Pregenerated sensors for SEC23A (Homo sapiens)
Ensembl gene IDs: ENSG00000100934Ensembl transcript IDs: ENST00000307712.11, ENST00000537403.5, ENST00000545328.6, ENST00000548032.6, ENST00000553970.1, ENST00000554615.1, ENST00000555017.5, ENST00000555363.1, ENST00000555682.1, ENST00000556092.5, ENST00000557280.5, ENST00000557437.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 72 bp | GTGAGCAAGAAAATTCAGTGCCACTTTGGGTCTGTCTaGAATATACAAATGAGTTACATCTGTAGTACGAGG | + |
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Preference number: 3 (lower is better) Translates to: VSKKIQCHFGSV*NIQMSYICSTR Trigger: CCTCGTACTACAGATGTAACTCATTTGTATATTGCAGACAGACCCAAAGTGGCACTGAATTTTCTTGCTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000307712.11 ENST00000537403.5 |
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| 3UTR TCA 72 bp | TTCAGTGCCACTTTGGGTCTGTCTGCAATATACAAATaGGTTACATCTGTAGTACGAGGCAGACTCTATTTT | + |
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Preference number: 3 (lower is better) Translates to: FSATLGLSAIYK*VTSVVRGRLYF Trigger: AAAATAGAGTCTGCCTCGTACTACAGATGTAACTCATTTGTATATTGCAGACAGACCCAAAGTGGCACTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000307712.11 ENST00000537403.5 |
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| CDS-3UTR CCA 90 bp | TGTATTTCTCATTCCAAGAATAAGAAGCTACTACTGGAAGATGTTCATCATCTGTCCGCCCGGCCAACATaGCTGGCGCCGCCTCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: CISHSKNKKLLLEDVHHLSARPT*LAPPLP Trigger: TGGCAGAGGCGGCGCCAGCCATGTTGGCCGGGCGGA...CAGATGATGAACATCTTCCAGTAGTAGCTTCTTATTCTTGGAATGAGAAATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000553970.1 |
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| CDS-3UTR CCA 90 bp | GAGTTTGTATTTCTCATTCCAAGAATAAGAAGCTACTACTGGAAGATGTTCATCCCCGGCCAACATGGCTaGCGCCGCCTCTGCCACGTC | + |
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Preference number: 4 (lower is better) Translates to: EFVFLIPRIRSYYWKMFIPGQHG*RRLCHV Trigger: GACGTGGCAGAGGCGGCGCCAGCCATGTTGGCCGGG...GATGAACATCTTCCAGTAGTAGCTTCTTATTCTTGGAATGAGAAATACAAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000553970.1 |
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| CDS-3UTR GCA 90 bp | GAGTTTGTATTTCTCATTCCAAGAATAAGAAGCTACTACTGGAAGATGTTCATCTCCTCACTGTCCCCCTaGAGGACCCGTCGCAGCCTC | + |
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Preference number: 4 (lower is better) Translates to: EFVFLIPRIRSYYWKMFISSLSP*RTRRSL Trigger: GAGGCTGCGACGGGTCCTGCAGGGGGACAGTGAGGA...GATGAACATCTTCCAGTAGTAGCTTCTTATTCTTGGAATGAGAAATACAAACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000553970.1 ENST00000557280.5 |
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| CDS-3UTR GCA 90 bp | TGTATTTCTCATTCCAAGAATAAGAAGCTACTACTGGAAGATGTTCATCATCTGTCCTCACTGTCCCCCTaGAGGACCCGTCGCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CISHSKNKKLLLEDVHHLSSLSP*RTRRSL Trigger: GAGGCTGCGACGGGTCCTGCAGGGGGACAGTGAGGA...CAGATGATGAACATCTTCCAGTAGTAGCTTCTTATTCTTGGAATGAGAAATACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000553970.1 ENST00000557280.5 |
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| CDS-3UTR CCA 90 bp | TGTATTTCTCATTCCAAGAATAAGAAGCTACTACTGGAAGATGTTCATCATCTGAGCAGGAGCAGTCCGTaGCACCGCAATCAGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CISHSKNKKLLLEDVHHLSRSSP*HRNQGW Trigger: CCACCCCTGATTGCGGTGCCACGGACTGCTCCTGCT...CAGATGATGAACATCTTCCAGTAGTAGCTTCTTATTCTTGGAATGAGAAATACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553970.1 ENST00000557280.5 |
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| CDS-3UTR CCA 90 bp | GAGTTTGTATTTCTCATTCCAAGAATAAGAAGCTACTACTGGAAGATGTTCATCAGCAGGAGCAGTCCGTaGCACCGCAATCAGGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EFVFLIPRIRSYYWKMFISRSSP*HRNQGW Trigger: CCACCCCTGATTGCGGTGCCACGGACTGCTCCTGCT...GATGAACATCTTCCAGTAGTAGCTTCTTATTCTTGGAATGAGAAATACAAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553970.1 ENST00000557280.5 |
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| CDS-3UTR GCA 90 bp | TGTATTTCTCATTCCAAGAATAAGAAGCTACTACTGGAAGATGTTCATCATCTGTCGCAGCCTCCGCTTTaGAAAATCTGTCCTCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: CISHSKNKKLLLEDVHHLSQPPL*KICPLR Trigger: GCGGAGAGGACAGATTTTGCAAAGCGGAGGCTGCGA...CAGATGATGAACATCTTCCAGTAGTAGCTTCTTATTCTTGGAATGAGAAATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553970.1 ENST00000557280.5 |
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| CDS-3UTR GCA 90 bp | GAGTTTGTATTTCTCATTCCAAGAATAAGAAGCTACTACTGGAAGATGTTCATCTTTGATTCTTATTTCTaGGGTCCCCCAGGAGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: EFVFLIPRIRSYYWKMFIFDSYF*GPPGAE Trigger: CTCCGCTCCTGGGGGACCGCAGAAATAAGAATCAAA...GATGAACATCTTCCAGTAGTAGCTTCTTATTCTTGGAATGAGAAATACAAACTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000553970.1 ENST00000557280.5 |
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| CDS-3UTR CCA 90 bp | GAGTTTGTATTTCTCATTCCAAGAATAAGAAGCTACTACTGGAAGATGTTCATCAGGTCTCTCTTTCAGTaGTGTAAACAGGGCTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EFVFLIPRIRSYYWKMFIRSLFQ*CKQGCH Trigger: GTGGCAGCCCTGTTTACACCACTGAAAGAGAGACCT...GATGAACATCTTCCAGTAGTAGCTTCTTATTCTTGGAATGAGAAATACAAACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553970.1 ENST00000557280.5 |
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| CDS-3UTR TCA 90 bp | GAGTTTGTATTTCTCATTCCAAGAATAAGAAGCTACTACTGGAAGATGTTCATCAGCTTCCAGTCGACTTaGTGGCCAAACATTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: EFVFLIPRIRSYYWKMFISFQST*WPNIPT Trigger: AGTTGGAATGTTTGGCCATCAAGTCGACTGGAAGCT...GATGAACATCTTCCAGTAGTAGCTTCTTATTCTTGGAATGAGAAATACAAACTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553970.1 ENST00000557280.5 |
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| CDS-3UTR GCA 90 bp | TGTATTTCTCATTCCAAGAATAAGAAGCTACTACTGGAAGATGTTCATCATCTGTGGTGTAAACAGGGCTaGCACAGGAACAACCATTCT | + |
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Preference number: 4 (lower is better) Translates to: CISHSKNKKLLLEDVHHLWCKQG*HRNNHS Trigger: AGAATGGTTGTTCCTGTGGCAGCCCTGTTTACACCA...CAGATGATGAACATCTTCCAGTAGTAGCTTCTTATTCTTGGAATGAGAAATACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553970.1 ENST00000557280.5 |
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| CDS-3UTR CCA 90 bp | TGTATTTCTCATTCCAAGAATAAGAAGCTACTACTGGAAGATGTTCATCATCTGAAACTGCACGGCAAGTaGTCCTACTACACAGAACAG | + |
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Preference number: 4 (lower is better) Translates to: CISHSKNKKLLLEDVHHLKLHGK*SYYTEQ Trigger: CTGTTCTGTGTAGTAGGACCACTTGCCGTGCAGTTT...CAGATGATGAACATCTTCCAGTAGTAGCTTCTTATTCTTGGAATGAGAAATACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553970.1 ENST00000557280.5 |
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| CDS-3UTR TCA 90 bp | GAGTTTGTATTTCTCATTCCAAGAATAAGAAGCTACTACTGGAAGATGTTCATCTGTCATTGTGGAGTTTaGTTCTTATTTCTGCGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EFVFLIPRIRSYYWKMFICHCGV*FLFLRS Trigger: GGACCGCAGAAATAAGAATCAAACTCCACAATGACA...GATGAACATCTTCCAGTAGTAGCTTCTTATTCTTGGAATGAGAAATACAAACTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553970.1 ENST00000557280.5 |
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| CDS-3UTR TCA 90 bp | TGTATTTCTCATTCCAAGAATAAGAAGCTACTACTGGAAGATGTTCATCATCTGAGAACAGGTTCATATTaGATAGGTGGTAAGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CISHSKNKKLLLEDVHHLRTGSY*IGGKSG Trigger: ACCTGACTTACCACCTATTCAATATGAACCTGTTCT...CAGATGATGAACATCTTCCAGTAGTAGCTTCTTATTCTTGGAATGAGAAATACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553970.1 ENST00000557280.5 |
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| CDS GCA 90 bp | CCTTTCCTCACTGTCCCCCTGCAGGACCCGTCGCAGCCTCCGCTTTaGAAAATCTGTCCTCTCCGCCCAGCAGGAGCAGTCCGTGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: PFLTVPLQDPSQPPL*KICPLRPAGAVRGT Trigger: GGTGCCACGGACTGCTCCTGCTGGGCGGAGAGGACAGATTTTGCAAAGCGGAGGCTGCGACGGGTCCTGCAGGGGGACAGTGAGGAAAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000307712.11 ENST00000545328.6 ENST00000548032.6 ENST00000553970.1 ENST00000557280.5 ENST00000557437.1 |
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| CDS GCA 90 bp | GAATCTGTTGGAAGGAGGTGGCTGCTGTACCTGAGGACCACGTGTTaGTTGAGTAAGTGGTACTTTAGAGAGCCCCAGCATTTCCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: ESVGRRWLLYLRTTC*LSKWYFREPQHFLQ Trigger: CTGCAGGAAATGCTGGGGCTCTCTAAAGTACCACTTACTCAAGCAACACGTGGTCCTCAGGTACAGCAGCCACCTCCTTCCAACAGATTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000307712.11 ENST00000545328.6 |
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| CDS TCA 90 bp | ACTCCTGCCCCCAGGCATACATATTATTATGAGTCTGTGAAGGGTTaGCTTTTGAAAGGAGGAAACGGGCCTGGCTGCCTCCATGTTCAG | + |
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Preference number: 5 (lower is better) Translates to: TPAPRHTYYYESVKG*LLKGGNGPGCLHVQ Trigger: CTGAACATGGAGGCAGCCAGGCCCGTTTCCTCCTTTCAAAAGTCAACCCTTCACAGACTCATAATAATATGTATGCCTGGGGGCAGGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000307712.11 ENST00000537403.5 ENST00000545328.6 ENST00000555363.1 |
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| CDS GCA 90 bp | GAATCTGTTGGAAGGAGGTGGCTGCTGTACCTGAGGACCACGTGTTaGTTGAGTAAGTGGTACTTTAGAGAGCCCCAGCATTTCTTTGTA | + |
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Preference number: 5 (lower is better) Translates to: ESVGRRWLLYLRTTC*LSKWYFREPQHFFV Trigger: TACAAAGAAATGCTGGGGCTCTCTAAAGTACCACTTACTCAAGCAACACGTGGTCCTCAGGTACAGCAGCCACCTCCTTCCAACAGATTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537403.5 |
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| CDS TCA 90 bp | GTGGTACAGGCCAAGGGTCTCGCTGGAGTTCTCCCAGAAGATCTGTaGGATTCATGTCTATTTTCTGTACTGGTTGTAAGAATCTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VVQAKGLAGVLPEDL*DSCLFSVLVVRICW Trigger: CCAACAGATTCTTACAACCAGTACAGAAAATAGACATGAATCTCACAGATCTTCTGGGAGAACTCCAGCGAGACCCTTGGCCTGTACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000307712.11 ENST00000537403.5 ENST00000545328.6 |
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| CDS TCA 90 bp | ACTGAAACTTACTATGTGCCAGACACAATTGAGATGCTGGTAATATaGTGCAGGCAAAGTAGGCCCAGATCCCTGGCCCGAAAGAATTCA | + |
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Preference number: 5 (lower is better) Translates to: TETYYVPDTIEMLVI*CRQSRPRSLARKNS Trigger: TGAATTCTTTCGGGCCAGGGATCTGGGCCTACTTTGCCTGCATCATATTACCAGCATCTCAATTGTGTCTGGCACATAGTAAGTTTCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557437.1 |
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| CDS GCA 90 bp | CTGTTCACATTTTCTTGTTCAACCAAAGCTAGTATACCACCACAATaGCATCCTGGCCCTGTTCAGGAAGCTAGGCTAGAGACAGAAGAT | + |
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Preference number: 5 (lower is better) Translates to: LFTFSCSTKASIPPQ*HPGPVQEARLETED Trigger: ATCTTCTGTCTCTAGCCTAGCTTCCTGAACAGGGCCAGGATGGCATTGTGGTGGTATACTAGCTTTGGTTGAACAAGAAAATGTGAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554615.1 |
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| CDS TCA 90 bp | TATATGGCTAAGGTTGTAGTGGGACTAAGTCCACATATCTTCCACTaGCATGTGCCACCTGTTCCTATCTCATTTTCAGACACACAGGGT | + |
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Preference number: 5 (lower is better) Translates to: YMAKVVVGLSPHIFH*HVPPVPISFSDTQG Trigger: ACCCTGTGTGTCTGAAAATGAGATAGGAACAGGTGGCACATGTCAGTGGAAGATATGTGGACTTAGTCCCACTACAACCTTAGCCATATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000307712.11 ENST00000537403.5 ENST00000545328.6 |
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| CDS-3UTR CAA 90 bp | TGTATTTCTCATTCCAAGAATAAGAAGCTACTACTGGAAGATGTTCATCATCTGGTCGCAGCCTCCGCTTaGCAAAATCTGTCCTCTCCG | + |
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Preference number: 5 (lower is better) Translates to: CISHSKNKKLLLEDVHHLVAASA*QNLSSP Trigger: CGGAGAGGACAGATTTTGCAAAGCGGAGGCTGCGAC...CAGATGATGAACATCTTCCAGTAGTAGCTTCTTATTCTTGGAATGAGAAATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000553970.1 ENST00000557280.5 |
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| CDS GCA 90 bp | ATAAGTCCAACCAAAGCTGTAGGTGGTAAAAGACTTAATGACATCTaGATGGATTCTTTCAGGGCTTGTAAATCTTCATCTTCCATGCAA | + |
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Preference number: 5 (lower is better) Translates to: ISPTKAVGGKRLNDI*MDSFRACKSSSSMQ Trigger: TTGCATGGAAGATGAAGATTTACAAGCCCTGAAAGAATCCATGCAGATGTCATTAAGTCTTTTACCACCTACAGCTTTGGTTGGACTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000307712.11 ENST00000545328.6 ENST00000555017.5 ENST00000555682.1 |
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| CDS-3UTR CAA 90 bp | GAGTTTGTATTTCTCATTCCAAGAATAAGAAGCTACTACTGGAAGATGTTCATCTTGTCATTGTGGAGTTaGATTCTTATTTCTGCGGTC | + |
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Preference number: 5 (lower is better) Translates to: EFVFLIPRIRSYYWKMFILSLWS*ILISAV Trigger: GACCGCAGAAATAAGAATCAAACTCCACAATGACAA...GATGAACATCTTCCAGTAGTAGCTTCTTATTCTTGGAATGAGAAATACAAACTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553970.1 ENST00000557280.5 |
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| CDS-3UTR CAA 90 bp | TGTATTTCTCATTCCAAGAATAAGAAGCTACTACTGGAAGATGTTCATCATCTGTTGTCATTGTGGAGTTaGATTCTTATTTCTGCGGTC | + |
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Preference number: 5 (lower is better) Translates to: CISHSKNKKLLLEDVHHLLSLWS*ILISAV Trigger: GACCGCAGAAATAAGAATCAAACTCCACAATGACAA...CAGATGATGAACATCTTCCAGTAGTAGCTTCTTATTCTTGGAATGAGAAATACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000553970.1 ENST00000557280.5 |
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| CDS CCA 72 bp | CCCCGGGCCTCAGCGAAGACCTCCGCCCGGCCAACATaGCTGGCGCCGCCTCGAGAGAAATGGAGACGGCCT | + |
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Preference number: 6 (lower is better) Translates to: PRASAKTSARPT*LAPPREKWRRP Trigger: AGGCCGTCTCCATTTCTCTCGAGGCGGCGCCAGCCATGTTGGCCGGGCGGAGGTCTTCGCTGAGGCCCGGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000557437.1 |
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| CDS CAA 72 bp | CACTGTCCCCCTGCAGGACCCGTCGCAGCCTCCGCTTaGCAAAATCTGTCCTCTCCGCCCGGCCAACATGGC | + |
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Preference number: 6 (lower is better) Translates to: HCPPAGPVAASA*QNLSSPPGQHG Trigger: GCCATGTTGGCCGGGCGGAGAGGACAGATTTTGCAAAGCGGAGGCTGCGACGGGTCCTGCAGGGGGACAGTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000556092.5 |
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| CDS CAA 90 bp | CCCTTTCCTCACTGTCCCCCTGCAGGACCCGTCGCAGCCTCCGCTTaGCAAAATCTGTCCTCTCCGCCCAGCAGGAGCAGTCCGTGGCAC | + |
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Preference number: 6 (lower is better) Translates to: PFPHCPPAGPVAASA*QNLSSPPSRSSPWH Trigger: GTGCCACGGACTGCTCCTGCTGGGCGGAGAGGACAGATTTTGCAAAGCGGAGGCTGCGACGGGTCCTGCAGGGGGACAGTGAGGAAAGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000307712.11 ENST00000545328.6 ENST00000548032.6 ENST00000553970.1 ENST00000557280.5 ENST00000557437.1 |
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| CDS GCA 72 bp | ACTGTCCCCCTGCAGGACCCGTCGCAGCCTCCGCTTTaGAAAATCTGTCCTCTCCGCCCAGCAGGAGCAGTC | + |
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Preference number: 6 (lower is better) Translates to: TVPLQDPSQPPL*KICPLRPAGAV Trigger: GACTGCTCCTGCTGGGCGGAGAGGACAGATTTTGCAAAGCGGAGGCTGCGACGGGTCCTGCAGGGGGACAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000307712.11 ENST00000545328.6 ENST00000548032.6 ENST00000553970.1 ENST00000557280.5 ENST00000557437.1 |
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| CDS GCA 72 bp | AGCGGAGACGAGGCGGCCCTTTCCTCACTGTCCCCCTaGAGGACCCGTCGCAGCCTCCGCTTTGCAAAATCT | + |
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Preference number: 6 (lower is better) Translates to: SGDEAALSSLSP*RTRRSLRFAKS Trigger: AGATTTTGCAAAGCGGAGGCTGCGACGGGTCCTGCAGGGGGACAGTGAGGAAAGGGCCGCCTCGTCTCCGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000307712.11 ENST00000545328.6 ENST00000548032.6 ENST00000553970.1 ENST00000556092.5 ENST00000557280.5 ENST00000557437.1 |
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| CDS GCA 72 bp | ACTGTCCCCCTGCAGGACCCGTCGCAGCCTCCGCTTTaGAAAATCTGTCCTCTCCGCCCGGCCAACATGGCT | + |
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Preference number: 6 (lower is better) Translates to: TVPLQDPSQPPL*KICPLRPANMA Trigger: AGCCATGTTGGCCGGGCGGAGAGGACAGATTTTGCAAAGCGGAGGCTGCGACGGGTCCTGCAGGGGGACAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000556092.5 |
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| CDS CAA 72 bp | CACTGTCCCCCTGCAGGACCCGTCGCAGCCTCCGCTTaGCAAAATCTGTCCTCTCCGCCCAGCAGGAGCAGT | + |
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Preference number: 6 (lower is better) Translates to: HCPPAGPVAASA*QNLSSPPSRSS Trigger: ACTGCTCCTGCTGGGCGGAGAGGACAGATTTTGCAAAGCGGAGGCTGCGACGGGTCCTGCAGGGGGACAGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000307712.11 ENST00000545328.6 ENST00000548032.6 ENST00000553970.1 ENST00000557280.5 ENST00000557437.1 |
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| CDS CCA 72 bp | GGTCTCTTTCCCTGTGGTACAGGCCAAGGGTCTCGCTaGAGTTCTCCCAGAAGATCTGTGAGATTCATGTCT | + |
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Preference number: 6 (lower is better) Translates to: GLFPCGTGQGSR*SSPRRSVRFMS Trigger: AGACATGAATCTCACAGATCTTCTGGGAGAACTCCAGCGAGACCCTTGGCCTGTACCACAGGGAAAGAGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307712.11 ENST00000537403.5 ENST00000545328.6 |
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| CDS CAA 90 bp | TCTGTTGGAAGGAGGTGGCTGCTGTACCTGAGGACCACGTGTTGCTaGAGTAAGTGGTACTTTAGAGAGCCCCAGCATTTCCTGCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: SVGRRWLLYLRTTCC*SKWYFREPQHFLQL Trigger: CAACTGCAGGAAATGCTGGGGCTCTCTAAAGTACCACTTACTCAAGCAACACGTGGTCCTCAGGTACAGCAGCCACCTCCTTCCAACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000307712.11 ENST00000545328.6 |
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| CDS CCA 72 bp | CTGCTGTACCTGAGGACCACGTGTTGCTTGAGTAAGTaGTACTTTAGAGAGCCCCAGCATTTCCTGCAGTTG | + |
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Preference number: 6 (lower is better) Translates to: LLYLRTTCCLSK*YFREPQHFLQL Trigger: CAACTGCAGGAAATGCTGGGGCTCTCTAAAGTACCACTTACTCAAGCAACACGTGGTCCTCAGGTACAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000307712.11 ENST00000545328.6 |
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| CDS CAA 90 bp | TCTGTTGGAAGGAGGTGGCTGCTGTACCTGAGGACCACGTGTTGCTaGAGTAAGTGGTACTTTAGAGAGCCCCAGCATTTCTTTGTACCT | + |
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Preference number: 6 (lower is better) Translates to: SVGRRWLLYLRTTCC*SKWYFREPQHFFVP Trigger: AGGTACAAAGAAATGCTGGGGCTCTCTAAAGTACCACTTACTCAAGCAACACGTGGTCCTCAGGTACAGCAGCCACCTCCTTCCAACAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537403.5 |
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| CDS TCA 72 bp | TACTATGTGCCAGACACAATTGAGATGCTGGTAATATaGTGCAGGCAAAGTAGGCCCAGATCCCTGGCCCGA | + |
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Preference number: 6 (lower is better) Translates to: YYVPDTIEMLVI*CRQSRPRSLAR Trigger: TCGGGCCAGGGATCTGGGCCTACTTTGCCTGCATCATATTACCAGCATCTCAATTGTGTCTGGCACATAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000557437.1 |
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| CDS CAA 90 bp | AATGGCAGCTGCCTCCTGGTCAAAAGATGCAGCAATGTTTTGGATTaGAGTTTGAGCATCTGCCCAGTTCCTAGCAATGGTGGTCACTCG | + |
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Preference number: 6 (lower is better) Translates to: NGSCLLVKRCSNVLD*SLSICPVPSNGGHS Trigger: CGAGTGACCACCATTGCTAGGAACTGGGCAGATGCTCAAACTCAAATCCAAAACATTGCTGCATCTTTTGACCAGGAGGCAGCTGCCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000307712.11 ENST00000537403.5 ENST00000545328.6 |
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| CDS TCA 72 bp | CCCAGGCATACATATTATTATGAGTCTGTGAAGGGTTaGCTTTTGAAAGGAGGAAACGGGCCTGGCTGCCTC | + |
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Preference number: 6 (lower is better) Translates to: PRHTYYYESVKG*LLKGGNGPGCL Trigger: GAGGCAGCCAGGCCCGTTTCCTCCTTTCAAAAGTCAACCCTTCACAGACTCATAATAATATGTATGCCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000307712.11 ENST00000537403.5 ENST00000545328.6 ENST00000555363.1 |
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| CDS CCA 72 bp | CTGCTGTACCTGAGGACCACGTGTTGCTTGAGTAAGTaGTACTTTAGAGAGCCCCAGCATTTCTTTGTACCT | + |
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Preference number: 6 (lower is better) Translates to: LLYLRTTCCLSK*YFREPQHFFVP Trigger: AGGTACAAAGAAATGCTGGGGCTCTCTAAAGTACCACTTACTCAAGCAACACGTGGTCCTCAGGTACAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537403.5 |
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| CDS GCA 72 bp | TTTTCTTGTTCAACCAAAGCTAGTATACCACCACAATaGCATCCTGGCCCTGTTCAGGAAGCTAGGCTAGAG | + |
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Preference number: 6 (lower is better) Translates to: FSCSTKASIPPQ*HPGPVQEARLE Trigger: CTCTAGCCTAGCTTCCTGAACAGGGCCAGGATGGCATTGTGGTGGTATACTAGCTTTGGTTGAACAAGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000554615.1 |
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| CDS TCA 72 bp | GCCAAGGGTCTCGCTGGAGTTCTCCCAGAAGATCTGTaGGATTCATGTCTATTTTCTGTACTGGTTGTAAGA | + |
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Preference number: 6 (lower is better) Translates to: AKGLAGVLPEDL*DSCLFSVLVVR Trigger: TCTTACAACCAGTACAGAAAATAGACATGAATCTCACAGATCTTCTGGGAGAACTCCAGCGAGACCCTTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000307712.11 ENST00000537403.5 ENST00000545328.6 |
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| CDS TCA 72 bp | TCAGTGTCAATGTATCTTGGCATTGGAAATCTGGAGTaGAGAATTTCCTGTGCATCATCCACTGGGGCTTGC | + |
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Preference number: 6 (lower is better) Translates to: SVSMYLGIGNLE*RISCASSTGAC Trigger: GCAAGCCCCAGTGGATGATGCACAGGAAATTCTTCACTCCAGATTTCCAATGCCAAGATACATTGACACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000307712.11 ENST00000537403.5 ENST00000545328.6 ENST00000554615.1 ENST00000555363.1 |
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| CDS TCA 72 bp | GCTCCAGACTCCTGCCCCCAGGCATACATATTATTATaGGTCTGTGAAGGGTTGACTTTTGAAAGGAGGAAA | + |
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Preference number: 6 (lower is better) Translates to: APDSCPQAYILL*VCEGLTFERRK Trigger: TTTCCTCCTTTCAAAAGTCAACCCTTCACAGACTCATAATAATATGTATGCCTGGGGGCAGGAGTCTGGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000307712.11 ENST00000537403.5 ENST00000545328.6 ENST00000554615.1 ENST00000555363.1 |
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| CDS TCA 72 bp | AAACCCAGGATCATACAACCAGAAGAGTTTAAGATTTaGATCCAGGACTATCTGGGGAGCAAAGGCCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: KPRIIQPEEFKI*IQDYLGSKGQA Trigger: AGCCTGGCCTTTGCTCCCCAGATAGTCCTGGATTCAAATCTTAAACTCTTCTGGTTGTATGATCCTGGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537403.5 |
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| CDS TCA 72 bp | TTGAATGAATTCCAAATAGGTTGTCATTGTGGAGTTTaGTTCTTATTTCTGCGGTCCCCCAGGAGCGGAGAC | + |
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Preference number: 6 (lower is better) Translates to: LNEFQIGCHCGV*FLFLRSPRSGD Trigger: GTCTCCGCTCCTGGGGGACCGCAGAAATAAGAATCAAACTCCACAATGACAACCTATTTGGAATTCATTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000307712.11 ENST00000545328.6 ENST00000548032.6 ENST00000553970.1 ENST00000556092.5 ENST00000557280.5 ENST00000557437.1 |
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| CDS TCA 72 bp | AAGGTTGTAGTGGGACTAAGTCCACATATCTTCCACTaGCATGTGCCACCTGTTCCTATCTCATTTTCAGAC | + |
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Preference number: 6 (lower is better) Translates to: KVVVGLSPHIFH*HVPPVPISFSD Trigger: GTCTGAAAATGAGATAGGAACAGGTGGCACATGTCAGTGGAAGATATGTGGACTTAGTCCCACTACAACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000307712.11 ENST00000537403.5 ENST00000545328.6 |
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| CDS CAA 72 bp | CCTATCTCATTTTCAGACACACAGGGTCCTTTAGAATaGAGTGACACACAGGGTCCAATAGCTCCTGAAATC | + |
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Preference number: 6 (lower is better) Translates to: PISFSDTQGPLE*SDTQGPIAPEI Trigger: GATTTCAGGAGCTATTGGACCCTGTGTGTCACTCAATTCTAAAGGACCCTGTGTGTCTGAAAATGAGATAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000307712.11 ENST00000537403.5 ENST00000545328.6 |
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| CDS CAA 90 bp | CCACCTGTTCCTATCTCATTTTCAGACACACAGGGTCCTTTAGAATaGAGTGACACACAGGGTCCAATAGCTCCTGAAATCTTTATTTCC | + |
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Preference number: 6 (lower is better) Translates to: PPVPISFSDTQGPLE*SDTQGPIAPEIFIS Trigger: GGAAATAAAGATTTCAGGAGCTATTGGACCCTGTGTGTCACTCAATTCTAAAGGACCCTGTGTGTCTGAAAATGAGATAGGAACAGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000307712.11 ENST00000537403.5 ENST00000545328.6 |
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| CDS GCA 72 bp | AATCTGGAAGAATGTGTCCATGAGAAGAATACGATCTaGAAGAATGCTACTGCTATCAAGAAGAACCGGCTC | + |
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Preference number: 6 (lower is better) Translates to: NLEECVHEKNTI*KNATAIKKNRL Trigger: GAGCCGGTTCTTCTTGATAGCAGTAGCATTCTTGCAGATCGTATTCTTCTCATGGACACATTCTTCCAGATT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000307712.11 ENST00000537403.5 ENST00000545328.6 |
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| CDS CCA 72 bp | CACAAACTGGATTGCACCACGCCCTCCTTGAGGAATTaGAGCATTATGCTGATTGACAACCTCAAAATATAT | + |
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Preference number: 6 (lower is better) Translates to: HKLDCTTPSLRN*SIMLIDNLKIY Trigger: ATATATTTTGAGGTTGTCAATCAGCATAATGCTCCAATTCCTCAAGGAGGGCGTGGTGCAATCCAGTTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000307712.11 ENST00000537403.5 ENST00000545328.6 |
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| CDS CCA 72 bp | AACCAGAAGAGTTTAAGATTTGAATCCAGGACTATCTaGGGAGCAAAGGCCAGGCTCTTTTCAACTAATAAT | + |
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Preference number: 6 (lower is better) Translates to: NQKSLRFESRTI*GAKARLFSTNN Trigger: ATTATTAGTTGAAAAGAGCCTGGCCTTTGCTCCCCAGATAGTCCTGGATTCAAATCTTAAACTCTTCTGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000537403.5 |
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| CDS GCA 72 bp | ACCAAAGCTGTAGGTGGTAAAAGACTTAATGACATCTaGATGGATTCTTTCAGGGCTTGTAAATCTTCATCT | + |
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Preference number: 6 (lower is better) Translates to: TKAVGGKRLNDI*MDSFRACKSSS Trigger: AGATGAAGATTTACAAGCCCTGAAAGAATCCATGCAGATGTCATTAAGTCTTTTACCACCTACAGCTTTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000307712.11 ENST00000545328.6 ENST00000555017.5 ENST00000555682.1 |
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