Pregenerated sensors for SDHD (Homo sapiens)
Ensembl gene IDs: ENSG00000204370Ensembl transcript IDs: ENST00000526592.5, ENST00000528021.6, ENST00000530923.5, ENST00000534010.1, ENST00000640554.1
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGAGCAGTGGACTTATGAAAGCAAACACAGGAAACAGGGGAAGATaGACATGTATTAAGTCACGATTAACAGCTGGGCGCGGTGGCTCA | + |
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Preference number: 1 (lower is better) Translates to: RSSGLMKANTGNRGR*TCIKSRLTAGRGGS Trigger: TGAGCCACCGCGCCCAGCTGTTAATCGTGACTTAATACATGTGCATCTTCCCCTGTTTCCTGTGTTTGCTTTCATAAGTCCACTGCTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528021.6 |
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| 3UTR TCA 90 bp | AACCCATCTGCAAATTTTAAGGTGGTGTCATTAAGCTATGACAGATaGATGTACCCATCTTCACAGCAGGAGCAGTGGACTTATGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: NPSANFKVVSLSYDR*MYPSSQQEQWTYES Trigger: GCTTTCATAAGTCCACTGCTCCTGCTGTGAAGATGGGTACATTCATCTGTCATAGCTTAATGACACCACCTTAAAATTTGCAGATGGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528021.6 |
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| 3UTR-3UTR TCA 90 bp | AGCAGACAACTATATTTGGAATTGCTATACTTGCCAGTGACCATGAAGAGTGAGAGGAGGTCAGGAGTTTaGGACCAGCCCGGCCAACAC | + |
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Preference number: 2 (lower is better) Translates to: SRQLYLELLYLPVTMKSERRSGV*DQPGQH Trigger: GTGTTGGCCGGGCTGGTCTCAAACTCCTGACCTCCT...CTCACTCTTCATGGTCACTGGCAAGTATAGCAATTCCAAATATAGTTGTCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640554.1 |
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| 3UTR-3UTR TCA 90 bp | AACACATTTTATTGGCTTATGTGCCTGTCCATCAAGTCTGTGAGCTTCTGGTGTACTCCTGACCTCAAGTaGTCCACTCACCTTGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: NTFYWLMCLSIKSVSFWCTPDLK*STHLGL Trigger: GAGGCCAAGGTGAGTGGATCACTTGAGGTCAGGAGT...ACACCAGAAGCTCACAGACTTGATGGACAGGCACATAAGCCAATAAAATGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528021.6 |
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| 3UTR-3UTR TCA 90 bp | AGCAGACAACTATATTTGGAATTGCTATACTTGCCAGTGACCATGAAGAGTGAGGGTGGGCAGATCACCTaGGGTCAGGAGTTTGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: SRQLYLELLYLPVTMKSEGGQIT*GQEFEE Trigger: CTCCTCAAACTCCTGACCTCAGGTGATCTGCCCACC...CTCACTCTTCATGGTCACTGGCAAGTATAGCAATTCCAAATATAGTTGTCTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640554.1 |
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| 3UTR-3UTR TCA 90 bp | AGACAACTATATTTGGAATTGCTATACTTGCCAGTGACCATGAAGAGTGAGGGCCTGAGGTCAGGAGTTTaGGGAGGTCAGGAGTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: RQLYLELLYLPVTMKSEGLRSGV*GGQEFE Trigger: CTCAAACTCCTGACCTCCTCAAACTCCTGACCTCAG...GCCCTCACTCTTCATGGTCACTGGCAAGTATAGCAATTCCAAATATAGTTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640554.1 |
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| 3UTR-3UTR CCA 90 bp | AGCAGACAACTATATTTGGAATTGCTATACTTGCCAGTGACCATGAAGAGTGAGAGTACAAAACTTAGCTaGGCATGGTGGTGGGCGCCT | + |
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Preference number: 2 (lower is better) Translates to: SRQLYLELLYLPVTMKSESTKLS*AWWWAP Trigger: AGGCGCCCACCACCATGCCCAGCTAAGTTTTGTACT...CTCACTCTTCATGGTCACTGGCAAGTATAGCAATTCCAAATATAGTTGTCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640554.1 |
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| 3UTR-3UTR TCA 90 bp | AACACATTTTATTGGCTTATGTGCCTGTCCATCAAGTCTGTGAGCTTCTGGTGTGGAGCAGTGGACTTATaGAAGCAAACACAGGAAACA | + |
|
Preference number: 2 (lower is better) Translates to: NTFYWLMCLSIKSVSFWCGAVDL*KQTQET Trigger: TGTTTCCTGTGTTTGCTTTCATAAGTCCACTGCTCC...ACACCAGAAGCTCACAGACTTGATGGACAGGCACATAAGCCAATAAAATGTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528021.6 |
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| 3UTR-3UTR CCA 90 bp | AGCAGACAACTATATTTGGAATTGCTATACTTGCCAGTGACCATGAAGAGTGAGGGAGAGATGCAGCCTTaGAGCCAGCTTATGAATGTA | + |
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Preference number: 2 (lower is better) Translates to: SRQLYLELLYLPVTMKSEGEMQP*SQLMNV Trigger: TACATTCATAAGCTGGCTCCAAGGCTGCATCTCTCC...CTCACTCTTCATGGTCACTGGCAAGTATAGCAATTCCAAATATAGTTGTCTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640554.1 |
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| 3UTR-3UTR TCA 90 bp | AACACATTTTATTGGCTTATGTGCCTGTCCATCAAGTCTGTGAGCTTCTGGTGTGGTGTCATTAAGCTATaGCAGATGAATGTACCCATC | + |
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Preference number: 2 (lower is better) Translates to: NTFYWLMCLSIKSVSFWCGVIKL*QMNVPI Trigger: GATGGGTACATTCATCTGTCATAGCTTAATGACACC...ACACCAGAAGCTCACAGACTTGATGGACAGGCACATAAGCCAATAAAATGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528021.6 |
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| 3UTR-3UTR GCA 90 bp | AACACATTTTATTGGCTTATGTGCCTGTCCATCAAGTCTGTGAGCTTCTGGTGTGGAAACAGGGGAAGATaGACATGTATTAAGTCACGA | + |
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Preference number: 2 (lower is better) Translates to: NTFYWLMCLSIKSVSFWCGNRGR*TCIKSR Trigger: TCGTGACTTAATACATGTGCATCTTCCCCTGTTTCC...ACACCAGAAGCTCACAGACTTGATGGACAGGCACATAAGCCAATAAAATGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000528021.6 |
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| 3UTR-3UTR TCA 90 bp | AACACATTTTATTGGCTTATGTGCCTGTCCATCAAGTCTGTGAGCTTCTGGTGTTTAAGCTATGACAGATaGATGTACCCATCTTCACAG | + |
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Preference number: 2 (lower is better) Translates to: NTFYWLMCLSIKSVSFWCLSYDR*MYPSSQ Trigger: CTGTGAAGATGGGTACATTCATCTGTCATAGCTTAA...ACACCAGAAGCTCACAGACTTGATGGACAGGCACATAAGCCAATAAAATGTGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528021.6 |
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| 3UTR GCA 72 bp | GTCTTGCTCTGTCGCCCAAGCACGATCTTGGCTCACTaGAACCTCCACTCCCCCAGGTTCAAGCGATTCTCC | + |
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Preference number: 3 (lower is better) Translates to: VLLCRPSTILAH*NLHSPRFKRFS Trigger: GGAGAATCGCTTGAACCTGGGGGAGTGGAGGTTGCAGTGAGCCAAGATCGTGCTTGGGCGACAGAGCAAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000528021.6 |
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| 3UTR TCA 72 bp | AAGCCCAGGAGTTGGGTAATGGCCGACACAGCATGGTaGAAGCCCATCTCCTTTCTCCGCATTAAGGGAGCC | + |
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Preference number: 3 (lower is better) Translates to: KPRSWVMADTAW*KPISFLRIKGA Trigger: GGCTCCCTTAATGCGGAGAAAGGAGATGGGCTTTCACCATGCTGTGTCGGCCATTACCCAACTCCTGGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534010.1 |
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| 3UTR-3UTR CAA 90 bp | AACACATTTTATTGGCTTATGTGCCTGTCCATCAAGTCTGTGAGCTTCTGGTGTCGCCCAAGCACGATCTaGGCTCACTGCAACCTCCAC | + |
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Preference number: 3 (lower is better) Translates to: NTFYWLMCLSIKSVSFWCRPSTI*AHCNLH Trigger: GTGGAGGTTGCAGTGAGCCAAGATCGTGCTTGGGCG...ACACCAGAAGCTCACAGACTTGATGGACAGGCACATAAGCCAATAAAATGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528021.6 |
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| 3UTR-3UTR CAA 90 bp | ATAGGTTCCCAGATGACCCCAGCTGAGCAGACTTCCTCGCTTCCTTCTCCTTCCTCTGTAAGTTCTCTGTaGGATTCCAGTGTTCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: IGSQMTPAEQTSSLPSPSSVSSL*DSSVLS Trigger: AGAGAGAACACTGGAATCCAACAGAGAACTTACAGA...GGAAGGAGAAGGAAGCGAGGAAGTCTGCTCAGCTGGGGTCATCTGGGAACCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534010.1 |
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| 3UTR GCA 72 bp | GGACTTATGAAAGCAAACACAGGAAACAGGGGAAGATaGACATGTATTAAGTCACGATTAACAGCTGGGCGC | + |
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Preference number: 3 (lower is better) Translates to: GLMKANTGNRGR*TCIKSRLTAGR Trigger: GCGCCCAGCTGTTAATCGTGACTTAATACATGTGCATCTTCCCCTGTTTCCTGTGTTTGCTTTCATAAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528021.6 |
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| CDS-3UTR TCA 90 bp | ATGACCCCAGCTGAGCAGACTTCCTCGCTTCCTTCTCCTTCCTTGCTACTGGTGGCCGACACAGCATGGTaGAAGCCCATCTCCTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: MTPAEQTSSLPSPSLLLVADTAW*KPISFL Trigger: GAGAAAGGAGATGGGCTTTCACCATGCTGTGTCGGC...CACCAGTAGCAAGGAAGGAGAAGGAAGCGAGGAAGTCTGCTCAGCTGGGGTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534010.1 |
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| CDS-3UTR TCA 90 bp | GGAAGATGCACATGTATTAAGTCACGATTAACAGCTGGGCGCGGTGGCTCAGGCGGAGCAGTGGACTTATaGAAGCAAACACAGGAAACA | + |
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Preference number: 4 (lower is better) Translates to: GRCTCIKSRLTAGRGGSGGAVDL*KQTQET Trigger: TGTTTCCTGTGTTTGCTTTCATAAGTCCACTGCTCC...GCCTGAGCCACCGCGCCCAGCTGTTAATCGTGACTTAATACATGTGCATCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528021.6 |
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| CDS-3UTR TCA 90 bp | AGACAACTATATTTGGAATTGCTATACTTGCCAGTGACCATGAAGAGTGAGGGCAGGAGGTCAGGAGTTTaGGACCAGCCCGGCCAACAC | + |
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Preference number: 4 (lower is better) Translates to: RQLYLELLYLPVTMKSEGRRSGV*DQPGQH Trigger: GTGTTGGCCGGGCTGGTCTCAAACTCCTGACCTCCT...GCCCTCACTCTTCATGGTCACTGGCAAGTATAGCAATTCCAAATATAGTTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640554.1 |
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| CDS-3UTR GCA 90 bp | ATGACAGATGAATGTACCCATCTTCACAGCAGGAGCAGTGGACTTATGAAAGCAACGATCTTGGCTCACTaGAACCTCCACTCCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: MTDECTHLHSRSSGLMKATILAH*NLHSPR Trigger: CCTGGGGGAGTGGAGGTTGCAGTGAGCCAAGATCGT...TGCTTTCATAAGTCCACTGCTCCTGCTGTGAAGATGGGTACATTCATCTGTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000528021.6 |
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| CDS-3UTR TCA 90 bp | AACACATTTTATTGGCTTATGTGCCTGTCCATCAAGTCTGTGAGCTTCTGGTGTGCCGACACAGCATGGTaGAAGCCCATCTCAGTGACC | + |
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Preference number: 4 (lower is better) Translates to: NTFYWLMCLSIKSVSFWCADTAW*KPISVT Trigger: GGTCACTGAGATGGGCTTTCACCATGCTGTGTCGGC...ACACCAGAAGCTCACAGACTTGATGGACAGGCACATAAGCCAATAAAATGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528021.6 |
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| CDS-3UTR TCA 90 bp | GGAAGATGCACATGTATTAAGTCACGATTAACAGCTGGGCGCGGTGGCTCAGGCGGTGTCATTAAGCTATaGCAGATGAATGTACCCATC | + |
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Preference number: 4 (lower is better) Translates to: GRCTCIKSRLTAGRGGSGGVIKL*QMNVPI Trigger: GATGGGTACATTCATCTGTCATAGCTTAATGACACC...GCCTGAGCCACCGCGCCCAGCTGTTAATCGTGACTTAATACATGTGCATCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528021.6 |
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| CDS-3UTR TCA 90 bp | AGACAACTATATTTGGAATTGCTATACTTGCCAGTGACCATGAAGAGTGAGGGCGGTGGGCAGATCACCTaGGGTCAGGAGTTTGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: RQLYLELLYLPVTMKSEGGGQIT*GQEFEE Trigger: CTCCTCAAACTCCTGACCTCAGGTGATCTGCCCACC...GCCCTCACTCTTCATGGTCACTGGCAAGTATAGCAATTCCAAATATAGTTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640554.1 |
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| CDS-3UTR GCA 90 bp | GGAAGATGCACATGTATTAAGTCACGATTAACAGCTGGGCGCGGTGGCTCAGGCGGAAACAGGGGAAGATaGACATGTATTAAGTCACGA | + |
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Preference number: 4 (lower is better) Translates to: GRCTCIKSRLTAGRGGSGGNRGR*TCIKSR Trigger: TCGTGACTTAATACATGTGCATCTTCCCCTGTTTCC...GCCTGAGCCACCGCGCCCAGCTGTTAATCGTGACTTAATACATGTGCATCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528021.6 |
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| 3UTR CAA 72 bp | CCAGCTGAGCAGACTTCCTCGCTTCCTTCTCCTTCCTaGCTACTGGTGTTTTCTGTAAGTTCTCTGTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: PAEQTSSLPSPS*LLVFSVSSLLD Trigger: ATCCAACAGAGAACTTACAGAAAACACCAGTAGCAAGGAAGGAGAAGGAAGCGAGGAAGTCTGCTCAGCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534010.1 |
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| CDS-3UTR GCA 90 bp | AGACAACTATATTTGGAATTGCTATACTTGCCAGTGACCATGAAGAGTGAGGGCTCAGAAGGTGGAGGTTaGAGTGAGCCGAGATCGCAC | + |
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Preference number: 4 (lower is better) Translates to: RQLYLELLYLPVTMKSEGSEGGG*SEPRSH Trigger: GTGCGATCTCGGCTCACTGCAACCTCCACCTTCTGA...GCCCTCACTCTTCATGGTCACTGGCAAGTATAGCAATTCCAAATATAGTTGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640554.1 |
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| CDS-3UTR CCA 90 bp | AACACATTTTATTGGCTTATGTGCCTGTCCATCAAGTCTGTGAGCTTCTGGTGTGCCCAAGCACGATCTTaGCTCACTGCAACCTCCACT | + |
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Preference number: 4 (lower is better) Translates to: NTFYWLMCLSIKSVSFWCAQARS*LTATST Trigger: AGTGGAGGTTGCAGTGAGCCAAGATCGTGCTTGGGC...ACACCAGAAGCTCACAGACTTGATGGACAGGCACATAAGCCAATAAAATGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528021.6 |
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| CDS-3UTR CCA 90 bp | AGACAACTATATTTGGAATTGCTATACTTGCCAGTGACCATGAAGAGTGAGGGCAGTACAAAACTTAGCTaGGCATGGTGGTGGGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: RQLYLELLYLPVTMKSEGSTKLS*AWWWAP Trigger: AGGCGCCCACCACCATGCCCAGCTAAGTTTTGTACT...GCCCTCACTCTTCATGGTCACTGGCAAGTATAGCAATTCCAAATATAGTTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640554.1 |
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| CDS-3UTR TCA 90 bp | AGCAGACAACTATATTTGGAATTGCTATACTTGCCAGTGACCATGAAGAGTGAGCTGAGGTCAGGAGTTTaGGGAGGTCAGGAGTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: SRQLYLELLYLPVTMKSELRSGV*GGQEFE Trigger: CTCAAACTCCTGACCTCCTCAAACTCCTGACCTCAG...CTCACTCTTCATGGTCACTGGCAAGTATAGCAATTCCAAATATAGTTGTCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640554.1 |
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| CDS-3UTR TCA 90 bp | AGCAGACAACTATATTTGGAATTGCTATACTTGCCAGTGACCATGAAGAGTGAGGGCAGGAGAATTGCTTaGACTCAGAAGGTGGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: SRQLYLELLYLPVTMKSEGRRIA*TQKVEV Trigger: AACCTCCACCTTCTGAGTTCAAGCAATTCTCCTGCC...CTCACTCTTCATGGTCACTGGCAAGTATAGCAATTCCAAATATAGTTGTCTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640554.1 |
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| CDS-3UTR CCA 90 bp | AGACAACTATATTTGGAATTGCTATACTTGCCAGTGACCATGAAGAGTGAGGGCGGAGAGATGCAGCCTTaGAGCCAGCTTATGAATGTA | + |
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Preference number: 4 (lower is better) Translates to: RQLYLELLYLPVTMKSEGGEMQP*SQLMNV Trigger: TACATTCATAAGCTGGCTCCAAGGCTGCATCTCTCC...GCCCTCACTCTTCATGGTCACTGGCAAGTATAGCAATTCCAAATATAGTTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640554.1 |
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| CDS-3UTR TCA 90 bp | ATGACAGATGAATGTACCCATCTTCACAGCAGGAGCAGTGGACTTATGAAAGCATTAAGCTATGACAGATaGATGTACCCATCTTCACAG | + |
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Preference number: 4 (lower is better) Translates to: MTDECTHLHSRSSGLMKALSYDR*MYPSSQ Trigger: CTGTGAAGATGGGTACATTCATCTGTCATAGCTTAA...TGCTTTCATAAGTCCACTGCTCCTGCTGTGAAGATGGGTACATTCATCTGTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528021.6 |
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| CDS-3UTR CCA 90 bp | ATGACAGATGAATGTACCCATCTTCACAGCAGGAGCAGTGGACTTATGAAAGCATTGAACACATTTTATTaGCTTATGTGCCTGTCCATC | + |
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Preference number: 4 (lower is better) Translates to: MTDECTHLHSRSSGLMKALNTFY*LMCLSI Trigger: GATGGACAGGCACATAAGCCAATAAAATGTGTTCAA...TGCTTTCATAAGTCCACTGCTCCTGCTGTGAAGATGGGTACATTCATCTGTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528021.6 |
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| CDS-3UTR CCA 90 bp | AGCAGACAACTATATTTGGAATTGCTATACTTGCCAGTGACCATGAAGAGTGAGGCAGACAACTATATTTaGAATTGCTATACTTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SRQLYLELLYLPVTMKSEADNYI*NCYTCQ Trigger: CTGGCAAGTATAGCAATTCCAAATATAGTTGTCTGC...CTCACTCTTCATGGTCACTGGCAAGTATAGCAATTCCAAATATAGTTGTCTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640554.1 |
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| CDS-3UTR TCA 90 bp | GTAACAACTTGTCCAAGGCCCTGTACTTGTGATCTAATATTTCATATGCAACTGAAGGCCCTGTACTTGTaGTCTAATATTTCATATGCA | + |
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Preference number: 4 (lower is better) Translates to: VTTCPRPCTCDLIFHMQLKALYL*SNISYA Trigger: TGCATATGAAATATTAGATCACAAGTACAGGGCCTT...CAGTTGCATATGAAATATTAGATCACAAGTACAGGGCCTTGGACAAGTTGTTAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530923.5 |
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| CDS TCA 90 bp | CGCTTGAACCCGAAAGGCGGAGGTTGCAGTAAGCTGAGATCGTGCTaGGCCGAGATCGTGCCGAGCCAAGATCGCACCATTGCACTCCAG | + |
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Preference number: 5 (lower is better) Translates to: RLNPKGGGCSKLRSC*AEIVPSQDRTIALQ Trigger: CTGGAGTGCAATGGTGCGATCTTGGCTCGGCACGATCTCGGCTCAGCACGATCTCAGCTTACTGCAACCTCCGCCTTTCGGGTTCAAGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000526592.5 |
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| CDS-3UTR CAA 90 bp | ATGACAGATGAATGTACCCATCTTCACAGCAGGAGCAGTGGACTTATGAAAGCACGCCCAAGCACGATCTaGGCTCACTGCAACCTCCAC | + |
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Preference number: 5 (lower is better) Translates to: MTDECTHLHSRSSGLMKARPSTI*AHCNLH Trigger: GTGGAGGTTGCAGTGAGCCAAGATCGTGCTTGGGCG...TGCTTTCATAAGTCCACTGCTCCTGCTGTGAAGATGGGTACATTCATCTGTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528021.6 |
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| CDS-3UTR CAA 90 bp | ATAGGTTCCCAGATGACCCCAGCTGAGCAGACTTCCTCGCTTCCTTCTCCTTCCCTTCCTTCTCCTTCCTaGCTACTGGTGTTTTCTGTA | + |
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Preference number: 5 (lower is better) Translates to: IGSQMTPAEQTSSLPSPSLPSPS*LLVFSV Trigger: TACAGAAAACACCAGTAGCAAGGAAGGAGAAGGAAG...GGAAGGAGAAGGAAGCGAGGAAGTCTGCTCAGCTGGGGTCATCTGGGAACCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534010.1 |
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| CDS-3UTR CAA 90 bp | AACACATTTTATTGGCTTATGTGCCTGTCCATCAAGTCTGTGAGCTTCTGGTGTTTCACCATCAGCCTGTaGGCCAGGCTGGTCGCGAAC | + |
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Preference number: 5 (lower is better) Translates to: NTFYWLMCLSIKSVSFWCFTISL*ARLVAN Trigger: GTTCGCGACCAGCCTGGCCAACAGGCTGATGGTGAA...ACACCAGAAGCTCACAGACTTGATGGACAGGCACATAAGCCAATAAAATGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528021.6 |
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| CDS-3UTR CAA 90 bp | CAGATGACCCCAGCTGAGCAGACTTCCTCGCTTCCTTCTCCTTCCTTGCTACTGTCTGTAAGTTCTCTGTaGGATTCCAGTGTTCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: QMTPAEQTSSLPSPSLLLSVSSL*DSSVLS Trigger: AGAGAGAACACTGGAATCCAACAGAGAACTTACAGA...CAGTAGCAAGGAAGGAGAAGGAAGCGAGGAAGTCTGCTCAGCTGGGGTCATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534010.1 |
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| CDS-3UTR CAA 90 bp | GGAAGATGCACATGTATTAAGTCACGATTAACAGCTGGGCGCGGTGGCTCAGGCTTTGAACACATTTTATaGGCTTATGTGCCTGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: GRCTCIKSRLTAGRGGSGFEHIL*AYVPVH Trigger: ATGGACAGGCACATAAGCCAATAAAATGTGTTCAAA...GCCTGAGCCACCGCGCCCAGCTGTTAATCGTGACTTAATACATGTGCATCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528021.6 |
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| CDS-3UTR CAA 90 bp | AGCAGACAACTATATTTGGAATTGCTATACTTGCCAGTGACCATGAAGAGTGAGGCAGGGGCAGGAGAATaGCTTGAACTCAGAAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: SRQLYLELLYLPVTMKSEAGAGE*LELRRW Trigger: CCACCTTCTGAGTTCAAGCAATTCTCCTGCCCCTGC...CTCACTCTTCATGGTCACTGGCAAGTATAGCAATTCCAAATATAGTTGTCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000640554.1 |
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| CDS-3UTR CAA 90 bp | AGACAACTATATTTGGAATTGCTATACTTGCCAGTGACCATGAAGAGTGAGGGCTTGGAATTGCTATACTaGCCAGTGACCATGAAGAGT | + |
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Preference number: 5 (lower is better) Translates to: RQLYLELLYLPVTMKSEGLELLY*PVTMKS Trigger: ACTCTTCATGGTCACTGGCAAGTATAGCAATTCCAA...GCCCTCACTCTTCATGGTCACTGGCAAGTATAGCAATTCCAAATATAGTTGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640554.1 |
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| CDS-3UTR CAA 90 bp | AGCAGACAACTATATTTGGAATTGCTATACTTGCCAGTGACCATGAAGAGTGAGCAACTATATTTGGAATaGCTATACTTGCCAGTGACC | + |
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Preference number: 5 (lower is better) Translates to: SRQLYLELLYLPVTMKSEQLYLE*LYLPVT Trigger: GGTCACTGGCAAGTATAGCAATTCCAAATATAGTTG...CTCACTCTTCATGGTCACTGGCAAGTATAGCAATTCCAAATATAGTTGTCTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640554.1 |
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| CDS-3UTR CAA 90 bp | AGACAACTATATTTGGAATTGCTATACTTGCCAGTGACCATGAAGAGTGAGGGCAGCAGACAACTATATTaGGAATTGCTATACTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: RQLYLELLYLPVTMKSEGSRQLY*ELLYLP Trigger: TGGCAAGTATAGCAATTCCAAATATAGTTGTCTGCT...GCCCTCACTCTTCATGGTCACTGGCAAGTATAGCAATTCCAAATATAGTTGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000640554.1 |
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| CDS-3UTR CAA 90 bp | GTAACAACTTGTCCAAGGCCCTGTACTTGTGATCTAATATTTCATATGCAACTGACTGGAATCTTTTATTaGGAAAGGTCAGTGACCATG | + |
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Preference number: 5 (lower is better) Translates to: VTTCPRPCTCDLIFHMQLTGIFY*ERSVTM Trigger: CATGGTCACTGACCTTTCCAAATAAAAGATTCCAGT...CAGTTGCATATGAAATATTAGATCACAAGTACAGGGCCTTGGACAAGTTGTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530923.5 |
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| CDS TCA 72 bp | CCGAAAGGCGGAGGTTGCAGTAAGCTGAGATCGTGCTaGGCCGAGATCGTGCCGAGCCAAGATCGCACCATT | + |
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Preference number: 6 (lower is better) Translates to: PKGGGCSKLRSC*AEIVPSQDRTI Trigger: AATGGTGCGATCTTGGCTCGGCACGATCTCGGCTCAGCACGATCTCAGCTTACTGCAACCTCCGCCTTTCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000526592.5 |
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| CDS TCA 72 bp | AAGCCCAGGAGTTGGGTAATGGCCGACACAGCATGGTaGAAGCCCATCTCAGTGACCATGAAGAGTGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: KPRSWVMADTAW*KPISVTMKSEG Trigger: GCCCTCACTCTTCATGGTCACTGAGATGGGCTTTCACCATGCTGTGTCGGCCATTACCCAACTCCTGGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000528021.6 |
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