RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SEC24A (Homo sapiens)

Ensembl gene IDs: ENSG00000113615

Ensembl transcript IDs: ENST00000322887.8, ENST00000398844.7, ENST00000513123.1

Found 273 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCTTCTTCCCTATCCCAAACAACTCAGTTAAAGTCAGCTCATATTaGTATAAACCTGGAAGTTACTATTCCATTGGTGATCATATAAGA +
Preference number: 1 (lower is better)
Translates to: CFFPIPNNSVKVSSY*YKPGSYYSIGDHIR
Trigger: TCTTATATGATCACCAATGGAATAGTAACTTCCAGGTTTATATCAATATGAGCTGACTTTAACTGAGTTGTTTGGGATAGGGAAGAAGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
3UTR CAA 90 bp CGCACTATGGCACAGTCACCATTGCCAACAGCAGAGACCATAGACTaGCTAGTTAAAATGTTACCCCTACGGCATATATGCATGTACAGG +
Preference number: 2 (lower is better)
Translates to: RTMAQSPLPTAETID*LVKMLPLRHICMYR
Trigger: CCTGTACATGCATATATGCCGTAGGGGTAACATTTTAACTAGCAAGTCTATGGTCTCTGCTGTTGGCAATGGTGACTGTGCCATAGTGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322887.8
3UTR-3UTR GCA 90 bp TTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATAAGTCCAAACCCCTACGGCATATATaGATGTACAGGGTAGACAAC +
Preference number: 2 (lower is better)
Translates to: LGLTVLAHAVVQQDYKSKPLRHI*MYRVDN
Trigger: GTTGTCTACCCTGTACATGCATATATGCCGTAGGGG...TTTGGACTTATAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322887.8
3UTR-3UTR CCA 90 bp TTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATAAGTCCAAAAAATACTTCGCACTATaGCACAGTCACCATTGCCAA +
Preference number: 2 (lower is better)
Translates to: LGLTVLAHAVVQQDYKSKKYFAL*HSHHCQ
Trigger: TTGGCAATGGTGACTGTGCCATAGTGCGAAGTATTT...TTTGGACTTATAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000322887.8
3UTR-3UTR TCA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTGACACGTGTGGGGAATaGATTCTAGTTTTCCTACAT +
Preference number: 2 (lower is better)
Translates to: KLPVQCATYTLQTNLNTADTCGE*ILVFLH
Trigger: ATGTAGGAAAACTAGAATTCATTCCCCACACGTGTC...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398844.7
3UTR-3UTR GCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTAGTGCCACTTACACACTaGAAACCAACCTTAACACTG +
Preference number: 2 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLVPLTH*KPTLTL
Trigger: CAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCAC...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
3UTR-3UTR TCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAATCAGAGTTGCATGTTTaGTTCTCTGCTGTGGTCTTT +
Preference number: 2 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQSELHV*FSAVVF
Trigger: AAAGACCACAGCAGAGAATCAAACATGCAACTCTGA...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
3UTR-3UTR GCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTACATTTCCAGGTATTCTaGACTATCGTGACATTCCTT +
Preference number: 2 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLHFQVF*TIVTFL
Trigger: AAGGAATGTCACGATAGTGCAGAATACCTGGAAATG...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
3UTR-3UTR GCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAAACTTCCAGTTCAATGTaGCACTTACACACTGCAAAC +
Preference number: 2 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQTSSSM*HLHTAN
Trigger: GTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGT...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
3UTR-3UTR TCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTATTTGCTATAGGTTGTTaGAATCACAGTGAGAACATC +
Preference number: 2 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLFAIGC*NHSENI
Trigger: GATGTTCTCACTGTGATTTCAACAACCTATAGCAAA...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
3UTR-3UTR TCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAATTGTTGAAATCACAGTaGGAACATCTCAATCATCAC +
Preference number: 2 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQLLKSQ*EHLNHH
Trigger: GTGATGATTGAGATGTTCTCACTGTGATTTCAACAA...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
3UTR-3UTR CAA 90 bp TCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATAAGGCAGAGACCATAGACTaGCTAGTTAAAATGTTACCC +
Preference number: 3 (lower is better)
Translates to: SKLGLTVLAHAVVQQDYKAETID*LVKMLP
Trigger: GGGTAACATTTTAACTAGCAAGTCTATGGTCTCTGC...CTTATAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322887.8
3UTR GCA 72 bp CAAGAAAACTTCCAGTTCAATGTGCCACTTACACACTaGAAACCAACCTTAACACTGCTTAAGGGAGATATT +
Preference number: 3 (lower is better)
Translates to: QENFQFNVPLTH*KPTLTLLKGDI
Trigger: AATATCTCCCTTAAGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTTTCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
3UTR TCA 72 bp CCTATCCCAAACAACTCAGTTAAAGTCAGCTCATATTaGTATAAACCTGGAAGTTACTATTCCATTGGTGAT +
Preference number: 3 (lower is better)
Translates to: PIPNNSVKVSSY*YKPGSYYSIGD
Trigger: ATCACCAATGGAATAGTAACTTCCAGGTTTATATCAATATGAGCTGACTTTAACTGAGTTGTTTGGGATAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp TTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATAAGTCCAAAGCTCCGTTCTGGGCCTaGAGGCTGGCTGGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: LGLTVLAHAVVQQDYKSKAPFWA*RLAGAP
Trigger: CGGCGCCCCAGCCAGCCTCCAGGCCCAGAACGGAGC...TTTGGACTTATAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp CAAATCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTAGGCCCTCACTGGGGGTaGGCCTCCAGCTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: QIKVGPYSSCTCSSPARLGPHWG*ASSWRG
Trigger: CCCCCTCCAGCTGGAGGCCCACCCCCAGTGAGGGCC...TAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGATTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR TCA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTCTGGGAGCTGAGGCTTaGGAGTCGGGCCGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: KLPVQCATYTLQTNLNTALGAEA*ESGRRG
Trigger: GCCCCGCCGGCCCGACTCTCAAGCCTCAGCTCCCAG...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTGGCCCTCACTGGGGGTaGGCCTCCAGCTGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: KLPVQCATYTLQTNLNTAGPHWG*ASSWRG
Trigger: CCCCCTCCAGCTGGAGGCCCACCCCCAGTGAGGGCC...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp CAAATCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTACGTGAGGGCCCTCACTaGGGGTGGGCCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: QIKVGPYSSCTCSSPARLREGPH*GWASSW
Trigger: CCAGCTGGAGGCCCACCCCCAGTGAGGGCCCTCACG...TAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp CTTCGCACTATGGCACAGTCACCATTGCCAACAGCAGAGACCATAGACTTGCTAGCCGGTATTCCCGGCTaGGACATGATGACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: LRTMAQSPLPTAETIDLLAGIPG*DMMTGL
Trigger: CAACCCAGTCATCATGTCCCAGCCGGGAATACCGGC...TAGCAAGTCTATGGTCTCTGCTGTTGGCAATGGTGACTGTGCCATAGTGCGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR TCA 90 bp TCAGAGAATCTACAGACACTAAACAATGAAGTTGGTCAAATGACAAGAAAGCCACTGGGAGCTGAGGCTTaGGAGTCGGGCCGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: SENLQTLNNEVGQMTRKPLGAEA*ESGRRG
Trigger: GCCCCGCCGGCCCGACTCTCAAGCCTCAGCTCCCAG...TGGCTTTCTTGTCATTTGACCAACTTCATTGTTTAGTGTCTGTAGATTCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp TTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATAAGTCCAAAATTAAGCCCGAGGCATaGCGCCGCACTCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LGLTVLAHAVVQQDYKSKIKPEA*RRTLPR
Trigger: CCTGGGGAGAGTGCGGCGCCATGCCTCGGGCTTAAT...TTTGGACTTATAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTACGTGAGGGCCCTCACTaGGGGTGGGCCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLREGPH*GWASSW
Trigger: CCAGCTGGAGGCCCACCCCCAGTGAGGGCCCTCACG...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp TTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATAAGTCCAAAGGCCACAGCCTAGCCTaGGAGCTGAGGCTTGAGAGT +
Preference number: 4 (lower is better)
Translates to: LGLTVLAHAVVQQDYKSKGHSLA*ELRLES
Trigger: ACTCTCAAGCCTCAGCTCCCAGGCTAGGCTGTGGCC...TTTGGACTTATAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp GAAGGTATTACACATTTCCAGGTATTCTGCACTATCGTGACATTCCTTAAAAATGCTCCGTTCTGGGCCTaGAGGCTGGCTGGGGCGCCG +
Preference number: 4 (lower is better)
Translates to: EGITHFQVFCTIVTFLKNAPFWA*RLAGAP
Trigger: CGGCGCCCCAGCCAGCCTCCAGGCCCAGAACGGAGC...ATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp AATACTTCGCACTATGGCACAGTCACCATTGCCAACAGCAGAGACCATAGACTTTTTGGACAGGACCGTTaGTGTAGGGAGACCCCGAGG +
Preference number: 4 (lower is better)
Translates to: NTSHYGTVTIANSRDHRLFGQDR*CRETPR
Trigger: CCTCGGGGTCTCCCTACACCAACGGTCCTGTCCAAA...AAGTCTATGGTCTCTGCTGTTGGCAATGGTGACTGTGCCATAGTGCGAAGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR TCA 90 bp AATACTTCGCACTATGGCACAGTCACCATTGCCAACAGCAGAGACCATAGACTTGGAGCAGGACCACTATaGAGCGAAGGTGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: NTSHYGTVTIANSRDHRLGAGPL*SEGVTG
Trigger: TCCAGTGACACCTTCGCTTCATAGTGGTCCTGCTCC...AAGTCTATGGTCTCTGCTGTTGGCAATGGTGACTGTGCCATAGTGCGAAGTATT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp TCAGAGAATCTACAGACACTAAACAATGAAGTTGGTCAAATGACAAGAAAGCCAAAGGCGGCTCCGTTCTaGGCCTGGAGGCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SENLQTLNNEVGQMTRKPKAAPF*AWRLAG
Trigger: CCCAGCCAGCCTCCAGGCCCAGAACGGAGCCGCCTT...TGGCTTTCTTGTCATTTGACCAACTTCATTGTTTAGTGTCTGTAGATTCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAAAAGGCGGCTCCGTTCTaGGCCTGGAGGCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQKAAPF*AWRLAG
Trigger: CCCAGCCAGCCTCCAGGCCCAGAACGGAGCCGCCTT...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTAATTAAGCCCGAGGCATaGCGCCGCACTCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLIKPEA*RRTLPR
Trigger: CCTGGGGAGAGTGCGGCGCCATGCCTCGGGCTTAAT...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp CAAATCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTAAATAAGGCCTGCGTCTaGGGAATGCTAGTCAGCGTG +
Preference number: 4 (lower is better)
Translates to: QIKVGPYSSCTCSSPARLNKACV*GMLVSV
Trigger: CACGCTGACTAGCATTCCTCAGACGCAGGCCTTATT...TAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR TCA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTCAGAGCCTGCATCCATaGGGAAAGCTCCATCTCTGC +
Preference number: 4 (lower is better)
Translates to: KLPVQCATYTLQTNLNTAQSLHP*GKLHLC
Trigger: GCAGAGATGGAGCTTTCCTCATGGATGCAGGCTCTG...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR GCA 90 bp AATACTTCGCACTATGGCACAGTCACCATTGCCAACAGCAGAGACCATAGACTTGGGCCTTACAGTTCTTaGACATGCAGTAGTCCAGCA +
Preference number: 4 (lower is better)
Translates to: NTSHYGTVTIANSRDHRLGPYSS*TCSSPA
Trigger: TGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCC...AAGTCTATGGTCTCTGCTGTTGGCAATGGTGACTGTGCCATAGTGCGAAGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp TCAGAGAATCTACAGACACTAAACAATGAAGTTGGTCAAATGACAAGAAAGCCATGGGTTGGAAGGGGCTaGTCGGGGTCGACAACAGCG +
Preference number: 4 (lower is better)
Translates to: SENLQTLNNEVGQMTRKPWVGRG*SGSTTA
Trigger: CGCTGTTGTCGACCCCGACCAGCCCCTTCCAACCCA...TGGCTTTCTTGTCATTTGACCAACTTCATTGTTTAGTGTCTGTAGATTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp CAAATCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTAAAGCGAAGGTGTCACTaGATTAGAGGCCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: QIKVGPYSSCTCSSPARLKRRCH*IRGHRW
Trigger: CCACCTGTGGCCTCTAATCCAGTGACACCTTCGCTT...TAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGATTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp AATACTTCGCACTATGGCACAGTCACCATTGCCAACAGCAGAGACCATAGACTTCCCATGAGGAGCTCCTaGTTGAAAAGTTGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: NTSHYGTVTIANSRDHRLPMRSS*LKSCRQ
Trigger: CTGCCTACAACTTTTCAACCAGGAGCTCCTCATGGG...AAGTCTATGGTCTCTGCTGTTGGCAATGGTGACTGTGCCATAGTGCGAAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTGTTTGGTTCCTCTCGTaGTTTCAGGGCTCCCACTCC +
Preference number: 4 (lower is better)
Translates to: KLPVQCATYTLQTNLNTAVWFLS*FQGSHS
Trigger: GGAGTGGGAGCCCTGAAACCACGAGAGGAACCAAAC...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp TTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATAAGTCCAAAGCACAAGAAGAGAGCTaGAAGACCACTGCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: LGLTVLAHAVVQQDYKSKAQEES*KTTAES
Trigger: GCTTTCAGCAGTGGTCTTTCAGCTCTCTTCTTGTGC...TTTGGACTTATAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR TCA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTAATAAGGCCTGCGTCTaGGGAATGCTAGTCAGCGTG +
Preference number: 4 (lower is better)
Translates to: KLPVQCATYTLQTNLNTANKACV*GMLVSV
Trigger: CACGCTGACTAGCATTCCTCAGACGCAGGCCTTATT...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp GACAAATCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACGATGTACGTCCTGCATaGACGGCATCTCACAATTGT +
Preference number: 4 (lower is better)
Translates to: DKSKLGLTVLAHAVVQQDDVRPA*TASHNC
Trigger: ACAATTGTGAGATGCCGTTCATGCAGGACGTACATC...GTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGATTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR GCA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTGGGTGGTACTCCAGTTaGACCAGGTGGTGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: KLPVQCATYTLQTNLNTAGWYSS*TRWCCV
Trigger: AACACAACACCACCTGGTGCAACTGGAGTACCACCC...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR GCA 90 bp GACAAATCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACCCCCTACGGCATATATaGATGTACAGGGTAGACAAC +
Preference number: 4 (lower is better)
Translates to: DKSKLGLTVLAHAVVQQDPLRHI*MYRVDN
Trigger: GTTGTCTACCCTGTACATGCATATATGCCGTAGGGG...GTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGATTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAAGGCCACAGCCTAGCCTaGGAGCTGAGGCTTGAGAGT +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQGHSLA*ELRLES
Trigger: ACTCTCAAGCCTCAGCTCCCAGGCTAGGCTGTGGCC...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTAAGCGAAGGTGTCACTaGATTAGAGGCCACAGGTGG +
Preference number: 4 (lower is better)
Translates to: KLPVQCATYTLQTNLNTAKRRCH*IRGHRW
Trigger: CCACCTGTGGCCTCTAATCCAGTGACACCTTCGCTT...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp AATACTTCGCACTATGGCACAGTCACCATTGCCAACAGCAGAGACCATAGACTTGCTACTAGAAGGCATTaGTGTAGTAGCTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: NTSHYGTVTIANSRDHRLATRRH*CSSWVL
Trigger: CAGAACCCAGCTACTACACCAATGCCTTCTAGTAGC...AAGTCTATGGTCTCTGCTGTTGGCAATGGTGACTGTGCCATAGTGCGAAGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp TCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATAAGCCAATTCAAAGGTGGTaGCAGGTTGGCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SKLGLTVLAHAVVQQDYKPIQRW*QVGFRK
Trigger: CTTCCTGAAGCCAACCTGCCACCACCTTTGAATTGG...CTTATAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp CAAATCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATTGCCAATTCAAAGGTaGTGGCAGGTTGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: QIKVGPYSSCTCSSPARLLPIQR*WQVGFR
Trigger: CCTGAAGCCAACCTGCCACCACCTTTGAATTGGCAA...TAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp AATACTTCGCACTATGGCACAGTCACCATTGCCAACAGCAGAGACCATAGACTTTCCAGTTGCACCAGGTaGTGTTGTGTTCTGATAACC +
Preference number: 4 (lower is better)
Translates to: NTSHYGTVTIANSRDHRLSSCTR*CCVLIT
Trigger: GGTTATCAGAACACAACACCACCTGGTGCAACTGGA...AAGTCTATGGTCTCTGCTGTTGGCAATGGTGACTGTGCCATAGTGCGAAGTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp TCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATAAGATTCAAGGAAGAGGGTaGTACTCCAGTTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: SKLGLTVLAHAVVQQDYKIQGRG*YSSCTR
Trigger: CCTGGTGCAACTGGAGTACCACCCTCTTCCTTGAAT...CTTATAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR TCA 90 bp TCAGAGAATCTACAGACACTAAACAATGAAGTTGGTCAAATGACAAGAAAGCCACTGAAAGACCACTGCTaGAAGCGGAGGGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SENLQTLNNEVGQMTRKPLKDHC*KRREEA
Trigger: AGCCTCCTCCCTCCGCTTTCAGCAGTGGTCTTTCAG...TGGCTTTCTTGTCATTTGACCAACTTCATTGTTTAGTGTCTGTAGATTCTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR TCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAACTGAAAGACCACTGCTaGAAGCGGAGGGAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQLKDHC*KRREEA
Trigger: AGCCTCCTCCCTCCGCTTTCAGCAGTGGTCTTTCAG...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTAGGAGCAGGACCACTATaGAGCGAAGGTGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLGAGPL*SEGVTG
Trigger: TCCAGTGACACCTTCGCTTCATAGTGGTCCTGCTCC...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp CAAATCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTAAAGTCTTTGAAAGGATaGAGCAGCAGCCCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: QIKVGPYSSCTCSSPARLKSLKG*SSSPKG
Trigger: TCCTTTGGGGCTGCTGCTTCATCCTTTCAAAGACTT...TAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR TCA 90 bp CAAATCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTAAGATACACTGGAGGCTaGGGTGGTCGTAACATGTAT +
Preference number: 4 (lower is better)
Translates to: QIKVGPYSSCTCSSPARLRYTGG*GGRNMY
Trigger: ATACATGTTACGACCACCTCAGCCTCCAGTGTATCT...TAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp AATACTTCGCACTATGGCACAGTCACCATTGCCAACAGCAGAGACCATAGACTTATGAGGGTAGGATCCTaGAAGCTGGAAATTGTATCC +
Preference number: 4 (lower is better)
Translates to: NTSHYGTVTIANSRDHRLMRVGS*KLEIVS
Trigger: GGATACAATTTCCAGCTTCCAGGATCCTACCCTCAT...AAGTCTATGGTCTCTGCTGTTGGCAATGGTGACTGTGCCATAGTGCGAAGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp TCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATAAGAGTCTTTGCTGGTATTaGATGAGGGTAGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: SKLGLTVLAHAVVQQDYKSLCWY*MRVGSW
Trigger: CCAGGATCCTACCCTCATCCAATACCAGCAAAGACT...CTTATAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp CAAATCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTAATTAGAGGCCACAGGTaGTCTATTAAGAGTCTGCCC +
Preference number: 4 (lower is better)
Translates to: QIKVGPYSSCTCSSPARLIRGHR*SIKSLP
Trigger: GGGCAGACTCTTAATAGACCACCTGTGGCCTCTAAT...TAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTAGGACCCAAGGCACTCTaGGTCTCCAGAGTCTTGGTA +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLGPKAL*VSRVLV
Trigger: TACCAAGACTCTGGAGACCCAGAGTGCCTTGGGTCC...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTTGCATACCCAGCGTCTaGGTTGACGTTAGGCAAAGA +
Preference number: 4 (lower is better)
Translates to: KLPVQCATYTLQTNLNTACIPSV*VDVRQR
Trigger: TCTTTGCCTAACGTCAACCCAGACGCTGGGTATGCA...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
3UTR CAA 72 bp GCACAGTCACCATTGCCAACAGCAGAGACCATAGACTaGCTAGTTAAAATGTTACCCCTACGGCATATATGC +
Preference number: 4 (lower is better)
Translates to: AQSPLPTAETID*LVKMLPLRHIC
Trigger: GCATATATGCCGTAGGGGTAACATTTTAACTAGCAAGTCTATGGTCTCTGCTGTTGGCAATGGTGACTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR TCA 90 bp GACAAATCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACACAATGGTTTGTTTGTaGGGCTGTGGATGGATAGTT +
Preference number: 4 (lower is better)
Translates to: DKSKLGLTVLAHAVVQQDTMVCL*GCGWIV
Trigger: AACTATCCATCCACAGCCTCACAAACAAACCATTGT...GTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGATTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR TCA 90 bp AATACTTCGCACTATGGCACAGTCACCATTGCCAACAGCAGAGACCATAGACTTATGCTTGTGGTTAAATaGTTAGCACCTAAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: NTSHYGTVTIANSRDHRLMLVVK*LAPKGV
Trigger: GACTCCCTTAGGTGCTAATCATTTAACCACAAGCAT...AAGTCTATGGTCTCTGCTGTTGGCAATGGTGACTGTGCCATAGTGCGAAGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR TCA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTAGATACACTGGAGGCTaGGGTGGTCGTAACATGTAT +
Preference number: 4 (lower is better)
Translates to: KLPVQCATYTLQTNLNTARYTGG*GGRNMY
Trigger: ATACATGTTACGACCACCTCAGCCTCCAGTGTATCT...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR GCA 90 bp AATACTTCGCACTATGGCACAGTCACCATTGCCAACAGCAGAGACCATAGACTTTACAGTTCTTGCACATaGAGTAGTCCAGCAAGACTA +
Preference number: 4 (lower is better)
Translates to: NTSHYGTVTIANSRDHRLYSSCT*SSPARL
Trigger: TAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTA...AAGTCTATGGTCTCTGCTGTTGGCAATGGTGACTGTGCCATAGTGCGAAGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp GAAGGTATTACACATTTCCAGGTATTCTGCACTATCGTGACATTCCTTAAAAATGCCGGTATTCCCGGCTaGGACATGATGACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: EGITHFQVFCTIVTFLKNAGIPG*DMMTGL
Trigger: CAACCCAGTCATCATGTCCCAGCCGGGAATACCGGC...ATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp GAAGGTATTACACATTTCCAGGTATTCTGCACTATCGTGACATTCCTTAAAAATTTTGGACAGGACCGTTaGTGTAGGGAGACCCCGAGG +
Preference number: 4 (lower is better)
Translates to: EGITHFQVFCTIVTFLKNFGQDR*CRETPR
Trigger: CCTCGGGGTCTCCCTACACCAACGGTCCTGTCCAAA...ATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTAGTCTTTGCTGGTATTaGATGAGGGTAGGATCCTGG +
Preference number: 4 (lower is better)
Translates to: KLPVQCATYTLQTNLNTASLCWY*MRVGSW
Trigger: CCAGGATCCTACCCTCATCCAATACCAGCAAAGACT...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp TCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATAAGCTGAGTAAAGGCTTGTaGCCCACTTGGGTAATTCAA +
Preference number: 4 (lower is better)
Translates to: SKLGLTVLAHAVVQQDYKLSKGL*PTWVIQ
Trigger: TTGAATTACCCAAGTGGGCCACAAGCCTTTACTCAG...CTTATAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp GACAAATCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACAGCATTTTGAACTTCTaGTCTTCTGTGAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: DKSKLGLTVLAHAVVQQDSILNF*SSVRFS
Trigger: GGAGAACCTCACAGAAGACCAGAAGTTCAAAATGCT...GTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGATTTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp GACAAATCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACAAATACTTCGCACTATaGCACAGTCACCATTGCCAA +
Preference number: 4 (lower is better)
Translates to: DKSKLGLTVLAHAVVQQDKYFAL*HSHHCQ
Trigger: TTGGCAATGGTGACTGTGCCATAGTGCGAAGTATTT...GTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGATTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR TCA 90 bp TTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATAAGTCCAAAACTCTGGGTTACAGTTaGGTTTCTGGATGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LGLTVLAHAVVQQDYKSKTLGYS*VSGCLH
Trigger: ATGAAGACATCCAGAAACTCAACTGTAACCCAGAGT...TTTGGACTTATAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR GCA 90 bp GACAAATCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTGGATTCAAAGTCTTTaGTGGTATTGGATGAGGGTA +
Preference number: 4 (lower is better)
Translates to: DKSKLGLTVLAHAVVQQDWIQSL*WYWMRV
Trigger: TACCCTCATCCAATACCAGCAAAGACTTTGAATCCA...GTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGATTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR GCA 90 bp TACTTTATTCTTGTAAGTTCCAAAGCGAGTTTAGCTCTTCCCTGTTGCAAATCTGGGTGGTACTCCAGTTaGACCAGGTGGTGTTGTGTT +
Preference number: 4 (lower is better)
Translates to: YFILVSSKASLALPCCKSGWYSS*TRWCCV
Trigger: AACACAACACCACCTGGTGCAACTGGAGTACCACCC...AGATTTGCAACAGGGAAGAGCTAAACTCGCTTTGGAACTTACAAGAATAAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp AATACTTCGCACTATGGCACAGTCACCATTGCCAACAGCAGAGACCATAGACTTTGGAAATTGTATCCTTaGCTCACTGACTCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: NTSHYGTVTIANSRDHRLWKLYP*LTDSCE
Trigger: TTCACAAGAGTCAGTGAGCCAAGGATACAATTTCCA...AAGTCTATGGTCTCTGCTGTTGGCAATGGTGACTGTGCCATAGTGCGAAGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTATTGCCAATTCAAAGGTaGTGGCAGGTTGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLLPIQR*WQVGFR
Trigger: CCTGAAGCCAACCTGCCACCACCTTTGAATTGGCAA...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTACCCATGAGGAGCTCCTaGTTGAAAAGTTGTAGGCAG +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLPMRSS*LKSCRQ
Trigger: CTGCCTACAACTTTTCAACCAGGAGCTCCTCATGGG...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp TCAGAGAATCTACAGACACTAAACAATGAAGTTGGTCAAATGACAAGAAAGCCAGGCTTGTGGCCCACTTaGGTAATTCAAGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: SENLQTLNNEVGQMTRKPGLWPT*VIQGRG
Trigger: CCCTCTTCCTTGAATTACCCAAGTGGGCCACAAGCC...TGGCTTTCTTGTCATTTGACCAACTTCATTGTTTAGTGTCTGTAGATTCTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAAGGCTTGTGGCCCACTTaGGTAATTCAAGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQGLWPT*VIQGRG
Trigger: CCCTCTTCCTTGAATTACCCAAGTGGGCCACAAGCC...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTCTGAGTAAAGGCTTGTaGCCCACTTGGGTAATTCAA +
Preference number: 4 (lower is better)
Translates to: KLPVQCATYTLQTNLNTALSKGL*PTWVIQ
Trigger: TTGAATTACCCAAGTGGGCCACAAGCCTTTACTCAG...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp TTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATAAGTCCAAAGTCTTCATGCAAATTTaGAACTGGAGGCTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: LGLTVLAHAVVQQDYKSKVFMQI*NWRLQR
Trigger: CCTTTGAAGCCTCCAGTTCCAAATTTGCATGAAGAC...TTTGGACTTATAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp GACAAATCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACGTTCTCCATAAACTCTaGTCAAAGGGTTGTACAAGA +
Preference number: 4 (lower is better)
Translates to: DKSKLGLTVLAHAVVQQDVLHKL*SKGCTR
Trigger: TCTTGTACAACCCTTTGACCAGAGTTTATGGAGAAC...GTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGATTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTACTGAAAGCTGAAGAATaGGGGGCTGAGGTATGGTTC +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLLKAEE*GAEVWF
Trigger: GAACCATACCTCAGCCCCCCATTCTTCAGCTTTCAG...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTAGTAGTAGCTGGGTTCTaGGAAGCAGGTAATGGCATT +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLVVAGF*EAGNGI
Trigger: AATGCCATTACCTGCTTCTCAGAACCCAGCTACTAC...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp TTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATAAGTCCAAATTTCTTGAAGAAGATTaGCAACTCTTAGACCCTCTG +
Preference number: 4 (lower is better)
Translates to: LGLTVLAHAVVQQDYKSKFLEED*QLLDPL
Trigger: CAGAGGGTCTAAGAGTTGTCAATCTTCTTCAAGAAA...TTTGGACTTATAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR TCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTAAAGTCTTTGAAAGGATaGAGCAGCAGCCCCAAAGGA +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLKSLKG*SSSPKG
Trigger: TCCTTTGGGGCTGCTGCTTCATCCTTTCAAAGACTT...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTAGATGTACGTCCTGCATaGACGGCATCTCACAATTGT +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLDVRPA*TASHNC
Trigger: ACAATTGTGAGATGCCGTTCATGCAGGACGTACATC...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp GACAAATCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACACAGACACTAAACAATaGAGTTGGTCAAATGACAAG +
Preference number: 4 (lower is better)
Translates to: DKSKLGLTVLAHAVVQQDTDTKQ*SWSNDK
Trigger: CTTGTCATTTGACCAACTTCATTGTTTAGTGTCTGT...GTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGATTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR TCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTAAAGAAAAAGGAACCATaGGTCCAGGCTGCTGGTTAC +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLKKKEP*VQAAGY
Trigger: GTAACCAGCAGCCTGGACTCATGGTTCCTTTTTCTT...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR GCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAACCGAATCCTCATGACTaGCTCAAAGCCAATCTTCCG +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQPNPHD*LKANLP
Trigger: CGGAAGATTGGCTTTGAGGCAGTCATGAGGATTCGG...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR GCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTAGGAAAGCTCCATCTCTaGTCAGCTTCTCCACTGAAA +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLGKLHL*SASPLK
Trigger: TTTCAGTGGAGAAGCTGAGCAGAGATGGAGCTTTCC...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR GCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAACATCAGTACAGAGCCTaGATCCATGAGGAAAGCTCC +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQHQYRA*IHEESS
Trigger: GGAGCTTTCCTCATGGATGCAGGCTCTGTACTGATG...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR GCA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTACTTCCAGTTCAATGTaGCACTTACACACTGCAAAC +
Preference number: 4 (lower is better)
Translates to: KLPVQCATYTLQTNLNTATSSSM*HLHTAN
Trigger: GTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGT...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAACCAATTCAAAGGTGGTaGCAGGTTGGCTTCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQPIQRW*QVGFRK
Trigger: CTTCCTGAAGCCAACCTGCCACCACCTTTGAATTGG...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTATCCAGTTGCACCAGGTaGTGTTGTGTTCTGATAACC +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLSSCTR*CCVLIT
Trigger: GGTTATCAGAACACAACACCACCTGGTGCAACTGGA...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAAATTCAAGGAAGAGGGTaGTACTCCAGTTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQIQGRG*YSSCTR
Trigger: CCTGGTGCAACTGGAGTACCACCCTCTTCCTTGAAT...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp TTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATAAGTCCAAAAAGACAAATCAAAGTTaGGCCTTACAGTTCTTGCAC +
Preference number: 4 (lower is better)
Translates to: LGLTVLAHAVVQQDYKSKKTNQS*ALQFLH
Trigger: GTGCAAGAACTGTAAGGCCCAACTTTGATTTGTCTT...TTTGGACTTATAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR TCA 90 bp TACTTTATTCTTGTAAGTTCCAAAGCGAGTTTAGCTCTTCCCTGTTGCAAATCTGTAGTAGCTGGGTTCTaGGAAGCAGGTAATGGCATT +
Preference number: 4 (lower is better)
Translates to: YFILVSSKASLALPCCKSVVAGF*EAGNGI
Trigger: AATGCCATTACCTGCTTCTCAGAACCCAGCTACTAC...AGATTTGCAACAGGGAAGAGCTAAACTCGCTTTGGAACTTACAAGAATAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR TCA 90 bp TACTTTATTCTTGTAAGTTCCAAAGCGAGTTTAGCTCTTCCCTGTTGCAAATCTTACAGTTGGTTGGGATaGTGCACGAGGACAATGGTT +
Preference number: 4 (lower is better)
Translates to: YFILVSSKASLALPCCKSYSWLG*CTRTMV
Trigger: AACCATTGTCCTCGTGCATCATCCCAACCAACTGTA...AGATTTGCAACAGGGAAGAGCTAAACTCGCTTTGGAACTTACAAGAATAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR TCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAATACAGTTGGTTGGGATaGTGCACGAGGACAATGGTT +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQYSWLG*CTRTMV
Trigger: AACCATTGTCCTCGTGCATCATCCCAACCAACTGTA...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp CAAATCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTACTTCAGGAACATCATTaGCTCGATAACATAAGTTAC +
Preference number: 4 (lower is better)
Translates to: QIKVGPYSSCTCSSPARLLQEHH*LDNISY
Trigger: GTAACTTATGTTATCGAGTCAATGATGTTCCTGAAG...TAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR TCA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTCAAACTCTGGCAAACTaGATTCAAGTATCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: KLPVQCATYTLQTNLNTAQTLAN*IQVSSF
Trigger: GAAACTGGATACTTGAATTCAGTTTGCCAGAGTTTG...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp GAAGGTATTACACATTTCCAGGTATTCTGCACTATCGTGACATTCCTTAAAAATTCAACAGCAACTTGCTaGCCAGAACAGTCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: EGITHFQVFCTIVTFLKNSTATC*PEQSKA
Trigger: AGCCTTGGACTGTTCTGGTCAGCAAGTTGCTGTTGA...ATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTAGAGTGCTCCCTCATCTaGGAGATTGTCAACTCTATA +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLECSLI*EIVNSI
Trigger: TATAGAGTTGACAATCTCTCAGATGAGGGAGCACTC...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR GCA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTTTCTTCTTTCGCCTTTaGTGGATGTATACAAGAGTG +
Preference number: 4 (lower is better)
Translates to: KLPVQCATYTLQTNLNTAFFFRL*WMYTRV
Trigger: CACTCTTGTATACATCCAGCAAAGGCGAAAGAAGAA...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR GCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTAACCATGAGTCCAGGCTaGTGGTTACTTAAGACTGAA +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLTMSPG*WLLKTE
Trigger: TTCAGTCTTAAGTAACCAGCAGCCTGGACTCATGGT...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR GCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTAGGGAAAAATGGTCTCTaGTCTCTAAGCCAAGAGATG +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLGKNGL*SLSQEM
Trigger: CATCTCTTGGCTTAGAGAGCAGAGACCATTTTTCCC...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAAATTAGAGGCCACAGGTaGTCTATTAAGAGTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQIRGHR*SIKSLP
Trigger: GGGCAGACTCTTAATAGACCACCTGTGGCCTCTAAT...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAAGCTACTAGAAGGCATTaGTGTAGTAGCTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQATRRH*CSSWVL
Trigger: CAGAACCCAGCTACTACACCAATGCCTTCTAGTAGC...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTTTGTTTGTGAGGCTGTaGATGGATAGTTATATTGCC +
Preference number: 4 (lower is better)
Translates to: KLPVQCATYTLQTNLNTALFVRL*MDSYIA
Trigger: GGCAATATAACTATCCATCCACAGCCTCACAAACAA...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp TCAGAGAATCTACAGACACTAAACAATGAAGTTGGTCAAATGACAAGAAAGCCAGATGCACGAGGACAATaGTTTGTTTGTGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: SENLQTLNNEVGQMTRKPDARGQ*FVCEAV
Trigger: CACAGCCTCACAAACAAACCATTGTCCTCGTGCATC...TGGCTTTCTTGTCATTTGACCAACTTCATTGTTTAGTGTCTGTAGATTCTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAAGATGCACGAGGACAATaGTTTGTTTGTGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQDARGQ*FVCEAV
Trigger: CACAGCCTCACAAACAAACCATTGTCCTCGTGCATC...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp TACTTTATTCTTGTAAGTTCCAAAGCGAGTTTAGCTCTTCCCTGTTGCAAATCTCCAGATACAGTTGGTTaGGATGATGCACGAGGACAA +
Preference number: 4 (lower is better)
Translates to: YFILVSSKASLALPCCKSPDTVG*DDARGQ
Trigger: TTGTCCTCGTGCATCATCCCAACCAACTGTATCTGG...AGATTTGCAACAGGGAAGAGCTAAACTCGCTTTGGAACTTACAAGAATAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAACCAGATACAGTTGGTTaGGATGATGCACGAGGACAA +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQPDTVG*DDARGQ
Trigger: TTGTCCTCGTGCATCATCCCAACCAACTGTATCTGG...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAACATTCGACCACCAGTTaGAGACATCAGCTTAAAGGC +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQHSTTS*RHQLKG
Trigger: GCCTTTAAGCTGATGTCTCCAACTGGTGGTCGAATG...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTATCCCACTCCAAGAGTTaGGAGTTGTGTTTGAAAGAC +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLSHSKS*ELCLKD
Trigger: GTCTTTCAAACACAACTCCCAACTCTTGGAGTGGGA...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAATTAGCAGATGACCTGTaGTTTGGTTCCTCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQLADDL*FGSSRG
Trigger: ACCACGAGAGGAACCAAACCACAGGTCATCTGCTAA...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTAACAATGGTTTGTTTGTaGGGCTGTGGATGGATAGTT +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLTMVCL*GCGWIV
Trigger: AACTATCCATCCACAGCCTCACAAACAAACCATTGT...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp TACTTTATTCTTGTAAGTTCCAAAGCGAGTTTAGCTCTTCCCTGTTGCAAATCTAGGCTTCAAAGGTGTTaGCGGAAGCATGTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: YFILVSSKASLALPCCKSRLQRC*RKHVSF
Trigger: GAAAGAAACATGCTTCCGTCAACACCTTTGAAGCCT...AGATTTGCAACAGGGAAGAGCTAAACTCGCTTTGGAACTTACAAGAATAAAGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR TCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAAAGGCTTCAAAGGTGTTaGCGGAAGCATGTTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQRLQRC*RKHVSF
Trigger: GAAAGAAACATGCTTCCGTCAACACCTTTGAAGCCT...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTACACTTCCATCTCCTTTaGTCAAGAAAGCTGACGAAA +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLHFHLL*SRKLTK
Trigger: TTTCGTCAGCTTTCTTGATCAAAGGAGATGGAAGTG...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAAGTTGGGAGTTGTGTTTaGAAGACAGACATTCGACCA +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQVGSCV*KTDIRP
Trigger: TGGTCGAATGTCTGTCTTTCAAACACAACTCCCAAC...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTAATAGACACTACCTGCTaGATACCGAGAAATACAACC +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLIDTTC*IPRNTT
Trigger: GGTTGTATTTCTCGGTATTCAGCAGGTAGTGTCTAT...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp GAAGGTATTACACATTTCCAGGTATTCTGCACTATCGTGACATTCCTTAAAAATAAGACTCTCTTCCACTaGCATCTGTACTGCATACCC +
Preference number: 4 (lower is better)
Translates to: EGITHFQVFCTIVTFLKNKTLFH*HLYCIP
Trigger: GGGTATGCAGTACAGATGTCAGTGGAAGAGAGTCTT...ATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAATGTCCCAGTCTGGAATaGTTTCTGTTTAAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQCPSLE*FLFKES
Trigger: GCTCTCCTTAAACAGAAATCATTCCAGACTGGGACA...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTAGGCTGGTTTTTCACTTaGCACATAGCAAAAATGCGT +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLGWFFT*HIAKMR
Trigger: ACGCATTTTTGCTATGTGTCAAGTGAAAAACCAGCC...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTTTTGCTATAGGTTGTTaGAATCACAGTGAGAACATC +
Preference number: 4 (lower is better)
Translates to: KLPVQCATYTLQTNLNTAFAIGC*NHSENI
Trigger: GATGTTCTCACTGTGATTTCAACAACCTATAGCAAA...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTATCAGAGTTGCATGTTTaGTTCTCTGCTGTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLSELHV*FSAVVF
Trigger: AAAGACCACAGCAGAGAATCAAACATGCAACTCTGA...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR GCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAAGTGCCACTTACACACTaGAAACCAACCTTAACACTG +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQVPLTH*KPTLTL
Trigger: CAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCAC...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR GCA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTATGGTAGAACTGCCATaGTCAGATTTAAATACCAAG +
Preference number: 4 (lower is better)
Translates to: KLPVQCATYTLQTNLNTAMVELP*SDLNTK
Trigger: CTTGGTATTTAAATCTGAGCATGGCAGTTCTACCAT...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAAATGAGGGTAGGATCCTaGAAGCTGGAAATTGTATCC +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQMRVGS*KLEIVS
Trigger: GGATACAATTTCCAGCTTCCAGGATCCTACCCTCAT...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp TTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATAAGTCCAAAGAATTAAATAAGGGCTaGGGTACATCTCTATATGAT +
Preference number: 4 (lower is better)
Translates to: LGLTVLAHAVVQQDYKSKELNKG*GTSLYD
Trigger: ATCATATAGAGATGTACCCCAGCCCTTATTTAATTC...TTTGGACTTATAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTATAGAAGTCAGTGGATaGTGTCATGTGTATATCCTT +
Preference number: 4 (lower is better)
Translates to: KLPVQCATYTLQTNLNTAIEVSG*CHVYIL
Trigger: AAGGATATACACATGACACCATCCACTGACTTCTAT...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTAATGAGTCCAGGCTGCTaGTTACTTAAGACTGAAGAA +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLMSPGC*LLKTEE
Trigger: TTCTTCAGTCTTAAGTAACCAGCAGCCTGGACTCAT...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAAATGCTTGTGGTTAAATaGTTAGCACCTAAGGGAGTC +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQMLVVK*LAPKGV
Trigger: GACTCCCTTAGGTGCTAATCATTTAACCACAAGCAT...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAAACTCTGGGTTACAGTTaGGTTTCTGGATGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQTLGYS*VSGCLH
Trigger: ATGAAGACATCCAGAAACTCAACTGTAACCCAGAGT...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp TCAGAGAATCTACAGACACTAAACAATGAAGTTGGTCAAATGACAAGAAAGCCACACTTCCATCTCCTTTaGTCAAGAAAGCTGACGAAA +
Preference number: 4 (lower is better)
Translates to: SENLQTLNNEVGQMTRKPHFHLL*SRKLTK
Trigger: TTTCGTCAGCTTTCTTGATCAAAGGAGATGGAAGTG...TGGCTTTCTTGTCATTTGACCAACTTCATTGTTTAGTGTCTGTAGATTCTCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR TCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTAGGCAAACACAAAGTATaGACACGAATTCTTCTTTCG +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLGKHKV*TRILLS
Trigger: CGAAAGAAGAATTCGTGTTCATACTTTGTGTTTGCC...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAAAACCCTGAAATTGCTTaGACATCAGCTCCAAGAAAG +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQNPEIA*TSAPRK
Trigger: CTTTCTTGGAGCTGATGTTCAAGCAATTTCAGGGTT...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp GAAGGTATTACACATTTCCAGGTATTCTGCACTATCGTGACATTCCTTAAAAATCTGAAAGGGAGTCAATaGCTGCATTCACTAGAGCAT +
Preference number: 4 (lower is better)
Translates to: EGITHFQVFCTIVTFLKNLKGSQ*LHSLEH
Trigger: ATGCTCTAGTGAATGCAGTCATTGACTCCCTTTCAG...ATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAACATAGGCTGTGGAATTaGTGCATAGTTTTGAACTCC +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQHRLWN*CIVLNS
Trigger: GGAGTTCAAAACTATGCATCAATTCCACAGCCTATG...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR GCA 90 bp TCAGAGAATCTACAGACACTAAACAATGAAGTTGGTCAAATGACAAGAAAGCCATTCTGGATGTCTTCATaGAAATTTGGAACTGGAGGC +
Preference number: 4 (lower is better)
Translates to: SENLQTLNNEVGQMTRKPFWMSS*KFGTGG
Trigger: GCCTCCAGTTCCAAATTTGCATGAAGACATCCAGAA...TGGCTTTCTTGTCATTTGACCAACTTCATTGTTTAGTGTCTGTAGATTCTCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR GCA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTGTTTTCAGTAAATCTTaGACGAGCTCTTTACTTTCA +
Preference number: 4 (lower is better)
Translates to: KLPVQCATYTLQTNLNTAVFSKS*TSSLLS
Trigger: TGAAAGTAAAGAGCTCGTGCAAGATTTACTGAAAAC...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTAGTTCTCCATAAACTCTaGTCAAAGGGTTGTACAAGA +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLVLHKL*SKGCTR
Trigger: TCTTGTACAACCCTTTGACCAGAGTTTATGGAGAAC...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAAAGCATTTTGAACTTCTaGTCTTCTGTGAGGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQSILNF*SSVRFS
Trigger: GGAGAACCTCACAGAAGACCAGAAGTTCAAAATGCT...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTTCTTATAGAAGTCAGTaGATGGTGTCATGTGTATAT +
Preference number: 4 (lower is better)
Translates to: KLPVQCATYTLQTNLNTASYRSQ*MVSCVY
Trigger: ATATACACATGACACCATCCACTGACTTCTATAAGA...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTACAGAGTCGAAACTACTaGCAAACACAAAGTATGAAC +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLQSRNY*QTQSMN
Trigger: GTTCATACTTTGTGTTTGCCAGTAGTTTCGACTCTG...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTATGTCAACAGCCATATTaGCCAATAACCCTGAAATTG +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLCQQPY*PITLKL
Trigger: CAATTTCAGGGTTATTGGCCAATATGGCTGTTGACA...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTATATTCTGGCAGATTCTaGTGTATCAAGTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLYSGRF*CIKFWK
Trigger: CTTCCAGAACTTGATACACCAGAATCTGCCAGAATA...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp TCAGAGAATCTACAGACACTAAACAATGAAGTTGGTCAAATGACAAGAAAGCCAAGGTACAGAAGGACCTaGCTTTATGAAGCTATTTTG +
Preference number: 4 (lower is better)
Translates to: SENLQTLNNEVGQMTRKPRYRRT*LYEAIL
Trigger: CAAAATAGCTTCATAAAGTCAGGTCCTTCTGTACCT...TGGCTTTCTTGTCATTTGACCAACTTCATTGTTTAGTGTCTGTAGATTCTCTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR TCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAAAGGTACAGAAGGACCTaGCTTTATGAAGCTATTTTG +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQRYRRT*LYEAIL
Trigger: CAAAATAGCTTCATAAAGTCAGGTCCTTCTGTACCT...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp TACTTTATTCTTGTAAGTTCCAAAGCGAGTTTAGCTCTTCCCTGTTGCAAATCTCAAACTCTGGCAAACTaGATTCAAGTATCCAGTTTC +
Preference number: 4 (lower is better)
Translates to: YFILVSSKASLALPCCKSQTLAN*IQVSSF
Trigger: GAAACTGGATACTTGAATTCAGTTTGCCAGAGTTTG...AGATTTGCAACAGGGAAGAGCTAAACTCGCTTTGGAACTTACAAGAATAAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR TCA 90 bp GAAGGTATTACACATTTCCAGGTATTCTGCACTATCGTGACATTCCTTAAAAATCAGAATACTGTCCACTaGGAAGGAATAAGTCAACAG +
Preference number: 4 (lower is better)
Translates to: EGITHFQVFCTIVTFLKNQNTVH*EGISQQ
Trigger: CTGTTGACTTATTCCTTCTCAGTGGACAGTATTCTG...ATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp GAAGGTATTACACATTTCCAGGTATTCTGCACTATCGTGACATTCCTTAAAAATGACACGTGTGGGGAATaGATTCTAGTTTTCCTACAT +
Preference number: 4 (lower is better)
Translates to: EGITHFQVFCTIVTFLKNDTCGE*ILVFLH
Trigger: ATGTAGGAAAACTAGAATTCATTCCCCACACGTGTC...ATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR GCA 90 bp TCAGAGAATCTACAGACACTAAACAATGAAGTTGGTCAAATGACAAGAAAGCCAGTAACCACAGGCAATTaGACTAAGTCTTTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: SENLQTLNNEVGQMTRKPVTTGN*TKSLKG
Trigger: TCCTTTCAAAGACTTAGTGCAATTGCCTGTGGTTAC...TGGCTTTCTTGTCATTTGACCAACTTCATTGTTTAGTGTCTGTAGATTCTCTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR GCA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTAACAGTATTTCAGAGTTaGATGTTTGATTCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLTVFQS*MFDSLL
Trigger: CAGCAGAGAATCAAACATGCAACTCTGAAATACTGT...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAATGGAAATTGTATCCTTaGCTCACTGACTCTTGTGAA +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQWKLYP*LTDSCE
Trigger: TTCACAAGAGTCAGTGAGCCAAGGATACAATTTCCA...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp TACTTTATTCTTGTAAGTTCCAAAGCGAGTTTAGCTCTTCCCTGTTGCAAATCTTTGTTTGTGAGGCTGTaGATGGATAGTTATATTGCC +
Preference number: 4 (lower is better)
Translates to: YFILVSSKASLALPCCKSLFVRL*MDSYIA
Trigger: GGCAATATAACTATCCATCCACAGCCTCACAAACAA...AGATTTGCAACAGGGAAGAGCTAAACTCGCTTTGGAACTTACAAGAATAAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CCA 90 bp GAAGGTATTACACATTTCCAGGTATTCTGCACTATCGTGACATTCCTTAAAAATGTCTTCATGCAAATTTaGAACTGGAGGCTTCAAAGG +
Preference number: 4 (lower is better)
Translates to: EGITHFQVFCTIVTFLKNVFMQI*NWRLQR
Trigger: CCTTTGAAGCCTCCAGTTCCAAATTTGCATGAAGAC...ATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAAAAGTATTGGGAAAAATaGTCTCTGCTCTCTAAGCCA +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQKYWEK*SLLSKP
Trigger: TGGCTTAGAGAGCAGAGACCATTTTTCCCAATACTT...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp GAAGGTATTACACATTTCCAGGTATTCTGCACTATCGTGACATTCCTTAAAAATTTTCTTGAAGAAGATTaGCAACTCTTAGACCCTCTG +
Preference number: 4 (lower is better)
Translates to: EGITHFQVFCTIVTFLKNFLEED*QLLDPL
Trigger: CAGAGGGTCTAAGAGTTGTCAATCTTCTTCAAGAAA...ATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp GAAGGTATTACACATTTCCAGGTATTCTGCACTATCGTGACATTCCTTAAAAATATGGTACTGCTTGAGTaGCTATTAGTATGTCAGACT +
Preference number: 4 (lower is better)
Translates to: EGITHFQVFCTIVTFLKNMVLLE*LLVCQT
Trigger: AGTCTGACATACTAATAGTCACTCAAGCAGTACCAT...ATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR GCA 90 bp GAAGGTATTACACATTTCCAGGTATTCTGCACTATCGTGACATTCCTTAAAAATTGGATTCAAAGTCTTTaGTGGTATTGGATGAGGGTA +
Preference number: 4 (lower is better)
Translates to: EGITHFQVFCTIVTFLKNWIQSL*WYWMRV
Trigger: TACCCTCATCCAATACCAGCAAAGACTTTGAATCCA...ATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR GCA 90 bp GAAGGTATTACACATTTCCAGGTATTCTGCACTATCGTGACATTCCTTAAAAATGTAACCACAGGCAATTaGACTAAGTCTTTGAAAGGA +
Preference number: 4 (lower is better)
Translates to: EGITHFQVFCTIVTFLKNVTTGN*TKSLKG
Trigger: TCCTTTCAAAGACTTAGTGCAATTGCCTGTGGTTAC...ATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR TCA 90 bp GAAGGTATTACACATTTCCAGGTATTCTGCACTATCGTGACATTCCTTAAAAATCTTCAGGAACATCATTaGCTCGATAACATAAGTTAC +
Preference number: 4 (lower is better)
Translates to: EGITHFQVFCTIVTFLKNLQEHH*LDNISY
Trigger: GTAACTTATGTTATCGAGTCAATGATGTTCCTGAAG...ATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CCA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAAGAATTAAATAAGGGCTaGGGTACATCTCTATATGAT +
Preference number: 4 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQELNKG*GTSLYD
Trigger: ATCATATAGAGATGTACCCCAGCCCTTATTTAATTC...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS TCA 90 bp TCCCCAGGCCACCGGCGGCCACAGCCTAGCCTGGGAGCTGAGGCTTaGGAGTCGGGCCGGCGGGGCCGCGAACGCCCGGCTAGAAGGCGG +
Preference number: 5 (lower is better)
Translates to: SPGHRRPQPSLGAEA*ESGRRGRERPARRR
Trigger: CCGCCTTCTAGCCGGGCGTTCGCGGCCCCGCCGGCCCGACTCTCAAGCCTCAGCTCCCAGGCTAGGCTGTGGCCGCCGGTGGCCTGGGGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS CCA 90 bp GGCCGGTATTCCCGGCTGGGACATGATGACTGGGTTGGAAGGGGCTaGTCGGGGTCGACAACAGCGCACAAGAAGAGAGCTGAAAGACCA +
Preference number: 5 (lower is better)
Translates to: GRYSRLGHDDWVGRG*SGSTTAHKKRAERP
Trigger: TGGTCTTTCAGCTCTCTTCTTGTGCGCTGTTGTCGACCCCGACCAGCCCCTTCCAACCCAGTCATCATGTCCCAGCCGGGAATACCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS CCA 90 bp CTGAGTAAAGGCTTGTGGCCCACTTGGGTAATTCAAGGAAGAGGGTaGTACTCCAGTTGCACCAGGTGGTGTTGTGTTCTGATAACCAGG +
Preference number: 5 (lower is better)
Translates to: LSKGLWPTWVIQGRG*YSSCTRWCCVLITR
Trigger: CCTGGTTATCAGAACACAACACCACCTGGTGCAACTGGAGTACCACCCTCTTCCTTGAATTACCCAAGTGGGCCACAAGCCTTTACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS TCA 90 bp GCTGGTTACTTAAGACTGAAGAACGGTAAGCTGAAAGGGAGTCAATaGCTGCATTCACTAGAGCATCCCGAGCGTCACTCAGACTGGCAG +
Preference number: 5 (lower is better)
Translates to: AGYLRLKNGKLKGSQ*LHSLEHPERHSDWQ
Trigger: CTGCCAGTCTGAGTGACGCTCGGGATGCTCTAGTGAATGCAGTCATTGACTCCCTTTCAGCTTACCGTTCTTCAGTCTTAAGTAACCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS CCA 90 bp AGGACCACTATGAAGCGAAGGTGTCACTGGATTAGAGGCCACAGGTaGTCTATTAAGAGTCTGCCCAGATCCCTGAGAACCACCATAGTT +
Preference number: 5 (lower is better)
Translates to: RTTMKRRCHWIRGHR*SIKSLPRSLRTTIV
Trigger: AACTATGGTGGTTCTCAGGGATCTGGGCAGACTCTTAATAGACCACCTGTGGCCTCTAATCCAGTGACACCTTCGCTTCATAGTGGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS-3UTR CAA 90 bp CTTCGCACTATGGCACAGTCACCATTGCCAACAGCAGAGACCATAGACTTGCTAATGGCACAGTCACCATaGCCAACAGCAGAGACCATA +
Preference number: 5 (lower is better)
Translates to: LRTMAQSPLPTAETIDLLMAQSP*PTAETI
Trigger: TATGGTCTCTGCTGTTGGCAATGGTGACTGTGCCAT...TAGCAAGTCTATGGTCTCTGCTGTTGGCAATGGTGACTGTGCCATAGTGCGAAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS TCA 90 bp AGCAGCCCCAAAGGAAGTTTGGCTTTATTCAATAAGGCCTGCGTCTaGGGAATGCTAGTCAGCGTGCATCGAAATAACTCTGGGTTACAG +
Preference number: 5 (lower is better)
Translates to: SSPKGSLALFNKACV*GMLVSVHRNNSGLQ
Trigger: CTGTAACCCAGAGTTATTTCGATGCACGCTGACTAGCATTCCTCAGACGCAGGCCTTATTGAATAAAGCCAAACTTCCTTTGGGGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS-3UTR CAA 90 bp CTTCGCACTATGGCACAGTCACCATTGCCAACAGCAGAGACCATAGACTTGCTACTGGATTCAAAGTCTTaGCTGGTATTGGATGAGGGT +
Preference number: 5 (lower is better)
Translates to: LRTMAQSPLPTAETIDLLLDSKS*LVLDEG
Trigger: ACCCTCATCCAATACCAGCAAAGACTTTGAATCCAG...TAGCAAGTCTATGGTCTCTGCTGTTGGCAATGGTGACTGTGCCATAGTGCGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CAA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTAGGGTGGTACTCCAGTaGCACCAGGTGGTGTTGTGT +
Preference number: 5 (lower is better)
Translates to: KLPVQCATYTLQTNLNTARVVLQ*HQVVLC
Trigger: ACACAACACCACCTGGTGCAACTGGAGTACCACCCT...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS CCA 90 bp TTGGTTGGGATGATGCACGAGGACAATGGTTTGTTTGTGAGGCTGTaGATGGATAGTTATATTGCCAATTCAAAGGTGGTGGCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: LVGMMHEDNGLFVRL*MDSYIANSKVVAGW
Trigger: CCAACCTGCCACCACCTTTGAATTGGCAATATAACTATCCATCCACAGCCTCACAAACAAACCATTGTCCTCGTGCATCATCCCAACCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS-3UTR CAA 90 bp TCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATAAGAAAGGTGGTGGCAGGTaGGCTTCAGGAAGAAAGCTA +
Preference number: 5 (lower is better)
Translates to: SKLGLTVLAHAVVQQDYKKGGGR*ASGRKL
Trigger: TAGCTTTCTTCCTGAAGCCAACCTGCCACCACCTTT...CTTATAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CAA 90 bp CAAATCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTACACGAGGACAATGGTTaGTTTGTGAGGCTGTGGATG +
Preference number: 5 (lower is better)
Translates to: QIKVGPYSSCTCSSPARLHEDNG*FVRLWM
Trigger: CATCCACAGCCTCACAAACAAACCATTGTCCTCGTG...TAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CAA 90 bp CAAATCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTAATGAGGAGCTCCTGGTaGAAAAGTTGTAGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: QIKVGPYSSCTCSSPARLMRSSW*KSCRQR
Trigger: CCTCTGCCTACAACTTTTCAACCAGGAGCTCCTCAT...TAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CAA 90 bp CTTCGCACTATGGCACAGTCACCATTGCCAACAGCAGAGACCATAGACTTGCTAGGAAGCAAATCCAGATaGTCTAACAAACTCTGGCAA +
Preference number: 5 (lower is better)
Translates to: LRTMAQSPLPTAETIDLLGSKSR*SNKLWQ
Trigger: TTGCCAGAGTTTGTTAGACAATCTGGATTTGCTTCC...TAGCAAGTCTATGGTCTCTGCTGTTGGCAATGGTGACTGTGCCATAGTGCGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS TCA 90 bp CCTTTGATCAAGAAAGCTGACGAAAGGATTGATGTACGTCCTGCATaGACGGCATCTCACAATTGTACTGGAGGTAACCACAGGCAATTG +
Preference number: 5 (lower is better)
Translates to: PLIKKADERIDVRPA*TASHNCTGGNHRQL
Trigger: CAATTGCCTGTGGTTACCTCCAGTACAATTGTGAGATGCCGTTCATGCAGGACGTACATCAATCCTTTCGTCAGCTTTCTTGATCAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS CCA 90 bp ACCACCATAGTTAGACTGTCCAGAGACTGGATTCAAAGTCTTTGCTaGTATTGGATGAGGGTAGGATCCTGGAAGCTGGAAATTGTATCC +
Preference number: 5 (lower is better)
Translates to: TTIVRLSRDWIQSLC*YWMRVGSWKLEIVS
Trigger: GGATACAATTTCCAGCTTCCAGGATCCTACCCTCATCCAATACCAGCAAAGACTTTGAATCCAGTCTCTGGACAGTCTAACTATGGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS CCA 90 bp TTTGATGTAATACCTTCTTGGTTGACAGCTGAATTAAATAAGGGCTaGGGTACATCTCTATATGATGATGTCAGGGGCGTGAGGGCCCTC +
Preference number: 5 (lower is better)
Translates to: FDVIPSWLTAELNKG*GTSLYDDVRGVRAL
Trigger: GAGGGCCCTCACGCCCCTGACATCATCATATAGAGATGTACCCCAGCCCTTATTTAATTCAGCTGTCAACCAAGAAGGTATTACATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS-3UTR CAA 90 bp TCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATAAGAGACAGCAATGCATTTaGGACAGGACCGTTGGTGTA +
Preference number: 5 (lower is better)
Translates to: SKLGLTVLAHAVVQQDYKRQQCI*DRTVGV
Trigger: TACACCAACGGTCCTGTCCAAAATGCATTGCTGTCT...CTTATAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CAA 90 bp CAAATCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTAAAGTCTTTGCTGGTATaGGATGAGGGTAGGATCCTG +
Preference number: 5 (lower is better)
Translates to: QIKVGPYSSCTCSSPARLKSLLV*DEGRIL
Trigger: CAGGATCCTACCCTCATCCAATACCAGCAAAGACTT...TAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CAA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTATGAGGAGCTCCTGGTaGAAAAGTTGTAGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: KLPVQCATYTLQTNLNTAMRSSW*KSCRQR
Trigger: CCTCTGCCTACAACTTTTCAACCAGGAGCTCCTCAT...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTTTGCACCAGGTGGTGTaGTGTTCTGATAACCAGGTG +
Preference number: 5 (lower is better)
Translates to: KLPVQCATYTLQTNLNTALHQVV*CSDNQV
Trigger: CACCTGGTTATCAGAACACAACACCACCTGGTGCAA...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS CCA 90 bp ATAGTTAGACTGTCCAGAGACTGGATTCAAAGTCTTTGCTGGTATTaGATGAGGGTAGGATCCTGGAAGCTGGAAATTGTATCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: IVRLSRDWIQSLCWY*MRVGSWKLEIVSLA
Trigger: AGCCAAGGATACAATTTCCAGCTTCCAGGATCCTACCCTCATCCAATACCAGCAAAGACTTTGAATCCAGTCTCTGGACAGTCTAACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS-3UTR CAA 90 bp GACAAATCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACACACTTCGGCTCATTTaGGGATTCTTGTTAGTAAGC +
Preference number: 5 (lower is better)
Translates to: DKSKLGLTVLAHAVVQQDTLRLI*GFLLVS
Trigger: GCTTACTAACAAGAATCCCAAAATGAGCCGAAGTGT...GTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGATTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CAA 90 bp TCAGAGAATCTACAGACACTAAACAATGAAGTTGGTCAAATGACAAGAAAGCCAAGGGTGGTACTCCAGTaGCACCAGGTGGTGTTGTGT +
Preference number: 5 (lower is better)
Translates to: SENLQTLNNEVGQMTRKPRVVLQ*HQVVLC
Trigger: ACACAACACCACCTGGTGCAACTGGAGTACCACCCT...TGGCTTTCTTGTCATTTGACCAACTTCATTGTTTAGTGTCTGTAGATTCTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CAA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTAGTCTGAGTAAAGGCTaGTGGCCCACTTGGGTAATT +
Preference number: 5 (lower is better)
Translates to: KLPVQCATYTLQTNLNTASLSKG*WPTWVI
Trigger: AATTACCCAAGTGGGCCACAAGCCTTTACTCAGACT...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp TCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATAAGAGCCCCAAAGGAAGTTaGGCTTTATTCAATAAGGCC +
Preference number: 5 (lower is better)
Translates to: SKLGLTVLAHAVVQQDYKSPKGS*ALFNKA
Trigger: GGCCTTATTGAATAAAGCCAAACTTCCTTTGGGGCT...CTTATAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CAA 90 bp TCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATAAGAAGCTGACGAAAGGATaGATGTACGTCCTGCATGAA +
Preference number: 5 (lower is better)
Translates to: SKLGLTVLAHAVVQQDYKKLTKG*MYVLHE
Trigger: TTCATGCAGGACGTACATCAATCCTTTCGTCAGCTT...CTTATAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CAA 90 bp AATACTTCGCACTATGGCACAGTCACCATTGCCAACAGCAGAGACCATAGACTTGCAGAGACCATAGACTaGCTAGTTAAAATGTTACCC +
Preference number: 5 (lower is better)
Translates to: NTSHYGTVTIANSRDHRLAETID*LVKMLP
Trigger: GGGTAACATTTTAACTAGCAAGTCTATGGTCTCTGC...AAGTCTATGGTCTCTGCTGTTGGCAATGGTGACTGTGCCATAGTGCGAAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CAA 90 bp AATACTTCGCACTATGGCACAGTCACCATTGCCAACAGCAGAGACCATAGACTTCAAGACAAATCAAAGTaGGGCCTTACAGTTCTTGCA +
Preference number: 5 (lower is better)
Translates to: NTSHYGTVTIANSRDHRLQDKSK*GLTVLA
Trigger: TGCAAGAACTGTAAGGCCCAACTTTGATTTGTCTTG...AAGTCTATGGTCTCTGCTGTTGGCAATGGTGACTGTGCCATAGTGCGAAGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CAA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTATACCCAGCGTCTGGGTaGACGTTAGGCAAAGACAGT +
Preference number: 5 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLYPASG*TLGKDS
Trigger: ACTGTCTTTGCCTAACGTCAACCCAGACGCTGGGTA...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS GCA 90 bp CATCGAAATAACTCTGGGTTACAGTTGAGTTTCTGGATGTCTTCATaGAAATTTGGAACTGGAGGCTTCAAAGGTGTTGACGGAAGCATG +
Preference number: 5 (lower is better)
Translates to: HRNNSGLQLSFWMSS*KFGTGGFKGVDGSM
Trigger: CATGCTTCCGTCAACACCTTTGAAGCCTCCAGTTCCAAATTTGCATGAAGACATCCAGAAACTCAACTGTAACCCAGAGTTATTTCGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS CCA 90 bp CTAGTCAGCGTGCATCGAAATAACTCTGGGTTACAGTTGAGTTTCTaGATGTCTTCATGCAAATTTGGAACTGGAGGCTTCAAAGGTGTT +
Preference number: 5 (lower is better)
Translates to: LVSVHRNNSGLQLSF*MSSCKFGTGGFKGV
Trigger: AACACCTTTGAAGCCTCCAGTTCCAAATTTGCATGAAGACATCCAGAAACTCAACTGTAACCCAGAGTTATTTCGATGCACGCTGACTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS-3UTR CAA 90 bp CAAATCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTAGGATGGATAGTTATATaGCCAATTCAAAGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: QIKVGPYSSCTCSSPARLGWIVI*PIQRWW
Trigger: CCACCACCTTTGAATTGGCAATATAACTATCCATCC...TAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CAA 90 bp TTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATAAGTCCAAATGTCTTCATGCAAATTaGGAACTGGAGGCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: LGLTVLAHAVVQQDYKSKCLHAN*ELEASK
Trigger: CTTTGAAGCCTCCAGTTCCAAATTTGCATGAAGACA...TTTGGACTTATAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CAA 90 bp TCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATAAGACACTTCCATCTCCTTaGATCAAGAAAGCTGACGAA +
Preference number: 5 (lower is better)
Translates to: SKLGLTVLAHAVVQQDYKTLPSP*IKKADE
Trigger: TTCGTCAGCTTTCTTGATCAAAGGAGATGGAAGTGT...CTTATAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CAA 90 bp TTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATAAGTCCAAAACTCTGGTCAAAGGGTaGTACAAGAATTCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: LGLTVLAHAVVQQDYKSKTLVKG*YKNSSG
Trigger: TCCTGAAGAATTCTTGTACAACCCTTTGACCAGAGT...TTTGGACTTATAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CAA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTACAGATGACCTGTGGTTaGGTTCCTCTCGTGGTTTCA +
Preference number: 5 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLQMTCG*VPLVVS
Trigger: TGAAACCACGAGAGGAACCAAACCACAGGTCATCTG...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS TCA 90 bp GCTTCAAAGGTGTTGACGGAAGCATGTTTCTTTCTTGAAGAAGATTaGCAACTCTTAGACCCTCTGGTTGTAGACTTAATCCACTCATGC +
Preference number: 5 (lower is better)
Translates to: ASKVLTEACFFLEED*QLLDPLVVDLIHSC
Trigger: GCATGAGTGGATTAAGTCTACAACCAGAGGGTCTAAGAGTTGTCAATCTTCTTCAAGAAAGAAACATGCTTCCGTCAACACCTTTGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS TCA 90 bp GGAACTGGAGGCTTCAAAGGTGTTGACGGAAGCATGTTTCTTTCTTaGAGAAGATTGACAACTCTTAGACCCTCTGGTTGTAGACTTAAT +
Preference number: 5 (lower is better)
Translates to: GTGGFKGVDGSMFLS*RRLTTLRPSGCRLN
Trigger: ATTAAGTCTACAACCAGAGGGTCTAAGAGTTGTCAATCTTCTTCAAGAAAGAAACATGCTTCCGTCAACACCTTTGAAGCCTCCAGTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS-3UTR CAA 90 bp TACTTTATTCTTGTAAGTTCCAAAGCGAGTTTAGCTCTTCCCTGTTGCAAATCTCCTGGAAGCTGGAAATaGTATCCTTGGCTCACTGAC +
Preference number: 5 (lower is better)
Translates to: YFILVSSKASLALPCCKSPGSWK*YPWLTD
Trigger: GTCAGTGAGCCAAGGATACAATTTCCAGCTTCCAGG...AGATTTGCAACAGGGAAGAGCTAAACTCGCTTTGGAACTTACAAGAATAAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CAA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAACCTGGAAGCTGGAAATaGTATCCTTGGCTCACTGAC +
Preference number: 5 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQPGSWK*YPWLTD
Trigger: GTCAGTGAGCCAAGGATACAATTTCCAGCTTCCAGG...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAAAAAGGTGGTGGCAGGTaGGCTTCAGGAAGAAAGCTA +
Preference number: 5 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQKGGGR*ASGRKL
Trigger: TAGCTTTCTTCCTGAAGCCAACCTGCCACCACCTTT...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp TCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATAAGCTCATTTTGGGATTCTaGTTAGTAAGCTGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: SKLGLTVLAHAVVQQDYKLILGF*LVSCGV
Trigger: AACACCACAGCTTACTAACAAGAATCCCAAAATGAG...CTTATAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CAA 90 bp TCAGAGAATCTACAGACACTAAACAATGAAGTTGGTCAAATGACAAGAAAGCCATTGCACCAGGTGGTGTaGTGTTCTGATAACCAGGTG +
Preference number: 5 (lower is better)
Translates to: SENLQTLNNEVGQMTRKPLHQVV*CSDNQV
Trigger: CACCTGGTTATCAGAACACAACACCACCTGGTGCAA...TGGCTTTCTTGTCATTTGACCAACTTCATTGTTTAGTGTCTGTAGATTCTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CAA 90 bp TTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTATAAGTCCAAACTCAATAGTAGCATTTaGAACTTCTGGTCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: LGLTVLAHAVVQQDYKSKLNSSI*NFWSSV
Trigger: CACAGAAGACCAGAAGTTCAAAATGCTACTATTGAG...TTTGGACTTATAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CAA 90 bp CAAATCAAAGTTGGGCCTTACAGTTCTTGCACATGCAGTAGTCCAGCAAGACTAATTTTTGTTCTAGTGTaGCCAGGAAGCAAATCCAGA +
Preference number: 5 (lower is better)
Translates to: QIKVGPYSSCTCSSPARLIFVLV*PGSKSR
Trigger: TCTGGATTTGCTTCCTGGCAACACTAGAACAAAAAT...TAGTCTTGCTGGACTACTGCATGTGCAAGAACTGTAAGGCCCAACTTTGATTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CAA 90 bp GAAGGTATTACACATTTCCAGGTATTCTGCACTATCGTGACATTCCTTAAAAATCACGAGGACAATGGTTaGTTTGTGAGGCTGTGGATG +
Preference number: 5 (lower is better)
Translates to: EGITHFQVFCTIVTFLKNHEDNG*FVRLWM
Trigger: CATCCACAGCCTCACAAACAAACCATTGTCCTCGTG...ATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp TACTTTATTCTTGTAAGTTCCAAAGCGAGTTTAGCTCTTCCCTGTTGCAAATCTAGTCTGAGTAAAGGCTaGTGGCCCACTTGGGTAATT +
Preference number: 5 (lower is better)
Translates to: YFILVSSKASLALPCCKSSLSKG*WPTWVI
Trigger: AATTACCCAAGTGGGCCACAAGCCTTTACTCAGACT...AGATTTGCAACAGGGAAGAGCTAAACTCGCTTTGGAACTTACAAGAATAAAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CAA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTAAGCCCCAAAGGAAGTTaGGCTTTATTCAATAAGGCC +
Preference number: 5 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLSPKGS*ALFNKA
Trigger: GGCCTTATTGAATAAAGCCAAACTTCCTTTGGGGCT...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTAAAGCTGACGAAAGGATaGATGTACGTCCTGCATGAA +
Preference number: 5 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLKLTKG*MYVLHE
Trigger: TTCATGCAGGACGTACATCAATCCTTTCGTCAGCTT...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTCTCAATAGTAGCATTTaGAACTTCTGGTCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: KLPVQCATYTLQTNLNTALNSSI*NFWSSV
Trigger: CACAGAAGACCAGAAGTTCAAAATGCTACTATTGAG...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTATTTTTGTTCTAGTGTaGCCAGGAAGCAAATCCAGA +
Preference number: 5 (lower is better)
Translates to: KLPVQCATYTLQTNLNTAIFVLV*PGSKSR
Trigger: TCTGGATTTGCTTCCTGGCAACACTAGAACAAAAAT...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTAAGTTGGGAGTTGTGTTaGAAAGACAGACATTCGACC +
Preference number: 5 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLSWELC*KDRHST
Trigger: GGTCGAATGTCTGTCTTTCAAACACAACTCCCAACT...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp AAACTTCCAGTTCAATGTGCCACTTACACACTGCAAACCAACCTTAACACTGCTGGAAGTTTGCTTTCATaGGACTCTCATCCCTTATTA +
Preference number: 5 (lower is better)
Translates to: KLPVQCATYTLQTNLNTAGSLLS*DSHPLL
Trigger: TAATAAGGGATGAGAGTCCAATGAAAGCAAACTTCC...AGCAGTGTTAAGGTTGGTTTGCAGTGTGTAAGTGGCACATTGAACTGGAAGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp GAAGGTATTACACATTTCCAGGTATTCTGCACTATCGTGACATTCCTTAAAAATAGACAGCAATGCATTTaGGACAGGACCGTTGGTGTA +
Preference number: 5 (lower is better)
Translates to: EGITHFQVFCTIVTFLKNRQQCI*DRTVGV
Trigger: TACACCAACGGTCCTGTCCAAAATGCATTGCTGTCT...ATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTATGTCTTCATGCAAATTaGGAACTGGAGGCTTCAAAG +
Preference number: 5 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLCLHAN*ELEASK
Trigger: CTTTGAAGCCTCCAGTTCCAAATTTGCATGAAGACA...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTAGGAAGCAAATCCAGATaGTCTAACAAACTCTGGCAA +
Preference number: 5 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLGSKSR*SNKLWQ
Trigger: TTGCCAGAGTTTGTTAGACAATCTGGATTTGCTTCC...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTACCAATAACCCTGAAATaGCTTGAACATCAGCTCCAA +
Preference number: 5 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLPITLK*LEHQLQ
Trigger: TTGGAGCTGATGTTCAAGCAATTTCAGGGTTATTGG...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAAGGGCTGGTTTTTCACTaGACACATAGCAAAAATGCG +
Preference number: 5 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQGLVFH*THSKNA
Trigger: CGCATTTTTGCTATGTGTCAAGTGAAAAACCAGCCC...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp GAAGGTATTACACATTTCCAGGTATTCTGCACTATCGTGACATTCCTTAAAAATCTGGATTCAAAGTCTTaGCTGGTATTGGATGAGGGT +
Preference number: 5 (lower is better)
Translates to: EGITHFQVFCTIVTFLKNLDSKS*LVLDEG
Trigger: ACCCTCATCCAATACCAGCAAAGACTTTGAATCCAG...ATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAAGGATGGATAGTTATATaGCCAATTCAAAGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQGWIVI*PIQRWW
Trigger: CCACCACCTTTGAATTGGCAATATAACTATCCATCC...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTACTCATTTTGGGATTCTaGTTAGTAAGCTGTGGTGTT +
Preference number: 5 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLLILGF*LVSCGV
Trigger: AACACCACAGCTTACTAACAAGAATCCCAAAATGAG...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAAACACTTCGGCTCATTTaGGGATTCTTGTTAGTAAGC +
Preference number: 5 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQTLRLI*GFLLVS
Trigger: GCTTACTAACAAGAATCCCAAAATGAGCCGAAGTGT...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp TCAGAGAATCTACAGACACTAAACAATGAAGTTGGTCAAATGACAAGAAAGCCAAACTCTGGGTTACAGTaGAGTTTCTGGATGTCTTCA +
Preference number: 5 (lower is better)
Translates to: SENLQTLNNEVGQMTRKPNSGLQ*SFWMSS
Trigger: TGAAGACATCCAGAAACTCAACTGTAACCCAGAGTT...TGGCTTTCTTGTCATTTGACCAACTTCATTGTTTAGTGTCTGTAGATTCTCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CAA 90 bp CTTGTCTCCAACTTTTCAGAGAAGCAAGATTTAACACAGCACATTGAAGATCAAACACTTCCATCTCCTTaGATCAAGAAAGCTGACGAA +
Preference number: 5 (lower is better)
Translates to: LVSNFSEKQDLTQHIEDQTLPSP*IKKADE
Trigger: TTCGTCAGCTTTCTTGATCAAAGGAGATGGAAGTGT...TTGATCTTCAATGTGCTGTGTTAAATCTTGCTTCTCTGAAAAGTTGGAGACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTAATTCTTCTTTCGCCTTaGCTGGATGTATACAAGAGT +
Preference number: 5 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLILLSP*LDVYKS
Trigger: ACTCTTGTATACATCCAGCAAAGGCGAAAGAAGAAT...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp GAAGGTATTACACATTTCCAGGTATTCTGCACTATCGTGACATTCCTTAAAAATAACTCTGGGTTACAGTaGAGTTTCTGGATGTCTTCA +
Preference number: 5 (lower is better)
Translates to: EGITHFQVFCTIVTFLKNNSGLQ*SFWMSS
Trigger: TGAAGACATCCAGAAACTCAACTGTAACCCAGAGTT...ATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp GAAGGTATTACACATTTCCAGGTATTCTGCACTATCGTGACATTCCTTAAAAATACTCTGGTCAAAGGGTaGTACAAGAATTCTTCAGGA +
Preference number: 5 (lower is better)
Translates to: EGITHFQVFCTIVTFLKNTLVKG*YKNSSG
Trigger: TCCTGAAGAATTCTTGTACAACCCTTTGACCAGAGT...ATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp TACTTTATTCTTGTAAGTTCCAAAGCGAGTTTAGCTCTTCCCTGTTGCAAATCTACAATAGACAAGACATaGAGTCATGATGATGGTCAG +
Preference number: 5 (lower is better)
Translates to: YFILVSSKASLALPCCKSTIDKT*SHDDGQ
Trigger: CTGACCATCATCATGACTCAATGTCTTGTCTATTGT...AGATTTGCAACAGGGAAGAGCTAAACTCGCTTTGGAACTTACAAGAATAAAGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322887.8
CDS-3UTR CAA 90 bp GAAGGTATTACACATTTCCAGGTATTCTGCACTATCGTGACATTCCTTAAAAATTCCAAGAGTTGGGAGTaGTGTTTGAAAGACAGACAT +
Preference number: 5 (lower is better)
Translates to: EGITHFQVFCTIVTFLKNSKSWE*CLKDRH
Trigger: ATGTCTGTCTTTCAAACACAACTCCCAACTCTTGGA...ATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp GAAGGTATTACACATTTCCAGGTATTCTGCACTATCGTGACATTCCTTAAAAATCTGTCAACAGCCATATaGGCCAATAACCCTGAAATT +
Preference number: 5 (lower is better)
Translates to: EGITHFQVFCTIVTFLKNLSTAI*ANNPEI
Trigger: AATTTCAGGGTTATTGGCCAATATGGCTGTTGACAG...ATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp GAAGGTATTACACATTTCCAGGTATTCTGCACTATCGTGACATTCCTTAAAAATCCCTCATCTGAGAGATaGTCAACTCTATACAAACTG +
Preference number: 5 (lower is better)
Translates to: EGITHFQVFCTIVTFLKNPSSER*STLYKL
Trigger: CAGTTTGTATAGAGTTGACAATCTCTCAGATGAGGG...ATTTTTAAGGAATGTCACGATAGTGCAGAATACCTGGAAATGTGTAATACCTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS-3UTR CAA 90 bp TATGGTAGAACTGCCATGCTCAGATTTAAATACCAAGATTGCCCTTGTCTGTTAAAAGGAAGACAAATCTaGTCTCCAACTTTTCAGAGA +
Preference number: 5 (lower is better)
Translates to: YGRTAMLRFKYQDCPCLLKGRQI*SPTFQR
Trigger: TCTCTGAAAAGTTGGAGACAAGATTTGTCTTCCTTT...TAACAGACAAGGGCAATCTTGGTATTTAAATCTGAGCATGGCAGTTCTACCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS TCA 72 bp CACCGGCGGCCACAGCCTAGCCTGGGAGCTGAGGCTTaGGAGTCGGGCCGGCGGGGCCGCGAACGCCCGGCT +
Preference number: 6 (lower is better)
Translates to: HRRPQPSLGAEA*ESGRRGRERPA
Trigger: AGCCGGGCGTTCGCGGCCCCGCCGGCCCGACTCTCAAGCCTCAGCTCCCAGGCTAGGCTGTGGCCGCCGGTG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS CCA 72 bp CCGAGGCCAAGGCGGCTCCGTTCTGGGCCTGGAGGCTaGCTGGGGCGCCGCCGGAGGCCGGTATTCCCGGCT +
Preference number: 6 (lower is better)
Translates to: PRPRRLRSGPGG*LGRRRRPVFPA
Trigger: AGCCGGGAATACCGGCCTCCGGCGGCGCCCCAGCCAGCCTCCAGGCCCAGAACGGAGCCGCCTTGGCCTCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS CCA 72 bp TCCCGGCTGGGACATGATGACTGGGTTGGAAGGGGCTaGTCGGGGTCGACAACAGCGCACAAGAAGAGAGCT +
Preference number: 6 (lower is better)
Translates to: SRLGHDDWVGRG*SGSTTAHKKRA
Trigger: AGCTCTCTTCTTGTGCGCTGTTGTCGACCCCGACCAGCCCCTTCCAACCCAGTCATCATGTCCCAGCCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS TCA 72 bp GAAGCAGGTAATGGCATTCGGGGAGCAGGACCACTATaGAGCGAAGGTGTCACTGGATTAGAGGCCACAGGT +
Preference number: 6 (lower is better)
Translates to: EAGNGIRGAGPL*SEGVTGLEATG
Trigger: ACCTGTGGCCTCTAATCCAGTGACACCTTCGCTTCATAGTGGTCCTGCTCCCCGAATGCCATTACCTGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS CCA 72 bp GGCTTGTGGCCCACTTGGGTAATTCAAGGAAGAGGGTaGTACTCCAGTTGCACCAGGTGGTGTTGTGTTCTG +
Preference number: 6 (lower is better)
Translates to: GLWPTWVIQGRG*YSSCTRWCCVL
Trigger: CAGAACACAACACCACCTGGTGCAACTGGAGTACCACCCTCTTCCTTGAATTACCCAAGTGGGCCACAAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS CCA 72 bp TCGGGGAGCAGGACCACTATGAAGCGAAGGTGTCACTaGATTAGAGGCCACAGGTGGTCTATTAAGAGTCTG +
Preference number: 6 (lower is better)
Translates to: SGSRTTMKRRCH*IRGHRWSIKSL
Trigger: CAGACTCTTAATAGACCACCTGTGGCCTCTAATCCAGTGACACCTTCGCTTCATAGTGGTCCTGCTCCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS CAA 90 bp CTTGTGGCCCACTTGGGTAATTCAAGGAAGAGGGTGGTACTCCAGTaGCACCAGGTGGTGTTGTGTTCTGATAACCAGGTGGTAAGGAGG +
Preference number: 6 (lower is better)
Translates to: LVAHLGNSRKRVVLQ*HQVVLCSDNQVVRR
Trigger: CCTCCTTACCACCTGGTTATCAGAACACAACACCACCTGGTGCAACTGGAGTACCACCCTCTTCCTTGAATTACCCAAGTGGGCCACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS TCA 72 bp AAGCTACTAGAAGGCATTGGTGTAGTAGCTGGGTTCTaGGAAGCAGGTAATGGCATTCGGGGAGCAGGACCA +
Preference number: 6 (lower is better)
Translates to: KLLEGIGVVAGF*EAGNGIRGAGP
Trigger: TGGTCCTGCTCCCCGAATGCCATTACCTGCTTCTCAGAACCCAGCTACTACACCAATGCCTTCTAGTAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS CAA 72 bp AGGAAGAGGGTGGTACTCCAGTTGCACCAGGTGGTGTaGTGTTCTGATAACCAGGTGGTAAGGAGGGATATG +
Preference number: 6 (lower is better)
Translates to: RKRVVLQLHQVV*CSDNQVVRRDM
Trigger: CATATCCCTCCTTACCACCTGGTTATCAGAACACAACACCACCTGGTGCAACTGGAGTACCACCCTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS GCA 72 bp ACTTGGGTAATTCAAGGAAGAGGGTGGTACTCCAGTTaGACCAGGTGGTGTTGTGTTCTGATAACCAGGTGG +
Preference number: 6 (lower is better)
Translates to: TWVIQGRGWYSS*TRWCCVLITRW
Trigger: CCACCTGGTTATCAGAACACAACACCACCTGGTGCAACTGGAGTACCACCCTCTTCCTTGAATTACCCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS CCA 72 bp GATGGTGTCATGTGTATATCCTTAGCAGATGACCTGTaGTTTGGTTCCTCTCGTGGTTTCAGGGCTCCCACT +
Preference number: 6 (lower is better)
Translates to: DGVMCISLADDL*FGSSRGFRAPT
Trigger: AGTGGGAGCCCTGAAACCACGAGAGGAACCAAACCACAGGTCATCTGCTAAGGATATACACATGACACCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS CAA 72 bp CACTTGGGTAATTCAAGGAAGAGGGTGGTACTCCAGTaGCACCAGGTGGTGTTGTGTTCTGATAACCAGGTG +
Preference number: 6 (lower is better)
Translates to: HLGNSRKRVVLQ*HQVVLCSDNQV
Trigger: CACCTGGTTATCAGAACACAACACCACCTGGTGCAACTGGAGTACCACCCTCTTCCTTGAATTACCCAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS CAA 72 bp TCCACTGACATCTGTACTGCATACCCAGCGTCTGGGTaGACGTTAGGCAAAGACAGTAAGTCGGTTGACCTA +
Preference number: 6 (lower is better)
Translates to: STDICTAYPASG*TLGKDSKSVDL
Trigger: TAGGTCAACCGACTTACTGTCTTTGCCTAACGTCAACCCAGACGCTGGGTATGCAGTACAGATGTCAGTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS CAA 90 bp AGACTCTCTTCCACTGACATCTGTACTGCATACCCAGCGTCTGGGTaGACGTTAGGCAAAGACAGTAAGTCGGTTGACCTAACAAAGAAG +
Preference number: 6 (lower is better)
Translates to: RLSSTDICTAYPASG*TLGKDSKSVDLTKK
Trigger: CTTCTTTGTTAGGTCAACCGACTTACTGTCTTTGCCTAACGTCAACCCAGACGCTGGGTATGCAGTACAGATGTCAGTGGAAGAGAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS CAA 90 bp GGTAATTCAAGGAAGAGGGTGGTACTCCAGTTGCACCAGGTGGTGTaGTGTTCTGATAACCAGGTGGTAAGGAGGGATATGAATATCCAA +
Preference number: 6 (lower is better)
Translates to: GNSRKRVVLQLHQVV*CSDNQVVRRDMNIQ
Trigger: TTGGATATTCATATCCCTCCTTACCACCTGGTTATCAGAACACAACACCACCTGGTGCAACTGGAGTACCACCCTCTTCCTTGAATTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS TCA 72 bp TTAAGACTGAAGAACGGTAAGCTGAAAGGGAGTCAATaGCTGCATTCACTAGAGCATCCCGAGCGTCACTCA +
Preference number: 6 (lower is better)
Translates to: LRLKNGKLKGSQ*LHSLEHPERHS
Trigger: TGAGTGACGCTCGGGATGCTCTAGTGAATGCAGTCATTGACTCCCTTTCAGCTTACCGTTCTTCAGTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS CAA 90 bp CCAGGTGGTAAGGAGGGATATGAATATCCAACACTTCGGCTCATTTaGGGATTCTTGTTAGTAAGCTGTGGTGTTGCCAATAAGCCACCT +
Preference number: 6 (lower is better)
Translates to: PGGKEGYEYPTLRLI*GFLLVSCGVANKPP
Trigger: AGGTGGCTTATTGGCAACACCACAGCTTACTAACAAGAATCCCAAAATGAGCCGAAGTGTTGGATATTCATATCCCTCCTTACCACCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS TCA 72 bp AAGAAAGCTGACGAAAGGATTGATGTACGTCCTGCATaGACGGCATCTCACAATTGTACTGGAGGTAACCAC +
Preference number: 6 (lower is better)
Translates to: KKADERIDVRPA*TASHNCTGGNH
Trigger: GTGGTTACCTCCAGTACAATTGTGAGATGCCGTTCATGCAGGACGTACATCAATCCTTTCGTCAGCTTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS CCA 72 bp CTGTCCAGAGACTGGATTCAAAGTCTTTGCTGGTATTaGATGAGGGTAGGATCCTGGAAGCTGGAAATTGTA +
Preference number: 6 (lower is better)
Translates to: LSRDWIQSLCWY*MRVGSWKLEIV
Trigger: TACAATTTCCAGCTTCCAGGATCCTACCCTCATCCAATACCAGCAAAGACTTTGAATCCAGTCTCTGGACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS CCA 72 bp GGCTGTGGATGGATAGTTATATTGCCAATTCAAAGGTaGTGGCAGGTTGGCTTCAGGAAGAAAGCTACTAGA +
Preference number: 6 (lower is better)
Translates to: GCGWIVILPIQR*WQVGFRKKATR
Trigger: TCTAGTAGCTTTCTTCCTGAAGCCAACCTGCCACCACCTTTGAATTGGCAATATAACTATCCATCCACAGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS CAA 72 bp ACTGTCCAGAGACTGGATTCAAAGTCTTTGCTGGTATaGGATGAGGGTAGGATCCTGGAAGCTGGAAATTGT +
Preference number: 6 (lower is better)
Translates to: TVQRLDSKSLLV*DEGRILEAGNC
Trigger: ACAATTTCCAGCTTCCAGGATCCTACCCTCATCCAATACCAGCAAAGACTTTGAATCCAGTCTCTGGACAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS CCA 72 bp TGTGGATGGATAGTTATATTGCCAATTCAAAGGTGGTaGCAGGTTGGCTTCAGGAAGAAAGCTACTAGAAGG +
Preference number: 6 (lower is better)
Translates to: CGWIVILPIQRW*QVGFRKKATRR
Trigger: CCTTCTAGTAGCTTTCTTCCTGAAGCCAACCTGCCACCACCTTTGAATTGGCAATATAACTATCCATCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS CCA 72 bp ATACCTTCTTGGTTGACAGCTGAATTAAATAAGGGCTaGGGTACATCTCTATATGATGATGTCAGGGGCGTG +
Preference number: 6 (lower is better)
Translates to: IPSWLTAELNKG*GTSLYDDVRGV
Trigger: CACGCCCCTGACATCATCATATAGAGATGTACCCCAGCCCTTATTTAATTCAGCTGTCAACCAAGAAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS CAA 72 bp ATACAGTTGGTTGGGATGATGCACGAGGACAATGGTTaGTTTGTGAGGCTGTGGATGGATAGTTATATTGCC +
Preference number: 6 (lower is better)
Translates to: IQLVGMMHEDNG*FVRLWMDSYIA
Trigger: GGCAATATAACTATCCATCCACAGCCTCACAAACAAACCATTGTCCTCGTGCATCATCCCAACCAACTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS CAA 90 bp AAGGAGGGATATGAATATCCAACACTTCGGCTCATTTTGGGATTCTaGTTAGTAAGCTGTGGTGTTGCCAATAAGCCACCTCCTTCAATC +
Preference number: 6 (lower is better)
Translates to: KEGYEYPTLRLILGF*LVSCGVANKPPPSI
Trigger: GATTGAAGGAGGTGGCTTATTGGCAACACCACAGCTTACTAACAAGAATCCCAAAATGAGCCGAAGTGTTGGATATTCATATCCCTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS TCA 72 bp GGCTTCAAAGGTGTTGACGGAAGCATGTTTCTTTCTTaGAGAAGATTGACAACTCTTAGACCCTCTGGTTGT +
Preference number: 6 (lower is better)
Translates to: GFKGVDGSMFLS*RRLTTLRPSGC
Trigger: ACAACCAGAGGGTCTAAGAGTTGTCAATCTTCTTCAAGAAAGAAACATGCTTCCGTCAACACCTTTGAAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS TCA 72 bp AAAGGAAGTTTGGCTTTATTCAATAAGGCCTGCGTCTaGGGAATGCTAGTCAGCGTGCATCGAAATAACTCT +
Preference number: 6 (lower is better)
Translates to: KGSLALFNKACV*GMLVSVHRNNS
Trigger: AGAGTTATTTCGATGCACGCTGACTAGCATTCCTCAGACGCAGGCCTTATTGAATAAAGCCAAACTTCCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS CCA 72 bp GTGCATCGAAATAACTCTGGGTTACAGTTGAGTTTCTaGATGTCTTCATGCAAATTTGGAACTGGAGGCTTC +
Preference number: 6 (lower is better)
Translates to: VHRNNSGLQLSF*MSSCKFGTGGF
Trigger: GAAGCCTCCAGTTCCAAATTTGCATGAAGACATCCAGAAACTCAACTGTAACCCAGAGTTATTTCGATGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS CCA 72 bp AAGCCAAGAGATGAAAGCTATTATTCTGGCAGATTCTaGTGTATCAAGTTCTGGAAGGTCTGTCATAGGCTG +
Preference number: 6 (lower is better)
Translates to: KPRDESYYSGRF*CIKFWKVCHRL
Trigger: CAGCCTATGACAGACCTTCCAGAACTTGATACACCAGAATCTGCCAGAATAATAGCTTTCATCTCTTGGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000398844.7
CDS CCA 72 bp TTGCCAGGAAGCAAATCCAGATTGTCTAACAAACTCTaGCAAACTGAATTCAAGTATCCAGTTTCGACTGCA +
Preference number: 6 (lower is better)
Translates to: LPGSKSRLSNKL*QTEFKYPVSTA
Trigger: TGCAGTCGAAACTGGATACTTGAATTCAGTTTGCCAGAGTTTGTTAGACAATCTGGATTTGCTTCCTGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322887.8
ENST00000398844.7
ENST00000513123.1
CDS CAA 72 bp TATGAATATCCAACACTTCGGCTCATTTTGGGATTCTaGTTAGTAAGCTGTGGTGTTGCCAATAAGCCACCT +
Preference number: 6 (lower is better)
Translates to: YEYPTLRLILGF*LVSCGVANKPP
Trigger: AGGTGGCTTATTGGCAACACCACAGCTTACTAACAAGAATCCCAAAATGAGCCGAAGTGTTGGATATTCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS CAA 72 bp CTAGTCAGCGTGCATCGAAATAACTCTGGGTTACAGTaGAGTTTCTGGATGTCTTCATGCAAATTTGGAACT +
Preference number: 6 (lower is better)
Translates to: LVSVHRNNSGLQ*SFWMSSCKFGT
Trigger: AGTTCCAAATTTGCATGAAGACATCCAGAAACTCAACTGTAACCCAGAGTTATTTCGATGCACGCTGACTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS CAA 90 bp TATTTCCAGATACAGTTGGTTGGGATGATGCACGAGGACAATGGTTaGTTTGTGAGGCTGTGGATGGATAGTTATATTGCCAATTCAAAG +
Preference number: 6 (lower is better)
Translates to: YFQIQLVGMMHEDNG*FVRLWMDSYIANSK
Trigger: CTTTGAATTGGCAATATAACTATCCATCCACAGCCTCACAAACAAACCATTGTCCTCGTGCATCATCCCAACCAACTGTATCTGGAAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7
CDS TCA 72 bp CAAACTGAATTCAAGTATCCAGTTTCGACTGCATTGTaGGACACATCAAATACAAAGAGATACACTGGAGGC +
Preference number: 6 (lower is better)
Translates to: QTEFKYPVSTAL*DTSNTKRYTGG
Trigger: GCCTCCAGTGTATCTCTTTGTATTTGATGTGTCTCACAATGCAGTCGAAACTGGATACTTGAATTCAGTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322887.8
ENST00000398844.7
ENST00000513123.1
CDS CCA 72 bp TTTGTGGTTAAACTTGTATTTCCAGATACAGTTGGTTaGGATGATGCACGAGGACAATGGTTTGTTTGTGAG +
Preference number: 6 (lower is better)
Translates to: FVVKLVFPDTVG*DDARGQWFVCE
Trigger: CTCACAAACAAACCATTGTCCTCGTGCATCATCCCAACCAACTGTATCTGGAAATACAAGTTTAACCACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322887.8
ENST00000398844.7