACAGTGGATTATCCAGAA +
Preference number: 4 (lower is better)
Translates to: LLLGDWSKGTHNIARVWVGLEPS*TVDYPE
Trigger: TTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCC...CACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTTGTGCATATGACAGAGAAAGTCCACATAAGATGCTCCCCCACTCAGACTCTTTCCTGGGGTGCTTTCTaGAAGCTAGCCTGGGCCCTA +
Preference number: 4 (lower is better)
Translates to: LVHMTEKVHIRCSPTQTLSWGAF*KLAWAL
Trigger: TAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGA...AAGAGTCTGAGTGGGGGAGCATCTTATGTGGACTTTCTCTGTCATATGCACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR TCA 90 bp AGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTATTGTGGCACAGGTGGAACTaGCTGGTTGACGTTCATTAT +
Preference number: 4 (lower is better)
Translates to: SVSRGSSEWDVNWLCEVLWHRWN*LVDVHY
Trigger: ATAATGAACGTCAACCAGTCAGTTCCACCTGTGCCA...CAATACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CCTCCAAACCCCCAATACCGAATCATATACAGTGAACTGAGAAGCTACATTCATGTTGGGCTGGCTCACTaGGGGCCCTCCAAAACTCTG +
Preference number: 4 (lower is better)
Translates to: PPNPQYRIIYSELRSYIHVGLAH*GPSKTL
Trigger: CAGAGTTTTGGAGGGCCCTCAGTGAGCCAGCCCAAC...ATGAATGTAGCTTCTCAGTTCACTGTATATGATTCGGTATTGGGGGTTTGGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CTATCAATGAGGCCTCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAAGTCTAACAGTGACTTaGGCTCCTCACAGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: LSMRPRTFLDSGLSRTGRSLTVT*APHRGA
Trigger: GGCTCCTCTGTGAGGAGCTCAAGTCACTGTTAGACT...TCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCCTCATTGATAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR TCA 90 bp AGCCATCCAGCAGTGGCACAAACATGTCAGCCACATCAGACACAACCATCATCTGCCGATCGTCATGCTTaGACTCCACAGTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: SHPAVAQTCQPHQTQPSSADRHA*TPQSLF
Trigger: AAACAGTGACTGTGGAGTTCAAGCATGACGATCGGC...AGATGATGGTTGTGTCTGATGTGGCTGACATGTTTGTGCCACTGCTGGATGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR TCA 90 bp CCCACCCAGAGGAAGAGGTTGAGCCCATTCTCCAGTAAATATATATCCCCATTGAAACCACTGGTGATCTaGCTGAAGGAGGAGACGCTG +
Preference number: 4 (lower is better)
Translates to: PTQRKRLSPFSSKYISPLKPLVI*LKEETL
Trigger: CAGCGTCTCCTCCTTCAGTCAGATCACCAGTGGTTT...CAATGGGGATATATATTTACTGGAGAATGGGCTCAACCTCTTCCTCTGGGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR TCA 90 bp CCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTATATGTTTTATCCCTAAGGCCCAAGAAGGACTaGCCACTTTTCTCTCCACCA +
Preference number: 4 (lower is better)
Translates to: PPPMGYTPALVHLYVLSLRPKKD*PLFSPP
Trigger: TGGTGGAGAGAAAAGTGGTCAGTCCTTCTTGGGCCT...TAGGGATAAAACATATAGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp TGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCTCCAATCTCTATCCACGGAGTaGTCATCAATCATTGCAGGA +
Preference number: 4 (lower is better)
Translates to: WETGPKGHIILPGSGCLQSLSTE*SSIIAG
Trigger: TCCTGCAATGATTGATGATCACTCCGTGGATAGAGA...TTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTATATGTTTTATCCCTAACAGCACCGCTGATCTaGATTCCAGACAGCTGCGTA +
Preference number: 4 (lower is better)
Translates to: PPPMGYTPALVHLYVLSLTAPLI*IPDSCV
Trigger: TACGCAGCTGTCTGGAATGCAGATCAGCGGTGCTGT...TAGGGATAAAACATATAGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CAAGAAGGACTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTTTGAGCCGATCGTCATaGTTGAACTCCACAGTCACT +
Preference number: 4 (lower is better)
Translates to: QEGLTTFLSTTYGLYPSSLSRSS*LNSTVT
Trigger: AGTGACTGTGGAGTTCAAGCATGACGATCGGCTCAA...AGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAGTCCTTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp GTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATCTGGGAGTAGCTTCATaGACTCAGGAAGGATCAACT +
Preference number: 4 (lower is better)
Translates to: VLGPLQLERKLVPLPDLNLGVAS*TQEGST
Trigger: AGTTGATCCTTCCTGAGTGCATGAAGCTACTCCCAG...ATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp TGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCTCCAAAAAGTCCACATAAGATaGTCCCCCACTCAGACTCTT +
Preference number: 4 (lower is better)
Translates to: WETGPKGHIILPGSGCLQKVHIR*SPTQTL
Trigger: AAGAGTCTGAGTGGGGGAGCATCTTATGTGGACTTT...TTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp GCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAACTAGCCTGGGCCCTATaGCATTTACCCACTTGCTTT +
Preference number: 4 (lower is better)
Translates to: ASWGWKITVSHSVNTKAQLAWAL*HLPTCF
Trigger: AAAGCAAGTGGGTAAATGGCATAGGGCCCAGGCTAG...TTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTTTGCTTGCCAGGGTCTGGGTaGCTCCAAACCCCCAATACC +
Preference number: 4 (lower is better)
Translates to: PLQLERKLVPLPDLNIFCLPGSG*LQTPNT
Trigger: GGTATTGGGGGTTTGGAGGCACCCAGACCCTGGCAA...GCAAAATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp AACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGATACCCCAGCTCTTGTaGACCTATATGTTTTATCCC +
Preference number: 4 (lower is better)
Translates to: NCQPLSQYQSPSGVPAGEIPQLL*TYMFYP
Trigger: GGGATAAAACATATAGGTGCACAAGAGCTGGGGTAT...CTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp AGGGTCTGGGTGCCTCCAAACCCCCAATACCGAATCATATACAGTGAACTGAGAGTGATCATCAATCATTaGAGGAGAGAGCGAGCGAGC +
Preference number: 4 (lower is better)
Translates to: RVWVPPNPQYRIIYSELRVIINH*RRERAS
Trigger: GCTCGCTCGCTCTCTCCTGCAATGATTGATGATCAC...TCTCAGTTCACTGTATATGATTCGGTATTGGGGGTTTGGAGGCACCCAGACCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp GCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAATGTTTGCTGATAGCCTaGTACTGGGCCATTGTAGGC +
Preference number: 4 (lower is better)
Translates to: ASWGWKITVSHSVNTKAQCLLIA*YWAIVG
Trigger: GCCTACAATGGCCCAGTACCAGGCTATCAGCAAACA...TTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGTTTGCATCTGAACAGTaGAGCTTGGCCCATTCTGTA +
Preference number: 4 (lower is better)
Translates to: LLLGDWSKGTHNIARVWVFASEQ*SLAHSV
Trigger: TACAGAATGGGCCAAGCTCCACTGTTCAGATGCAAA...CACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AGAAGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGTTTGCATCTGAACAGTaGAGCTTGGCCCATTCTGTA +
Preference number: 4 (lower is better)
Translates to: RSSVSRGSSEWDVNWLCEFASEQ*SLAHSV
Trigger: TACAGAATGGGCCAAGCTCCACTGTTCAGATGCAAA...CTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGTACTCCAGTAACAAATaGCTCTGTACCCCGGTTGTT +
Preference number: 4 (lower is better)
Translates to: LLLGDWSKGTHNIARVWVYSSNK*LCTPVV
Trigger: AACAACCGGGGTACAGAGCCATTTGTTACTGGAGTA...CACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTTACTCCAGTAACAAATaGCTCTGTACCCCGGTTGTT +
Preference number: 4 (lower is better)
Translates to: LTTFLSTTYGLYPSSCAPYSSNK*LCTPVV
Trigger: AACAACCGGGGTACAGAGCCATTTGTTACTGGAGTA...AGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp GCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAACTGCAAAAACAGCACTaGAAACGCCTCCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: ASWGWKITVSHSVNTKAQLQKQH*KRLPPS
Trigger: TGAAGGAGGGAGGCGTTTCCAGTGCTGTTTTTGCAG...TTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTTCCAGCCTGGATAACTaGTACAAATACTGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LQNHPVLGPLQLERKLVPSSLDN*YKYCLC
Trigger: ACAGAGACAGTATTTGTACCAGTTATCCAGGCTGGA...AGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TCCTGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGATGGGCAGGGATGTATaGAATAGAAAGAGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SCLPLSSWETGPKGHIILMGRDV*NRKSFP
Trigger: AGGGAAGCTCTTTCTATTCCATACATCCCTGCCCAT...CAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGCCACATCCACATACTaGTTAGGGAAGAGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: CLPLSSWETGPKGHIILPATSTY*LGKRKR
Trigger: TCTCTTTCTCTTCCCTAACCAGTATGTGGATGTGGC...TGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TTCCCTGGGGCCTCTGCAATGGGCAGGGATGTATGGAATAGAAAGAGCTTCCCTGCCACATCCACATACTaGTTAGGGAAGAGAAAGAGA +
Preference number: 4 (lower is better)
Translates to: FPGASAMGRDVWNRKSFPATSTY*LGKRKR
Trigger: TCTCTTTCTCTTCCCTAACCAGTATGTGGATGTGGC...AGGGAAGCTCTTTCTATTCCATACATCCCTGCCCATTGCAGAGGCCCCAGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp AGGGTCTGGGTGCCTCCAAACCCCCAATACCGAATCATATACAGTGAACTGAGAAAGCCAACAACCTTCTaGACATCACGACGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: RVWVPPNPQYRIIYSELRKPTTF*TSRRRS
Trigger: TGACCTGCGTCGTGATGTCCAGAAGGTTGTTGGCTT...TCTCAGTTCACTGTATATGATTCGGTATTGGGGGTTTGGAGGCACCCAGACCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp GCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAAAGCCAACAACCTTCTaGACATCACGACGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: ASWGWKITVSHSVNTKAQKPTTF*TSRRRS
Trigger: TGACCTGCGTCGTGATGTCCAGAAGGTTGTTGGCTT...TTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TGCTTTAGCTCAGTAGCTGCCGAATCTCCTTGTGCATATGACAGAGAAAGTCCAAGGATCTGGGCACACTaGGTGATGAGCGTGTCACGA +
Preference number: 4 (lower is better)
Translates to: CFSSVAAESPCAYDRESPRIWAH*VMSVSR
Trigger: TCGTGACACGCTCATCACCCAGTGTGCCCAGATCCT...TGGACTTTCTCTGTCATATGCACAAGGAGATTCGGCAGCTACTGAGCTAAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CCA 90 bp TATAGGATGTACATCGGATGTATCGGGGACTTGCATTCCCTTGGTCTTTCACCAAGGATCTGGGCACACTaGGTGATGAGCGTGTCACGA +
Preference number: 4 (lower is better)
Translates to: YRMYIGCIGDLHSLGLSPRIWAH*VMSVSR
Trigger: TCGTGACACGCTCATCACCCAGTGTGCCCAGATCCT...TGGTGAAAGACCAAGGGAATGCAAGTCCCCGATACATCCGATGTACATCCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp CCTGGGGCCTCTGCAATGGGCAGGGATGTATGGAATAGAAAGAGCTTCCCTGCATGGATTATCCAGAACTaGCAGAACACTCAAACCACT +
Preference number: 4 (lower is better)
Translates to: PGASAMGRDVWNRKSFPAWIIQN*QNTQTT
Trigger: AGTGGTTTGAGTGTTCTGCCAGTTCTGGATAATCCA...TGCAGGGAAGCTCTTTCTATTCCATACATCCCTGCCCATTGCAGAGGCCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp AGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTAAACCTTCTTGGACAGTaGATTATCCAGAACTGGCAG +
Preference number: 4 (lower is better)
Translates to: SSVSRGSSEWDVNWLCEVNLLGQ*IIQNWQ
Trigger: CTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTT...TACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TGCATGAAGGGACACATGTATGCTTTGCAGCGGTTGCAGCGCAAAGGGCCAGATAACCTTCTTGGACAGTaGATTATCCAGAACTGGCAG +
Preference number: 4 (lower is better)
Translates to: CMKGHMYALQRLQRKGPDNLLGQ*IIQNWQ
Trigger: CTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTT...ATCTGGCCCTTTGCGCTGCAACCGCTGCAAAGCATACATGTGTCCCTTCATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp CCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTATATGTTTTATCCCTATCTCTCCACCACCTATaGGCTATACCCCAGCTCTTG +
Preference number: 4 (lower is better)
Translates to: PPPMGYTPALVHLYVLSLSLHHL*AIPQLL
Trigger: CAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGA...TAGGGATAAAACATATAGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTAAGCTGGAAAGGAAGCTaGTACCTCTACCAGATCTTA +
Preference number: 4 (lower is better)
Translates to: SSVSRGSSEWDVNWLCEVSWKGS*YLYQIL
Trigger: TAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCT...TACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTTTGCTGGGGCCTCTCCAGCTaGAAAGGAAGCTGGTACCTC +
Preference number: 4 (lower is better)
Translates to: PLQLERKLVPLPDLNIFCWGLSS*KGSWYL
Trigger: GAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCA...GCAAAATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CTTGTGCATATGACAGAGAAAGTCCACATAAGATGCTCCCCCACTCAGACTCTTCAACAACCCCGGGCCTaGAGAAGCAGTGTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: LVHMTEKVHIRCSPTQTLQQPRA*RSSVSR
Trigger: ACGAGAAACACTGCTTCTCCAGGCCCGGGGTTGTTG...AAGAGTCTGAGTGGGGGAGCATCTTATGTGGACTTTCTCTGTCATATGCACAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000465076.5
CDS-3UTR CCA 90 bp TCTGACATCCTGGGGTGCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCTGGATTATCCAGAACTaGCAGAACACTCTAGAACAC +
Preference number: 4 (lower is better)
Translates to: SDILGCFLEASLGPMPFTWIIQN*QNTLEH
Trigger: GTGTTCTAGAGTGTTCTGCCAGTTCTGGATAATCCA...GGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465076.5
3UTR CAA 72 bp AATAAGCTGGTGATAACTGCCCGAGACTCATTGACGTaGACCAGGAAGCCATCCAGCAGTGGCACAAACATG +
Preference number: 4 (lower is better)
Translates to: NKLVITARDSLT*TRKPSSSGTNM
Trigger: CATGTTTGTGCCACTGCTGGATGGCTTCCTGGTCAACGTCAATGAGTCTCGGGCAGTTATCACCAGCTTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR TCA 90 bp TACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCAAAGCATTCCCAATTTaGTCTCACCTTATCAGACAG +
Preference number: 4 (lower is better)
Translates to: YRTIQCWGLSSWKGSWYLKAFPI*SHLIRQ
Trigger: CTGTCTGATAAGGTGAGATCAAATTGGGAATGCTTT...GAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339365.2
CDS-3UTR TCA 90 bp AGGGTCTGGGTGCCTCCAAACCCCCAATACCGAATCATATACAGTGAACTGAGACTGTGGCTGGGCCAATaGGCTCTTCACATTATAGAA +
Preference number: 4 (lower is better)
Translates to: RVWVPPNPQYRIIYSELRLWLGQ*ALHIIE
Trigger: TTCTATAATGTGAAGAGCTCATTGGCCCAGCCACAG...TCTCAGTTCACTGTATATGATTCGGTATTGGGGGTTTGGAGGCACCCAGACCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp TGCCATTTACCCACTTGCTTTAGCTCAGTAGCTGCCGAATCTCCTTGTGCATATCCCGTAAGCTATCAATaGGGCCTCGAACCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: CHLPTCFSSVAAESPCAYPVSYQ*GLEPSW
Trigger: CCAAGAAGGTTCGAGGCCTCATTGATAGCTTACGGG...ATATGCACAAGGAGATTCGGCAGCTACTGAGCTAAAGCAAGTGGGTAAATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR GCA 90 bp TATAGGATGTACATCGGATGTATCGGGGACTTGCATTCCCTTGGTCTTTCACCAACAGCACCGCTGATCTaGATTCCAGACAGCTGCGTA +
Preference number: 4 (lower is better)
Translates to: YRMYIGCIGDLHSLGLSPTAPLI*IPDSCV
Trigger: TACGCAGCTGTCTGGAATGCAGATCAGCGGTGCTGT...TGGTGAAAGACCAAGGGAATGCAAGTCCCCGATACATCCGATGTACATCCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp ATGAGGCCTCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCGATGTATCGGGGACTTaGATTCCCTTGGTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: MRPRTFLDSGLSRTGRTLDVSGT*IPLVFH
Trigger: GTGAAAGACCAAGGGAATGCAAGTCCCCGATACATC...GAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR GCA 90 bp TGTCTGAGGCTGGAACAGAGTCTTCTCCTTGTCTGTATTGATCAGCTTCCTGTCGACACATGTATGCTTTaGAGCGGTTGCAGCGCAAAG +
Preference number: 4 (lower is better)
Translates to: CLRLEQSLLLVCIDQLPVDTCML*SGCSAK
Trigger: CTTTGCGCTGCAACCGCTGCAAAGCATACATGTGTC...GACAGGAAGCTGATCAATACAGACAAGGAGAAGACTCTGTTCCAGCCTCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp CTTGTGCATATGACAGAGAAAGTCCACATAAGATGCTCCCCCACTCAGACTCTTGAAGGGACACATGTATaGTTTGCAGCGGTTGCAGCG +
Preference number: 4 (lower is better)
Translates to: LVHMTEKVHIRCSPTQTLEGTHV*FAAVAA
Trigger: CGCTGCAACCGCTGCAAAGCATACATGTGTCCCTTC...AAGAGTCTGAGTGGGGGAGCATCTTATGTGGACTTTCTCTGTCATATGCACAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR GCA 90 bp TACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCGGAACTTATTGTTCTTaGAGTAATCTACAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: YRTIQCWGLSSWKGSWYLGTYCS*SNLQWP
Trigger: TGGCCACTGTAGATTACTGCAAGAACAATAAGTTCC...GAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp TCTGACATCCTGGGGTGCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCTGTTTCCCTTGTGTCTaGAAACATTTCTGGAATCTG +
Preference number: 4 (lower is better)
Translates to: SDILGCFLEASLGPMPFTCFPCV*KHFWNL
Trigger: CAGATTCCAGAAATGTTTGCAGACACAAGGGAAACA...GGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000635550.1
CDS-3UTR GCA 90 bp AAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGCCACATCTGTCGTGTTaGTCATGTAGAAAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: KITVSHSVNTKAQAVSQQPHLSC*SCRKLQ
Trigger: TTGGAGCTTTCTACATGAGCAACACGACAGATGTGG...CTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp AGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATCCACGGAGTGATCATCAACCACATCTGTCGTGTTaGTCATGTAGAAAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: SSPVTSDSVPLYPRSDHQPHLSC*SCRKLQ
Trigger: TTGGAGCTTTCTACATGAGCAACACGACAGATGTGG...TTGATGATCACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp GTATGGAATAGAAAGAGCTTCCCTGCACACTCAGCAGCCTTCAGAGCCTCCATTTTGAGCCGATCGTCATaGTTGAACTCCACAGTCACT +
Preference number: 4 (lower is better)
Translates to: VWNRKSFPAHSAAFRASILSRSS*LNSTVT
Trigger: AGTGACTGTGGAGTTCAAGCATGACGATCGGCTCAA...AATGGAGGCTCTGAAGGCTGCTGAGTGTGCAGGGAAGCTCTTTCTATTCCATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp AGAAACTTGACTGCTAACCTCCAGGCCCAAGAAGGACTGACCACTTTTCTCTCCCTGGGAGTAGCTTCATaGACTCAGGAAGGATCAACT +
Preference number: 4 (lower is better)
Translates to: RNLTANLQAQEGLTTFLSLGVAS*TQEGST
Trigger: AGTTGATCCTTCCTGAGTGCATGAAGCTACTCCCAG...GGAGAGAAAAGTGGTCAGTCCTTCTTGGGCCTGGAGGTTAGCAGTCAAGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp TCAAAGCCAACAACCTTCTGGACATCACGACGCAGGTCACTCAGGAACCGCTCCAATATATATCCCCATTaGTTAGACGCTCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: SKPTTFWTSRRRSLRNRSNIYPH*LDALQR
Trigger: CCTCTGAAGAGCGTCTAAGCAATGGGGATATATATT...GGAGCGGTTCCTGAGTGACCTGCGTCGTGATGTCCAGAAGGTTGTTGGCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp AGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTATTGAAAGTCCACATAAGATaGTCCCCCACTCAGACTCTT +
Preference number: 4 (lower is better)
Translates to: SVSRGSSEWDVNWLCEVLKVHIR*SPTQTL
Trigger: AAGAGTCTGAGTGGGGGAGCATCTTATGTGGACTTT...CAATACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTATATGTTTTATCCCTACTAGCCTGGGCCCTATaGCATTTACCCACTTGCTTT +
Preference number: 4 (lower is better)
Translates to: PPPMGYTPALVHLYVLSLLAWAL*HLPTCF
Trigger: AAAGCAAGTGGGTAAATGGCATAGGGCCCAGGCTAG...TAGGGATAAAACATATAGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp AGAAGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGATACCCCAGCTCTTGTaGACCTATATGTTTTATCCC +
Preference number: 4 (lower is better)
Translates to: RSSVSRGSSEWDVNWLCEIPQLL*TYMFYP
Trigger: GGGATAAAACATATAGGTGCACAAGAGCTGGGGTAT...CTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTGTTTGCTGATAGCCTaGTACTGGGCCATTGTAGGC +
Preference number: 4 (lower is better)
Translates to: WGLSSWKGSWYLYQILIYCLLIA*YWAIVG
Trigger: GCCTACAATGGCCCAGTACCAGGCTATCAGCAAACA...ATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CAAGAAGGACTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTTTCTGTACATCTCCTTaGCCAAACTGGCCATATGCA +
Preference number: 4 (lower is better)
Translates to: QEGLTTFLSTTYGLYPSSFCTSP*PNWPYA
Trigger: TGCATATGGCCAGTTTGGCCAAGGAGATGTACAGAA...AGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAGTCCTTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATCTGAACAGTGGAGCTTaGCCCATTCTGTACATCTCC +
Preference number: 4 (lower is better)
Translates to: WGLSSWKGSWYLYQILIYLNSGA*PILYIS
Trigger: GGAGATGTACAGAATGGGCCAAGCTCCACTGTTCAG...ATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CAGATGTGCAAGGGATATTATAGGATGTACATCGGATGTATCGGGGACTTGCATGGAGGTGAAGACACATaGTTGGGCTGGCTCACTGAG +
Preference number: 4 (lower is better)
Translates to: QMCKGYYRMYIGCIGDLHGGEDT*LGWLTE
Trigger: CTCAGTGAGCCAGCCCAACCATGTGTCTTCACCTCC...ATGCAAGTCCCCGATACATCCGATGTACATCCTATAATATCCCTTGCACATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp TGCTTTAGCTCAGTAGCTGCCGAATCTCCTTGTGCATATGACAGAGAAAGTCCAAAAGGTGGGTGCTGCTaGGTAGGGGCCTCCATAATT +
Preference number: 4 (lower is better)
Translates to: CFSSVAAESPCAYDRESPKGGCC*VGASII
Trigger: AATTATGGAGGCCCCTACCCAGCAGCACCCACCTTT...TGGACTTTCTCTGTCATATGCACAAGGAGATTCGGCAGCTACTGAGCTAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CCA 90 bp AAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGTACTCCAGTAACAAATaGCTCTGTACCCCGGTTGTT +
Preference number: 4 (lower is better)
Translates to: KITVSHSVNTKAQAVSQQYSSNK*LCTPVV
Trigger: AACAACCGGGGTACAGAGCCATTTGTTACTGGAGTA...CTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TGCCATTTACCCACTTGCTTTAGCTCAGTAGCTGCCGAATCTCCTTGTGCATATGAAGCCATCCAGCAGTaGCACAAACATGTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: CHLPTCFSSVAAESPCAYEAIQQ*HKHVSH
Trigger: GTGGCTGACATGTTTGTGCCACTGCTGGATGGCTTC...ATATGCACAAGGAGATTCGGCAGCTACTGAGCTAAAGCAAGTGGGTAAATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CCA 90 bp TGCTTTAGCTCAGTAGCTGCCGAATCTCCTTGTGCATATGACAGAGAAAGTCCAGAAGCCATCCAGCAGTaGCACAAACATGTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: CFSSVAAESPCAYDRESPEAIQQ*HKHVSH
Trigger: GTGGCTGACATGTTTGTGCCACTGCTGGATGGCTTC...TGGACTTTCTCTGTCATATGCACAAGGAGATTCGGCAGCTACTGAGCTAAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CCA 90 bp AGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATCCACGGAGTGATCATCAAGCCTCCATTCCAGCCTaGATAACTGGTACAAATACT +
Preference number: 4 (lower is better)
Translates to: SSPVTSDSVPLYPRSDHQASIPA*ITGTNT
Trigger: AGTATTTGTACCAGTTATCCAGGCTGGAATGGAGGC...TTGATGATCACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AAGGATCAACTGTCCTGCAGAGGAGGGGCTAGCACAGTTCTTTCTGTAACAGGCGCCTCCATTCCAGCCTaGATAACTGGTACAAATACT +
Preference number: 4 (lower is better)
Translates to: KDQLSCRGGASTVLSVTGASIPA*ITGTNT
Trigger: AGTATTTGTACCAGTTATCCAGGCTGGAATGGAGGC...GCCTGTTACAGAAAGAACTGTGCTAGCCCCTCCTCTGCAGGACAGTTGATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp TGCTTTAGCTCAGTAGCTGCCGAATCTCCTTGTGCATATGACAGAGAAAGTCCAGGCTCGAACTGCTGGTaGTTCGGTAGTACTCTCAAC +
Preference number: 4 (lower is better)
Translates to: CFSSVAAESPCAYDRESPGSNCW*FGSTLN
Trigger: GTTGAGAGTACTACCGAACCACCAGCAGTTCGAGCC...TGGACTTTCTCTGTCATATGCACAAGGAGATTCGGCAGCTACTGAGCTAAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CCA 90 bp TGCCATTTACCCACTTGCTTTAGCTCAGTAGCTGCCGAATCTCCTTGTGCATATACGCTGAAAAGGCTCTaGACAACACCCTGTTGGACG +
Preference number: 4 (lower is better)
Translates to: CHLPTCFSSVAAESPCAYTLKRL*TTPCWT
Trigger: CGTCCAACAGGGTGTTGTCCAGAGCCTTTTCAGCGT...ATATGCACAAGGAGATTCGGCAGCTACTGAGCTAAAGCAAGTGGGTAAATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CCA 90 bp AAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGAACCTTCTTGGACAGTaGATTATCCAGAACTGGCAG +
Preference number: 4 (lower is better)
Translates to: KITVSHSVNTKAQAVSQQNLLGQ*IIQNWQ
Trigger: CTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTT...CTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTATATGTTTTATCCCTAAAGCAGTGTTTCTCGTaGGAGCTCAGAGTGGGATGT +
Preference number: 4 (lower is better)
Translates to: PPPMGYTPALVHLYVLSLKQCFS*ELRVGC
Trigger: ACATCCCACTCTGAGCTCCCACGAGAAACACTGCTT...TAGGGATAAAACATATAGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp GAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCAAACCACTGGTGGCACAGGTGGAACTaGCTGGTTGACGTTCATTAT +
Preference number: 4 (lower is better)
Translates to: EPSWTVDYPELAEHSNHWWHRWN*LVDVHY
Trigger: ATAATGAACGTCAACCAGTCAGTTCCACCTGTGCCA...CCAGTGGTTTGAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR TCA 90 bp TCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCAAACCACTGCACCTTATTGTAGGTaGCAAAGCCAACGCGGATTG +
Preference number: 4 (lower is better)
Translates to: SNLLGQWIIQNWQNTQTTAPYCR*QSQRGL
Trigger: CAATCCGCGTTGGCTTTGTCACCTACAATAAGGTGC...AGTGGTTTGAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR TCA 90 bp CCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTATATGTTTTATCCCTACTGTGGCTGGGCCAATaGGCTCTTCACATTATAGAA +
Preference number: 4 (lower is better)
Translates to: PPPMGYTPALVHLYVLSLLWLGQ*ALHIIE
Trigger: TTCTATAATGTGAAGAGCTCATTGGCCCAGCCACAG...TAGGGATAAAACATATAGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CTATCAATGAGGCCTCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGACTGTGGCTGGGCCAATaGGCTCTTCACATTATAGAA +
Preference number: 4 (lower is better)
Translates to: LSMRPRTFLDSGLSRTGRLWLGQ*ALHIIE
Trigger: TTCTATAATGTGAAGAGCTCATTGGCCCAGCCACAG...TCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCCTCATTGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR TCA 90 bp CTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTAACATTTCTGGAATCTaGTCCAATAAGCTGGTGATA +
Preference number: 4 (lower is better)
Translates to: LQNHPVLGPLQLERKLVPNISGI*SNKLVI
Trigger: TATCACCAGCTTATTGGATCAGATTCCAGAAATGTT...AGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp TGCCATTTACCCACTTGCTTTAGCTCAGTAGCTGCCGAATCTCCTTGTGCATATGCCGATCGTCATGCTTaGACTCCACAGTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: CHLPTCFSSVAAESPCAYADRHA*TPQSLF
Trigger: AAACAGTGACTGTGGAGTTCAAGCATGACGATCGGC...ATATGCACAAGGAGATTCGGCAGCTACTGAGCTAAAGCAAGTGGGTAAATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR TCA 90 bp AGGGTCTGGGTGCCTCCAAACCCCCAATACCGAATCATATACAGTGAACTGAGATCTCTATCCACGGAGTaGTCATCAATCATTGCAGGA +
Preference number: 4 (lower is better)
Translates to: RVWVPPNPQYRIIYSELRSLSTE*SSIIAG
Trigger: TCCTGCAATGATTGATGATCACTCCGTGGATAGAGA...TCTCAGTTCACTGTATATGATTCGGTATTGGGGGTTTGGAGGCACCCAGACCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCTCCAAACCCCCAATACCGGAACTTATTGTTCTTaGAGTAATCTACAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: PKGHIILPGSGCLQTPNTGTYCS*SNLQWP
Trigger: TGGCCACTGTAGATTACTGCAAGAACAATAAGTTCC...GGTATTGGGGGTTTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp AGAAGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGTGTTTCCCTTGTGTCTaGAAACATTTCTGGAATCTG +
Preference number: 4 (lower is better)
Translates to: RSSVSRGSSEWDVNWLCECFPCV*KHFWNL
Trigger: CAGATTCCAGAAATGTTTGCAGACACAAGGGAAACA...CTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp AGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTATGTTTCCCTTGTGTCTaGAAACATTTCTGGAATCTG +
Preference number: 4 (lower is better)
Translates to: SSVSRGSSEWDVNWLCEVCFPCV*KHFWNL
Trigger: CAGATTCCAGAAATGTTTGCAGACACAAGGGAAACA...TACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp TGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCATGTTTCCCTTGTGTCTaGAAACATTTCTGGAATCTG +
Preference number: 4 (lower is better)
Translates to: CLPLSSWETGPKGHIILPCFPCV*KHFWNL
Trigger: CAGATTCCAGAAATGTTTGCAGACACAAGGGAAACA...TGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTATATGTTTTATCCCTACAGGACTCCCCGATATaGAAACTTGGCCATGTAGTT +
Preference number: 4 (lower is better)
Translates to: PPPMGYTPALVHLYVLSLQDSPI*KLGHVV
Trigger: AACTACATGGCCAAGTTTGCATATCGGGGAGTCCTG...TAGGGATAAAACATATAGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CCCACCCAGAGGAAGAGGTTGAGCCCATTCTCCAGTAAATATATATCCCCATTGCTGGGAGTAGCTTCATaGACTCAGGAAGGATCAACT +
Preference number: 4 (lower is better)
Translates to: PTQRKRLSPFSSKYISPLLGVAS*TQEGST
Trigger: AGTTGATCCTTCCTGAGTGCATGAAGCTACTCCCAG...CAATGGGGATATATATTTACTGGAGAATGGGCTCAACCTCTTCCTCTGGGTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp CTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTAATATATATCCCCATTaGTTAGACGCTCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: LTTFLSTTYGLYPSSCAPNIYPH*LDALQR
Trigger: CCTCTGAAGAGCGTCTAAGCAATGGGGATATATATT...AGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp TGCTTTAGCTCAGTAGCTGCCGAATCTCCTTGTGCATATGACAGAGAAAGTCCACTAGCCTGGGCCCTATaGCATTTACCCACTTGCTTT +
Preference number: 4 (lower is better)
Translates to: CFSSVAAESPCAYDRESPLAWAL*HLPTCF
Trigger: AAAGCAAGTGGGTAAATGGCATAGGGCCCAGGCTAG...TGGACTTTCTCTGTCATATGCACAAGGAGATTCGGCAGCTACTGAGCTAAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR GCA 90 bp CCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTTTGCTCTGACATCCTGGGGTaGTTTCTGGAAGCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: PLQLERKLVPLPDLNIFCSDILG*FLEASL
Trigger: CAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA...GCAAAATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CTCCCTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTGATCTTAATATATTTTaGAACTCAGTTCTCCGGTCA +
Preference number: 4 (lower is better)
Translates to: LPTEPSSVGASPAGKEAGDLNIF*NSVLRS
Trigger: TGACCGGAGAACTGAGTTGCAAAATATATTAAGATC...ACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp GAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCGATCTTAATATATTTTaGAACTCAGTTCTCCGGTCA +
Preference number: 4 (lower is better)
Translates to: EPSSVGASPAGKEAGTSTDLNIF*NSVLRS
Trigger: TGACCGGAGAACTGAGTTGCAAAATATATTAAGATC...GGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TCCTGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGACAGGTGGAACTGACTaGTTGACGTTCATTATGAAA +
Preference number: 4 (lower is better)
Translates to: SCLPLSSWETGPKGHIILTGGTD*LTFIMK
Trigger: TTTCATAATGAACGTCAACCAGTCAGTTCCACCTGT...CAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp AGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTAACAGGTGGAACTGACTaGTTGACGTTCATTATGAAA +
Preference number: 4 (lower is better)
Translates to: SSVSRGSSEWDVNWLCEVTGGTD*LTFIMK
Trigger: TTTCATAATGAACGTCAACCAGTCAGTTCCACCTGT...TACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TATAGGATGTACATCGGATGTATCGGGGACTTGCATTCCCTTGGTCTTTCACCAATTGCCCACCATAGCTaGACTGATGATACCCTGGGT +
Preference number: 4 (lower is better)
Translates to: YRMYIGCIGDLHSLGLSPIAHHS*TDDTLG
Trigger: ACCCAGGGTATCATCAGTCCAGCTATGGTGGGCAAT...TGGTGAAAGACCAAGGGAATGCAAGTCCCCGATACATCCGATGTACATCCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp AGGGTCTGGGTGCCTCCAAACCCCCAATACCGAATCATATACAGTGAACTGAGATTCTGTACATCTCCTTaGCCAAACTGGCCATATGCA +
Preference number: 4 (lower is better)
Translates to: RVWVPPNPQYRIIYSELRFCTSP*PNWPYA
Trigger: TGCATATGGCCAGTTTGGCCAAGGAGATGTACAGAA...TCTCAGTTCACTGTATATGATTCGGTATTGGGGGTTTGGAGGCACCCAGACCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTTTGCAAAGGTGGGTGCTGCTaGGTAGGGGCCTCCATAATT +
Preference number: 4 (lower is better)
Translates to: PLQLERKLVPLPDLNIFCKGGCC*VGASII
Trigger: AATTATGGAGGCCCCTACCCAGCAGCACCCACCTTT...GCAAAATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CAGAGTGGCAGGATACTTGAGCCCAGAAAGAAGGTGTCTCCTTATATCTCCCCCTCCAGCCTGGATAACTaGTACAAATACTGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: QSGRILEPRKKVSPYISPSSLDN*YKYCLC
Trigger: ACAGAGACAGTATTTGTACCAGTTATCCAGGCTGGA...GGGGGAGATATAAGGAGACACCTTCTTTCTGGGCTCAAGTATCCTGCCACTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp GCAGGGATGTATGGAATAGAAAGAGCTTCCCTGCACACTCAGCAGCCTTCAGAGTCCAGCCTGGATAACTaGTACAAATACTGTCTCTGT +
Preference number: 4 (lower is better)
Translates to: AGMYGIERASLHTQQPSESSLDN*YKYCLC
Trigger: ACAGAGACAGTATTTGTACCAGTTATCCAGGCTGGA...CTCTGAAGGCTGCTGAGTGTGCAGGGAAGCTCTTTCTATTCCATACATCCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp AGAAACTTGACTGCTAACCTCCAGGCCCAAGAAGGACTGACCACTTTTCTCTCCAACCTTCTTGGACAGTaGATTATCCAGAACTGGCAG +
Preference number: 4 (lower is better)
Translates to: RNLTANLQAQEGLTTFLSNLLGQ*IIQNWQ
Trigger: CTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTT...GGAGAGAAAAGTGGTCAGTCCTTCTTGGGCCTGGAGGTTAGCAGTCAAGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp GCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAAGCTGGAAAGGAAGCTaGTACCTCTACCAGATCTTA +
Preference number: 4 (lower is better)
Translates to: ASWGWKITVSHSVNTKAQSWKGS*YLYQIL
Trigger: TAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCT...TTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTTTGCGCACCTTATTGTAGGTaGCAAAGCCAACGCGGATTG +
Preference number: 4 (lower is better)
Translates to: PLQLERKLVPLPDLNIFCAPYCR*QSQRGL
Trigger: CAATCCGCGTTGGCTTTGTCACCTACAATAAGGTGC...GCAAAATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp AGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTATTGCCGAATCATATACAGTaGACTGAGAAGCTACATTCA +
Preference number: 4 (lower is better)
Translates to: SVSRGSSEWDVNWLCEVLPNHIQ*TEKLHS
Trigger: TGAATGTAGCTTCTCAGTTCACTGTATATGATTCGG...CAATACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CTATCAATGAGGCCTCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGACCACATCTGTCGTGTTaGTCATGTAGAAAGCTCCAA +
Preference number: 4 (lower is better)
Translates to: LSMRPRTFLDSGLSRTGRPHLSC*SCRKLQ
Trigger: TTGGAGCTTTCTACATGAGCAACACGACAGATGTGG...TCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCCTCATTGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR GCA 90 bp CTTGTGCATATGACAGAGAAAGTCCACATAAGATGCTCCCCCACTCAGACTCTTCAGGACTCCCCGATATaGAAACTTGGCCATGTAGTT +
Preference number: 4 (lower is better)
Translates to: LVHMTEKVHIRCSPTQTLQDSPI*KLGHVV
Trigger: AACTACATGGCCAAGTTTGCATATCGGGGAGTCCTG...AAGAGTCTGAGTGGGGGAGCATCTTATGTGGACTTTCTCTGTCATATGCACAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR GCA 90 bp CCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTTTGCTTCAGAGGCTCGAACTaGTGGTGGTTCGGTAGTACT +
Preference number: 4 (lower is better)
Translates to: PLQLERKLVPLPDLNIFCFRGSN*WWFGST
Trigger: AGTACTACCGAACCACCAGCAGTTCGAGCCTCTGAA...GCAAAATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp CAGAGTGGCAGGATACTTGAGCCCAGAAAGAAGGTGTCTCCTTATATCTCCCCCAATATATATCCCCATTaGTTAGACGCTCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: QSGRILEPRKKVSPYISPNIYPH*LDALQR
Trigger: CCTCTGAAGAGCGTCTAAGCAATGGGGATATATATT...GGGGGAGATATAAGGAGACACCTTCTTTCTGGGCTCAAGTATCCTGCCACTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp TATAGGATGTACATCGGATGTATCGGGGACTTGCATTCCCTTGGTCTTTCACCATCTTCCACCAGGAAGTaGTTGAACAGCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: YRMYIGCIGDLHSLGLSPSSTRK*LNSISI
Trigger: GATGGAGATGCTGTTCAAGCACTTCCTGGTGGAAGA...TGGTGAAAGACCAAGGGAATGCAAGTCCCCGATACATCCGATGTACATCCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp CCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTTTGCGGCTCTGTGAGGTATTaGAAGTTGATGACCAGGCTC +
Preference number: 4 (lower is better)
Translates to: PLQLERKLVPLPDLNIFCGSVRY*KLMTRL
Trigger: GAGCCTGGTCATCAACTTGCAATACCTCACAGAGCC...GCAAAATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTTTGCATTGCCCACCATAGCTaGACTGATGATACCCTGGGT +
Preference number: 4 (lower is better)
Translates to: PLQLERKLVPLPDLNIFCIAHHS*TDDTLG
Trigger: ACCCAGGGTATCATCAGTCCAGCTATGGTGGGCAAT...GCAAAATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CAGATGTGCAAGGGATATTATAGGATGTACATCGGATGTATCGGGGACTTGCATCTGCAAAAACAGCACTaGAAACGCCTCCCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: QMCKGYYRMYIGCIGDLHLQKQH*KRLPPS
Trigger: TGAAGGAGGGAGGCGTTTCCAGTGCTGTTTTTGCAG...ATGCAAGTCCCCGATACATCCGATGTACATCCTATAATATCCCTTGCACATCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp CCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTATATGTTTTATCCCTAATGGGCAGGGATGTATaGAATAGAAAGAGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: PPPMGYTPALVHLYVLSLMGRDV*NRKSFP
Trigger: AGGGAAGCTCTTTCTATTCCATACATCCCTGCCCAT...TAGGGATAAAACATATAGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CAGATGTGCAAGGGATATTATAGGATGTACATCGGATGTATCGGGGACTTGCATAAGCCAACAACCTTCTaGACATCACGACGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: QMCKGYYRMYIGCIGDLHKPTTF*TSRRRS
Trigger: TGACCTGCGTCGTGATGTCCAGAAGGTTGTTGGCTT...ATGCAAGTCCCCGATACATCCGATGTACATCCTATAATATCCCTTGCACATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp TGCCATTTACCCACTTGCTTTAGCTCAGTAGCTGCCGAATCTCCTTGTGCATATCTCCTCTTGGGAGACTaGTCCAAAGGGACACATAAT +
Preference number: 4 (lower is better)
Translates to: CHLPTCFSSVAAESPCAYLLLGD*SKGTHN
Trigger: ATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAG...ATATGCACAAGGAGATTCGGCAGCTACTGAGCTAAAGCAAGTGGGTAAATGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465076.5
3UTR CAA 72 bp AGGTTGAGCCCATTCTCCAGTAAATATATATCCCCATaGCTTAGACGCTCTTCAGAGGCTCGAACTGCTGGT +
Preference number: 4 (lower is better)
Translates to: RLSPFSSKYISP*LRRSSEARTAG
Trigger: ACCAGCAGTTCGAGCCTCTGAAGAGCGTCTAAGCAATGGGGATATATATTTACTGGAGAATGGGCTCAACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR TCA 90 bp CAGATGTGCAAGGGATATTATAGGATGTACATCGGATGTATCGGGGACTTGCATCTGTGGCTGGGCCAATaGGCTCTTCACATTATAGAA +
Preference number: 4 (lower is better)
Translates to: QMCKGYYRMYIGCIGDLHLWLGQ*ALHIIE
Trigger: TTCTATAATGTGAAGAGCTCATTGGCCCAGCCACAG...ATGCAAGTCCCCGATACATCCGATGTACATCCTATAATATCCCTTGCACATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR TCA 90 bp CAGAGTGGCAGGATACTTGAGCCCAGAAAGAAGGTGTCTCCTTATATCTCCCCCAACATTTCTGGAATCTaGTCCAATAAGCTGGTGATA +
Preference number: 4 (lower is better)
Translates to: QSGRILEPRKKVSPYISPNISGI*SNKLVI
Trigger: TATCACCAGCTTATTGGATCAGATTCCAGAAATGTT...GGGGGAGATATAAGGAGACACCTTCTTTCTGGGCTCAAGTATCCTGCCACTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CCTCCAAACCCCCAATACCGAATCATATACAGTGAACTGAGAAGCTACATTCATAGAGCGAGCGAGCAGTaGAAGCAGAGAAACTTGACT +
Preference number: 4 (lower is better)
Translates to: PPNPQYRIIYSELRSYIHRASEQ*KQRNLT
Trigger: AGTCAAGTTTCTCTGCTTTCACTGCTCGCTCGCTCT...ATGAATGTAGCTTCTCAGTTCACTGTATATGATTCGGTATTGGGGGTTTGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR TCA 90 bp CCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTTTGCTCCCCAAGTGTTCCCTaGTATTTGAGGGTACTAGCA +
Preference number: 4 (lower is better)
Translates to: PLQLERKLVPLPDLNIFCSPSVP*YLRVLA
Trigger: TGCTAGTACCCTCAAATATCAGGGAACACTTGGGGA...GCAAAATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465076.5
CDS-3UTR GCA 90 bp CCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTTTGCTCTTCCACCAGGAAGTaGTTGAACAGCATCTCCATC +
Preference number: 4 (lower is better)
Translates to: PLQLERKLVPLPDLNIFCSSTRK*LNSISI
Trigger: GATGGAGATGCTGTTCAAGCACTTCCTGGTGGAAGA...GCAAAATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CCTCCAAACCCCCAATACCGAATCATATACAGTGAACTGAGAAGCTACATTCATCTGATAGCCTGGTACTaGGCCATTGTAGGCTCCATA +
Preference number: 4 (lower is better)
Translates to: PPNPQYRIIYSELRSYIHLIAWY*AIVGSI
Trigger: TATGGAGCCTACAATGGCCCAGTACCAGGCTATCAG...ATGAATGTAGCTTCTCAGTTCACTGTATATGATTCGGTATTGGGGGTTTGGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCAAACCACTTACTCCAGTAACAAATaGCTCTGTACCCCGGTTGTT +
Preference number: 4 (lower is better)
Translates to: SNLLGQWIIQNWQNTQTTYSSNK*LCTPVV
Trigger: AACAACCGGGGTACAGAGCCATTTGTTACTGGAGTA...AGTGGTTTGAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CCA 90 bp CTTGTGCATATGACAGAGAAAGTCCACATAAGATGCTCCCCCACTCAGACTCTTGCCTCCATTCCAGCCTaGATAACTGGTACAAATACT +
Preference number: 4 (lower is better)
Translates to: LVHMTEKVHIRCSPTQTLASIPA*ITGTNT
Trigger: AGTATTTGTACCAGTTATCCAGGCTGGAATGGAGGC...AAGAGTCTGAGTGGGGGAGCATCTTATGTGGACTTTCTCTGTCATATGCACAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CCA 90 bp TCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCAAACCACTATGGGCAGGGATGTATaGAATAGAAAGAGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SNLLGQWIIQNWQNTQTTMGRDV*NRKSFP
Trigger: AGGGAAGCTCTTTCTATTCCATACATCCCTGCCCAT...AGTGGTTTGAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR TCA 90 bp AGCCATCCAGCAGTGGCACAAACATGTCAGCCACATCAGACACAACCATCATCTAACATTTCTGGAATCTaGTCCAATAAGCTGGTGATA +
Preference number: 4 (lower is better)
Translates to: SHPAVAQTCQPHQTQPSSNISGI*SNKLVI
Trigger: TATCACCAGCTTATTGGATCAGATTCCAGAAATGTT...AGATGATGGTTGTGTCTGATGTGGCTGACATGTTTGTGCCACTGCTGGATGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp CCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTATATGTTTTATCCCTAAATATATATCCCCATTaGTTAGACGCTCTTCAGAGG +
Preference number: 4 (lower is better)
Translates to: PPPMGYTPALVHLYVLSLNIYPH*LDALQR
Trigger: CCTCTGAAGAGCGTCTAAGCAATGGGGATATATATT...TAGGGATAAAACATATAGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp TGCTTTAGCTCAGTAGCTGCCGAATCTCCTTGTGCATATGACAGAGAAAGTCCAATACCCCAGCTCTTGTaGACCTATATGTTTTATCCC +
Preference number: 4 (lower is better)
Translates to: CFSSVAAESPCAYDRESPIPQLL*TYMFYP
Trigger: GGGATAAAACATATAGGTGCACAAGAGCTGGGGTAT...TGGACTTTCTCTGTCATATGCACAAGGAGATTCGGCAGCTACTGAGCTAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000465076.5
CDS-3UTR CCA 90 bp CCTCCAAACCCCCAATACCGAATCATATACAGTGAACTGAGAAGCTACATTCATGGCCTCGAACCTTCTTaGACAGTGGATTATCCAGAA +
Preference number: 4 (lower is better)
Translates to: PPNPQYRIIYSELRSYIHGLEPS*TVDYPE
Trigger: TTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCC...ATGAATGTAGCTTCTCAGTTCACTGTATATGATTCGGTATTGGGGGTTTGGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp TATAGGATGTACATCGGATGTATCGGGGACTTGCATTCCCTTGGTCTTTCACCAGGAACTTATTGTTCTTaGAGTAATCTACAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: YRMYIGCIGDLHSLGLSPGTYCS*SNLQWP
Trigger: TGGCCACTGTAGATTACTGCAAGAACAATAAGTTCC...TGGTGAAAGACCAAGGGAATGCAAGTCCCCGATACATCCGATGTACATCCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR GCA 90 bp CCTCCAAACCCCCAATACCGAATCATATACAGTGAACTGAGAAGCTACATTCATAAAGTCCACATAAGATaGTCCCCCACTCAGACTCTT +
Preference number: 4 (lower is better)
Translates to: PPNPQYRIIYSELRSYIHKVHIR*SPTQTL
Trigger: AAGAGTCTGAGTGGGGGAGCATCTTATGTGGACTTT...ATGAATGTAGCTTCTCAGTTCACTGTATATGATTCGGTATTGGGGGTTTGGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR GCA 90 bp AGGGTCTGGGTGCCTCCAAACCCCCAATACCGAATCATATACAGTGAACTGAGAGATCTTAATATATTTTaGAACTCAGTTCTCCGGTCA +
Preference number: 4 (lower is better)
Translates to: RVWVPPNPQYRIIYSELRDLNIF*NSVLRS
Trigger: TGACCGGAGAACTGAGTTGCAAAATATATTAAGATC...TCTCAGTTCACTGTATATGATTCGGTATTGGGGGTTTGGAGGCACCCAGACCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp TGCTTTAGCTCAGTAGCTGCCGAATCTCCTTGTGCATATGACAGAGAAAGTCCAACAGGTGGAACTGACTaGTTGACGTTCATTATGAAA +
Preference number: 4 (lower is better)
Translates to: CFSSVAAESPCAYDRESPTGGTD*LTFIMK
Trigger: TTTCATAATGAACGTCAACCAGTCAGTTCCACCTGT...TGGACTTTCTCTGTCATATGCACAAGGAGATTCGGCAGCTACTGAGCTAAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR TCA 90 bp CCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTTTGCCCGAATCATATACAGTaGACTGAGAAGCTACATTCA +
Preference number: 4 (lower is better)
Translates to: PLQLERKLVPLPDLNIFCPNHIQ*TEKLHS
Trigger: TGAATGTAGCTTCTCAGTTCACTGTATATGATTCGG...GCAAAATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CCA 90 bp CCTCCAAACCCCCAATACCGAATCATATACAGTGAACTGAGAAGCTACATTCATTGGATTATCCAGAACTaGCAGAACACTCAAACCACT +
Preference number: 4 (lower is better)
Translates to: PPNPQYRIIYSELRSYIHWIIQN*QNTQTT
Trigger: AGTGGTTTGAGTGTTCTGCCAGTTCTGGATAATCCA...ATGAATGTAGCTTCTCAGTTCACTGTATATGATTCGGTATTGGGGGTTTGGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339365.2
ENST00000345254.9
CDS-3UTR CAA 90 bp CAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCAGCCTTGCCAGCGGTTaGATGACTGCTGCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: QYQSPSGVPAGENGAPAASLASG*MTAARG
Trigger: GCCCCTGGCAGCAGTCATCAAACCGCTGGCAAGGCT...GGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS GCA 90 bp CACAGCACCGCTGATCTGCATTCCAGACAGCTGCGTAGCCACCTGTaGACTTGTCGGGGGAGGGCCATAGGGCTGAAGCACAGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: HSTADLHSRQLRSHL*TCRGRAIGLKHRWL
Trigger: CAGCCACCTGTGCTTCAGCCCTATGGCCCTCCCCCGACAAGTGCACAGGTGGCTACGCAGCTGTCTGGAATGCAGATCAGCGGTGCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CAA 90 bp CCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTAAGGAGCCTGTGCTGTaGAGGCTGGAGGTGCCCCCG +
Preference number: 5 (lower is better)
Translates to: PLSQYQSPSGVPAGENGAKEPVL*RLEVPP
Trigger: CGGGGGCACCTCCAGCCTCAACAGCACAGGCTCCTT...AGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCCTGGACAACACCCTGTaGGACGCTTGCTCCCACCCA +
Preference number: 5 (lower is better)
Translates to: QYQSPSGVPAGENGAPAALDNTL*DACSHP
Trigger: TGGGTGGGAGCAAGCGTCCAACAGGGTGTTGTCCAG...GGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS CCA 90 bp CATAGGGAATGGCGGGGGCTGTGGACCCTGATTGCCCACCATAGCTaGACTGATGATACCCTGGGTAGATGGGCTGGGGCTGCCCAAATG +
Preference number: 5 (lower is better)
Translates to: HREWRGLWTLIAHHS*TDDTLGRWAGAAQM
Trigger: CATTTGGGCAGCCCCAGCCCATCTACCCAGGGTATCATCAGTCCAGCTATGGTGGGCAATCAGGGTCCACAGCCCCCGCCATTCCCTATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000477008.1
ENST00000635550.1
CDS-3UTR CAA 90 bp GGTAGAATGAGGGAACAGGGGCACCTTCCATCAGCAGGACATGACAGAGTGGCAAAGGAGCCTGTGCTGTaGAGGCTGGAGGTGCCCCCG +
Preference number: 5 (lower is better)
Translates to: GRMREQGHLPSAGHDRVAKEPVL*RLEVPP
Trigger: CGGGGGCACCTCCAGCCTCAACAGCACAGGCTCCTT...TGCCACTCTGTCATGTCCTGCTGATGGAAGGTGCCCCTGTTCCCTCATTCTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCTGGACAACACCCTGTaGGACGCTTGCTCCCACCCA +
Preference number: 5 (lower is better)
Translates to: PLSQYQSPSGVPAGENGALDNTL*DACSHP
Trigger: TGGGTGGGAGCAAGCGTCCAACAGGGTGTTGTCCAG...AGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS TCA 90 bp TGGGCCATTGTAGGCTCCATAGGGAATGGCGGGGGCTGTGGACCCTaGTTGCCCACCATAGCTGGACTGATGATACCCTGGGTAGATGGG +
Preference number: 5 (lower is better)
Translates to: WAIVGSIGNGGGCGP*LPTIAGLMIPWVDG
Trigger: CCCATCTACCCAGGGTATCATCAGTCCAGCTATGGTGGGCAATCAGGGTCCACAGCCCCCGCCATTCCCTATGGAGCCTACAATGGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000477008.1
ENST00000635550.1
CDS CCA 90 bp CTGGTACTGGGCCATTGTAGGCTCCATAGGGAATGGCGGGGGCTGTaGACCCTGATTGCCCACCATAGCTGGACTGATGATACCCTGGGT +
Preference number: 5 (lower is better)
Translates to: LVLGHCRLHREWRGL*TLIAHHSWTDDTLG
Trigger: ACCCAGGGTATCATCAGTCCAGCTATGGTGGGCAATCAGGGTCCACAGCCCCCGCCATTCCCTATGGAGCCTACAATGGCCCAGTACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000477008.1
ENST00000635550.1
CDS-3UTR CAA 90 bp AAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCTCTGCCTGGGACTTGCATTCCCTaGGTCTTTCACCAGGAAGTT +
Preference number: 5 (lower is better)
Translates to: KAQAVSQQERTALQLPLPGTCIP*VFHQEV
Trigger: AACTTCCTGGTGAAAGACCAAGGGAATGCAAGTCCC...AGGCAGAGGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCAAGGGACACATAATATaGCCAGGGTCTGGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: QYQSPSGVPAGENGAPAAKGHII*PGSGCL
Trigger: GAGGCACCCAGACCCTGGCAATATTATGTGTCCCTT...GGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCGTGAGGTATTGCAAGTaGATGACCAGGCTCCCTAGG +
Preference number: 5 (lower is better)
Translates to: QYQSPSGVPAGENGAPAAVRYCK*MTRLPR
Trigger: CCTAGGGAGCCTGGTCATCAACTTGCAATACCTCAC...GGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS CCA 90 bp ACCCTGATTGCCCACCATAGCTGGACTGATGATACCCTGGGTAGATaGGCTGGGGCTGCCCAAATGGTGGCACAGGTGGAACTGACTGGT +
Preference number: 5 (lower is better)
Translates to: TLIAHHSWTDDTLGR*AGAAQMVAQVELTG
Trigger: ACCAGTCAGTTCCACCTGTGCCACCATTTGGGCAGCCCCAGCCCATCTACCCAGGGTATCATCAGTCCAGCTATGGTGGGCAATCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CAA 90 bp CAGAGTGGCAGGATACTTGAGCCCAGAAAGAAGGTGTCTCCTTATATCTCCCCCAAGGAGCCTGTGCTGTaGAGGCTGGAGGTGCCCCCG +
Preference number: 5 (lower is better)
Translates to: QSGRILEPRKKVSPYISPKEPVL*RLEVPP
Trigger: CGGGGGCACCTCCAGCCTCAACAGCACAGGCTCCTT...GGGGGAGATATAAGGAGACACCTTCTTTCTGGGCTCAAGTATCCTGCCACTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CTCTGCCTCTCTCCCCAACAACCCCGGGCCTGGAGAAGCAGTGTTTCTCGTGGGTCTTTCACCAGGAAGTaGGTAGTGACTAAGGGTGGC +
Preference number: 5 (lower is better)
Translates to: LCLSPQQPRAWRSSVSRGSFTRK*VVTKGG
Trigger: GCCACCCTTAGTCACTACCAACTTCCTGGTGAAAGA...CCCACGAGAAACACTGCTTCTCCAGGCCCGGGGTTGTTGGGGAGAGAGGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp TCCTGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGAGCCTTGCCAGCGGTTaGATGACTGCTGCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: SCLPLSSWETGPKGHIILSLASG*MTAARG
Trigger: GCCCCTGGCAGCAGTCATCAAACCGCTGGCAAGGCT...CAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCGAGACTCATTGACGTaGACCAGGAAGCCATCCAGC +
Preference number: 5 (lower is better)
Translates to: PLSQYQSPSGVPAGENGARDSLT*TRKPSS
Trigger: GCTGGATGGCTTCCTGGTCAACGTCAATGAGTCTCG...AGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CCTGGGGCCTCTGCAATGGGCAGGGATGTATGGAATAGAAAGAGCTTCCCTGCACACGGATACCAGTGCTaGTCCGGACCCGCATCACAG +
Preference number: 5 (lower is better)
Translates to: PGASAMGRDVWNRKSFPAHGYQC*SGPASQ
Trigger: CTGTGATGCGGGTCCGGACAAGCACTGGTATCCGTG...TGCAGGGAAGCTCTTTCTATTCCATACATCCCTGCCCATTGCAGAGGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CAA 90 bp CAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCACCCAGAGGAAGAGGTaGAGCCCATTCTCCAGTAAA +
Preference number: 5 (lower is better)
Translates to: QYQSPSGVPAGENGAPAATQRKR*SPFSSK
Trigger: TTTACTGGAGAATGGGCTCAACCTCTTCCTCTGGGT...GGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTCCAGCTGCCTCTGCCTAACAGCATCTCCATCTaGTCTTCCTGTTTCACCACG +
Preference number: 5 (lower is better)
Translates to: KAQAVSQQERTALQLPLPNSISI*SSCFTT
Trigger: CGTGGTGAAACAGGAAGACAAGATGGAGATGCTGTT...AGGCAGAGGCAGCTGGAGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AGAAGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGCCTGCCCCTCTCCTCTaGGGAGACTGGTCCAAAGGG +
Preference number: 5 (lower is better)
Translates to: RSSVSRGSSEWDVNWLCEPAPLL*GDWSKG
Trigger: CCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGG...CTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp TCCTGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCTGCCCCTCTCCTCTaGGGAGACTGGTCCAAAGGG +
Preference number: 5 (lower is better)
Translates to: SCLPLSSWETGPKGHIILPAPLL*GDWSKG
Trigger: CCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGG...CAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp GAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCCAGAACCATCCAGTGTaGGGGCCTCTCCAGCTGGAA +
Preference number: 5 (lower is better)
Translates to: EPSSVGASPAGKEAGTSTQNHPV*GPLQLE
Trigger: TTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTG...GGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS CCA 90 bp TTTGCTGATAGCCTGGTACTGGGCCATTGTAGGCTCCATAGGGAATaGCGGGGGCTGTGGACCCTGATTGCCCACCATAGCTGGACTGAT +
Preference number: 5 (lower is better)
Translates to: FADSLVLGHCRLHRE*RGLWTLIAHHSWTD
Trigger: ATCAGTCCAGCTATGGTGGGCAATCAGGGTCCACAGCCCCCGCCATTCCCTATGGAGCCTACAATGGCCCAGTACCAGGCTATCAGCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000477008.1
ENST00000635550.1
CDS-3UTR CAA 90 bp TACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCAGGAAGGTGGGGCTCTaGACATACCTTGGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: YRTIQCWGLSSWKGSWYLRKVGL*TYLGEV
Trigger: CACCTCCCCAAGGTATGTCAAGAGCCCCACCTTCCT...GAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAGGAAGGTGGGGCTCTaGACATACCTTGGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: NCQPLSQYQSPSGVPAGERKVGL*TYLGEV
Trigger: CACCTCCCCAAGGTATGTCAAGAGCCCCACCTTCCT...CTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CAAGAAGGACTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTCTGAAGCCAGCGATGTaGGTGGGCCAAAGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: QEGLTTFLSTTYGLYPSSLKPAM*VGQSPA
Trigger: GGCTGGGCTTTGGCCCACCAACATCGCTGGCTTCAG...AGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAGTCCTTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATCCACGGAGTGATCATCAACTGAAGCCAGCGATGTaGGTGGGCCAAAGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: SSPVTSDSVPLYPRSDHQLKPAM*VGQSPA
Trigger: GGCTGGGCTTTGGCCCACCAACATCGCTGGCTTCAG...TTGATGATCACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTGGACACATGTATGCTTaGCAGCGGTTGCAGCGCAAA +
Preference number: 5 (lower is better)
Translates to: PLSQYQSPSGVPAGENGAGHMYA*QRLQRK
Trigger: TTTGCGCTGCAACCGCTGCAAAGCATACATGTGTCC...AGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCAAAGCCAACGCGGATaGCTGACTCTTCTGCCCCAC +
Preference number: 5 (lower is better)
Translates to: LQNHPVLGPLQLERKLVPQSQRG*LTLLPH
Trigger: GTGGGGCAGAAGAGTCAGCAATCCGCGTTGGCTTTG...AGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp GAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCACTGCCCGAGACTCATaGACGTTGACCAGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: EPSSVGASPAGKEAGTSTTARDS*TLTRKP
Trigger: TGGCTTCCTGGTCAACGTCAATGAGTCTCGGGCAGT...GGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CTGTCGGACATAGGCACGGTCATCAGTAGTGACTTCAGCTCCAGGCTGCAGGACACTGCCCGAGACTCATaGACGTTGACCAGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: LSDIGTVISSDFSSRLQDTARDS*TLTRKP
Trigger: TGGCTTCCTGGTCAACGTCAATGAGTCTCGGGCAGT...GTCCTGCAGCCTGGAGCTGAAGTCACTACTGATGACCGTGCCTATGTCCGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CAA 90 bp TGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCTCCAACACGGATACCAGTGCTaGTCCGGACCCGCATCACAG +
Preference number: 5 (lower is better)
Translates to: WETGPKGHIILPGSGCLQHGYQC*SGPASQ
Trigger: CTGTGATGCGGGTCCGGACAAGCACTGGTATCCGTG...TTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CTCCCTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTTCCACAGTCACTGTTTaGTCCCCATCTAGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: LPTEPSSVGASPAGKEAGSTVTV*SPSSPA
Trigger: GGCTGGGCTAGATGGGGACAAAACAGTGACTGTGGA...ACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAGCTCCGCTCTCTTCATaGAGCCGATCGTCATGCTTG +
Preference number: 5 (lower is better)
Translates to: PLSCPQASWGWKITVSHSAPLSS*SRSSCL
Trigger: CAAGCATGACGATCGGCTCAATGAAGAGAGCGGAGC...TGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGCAGAACCATCCAGTGTaGGGGCCTCTCCAGCTGGAA +
Preference number: 5 (lower is better)
Translates to: NCQPLSQYQSPSGVPAGEQNHPV*GPLQLE
Trigger: TTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTG...CTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGAGGAAGGTGGGGCTCTaGACATACCTTGGGGAGGTG +
Preference number: 5 (lower is better)
Translates to: LLLGDWSKGTHNIARVWVRKVGL*TYLGEV
Trigger: CACCTCCCCAAGGTATGTCAAGAGCCCCACCTTCCT...CACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTTCTGAACAGTGGAGCTaGGCCCATTCTGTACATCTC +
Preference number: 5 (lower is better)
Translates to: PLSQYQSPSGVPAGENGASEQWS*AHSVHL
Trigger: GAGATGTACAGAATGGGCCAAGCTCCACTGTTCAGA...AGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AGAAACTTGACTGCTAACCTCCAGGCCCAAGAAGGACTGACCACTTTTCTCTCCCTGAAGCCAGCGATGTaGGTGGGCCAAAGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: RNLTANLQAQEGLTTFLSLKPAM*VGQSPA
Trigger: GGCTGGGCTTTGGCCCACCAACATCGCTGGCTTCAG...GGAGAGAAAAGTGGTCAGTCCTTCTTGGGCCTGGAGGTTAGCAGTCAAGTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp GTACATCGGATGTATCGGGGACTTGCATTCCCTTGGTCTTTCACCAGGAAGTTGCTGAAGCCAGCGATGTaGGTGGGCCAAAGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: VHRMYRGLAFPWSFTRKLLKPAM*VGQSPA
Trigger: GGCTGGGCTTTGGCCCACCAACATCGCTGGCTTCAG...CAACTTCCTGGTGAAAGACCAAGGGAATGCAAGTCCCCGATACATCCGATGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CAA 90 bp GAGGAGGTGAAGACACATGGTTGGGCTGGCTCACTGAGGGCCCTCCAAAACTCTGAAGGAACCATTTTGTaGGGGCTGATAGCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: EEVKTHGWAGSLRALQNSEGTIL*GLIAWL
Trigger: CAGCCAGGCTATCAGCCCCAACAAAATGGTTCCTTC...AGAGTTTTGGAGGGCCCTCAGTGAGCCAGCCCAACCATGTGTCTTCACCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CAA 90 bp GAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCGGCTCTGTACCCCGGTaGTTCCTGTCATCTTCAATG +
Preference number: 5 (lower is better)
Translates to: EPSSVGASPAGKEAGTSTGSVPR*FLSSSM
Trigger: CATTGAAGATGACAGGAACAACCGGGGTACAGAGCC...GGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp GCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAAGCCTTGCCAGCGGTTaGATGACTGCTGCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: ASWGWKITVSHSVNTKAQSLASG*MTAARG
Trigger: GCCCCTGGCAGCAGTCATCAAACCGCTGGCAAGGCT...TTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AGCCATCCAGCAGTGGCACAAACATGTCAGCCACATCAGACACAACCATCATCTAGCCTTGCCAGCGGTTaGATGACTGCTGCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: SHPAVAQTCQPHQTQPSSSLASG*MTAARG
Trigger: GCCCCTGGCAGCAGTCATCAAACCGCTGGCAAGGCT...AGATGATGGTTGTGTCTGATGTGGCTGACATGTTTGTGCCACTGCTGGATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CAA 90 bp AACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGTATGCTTTGCAGCGGTaGCAGCGCAAAGGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: NCQPLSQYQSPSGVPAGEYALQR*QRKGPD
Trigger: ATCTGGCCCTTTGCGCTGCAACCGCTGCAAAGCATA...CTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAGGACACATGTATGCTTaGCAGCGGTTGCAGCGCAAA +
Preference number: 5 (lower is better)
Translates to: PLSCPQASWGWKITVSHSGHMYA*QRLQRK
Trigger: TTTGCGCTGCAACCGCTGCAAAGCATACATGTGTCC...TGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp TTCCCTGGGGCCTCTGCAATGGGCAGGGATGTATGGAATAGAAAGAGCTTCCCTCAAAGCCAACGCGGATaGCTGACTCTTCTGCCCCAC +
Preference number: 5 (lower is better)
Translates to: FPGASAMGRDVWNRKSFPQSQRG*LTLLPH
Trigger: GTGGGGCAGAAGAGTCAGCAATCCGCGTTGGCTTTG...AGGGAAGCTCTTTCTATTCCATACATCCCTGCCCATTGCAGAGGCCCCAGGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CAA 90 bp GATAACTGCCCGAGACTCATTGACGTTGACCAGGAAGCCATCCAGCAGTGGCACCGAGACTCATTGACGTaGACCAGGAAGCCATCCAGC +
Preference number: 5 (lower is better)
Translates to: DNCPRLIDVDQEAIQQWHRDSLT*TRKPSS
Trigger: GCTGGATGGCTTCCTGGTCAACGTCAATGAGTCTCG...GTGCCACTGCTGGATGGCTTCCTGGTCAACGTCAATGAGTCTCGGGCAGTTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CAA 90 bp CAGAGTGGCAGGATACTTGAGCCCAGAAAGAAGGTGTCTCCTTATATCTCCCCCCACGGATACCAGTGCTaGTCCGGACCCGCATCACAG +
Preference number: 5 (lower is better)
Translates to: QSGRILEPRKKVSPYISPHGYQC*SGPASQ
Trigger: CTGTGATGCGGGTCCGGACAAGCACTGGTATCCGTG...GGGGGAGATATAAGGAGACACCTTCTTTCTGGGCTCAAGTATCCTGCCACTCTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTTCCACAGTCACTGTTTaGTCCCCATCTAGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: LQNHPVLGPLQLERKLVPSTVTV*SPSSPA
Trigger: GGCTGGGCTAGATGGGGACAAAACAGTGACTGTGGA...AGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp GTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATCTGGACAACACCCTGTaGGACGCTTGCTCCCACCCA +
Preference number: 5 (lower is better)
Translates to: VLGPLQLERKLVPLPDLNLDNTL*DACSHP
Trigger: TGGGTGGGAGCAAGCGTCCAACAGGGTGTTGTCCAG...ATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AAGGATCAACTGTCCTGCAGAGGAGGGGCTAGCACAGTTCTTTCTGTAACAGGCCTGGACAACACCCTGTaGGACGCTTGCTCCCACCCA +
Preference number: 5 (lower is better)
Translates to: KDQLSCRGGASTVLSVTGLDNTL*DACSHP
Trigger: TGGGTGGGAGCAAGCGTCCAACAGGGTGTTGTCCAG...GCCTGTTACAGAAAGAACTGTGCTAGCCCCTCCTCTGCAGGACAGTTGATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CAA 90 bp CCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACGGCGCTTCCACCAGGAAGTGCTaGAACAGCATCTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: PLSQYQSPSGVPAGENGASTRKC*NSISIL
Trigger: CAAGATGGAGATGCTGTTCAAGCACTTCCTGGTGGA...AGCGCCGTTCTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGCTGCCCCCAAGCCAGTaGGGGTTGGAAGATAACTGT +
Preference number: 5 (lower is better)
Translates to: NCQPLSQYQSPSGVPAGELPPSQ*GLEDNC
Trigger: ACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAG...CTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCATCTGAACAGTGGAGCTaGGCCCATTCTGTACATCTC +
Preference number: 5 (lower is better)
Translates to: PLSCPQASWGWKITVSHSSEQWS*AHSVHL
Trigger: GAGATGTACAGAATGGGCCAAGCTCCACTGTTCAGA...TGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp GAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCTCTGAACAGTGGAGCTaGGCCCATTCTGTACATCTC +
Preference number: 5 (lower is better)
Translates to: EPSSVGASPAGKEAGTSTSEQWS*AHSVHL
Trigger: GAGATGTACAGAATGGGCCAAGCTCCACTGTTCAGA...GGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp TCTGACATCCTGGGGTGCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCGAAGGAACCATTTTGTaGGGGCTGATAGCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: SDILGCFLEASLGPMPFTEGTIL*GLIAWL
Trigger: CAGCCAGGCTATCAGCCCCAACAAAATGGTTCCTTC...GGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CAA 90 bp CCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCTCCAAACCCCCAATACCTATGCTTTGCAGCGGTaGCAGCGCAAAGGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: PKGHIILPGSGCLQTPNTYALQR*QRKGPD
Trigger: ATCTGGCCCTTTGCGCTGCAACCGCTGCAAAGCATA...GGTATTGGGGGTTTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp GGTGATGAGCGTGTCACGAACAGCCTTCACAGGGCTATTCAGGACTCCCCGATAGGACACATGTATGCTTaGCAGCGGTTGCAGCGCAAA +
Preference number: 5 (lower is better)
Translates to: GDERVTNSLHRAIQDSPIGHMYA*QRLQRK
Trigger: TTTGCGCTGCAACCGCTGCAAAGCATACATGTGTCC...TATCGGGGAGTCCTGAATAGCCCTGTGAAGGCTGTTCGTGACACGCTCATCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CAA 90 bp AGAAGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGACTGCCCGAGACTCATaGACGTTGACCAGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: RSSVSRGSSEWDVNWLCETARDS*TLTRKP
Trigger: TGGCTTCCTGGTCAACGTCAATGAGTCTCGGGCAGT...CTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTGCTCCGCTCTCTTCATaGAGCCGATCGTCATGCTTG +
Preference number: 5 (lower is better)
Translates to: LTTFLSTTYGLYPSSCAPAPLSS*SRSSCL
Trigger: CAAGCATGACGATCGGCTCAATGAAGAGAGCGGAGC...AGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp TGCATGAAGGGACACATGTATGCTTTGCAGCGGTTGCAGCGCAAAGGGCCAGATGCTCCGCTCTCTTCATaGAGCCGATCGTCATGCTTG +
Preference number: 5 (lower is better)
Translates to: CMKGHMYALQRLQRKGPDAPLSS*SRSSCL
Trigger: CAAGCATGACGATCGGCTCAATGAAGAGAGCGGAGC...ATCTGGCCCTTTGCGCTGCAACCGCTGCAAAGCATACATGTGTCCCTTCATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CAA 90 bp GGTAGAATGAGGGAACAGGGGCACCTTCCATCAGCAGGACATGACAGAGTGGCAAAGGGACACATAATATaGCCAGGGTCTGGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: GRMREQGHLPSAGHDRVAKGHII*PGSGCL
Trigger: GAGGCACCCAGACCCTGGCAATATTATGTGTCCCTT...TGCCACTCTGTCATGTCCTGCTGATGGAAGGTGCCCCTGTTCCCTCATTCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTATATGTTTTATCCCTACCTGCCCCTCTCCTCTaGGGAGACTGGTCCAAAGGG +
Preference number: 5 (lower is better)
Translates to: PPPMGYTPALVHLYVLSLPAPLL*GDWSKG
Trigger: CCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGG...TAGGGATAAAACATATAGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CTAGCCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCAAGTGATCATCAATCATaGCAGGAGAGAGCGAGCGAG +
Preference number: 5 (lower is better)
Translates to: LALVLPPSQLGLEDNCQPSDHQS*QERASE
Trigger: CTCGCTCGCTCTCTCCTGCAATGATTGATGATCACT...TGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGGCTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATCCACGGAGTGATCATCAACAGAACCATCCAGTGTaGGGGCCTCTCCAGCTGGAA +
Preference number: 5 (lower is better)
Translates to: SSPVTSDSVPLYPRSDHQQNHPV*GPLQLE
Trigger: TTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTG...TTGATGATCACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CTCTGCCTCTCTCCCCAACAACCCCGGGCCTGGAGAAGCAGTGTTTCTCGTGGGGAAAGCATTCCCAATTaGATCTCACCTTATCAGACA +
Preference number: 5 (lower is better)
Translates to: LCLSPQQPRAWRSSVSRGESIPN*ISPYQT
Trigger: TGTCTGATAAGGTGAGATCAAATTGGGAATGCTTTC...CCCACGAGAAACACTGCTTCTCCAGGCCCGGGGTTGTTGGGGAGAGAGGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000339365.2
CDS-3UTR CAA 90 bp CTAGCCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCAATTCTGTACATCTCCTaGGCCAAACTGGCCATATGC +
Preference number: 5 (lower is better)
Translates to: LALVLPPSQLGLEDNCQPILYIS*AKLAIC
Trigger: GCATATGGCCAGTTTGGCCAAGGAGATGTACAGAAT...TGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp TGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGAAGGAACCATTTTGTaGGGGCTGATAGCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: CLPLSSWETGPKGHIILPEGTIL*GLIAWL
Trigger: CAGCCAGGCTATCAGCCCCAACAAAATGGTTCCTTC...TGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGGAAGGAACCATTTTGTaGGGGCTGATAGCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: LLLGDWSKGTHNIARVWVEGTIL*GLIAWL
Trigger: CAGCCAGGCTATCAGCCCCAACAAAATGGTTCCTTC...CACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCTCCAAACCCCCAATACCTCCGAAGGAACCATTTaGTTGGGGCTGATAGCCTGG +
Preference number: 5 (lower is better)
Translates to: PKGHIILPGSGCLQTPNTSEGTI*LGLIAW
Trigger: CCAGGCTATCAGCCCCAACAAAATGGTTCCTTCGGA...GGTATTGGGGGTTTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AGAAGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGTCCGAAGGAACCATTTaGTTGGGGCTGATAGCCTGG +
Preference number: 5 (lower is better)
Translates to: RSSVSRGSSEWDVNWLCESEGTI*LGLIAW
Trigger: CCAGGCTATCAGCCCCAACAAAATGGTTCCTTCGGA...CTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp GGTAGAATGAGGGAACAGGGGCACCTTCCATCAGCAGGACATGACAGAGTGGCAGGATGTATCGGGGACTaGCATTCCCTTGGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: GRMREQGHLPSAGHDRVAGCIGD*HSLGLS
Trigger: TGAAAGACCAAGGGAATGCAAGTCCCCGATACATCC...TGCCACTCTGTCATGTCCTGCTGATGGAAGGTGCCCCTGTTCCCTCATTCTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp TCAAAGCCAACAACCTTCTGGACATCACGACGCAGGTCACTCAGGAACCGCTCCGGATGTATCGGGGACTaGCATTCCCTTGGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: SKPTTFWTSRRRSLRNRSGCIGD*HSLGLS
Trigger: TGAAAGACCAAGGGAATGCAAGTCCCCGATACATCC...GGAGCGGTTCCTGAGTGACCTGCGTCGTGATGTCCAGAAGGTTGTTGGCTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CAA 90 bp AGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATCCACGGAGTGATCATCAATATGCTTTGCAGCGGTaGCAGCGCAAAGGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: SSPVTSDSVPLYPRSDHQYALQR*QRKGPD
Trigger: ATCTGGCCCTTTGCGCTGCAACCGCTGCAAAGCATA...TTGATGATCACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AGAAACTTGACTGCTAACCTCCAGGCCCAAGAAGGACTGACCACTTTTCTCTCCCAAAGCCAACGCGGATaGCTGACTCTTCTGCCCCAC +
Preference number: 5 (lower is better)
Translates to: RNLTANLQAQEGLTTFLSQSQRG*LTLLPH
Trigger: GTGGGGCAGAAGAGTCAGCAATCCGCGTTGGCTTTG...GGAGAGAAAAGTGGTCAGTCCTTCTTGGGCCTGGAGGTTAGCAGTCAAGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTATTGCGAGACTCATTGACGTaGACCAGGAAGCCATCCAGC +
Preference number: 5 (lower is better)
Translates to: SVSRGSSEWDVNWLCEVLRDSLT*TRKPSS
Trigger: GCTGGATGGCTTCCTGGTCAACGTCAATGAGTCTCG...CAATACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CAAGAAGGACTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTACTGCCCGAGACTCATaGACGTTGACCAGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: QEGLTTFLSTTYGLYPSSTARDS*TLTRKP
Trigger: TGGCTTCCTGGTCAACGTCAATGAGTCTCGGGCAGT...AGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAGTCCTTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTATATGTTTTATCCCTACACGGATACCAGTGCTaGTCCGGACCCGCATCACAG +
Preference number: 5 (lower is better)
Translates to: PPPMGYTPALVHLYVLSLHGYQC*SGPASQ
Trigger: CTGTGATGCGGGTCCGGACAAGCACTGGTATCCGTG...TAGGGATAAAACATATAGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATCCACGGAGTGATCATCAATCCACAGTCACTGTTTaGTCCCCATCTAGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: SSPVTSDSVPLYPRSDHQSTVTV*SPSSPA
Trigger: GGCTGGGCTAGATGGGGACAAAACAGTGACTGTGGA...TTGATGATCACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CAGAGTGGCAGGATACTTGAGCCCAGAAAGAAGGTGTCTCCTTATATCTCCCCCGCTCCGCTCTCTTCATaGAGCCGATCGTCATGCTTG +
Preference number: 5 (lower is better)
Translates to: QSGRILEPRKKVSPYISPAPLSS*SRSSCL
Trigger: CAAGCATGACGATCGGCTCAATGAAGAGAGCGGAGC...GGGGGAGATATAAGGAGACACCTTCTTTCTGGGCTCAAGTATCCTGCCACTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp TGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGTGAGGTATTGCAAGTaGATGACCAGGCTCCCTAGG +
Preference number: 5 (lower is better)
Translates to: CLPLSSWETGPKGHIILPVRYCK*MTRLPR
Trigger: CCTAGGGAGCCTGGTCATCAACTTGCAATACCTCAC...TGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGGTGAGGTATTGCAAGTaGATGACCAGGCTCCCTAGG +
Preference number: 5 (lower is better)
Translates to: LLLGDWSKGTHNIARVWVVRYCK*MTRLPR
Trigger: CCTAGGGAGCCTGGTCATCAACTTGCAATACCTCAC...CACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AGAAGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGCCAAGCCAGTTGGGGTaGGAAGATAACTGTCAGCCA +
Preference number: 5 (lower is better)
Translates to: RSSVSRGSSEWDVNWLCEPSQLG*EDNCQP
Trigger: TGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGG...CTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCTCCAAACCCCCAATACCCCAAGCCAGTTGGGGTaGGAAGATAACTGTCAGCCA +
Preference number: 5 (lower is better)
Translates to: PKGHIILPGSGCLQTPNTPSQLG*EDNCQP
Trigger: TGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGG...GGTATTGGGGGTTTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTGAAAGCATTCCCAATTaGATCTCACCCGGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: LQNHPVLGPLQLERKLVPESIPN*ISPGSR
Trigger: TCTGGAGCCGGGTGAGATCAAATTGGGAATGCTTTC...AGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CTCCCTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTGGTGGAACTGACTGGTaGACGTTCATTATGAAAGCA +
Preference number: 5 (lower is better)
Translates to: LPTEPSSVGASPAGKEAGGGTDW*TFIMKA
Trigger: TGCTTTCATAATGAACGTCAACCAGTCAGTTCCACC...ACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp GCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAAGACCCAGGCAGCCTTaGCATCTGAACAGTGGAGCT +
Preference number: 5 (lower is better)
Translates to: ASWGWKITVSHSVNTKAQRPRQP*HLNSGA
Trigger: AGCTCCACTGTTCAGATGCAAAGGCTGCCTGGGTCT...TTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CCAAAGGGACACATAATATTGCCAGGGTCTGGGTGCCTCCAAACCCCCAATACCGGGACTTGCATTCCCTaGGTCTTTCACCAGGAAGTT +
Preference number: 5 (lower is better)
Translates to: PKGHIILPGSGCLQTPNTGTCIP*VFHQEV
Trigger: AACTTCCTGGTGAAAGACCAAGGGAATGCAAGTCCC...GGTATTGGGGGTTTGGAGGCACCCAGACCCTGGCAATATTATGTGTCCCTTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp TCCTGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGGGATGTATCGGGGACTaGCATTCCCTTGGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: SCLPLSSWETGPKGHIILGCIGD*HSLGLS
Trigger: TGAAAGACCAAGGGAATGCAAGTCCCCGATACATCC...CAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATCCACGGAGTGATCATCAAGGACACATGTATGCTTaGCAGCGGTTGCAGCGCAAA +
Preference number: 5 (lower is better)
Translates to: SSPVTSDSVPLYPRSDHQGHMYA*QRLQRK
Trigger: TTTGCGCTGCAACCGCTGCAAAGCATACATGTGTCC...TTGATGATCACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTAAAGTCTAACAGTGACTaGAGCTCCTCACAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: SSVSRGSSEWDVNWLCEVKSNSD*SSSQRS
Trigger: GCTCCTCTGTGAGGAGCTCAAGTCACTGTTAGACTT...TACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTATATGTTTTATCCCTACAAAGCCAACGCGGATaGCTGACTCTTCTGCCCCAC +
Preference number: 5 (lower is better)
Translates to: PPPMGYTPALVHLYVLSLQSQRG*LTLLPH
Trigger: GTGGGGCAGAAGAGTCAGCAATCCGCGTTGGCTTTG...TAGGGATAAAACATATAGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTACCCAGAGGAAGAGGTaGAGCCCATTCTCCAGTAAA +
Preference number: 5 (lower is better)
Translates to: LTTFLSTTYGLYPSSCAPTQRKR*SPFSSK
Trigger: TTTACTGGAGAATGGGCTCAACCTCTTCCTCTGGGT...AGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp TGGCCCCGTACTCCAGTAACAAATGGCTCTGTACCCCGGTTGTTCCTGTCATCTACCCAGAGGAAGAGGTaGAGCCCATTCTCCAGTAAA +
Preference number: 5 (lower is better)
Translates to: WPRTPVTNGSVPRLFLSSTQRKR*SPFSSK
Trigger: TTTACTGGAGAATGGGCTCAACCTCTTCCTCTGGGT...AGATGACAGGAACAACCGGGGTACAGAGCCATTTGTTACTGGAGTACGGGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CAA 90 bp GCCTCCATAATTAGACTGAGGGCCCCGGGCTGGTCCGAAGGAACCATTTTGTTGAACAGCATCTCCATCTaGTCTTCCTGTTTCACCACG +
Preference number: 5 (lower is better)
Translates to: ASIIRLRAPGWSEGTILLNSISI*SSCFTT
Trigger: CGTGGTGAAACAGGAAGACAAGATGGAGATGCTGTT...CAACAAAATGGTTCCTTCGGACCAGCCCGGGGCCCTCAGTCTAATTATGGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CAA 90 bp AGAAGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGAGAGTGGCAGGATACTaGAGCCCAGAAAGAAGGTGT +
Preference number: 5 (lower is better)
Translates to: RSSVSRGSSEWDVNWLCERVAGY*SPERRC
Trigger: ACACCTTCTTTCTGGGCTCAAGTATCCTGCCACTCT...CTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AGAAGCAGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGAGTGATCATCAATCATaGCAGGAGAGAGCGAGCGAG +
Preference number: 5 (lower is better)
Translates to: RSSVSRGSSEWDVNWLCESDHQS*QERASE
Trigger: CTCGCTCGCTCTCTCCTGCAATGATTGATGATCACT...CTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACTGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGCCAAGCCAGTTGGGGTaGGAAGATAACTGTCAGCCA +
Preference number: 5 (lower is better)
Translates to: KITVSHSVNTKAQAVSQQPSQLG*EDNCQP
Trigger: TGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGG...CTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS CCA 90 bp TTCAGGACTCCCCGATATGCTGGATGGGAAAGCAAAGATAGTCACTaGTCAGCTGCCCATCATGTGTGCATTCCCACCATCACAACTACC +
Preference number: 5 (lower is better)
Translates to: FRTPRYAGWESKDSH*SAAHHVCIPTITTT
Trigger: GGTAGTTGTGATGGTGGGAATGCACACATGATGGGCAGCTGACCAGTGACTATCTTTGCTTTCCCATCCAGCATATCGGGGAGTCCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496827.1
CDS-3UTR CAA 90 bp TCTGACATCCTGGGGTGCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCGGTGGAACTGACTGGTaGACGTTCATTATGAAAGCA +
Preference number: 5 (lower is better)
Translates to: SDILGCFLEASLGPMPFTGGTDW*TFIMKA
Trigger: TGCTTTCATAATGAACGTCAACCAGTCAGTTCCACC...GGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGCACCCCAGGATGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CAA 90 bp TGCCTGCCCCTCTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAATTCTGTACATCTCCTaGGCCAAACTGGCCATATGC +
Preference number: 5 (lower is better)
Translates to: CLPLSSWETGPKGHIILPILYIS*AKLAIC
Trigger: GCATATGGCCAGTTTGGCCAAGGAGATGTACAGAAT...TGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAGAGGGGCAGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGATTCTGTACATCTCCTaGGCCAAACTGGCCATATGC +
Preference number: 5 (lower is better)
Translates to: LLLGDWSKGTHNIARVWVILYIS*AKLAIC
Trigger: GCATATGGCCAGTTTGGCCAAGGAGATGTACAGAAT...CACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTATTGTCTTTCACCAGGAAGTaGGTAGTGACTAAGGGTGGC +
Preference number: 5 (lower is better)
Translates to: SVSRGSSEWDVNWLCEVLSFTRK*VVTKGG
Trigger: GCCACCCTTAGTCACTACCAACTTCCTGGTGAAAGA...CAATACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp GCTTTCTGGAAGCTAGCCTGGGCCCTATGCCATTTACCCACTTGCTTTAGCTCAGGGACTTGCATTCCCTaGGTCTTTCACCAGGAAGTT +
Preference number: 5 (lower is better)
Translates to: AFWKLAWALCHLPTCFSSGTCIP*VFHQEV
Trigger: AACTTCCTGGTGAAAGACCAAGGGAATGCAAGTCCC...TGAGCTAAAGCAAGTGGGTAAATGGCATAGGGCCCAGGCTAGCTTCCAGAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CAA 90 bp GAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCAAACCACTGGTATGCTTTGCAGCGGTaGCAGCGCAAAGGGCCAGAT +
Preference number: 5 (lower is better)
Translates to: EPSWTVDYPELAEHSNHWYALQR*QRKGPD
Trigger: ATCTGGCCCTTTGCGCTGCAACCGCTGCAAAGCATA...CCAGTGGTTTGAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CAA 90 bp GTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATAAGTCTAACAGTGACTaGAGCTCCTCACAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: VLGPLQLERKLVPLPDLNKSNSD*SSSQRS
Trigger: GCTCCTCTGTGAGGAGCTCAAGTCACTGTTAGACTT...ATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTATTGAAGTCTAACAGTGACTaGAGCTCCTCACAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: SVSRGSSEWDVNWLCEVLKSNSD*SSSQRS
Trigger: GCTCCTCTGTGAGGAGCTCAAGTCACTGTTAGACTT...CAATACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CTAGCCCTTGTCCTGCCCCCAAGCCAGTTGGGGTTGGAAGATAACTGTCAGCCATTCTCCTTGTCTGTATaGATCAGCTTCCTGTCATCT +
Preference number: 5 (lower is better)
Translates to: LALVLPPSQLGLEDNCQPFSLSV*ISFLSS
Trigger: AGATGACAGGAAGCTGATCAATACAGACAAGGAGAA...TGGCTGACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAGGACAAGGGCTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CTCCCTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTTTCTCCTTGTCTGTATaGATCAGCTTCCTGTCATCT +
Preference number: 5 (lower is better)
Translates to: LPTEPSSVGASPAGKEAGFSLSV*ISFLSS
Trigger: AGATGACAGGAAGCTGATCAATACAGACAAGGAGAA...ACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CAAGAAGGACTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTACCCAGAGGAAGAGGTaGAGCCCATTCTCCAGTAAA +
Preference number: 5 (lower is better)
Translates to: QEGLTTFLSTTYGLYPSSTQRKR*SPFSSK
Trigger: TTTACTGGAGAATGGGCTCAACCTCTTCCTCTGGGT...AGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAGTCCTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATCCACGGAGTGATCATCAATCCACCAGGAAGTGCTaGAACAGCATCTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: SSPVTSDSVPLYPRSDHQSTRKC*NSISIL
Trigger: CAAGATGGAGATGCTGTTCAAGCACTTCCTGGTGGA...TTGATGATCACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AGTGTTTCTCGTGGGAGCTCAGAGTGGGATGTGAACTGGCTCTGTGAGGTATTGAGAGTGGCAGGATACTaGAGCCCAGAAAGAAGGTGT +
Preference number: 5 (lower is better)
Translates to: SVSRGSSEWDVNWLCEVLRVAGY*SPERRC
Trigger: ACACCTTCTTTCTGGGCTCAAGTATCCTGCCACTCT...CAATACCTCACAGAGCCAGTTCACATCCCACTCTGAGCTCCCACGAGAAACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CTCCCTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTGCTATACCCCAGCTCTaGTGCACCTATATGTTTTAT +
Preference number: 5 (lower is better)
Translates to: LPTEPSSVGASPAGKEAGAIPQL*CTYMFY
Trigger: ATAAAACATATAGGTGCACAAGAGCTGGGGTATAGC...ACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTATATGTTTTATCCCTACTGCCCCCAAGCCAGTaGGGGTTGGAAGATAACTGT +
Preference number: 5 (lower is better)
Translates to: PPPMGYTPALVHLYVLSLLPPSQ*GLEDNC
Trigger: ACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAG...TAGGGATAAAACATATAGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp TGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTCCGAAGGAACCATTTaGTTGGGGCTGATAGCCTGG +
Preference number: 5 (lower is better)
Translates to: WGLSSWKGSWYLYQILIYSEGTI*LGLIAW
Trigger: CCAGGCTATCAGCCCCAACAAAATGGTTCCTTCGGA...ATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTATATGTTTTATCCCTAGGCTCTGTACCCCGGTaGTTCCTGTCATCTTCAATG +
Preference number: 5 (lower is better)
Translates to: PPPMGYTPALVHLYVLSLGSVPR*FLSSSM
Trigger: CATTGAAGATGACAGGAACAACCGGGGTACAGAGCC...TAGGGATAAAACATATAGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp GAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCAAACCACTGGGGCTCTGTACCCCGGTaGTTCCTGTCATCTTCAATG +
Preference number: 5 (lower is better)
Translates to: EPSWTVDYPELAEHSNHWGSVPR*FLSSSM
Trigger: CATTGAAGATGACAGGAACAACCGGGGTACAGAGCC...CCAGTGGTTTGAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CAA 90 bp ATGAGGCCTCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCAAGTCTAACAGTGACTaGAGCTCCTCACAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: MRPRTFLDSGLSRTGRTLKSNSD*SSSQRS
Trigger: GCTCCTCTGTGAGGAGCTCAAGTCACTGTTAGACTT...GAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCCTCAT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CAA 90 bp CTACAGAACCATCCAGTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTTTCTCCTTGTCTGTATaGATCAGCTTCCTGTCATCT +
Preference number: 5 (lower is better)
Translates to: LQNHPVLGPLQLERKLVPFSLSV*ISFLSS
Trigger: AGATGACAGGAAGCTGATCAATACAGACAAGGAGAA...AGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACACTGGATGGTTCTGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAACAGAGTCTTCTCCTaGTCTGTATTGATCAGCTTC +
Preference number: 5 (lower is better)
Translates to: NCQPLSQYQSPSGVPAGENRVFS*SVLISF
Trigger: GAAGCTGATCAATACAGACAAGGAGAAGACTCTGTT...CTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp TGCCATTTACCCACTTGCTTTAGCTCAGTAGCTGCCGAATCTCCTTGTGCATATTCCACAGTCACTGTTTaGTCCCCATCTAGCCCAGCC +
Preference number: 5 (lower is better)
Translates to: CHLPTCFSSVAAESPCAYSTVTV*SPSSPA
Trigger: GGCTGGGCTAGATGGGGACAAAACAGTGACTGTGGA...ATATGCACAAGGAGATTCGGCAGCTACTGAGCTAAAGCAAGTGGGTAAATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CAA 90 bp GCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAAGCCGATCGTCATGCTaGAACTCCACAGTCACTGTT +
Preference number: 5 (lower is better)
Translates to: ASWGWKITVSHSVNTKAQSRSSC*NSTVTV
Trigger: AACAGTGACTGTGGAGTTCAAGCATGACGATCGGCT...TTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AGGGTCTGGGTGCCTCCAAACCCCCAATACCGAATCATATACAGTGAACTGAGAAGCCGATCGTCATGCTaGAACTCCACAGTCACTGTT +
Preference number: 5 (lower is better)
Translates to: RVWVPPNPQYRIIYSELRSRSSC*NSTVTV
Trigger: AACAGTGACTGTGGAGTTCAAGCATGACGATCGGCT...TCTCAGTTCACTGTATATGATTCGGTATTGGGGGTTTGGAGGCACCCAGACCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp GTATGGAATAGAAAGAGCTTCCCTGCACACTCAGCAGCCTTCAGAGCCTCCATTAGCCGATCGTCATGCTaGAACTCCACAGTCACTGTT +
Preference number: 5 (lower is better)
Translates to: VWNRKSFPAHSAAFRASISRSSC*NSTVTV
Trigger: AACAGTGACTGTGGAGTTCAAGCATGACGATCGGCT...AATGGAGGCTCTGAAGGCTGCTGAGTGTGCAGGGAAGCTCTTTCTATTCCATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CAA 90 bp AGTTCTCCGGTCACCTCTGACAGTGTGCCTCTCTATCCACGGAGTGATCATCAAAACAGCATCTCCATCTaGTCTTCCTGTTTCACCACG +
Preference number: 5 (lower is better)
Translates to: SSPVTSDSVPLYPRSDHQNSISI*SSCFTT
Trigger: CGTGGTGAAACAGGAAGACAAGATGGAGATGCTGTT...TTGATGATCACTCCGTGGATAGAGAGGCACACTGTCAGAGGTGACCGGAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGGCTATACCCCAGCTCTaGTGCACCTATATGTTTTAT +
Preference number: 5 (lower is better)
Translates to: NCQPLSQYQSPSGVPAGEAIPQL*CTYMFY
Trigger: ATAAAACATATAGGTGCACAAGAGCTGGGGTATAGC...CTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp ATGAGGCCTCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAACACTCGAAAGCATTCCCAATTaGATCTCACCCGGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: MRPRTFLDSGLSRTGRTLESIPN*ISPGSR
Trigger: TCTGGAGCCGGGTGAGATCAAATTGGGAATGCTTTC...GAGTGTTCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CAA 90 bp CAGATGTGCAAGGGATATTATAGGATGTACATCGGATGTATCGGGGACTTGCATGAGACCCAGGCAGCCTaGGGGAGGTGTTTGCTGATA +
Preference number: 5 (lower is better)
Translates to: QMCKGYYRMYIGCIGDLHETQAA*GRCLLI
Trigger: TATCAGCAAACACCTCCCCAAGGCTGCCTGGGTCTC...ATGCAAGTCCCCGATACATCCGATGTACATCCTATAATATCCCTTGCACATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS GCA 90 bp TGTTTCACAAAGTATACTTCCACACCCATATTCTCCTTGACTCCCTaGCCTCACCAAACCACTGGTGATCTGACTGAAGGAGGAGACGCT +
Preference number: 5 (lower is better)
Translates to: CFTKYTSTPIFSLTP*PHQTTGDLTEGGDA
Trigger: AGCGTCTCCTCCTTCAGTCAGATCACCAGTGGTTTGGTGAGGGCAGGGAGTCAAGGAGAATATGGGTGTGGAAGTATACTTTGTGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465076.5
CDS-3UTR CAA 90 bp CCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTTTGCAGACCCAGGCAGCCTTaGCATCTGAACAGTGGAGCT +
Preference number: 5 (lower is better)
Translates to: PLQLERKLVPLPDLNIFCRPRQP*HLNSGA
Trigger: AGCTCCACTGTTCAGATGCAAAGGCTGCCTGGGTCT...GCAAAATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp TATAGGATGTACATCGGATGTATCGGGGACTTGCATTCCCTTGGTCTTTCACCATCCGAAGGAACCATTTaGTTGGGGCTGATAGCCTGG +
Preference number: 5 (lower is better)
Translates to: YRMYIGCIGDLHSLGLSPSEGTI*LGLIAW
Trigger: CCAGGCTATCAGCCCCAACAAAATGGTTCCTTCGGA...TGGTGAAAGACCAAGGGAATGCAAGTCCCCGATACATCCGATGTACATCCTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CAA 90 bp TGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATGGGACTTGCATTCCCTaGGTCTTTCACCAGGAAGTT +
Preference number: 5 (lower is better)
Translates to: WGLSSWKGSWYLYQILIYGTCIP*VFHQEV
Trigger: AACTTCCTGGTGAAAGACCAAGGGAATGCAAGTCCC...ATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTATATGTTTTATCCCTAGGATGTATCGGGGACTaGCATTCCCTTGGTCTTTCA +
Preference number: 5 (lower is better)
Translates to: PPPMGYTPALVHLYVLSLGCIGD*HSLGLS
Trigger: TGAAAGACCAAGGGAATGCAAGTCCCCGATACATCC...TAGGGATAAAACATATAGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTTTGCCGAGACTCATTGACGTaGACCAGGAAGCCATCCAGC +
Preference number: 5 (lower is better)
Translates to: PLQLERKLVPLPDLNIFCRDSLT*TRKPSS
Trigger: GCTGGATGGCTTCCTGGTCAACGTCAATGAGTCTCG...GCAAAATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGCGGTGTCCCAGCAGGAGAGAAATATATATCCCCATaGCTTAGACGCTCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: NCQPLSQYQSPSGVPAGEKYISP*LRRSSE
Trigger: CTCTGAAGAGCGTCTAAGCAATGGGGATATATATTT...CTCTCCTGCTGGGACACCGCTTGGGCTTTGGTATTGACTGAGTGGCTGACAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp AGAAACTTGACTGCTAACCTCCAGGCCCAAGAAGGACTGACCACTTTTCTCTCCAACAGCATCTCCATCTaGTCTTCCTGTTTCACCACG +
Preference number: 5 (lower is better)
Translates to: RNLTANLQAQEGLTTFLSNSISI*SSCFTT
Trigger: CGTGGTGAAACAGGAAGACAAGATGGAGATGCTGTT...GGAGAGAAAAGTGGTCAGTCCTTCTTGGGCCTGGAGGTTAGCAGTCAAGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp TGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTCCACCAGGAAGTGCTaGAACAGCATCTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: WGLSSWKGSWYLYQILIYSTRKC*NSISIL
Trigger: CAAGATGGAGATGCTGTTCAAGCACTTCCTGGTGGA...ATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CTCCTCTTGGGAGACTGGTCCAAAGGGACACATAATATTGCCAGGGTCTGGGTGGCTATACCCCAGCTCTaGTGCACCTATATGTTTTAT +
Preference number: 5 (lower is better)
Translates to: LLLGDWSKGTHNIARVWVAIPQL*CTYMFY
Trigger: ATAAAACATATAGGTGCACAAGAGCTGGGGTATAGC...CACCCAGACCCTGGCAATATTATGTGTCCCTTTGGACCAGTCTCCCAAGAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CCACCACCTATGGGCTATACCCCAGCTCTTGTGCACCTATATGTTTTATCCCTAAGTGATCATCAATCATaGCAGGAGAGAGCGAGCGAG +
Preference number: 5 (lower is better)
Translates to: PPPMGYTPALVHLYVLSLSDHQS*QERASE
Trigger: CTCGCTCGCTCTCTCCTGCAATGATTGATGATCACT...TAGGGATAAAACATATAGGTGCACAAGAGCTGGGGTATAGCCCATAGGTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTTTGCCTGCCCCCAAGCCAGTaGGGGTTGGAAGATAACTGT +
Preference number: 5 (lower is better)
Translates to: PLQLERKLVPLPDLNIFCLPPSQ*GLEDNC
Trigger: ACAGTTATCTTCCAACCCCAACTGGCTTGGGGGCAG...GCAAAATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp TGTCTGAGGCTGGAACAGAGTCTTCTCCTTGTCTGTATTGATCAGCTTCCTGTCGAAAGCATTCCCAATTaGATCTCACCCGGCTCCAGA +
Preference number: 5 (lower is better)
Translates to: CLRLEQSLLLVCIDQLPVESIPN*ISPGSR
Trigger: TCTGGAGCCGGGTGAGATCAAATTGGGAATGCTTTC...GACAGGAAGCTGATCAATACAGACAAGGAGAAGACTCTGTTCCAGCCTCAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CAA 90 bp GCCAGTTGGGGTTGGAAGATAACTGTCAGCCACTCAGTCAATACCAAAGCCCAAGGTGGAACTGACTGGTaGACGTTCATTATGAAAGCA +
Preference number: 5 (lower is better)
Translates to: ASWGWKITVSHSVNTKAQGGTDW*TFIMKA
Trigger: TGCTTTCATAATGAACGTCAACCAGTCAGTTCCACC...TTGGGCTTTGGTATTGACTGAGTGGCTGACAGTTATCTTCCAACCCCAACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CCTCCAAACCCCCAATACCGAATCATATACAGTGAACTGAGAAGCTACATTCATAGACCCAGGCAGCCTTaGCATCTGAACAGTGGAGCT +
Preference number: 5 (lower is better)
Translates to: PPNPQYRIIYSELRSYIHRPRQP*HLNSGA
Trigger: AGCTCCACTGTTCAGATGCAAAGGCTGCCTGGGTCT...ATGAATGTAGCTTCTCAGTTCACTGTATATGATTCGGTATTGGGGGTTTGGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTTTGCGGCTCTGTACCCCGGTaGTTCCTGTCATCTTCAATG +
Preference number: 5 (lower is better)
Translates to: PLQLERKLVPLPDLNIFCGSVPR*FLSSSM
Trigger: CATTGAAGATGACAGGAACAACCGGGGTACAGAGCC...GCAAAATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CTTGTGCATATGACAGAGAAAGTCCACATAAGATGCTCCCCCACTCAGACTCTTTCTTTCACCAGGAAGTaGGTAGTGACTAAGGGTGGC +
Preference number: 5 (lower is better)
Translates to: LVHMTEKVHIRCSPTQTLSFTRK*VVTKGG
Trigger: GCCACCCTTAGTCACTACCAACTTCCTGGTGAAAGA...AAGAGTCTGAGTGGGGGAGCATCTTATGTGGACTTTCTCTGTCATATGCACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CAA 90 bp TATAGGATGTACATCGGATGTATCGGGGACTTGCATTCCCTTGGTCTTTCACCATCTTTCACCAGGAAGTaGGTAGTGACTAAGGGTGGC +
Preference number: 5 (lower is better)
Translates to: YRMYIGCIGDLHSLGLSPSFTRK*VVTKGG
Trigger: GCCACCCTTAGTCACTACCAACTTCCTGGTGAAAGA...TGGTGAAAGACCAAGGGAATGCAAGTCCCCGATACATCCGATGTACATCCTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CAA 90 bp GCAGGGATGTATGGAATAGAAAGAGCTTCCCTGCACACTCAGCAGCCTTCAGAGAACAGAGTCTTCTCCTaGTCTGTATTGATCAGCTTC +
Preference number: 5 (lower is better)
Translates to: AGMYGIERASLHTQQPSENRVFS*SVLISF
Trigger: GAAGCTGATCAATACAGACAAGGAGAAGACTCTGTT...CTCTGAAGGCTGCTGAGTGTGCAGGGAAGCTCTTTCTATTCCATACATCCCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CAA 90 bp CTTGTGCATATGACAGAGAAAGTCCACATAAGATGCTCCCCCACTCAGACTCTTTCCACCAGGAAGTGCTaGAACAGCATCTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: LVHMTEKVHIRCSPTQTLSTRKC*NSISIL
Trigger: CAAGATGGAGATGCTGTTCAAGCACTTCCTGGTGGA...AAGAGTCTGAGTGGGGGAGCATCTTATGTGGACTTTCTCTGTCATATGCACAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CAA 90 bp TGCTTTAGCTCAGTAGCTGCCGAATCTCCTTGTGCATATGACAGAGAAAGTCCAAGAGTGGCAGGATACTaGAGCCCAGAAAGAAGGTGT +
Preference number: 5 (lower is better)
Translates to: CFSSVAAESPCAYDRESPRVAGY*SPERRC
Trigger: ACACCTTCTTTCTGGGCTCAAGTATCCTGCCACTCT...TGGACTTTCTCTGTCATATGCACAAGGAGATTCGGCAGCTACTGAGCTAAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465076.5
CDS-3UTR CAA 90 bp CTATCAATGAGGCCTCGAACCTTCTTGGACAGTGGATTATCCAGAACTGGCAGAGGTGGAACTGACTGGTaGACGTTCATTATGAAAGCA +
Preference number: 5 (lower is better)
Translates to: LSMRPRTFLDSGLSRTGRGGTDW*TFIMKA
Trigger: TGCTTTCATAATGAACGTCAACCAGTCAGTTCCACC...TCTGCCAGTTCTGGATAATCCACTGTCCAAGAAGGTTCGAGGCCTCATTGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CAA 90 bp GTATGGAATAGAAAGAGCTTCCCTGCACACTCAGCAGCCTTCAGAGCCTCCATTTTCTCCTTGTCTGTATaGATCAGCTTCCTGTCATCT +
Preference number: 5 (lower is better)
Translates to: VWNRKSFPAHSAAFRASIFSLSV*ISFLSS
Trigger: AGATGACAGGAAGCTGATCAATACAGACAAGGAGAA...AATGGAGGCTCTGAAGGCTGCTGAGTGTGCAGGGAAGCTCTTTCTATTCCATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CAA 90 bp CCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTTTGCAGCCGATCGTCATGCTaGAACTCCACAGTCACTGTT +
Preference number: 5 (lower is better)
Translates to: PLQLERKLVPLPDLNIFCSRSSC*NSTVTV
Trigger: AACAGTGACTGTGGAGTTCAAGCATGACGATCGGCT...GCAAAATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CAAGAAGGACTGACCACTTTTCTCTCCACCACCTATGGGCTATACCCCAGCTCTAAATATATATCCCCATaGCTTAGACGCTCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: QEGLTTFLSTTYGLYPSSKYISP*LRRSSE
Trigger: CTCTGAAGAGCGTCTAAGCAATGGGGATATATATTT...AGAGCTGGGGTATAGCCCATAGGTGGTGGAGAGAAAAGTGGTCAGTCCTTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp GTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATAAATATATATCCCCATaGCTTAGACGCTCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: VLGPLQLERKLVPLPDLNKYISP*LRRSSE
Trigger: CTCTGAAGAGCGTCTAAGCAATGGGGATATATATTT...ATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp CCTCCAAACCCCCAATACCGAATCATATACAGTGAACTGAGAAGCTACATTCATAAGGGACACATAATATaGCCAGGGTCTGGGTGCCTC +
Preference number: 5 (lower is better)
Translates to: PPNPQYRIIYSELRSYIHKGHII*PGSGCL
Trigger: GAGGCACCCAGACCCTGGCAATATTATGTGTCCCTT...ATGAATGTAGCTTCTCAGTTCACTGTATATGATTCGGTATTGGGGGTTTGGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS-3UTR CAA 90 bp GTGTTGGGGCCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATAGCACACTAACTATATaGGCTCCCAATTGTTTCACA +
Preference number: 5 (lower is better)
Translates to: VLGPLQLERKLVPLPDLNSTLTI*APNCFT
Trigger: TGTGAAACAATTGGGAGCCAATATAGTTAGTGTGCT...ATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGGCCCCAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465076.5
CDS-3UTR CAA 90 bp GTATGGAATAGAAAGAGCTTCCCTGCACACTCAGCAGCCTTCAGAGCCTCCATTAAATATATATCCCCATaGCTTAGACGCTCTTCAGAG +
Preference number: 5 (lower is better)
Translates to: VWNRKSFPAHSAAFRASIKYISP*LRRSSE
Trigger: CTCTGAAGAGCGTCTAAGCAATGGGGATATATATTT...AATGGAGGCTCTGAAGGCTGCTGAGTGTGCAGGGAAGCTCTTTCTATTCCATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS-3UTR CAA 90 bp TGCTTTAGCTCAGTAGCTGCCGAATCTCCTTGTGCATATGACAGAGAAAGTCCAAACAGAGTCTTCTCCTaGTCTGTATTGATCAGCTTC +
Preference number: 5 (lower is better)
Translates to: CFSSVAAESPCAYDRESPNRVFS*SVLISF
Trigger: GAAGCTGATCAATACAGACAAGGAGAAGACTCTGTT...TGGACTTTCTCTGTCATATGCACAAGGAGATTCGGCAGCTACTGAGCTAAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000465076.5
ENST00000635550.1
CDS-3UTR CAA 90 bp CCTCTCCAGCTGGAAAGGAAGCTGGTACCTCTACCAGATCTTAATATATTTTGCAACAGAGTCTTCTCCTaGTCTGTATTGATCAGCTTC +
Preference number: 5 (lower is better)
Translates to: PLQLERKLVPLPDLNIFCNRVFS*SVLISF
Trigger: GAAGCTGATCAATACAGACAAGGAGAAGACTCTGTT...GCAAAATATATTAAGATCTGGTAGAGGTACCAGCTTCCTTTCCAGCTGGAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS TCA 90 bp GAAGATGTATGTCTAGTAAAGCAAGAAACTCAAGTTCACAGAAAATaGAGAATATGCAAAGGAACCCAGGTACTAAGATGGGTCAATAAT +
Preference number: 5 (lower is better)
Translates to: EDVCLVKQETQVHRK*RICKGTQVLRWVNN
Trigger: ATTATTGACCCATCTTAGTACCTGGGTTCCTTTGCATATTCTTCATTTTCTGTGAACTTGAGTTTCTTGCTTTACTAGACATACATCTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477008.1
CDS GCA 72 bp GGGGCCACAGCACCGCTGATCTGCATTCCAGACAGCTaGGTAGCCACCTGTGCACTTGTCGGGGGAGGGCCA +
Preference number: 6 (lower is better)
Translates to: GATAPLICIPDS*VATCALVGGGP
Trigger: TGGCCCTCCCCCGACAAGTGCACAGGTGGCTACGCAGCTGTCTGGAATGCAGATCAGCGGTGCTGTGGCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000635550.1
CDS CAA 90 bp GGCCAAACTGGCCATATGCAGCCTGGCCACAAGGAGCCTGTGCTGTaGAGGCTGGAGGTGCCCCCGAGGAAGGTGGGGCTCTTGACATAC +
Preference number: 6 (lower is better)
Translates to: GQTGHMQPGHKEPVL*RLEVPPRKVGLLTY
Trigger: GTATGTCAAGAGCCCCACCTTCCTCGGGGGCACCTCCAGCCTCAACAGCACAGGCTCCTTGTGGCCAGGCTGCATATGGCCAGTTTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000477008.1
CDS CCA 72 bp TGGCGGGGGCTGTGGACCCTGATTGCCCACCATAGCTaGACTGATGATACCCTGGGTAGATGGGCTGGGGCT +
Preference number: 6 (lower is better)
Translates to: WRGLWTLIAHHS*TDDTLGRWAGA
Trigger: AGCCCCAGCCCATCTACCCAGGGTATCATCAGTCCAGCTATGGTGGGCAATCAGGGTCCACAGCCCCCGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000477008.1
ENST00000635550.1
CDS GCA 72 bp GCTGATCTGCATTCCAGACAGCTGCGTAGCCACCTGTaGACTTGTCGGGGGAGGGCCATAGGGCTGAAGCAC +
Preference number: 6 (lower is better)
Translates to: ADLHSRQLRSHL*TCRGRAIGLKH
Trigger: GTGCTTCAGCCCTATGGCCCTCCCCCGACAAGTGCACAGGTGGCTACGCAGCTGTCTGGAATGCAGATCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000635550.1
CDS CCA 72 bp AGCCTGGTACTGGGCCATTGTAGGCTCCATAGGGAATaGCGGGGGCTGTGGACCCTGATTGCCCACCATAGC +
Preference number: 6 (lower is better)
Translates to: SLVLGHCRLHRE*RGLWTLIAHHS
Trigger: GCTATGGTGGGCAATCAGGGTCCACAGCCCCCGCCATTCCCTATGGAGCCTACAATGGCCCAGTACCAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000477008.1
ENST00000635550.1
CDS CCA 72 bp GCAGCCTTGGGGAGGTGTTTGCTGATAGCCTGGTACTaGGCCATTGTAGGCTCCATAGGGAATGGCGGGGGC +
Preference number: 6 (lower is better)
Translates to: AALGRCLLIAWY*AIVGSIGNGGG
Trigger: GCCCCCGCCATTCCCTATGGAGCCTACAATGGCCCAGTACCAGGCTATCAGCAAACACCTCCCCAAGGCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS TCA 72 bp GTAGGCTCCATAGGGAATGGCGGGGGCTGTGGACCCTaGTTGCCCACCATAGCTGGACTGATGATACCCTGG +
Preference number: 6 (lower is better)
Translates to: VGSIGNGGGCGP*LPTIAGLMIPW
Trigger: CCAGGGTATCATCAGTCCAGCTATGGTGGGCAATCAGGGTCCACAGCCCCCGCCATTCCCTATGGAGCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000477008.1
ENST00000635550.1
CDS CCA 72 bp GCCCACCATAGCTGGACTGATGATACCCTGGGTAGATaGGCTGGGGCTGCCCAAATGGTGGCACAGGTGGAA +
Preference number: 6 (lower is better)
Translates to: AHHSWTDDTLGR*AGAAQMVAQVE
Trigger: TTCCACCTGTGCCACCATTTGGGCAGCCCCAGCCCATCTACCCAGGGTATCATCAGTCCAGCTATGGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000635550.1
CDS CCA 72 bp GGCCATTGTAGGCTCCATAGGGAATGGCGGGGGCTGTaGACCCTGATTGCCCACCATAGCTGGACTGATGAT +
Preference number: 6 (lower is better)
Translates to: GHCRLHREWRGL*TLIAHHSWTDD
Trigger: ATCATCAGTCCAGCTATGGTGGGCAATCAGGGTCCACAGCCCCCGCCATTCCCTATGGAGCCTACAATGGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000477008.1
ENST00000635550.1
CDS CCA 72 bp CATACCTTGGGGAGGTGTTTGCTGATAGCCTGGTACTaGGCCATTGTAGGCTCCATAGGGAATGGCGGGGGC +
Preference number: 6 (lower is better)
Translates to: HTLGRCLLIAWY*AIVGSIGNGGG
Trigger: GCCCCCGCCATTCCCTATGGAGCCTACAATGGCCCAGTACCAGGCTATCAGCAAACACCTCCCCAAGGTATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000477008.1
CDS CCA 72 bp ACCCAGGCAGCCTTGGGGAGGTGTTTGCTGATAGCCTaGTACTGGGCCATTGTAGGCTCCATAGGGAATGGC +
Preference number: 6 (lower is better)
Translates to: TQAALGRCLLIA*YWAIVGSIGNG
Trigger: GCCATTCCCTATGGAGCCTACAATGGCCCAGTACCAGGCTATCAGCAAACACCTCCCCAAGGCTGCCTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000635550.1
CDS CCA 72 bp ATGGCTGAGACCCAGGCAGCCTTTGCATCTGAACAGTaGAGCTTGGCCCATTCTGTACATCTCCTTGGCCAA +
Preference number: 6 (lower is better)
Translates to: MAETQAAFASEQ*SLAHSVHLLGQ
Trigger: TTGGCCAAGGAGATGTACAGAATGGGCCAAGCTCCACTGTTCAGATGCAAAGGCTGCCTGGGTCTCAGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
CDS TCA 72 bp GGGCTGGGGCTGCCCAAATGGTGGCACAGGTGGAACTaGCTGGTTGACGTTCATTATGAAAGCATTCCCAAT +
Preference number: 6 (lower is better)
Translates to: GLGLPKWWHRWN*LVDVHYESIPN
Trigger: ATTGGGAATGCTTTCATAATGAACGTCAACCAGTCAGTTCCACCTGTGCCACCATTTGGGCAGCCCCAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000339365.2
ENST00000345254.9
ENST00000465076.5
ENST00000635550.1
CDS CCA 72 bp CCCCGATATGCTGGATGGGAAAGCAAAGATAGTCACTaGTCAGCTGCCCATCATGTGTGCATTCCCACCATC +
Preference number: 6 (lower is better)
Translates to: PRYAGWESKDSH*SAAHHVCIPTI
Trigger: GATGGTGGGAATGCACACATGATGGGCAGCTGACCAGTGACTATCTTTGCTTTCCCATCCAGCATATCGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496827.1
CDS GCA 72 bp AGCAAAGATAGTCACTGGTCAGCTGCCCATCATGTGTaGATTCCCACCATCACAACTACCCACTCACCATCC +
Preference number: 6 (lower is better)
Translates to: SKDSHWSAAHHV*IPTITTTHSPS
Trigger: GGATGGTGAGTGGGTAGTTGTGATGGTGGGAATGCACACATGATGGGCAGCTGACCAGTGACTATCTTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496827.1
CDS CCA 72 bp ACGTCAGCAGTACCTGTAACCTTTGCATCTGAACAGTaGAGCTTGGCCCATTCTGTACATCTCCTTGGCCAA +
Preference number: 6 (lower is better)
Translates to: TSAVPVTFASEQ*SLAHSVHLLGQ
Trigger: TTGGCCAAGGAGATGTACAGAATGGGCCAAGCTCCACTGTTCAGATGCAAAGGTTACAGGTACTGCTGACGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477008.1
CDS GCA 72 bp AAGTATACTTCCACACCCATATTCTCCTTGACTCCCTaGCCTCACCAAACCACTGGTGATCTGACTGAAGGA +
Preference number: 6 (lower is better)
Translates to: KYTSTPIFSLTP*PHQTTGDLTEG
Trigger: TCCTTCAGTCAGATCACCAGTGGTTTGGTGAGGGCAGGGAGTCAAGGAGAATATGGGTGTGGAAGTATACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465076.5
CDS CCA 72 bp ACCCAGGTACTAAGATGGGTCAATAATCCACAGGGCTaGACGTCAGCAGTACCTGTAACCTTTGCATCTGAA +
Preference number: 6 (lower is better)
Translates to: TQVLRWVNNPQG*TSAVPVTFASE
Trigger: TTCAGATGCAAAGGTTACAGGTACTGCTGACGTCCAGCCCTGTGGATTATTGACCCATCTTAGTACCTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477008.1
CDS CAA 90 bp GCTCCCAATTGTTTCACAAAGTATACTTCCACACCCATATTCTCCTaGACTCCCTGCCCTCACCAAACCACTGGTGATCTGACTGAAGGA +
Preference number: 6 (lower is better)
Translates to: APNCFTKYTSTPIFS*TPCPHQTTGDLTEG
Trigger: TCCTTCAGTCAGATCACCAGTGGTTTGGTGAGGGCAGGGAGTCAAGGAGAATATGGGTGTGGAAGTATACTTTGTGAAACAATTGGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465076.5
CDS CAA 90 bp GATGACTGCCCTCCTTTAATGGACTTTCATGCTAAGATGGGTTTATaGGGTCACTGTACCACTGAAGTTTTCACCATTTATGTGGTTTCC +
Preference number: 6 (lower is better)
Translates to: DDCPPLMDFHAKMGL*GHCTTEVFTIYVVS
Trigger: GGAAACCACATAAATGGTGAAAACTTCAGTGGTACAGTGACCCAATAAACCCATCTTAGCATGAAAGTCCATTAAAGGAGGGCAGTCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477008.1
CDS CAA 90 bp CCCAAGTGTTCCCTGATATTTGAGGGTACTAGCACACTAACTATATaGGCTCCCAATTGTTTCACAAAGTATACTTCCACACCCATATTC +
Preference number: 6 (lower is better)
Translates to: PKCSLIFEGTSTLTI*APNCFTKYTSTPIF
Trigger: GAATATGGGTGTGGAAGTATACTTTGTGAAACAATTGGGAGCCAATATAGTTAGTGTGCTAGTACCCTCAAATATCAGGGAACACTTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465076.5
CDS CAA 72 bp TCCCTGATATTTGAGGGTACTAGCACACTAACTATATaGGCTCCCAATTGTTTCACAAAGTATACTTCCACA +
Preference number: 6 (lower is better)
Translates to: SLIFEGTSTLTI*APNCFTKYTST
Trigger: TGTGGAAGTATACTTTGTGAAACAATTGGGAGCCAATATAGTTAGTGTGCTAGTACCCTCAAATATCAGGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465076.5
CDS CAA 72 bp CCTCCTTTAATGGACTTTCATGCTAAGATGGGTTTATaGGGTCACTGTACCACTGAAGTTTTCACCATTTAT +
Preference number: 6 (lower is better)
Translates to: PPLMDFHAKMGL*GHCTTEVFTIY
Trigger: ATAAATGGTGAAAACTTCAGTGGTACAGTGACCCAATAAACCCATCTTAGCATGAAAGTCCATTAAAGGAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000477008.1