RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SDC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000162512

Ensembl transcript IDs: ENST00000336798.11, ENST00000339394.7, ENST00000471567.1

Found 644 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCCTGCACCCACATTGCACCTGGGAGAGCCTAGCTGGTCCTCACTaGACTCTCTTGGACTGCCTTGCCCCGGTCAGGCCGGCCAGGGCA +
Preference number: 1 (lower is better)
Translates to: ALHPHCTWESLAGPH*TLLDCLAPVRPARA
Trigger: TGCCCTGGCCGGCCTGACCGGGGCAAGGCAGTCCAAGAGAGTTCAGTGAGGACCAGCTAGGCTCTCCCAGGTGCAATGTGGGTGCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR GCA 90 bp CTGGGAGAGCCTAGCTGGTCCTCACTGAACTCTCTTGGACTGCCTTaGCCCGGTCAGGCCGGCCAGGGCAGATTTGGGCTGGTCAGACTC +
Preference number: 1 (lower is better)
Translates to: LGEPSWSSLNSLGLP*PGQAGQGRFGLVRL
Trigger: GAGTCTGACCAGCCCAAATCTGCCCTGGCCGGCCTGACCGGGGCAAGGCAGTCCAAGAGAGTTCAGTGAGGACCAGCTAGGCTCTCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CCA 90 bp GGACATGAGGGCCCTGCACCCACATTGCACCTGGGAGAGCCTAGCTaGTCCTCACTGAACTCTCTTGGACTGCCTTGCCCCGGTCAGGCC +
Preference number: 1 (lower is better)
Translates to: GHEGPAPTLHLGEPS*SSLNSLGLPCPGQA
Trigger: GGCCTGACCGGGGCAAGGCAGTCCAAGAGAGTTCAGTGAGGACCAGCTAGGCTCTCCCAGGTGCAATGTGGGTGCAGGGCCCTCATGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CCA 90 bp CTCTCTTGGACTGCCTTGCCCCGGTCAGGCCGGCCAGGGCAGATTTaGGCTGGTCAGACTCCTCATCCTCAGGAGGATAAAGCCTGGACA +
Preference number: 1 (lower is better)
Translates to: LSWTALPRSGRPGQI*AGQTPHPQEDKAWT
Trigger: TGTCCAGGCTTTATCCTCCTGAGGATGAGGAGTCTGACCAGCCCAAATCTGCCCTGGCCGGCCTGACCGGGGCAAGGCAGTCCAAGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CCA 90 bp GCTTCCTCACAAGCCTCTGGGCCCTGTGAAGGAGGGTTTTGGGACTaGAAGATGGAGCCCAGCCTGGAAAAGACAGGCTGTGGGACAGCC +
Preference number: 1 (lower is better)
Translates to: ASSQASGPCEGGFWD*KMEPSLEKTGCGTA
Trigger: GGCTGTCCCACAGCCTGTCTTTTCCAGGCTGGGCTCCATCTTCCAGTCCCAAAACCCTCCTTCACAGGGCCCAGAGGCTTGTGAGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CCA 90 bp TGGAGTGAGACTGTGCATCCACATGGGATTGTGTCTGACACTGGCTaGGGTTGGCGGCTGCATGGTTGGTGTGGGCACCATGGCATGGGA +
Preference number: 1 (lower is better)
Translates to: WSETVHPHGIVSDTG*GWRLHGWCGHHGMG
Trigger: TCCCATGCCATGGTGCCCACACCAACCATGCAGCCGCCAACCCCAGCCAGTGTCAGACACAATCCCATGTGGATGCACAGTCTCACTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR TCA 90 bp GGAAACCAGCCTGAGTGCCTCTCTGCCCCAAAAAGGAGATCTCAGTaGGCACTGTGGGTGCCAAGTCAGGGCTCAGGCTCATCTCAAGCC +
Preference number: 1 (lower is better)
Translates to: GNQPECLSAPKRRSQ*ALWVPSQGSGSSQA
Trigger: GGCTTGAGATGAGCCTGAGCCCTGACTTGGCACCCACAGTGCTCACTGAGATCTCCTTTTTGGGGCAGAGAGGCACTCAGGCTGGTTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR GCA 90 bp TCAGGGGGCTCTCTGGAGCCACGCTGCCTACGAAAAATATTTACATaGATTTGCCACGCTGAGGCCAGGGTCACTGTGGTGCCAGGCAGG +
Preference number: 1 (lower is better)
Translates to: SGGSLEPRCLRKIFT*ICHAEARVTVVPGR
Trigger: CCTGCCTGGCACCACAGTGACCCTGGCCTCAGCGTGGCAAATGCATGTAAATATTTTTCGTAGGCAGCGTGGCTCCAGAGAGCCCCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR TCA 90 bp GGAGAGATTCAACAACCCCAGAGAGACCAGGACAAAACAGGCTGGTaGCAAGGGACACCCTCTCACCCAGCTAGAGAGAGGCCCTGGGAT +
Preference number: 1 (lower is better)
Translates to: GEIQQPQRDQDKTGW*QGTPSHPARERPWD
Trigger: ATCCCAGGGCCTCTCTCTAGCTGGGTGAGAGGGTGTCCCTTGTCACCAGCCTGTTTTGTCCTGGTCTCTCTGGGGTTGTTGAATCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR GCA 90 bp CTGTTTCCCTCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTaGATCCACATGGGATTGTGTCTGACACTGGCTGGGGTTGGCGGC +
Preference number: 1 (lower is better)
Translates to: LFPSSIESRSCGVRL*IHMGLCLTLAGVGG
Trigger: GCCGCCAACCCCAGCCAGTGTCAGACACAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGAGGGAAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR GCA 90 bp CACAGAAGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATaGCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGG +
Preference number: 1 (lower is better)
Translates to: HRSSLSFGTPCASSK*QSPSEHSITGRGRG
Trigger: CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCTTCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR GCA 90 bp CAGGAGGGAGGGACACTGTCTTCAGGGGGCTCTCTGGAGCCACGCTaGCTACGAAAAATATTTACATGCATTTGCCACGCTGAGGCCAGG +
Preference number: 1 (lower is better)
Translates to: QEGGTLSSGGSLEPR*LRKIFTCICHAEAR
Trigger: CCTGGCCTCAGCGTGGCAAATGCATGTAAATATTTTTCGTAGGCAGCGTGGCTCCAGAGAGCCCCCTGAAGACAGTGTCCCTCCCTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CCA 90 bp CAGATTTGGGCTGGTCAGACTCCTCATCCTCAGGAGGATAAAGCCTaGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGG +
Preference number: 1 (lower is better)
Translates to: QIWAGQTPHPQEDKA*TSALGPGIHEQGPW
Trigger: CCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTTATCCTCCTGAGGATGAGGAGTCTGACCAGCCCAAATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR GCA 90 bp GGGGCCATCGGCTCTCAGATGGCAACTCCCAGGGCCCAGTCTCGATaGCTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCA +
Preference number: 1 (lower is better)
Translates to: GAIGSQMATPRAQSR*LCKSVQFAGFYLQA
Trigger: TGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAGGCATCGAGACTGGGCCCTGGGAGTTGCCATCTGAGAGCCGATGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CCA 90 bp GTCAGACTCCTCATCCTCAGGAGGATAAAGCCTGGACATCTGCCTTaGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTCTTCTCTCAA +
Preference number: 1 (lower is better)
Translates to: VRLLILRRIKPGHLP*VQGSMNKAPGLFSQ
Trigger: TTGAGAGAAGAGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTTATCCTCCTGAGGATGAGGAGTCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CCA 90 bp TTACAGGCAAGAGGCCTGGGGAGGCAAGTCCAGGGTTGTAGTTGTTaGGAGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCC +
Preference number: 1 (lower is better)
Translates to: LQARGLGRQVQGCSC*EKKSREHRRQPLLP
Trigger: GGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCTCCCAACAACTACAACCCTGGACTTGCCTCCCCAGGCCTCTTGCCTGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR GCA 90 bp GAGGCTCTCAAGCCACAGAAGCTCCCTCTCATTTGGAACTCCCTGTaGTTCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGG +
Preference number: 1 (lower is better)
Translates to: EALKPQKLPLIWNSL*FQQMPKPLRTLHHR
Trigger: CCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCTTCTGTGGCTTGAGAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CCA 90 bp CTCTTCTCTCAAATGCTAAGGACACAGAGAAGAGAAGCCAGTGCCTaGAGCCCAAGCCCCAAATCAGAAGCCAACCCCTGGGATGTGAGG +
Preference number: 1 (lower is better)
Translates to: LFSQMLRTQRREASA*SPSPKSEANPWDVR
Trigger: CCTCACATCCCAGGGGTTGGCTTCTGATTTGGGGCTTGGGCTCCAGGCACTGGCTTCTCTTCTCTGTGTCCTTAGCATTTGAGAGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CCA 90 bp GAAAGGACTCACAGGAGGGAGGGACACTGTCTTCAGGGGGCTCTCTaGAGCCACGCTGCCTACGAAAAATATTTACATGCATTTGCCACG +
Preference number: 1 (lower is better)
Translates to: ERTHRREGHCLQGAL*SHAAYEKYLHAFAT
Trigger: CGTGGCAAATGCATGTAAATATTTTTCGTAGGCAGCGTGGCTCCAGAGAGCCCCCTGAAGACAGTGTCCCTCCCTCCTGTGAGTCCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR TCA 90 bp ATTTCAAGGGCTGTGTTTACCAAATGTTTGTCCTGGAAACCAGCCTaGGTGCCTCTCTGCCCCAAAAAGGAGATCTCAGTGAGCACTGTG +
Preference number: 1 (lower is better)
Translates to: ISRAVFTKCLSWKPA*VPLCPKKEISVSTV
Trigger: CACAGTGCTCACTGAGATCTCCTTTTTGGGGCAGAGAGGCACTCAGGCTGGTTTCCAGGACAAACATTTGGTAAACACAGCCCTTGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CCA 90 bp GTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTaGGGAGGCAAGTCCAGGGTTGTAGTTGTTGGGAGAAGAAATCCA +
Preference number: 1 (lower is better)
Translates to: VNLYSLRASIYRQEA*GGKSRVVVVGRRNP
Trigger: TGGATTTCTTCTCCCAACAACTACAACCCTGGACTTGCCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR TCA 90 bp ATGACTAGTGACTTGCATTGCAGTACGTGTCTGGGGGTGTGTAAGTaGTGCATGAGGATAAACATTCTTGGAAGGACGCGTGTGTTCTGT +
Preference number: 1 (lower is better)
Translates to: MTSDLHCSTCLGVCK*CMRINILGRTRVFC
Trigger: ACAGAACACACGCGTCCTTCCAAGAATGTTTATCCTCATGCATCACTTACACACCCCCAGACACGTACTGCAATGCAAGTCACTAGTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR TCA 90 bp AGGATAAACATTCTTGGAAGGACGCGTGTGTTCTGTGATATGTCTTaGTTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATTGCAT +
Preference number: 1 (lower is better)
Translates to: RINILGRTRVFCDMS*LAGRSGLRMVLSLH
Trigger: ATGCAATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACACGCGTCCTTCCAAGAATGTTTATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR TCA 90 bp CGTATGGTTTTGTCATTGCATGCTTTTGTCTTGTGTGTGACTGAGTaGAAATATGGTGATAGTGTGGGCAATGGTGTCTGTGCAGAGTCC +
Preference number: 1 (lower is better)
Translates to: RMVLSLHAFVLCVTE*KYGDSVGNGVCAES
Trigger: GGACTCTGCACAGACACCATTGCCCACACTATCACCATATTTTCACTCAGTCACACACAAGACAAAAGCATGCAATGACAAAACCATACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCCTGGTGGGGCCAGGCTaGGGACTGGACAGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFLVGPG*GLDSRV
Trigger: CACCCTGCTGTCCAGTCCCCAGCCTGGCCCCACCAG...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCGGGCTCTCCAGGTCCTaGCCTGCCTCGTGCTCTGGC +
Preference number: 2 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFGLSRS*PASCSG
Trigger: GCCAGAGCACGAGGCAGGCCAGGACCTGGAGAGCCC...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCGGCAAGGCCCCCATCTaGCCTCCTGGCCTCCTGGAG +
Preference number: 2 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFGKAPI*PPGLLE
Trigger: CTCCAGGAGGCCAGGAGGCCAGATGGGGGCCTTGCC...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR GCA 90 bp CCCTGGAACCTCCCCCTCACTGCCTACACACCGCTACCCCTCATCCTGCAGAAAGCTGGGGTTGGCGGCTaGATGGTTGGTGTGGGCACC +
Preference number: 2 (lower is better)
Translates to: PWNLPLTAYTPLPLILQKAGVGG*MVGVGT
Trigger: GGTGCCCACACCAACCATGCAGCCGCCAACCCCAGC...TTTCTGCAGGATGAGGGGTAGCGGTGTGTAGGCAGTGAGGGGGAGGTTCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCGGGTTGGCGGCTGCATaGTTGGTGTGGGCACCATGG +
Preference number: 2 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFGLAAA*LVWAPW
Trigger: CCATGGTGCCCACACCAACCATGCAGCCGCCAACCC...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATGGCTGCTTCCAGCCATaGCCCCTGAAGCTGCAGCCA +
Preference number: 2 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDGCFQP*PLKLQP
Trigger: TGGCTGCAGCTTCAGGGGCCATGGCTGGAAGCAGCC...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTGGGTCCAGCATCTTCTaGGGCTGGGGGCCCAAGCCC +
Preference number: 2 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPGSSIF*GWGPKP
Trigger: GGGCTTGGGCCCCCAGCCCCAGAAGATGCTGGACCC...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTTCTGGGCAGGTGGGCTaGGGTTGGCCTGCCAGGCAG +
Preference number: 2 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPSGQVG*GWPARQ
Trigger: CTGCCTGGCAGGCCAACCTCAGCCCACCTGCCCAGA...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR GCA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGTCTCTTGGACTGCCTTaGCCCGGTCAGGCCGGCCAG +
Preference number: 2 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGSLGLP*PGQAGQ
Trigger: CTGGCCGGCCTGACCGGGGCAAGGCAGTCCAAGAGA...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCTCAGAAGCCAACCCCTaGGATGTGAGGAGCCAGGCC +
Preference number: 2 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFSEANP*DVRSQA
Trigger: GGCCTGGCTCCTCACATCCCAGGGGTTGGCTTCTGA...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CAA 90 bp CCATCACAGGCAGGGGTAGGGGGACATGAGGGCCCTGCACCCACATaGCACCTGGGAGAGCCTAGCTGGTCCTCACTGAACTCTCTTGGA +
Preference number: 2 (lower is better)
Translates to: PSQAGVGGHEGPAPT*HLGEPSWSSLNSLG
Trigger: TCCAAGAGAGTTCAGTGAGGACCAGCTAGGCTCTCCCAGGTGCAATGTGGGTGCAGGGCCCTCATGTCCCCCTACCCCTGCCTGTGATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATACATGGGATTGTGTCTaGCACTGGCTGGGGTTGGCG +
Preference number: 2 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDTWDCV*HWLGLA
Trigger: CGCCAACCCCAGCCAGTGTCAGACACAATCCCATGT...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR GCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTGCTGGGGTTGGCGGCTaGATGGTTGGTGTGGGCACC +
Preference number: 2 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPAGVGG*MVGVGT
Trigger: GGTGCCCACACCAACCATGCAGCCGCCAACCCCAGC...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR GCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTCCAAACCTCCCCCTCTaGCAGCTGCGGTGGGGAGGA +
Preference number: 2 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPPNLPL*QLRWGG
Trigger: TCCTCCCCACCGCAGCTGGCAGAGGGGGAGGTTTGG...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTCGTAAGGGCACAGTCTaGGGCAGATGGCAGCAGCCC +
Preference number: 2 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPRKGTV*GRWQQP
Trigger: GGGCTGCTGCCATCTGCCCCAGACTGTGCCCTTACG...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATGCTGCATGGTTGGTGTaGGCACCATGGCATGGGACT +
Preference number: 2 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDAAWLV*APWHGT
Trigger: AGTCCCATGCCATGGTGCCCACACCAACCATGCAGC...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGGGGTTGGCGGCTGCATaGTTGGTGTGGGCACCATGG +
Preference number: 2 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGGLAAA*LVWAPW
Trigger: CCATGGTGCCCACACCAACCATGCAGCCGCCAACCC...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
61% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGGGGCTCTCCAGGTCCTaGCCTGCCTCGTGCTCTGGC +
Preference number: 2 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRGLSRS*PASCSG
Trigger: GCCAGAGCACGAGGCAGGCCAGGACCTGGAGAGCCC...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATTTCCTCCCATCCATCTaGCATGAGGTCCTGAAGCCC +
Preference number: 2 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDFLPSI*HEVLKP
Trigger: GGGCTTCAGGACCTCATGTCAGATGGATGGGAGGAA...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCGCAGGTCATGTGGAGTaGGACTGTGCATCCACATGG +
Preference number: 2 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFAGHVE*DCASTW
Trigger: CCATGTGGATGCACAGTCTCACTCCACATGACCTGC...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCTGGCTCCAGCCCTACTaGGAAACTGCACCCACTGTT +
Preference number: 2 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFWLQPY*ETAPTV
Trigger: AACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCA...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR GCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATGGAAACCAGCCTGAGTaGCTCTCTGCCCCAAAAAGG +
Preference number: 2 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDGNQPE*LSAPKR
Trigger: CCTTTTTGGGGCAGAGAGGCACTCAGGCTGGTTTCC...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR GCA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGGGGTGGGGGTGTGAGTaGCAGCCAATCGCAACTCAC +
Preference number: 2 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGGWGCE*QPIATH
Trigger: GTGAGTTGCGATTGGCTGGCACTCACACCCCCACCC...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
60% GC, longest homopolymer 8 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp GTGGCAGGGATGAGGGGAACAAGAGATGAGCTCGTAAGGGCACAGTCTGGGGCAAGGGCAGAGAAGAACTaGGGCCAGGTTCCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: VAGMRGTRDELVRAQSGARAEKN*GQVPGP
Trigger: TGGGCCTGGAACCTGGCCCCAGTTCTTCTCTGCCCT...TGCCCCAGACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTCATCCCTGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTAGGGCAGAGAAGAACTaGGGCCAGGTTCCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPRAEKN*GQVPGP
Trigger: TGGGCCTGGAACCTGGCCCCAGTTCTTCTCTGCCCT...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTGACACTGGCTGGGGTTaGCGGCTGCATGGTTGGTGT +
Preference number: 2 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPDTGWG*RLHGWC
Trigger: ACACCAACCATGCAGCCGCCAACCCCAGCCAGTGTC...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTGTTGGGTCTCCCACCTaGGGTCCAGCATCTTCTGGG +
Preference number: 2 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPVGSPT*GPASSG
Trigger: CCCAGAAGATGCTGGACCCCAGGTGGGAGACCCAAC...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp GACAAGGGACACCCTCTCACCCAGCTAGAGAGAGGCCCTGGGATACGAGCAAGAGACTGGTGGCAGGGATaGGGGGAACAAGAGATGAGC +
Preference number: 2 (lower is better)
Translates to: DKGHPLTQLERGPGIRARDWWQG*GEQEMS
Trigger: GCTCATCTCTTGTTCCCCTCATCCCTGCCACCAGTC...TCTTGCTCGTATCCCAGGGCCTCTCTCTAGCTGGGTGAGAGGGTGTCCCTTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTTCTGACATGAGGTCCTaGAGCCCCAGACTGGTGGCA +
Preference number: 2 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPSDMRS*SPRLVA
Trigger: TGCCACCAGTCTGGGGCTTCAGGACCTCATGTCAGA...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp GACAAGGGACACCCTCTCACCCAGCTAGAGAGAGGCCCTGGGATACGAGCAAGACCCATCCATCTGACATaGGGTCCTGAAGCCCCAGAC +
Preference number: 2 (lower is better)
Translates to: DKGHPLTQLERGPGIRARPIHLT*GPEAPD
Trigger: GTCTGGGGCTTCAGGACCTCATGTCAGATGGATGGG...TCTTGCTCGTATCCCAGGGCCTCTCTCTAGCTGGGTGAGAGGGTGTCCCTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCGTTTCCCTCCAGCATTaGGAGCAGGTCATGTGGAGT +
Preference number: 2 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFVSLQH*EQVMWS
Trigger: ACTCCACATGACCTGCTCTCAATGCTGGAGGGAAAC...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR GCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTAGTGAGCACTGTGGGTaGCAAGTCAGGGCTCAGGCT +
Preference number: 2 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPSEHCG*QVRAQA
Trigger: AGCCTGAGCCCTGACTTGGCACCCACAGTGCTCACT...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR GCA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGCCAGGCCCACCTGCATaGAATGCCCTAAAAGGGCTG +
Preference number: 2 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGPGPPA*NALKGL
Trigger: CAGCCCTTTTAGGGCATTGCATGCAGGTGGGCCTGG...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATTTGGTGTGGGCACCATaGCATGGGACTGAGTATGAC +
Preference number: 2 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDLVWAP*HGTEYD
Trigger: GTCATACTCAGTCCCATGCCATGGTGCCCACACCAA...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCTGGCGGCTGCATGGTTaGTGTGGGCACCATGGCATG +
Preference number: 2 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSWRLHG*CGHHGM
Trigger: CATGCCATGGTGCCCACACCAACCATGCAGCCGCCA...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTCTTGAATCTGGGATGTaGGTGAGGGGTGGGGGTGTG +
Preference number: 2 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPLESGM*VRGGGV
Trigger: CACACCCCCACCCCTCACCCACATCCCAGATTCAAG...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCTGTGAAGGAGGGTTTTaGGACTGGAAGATGGAGCCC +
Preference number: 2 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFCEGGF*DWKMEP
Trigger: GGGCTCCATCTTCCAGTCCCAAAACCCTCCTTCACA...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCAACAGCAGGGTGGTGTTaGGGCTGCAGGGAGGCACTG +
Preference number: 2 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSTAGWC*GCREAL
Trigger: CAGTGCCTCCCTGCAGCCTCAACACCACCCTGCTGT...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTGAGGGGAACAAGAGATaGGCTCGTAAGGGCACAGTC +
Preference number: 2 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPEGNKR*ARKGTV
Trigger: GACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTC...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCTCTGACATGAGGTCCTaGAGCCCCAGACTGGTGGCA +
Preference number: 2 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSSDMRS*SPRLVA
Trigger: TGCCACCAGTCTGGGGCTTCAGGACCTCATGTCAGA...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCCCCATCCATCTGACATaGGGTCCTGAAGCCCCAGAC +
Preference number: 2 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSPIHLT*GPEAPD
Trigger: GTCTGGGGCTTCAGGACCTCATGTCAGATGGATGGG...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGTCATCCCTCAAACCCTaGCCTCGGGGCCTGAGGGAT +
Preference number: 2 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRSSLKP*PRGLRD
Trigger: ATCCCTCAGGCCCCGAGGTCAGGGTTTGAGGGATGA...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGCTTCTGCTCCAAAGATaGCTGAGGCCAACCCGCCCC +
Preference number: 2 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRLLLQR*LRPTRP
Trigger: GGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAG...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGCCCCACCAGGAGGCCTaGCAGGCGGCTTTGCCAACC +
Preference number: 2 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRPHQEA*QAALPT
Trigger: GGTTGGCAAAGCCGCCTGTCAGGCCTCCTGGTGGGG...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTGCTAGAGAGAGGCCCTaGGATACGAGCAAGAGGTTG +
Preference number: 2 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPARERP*DTSKRL
Trigger: CAACCTCTTGCTCGTATCCCAGGGCCTCTCTCTAGC...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGTGGAGACTTGTGTCCTaGGAGGCAGAGTCAGCCCCC +
Preference number: 2 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRWRLVS*EAESAP
Trigger: GGGGGCTGACTCTGCCTCCCAGGACACAAGTCTCCA...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGAGATGGAGCCCAGCCTaGAAAAGACAGGCTGTGGGA +
Preference number: 2 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGRWSPA*KRQAVG
Trigger: TCCCACAGCCTGTCTTTTCCAGGCTGGGCTCCATCT...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTCTCCTCTATCCTCCCTaGTTTCTCAGCCTCGGCCTG +
Preference number: 2 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPLLYPP*FLSLGL
Trigger: CAGGCCGAGGCTGAGAAACCAGGGAGGATAGAGGAG...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGCTCACTGAACTCTCTTaGACTGCCTTGCCCCGGTCA +
Preference number: 2 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGLTELS*TALPRS
Trigger: TGACCGGGGCAAGGCAGTCCAAGAGAGTTCAGTGAG...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CAA 90 bp GGTCAGACTCCTCATCCTCAGGAGGATAAAGCCTGGACATCTGCCTaGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTCTTCTCTCA +
Preference number: 2 (lower is better)
Translates to: GQTPHPQEDKAWTSA*GPGIHEQGPWPLLS
Trigger: TGAGAGAAGAGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTTATCCTCCTGAGGATGAGGAGTCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGACAGCAGGGTGGTGTTaGGGCTGCAGGGAGGCACTG +
Preference number: 2 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLTAGWC*GCREAL
Trigger: CAGTGCCTCCCTGCAGCCTCAACACCACCCTGCTGT...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGTCCTGGAAACCAGCCTaGGTGCCTCTCTGCCCCAAA +
Preference number: 2 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRSWKPA*VPLCPK
Trigger: TTTGGGGCAGAGAGGCACTCAGGCTGGTTTCCAGGA...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR GCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCTGTGGAGTGAGACTGTaGATCCACATGGGATTGTGT +
Preference number: 2 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFCGVRL*IHMGLC
Trigger: ACACAATCCCATGTGGATGCACAGTCTCACTCCACA...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR GCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATTGTGGAGTGAGACTGTaGATCCACATGGGATTGTGT +
Preference number: 2 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDCGVRL*IHMGLC
Trigger: ACACAATCCCATGTGGATGCACAGTCTCACTCCACA...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR GCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGCCAAACCTCCCCCTCTaGCAGCTGCGGTGGGGAGGA +
Preference number: 2 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRPNLPL*QLRWGG
Trigger: TCCTCCCCACCGCAGCTGGCAGAGGGGGAGGTTTGG...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR GCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTGTCTCACCAGAGCTGTaGTCTCCAAGACAGCAGCAC +
Preference number: 2 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPVSPEL*SPRQQH
Trigger: GTGCTGCTGTCTTGGAGAGCACAGCTCTGGTGAGAC...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR GCA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCAGCCCTGCACCCACATTaGACCTGGGAGAGCCTAGCT +
Preference number: 2 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSALHPH*TWESLA
Trigger: AGCTAGGCTCTCCCAGGTGCAATGTGGGTGCAGGGC...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp GTGTGTTCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTCTGGTGGGGCCAGGCTaGGGACTGGACAGCAGGGTG +
Preference number: 2 (lower is better)
Translates to: VCSVICLDWLGGQDCVWFLVGPG*GLDSRV
Trigger: CACCCTGCTGTCCAGTCCCCAGCCTGGCCCCACCAG...AAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGTCCCCCACTATCACCTaGTCTCATCCCTCAAACCCT +
Preference number: 2 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGSPTIT*SHPSNP
Trigger: AGGGTTTGAGGGATGAGACCAGGTGATAGTGGGGGA...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCACACACCACATCCCTTTaGCTCCAAGAGGCCCCCTGC +
Preference number: 2 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSHTTSL*LQEAPC
Trigger: GCAGGGGGCCTCTTGGAGCCAAAGGGATGTGGTGTG...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTTGTGAAGGAGGGTTTTaGGACTGGAAGATGGAGCCC +
Preference number: 2 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPCEGGF*DWKMEP
Trigger: GGGCTCCATCTTCCAGTCCCAAAACCCTCCTTCACA...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGGGCCTCCTGGCCTCCTaGAGACAGGGTCTGGGCTCT +
Preference number: 2 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRGLLAS*RQGLGS
Trigger: AGAGCCCAGACCCTGTCTCCAGGAGGCCAGGAGGCC...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CAA 90 bp ATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATaGTGTCTGACACTGGCTGGGGTTGGCGGCTGCATGGTTGGTGTG +
Preference number: 2 (lower is better)
Translates to: IESRSCGVRLCIHMG*CLTLAGVGGCMVGV
Trigger: CACACCAACCATGCAGCCGCCAACCCCAGCCAGTGTCAGACACAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CAA 90 bp CAACTCCCAGGGCCCAGTCTCGATGCCTCTGTAAATCTGTACAGTTaGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGCAAGTCC +
Preference number: 2 (lower is better)
Translates to: QLPGPSLDASVNLYS*RASIYRQEAWGGKS
Trigger: GGACTTGCCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAGGCATCGAGACTGGGCCCTGGGAGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCGGACCCAATATGGGCTaGTTGTTCTGGCTCGATTCC +
Preference number: 2 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSGPNMG*LFWLDS
Trigger: GGAATCGAGCCAGAACAATCAGCCCATATTGGGTCC...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGTGCTCCAAAGATGACTaGGGCCAACCCGCCCCCTCC +
Preference number: 2 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRCSKDD*GQPAPS
Trigger: GGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCA...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR GCA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCAAGTGAGCACTGTGGGTaGCAAGTCAGGGCTCAGGCT +
Preference number: 2 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSSEHCG*QVRAQA
Trigger: AGCCTGAGCCCTGACTTGGCACCCACAGTGCTCACT...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR GCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCAGACAATGTGTGTGGTaGCAGAGTGTGGGTGTATTT +
Preference number: 2 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFRQCVW*QSVGVF
Trigger: AAATACACCCACACTCTGGCACCACACACATTGTCT...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR GCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGGTCTCACCAGAGCTGTaGTCTCCAAGACAGCAGCAC +
Preference number: 2 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRVSPEL*SPRQQH
Trigger: GTGCTGCTGTCTTGGAGAGCACAGCTCTGGTGAGAC...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGGTGAGGCTGGCAGCCTaGGCAGACCTTGGGAGAGAG +
Preference number: 2 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRVRLAA*ADLGRE
Trigger: CTCTCTCCCAAGGTCTGCCCAGGCTGCCAGCCTCAC...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTTGGAGACAATGTGTGTaGTGCCAGAGTGTGGGTGTA +
Preference number: 2 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPWRQCV*CQSVGV
Trigger: TACACCCACACTCTGGCACCACACACATTGTCTCCA...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCTTGGTGTGGGCACCATaGCATGGGACTGAGTATGAC +
Preference number: 2 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSLVWAP*HGTEYD
Trigger: GTCATACTCAGTCCCATGCCATGGTGCCCACACCAA...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCAGCTGCATGGTTGGTGTaGGCACCATGGCATGGGACT +
Preference number: 2 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSAAWLV*APWHGT
Trigger: AGTCCCATGCCATGGTGCCCACACCAACCATGCAGC...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCGTTGCAGTGTCTAGATaGTTTCAAGGGCTGTGTTTA +
Preference number: 2 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFVAVSR*FQGLCL
Trigger: TAAACACAGCCCTTGAAATCATCTAGACACTGCAAC...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGGGACCCAATATGGGCTaGTTGTTCTGGCTCGATTCC +
Preference number: 2 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRGPNMG*LFWLDS
Trigger: GGAATCGAGCCAGAACAATCAGCCCATATTGGGTCC...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGTCATCCCTCAAACCCTaGCCTCGGGGCCTGAGGGAT +
Preference number: 2 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGSSLKP*PRGLRD
Trigger: ATCCCTCAGGCCCCGAGGTCAGGGTTTGAGGGATGA...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCACCTGCCTTCCTGACTTaGATCTGGGATGTGGGTGAG +
Preference number: 2 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSPAFLT*IWDVGE
Trigger: CTCACCCACATCCCAGATTCAAGTCAGGAAGGCAGG...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp CCCTGGAACCTCCCCCTCACTGCCTACACACCGCTACCCCTCATCCTGCAGAAACAGGAAGCTGTTTCTTaGGGGAAGATGCAGAAAGAA +
Preference number: 2 (lower is better)
Translates to: PWNLPLTAYTPLPLILQKQEAVS*GKMQKE
Trigger: TTCTTTCTGCATCTTCCCCCAAGAAACAGCTTCCTG...TTTCTGCAGGATGAGGGGTAGCGGTGTGTAGGCAGTGAGGGGGAGGTTCCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCGGTCAGGATTGCGTATaGTTTTGTCATTGCATGCTT +
Preference number: 2 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFGQDCV*FCHCML
Trigger: AAGCATGCAATGACAAAACCATACGCAATCCTGACC...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTAGTAAGCCTGAAAGCTaGAGACAATGTGTGTGGTGC +
Preference number: 2 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPSKPES*RQCVWC
Trigger: GCACCACACACATTGTCTCCAGCTTTCAGGCTTACT...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGGTTGGGTCTCCCACCTaGGGTCCAGCATCTTCTGGG +
Preference number: 2 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRVGSPT*GPASSG
Trigger: CCCAGAAGATGCTGGACCCCAGGTGGGAGACCCAAC...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGACATGGGATTGTGTCTaGCACTGGCTGGGGTTGGCG +
Preference number: 2 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGTWDCV*HWLGLA
Trigger: CGCCAACCCCAGCCAGTGTCAGACACAATCCCATGT...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGTCCAGCCATGGCCCCTaGAGCTGCAGCCAGAATTGT +
Preference number: 2 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRSSHGP*SCSQNC
Trigger: ACAATTCTGGCTGCAGCTTCAGGGGCCATGGCTGGA...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR GCA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGCCCACCTGCATGCAATaGCCTAAAAGGGCTGTGGCC +
Preference number: 2 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGPTCMQ*PKRAVA
Trigger: GGCCACAGCCCTTTTAGGGCATTGCATGCAGGTGGG...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATCGTAAGGGCACAGTCTaGGGCAGATGGCAGCAGCCC +
Preference number: 2 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHRKGTV*GRWQQP
Trigger: GGGCTGCTGCCATCTGCCCCAGACTGTGCCCTTACG...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTCAGGAAGCTGTTTCTTaGGGGAAGATGCAGAAAGAA +
Preference number: 2 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPQEAVS*GKMQKE
Trigger: TTCTTTCTGCATCTTCCCCCAAGAAACAGCTTCCTG...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGTGGAGACAATGTGTGTaGTGCCAGAGTGTGGGTGTA +
Preference number: 2 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRWRQCV*CQSVGV
Trigger: TACACCCACACTCTGGCACCACACACATTGTCTCCA...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAAGGCTGGGTCCACCTaGCTTCCTCACAAGCCTCTG +
Preference number: 2 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGKAGST*LPHKPL
Trigger: CAGAGGCTTGTGAGGAAGCCAGGTGGACCCAGCCTT...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCACTGGGAGAGCCTAGCTaGTCCTCACTGAACTCTCTT +
Preference number: 2 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSLGEPS*SSLNSL
Trigger: AAGAGAGTTCAGTGAGGACCAGCTAGGCTCTCCCAG...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGAAGCTCCCTCTCATTTaGAACTCCCTGTGCTTCCAG +
Preference number: 2 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRKLPLI*NSLCFQ
Trigger: CTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCTT...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR GCA 90 bp CCCTGGAACCTCCCCCTCACTGCCTACACACCGCTACCCCTCATCCTGCAGAAAGGTTTTGTCATTGCATaGTTTTGTCTTGTGTGTGAC +
Preference number: 2 (lower is better)
Translates to: PWNLPLTAYTPLPLILQKGFVIA*FCLVCD
Trigger: GTCACACACAAGACAAAAGCATGCAATGACAAAACC...TTTCTGCAGGATGAGGGGTAGCGGTGTGTAGGCAGTGAGGGGGAGGTTCCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGATTGCAGTACGTGTCTaGGGGTGTGTAAGTGATGCA +
Preference number: 2 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRIAVRV*GCVSDA
Trigger: TGCATCACTTACACACCCCCAGACACGTACTGCAAT...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGAGTAAGCCTGAAAGCTaGAGACAATGTGTGTGGTGC +
Preference number: 2 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRSKPES*RQCVWC
Trigger: GCACCACACACATTGTCTCCAGCTTTCAGGCTTACT...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGCCCTCACAGGCACTTTaGAGACTTGTGTCCTGGGAG +
Preference number: 2 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGPSQAL*RLVSWE
Trigger: CTCCCAGGACACAAGTCTCCAAAGTGCCTGTGAGGG...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGATGGAGCCCAGCCTaGAAAAGACAGGCTGTGGGA +
Preference number: 2 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGRWSPA*KRQAVG
Trigger: TCCCACAGCCTGTCTTTTCCAGGCTGGGCTCCATCT...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp GTGTGTTCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTGAGGGGAACAAGAGATaGGCTCGTAAGGGCACAGTC +
Preference number: 2 (lower is better)
Translates to: VCSVICLDWLGGQDCVWFEGNKR*ARKGTV
Trigger: GACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTC...AAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR GCA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGACTAGTGACTTGCATTaGAGTACGTGTCTGGGGGTG +
Preference number: 2 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLTSDLH*STCLGV
Trigger: CACCCCCAGACACGTACTGCAATGCAAGTCACTAGT...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGAGGGCAGATTTGGGCTaGTCAGACTCCTCATCCTCA +
Preference number: 2 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRRADLG*SDSSSS
Trigger: TGAGGATGAGGAGTCTGACCAGCCCAAATCTGCCCT...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CAA 90 bp CCCTCTCACCCAGCTAGAGAGAGGCCCTGGGATACGAGCAAGAGGTaGCAGTGTCTAGATGATTTCAAGGGCTGTGTTTACCAAATGTTT +
Preference number: 2 (lower is better)
Translates to: PSHPARERPWDTSKR*QCLDDFKGCVYQMF
Trigger: AAACATTTGGTAAACACAGCCCTTGAAATCATCTAGACACTGCAACCTCTTGCTCGTATCCCAGGGCCTCTCTCTAGCTGGGTGAGAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR GCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGCTGGGCGGTCAGGATTaGGTATGGTTTTGTCATTGC +
Preference number: 2 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRLGGQD*VWFCHC
Trigger: GCAATGACAAAACCATACGCAATCCTGACCGCCCAG...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR GCA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGCCTGCAGAAATCTGCTaGCAGGGCATCTTGAAAAGG +
Preference number: 2 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGPAEIC*QGILKR
Trigger: CCTTTTCAAGATGCCCTGGCAGCAGATTTCTGCAGG...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTGAAAGAAATGAAGTCTaGGTACATGTGTACTTGGCA +
Preference number: 2 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPERNEV*VHVYLA
Trigger: TGCCAAGTACACATGTACCCAGACTTCATTTCTTTC...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGGGTCAGGATTGCGTATaGTTTTGTCATTGCATGCTT +
Preference number: 2 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRGQDCV*FCHCML
Trigger: AAGCATGCAATGACAAAACCATACGCAATCCTGACC...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGGTGATATGTCTTGATTaGCTGGGCGGTCAGGATTGC +
Preference number: 2 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRVICLD*LGGQDC
Trigger: GCAATCCTGACCGCCCAGCCAATCAAGACATATCAC...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGGTGATATGTCTTGATTaGCTGGGCGGTCAGGATTGC +
Preference number: 2 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGVICLD*LGGQDC
Trigger: GCAATCCTGACCGCCCAGCCAATCAAGACATATCAC...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR GCA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGAGACAATGTGTGTGGTaGCAGAGTGTGGGTGTATTT +
Preference number: 2 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLRQCVW*QSVGVF
Trigger: AAATACACCCACACTCTGGCACCACACACATTGTCT...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGGAGGATAAACATTCTTaGAAGGACGCGTGTGTTCTG +
Preference number: 2 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLEDKHS*KDACVL
Trigger: CAGAACACACGCGTCCTTCCAAGAATGTTTATCCTC...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCAAGATGCAGAAAGAAATaGAGTCTGGGTACATGTGTA +
Preference number: 2 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSRCRKK*SLGTCV
Trigger: TACACATGTACCCAGACTTCATTTCTTTCTGCATCT...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CCA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGGAAAGAAATGAAGTCTaGGTACATGTGTACTTGGCA +
Preference number: 2 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLERNEV*VHVYLA
Trigger: TGCCAAGTACACATGTACCCAGACTTCATTTCTTTC...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR TCA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATCTTTTGTCTTGTGTGTaGCTGAGTGAAAATATGGTG +
Preference number: 2 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHLLSCV*LSENMV
Trigger: CACCATATTTTCACTCAGTCACACACAAGACAAAAG...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CCA 72 bp GGCCTCCTGGAGACAGGGTCTGGGCTCTCCAGGTCCTaGCCTGCCTCGTGCTCTGGCAGCCAAGGCCCCAGA +
Preference number: 3 (lower is better)
Translates to: GLLETGSGLSRS*PASCSGSQGPR
Trigger: TCTGGGGCCTTGGCTGCCAGAGCACGAGGCAGGCCAGGACCTGGAGAGCCCAGACCCTGTCTCCAGGAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CCA 72 bp GCAGAGGGTGCGGAGGGCCCGCCCTCACAGGCACTTTaGAGACTTGTGTCCTGGGAGGCAGAGTCAGCCCCC +
Preference number: 3 (lower is better)
Translates to: AEGAEGPPSQAL*RLVSWEAESAP
Trigger: GGGGGCTGACTCTGCCTCCCAGGACACAAGTCTCCAAAGTGCCTGTGAGGGCGGGCCCTCCGCACCCTCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR TCA 72 bp TGCCGGGGCCACCCCCACCATTGGCTCCAGCCCTACTaGGAAACTGCACCCACTGTTGGGTCTCCCACCTGG +
Preference number: 3 (lower is better)
Translates to: CRGHPHHWLQPY*ETAPTVGSPTW
Trigger: CCAGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGTGGGGGTGGCCCCGGCA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR TCA 72 bp ATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATaGGGCAGAGGGTCTGCTCCCTGTGTCCAGGGGCCC +
Preference number: 3 (lower is better)
Translates to: IQRTQEAATPTP*GRGSAPCVQGP
Trigger: GGGCCCCTGGACACAGGGAGCAGACCCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR GCA 72 bp CCACCCCCACCATTGGCTCCAGCCCTACTGAGAAACTaGACCCACTGTTGGGTCTCCCACCTGGGGTCCAGC +
Preference number: 3 (lower is better)
Translates to: PPPPLAPALLRN*THCWVSHLGSS
Trigger: GCTGGACCCCAGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGTGGGGGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR TCA 72 bp CCACATTGCACCTGGGAGAGCCTAGCTGGTCCTCACTaGACTCTCTTGGACTGCCTTGCCCCGGTCAGGCCG +
Preference number: 3 (lower is better)
Translates to: PHCTWESLAGPH*TLLDCLAPVRP
Trigger: CGGCCTGACCGGGGCAAGGCAGTCCAAGAGAGTTCAGTGAGGACCAGCTAGGCTCTCCCAGGTGCAATGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CCA 72 bp GAGTGCCAGCCAATCGCAACTCACACCACATCCCTTTaGCTCCAAGAGGCCCCCTGCCAAGCACACCCTCCC +
Preference number: 3 (lower is better)
Translates to: ECQPIATHTTSL*LQEAPCQAHPP
Trigger: GGGAGGGTGTGCTTGGCAGGGGGCCTCTTGGAGCCAAAGGGATGTGGTGTGAGTTGCGATTGGCTGGCACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CAA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGCCTGCCCAGCCCTGGTaGCCACCCACATGCCTCCAG +
Preference number: 3 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRPAQPW*PPTCLQ
Trigger: CTGGAGGCATGTGGGTGGCAACCAGGGCTGGGCAGG...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR GCA 72 bp TTCTCCTCTATCCTCCCTGGTTTCTCAGCCTCGGCCTaGCCAGGCCGTCTCACCAGAGCTGTGCTCTCCAAG +
Preference number: 3 (lower is better)
Translates to: FSSILPGFSASA*PGRLTRAVLSK
Trigger: CTTGGAGAGCACAGCTCTGGTGAGACGGCCTGGGCAGGCCGAGGCTGAGAAACCAGGGAGGATAGAGGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CCA 72 bp ACTGCCTTGCCCCGGTCAGGCCGGCCAGGGCAGATTTaGGCTGGTCAGACTCCTCATCCTCAGGAGGATAAA +
Preference number: 3 (lower is better)
Translates to: TALPRSGRPGQI*AGQTPHPQEDK
Trigger: TTTATCCTCCTGAGGATGAGGAGTCTGACCAGCCCAAATCTGCCCTGGCCGGCCTGACCGGGGCAAGGCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CAA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCGCTGGGCGGTCAGGATaGCGTATGGTTTTGTCATTG +
Preference number: 3 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFAGRSG*RMVLSL
Trigger: CAATGACAAAACCATACGCAATCCTGACCGCCCAGC...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CAA 90 bp GAAGCCAGGCCCACCTGCATGCAATGCCCTAAAAGGGCTGTGGCCCCACACTTTTGCATCCACATGGGATaGTGTCTGACACTGGCTGGG +
Preference number: 3 (lower is better)
Translates to: EARPTCMQCPKRAVAPHFCIHMG*CLTLAG
Trigger: CCCAGCCAGTGTCAGACACAATCCCATGTGGATGCA...AAAGTGTGGGGCCACAGCCCTTTTAGGGCATTGCATGCAGGTGGGCCTGGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CAA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTGCCCTCACAGGCACTTaGGAGACTTGTGTCCTGGGA +
Preference number: 3 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPALTGT*ETCVLG
Trigger: TCCCAGGACACAAGTCTCCAAAGTGCCTGTGAGGGC...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR TCA 72 bp CCTGAGTGCCTCTCTGCCCCAAAAAGGAGATCTCAGTaGGCACTGTGGGTGCCAAGTCAGGGCTCAGGCTCA +
Preference number: 3 (lower is better)
Translates to: PECLSAPKRRSQ*ALWVPSQGSGS
Trigger: TGAGCCTGAGCCCTGACTTGGCACCCACAGTGCTCACTGAGATCTCCTTTTTGGGGCAGAGAGGCACTCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CCA 72 bp ACTGTGCATCCACATGGGATTGTGTCTGACACTGGCTaGGGTTGGCGGCTGCATGGTTGGTGTGGGCACCAT +
Preference number: 3 (lower is better)
Translates to: TVHPHGIVSDTG*GWRLHGWCGHH
Trigger: ATGGTGCCCACACCAACCATGCAGCCGCCAACCCCAGCCAGTGTCAGACACAATCCCATGTGGATGCACAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CCA 72 bp CTCATCCTCAGGAGGATAAAGCCTGGACATCTGCCTTaGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTC +
Preference number: 3 (lower is better)
Translates to: LILRRIKPGHLP*VQGSMNKAPGL
Trigger: GAGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTTATCCTCCTGAGGATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CAA 90 bp CCCTGGAACCTCCCCCTCACTGCCTACACACCGCTACCCCTCATCCTGCAGAAATGGGTACATGTGTACTaGGCAGGCAAGAGGAGAGAT +
Preference number: 3 (lower is better)
Translates to: PWNLPLTAYTPLPLILQKWVHVY*AGKRRD
Trigger: ATCTCTCCTCTTGCCTGCCAAGTACACATGTACCCA...TTTCTGCAGGATGAGGGGTAGCGGTGTGTAGGCAGTGAGGGGGAGGTTCCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CAA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTTGCATCCACATGGGATaGTGTCTGACACTGGCTGGG +
Preference number: 3 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPCIHMG*CLTLAG
Trigger: CCCAGCCAGTGTCAGACACAATCCCATGTGGATGCA...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CAA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCAAAACTGCACCCACTGTaGGGTCTCCCACCTGGGGTC +
Preference number: 3 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSKLHPL*GLPPGV
Trigger: GACCCCAGGTGGGAGACCCAACAGTGGGTGCAGTTT...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CAA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGGCCTGGACATCTGCCTaGGGTCCAGGGATCCATGAA +
Preference number: 3 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRAWTSA*GPGIHE
Trigger: TTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGC...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR TCA 72 bp CAACAACCCCAGAGAGACCAGGACAAAACAGGCTGGTaGCAAGGGACACCCTCTCACCCAGCTAGAGAGAGG +
Preference number: 3 (lower is better)
Translates to: QQPQRDQDKTGW*QGTPSHPARER
Trigger: CCTCTCTCTAGCTGGGTGAGAGGGTGTCCCTTGTCACCAGCCTGTTTTGTCCTGGTCTCTCTGGGGTTGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CAA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCAGCCTGGACATCTGCCTaGGGTCCAGGGATCCATGAA +
Preference number: 3 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSAWTSA*GPGIHE
Trigger: TTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGC...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CAA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGCCGGCCAGGGCAGATTaGGGCTGGTCAGACTCCTCA +
Preference number: 3 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGPARAD*GWSDSS
Trigger: TGAGGAGTCTGACCAGCCCAAATCTGCCCTGGCCGG...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR GCA 72 bp TGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTaGCTGTTTCCCTCCAGCATTGAGAGCAGGTCATGT +
Preference number: 3 (lower is better)
Translates to: CGPTLFPRKARA*LFPSSIESRSC
Trigger: ACATGACCTGCTCTCAATGCTGGAGGGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR GCA 72 bp GAGCCACGCTGCCTACGAAAAATATTTACATGCATTTaGCACGCTGAGGCCAGGGTCACTGTGGTGCCAGGC +
Preference number: 3 (lower is better)
Translates to: EPRCLRKIFTCI*HAEARVTVVPG
Trigger: GCCTGGCACCACAGTGACCCTGGCCTCAGCGTGGCAAATGCATGTAAATATTTTTCGTAGGCAGCGTGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CCA 72 bp CAAGGGACACCCTCTCACCCAGCTAGAGAGAGGCCCTaGGATACGAGCAAGAGGTTGCAGTGTCTAGATGAT +
Preference number: 3 (lower is better)
Translates to: QGTPSHPARERP*DTSKRLQCLDD
Trigger: ATCATCTAGACACTGCAACCTCTTGCTCGTATCCCAGGGCCTCTCTCTAGCTGGGTGAGAGGGTGTCCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CCA 72 bp TGGCTCGATTCCACCCTCCCCAGTAAGCCTGAAAGCTaGAGACAATGTGTGTGGTGCCAGAGTGTGGGTGTA +
Preference number: 3 (lower is better)
Translates to: WLDSTLPSKPES*RQCVWCQSVGV
Trigger: TACACCCACACTCTGGCACCACACACATTGTCTCCAGCTTTCAGGCTTACTGGGGAGGGTGGAATCGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CCA 72 bp CAAATGCTAAGGACACAGAGAAGAGAAGCCAGTGCCTaGAGCCCAAGCCCCAAATCAGAAGCCAACCCCTGG +
Preference number: 3 (lower is better)
Translates to: QMLRTQRREASA*SPSPKSEANPW
Trigger: CCAGGGGTTGGCTTCTGATTTGGGGCTTGGGCTCCAGGCACTGGCTTCTCTTCTCTGTGTCCTTAGCATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CCA 72 bp AGAGGCCTGGGGAGGCAAGTCCAGGGTTGTAGTTGTTaGGAGAAGAAATCCAGAGAACACAGGAGGCAGCCA +
Preference number: 3 (lower is better)
Translates to: RGLGRQVQGCSC*EKKSREHRRQP
Trigger: TGGCTGCCTCCTGTGTTCTCTGGATTTCTTCTCCCAACAACTACAACCCTGGACTTGCCTCCCCAGGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CAA 90 bp CCCTGGAACCTCCCCCTCACTGCCTACACACCGCTACCCCTCATCCTGCAGAAAGATACGAGCAAGAGGTaGCAGTGTCTAGATGATTTC +
Preference number: 3 (lower is better)
Translates to: PWNLPLTAYTPLPLILQKDTSKR*QCLDDF
Trigger: GAAATCATCTAGACACTGCAACCTCTTGCTCGTATC...TTTCTGCAGGATGAGGGGTAGCGGTGTGTAGGCAGTGAGGGGGAGGTTCCAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CAA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGTTGGCGGCTGCATGGTaGGTGTGGGCACCATGGCAT +
Preference number: 3 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGLAAAW*VWAPWH
Trigger: ATGCCATGGTGCCCACACCAACCATGCAGCCGCCAA...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CAA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGTCACACCACATCCCTTaGGCTCCAAGAGGCCCCCTG +
Preference number: 3 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGSHHIP*APRGPL
Trigger: CAGGGGGCCTCTTGGAGCCAAAGGGATGTGGTGTGA...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR GCA 72 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTaGATCCACATGGGATTGTGTCTGACACTGGCTGGG +
Preference number: 3 (lower is better)
Translates to: SSIESRSCGVRL*IHMGLCLTLAG
Trigger: CCCAGCCAGTGTCAGACACAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR GCA 72 bp CTCTCAAATGCTAAGGACACAGAGAAGAGAAGCCAGTaGCTGGAGCCCAAGCCCCAAATCAGAAGCCAACCC +
Preference number: 3 (lower is better)
Translates to: LSNAKDTEKRSQ*LEPKPQIRSQP
Trigger: GGGTTGGCTTCTGATTTGGGGCTTGGGCTCCAGGCACTGGCTTCTCTTCTCTGTGTCCTTAGCATTTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR GCA 72 bp TCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATaGCAAAGCCCCTCAGAACACTCCATCACAGGCAGG +
Preference number: 3 (lower is better)
Translates to: SLSFGTPCASSK*QSPSEHSITGR
Trigger: CCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR GCA 72 bp GGCTCTCAGATGGCAACTCCCAGGGCCCAGTCTCGATaGCTCTGTAAATCTGTACAGTTTGCGGGCTTCTAT +
Preference number: 3 (lower is better)
Translates to: GSQMATPRAQSR*LCKSVQFAGFY
Trigger: ATAGAAGCCCGCAAACTGTACAGATTTACAGAGGCATCGAGACTGGGCCCTGGGAGTTGCCATCTGAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CCA 72 bp CTCCCCAGTAAGCCTGAAAGCTGGAGACAATGTGTGTaGTGCCAGAGTGTGGGTGTATTTGGGGTAGGAGGA +
Preference number: 3 (lower is better)
Translates to: LPSKPESWRQCV*CQSVGVFGVGG
Trigger: TCCTCCTACCCCAAATACACCCACACTCTGGCACCACACACATTGTCTCCAGCTTTCAGGCTTACTGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CCA 72 bp GCTGGTCAGACTCCTCATCCTCAGGAGGATAAAGCCTaGACATCTGCCTTGGGTCCAGGGATCCATGAACAA +
Preference number: 3 (lower is better)
Translates to: AGQTPHPQEDKA*TSALGPGIHEQ
Trigger: TTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTTATCCTCCTGAGGATGAGGAGTCTGACCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CCA 72 bp CACAGGAGGGAGGGACACTGTCTTCAGGGGGCTCTCTaGAGCCACGCTGCCTACGAAAAATATTTACATGCA +
Preference number: 3 (lower is better)
Translates to: HRREGHCLQGAL*SHAAYEKYLHA
Trigger: TGCATGTAAATATTTTTCGTAGGCAGCGTGGCTCCAGAGAGCCCCCTGAAGACAGTGTCCCTCCCTCCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CAA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGTGGGTACATGTGTACTaGGCAGGCAAGAGGAGAGAT +
Preference number: 3 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRWVHVY*AGKRRD
Trigger: ATCTCTCCTCTTGCCTGCCAAGTACACATGTACCCA...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CAA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCCGTATGGTTTTGTCATaGCATGCTTTTGTCTTGTGT +
Preference number: 3 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFRMVLS*HAFVLC
Trigger: ACACAAGACAAAAGCATGCAATGACAAAACCATACG...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CAA 90 bp CCCTGGAACCTCCCCCTCACTGCCTACACACCGCTACCCCTCATCCTGCAGAAAGGATTGCGTATGGTTTaGTCATTGCATGCTTTTGTC +
Preference number: 3 (lower is better)
Translates to: PWNLPLTAYTPLPLILQKGLRMV*SLHAFV
Trigger: GACAAAAGCATGCAATGACAAAACCATACGCAATCC...TTTCTGCAGGATGAGGGGTAGCGGTGTGTAGGCAGTGAGGGGGAGGTTCCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR GCA 72 bp AAGCCACAGAAGCTCCCTCTCATTTGGAACTCCCTGTaGTTCCAGCAAATGCCAAAGCCCCTCAGAACACTC +
Preference number: 3 (lower is better)
Translates to: KPQKLPLIWNSL*FQQMPKPLRTL
Trigger: GAGTGTTCTGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCTTCTGTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR GCA 72 bp TCTCTGGAGCCACGCTGCCTACGAAAAATATTTACATaGATTTGCCACGCTGAGGCCAGGGTCACTGTGGTG +
Preference number: 3 (lower is better)
Translates to: SLEPRCLRKIFT*ICHAEARVTVV
Trigger: CACCACAGTGACCCTGGCCTCAGCGTGGCAAATGCATGTAAATATTTTTCGTAGGCAGCGTGGCTCCAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CAA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGGCTGGGCGGTCAGGATaGCGTATGGTTTTGTCATTG +
Preference number: 3 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGAGRSG*RMVLSL
Trigger: CAATGACAAAACCATACGCAATCCTGACCGCCCAGC...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CAA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCAACCATGACTAGTGACTaGCATTGCAGTACGTGTCTG +
Preference number: 3 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSTMTSD*HCSTCL
Trigger: CAGACACGTACTGCAATGCAAGTCACTAGTCATGGT...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR-3UTR CAA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGTGTTTCCCTCCAGCATaGAGAGCAGGTCATGTGGAG +
Preference number: 3 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRCFPPA*RAGHVE
Trigger: CTCCACATGACCTGCTCTCAATGCTGGAGGGAAACA...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR TCA 72 bp GCTGTGTTTACCAAATGTTTGTCCTGGAAACCAGCCTaGGTGCCTCTCTGCCCCAAAAAGGAGATCTCAGTG +
Preference number: 3 (lower is better)
Translates to: AVFTKCLSWKPA*VPLCPKKEISV
Trigger: CACTGAGATCTCCTTTTTGGGGCAGAGAGGCACTCAGGCTGGTTTCCAGGACAAACATTTGGTAAACACAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR TCA 72 bp GAGGATAAACATTCTTGGAAGGACGCGTGTGTTCTGTaGTATGTCTTGATTGGCTGGGCGGTCAGGATTGCG +
Preference number: 3 (lower is better)
Translates to: EDKHSWKDACVL*YVLIGWAVRIA
Trigger: CGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACACGCGTCCTTCCAAGAATGTTTATCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR TCA 72 bp GACTTGCATTGCAGTACGTGTCTGGGGGTGTGTAAGTaGTGCATGAGGATAAACATTCTTGGAAGGACGCGT +
Preference number: 3 (lower is better)
Translates to: DLHCSTCLGVCK*CMRINILGRTR
Trigger: ACGCGTCCTTCCAAGAATGTTTATCCTCATGCATCACTTACACACCCCCAGACACGTACTGCAATGCAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CCA 72 bp TTGGAAGGACGCGTGTGTTCTGTGATATGTCTTGATTaGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCAT +
Preference number: 3 (lower is better)
Translates to: LEGRVCSVICLD*LGGQDCVWFCH
Trigger: ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACACGCGTCCTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR TCA 72 bp GCCCTGGGATACGAGCAAGAGGTTGCAGTGTCTAGATaGTTTCAAGGGCTGTGTTTACCAAATGTTTGTCCT +
Preference number: 3 (lower is better)
Translates to: ALGYEQEVAVSR*FQGLCLPNVCP
Trigger: AGGACAAACATTTGGTAAACACAGCCCTTGAAATCATCTAGACACTGCAACCTCTTGCTCGTATCCCAGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR GCA 72 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTaGGTATGGTTTTGTCATTGCATGCTTTTGTCTTGT +
Preference number: 3 (lower is better)
Translates to: SVICLDWLGGQD*VWFCHCMLLSC
Trigger: ACAAGACAAAAGCATGCAATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATGTGCTGCAGGGGTGCTaGGGGTGGCGGTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDVLQGC*GWRWPL
Trigger: CAGTGGCCACCGCCACCCCCAGCACCCCTGCAGCAC...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGCCAAGACAGCCGCCGTaGTGGGCGGGGAGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGPRQPP*WAGRAP
Trigger: AGGCGCCCTCCCCGCCCACCACGGCGGCTGTCTTGG...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCGGGTCCAGCATCTTCTaGGGCTGGGGGCCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFGSSIF*GWGPKP
Trigger: GGGCTTGGGCCCCCAGCCCCAGAAGATGCTGGACCC...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATGGGTCCAGCATCTTCTaGGGCTGGGGGCCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDGSSIF*GWGPKP
Trigger: GGGCTTGGGCCCCCAGCCCCAGAAGATGCTGGACCC...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CAA 72 bp TGTGAGGAGCCAGGCCTGCCGGGGCCACCCCCACCATaGGCTCCAGCCCTACTGAGAAACTGCACCCACTGT +
Preference number: 4 (lower is better)
Translates to: CEEPGLPGPPPP*APALLRNCTHC
Trigger: ACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGTGGGGGTGGCCCCGGCAGGCCTGGCTCCTCACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp CCCTGGAACCTCCCCCTCACTGCCTACACACCGCTACCCCTCATCCTGCAGAAATCTGGGCAGGTGGGCTaGGGTTGGCCTGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PWNLPLTAYTPLPLILQKSGQVG*GWPARQ
Trigger: CTGCCTGGCAGGCCAACCTCAGCCCACCTGCCCAGA...TTTCTGCAGGATGAGGGGTAGCGGTGTGTAGGCAGTGAGGGGGAGGTTCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTCCAACCCCTGGGATGTaGGGAGCCAGGCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPPTPGM*GARPAG
Trigger: CCCGGCAGGCCTGGCTCCTCACATCCCAGGGGTTGG...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp CCCTGGAACCTCCCCCTCACTGCCTACACACCGCTACCCCTCATCCTGCAGAAACCCCACCAGGAGGCCTaGCAGGCGGCTTTGCCAACC +
Preference number: 4 (lower is better)
Translates to: PWNLPLTAYTPLPLILQKPHQEA*QAALPT
Trigger: GGTTGGCAAAGCCGCCTGTCAGGCCTCCTGGTGGGG...TTTCTGCAGGATGAGGGGTAGCGGTGTGTAGGCAGTGAGGGGGAGGTTCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTCAGGGGGCTGGTGGCTaGCTCCAGGGTGGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPQGAGG*LQGGAL
Trigger: GAGCGCCCCACCCTGGAGCCAGCCACCAGCCCCCTG...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATCTGTGGCAGGCACTGTaGCCACAGTCGGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDLWQAL*PQSGPL
Trigger: CAGGGGACCCGACTGTGGCCACAGTGCCTGCCACAG...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCCTGTGGCAGGCACTGTaGCCACAGTCGGGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFLWQAL*PQSGPL
Trigger: CAGGGGACCCGACTGTGGCCACAGTGCCTGCCACAG...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTGGGTGGTGGCCGGCCTaGGAAGGGCTCTTGGCCGGG +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPGWWPA*EGLLAG
Trigger: CCCGGCCAAGAGCCCTTCCCAGGCCGGCCACCACCC...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGCAGGCTCCTGGGTGGTaGCCGGCCTGGGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGQAPGW*PAWEGL
Trigger: GAGCCCTTCCCAGGCCGGCCACCACCCAGGAGCCTG...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp CCCTGGAACCTCCCCCTCACTGCCTACACACCGCTACCCCTCATCCTGCAGAAACTGGTGGGGCCAGGCTaGGGACTGGACAGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: PWNLPLTAYTPLPLILQKLVGPG*GLDSRV
Trigger: CACCCTGCTGTCCAGTCCCCAGCCTGGCCCCACCAG...TTTCTGCAGGATGAGGGGTAGCGGTGTGTAGGCAGTGAGGGGGAGGTTCCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATAGCCCTGCCCAGCCCTaGTTGCCACCCACATGCCTC +
Preference number: 4 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDSPAQP*LPPTCL
Trigger: GAGGCATGTGGGTGGCAACCAGGGCTGGGCAGGGCT...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATGGAGAGTACCCGCAGTaGGGCAGGCGCCTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDGEYPQ*GRRLGL
Trigger: GAGACCAAGGCGCCTGCCCCACTGCGGGTACTCTCC...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATGCACCGCAGGTGTGGTaGACACCGCCAGGGCTACAT +
Preference number: 4 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDAPQVW*TPPGLH
Trigger: ATGTAGCCCTGGCGGTGTCCACCACACCTGCGGTGC...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTGTGCTGCAGGGGTGCTaGGGGTGGCGGTGGCCACTG +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPVLQGC*GWRWPL
Trigger: CAGTGGCCACCGCCACCCCCAGCACCCCTGCAGCAC...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATGACCAGCCTGGGTGTTaGGGCCTCGGTGTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDDQPGC*GLGVQD
Trigger: GTCTTGGACACCGAGGCCCCAACACCCAGGCTGGTC...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GACAAGGGACACCCTCTCACCCAGCTAGAGAGAGGCCCTGGGATACGAGCAAGAGGGATGTCAGGCTCCTaGGTGGTGGCCGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: DKGHPLTQLERGPGIRARGMSGS*VVAGLG
Trigger: TCCCAGGCCGGCCACCACCCAGGAGCCTGACATCCC...TCTTGCTCGTATCCCAGGGCCTCTCTCTAGCTGGGTGAGAGGGTGTCCCTTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCCGTAAGGGCACAGTCTaGGGCAGATGGCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFRKGTV*GRWQQP
Trigger: GGGCTGCTGCCATCTGCCCCAGACTGTGCCCTTACG...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GACAAGGGACACCCTCTCACCCAGCTAGAGAGAGGCCCTGGGATACGAGCAAGAGCCTGCCTCGTGCTCTaGCAGCCAAGGCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: DKGHPLTQLERGPGIRARACLVL*QPRPQR
Trigger: CCTCTGGGGCCTTGGCTGCCAGAGCACGAGGCAGGC...TCTTGCTCGTATCCCAGGGCCTCTCTCTAGCTGGGTGAGAGGGTGTCCCTTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GACAAGGGACACCCTCTCACCCAGCTAGAGAGAGGCCCTGGGATACGAGCAAGAGGGCTCTCCAGGTCCTaGCCTGCCTCGTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: DKGHPLTQLERGPGIRARGLSRS*PASCSG
Trigger: GCCAGAGCACGAGGCAGGCCAGGACCTGGAGAGCCC...TCTTGCTCGTATCCCAGGGCCTCTCTCTAGCTGGGTGAGAGGGTGTCCCTTGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GAAGCCAGGCCCACCTGCATGCAATGCCCTAAAAGGGCTGTGGCCCCACACTTTGGCAAGGCCCCCATCTaGCCTCCTGGCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: EARPTCMQCPKRAVAPHFGKAPI*PPGLLE
Trigger: CTCCAGGAGGCCAGGAGGCCAGATGGGGGCCTTGCC...AAAGTGTGGGGCCACAGCCCTTTTAGGGCATTGCATGCAGGTGGGCCTGGCTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp CCCTGGAACCTCCCCCTCACTGCCTACACACCGCTACCCCTCATCCTGCAGAAAGGGGAGCCAGCTCTGTaGCGTGCAGACCCCGTACCA +
Preference number: 4 (lower is better)
Translates to: PWNLPLTAYTPLPLILQKGEPAL*RADPVP
Trigger: TGGTACGGGGTCTGCACGCCACAGAGCTGGCTCCCC...TTTCTGCAGGATGAGGGGTAGCGGTGTGTAGGCAGTGAGGGGGAGGTTCCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CCA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGCAGAGGCGAGGGCTGTaGGGAGCCAGCTCTGTGGCG +
Preference number: 4 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGQRRGL*GASSVA
Trigger: CGCCACAGAGCTGGCTCCCCACAGCCCTCGCCTCTG...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR TCA 90 bp GTGGCAGGGATGAGGGGAACAAGAGATGAGCTCGTAAGGGCACAGTCTGGGGCATGTCCCAGGTGGAGATaGTGCCTTGGCCGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: VAGMRGTRDELVRAQSGACPRWR*CLGRSP
Trigger: GGGGCTGCGGCCAAGGCATCATCTCCACCTGGGACA...TGCCCCAGACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTCATCCCTGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp GTGGCAGGGATGAGGGGAACAAGAGATGAGCTCGTAAGGGCACAGTCTGGGGCAAGGCAGCTGAGCAGCTaGGCTGCCCGAGTCGATGGC +
Preference number: 4 (lower is better)
Translates to: VAGMRGTRDELVRAQSGARQLSS*AARVDG
Trigger: GCCATCGACTCGGGCAGCTCAGCTGCTCAGCTGCCT...TGCCCCAGACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTCATCCCTGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCTCATCCCTCAAACCCTaGCCTCGGGGCCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFSSLKP*PRGLRD
Trigger: ATCCCTCAGGCCCCGAGGTCAGGGTTTGAGGGATGA...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp GAAGCCAGGCCCACCTGCATGCAATGCCCTAAAAGGGCTGTGGCCCCACACTTTCCAAACCTCCCCCTCTaGCAGCTGCGGTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: EARPTCMQCPKRAVAPHFPNLPL*QLRWGG
Trigger: TCCTCCCCACCGCAGCTGGCAGAGGGGGAGGTTTGG...AAAGTGTGGGGCCACAGCCCTTTTAGGGCATTGCATGCAGGTGGGCCTGGCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCGAACCTCCCCCTCACTaGCTACACACCGCTACCCCT +
Preference number: 4 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFEPPPH*LHTATP
Trigger: AGGGGTAGCGGTGTGTAGGCAGTGAGGGGGAGGTTC...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATCGCCAGGGCTACATCTaGGCTGAAGCGCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDRQGYI*AEAHGC
Trigger: ACAGCCATGCGCTTCAGCCCAGATGTAGCCCTGGCG...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTGGGATGTCAGGCTCCTaGGTGGTGGCCGGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPGMSGS*VVAGLG
Trigger: TCCCAGGCCGGCCACCACCCAGGAGCCTGACATCCC...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp CCCTGGAACCTCCCCCTCACTGCCTACACACCGCTACCCCTCATCCTGCAGAAAGTGGAGATGATGCCTTaGCCGCAGCCCCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: PWNLPLTAYTPLPLILQKVEMMP*PQPLPQ
Trigger: CTGTGGGAGGGGCTGCGGCCAAGGCATCATCTCCAC...TTTCTGCAGGATGAGGGGTAGCGGTGTGTAGGCAGTGAGGGGGAGGTTCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATAGGGCAGAGAAGAACTaGGGCCAGGTTCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDRAEKN*GQVPGP
Trigger: TGGGCCTGGAACCTGGCCCCAGTTCTTCTCTGCCCT...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCTGGCGGCTGCATGGTTaGTGTGGGCACCATGGCATG +
Preference number: 4 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFWRLHG*CGHHGM
Trigger: CATGCCATGGTGCCCACACCAACCATGCAGCCGCCA...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCTGGAGACTTGTGTCCTaGGAGGCAGAGTCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFWRLVS*EAESAP
Trigger: GGGGGCTGACTCTGCCTCCCAGGACACAAGTCTCCA...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTGGGCCTCTGGGCAGGTaGGCTGAGGTTGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPGPLGR*AEVGLP
Trigger: TGGCAGGCCAACCTCAGCCCACCTGCCCAGAGGCCC...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCGGGCCTCTGGGCAGGTaGGCTGAGGTTGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSGPLGR*AEVGLP
Trigger: TGGCAGGCCAACCTCAGCCCACCTGCCCAGAGGCCC...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATTCAGAAGCCAACCCCTaGGATGTGAGGAGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDSEANP*DVRSQA
Trigger: GGCCTGGCTCCTCACATCCCAGGGGTTGGCTTCTGA...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTAGCCCTGCCCAGCCCTaGTTGCCACCCACATGCCTC +
Preference number: 4 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPSPAQP*LPPTCL
Trigger: GAGGCATGTGGGTGGCAACCAGGGCTGGGCAGGGCT...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCGAGACCTGGACATTCTaGGCCCTGAGGTCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFETWTF*ALRSSQ
Trigger: CTGGGAGGACCTCAGGGCCCAGAATGTCCAGGTCTC...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CCA 90 bp GACAAGGGACACCCTCTCACCCAGCTAGAGAGAGGCCCTGGGATACGAGCAAGAAGCCCGTGCCCTCACTaGGCCCAGTCTCAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: DKGHPLTQLERGPGIRARSPCPH*AQSQLP
Trigger: AGGCAGCTGAGACTGGGCCCAGTGAGGGCACGGGCT...TCTTGCTCGTATCCCAGGGCCTCTCTCTAGCTGGGTGAGAGGGTGTCCCTTGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR TCA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCAGGCAGCTGAGCAGCTaGGCTGCCCGAGTCGATGGC +
Preference number: 4 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSRQLSS*AARVDG
Trigger: GCCATCGACTCGGGCAGCTCAGCTGCTCAGCTGCCT...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTACAGCAGGGTGGTGTTaGGGCTGCAGGGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPTAGWC*GCREAL
Trigger: CAGTGCCTCCCTGCAGCCTCAACACCACCCTGCTGT...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp GTGGCAGGGATGAGGGGAACAAGAGATGAGCTCGTAAGGGCACAGTCTGGGGCATGCTCCAAAGATGACTaGGGCCAACCCGCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: VAGMRGTRDELVRAQSGACSKDD*GQPAPS
Trigger: GGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCA...TGCCCCAGACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTCATCCCTGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCATGCATTTGCCACGCTaGGGCCAGGGTCACTGTGGT +
Preference number: 4 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFMHLPR*GQGHCG
Trigger: ACCACAGTGACCCTGGCCTCAGCGTGGCAAATGCAT...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp GTGGCAGGGATGAGGGGAACAAGAGATGAGCTCGTAAGGGCACAGTCTGGGGCATCCCCAGGGGCAGGGTaGTCCTCTCAGGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: VAGMRGTRDELVRAQSGASPGAG*SSQGCQ
Trigger: CTGACATCCCTGAGAGGAGCACCCTGCCCCTGGGGA...TGCCCCAGACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTCATCCCTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTTCCCCAGGGGCAGGGTaGTCCTCTCAGGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPSPGAG*SSQGCQ
Trigger: CTGACATCCCTGAGAGGAGCACCCTGCCCCTGGGGA...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCTATGTGACGCTCGCCTaGTTGGGTTCCTCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFYVTLA*LGSSSV
Trigger: CACGCTGGAGGAACCCAAGCAGGCGAGCGTCACATA...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCGCTGGGGTTGGCGGCTaGATGGTTGGTGTGGGCACC +
Preference number: 4 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSAGVGG*MVGVGT
Trigger: GGTGCCCACACCAACCATGCAGCCGCCAACCCCAGC...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATCCCACCTGCATGCAATaGCCTAAAAGGGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDPTCMQ*PKRAVA
Trigger: GGCCACAGCCCTTTTAGGGCATTGCATGCAGGTGGG...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCCCAGGCCCACCTGCATaGAATGCCCTAAAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFPGPPA*NALKGL
Trigger: CAGCCCTTTTAGGGCATTGCATGCAGGTGGGCCTGG...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGTTCTCAGCCTCGGCCTaGCCAGGCCGTCTCACCAGA +
Preference number: 4 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGFSASA*PGRLTR
Trigger: TCTGGTGAGACGGCCTGGGCAGGCCGAGGCTGAGAA...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp GACAAGGGACACCCTCTCACCCAGCTAGAGAGAGGCCCTGGGATACGAGCAAGAACACACCCTAAGCCCTaGCCAGCCCTGGTTGCCACC +
Preference number: 4 (lower is better)
Translates to: DKGHPLTQLERGPGIRARTHPKP*PALVAT
Trigger: GGTGGCAACCAGGGCTGGGCAGGGCTTAGGGTGTGT...TCTTGCTCGTATCCCAGGGCCTCTCTCTAGCTGGGTGAGAGGGTGTCCCTTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATATACAGACTGGTCACTaGCCCCAGGCAGAGGTAGGG +
Preference number: 4 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDIQTGH*PQAEVG
Trigger: CCCTACCTCTGCCTGGGGGCAGTGACCAGTCTGTAT...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CCA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCGCAGCACCGCAGGTGTaGTGGACACCGCCAGGGCTA +
Preference number: 4 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSAAPQV*WTPPGL
Trigger: TAGCCCTGGCGGTGTCCACCACACCTGCGGTGCTGC...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GAAGCCAGGCCCACCTGCATGCAATGCCCTAAAAGGGCTGTGGCCCCACACTTTGCTGGATGTTCGTGGTaGGCAGCACCGCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: EARPTCMQCPKRAVAPHFAGCSW*AAPQVW
Trigger: CCACACCTGCGGTGCTGCCCACCACGAACATCCAGC...AAAGTGTGGGGCCACAGCCCTTTTAGGGCATTGCATGCAGGTGGGCCTGGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTCAGGCTGGATGTTCGTaGTGGGCAGCACCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPQAGCS*WAAPQV
Trigger: CACCTGCGGTGCTGCCCACCACGAACATCCAGCCTG...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GTGGCAGGGATGAGGGGAACAAGAGATGAGCTCGTAAGGGCACAGTCTGGGGCACAGGCTGGATGTTCGTaGTGGGCAGCACCGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VAGMRGTRDELVRAQSGAQAGCS*WAAPQV
Trigger: CACCTGCGGTGCTGCCCACCACGAACATCCAGCCTG...TGCCCCAGACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTCATCCCTGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGACGGTGGTGGCTCTCTaGCTGGGCTCTTCCGGGACT +
Preference number: 4 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGTVVAL*LGSSGT
Trigger: AGTCCCGGAAGAGCCCAGCCAGAGAGCCACCACCGT...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTCCTGGGAAGGGCTCTTaGCCGGGAGGTAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPPGKGS*PGGSCA
Trigger: AGCACAGCTACCTCCCGGCCAAGAGCCCTTCCCAGG...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GACAAGGGACACCCTCTCACCCAGCTAGAGAGAGGCCCTGGGATACGAGCAAGACGTAAGGGCACAGTCTaGGGCAGATGGCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: DKGHPLTQLERGPGIRARRKGTV*GRWQQP
Trigger: GGGCTGCTGCCATCTGCCCCAGACTGTGCCCTTACG...TCTTGCTCGTATCCCAGGGCCTCTCTCTAGCTGGGTGAGAGGGTGTCCCTTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCCTCCTCTATCCTCCCTaGTTTCTCAGCCTCGGCCTG +
Preference number: 4 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFLLYPP*FLSLGL
Trigger: CAGGCCGAGGCTGAGAAACCAGGGAGGATAGAGGAG...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTCCCCATCTGGCCTCCTaGCCTCCTGGAGACAGGGTC +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPPHLAS*PPGDRV
Trigger: GACCCTGTCTCCAGGAGGCCAGGAGGCCAGATGGGG...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCGGAGAGTACCCGCAGTaGGGCAGGCGCCTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSGEYPQ*GRRLGL
Trigger: GAGACCAAGGCGCCTGCCCCACTGCGGGTACTCTCC...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTACAGCAGGGTGGTGTTaGGGCTGCAGGGAGGCACTG +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPTAGWC*GCREAL
Trigger: CAGTGCCTCCCTGCAGCCTCAACACCACCCTGCTGT...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATGCAGGTCATGTGGAGTaGGACTGTGCATCCACATGG +
Preference number: 4 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDAGHVE*DCASTW
Trigger: CCATGTGGATGCACAGTCTCACTCCACATGACCTGC...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCCCTGCCTTCCTGACTTaGATCTGGGATGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFPAFLT*IWDVGE
Trigger: CTCACCCACATCCCAGATTCAAGTCAGGAAGGCAGG...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp GACAAGGGACACCCTCTCACCCAGCTAGAGAGAGGCCCTGGGATACGAGCAAGACTTCTGCTCCAAAGATaGCTGAGGCCAACCCGCCCC +
Preference number: 4 (lower is better)
Translates to: DKGHPLTQLERGPGIRARLLLQR*LRPTRP
Trigger: GGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAG...TCTTGCTCGTATCCCAGGGCCTCTCTCTAGCTGGGTGAGAGGGTGTCCCTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATTGGCTCCAGCCCTACTaGGAAACTGCACCCACTGTT +
Preference number: 4 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDWLQPY*ETAPTV
Trigger: AACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCA...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGCCAACCCCTGGGATGTaGGGAGCCAGGCCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLPTPGM*GARPAG
Trigger: CCCGGCAGGCCTGGCTCCTCACATCCCAGGGGTTGG...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp CCCTGGAACCTCCCCCTCACTGCCTACACACCGCTACCCCTCATCCTGCAGAAAATCCCAGGCACCACTTaGAGCACCTGCCCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: PWNLPLTAYTPLPLILQKIPGTT*STCPVS
Trigger: TGACACAGGGCAGGTGCTTCAAGTGGTGCCTGGGAT...TTTCTGCAGGATGAGGGGTAGCGGTGTGTAGGCAGTGAGGGGGAGGTTCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR GCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGGGGGGTAGTGGCCCGTaGCGTAGCCACTGTGGTCAG +
Preference number: 4 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRGGSGP*RSHCGQ
Trigger: CTGACCACAGTGGCTACGGCACGGGCCACTACCCCC...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGGCTGGGGTTGGCGGCTaGATGGTTGGTGTGGGCACC +
Preference number: 4 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRAGVGG*MVGVGT
Trigger: GGTGCCCACACCAACCATGCAGCCGCCAACCCCAGC...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp CCCTGGAACCTCCCCCTCACTGCCTACACACCGCTACCCCTCATCCTGCAGAAACGCTACCCCTCATCCTaGAGAAATCTGCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PWNLPLTAYTPLPLILQKRYPSS*RNLLPG
Trigger: CCCTGGCAGCAGATTTCTGCAGGATGAGGGGTAGCG...TTTCTGCAGGATGAGGGGTAGCGGTGTGTAGGCAGTGAGGGGGAGGTTCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp GAAGCCAGGCCCACCTGCATGCAATGCCCTAAAAGGGCTGTGGCCCCACACTTTGCCCTGCACCCACATTaGACCTGGGAGAGCCTAGCT +
Preference number: 4 (lower is better)
Translates to: EARPTCMQCPKRAVAPHFALHPH*TWESLA
Trigger: AGCTAGGCTCTCCCAGGTGCAATGTGGGTGCAGGGC...AAAGTGTGGGGCCACAGCCCTTTTAGGGCATTGCATGCAGGTGGGCCTGGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp CCCTGGAACCTCCCCCTCACTGCCTACACACCGCTACCCCTCATCCTGCAGAAATGGTTGCCACCCACATaGCTCCAGCGATCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: PWNLPLTAYTPLPLILQKWLPPT*LQRSRG
Trigger: TCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCA...TTTCTGCAGGATGAGGGGTAGCGGTGTGTAGGCAGTGAGGGGGAGGTTCCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCACACACCCTAAGCCCTaGCCAGCCCTGGTTGCCACC +
Preference number: 4 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSTHPKP*PALVAT
Trigger: GGTGGCAACCAGGGCTGGGCAGGGCTTAGGGTGTGT...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCTCAGATGCCAGCCCGTaGCCTCACTGGGCCCAGTCT +
Preference number: 4 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSSDASP*PHWAQS
Trigger: AGACTGGGCCCAGTGAGGGCACGGGCTGGCATCTGA...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CCA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGCAGGGGGCTGGTGGCTaGCTCCAGGGTGGGGCGCTC +
Preference number: 4 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGQGAGG*LQGGAL
Trigger: GAGCGCCCCACCCTGGAGCCAGCCACCAGCCCCCTG...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGTGGTGGCTCTCTGGCTaGGCTCTTCCGGGACTTCTG +
Preference number: 4 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGWWLSG*ALPGLL
Trigger: CAGAAGTCCCGGAAGAGCCCAGCCAGAGAGCCACCA...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCTCTGAGCCACCTCTGTaGGTCCAGGGGCAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSSEPPL*VQGQWS
Trigger: GGACCACTGCCCCTGGACCCACAGAGGTGGCTCAGA...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCGCTCATCCCGGATTGTaGTCAGGAAGGTCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFAHPGL*SGRSLE
Trigger: CTCCAGAGACCTTCCTGACCACAATCCGGGATGAGC...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTGTGGAGATGATGCCTTaGCCGCAGCCCCTCCCACAG +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPVEMMP*PQPLPQ
Trigger: CTGTGGGAGGGGCTGCGGCCAAGGCATCATCTCCAC...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTGTGAGGCTGGCAGCCTaGGCAGACCTTGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPVRLAA*ADLGRE
Trigger: CTCTCTCCCAAGGTCTGCCCAGGCTGCCAGCCTCAC...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATGCTAGAGAGAGGCCCTaGGATACGAGCAAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDARERP*DTSKRL
Trigger: CAACCTCTTGCTCGTATCCCAGGGCCTCTCTCTAGC...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GTGGCAGGGATGAGGGGAACAAGAGATGAGCTCGTAAGGGCACAGTCTGGGGCATGGAGACTTGTGTCCTaGGAGGCAGAGTCAGCCCCC +
Preference number: 4 (lower is better)
Translates to: VAGMRGTRDELVRAQSGAWRLVS*EAESAP
Trigger: GGGGGCTGACTCTGCCTCCCAGGACACAAGTCTCCA...TGCCCCAGACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTCATCCCTGCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCCCCTCACAGGCACTTTaGAGACTTGTGTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFPSQAL*RLVSWE
Trigger: CTCCCAGGACACAAGTCTCCAAAGTGCCTGTGAGGG...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GAAGCCAGGCCCACCTGCATGCAATGCCCTAAAAGGGCTGTGGCCCCACACTTTCACACCACATCCCTTTaGCTCCAAGAGGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: EARPTCMQCPKRAVAPHFHTTSL*LQEAPC
Trigger: GCAGGGGGCCTCTTGGAGCCAAAGGGATGTGGTGTG...AAAGTGTGGGGCCACAGCCCTTTTAGGGCATTGCATGCAGGTGGGCCTGGCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATAGATGGAGCCCAGCCTaGAAAAGACAGGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDRWSPA*KRQAVG
Trigger: TCCCACAGCCTGTCTTTTCCAGGCTGGGCTCCATCT...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GAAGCCAGGCCCACCTGCATGCAATGCCCTAAAAGGGCTGTGGCCCCACACTTTGTTGGGTCTCCCACCTaGGGTCCAGCATCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: EARPTCMQCPKRAVAPHFVGSPT*GPASSG
Trigger: CCCAGAAGATGCTGGACCCCAGGTGGGAGACCCAAC...AAAGTGTGGGGCCACAGCCCTTTTAGGGCATTGCATGCAGGTGGGCCTGGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCAGGGCTCTCCAGGTCCTaGCCTGCCTCGTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSGLSRS*PASCSG
Trigger: GCCAGAGCACGAGGCAGGCCAGGACCTGGAGAGCCC...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GACAAGGGACACCCTCTCACCCAGCTAGAGAGAGGCCCTGGGATACGAGCAAGACTTCAGGGGGCTCTCTaGAGCCACGCTGCCTACGAA +
Preference number: 4 (lower is better)
Translates to: DKGHPLTQLERGPGIRARLQGAL*SHAAYE
Trigger: TTCGTAGGCAGCGTGGCTCCAGAGAGCCCCCTGAAG...TCTTGCTCGTATCCCAGGGCCTCTCTCTAGCTGGGTGAGAGGGTGTCCCTTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCCAACTGAGGCGCTACTaGCTGCAAAACTTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFQLRRY*LQNLLG
Trigger: CCCCAGCAAGTTTTGCAGCCAGTAGCGCCTCAGTTG...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336798.11
3UTR CAA 72 bp ATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTaGGGTCTCCCACCTGGGGTCCAGCATCTTCTGGGG +
Preference number: 4 (lower is better)
Translates to: IGSSPTEKLHPL*GLPPGVQHLLG
Trigger: CCCCAGAAGATGCTGGACCCCAGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTTCTGGAGTTGGGGTCTaGGCCACCTCTGTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPSGVGV*ATSVGP
Trigger: TGGACCCACAGAGGTGGCTCAGACCCCAACTCCAGA...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTGACTGGTGGCAGGGATaGGGGGAACAAGAGATGAGC +
Preference number: 4 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPDWWQG*GEQEMS
Trigger: GCTCATCTCTTGTTCCCCTCATCCCTGCCACCAGTC...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGTCTGACATGAGGTCCTaGAGCCCCAGACTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGSDMRS*SPRLVA
Trigger: TGCCACCAGTCTGGGGCTTCAGGACCTCATGTCAGA...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGCCCATCCATCTGACATaGGGTCCTGAAGCCCCAGAC +
Preference number: 4 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGPIHLT*GPEAPD
Trigger: GTCTGGGGCTTCAGGACCTCATGTCAGATGGATGGG...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp GAAGCCAGGCCCACCTGCATGCAATGCCCTAAAAGGGCTGTGGCCCCACACTTTTCCTGGAAACCAGCCTaGGTGCCTCTCTGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: EARPTCMQCPKRAVAPHFSWKPA*VPLCPK
Trigger: TTTGGGGCAGAGAGGCACTCAGGCTGGTTTCCAGGA...AAAGTGTGGGGCCACAGCCCTTTTAGGGCATTGCATGCAGGTGGGCCTGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTTCCTGGAAACCAGCCTaGGTGCCTCTCTGCCCCAAA +
Preference number: 4 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPSWKPA*VPLCPK
Trigger: TTTGGGGCAGAGAGGCACTCAGGCTGGTTTCCAGGA...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTCTTCTGCTCCAAAGATaGCTGAGGCCAACCCGCCCC +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPLLLQR*LRPTRP
Trigger: GGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAG...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTCCCACCTGCATGCAATaGCCTAAAAGGGCTGTGGCC +
Preference number: 4 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPPTCMQ*PKRAVA
Trigger: GGCCACAGCCCTTTTAGGGCATTGCATGCAGGTGGG...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp GACAAGGGACACCCTCTCACCCAGCTAGAGAGAGGCCCTGGGATACGAGCAAGACCAGGCCCACCTGCATaGAATGCCCTAAAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: DKGHPLTQLERGPGIRARPGPPA*NALKGL
Trigger: CAGCCCTTTTAGGGCATTGCATGCAGGTGGGCCTGG...TCTTGCTCGTATCCCAGGGCCTCTCTCTAGCTGGGTGAGAGGGTGTCCCTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCACCAAACCTCCCCCTCTaGCAGCTGCGGTGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSPNLPL*QLRWGG
Trigger: TCCTCCCCACCGCAGCTGGCAGAGGGGGAGGTTTGG...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp CCCTGGAACCTCCCCCTCACTGCCTACACACCGCTACCCCTCATCCTGCAGAAAGTCTCACCAGAGCTGTaGTCTCCAAGACAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: PWNLPLTAYTPLPLILQKVSPEL*SPRQQH
Trigger: GTGCTGCTGTCTTGGAGAGCACAGCTCTGGTGAGAC...TTTCTGCAGGATGAGGGGTAGCGGTGTGTAGGCAGTGAGGGGGAGGTTCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCACTCCAGGTCCTGGCCTaGCTCGTGCTCTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSLQVLA*LVLWQP
Trigger: TGGCTGCCAGAGCACGAGGCAGGCCAGGACCTGGAG...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTTGGTTGCCACCCACATaGCTCCAGCGATCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPWLPPT*LQRSRG
Trigger: TCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCA...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTGAGTGGGGTTCGCGGTaGCCTTCTCTCCCGAGATTC +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPEWGSR*PSLPRF
Trigger: GAATCTCGGGAGAGAAGGGCACCGCGAACCCCACTC...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR GCA 90 bp GAAGCCAGGCCCACCTGCATGCAATGCCCTAAAAGGGCTGTGGCCCCACACTTTCGAGGGGCACACAGTTaGTACATGGCAGAGTGGGGT +
Preference number: 4 (lower is better)
Translates to: EARPTCMQCPKRAVAPHFRGAHS*YMAEWG
Trigger: ACCCCACTCTGCCATGTAGCAACTGTGTGCCCCTCG...AAAGTGTGGGGCCACAGCCCTTTTAGGGCATTGCATGCAGGTGGGCCTGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR GCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTTCAATGCCCGACTCCTaGTCGAAGTCTGAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPSMPDS*SKSEGV
Trigger: CACCCCCTCAGACTTCGAGCAGGAGTCGGGCATTGA...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CCA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCCGCCAGGGCTACATCTaGGCTGAAGCGCATGGCTGT +
Preference number: 4 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSRQGYI*AEAHGC
Trigger: ACAGCCATGCGCTTCAGCCCAGATGTAGCCCTGGCG...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCTGGTGGCTCTCTGGCTaGGCTCTTCCGGGACTTCTG +
Preference number: 4 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSWWLSG*ALPGLL
Trigger: CAGAAGTCCCGGAAGAGCCCAGCCAGAGAGCCACCA...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGGACCAGCCTGGGTGTTaGGGCCTCGGTGTCCAAGAC +
Preference number: 4 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRDQPGC*GLGVQD
Trigger: GTCTTGGACACCGAGGCCCCAACACCCAGGCTGGTC...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGCAGGCTCCTGGGTGGTaGCCGGCCTGGGAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGQAPGW*PAWEGL
Trigger: GAGCCCTTCCCAGGCCGGCCACCACCCAGGAGCCTG...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGGTGAGGCTGGCAGCCTaGGCAGACCTTGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRVRLAA*ADLGRE
Trigger: CTCTCTCCCAAGGTCTGCCCAGGCTGCCAGCCTCAC...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTGTGTCTGACACTGGCTaGGGTTGGCGGCTGCATGGT +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPVSDTG*GWRLHG
Trigger: ACCATGCAGCCGCCAACCCCAGCCAGTGTCAGACAC...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCGTGTCTGACACTGGCTaGGGTTGGCGGCTGCATGGT +
Preference number: 4 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSVSDTG*GWRLHG
Trigger: ACCATGCAGCCGCCAACCCCAGCCAGTGTCAGACAC...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GTGGCAGGGATGAGGGGAACAAGAGATGAGCTCGTAAGGGCACAGTCTGGGGCAAAGGCTGGGTCCACCTaGCTTCCTCACAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: VAGMRGTRDELVRAQSGAKAGST*LPHKPL
Trigger: CAGAGGCTTGTGAGGAAGCCAGGTGGACCCAGCCTT...TGCCCCAGACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTCATCCCTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCACCCCATCTGGCCTCCTaGCCTCCTGGAGACAGGGTC +
Preference number: 4 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSPHLAS*PPGDRV
Trigger: GACCCTGTCTCCAGGAGGCCAGGAGGCCAGATGGGG...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGTACAGGCAAGAGGCCTaGGGAGGCAAGTCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGYRQEA*GGKSRV
Trigger: AACCCTGGACTTGCCTCCCCAGGCCTCTTGCCTGTA...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTCCATCGGCTCTCAGATaGCAACTCCCAGGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPPSALR*QLPGPS
Trigger: ACTGGGCCCTGGGAGTTGCCATCTGAGAGCCGATGG...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGGCACCTGGGGGATGCTaGGGCCATCGGCTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRAPGGC*GHRLSD
Trigger: ATCTGAGAGCCGATGGCCCCAGCATCCCCCAGGTGC...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATGTTCCTTCACAAGGCTaGAACAGGAGAGTACCCGCA +
Preference number: 4 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDVPSQG*NRRVPA
Trigger: TGCGGGTACTCTCCTGTTCCAGCCTTGTGAAGGAAC...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GACAAGGGACACCCTCTCACCCAGCTAGAGAGAGGCCCTGGGATACGAGCAAGAAGCTCAAGGCAGGGGTaGTACACTAAGGGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: DKGHPLTQLERGPGIRARSSRQG*YTKGFP
Trigger: GGGGAAGCCCTTAGTGTACCACCCCTGCCTTGAGCT...TCTTGCTCGTATCCCAGGGCCTCTCTCTAGCTGGGTGAGAGGGTGTCCCTTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATAGGGGAACACAGGAGTaGCATTCTGGGAAGAGTCAG +
Preference number: 4 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDRGTQE*HSGKSQ
Trigger: CTGACTCTTCCCAGAATGCCACTCCTGTGTTCCCCT...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CCA 90 bp GACAAGGGACACCCTCTCACCCAGCTAGAGAGAGGCCCTGGGATACGAGCAAGACCAAGTCAAAAATTCTaGGGGCCGCCTCTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: DKGHPLTQLERGPGIRARPSQKF*GPPLPG
Trigger: TCCCGGGAGAGGCGGCCCCCAGAATTTTTGACTTGG...TCTTGCTCGTATCCCAGGGCCTCTCTCTAGCTGGGTGAGAGGGTGTCCCTTGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR TCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTCAGGCTTCTGGTATGTaGCGCTCGCCTGCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPQASGM*RSPAWV
Trigger: AACCCAAGCAGGCGAGCGTCACATACCAGAAGCCTG...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGGAGGGGAACAAGAGATaGGCTCGTAAGGGCACAGTC +
Preference number: 4 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGEGNKR*ARKGTV
Trigger: GACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTC...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCGACTGGTGGCAGGGATaGGGGGAACAAGAGATGAGC +
Preference number: 4 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSDWWQG*GEQEMS
Trigger: GCTCATCTCTTGTTCCCCTCATCCCTGCCACCAGTC...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp CCCTGGAACCTCCCCCTCACTGCCTACACACCGCTACCCCTCATCCTGCAGAAAGTTTCCCTCCAGCATTaGGAGCAGGTCATGTGGAGT +
Preference number: 4 (lower is better)
Translates to: PWNLPLTAYTPLPLILQKVSLQH*EQVMWS
Trigger: ACTCCACATGACCTGCTCTCAATGCTGGAGGGAAAC...TTTCTGCAGGATGAGGGGTAGCGGTGTGTAGGCAGTGAGGGGGAGGTTCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTCCTGCCTTCCTGACTTaGATCTGGGATGTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPPAFLT*IWDVGE
Trigger: CTCACCCACATCCCAGATTCAAGTCAGGAAGGCAGG...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp GTGGCAGGGATGAGGGGAACAAGAGATGAGCTCGTAAGGGCACAGTCTGGGGCATGGCTCCAGCCCTACTaGGAAACTGCACCCACTGTT +
Preference number: 4 (lower is better)
Translates to: VAGMRGTRDELVRAQSGAWLQPY*ETAPTV
Trigger: AACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCA...TGCCCCAGACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTCATCCCTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTGCATGGCTGTCTCAATaGCCGACTCCTGCTCGAAGT +
Preference number: 4 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPAWLSQ*PTPARS
Trigger: ACTTCGAGCAGGAGTCGGGCATTGAGACAGCCATGC...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCTATGTGACGCTCGCCTaGTTGGGTTCCTCCAGCGTG +
Preference number: 4 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSYVTLA*LGSSSV
Trigger: CACGCTGGAGGAACCCAAGCAGGCGAGCGTCACATA...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTAGTGAGCACTGTGGGTaGCAAGTCAGGGCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPSEHCG*QVRAQA
Trigger: AGCCTGAGCCCTGACTTGGCACCCACAGTGCTCACT...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCCGCTACCCCTCATCCTaGAGAAATCTGCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSRYPSS*RNLLPG
Trigger: CCCTGGCAGCAGATTTCTGCAGGATGAGGGGTAGCG...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGGAACCTCCCCCTCACTaGCTACACACCGCTACCCCT +
Preference number: 4 (lower is better)
Translates to: RRNPENTGGSHSYPMRQREPPPH*LHTATP
Trigger: AGGGGTAGCGGTGTGTAGGCAGTGAGGGGGAGGTTC...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCGCCCTGTGTCATCACTaGCCTAACCCCACCATTGGC +
Preference number: 4 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSALCHH*PNPTIG
Trigger: GCCAATGGTGGGGTTAGGGCAGTGATGACACAGGGC...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR GCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTAGAGCTCCTCCTCTGTaGCAGACCCCAGCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPRAPPL*QTPASY
Trigger: ATAGGAAGCTGGGGTCTGGCACAGAGGAGGAGCTCT...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CCA 90 bp GTGGCAGGGATGAGGGGAACAAGAGATGAGCTCGTAAGGGCACAGTCTGGGGCAGGGGAGCTCTTCAAATaGTGTGCCCACAGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: VAGMRGTRDELVRAQSGAGELFK*CAHRLD
Trigger: ATCCAGCCTGTGGGCACACCATTTGAAGAGCTCCCC...TGCCCCAGACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTCATCCCTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGTGCTGGGGGTGGCGGTaGCCACTGTGGCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGCWGWR*PLWQAL
Trigger: CAGTGCCTGCCACAGTGGCCACCGCCACCCCCAGCA...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGAGCCACTGTGGTCAGTaGGAGAGGCAGAAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRSHCGQ*ERQKPP
Trigger: CGGAGGCTTCTGCCTCTCCCACTGACCACAGTGGCT...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATCCAAGACAGCCGCCGTaGTGGGCGGGGAGGGCGCCT +
Preference number: 4 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHPRQPP*WAGRAP
Trigger: AGGCGCCCTCCCCGCCCACCACGGCGGCTGTCTTGG...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGGAAGGTCTCTGGAGTTaGGGTCTGAGCCACCTCTGT +
Preference number: 4 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGEGLWS*GLSHLC
Trigger: ACAGAGGTGGCTCAGACCCCAACTCCAGAGACCTTC...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GTGGCAGGGATGAGGGGAACAAGAGATGAGCTCGTAAGGGCACAGTCTGGGGCAGCTCATCCCGGATTGTaGTCAGGAAGGTCTCTGGAG +
Preference number: 4 (lower is better)
Translates to: VAGMRGTRDELVRAQSGAAHPGL*SGRSLE
Trigger: CTCCAGAGACCTTCCTGACCACAATCCGGGATGAGC...TGCCCCAGACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTCATCCCTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGTGCTTGTCAGGCTTCTaGTATGTGACGCTCGCCTGC +
Preference number: 4 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGCLSGF*YVTLAC
Trigger: GCAGGCGAGCGTCACATACCAGAAGCCTGACAAGCA...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTGCTGCATGGTTGGTGTaGGCACCATGGCATGGGACT +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPAAWLV*APWHGT
Trigger: AGTCCCATGCCATGGTGCCCACACCAACCATGCAGC...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTCTTGAATCTGGGATGTaGGTGAGGGGTGGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPLESGM*VRGGGV
Trigger: CACACCCCCACCCCTCACCCACATCCCAGATTCAAG...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp CCCTGGAACCTCCCCCTCACTGCCTACACACCGCTACCCCTCATCCTGCAGAAAAGGGCAGATTTGGGCTaGTCAGACTCCTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: PWNLPLTAYTPLPLILQKRADLG*SDSSSS
Trigger: TGAGGATGAGGAGTCTGACCAGCCCAAATCTGCCCT...TTTCTGCAGGATGAGGGGTAGCGGTGTGTAGGCAGTGAGGGGGAGGTTCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GTGGCAGGGATGAGGGGAACAAGAGATGAGCTCGTAAGGGCACAGTCTGGGGCACTCACTGAACTCTCTTaGACTGCCTTGCCCCGGTCA +
Preference number: 4 (lower is better)
Translates to: VAGMRGTRDELVRAQSGALTELS*TALPRS
Trigger: TGACCGGGGCAAGGCAGTCCAAGAGAGTTCAGTGAG...TGCCCCAGACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTCATCCCTGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCAAGCTCCCTCTCATTTaGAACTCCCTGTGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFKLPLI*NSLCFQ
Trigger: CTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCTT...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp CCCTGGAACCTCCCCCTCACTGCCTACACACCGCTACCCCTCATCCTGCAGAAAGTTCCTTCACAAGGCTaGAACAGGAGAGTACCCGCA +
Preference number: 4 (lower is better)
Translates to: PWNLPLTAYTPLPLILQKVPSQG*NRRVPA
Trigger: TGCGGGTACTCTCCTGTTCCAGCCTTGTGAAGGAAC...TTTCTGCAGGATGAGGGGTAGCGGTGTGTAGGCAGTGAGGGGGAGGTTCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATCTGCCCTTCTTGTTCTaGGGATCCAGAGCAAGAAGA +
Preference number: 4 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDLPFLF*GSRARR
Trigger: TCTTCTTGCTCTGGATCCCCAGAACAAGAAGGGCAG...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CCA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGGGCTGCAAAACTTGCTaGGGCTTGCAGGGGAACACA +
Preference number: 4 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGGCKTC*GLQGNT
Trigger: TGTGTTCCCCTGCAAGCCCCAGCAAGTTTTGCAGCC...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
58% GC, longest homopolymer 7 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CCA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCAGAGAGCTAGGGAGCTaGGTGGTTGTGAGGGGCATG +
Preference number: 4 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSRELGS*VVVRGM
Trigger: CATGCCCCTCACAACCACCCAGCTCCCTAGCTCTCT...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336798.11
3UTR CAA 72 bp TGCTTCCAGCCATGGCCCCTGAAGCTGCAGCCAGAATaGTTTGGCCAAATAGGTGAGGGGGTGTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: CFQPWPLKLQPE*FGQIGEGVSTG
Trigger: CCCTGTGGACACCCCCTCACCTATTTGGCCAAACAATTCTGGCTGCAGCTTCAGGGGCCATGGCTGGAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CAA 72 bp CCTCATCCTCAGGAGGATAAAGCCTGGACATCTGCCTaGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCT +
Preference number: 4 (lower is better)
Translates to: PHPQEDKAWTSA*GPGIHEQGPWP
Trigger: AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTTATCCTCCTGAGGATGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCTTCCTCCCATCCATCTaGCATGAGGTCCTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSFLPSI*HEVLKP
Trigger: GGGCTTCAGGACCTCATGTCAGATGGATGGGAGGAA...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTGGACCCAATATGGGCTaGTTGTTCTGGCTCGATTCC +
Preference number: 4 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPGPNMG*LFWLDS
Trigger: GGAATCGAGCCAGAACAATCAGCCCATATTGGGTCC...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp GTGGCAGGGATGAGGGGAACAAGAGATGAGCTCGTAAGGGCACAGTCTGGGGCAGTTTCCCTCCAGCATTaGGAGCAGGTCATGTGGAGT +
Preference number: 4 (lower is better)
Translates to: VAGMRGTRDELVRAQSGAVSLQH*EQVMWS
Trigger: ACTCCACATGACCTGCTCTCAATGCTGGAGGGAAAC...TGCCCCAGACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTCATCCCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGTGCTCCAAAGATGACTaGGGCCAACCCGCCCCCTCC +
Preference number: 4 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLCSKDD*GQPAPS
Trigger: GGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCA...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGGGGTCCAGGGATCCATaGACAAGGCCCCTGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLGSRDP*TRPLAS
Trigger: AGAGGCCAGGGGCCTTGTTCATGGATCCCTGGACCC...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGCTAGCTGGTCCTCACTaGACTCTCTTGGACTGCCTT +
Preference number: 4 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGLAGPH*TLLDCL
Trigger: AAGGCAGTCCAAGAGAGTTCAGTGAGGACCAGCTAG...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTCTAGCTGGTCCTCACTaGACTCTCTTGGACTGCCTT +
Preference number: 4 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPLAGPH*TLLDCL
Trigger: AAGGCAGTCCAAGAGAGTTCAGTGAGGACCAGCTAG...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCTTTTTGCTACCATTTTaGGAGCTCCTCCTCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFFLLPF*ELLLCA
Trigger: GGCACAGAGGAGGAGCTCTCAAAATGGTAGCAAAAA...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR TCA 90 bp GAAGCCAGGCCCACCTGCATGCAATGCCCTAAAAGGGCTGTGGCCCCACACTTTGCAAAGCCGGGACAGTaGAGGAACTTGGGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: EARPTCMQCPKRAVAPHFAKPGQ*RNLGGN
Trigger: ATTTCCTCCCAAGTTCCTTCACTGTCCCGGCTTTGC...AAAGTGTGGGGCCACAGCCCTTTTAGGGCATTGCATGCAGGTGGGCCTGGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR GCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGTCTCTTGGACTGCCTTaGCCCGGTCAGGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRSLGLP*PGQAGQ
Trigger: CTGGCCGGCCTGACCGGGGCAAGGCAGTCCAAGAGA...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGCTCCAGGTCCTGGCCTaGCTCGTGCTCTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRLQVLA*LVLWQP
Trigger: TGGCTGCCAGAGCACGAGGCAGGCCAGGACCTGGAG...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp CCCTGGAACCTCCCCCTCACTGCCTACACACCGCTACCCCTCATCCTGCAGAAAGGGCCCAGTCTCAGCTaGCTTCTTTTTGCTACCATT +
Preference number: 4 (lower is better)
Translates to: PWNLPLTAYTPLPLILQKGPSLS*LLFATI
Trigger: AATGGTAGCAAAAAGAAGGCAGCTGAGACTGGGCCC...TTTCTGCAGGATGAGGGGTAGCGGTGTGTAGGCAGTGAGGGGGAGGTTCCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CCA 90 bp GTGTGTTCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGCTGGGGGTGGCGGTaGCCACTGTGGCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: VCSVICLDWLGGQDCVWFCWGWR*PLWQAL
Trigger: CAGTGCCTGCCACAGTGGCCACCGCCACCCCCAGCA...AAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATCAGGGGTGCTGGGGGTaGCGGTGGCCACTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHQGCWG*RWPLWQ
Trigger: CTGCCACAGTGGCCACCGCCACCCCCAGCACCCCTG...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TGGGCGGTCAGGATTGCGTATGGTTTTGTCATTGCATGCTTTTGTCTTGTGTGTCAGGGGTGCTGGGGGTaGCGGTGGCCACTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: WAVRIAYGFVIACFCLVCQGCWG*RWPLWQ
Trigger: CTGCCACAGTGGCCACCGCCACCCCCAGCACCCCTG...ACACACAAGACAAAAGCATGCAATGACAAAACCATACGCAATCCTGACCGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCAAGCCACTGTGGTCAGTaGGAGAGGCAGAAGCCTCCG +
Preference number: 4 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSSHCGQ*ERQKPP
Trigger: CGGAGGCTTCTGCCTCTCCCACTGACCACAGTGGCT...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTTGCTTGTCAGGCTTCTaGTATGTGACGCTCGCCTGC +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPCLSGF*YVTLAC
Trigger: GCAGGCGAGCGTCACATACCAGAAGCCTGACAAGCA...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GTGGCAGGGATGAGGGGAACAAGAGATGAGCTCGTAAGGGCACAGTCTGGGGCATTGGTGTGGGCACCATaGCATGGGACTGAGTATGAC +
Preference number: 4 (lower is better)
Translates to: VAGMRGTRDELVRAQSGALVWAP*HGTEYD
Trigger: GTCATACTCAGTCCCATGCCATGGTGCCCACACCAA...TGCCCCAGACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTCATCCCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGGGGTTGGCGGCTGCATaGTTGGTGTGGGCACCATGG +
Preference number: 4 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLGLAAA*LVWAPW
Trigger: CCATGGTGCCCACACCAACCATGCAGCCGCCAACCC...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGCTGTGGGACAGCCCCTaGAACCTCCCCCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGLWDSP*NLPLTA
Trigger: GGCAGTGAGGGGGAGGTTCCAGGGGCTGTCCCACAG...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTCCTGGACATCTGCCTTaGGTCCAGGGATCCATGAAC +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPPGHLP*VQGSMN
Trigger: GTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGG...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGAGGGCAGATTTGGGCTaGTCAGACTCCTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGRADLG*SDSSSS
Trigger: TGAGGATGAGGAGTCTGACCAGCCCAAATCTGCCCT...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTCTCACTGAACTCTCTTaGACTGCCTTGCCCCGGTCA +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPLTELS*TALPRS
Trigger: TGACCGGGGCAAGGCAGTCCAAGAGAGTTCAGTGAG...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGCTGGGAGAGCCTAGCTaGTCCTCACTGAACTCTCTT +
Preference number: 4 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGLGEPS*SSLNSL
Trigger: AAGAGAGTTCAGTGAGGACCAGCTAGGCTCTCCCAG...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GTGTGTTCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTGGCAAGGCCCCCATCTaGCCTCCTGGCCTCCTGGAG +
Preference number: 4 (lower is better)
Translates to: VCSVICLDWLGGQDCVWFGKAPI*PPGLLE
Trigger: CTCCAGGAGGCCAGGAGGCCAGATGGGGGCCTTGCC...AAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CAA 72 bp AGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATaGTGTCTGACACTGGCTGGGGTTGGCGGCTGCATG +
Preference number: 4 (lower is better)
Translates to: RSCGVRLCIHMG*CLTLAGVGGCM
Trigger: CATGCAGCCGCCAACCCCAGCCAGTGTCAGACACAATCCCATGTGGATGCACAGTCTCACTCCACATGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGAAGGTGGTCAGTTGCTaGTGTTCCCCAACTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGKVVSC*CSPTSL
Trigger: GAGAGAAGTTGGGGAACATCAGCAACTGACCACCTT...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR GCA 90 bp GTGTGTTCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTCTCGAAGTTCTCACTaGGCCAGCGCTGGGCCCCCG +
Preference number: 4 (lower is better)
Translates to: VCSVICLDWLGGQDCVWFSRSSH*ASAGPP
Trigger: CGGGGGCCCAGCGCTGGCGCAGTGAGAACTTCGAGA...AAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339394.7
CDS-3UTR GCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTGCTCTTCAAATGGTGTaGCCACAGGCTGGATGTTCG +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPALQMV*PQAGCS
Trigger: CGAACATCCAGCCTGTGGGCACACCATTTGAAGAGC...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCAGCTGAGCAGCTGAGCTaGCCGAGTCGATGGCATTGT +
Preference number: 4 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSAEQLS*PSRWHC
Trigger: ACAATGCCATCGACTCGGGCAGCTCAGCTGCTCAGC...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTCCTCCAGCGTGTAGCTaGCCTCATCCTTTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPPPACS*PHPFSS
Trigger: TGAAGAAAAAGGATGAGGGCAGCTACACGCTGGAGG...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp GAAGCCAGGCCCACCTGCATGCAATGCCCTAAAAGGGCTGTGGCCCCACACTTTCCTGCAGAAATCTGCTaGCAGGGCATCTTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: EARPTCMQCPKRAVAPHFPAEIC*QGILKR
Trigger: CCTTTTCAAGATGCCCTGGCAGCAGATTTCTGCAGG...AAAGTGTGGGGCCACAGCCCTTTTAGGGCATTGCATGCAGGTGGGCCTGGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp GTGTGTTCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTCTCTTGGACTGCCTTaGCCCGGTCAGGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: VCSVICLDWLGGQDCVWFSLGLP*PGQAGQ
Trigger: CTGGCCGGCCTGACCGGGGCAAGGCAGTCCAAGAGA...AAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp GTGGCAGGGATGAGGGGAACAAGAGATGAGCTCGTAAGGGCACAGTCTGGGGCATGTGCTTCCAGCAAATaGCAAAGCCCCTCAGAACAC +
Preference number: 4 (lower is better)
Translates to: VAGMRGTRDELVRAQSGACASSK*QSPSEH
Trigger: GTGTTCTGAGGGGCTTTGGCATTTGCTGGAAGCACA...TGCCCCAGACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTCATCCCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATCAGCTGCCTTCTTTTTaGTACCATTTTGAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDQLPSF*YHFESS
Trigger: GGAGCTCTCAAAATGGTAGCAAAAAGAAGGCAGCTG...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CCA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGGCACCGCAGGTGTGGTaGACACCGCCAGGGCTACAT +
Preference number: 4 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGAPQVW*TPPGLH
Trigger: ATGTAGCCCTGGCGGTGTCCACCACACCTGCGGTGC...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGCCTGGGAAGGGCTCTTaGCCGGGAGGTAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRPGKGS*PGGSCA
Trigger: AGCACAGCTACCTCCCGGCCAAGAGCCCTTCCCAGG...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGTCTGAGCCACCTCTGTaGGTCCAGGGGCAGTGGTCC +
Preference number: 4 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRSEPPL*VQGQWS
Trigger: GGACCACTGCCCCTGGACCCACAGAGGTGGCTCAGA...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGAGCTGCCCGAGTCGATaGCATTGTCCAGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLSCPSR*HCPGGQ
Trigger: CTGGCCTCCTGGACAATGCCATCGACTCGGGCAGCT...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGTGGCGGCTGCATGGTTaGTGTGGGCACCATGGCATG +
Preference number: 4 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLWRLHG*CGHHGM
Trigger: CATGCCATGGTGCCCACACCAACCATGCAGCCGCCA...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTTCCCCCACTATCACCTaGTCTCATCCCTCAAACCCT +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPSPTIT*SHPSNP
Trigger: AGGGTTTGAGGGATGAGACCAGGTGATAGTGGGGGA...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GTGTGTTCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTCTGTGGGACAGCCCCTaGAACCTCCCCCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: VCSVICLDWLGGQDCVWFLWDSP*NLPLTA
Trigger: GGCAGTGAGGGGGAGGTTCCAGGGGCTGTCCCACAG...AAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGAGAGAAGCCAGTGCCTaGAGCCCAAGCCCCAAATCA +
Preference number: 4 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRREASA*SPSPKS
Trigger: TGATTTGGGGCTTGGGCTCCAGGCACTGGCTTCTCT...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTCTGGGAGAGCCTAGCTaGTCCTCACTGAACTCTCTT +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPLGEPS*SSLNSL
Trigger: AAGAGAGTTCAGTGAGGACCAGCTAGGCTCTCCCAG...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATGCCTGCCTCGTGCTCTaGCAGCCAAGGCCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHACLVL*QPRPQR
Trigger: CCTCTGGGGCCTTGGCTGCCAGAGCACGAGGCAGGC...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GTGTGTTCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTGGCCTCCTGGCCTCCTaGAGACAGGGTCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: VCSVICLDWLGGQDCVWFGLLAS*RQGLGS
Trigger: AGAGCCCAGACCCTGTCTCCAGGAGGCCAGGAGGCC...AAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTACAGGAGTGGCATTCTaGGAAGAGTCAGACCCCAAA +
Preference number: 4 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPTGVAF*EESDPK
Trigger: TTTGGGGTCTGACTCTTCCCAGAATGCCACTCCTGT...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR TCA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGTCTGGAGTTGGGGTCTaGGCCACCTCTGTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGSGVGV*ATSVGP
Trigger: TGGACCCACAGAGGTGGCTCAGACCCCAACTCCAGA...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGCAGGCTTCTGGTATGTaGCGCTCGCCTGCTTGGGTT +
Preference number: 4 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLQASGM*RSPAWV
Trigger: AACCCAAGCAGGCGAGCGTCACATACCAGAAGCCTG...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGTGGGCTTCTCAGAGTTaGGGCTGGATACAGACTGGT +
Preference number: 4 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRWASQS*GWIQTG
Trigger: ACCAGTCTGTATCCAGCCTCAACTCTGAGAAGCCCA...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR TCA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGGGACATTCTGGGCCCTaGGGTCCTCCCAGGTCTTGT +
Preference number: 4 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGGHSGP*GPPRSC
Trigger: ACAAGACCTGGGAGGACCTCAGGGCCCAGAATGTCC...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR TCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGCCAGGCAGCAGCAACTaGGGCGCTACTGGCTGCAAA +
Preference number: 4 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRPGSSN*GATGCK
Trigger: TTTGCAGCCAGTAGCGCCTCAGTTGCTGCTGCCTGG...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR GCA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGAGTGAGCACTGTGGGTaGCAAGTCAGGGCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLSEHCG*QVRAQA
Trigger: AGCCTGAGCCCTGACTTGGCACCCACAGTGCTCACT...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGTGTGGAGTGAGACTGTaGATCCACATGGGATTGTGT +
Preference number: 4 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGCGVRL*IHMGLC
Trigger: ACACAATCCCATGTGGATGCACAGTCTCACTCCACA...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGGGGTGGGGGTGTGAGTaGCAGCCAATCGCAACTCAC +
Preference number: 4 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRGWGCE*QPIATH
Trigger: GTGAGTTGCGATTGGCTGGCACTCACACCCCCACCC...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp GTGTGTTCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTTCTCAGCCTCGGCCTaGCCAGGCCGTCTCACCAGA +
Preference number: 4 (lower is better)
Translates to: VCSVICLDWLGGQDCVWFFSASA*PGRLTR
Trigger: TCTGGTGAGACGGCCTGGGCAGGCCGAGGCTGAGAA...AAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCAGCCCTACTGAGAAACTaGACCCACTGTTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSALLRN*THCWVS
Trigger: GGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGC...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTAGGGCCCAGTCTCGATaGCTCTGTAAATCTGTACAG +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPRAQSR*LCKSVQ
Trigger: CTGTACAGATTTACAGAGGCATCGAGACTGGGCCCT...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATTCTCTGGAGCCACGCTaGCTACGAAAAATATTTACA +
Preference number: 4 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDSLEPR*LRKIFT
Trigger: TGTAAATATTTTTCGTAGGCAGCGTGGCTCCAGAGA...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp GAAGCCAGGCCCACCTGCATGCAATGCCCTAAAAGGGCTGTGGCCCCACACTTTAGAGCAAGAAGAACTTaGCTGACCCAGGCAGTGAAT +
Preference number: 4 (lower is better)
Translates to: EARPTCMQCPKRAVAPHFRARRT*LTQAVN
Trigger: ATTCACTGCCTGGGTCAGGCAAGTTCTTCTTGCTCT...AAAGTGTGGGGCCACAGCCCTTTTAGGGCATTGCATGCAGGTGGGCCTGGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR GCA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCCCCAGAAGGATGTTCTaGCCTTCTTGTTCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSPRRMF*PSCSGD
Trigger: ATCCCCAGAACAAGAAGGGCAGAACATCCTTCTGGG...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CCA 90 bp GTGTGTTCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTGGTGTGCCCACAGGCTaGATGTTCGTGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VCSVICLDWLGGQDCVWFGVPTG*MFVVGS
Trigger: GCTGCCCACCACGAACATCCAGCCTGTGGGCACACC...AAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GTGTGTTCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTACGGTGGTGGCTCTCTaGCTGGGCTCTTCCGGGACT +
Preference number: 4 (lower is better)
Translates to: VCSVICLDWLGGQDCVWFTVVAL*LGSSGT
Trigger: AGTCCCGGAAGAGCCCAGCCAGAGAGCCACCACCGT...AAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGGGTCAGGAAGGTCTCTaGAGTTGGGGTCTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLGQEGL*SWGLSH
Trigger: GTGGCTCAGACCCCAACTCCAGAGACCTTCCTGACC...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCAACTCACCGGAACCTCTaGCTCATCCCGGATTGTGGT +
Preference number: 4 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSTHRNL*LIPDCG
Trigger: ACCACAATCCGGGATGAGCCAGAGGTTCCGGTGAGT...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGAGCTGCCCGAGTCGATaGCATTGTCCAGGAGGCCAG +
Preference number: 4 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRSCPSR*HCPGGQ
Trigger: CTGGCCTCCTGGACAATGCCATCGACTCGGGCAGCT...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTATTGCAGTACGTGTCTaGGGGTGTGTAAGTGATGCA +
Preference number: 4 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPIAVRV*GCVSDA
Trigger: TGCATCACTTACACACCCCCAGACACGTACTGCAAT...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GTGGCAGGGATGAGGGGAACAAGAGATGAGCTCGTAAGGGCACAGTCTGGGGCAAGTAAGCCTGAAAGCTaGAGACAATGTGTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: VAGMRGTRDELVRAQSGASKPES*RQCVWC
Trigger: GCACCACACACATTGTCTCCAGCTTTCAGGCTTACT...TGCCCCAGACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTCATCCCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGTTGGTGTGGGCACCATaGCATGGGACTGAGTATGAC +
Preference number: 4 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRLVWAP*HGTEYD
Trigger: GTCATACTCAGTCCCATGCCATGGTGCCCACACCAA...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GTGTGTTCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTGGCTGCTTCCAGCCATaGCCCCTGAAGCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: VCSVICLDWLGGQDCVWFGCFQP*PLKLQP
Trigger: TGGCTGCAGCTTCAGGGGCCATGGCTGGAAGCAGCC...AAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGTGTGAAGGAGGGTTTTaGGACTGGAAGATGGAGCCC +
Preference number: 4 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRCEGGF*DWKMEP
Trigger: GGGCTCCATCTTCCAGTCCCAAAACCCTCCTTCACA...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TGGGCGGTCAGGATTGCGTATGGTTTTGTCATTGCATGCTTTTGTCTTGTGTGTGGCCTCCTGGCCTCCTaGAGACAGGGTCTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: WAVRIAYGFVIACFCLVCGLLAS*RQGLGS
Trigger: AGAGCCCAGACCCTGTCTCCAGGAGGCCAGGAGGCC...ACACACAAGACAAAAGCATGCAATGACAAAACCATACGCAATCCTGACCGCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCAGAGGCTCAAAGGACTTaGCTAAGGAGGGGAGACCAG +
Preference number: 4 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSEAQRT*LRRGDQ
Trigger: CTGGTCTCCCCTCCTTAGCCAAGTCCTTTGAGCCTC...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336798.11
3UTR CAA 72 bp GGGCCCAGTCTCGATGCCTCTGTAAATCTGTACAGTTaGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: GPSLDASVNLYS*RASIYRQEAWG
Trigger: TCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAGGCATCGAGACTGGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGGGGCTACATCTGGGCTaGAGCGCATGGCTGTCTCAA +
Preference number: 4 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRGLHLG*SAWLSQ
Trigger: TTGAGACAGCCATGCGCTTCAGCCCAGATGTAGCCC...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGCCCATCCATCTGACATaGGGTCCTGAAGCCCCAGAC +
Preference number: 4 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRPIHLT*GPEAPD
Trigger: GTCTGGGGCTTCAGGACCTCATGTCAGATGGATGGG...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCCTTTTGTCTTGTGTGTaGCTGAGTGAAAATATGGTG +
Preference number: 4 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFLLSCV*LSENMV
Trigger: CACCATATTTTCACTCAGTCACACACAAGACAAAAG...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGACATGGGATTGTGTCTaGCACTGGCTGGGGTTGGCG +
Preference number: 4 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRTWDCV*HWLGLA
Trigger: CGCCAACCCCAGCCAGTGTCAGACACAATCCCATGT...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp GTGTGTTCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTCATCCCTCAAACCCTaGCCTCGGGGCCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: VCSVICLDWLGGQDCVWFSSLKP*PRGLRD
Trigger: ATCCCTCAGGCCCCGAGGTCAGGGTTTGAGGGATGA...AAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp GTGGCAGGGATGAGGGGAACAAGAGATGAGCTCGTAAGGGCACAGTCTGGGGCATTAAGGTTTTGGCCATaGACTCAGGACAGGTATGGT +
Preference number: 4 (lower is better)
Translates to: VAGMRGTRDELVRAQSGALRFWP*TQDRYG
Trigger: ACCATACCTGTCCTGAGTTCATGGCCAAAACCTTAA...TGCCCCAGACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTCATCCCTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTATTTGGAACTCCCTGTaGTTCCAGCAAATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPIWNSL*FQQMPK
Trigger: CTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAAT...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATGCTGGATGTTCGTGGTaGGCAGCACCGCAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHAGCSW*AAPQVW
Trigger: CCACACCTGCGGTGCTGCCCACCACGAACATCCAGC...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGGTGATATGTCTTGATTaGCTGGGCGGTCAGGATTGC +
Preference number: 4 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRVICLD*LGGQDC
Trigger: GCAATCCTGACCGCCCAGCCAATCAAGACATATCAC...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GTGGCAGGGATGAGGGGAACAAGAGATGAGCTCGTAAGGGCACAGTCTGGGGCAGAGGATAAACATTCTTaGAAGGACGCGTGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: VAGMRGTRDELVRAQSGAEDKHS*KDACVL
Trigger: CAGAACACACGCGTCCTTCCAAGAATGTTTATCCTC...TGCCCCAGACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTCATCCCTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TGGGCGGTCAGGATTGCGTATGGTTTTGTCATTGCATGCTTTTGTCTTGTGTGTGGGTTGGCGGCTGCATaGTTGGTGTGGGCACCATGG +
Preference number: 4 (lower is better)
Translates to: WAVRIAYGFVIACFCLVCGLAAA*LVWAPW
Trigger: CCATGGTGCCCACACCAACCATGCAGCCGCCAACCC...ACACACAAGACAAAAGCATGCAATGACAAAACCATACGCAATCCTGACCGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGCCCTCACAGGCACTTTaGAGACTTGTGTCCTGGGAG +
Preference number: 4 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLPSQAL*RLVSWE
Trigger: CTCCCAGGACACAAGTCTCCAAAGTGCCTGTGAGGG...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATGGCTGCTTCCAGCCATaGCCCCTGAAGCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHGCFQP*PLKLQP
Trigger: TGGCTGCAGCTTCAGGGGCCATGGCTGGAAGCAGCC...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGGGAGGGTTTTGGGACTaGAAGATGGAGCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRGGFWD*KMEPSL
Trigger: CAGGCTGGGCTCCATCTTCCAGTCCCAAAACCCTCC...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TGGGCGGTCAGGATTGCGTATGGTTTTGTCATTGCATGCTTTTGTCTTGTGTGTGCACCTGGGGGATGCTaGGGCCATCGGCTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: WAVRIAYGFVIACFCLVCAPGGC*GHRLSD
Trigger: ATCTGAGAGCCGATGGCCCCAGCATCCCCCAGGTGC...ACACACAAGACAAAAGCATGCAATGACAAAACCATACGCAATCCTGACCGCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GTGTGTTCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTCTTCAGGGGGCTCTCTaGAGCCACGCTGCCTACGAA +
Preference number: 4 (lower is better)
Translates to: VCSVICLDWLGGQDCVWFLQGAL*SHAAYE
Trigger: TTCGTAGGCAGCGTGGCTCCAGAGAGCCCCCTGAAG...AAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GTGTGTTCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTGCAGACGTGGGACCCTaGAGACCTGGACATTCTGGG +
Preference number: 4 (lower is better)
Translates to: VCSVICLDWLGGQDCVWFADVGP*RPGHSG
Trigger: CCCAGAATGTCCAGGTCTCCAGGGTCCCACGTCTGC...AAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR TCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGTTCCTCCCATCCATCTaGCATGAGGTCCTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRFLPSI*HEVLKP
Trigger: GGGCTTCAGGACCTCATGTCAGATGGATGGGAGGAA...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp GACAAGGGACACCCTCTCACCCAGCTAGAGAGAGGCCCTGGGATACGAGCAAGAGTTGCAGTGTCTAGATaGTTTCAAGGGCTGTGTTTA +
Preference number: 4 (lower is better)
Translates to: DKGHPLTQLERGPGIRARVAVSR*FQGLCL
Trigger: TAAACACAGCCCTTGAAATCATCTAGACACTGCAAC...TCTTGCTCGTATCCCAGGGCCTCTCTCTAGCTGGGTGAGAGGGTGTCCCTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGGGACCCAATATGGGCTaGTTGTTCTGGCTCGATTCC +
Preference number: 4 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLGPNMG*LFWLDS
Trigger: GGAATCGAGCCAGAACAATCAGCCCATATTGGGTCC...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGGGAAACCAGCCTGAGTaGCTCTCTGCCCCAAAAAGG +
Preference number: 4 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGGNQPE*LSAPKR
Trigger: CCTTTTTGGGGCAGAGAGGCACTCAGGCTGGTTTCC...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCAACTAGTGACTTGCATTaGAGTACGTGTCTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSTSDLH*STCLGV
Trigger: CACCCCCAGACACGTACTGCAATGCAAGTCACTAGT...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTAGACAATGTGTGTGGTaGCAGAGTGTGGGTGTATTT +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPRQCVW*QSVGVF
Trigger: AAATACACCCACACTCTGGCACCACACACATTGTCT...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp TGGGCGGTCAGGATTGCGTATGGTTTTGTCATTGCATGCTTTTGTCTTGTGTGTGGGTGGGGGTGTGAGTaGCAGCCAATCGCAACTCAC +
Preference number: 4 (lower is better)
Translates to: WAVRIAYGFVIACFCLVCGWGCE*QPIATH
Trigger: GTGAGTTGCGATTGGCTGGCACTCACACCCCCACCC...ACACACAAGACAAAAGCATGCAATGACAAAACCATACGCAATCCTGACCGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGGCCCTACTGAGAAACTaGACCCACTGTTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGALLRN*THCWVS
Trigger: GGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGC...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATGCCCTGCACCCACATTaGACCTGGGAGAGCCTAGCT +
Preference number: 4 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHALHPH*TWESLA
Trigger: AGCTAGGCTCTCCCAGGTGCAATGTGGGTGCAGGGC...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp GAAGCCAGGCCCACCTGCATGCAATGCCCTAAAAGGGCTGTGGCCCCACACTTTCGAAAAATATTTACATaGATTTGCCACGCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: EARPTCMQCPKRAVAPHFRKIFT*ICHAEA
Trigger: GGCCTCAGCGTGGCAAATGCATGTAAATATTTTTCG...AAAGTGTGGGGCCACAGCCCTTTTAGGGCATTGCATGCAGGTGGGCCTGGCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGGAAGGTCTCTGGAGTTaGGGTCTGAGCCACCTCTGT +
Preference number: 4 (lower is better)
Translates to: CKSVQFAGFYLQARGLGREGLWS*GLSHLC
Trigger: ACAGAGGTGGCTCAGACCCCAACTCCAGAGACCTTC...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGACTCACCGGAACCTCTaGCTCATCCCGGATTGTGGT +
Preference number: 4 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGTHRNL*LIPDCG
Trigger: ACCACAATCCGGGATGAGCCAGAGGTTCCGGTGAGT...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GTGGCAGGGATGAGGGGAACAAGAGATGAGCTCGTAAGGGCACAGTCTGGGGCAGGTCAGGATTGCGTATaGTTTTGTCATTGCATGCTT +
Preference number: 4 (lower is better)
Translates to: VAGMRGTRDELVRAQSGAGQDCV*FCHCML
Trigger: AAGCATGCAATGACAAAACCATACGCAATCCTGACC...TGCCCCAGACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTCATCCCTGCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCAGTGATATGTCTTGATTaGCTGGGCGGTCAGGATTGC +
Preference number: 4 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSVICLD*LGGQDC
Trigger: GCAATCCTGACCGCCCAGCCAATCAAGACATATCAC...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TGGGCGGTCAGGATTGCGTATGGTTTTGTCATTGCATGCTTTTGTCTTGTGTGTGACACTGGCTGGGGTTaGCGGCTGCATGGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: WAVRIAYGFVIACFCLVCDTGWG*RLHGWC
Trigger: ACACCAACCATGCAGCCGCCAACCCCAGCCAGTGTC...ACACACAAGACAAAAGCATGCAATGACAAAACCATACGCAATCCTGACCGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGTCCCCCACTATCACCTaGTCTCATCCCTCAAACCCT +
Preference number: 4 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLSPTIT*SHPSNP
Trigger: AGGGTTTGAGGGATGAGACCAGGTGATAGTGGGGGA...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TGGGCGGTCAGGATTGCGTATGGTTTTGTCATTGCATGCTTTTGTCTTGTGTGTCACACCACATCCCTTTaGCTCCAAGAGGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: WAVRIAYGFVIACFCLVCHTTSL*LQEAPC
Trigger: GCAGGGGGCCTCTTGGAGCCAAAGGGATGTGGTGTG...ACACACAAGACAAAAGCATGCAATGACAAAACCATACGCAATCCTGACCGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GTGTGTTCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTAAGGCTGGGTCCACCTaGCTTCCTCACAAGCCTCTG +
Preference number: 4 (lower is better)
Translates to: VCSVICLDWLGGQDCVWFKAGST*LPHKPL
Trigger: CAGAGGCTTGTGAGGAAGCCAGGTGGACCCAGCCTT...AAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATGTTGGGTCTCCCACCTaGGGTCCAGCATCTTCTGGG +
Preference number: 4 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHVGSPT*GPASSG
Trigger: CCCAGAAGATGCTGGACCCCAGGTGGGAGACCCAAC...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCAAAGCTCCCTCTCATTTaGAACTCCCTGTGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSKLPLI*NSLCFQ
Trigger: CTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCTT...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTCAGGGTTGTAGTTGTTaGGAGAAGAAATCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPQGCSC*EKKSRE
Trigger: TTCTCTGGATTTCTTCTCCCAACAACTACAACCCTG...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GTGTGTTCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTACAGGCAAGAGGCCTaGGGAGGCAAGTCCAGGGTT +
Preference number: 4 (lower is better)
Translates to: VCSVICLDWLGGQDCVWFYRQEA*GGKSRV
Trigger: AACCCTGGACTTGCCTCCCCAGGCCTCTTGCCTGTA...AAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TGGGCGGTCAGGATTGCGTATGGTTTTGTCATTGCATGCTTTTGTCTTGTGTGTCCATCGGCTCTCAGATaGCAACTCCCAGGGCCCAGT +
Preference number: 4 (lower is better)
Translates to: WAVRIAYGFVIACFCLVCPSALR*QLPGPS
Trigger: ACTGGGCCCTGGGAGTTGCCATCTGAGAGCCGATGG...ACACACAAGACAAAAGCATGCAATGACAAAACCATACGCAATCCTGACCGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGACAAAGATGCAGACGTaGGACCCTGGAGACCTGGAC +
Preference number: 4 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRTKMQT*DPGDLD
Trigger: GTCCAGGTCTCCAGGGTCCCACGTCTGCATCTTTGT...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR TCA 90 bp TGGGCGGTCAGGATTGCGTATGGTTTTGTCATTGCATGCTTTTGTCTTGTGTGTGGGCTACATCTGGGCTaGAGCGCATGGCTGTCTCAA +
Preference number: 4 (lower is better)
Translates to: WAVRIAYGFVIACFCLVCGLHLG*SAWLSQ
Trigger: TTGAGACAGCCATGCGCTTCAGCCCAGATGTAGCCC...ACACACAAGACAAAAGCATGCAATGACAAAACCATACGCAATCCTGACCGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATTCCAGCCATGGCCCCTaGAGCTGCAGCCAGAATTGT +
Preference number: 4 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHSSHGP*SCSQNC
Trigger: ACAATTCTGGCTGCAGCTTCAGGGGCCATGGCTGGA...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp TGGGCGGTCAGGATTGCGTATGGTTTTGTCATTGCATGCTTTTGTCTTGTGTGTTCCAGCCATGGCCCCTaGAGCTGCAGCCAGAATTGT +
Preference number: 4 (lower is better)
Translates to: WAVRIAYGFVIACFCLVCSSHGP*SCSQNC
Trigger: ACAATTCTGGCTGCAGCTTCAGGGGCCATGGCTGGA...ACACACAAGACAAAAGCATGCAATGACAAAACCATACGCAATCCTGACCGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp TGGGCGGTCAGGATTGCGTATGGTTTTGTCATTGCATGCTTTTGTCTTGTGTGTATGCATTTGCCACGCTaGGGCCAGGGTCACTGTGGT +
Preference number: 4 (lower is better)
Translates to: WAVRIAYGFVIACFCLVCMHLPR*GQGHCG
Trigger: ACCACAGTGACCCTGGCCTCAGCGTGGCAAATGCAT...ACACACAAGACAAAAGCATGCAATGACAAAACCATACGCAATCCTGACCGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp TGGGCGGTCAGGATTGCGTATGGTTTTGTCATTGCATGCTTTTGTCTTGTGTGTCTTGAGCAATCTGGCTaGCGCAAAGCCGGGACAGTG +
Preference number: 4 (lower is better)
Translates to: WAVRIAYGFVIACFCLVCLEQSG*RKAGTV
Trigger: CACTGTCCCGGCTTTGCGTCAGCCAGATTGCTCAAG...ACACACAAGACAAAAGCATGCAATGACAAAACCATACGCAATCCTGACCGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR GCA 90 bp TGGGCGGTCAGGATTGCGTATGGTTTTGTCATTGCATGCTTTTGTCTTGTGTGTGCTGAGCAGCTGAGCTaGCCGAGTCGATGGCATTGT +
Preference number: 4 (lower is better)
Translates to: WAVRIAYGFVIACFCLVCAEQLS*PSRWHC
Trigger: ACAATGCCATCGACTCGGGCAGCTCAGCTGCTCAGC...ACACACAAGACAAAAGCATGCAATGACAAAACCATACGCAATCCTGACCGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp GTGGCAGGGATGAGGGGAACAAGAGATGAGCTCGTAAGGGCACAGTCTGGGGCAGGTTTTGTCATTGCATaGTTTTGTCTTGTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: VAGMRGTRDELVRAQSGAGFVIA*FCLVCD
Trigger: GTCACACACAAGACAAAAGCATGCAATGACAAAACC...TGCCCCAGACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTCATCCCTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGCCTGCAGAAATCTGCTaGCAGGGCATCTTGAAAAGG +
Preference number: 4 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLPAEIC*QGILKR
Trigger: CCTTTTCAAGATGCCCTGGCAGCAGATTTCTGCAGG...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCCGAAAAATATTTACATaGATTTGCCACGCTGAGGCC +
Preference number: 4 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSRKIFT*ICHAEA
Trigger: GGCCTCAGCGTGGCAAATGCATGTAAATATTTTTCG...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATTACCATCTCCTCAGATaGCAGCCCGTGCCCTCACTG +
Preference number: 4 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHYHLLR*QPVPSL
Trigger: CAGTGAGGGCACGGGCTGGCATCTGAGGAGATGGTA...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CCA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATGGTCAGGAAGGTCTCTaGAGTTGGGGTCTGAGCCAC +
Preference number: 4 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHGQEGL*SWGLSH
Trigger: GTGGCTCAGACCCCAACTCCAGAGACCTTCCTGACC...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GTGTGTTCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTGCTAGAGAGAGGCCCTaGGATACGAGCAAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: VCSVICLDWLGGQDCVWFARERP*DTSKRL
Trigger: CAACCTCTTGCTCGTATCCCAGGGCCTCTCTCTAGC...AAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GAAGCCAGGCCCACCTGCATGCAATGCCCTAAAAGGGCTGTGGCCCCACACTTTGAAAGAAATGAAGTCTaGGTACATGTGTACTTGGCA +
Preference number: 4 (lower is better)
Translates to: EARPTCMQCPKRAVAPHFERNEV*VHVYLA
Trigger: TGCCAAGTACACATGTACCCAGACTTCATTTCTTTC...AAAGTGTGGGGCCACAGCCCTTTTAGGGCATTGCATGCAGGTGGGCCTGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGCAGGAAGCTGTTTCTTaGGGGAAGATGCAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRQEAVS*GKMQKE
Trigger: TTCTTTCTGCATCTTCCCCCAAGAAACAGCTTCCTG...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGGAGGATAAACATTCTTaGAAGGACGCGTGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: RRNPENTGGSHSYPMRQREDKHS*KDACVL
Trigger: CAGAACACACGCGTCCTTCCAAGAATGTTTATCCTC...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TGGGCGGTCAGGATTGCGTATGGTTTTGTCATTGCATGCTTTTGTCTTGTGTGTGCTGCATGGTTGGTGTaGGCACCATGGCATGGGACT +
Preference number: 4 (lower is better)
Translates to: WAVRIAYGFVIACFCLVCAAWLV*APWHGT
Trigger: AGTCCCATGCCATGGTGCCCACACCAACCATGCAGC...ACACACAAGACAAAAGCATGCAATGACAAAACCATACGCAATCCTGACCGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TGGGCGGTCAGGATTGCGTATGGTTTTGTCATTGCATGCTTTTGTCTTGTGTGTGGAGGGTTTTGGGACTaGAAGATGGAGCCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: WAVRIAYGFVIACFCLVCGGFWD*KMEPSL
Trigger: CAGGCTGGGCTCCATCTTCCAGTCCCAAAACCCTCC...ACACACAAGACAAAAGCATGCAATGACAAAACCATACGCAATCCTGACCGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GAAGCCAGGCCCACCTGCATGCAATGCCCTAAAAGGGCTGTGGCCCCACACTTTATTTCCTCTTATAAATaGGCACAGCACAGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: EARPTCMQCPKRAVAPHFISSYK*AQHRKC
Trigger: ACACTTCCTGTGCTGTGCCCATTTATAAGAGGAAAT...AAAGTGTGGGGCCACAGCCCTTTTAGGGCATTGCATGCAGGTGGGCCTGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
3UTR CAA 72 bp CCAGCTAGAGAGAGGCCCTGGGATACGAGCAAGAGGTaGCAGTGTCTAGATGATTTCAAGGGCTGTGTTTAC +
Preference number: 4 (lower is better)
Translates to: PARERPWDTSKR*QCLDDFKGCVY
Trigger: GTAAACACAGCCCTTGAAATCATCTAGACACTGCAACCTCTTGCTCGTATCCCAGGGCCTCTCTCTAGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATGAGGGGAACAAGAGATaGGCTCGTAAGGGCACAGTC +
Preference number: 4 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHEGNKR*ARKGTV
Trigger: GACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTC...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATGCAGGTCATGTGGAGTaGGACTGTGCATCCACATGG +
Preference number: 4 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHAGHVE*DCASTW
Trigger: CCATGTGGATGCACAGTCTCACTCCACATGACCTGC...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp TGGGCGGTCAGGATTGCGTATGGTTTTGTCATTGCATGCTTTTGTCTTGTGTGTACAGCTTATTGCACCTaGCGGGACCACCGGAACCAA +
Preference number: 4 (lower is better)
Translates to: WAVRIAYGFVIACFCLVCTAYCT*RDHRNQ
Trigger: TTGGTTCCGGTGGTCCCGTCAGGTGCAATAAGCTGT...ACACACAAGACAAAAGCATGCAATGACAAAACCATACGCAATCCTGACCGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR TCA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGCTCACCATCCACAGGTaGAAATACAGGGATTCAGGG +
Preference number: 4 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGLTIHR*KYRDSG
Trigger: CCCTGAATCCCTGTATTTTCACCTGTGGATGGTGAG...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR TCA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCTTGCGAATAGAGATGTaGCCCAATATAAACGGGTTT +
Preference number: 4 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSLRIEM*PNINGF
Trigger: AAACCCGTTTATATTGGGTCACATCTCTATTCGCAA...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR GCA 90 bp GAAGCCAGGCCCACCTGCATGCAATGCCCTAAAAGGGCTGTGGCCCCACACTTTGTATGGTTTTGTCATTaGATGCTTTTGTCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: EARPTCMQCPKRAVAPHFVWFCH*MLLSCV
Trigger: CACACAAGACAAAAGCATGCAATGACAAAACCATAC...AAAGTGTGGGGCCACAGCCCTTTTAGGGCATTGCATGCAGGTGGGCCTGGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGACTAGTGACTTGCATTaGAGTACGTGTCTGGGGGTG +
Preference number: 4 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGTSDLH*STCLGV
Trigger: CACCCCCAGACACGTACTGCAATGCAAGTCACTAGT...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGGCCCAGTCTCGATaGCTCTGTAAATCTGTACAG +
Preference number: 4 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGRAQSR*LCKSVQ
Trigger: CTGTACAGATTTACAGAGGCATCGAGACTGGGCCCT...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGATATTTACATGCATTTaGCACGCTGAGGCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLIFTCI*HAEARV
Trigger: GACCCTGGCCTCAGCGTGGCAAATGCATGTAAATAT...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGTTCCTTGACTATTCCTaGCCACCCAGCCTACAGTTT +
Preference number: 4 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLFLDYS*PPSLQF
Trigger: AAACTGTAGGCTGGGTGGGCAGGAATAGTCAAGGAA...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR GCA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCATCCCCAACTTCTCTCTaGCAAGTCAAAAATTCTGGG +
Preference number: 4 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSSPTSL*QVKNSG
Trigger: CCCAGAATTTTTGACTTGGCAGAGAGAAGTTGGGGA...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CCA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATGGGGAGCTCTTCAAATaGTGTGCCCACAGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHGELFK*CAHRLD
Trigger: ATCCAGCCTGTGGGCACACCATTTGAAGAGCTCCCC...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGTGTGGTCTCTTCTTCTaGCAGCTCGAAGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRCGLFF*QLEVST
Trigger: AGTGGAGACTTCGAGCTGCCAGAAGAAGAGACCACA...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GTGTGTTCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTCAGCTACCACCTCATTaGCTGTGTCTGGTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: VCSVICLDWLGGQDCVWFQLPPH*LCLVVW
Trigger: CCACACAACCAGACACAGCCAATGAGGTGGTAGCTG...AAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGATTGCAGTACGTGTCTaGGGGTGTGTAAGTGATGCA +
Preference number: 4 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLIAVRV*GCVSDA
Trigger: TGCATCACTTACACACCCCCAGACACGTACTGCAAT...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGTGGAGACAATGTGTGTaGTGCCAGAGTGTGGGTGTA +
Preference number: 4 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRWRQCV*CQSVGV
Trigger: TACACCCACACTCTGGCACCACACACATTGTCTCCA...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGTGGAGACAATGTGTGTaGTGCCAGAGTGTGGGTGTA +
Preference number: 4 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGWRQCV*CQSVGV
Trigger: TACACCCACACTCTGGCACCACACACATTGTCTCCA...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GTGTGTTCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTGAAGGAGGGTTTTaGGACTGGAAGATGGAGCCC +
Preference number: 4 (lower is better)
Translates to: VCSVICLDWLGGQDCVWFCEGGF*DWKMEP
Trigger: GGGCTCCATCTTCCAGTCCCAAAACCCTCCTTCACA...AAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATAGAGAAGCCAGTGCCTaGAGCCCAAGCCCCAAATCA +
Preference number: 4 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHREASA*SPSPKS
Trigger: TGATTTGGGGCTTGGGCTCCAGGCACTGGCTTCTCT...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATCCTGGACATCTGCCTTaGGTCCAGGGATCCATGAAC +
Preference number: 4 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHPGHLP*VQGSMN
Trigger: GTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGG...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGCAGGGTTGTAGTTGTTaGGAGAAGAAATCCAGAGAA +
Preference number: 4 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRQGCSC*EKKSRE
Trigger: TTCTCTGGATTTCTTCTCCCAACAACTACAACCCTG...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGAGATGCAGAAAGAAATaGAGTCTGGGTACATGTGTA +
Preference number: 4 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRRCRKK*SLGTCV
Trigger: TACACATGTACCCAGACTTCATTTCTTTCTGCATCT...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGCTTTTGTCTTGTGTGTaGCTGAGTGAAAATATGGTG +
Preference number: 4 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRLLSCV*LSENMV
Trigger: CACCATATTTTCACTCAGTCACACACAAGACAAAAG...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATGCTCTTCAAATGGTGTaGCCACAGGCTGGATGTTCG +
Preference number: 4 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHALQMV*PQAGCS
Trigger: CGAACATCCAGCCTGTGGGCACACCATTTGAAGAGC...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTGTATGGTTTTGTCATTaGATGCTTTTGTCTTGTGTG +
Preference number: 4 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPVWFCH*MLLSCV
Trigger: CACACAAGACAAAAGCATGCAATGACAAAACCATAC...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp GTGTGTTCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTCTGGGCGGTCAGGATTaGGTATGGTTTTGTCATTGC +
Preference number: 4 (lower is better)
Translates to: VCSVICLDWLGGQDCVWFLGGQD*VWFCHC
Trigger: GCAATGACAAAACCATACGCAATCCTGACCGCCCAG...AAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATTTGAGGCAGGGGAACTaGTTGAGCAATCTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHLRQGN*LSNLAD
Trigger: GTCAGCCAGATTGCTCAAGCAGTTCCCCTGCCTCAA...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CCA 90 bp TGGGCGGTCAGGATTGCGTATGGTTTTGTCATTGCATGCTTTTGTCTTGTGTGTCAGCTACCACCTCATTaGCTGTGTCTGGTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: WAVRIAYGFVIACFCLVCQLPPH*LCLVVW
Trigger: CCACACAACCAGACACAGCCAATGAGGTGGTAGCTG...ACACACAAGACAAAAGCATGCAATGACAAAACCATACGCAATCCTGACCGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCAGGTCAGGATTGCGTATaGTTTTGTCATTGCATGCTT +
Preference number: 4 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSGQDCV*FCHCML
Trigger: AAGCATGCAATGACAAAACCATACGCAATCCTGACC...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR TCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGTTAAGGTTTTGGCCATaGACTCAGGACAGGTATGGT +
Preference number: 4 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRLRFWP*TQDRYG
Trigger: ACCATACCTGTCCTGAGTTCATGGCCAAAACCTTAA...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp TGGGCGGTCAGGATTGCGTATGGTTTTGTCATTGCATGCTTTTGTCTTGTGTGTCCTCCAGCGTGTAGCTaGCCTCATCCTTTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: WAVRIAYGFVIACFCLVCPPACS*PHPFSS
Trigger: TGAAGAAAAAGGATGAGGGCAGCTACACGCTGGAGG...ACACACAAGACAAAAGCATGCAATGACAAAACCATACGCAATCCTGACCGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp TGGGCGGTCAGGATTGCGTATGGTTTTGTCATTGCATGCTTTTGTCTTGTGTGTCTGGGCGGTCAGGATTaGGTATGGTTTTGTCATTGC +
Preference number: 4 (lower is better)
Translates to: WAVRIAYGFVIACFCLVCLGGQD*VWFCHC
Trigger: GCAATGACAAAACCATACGCAATCCTGACCGCCCAG...ACACACAAGACAAAAGCATGCAATGACAAAACCATACGCAATCCTGACCGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATTGTGCTTCCAGCAAATaGCAAAGCCCCTCAGAACAC +
Preference number: 4 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHCASSK*QSPSEH
Trigger: GTGTTCTGAGGGGCTTTGGCATTTGCTGGAAGCACA...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp GTGTGTTCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTATATTTACATGCATTTaGCACGCTGAGGCCAGGGTC +
Preference number: 4 (lower is better)
Translates to: VCSVICLDWLGGQDCVWFIFTCI*HAEARV
Trigger: GACCCTGGCCTCAGCGTGGCAAATGCATGTAAATAT...AAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TGGGCGGTCAGGATTGCGTATGGTTTTGTCATTGCATGCTTTTGTCTTGTGTGTTGTGGTCTCTTCTTCTaGCAGCTCGAAGTCTCCACT +
Preference number: 4 (lower is better)
Translates to: WAVRIAYGFVIACFCLVCCGLFF*QLEVST
Trigger: AGTGGAGACTTCGAGCTGCCAGAAGAAGAGACCACA...ACACACAAGACAAAAGCATGCAATGACAAAACCATACGCAATCCTGACCGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGCAGGAAGCTGTTTCTTaGGGGAAGATGCAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGQEAVS*GKMQKE
Trigger: TTCTTTCTGCATCTTCCCCCAAGAAACAGCTTCCTG...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp GTGTGTTCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTAGTAAGCCTGAAAGCTaGAGACAATGTGTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: VCSVICLDWLGGQDCVWFSKPES*RQCVWC
Trigger: GCACCACACACATTGTCTCCAGCTTTCAGGCTTACT...AAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCAATTTCCTCTTATAAATaGGCACAGCACAGGAAGTGT +
Preference number: 4 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSISSYK*AQHRKC
Trigger: ACACTTCCTGTGCTGTGCCCATTTATAAGAGGAAAT...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGGGTTTTGTCATTGCATaGTTTTGTCTTGTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRGFVIA*FCLVCD
Trigger: GTCACACACAAGACAAAAGCATGCAATGACAAAACC...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATATTTGGAACTCCCTGTaGTTCCAGCAAATGCCAAAG +
Preference number: 4 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHIWNSL*FQQMPK
Trigger: CTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAAT...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR GCA 90 bp GTGTGTTCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTCTCTGGAGCCACGCTaGCTACGAAAAATATTTACA +
Preference number: 4 (lower is better)
Translates to: VCSVICLDWLGGQDCVWFSLEPR*LRKIFT
Trigger: TGTAAATATTTTTCGTAGGCAGCGTGGCTCCAGAGA...AAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGAACTCAGGACAGGTATaGTTAATAAACAGGTTACAG +
Preference number: 4 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLNSGQV*LINRLQ
Trigger: CTGTAACCTGTTTATTAACCATACCTGTCCTGAGTT...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGAACTCAGGACAGGTATaGTTAATAAACAGGTTACAG +
Preference number: 4 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRNSGQV*LINRLQ
Trigger: CTGTAACCTGTTTATTAACCATACCTGTCCTGAGTT...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CCA 90 bp TGGGCGGTCAGGATTGCGTATGGTTTTGTCATTGCATGCTTTTGTCTTGTGTGTGAAAGAAATGAAGTCTaGGTACATGTGTACTTGGCA +
Preference number: 4 (lower is better)
Translates to: WAVRIAYGFVIACFCLVCERNEV*VHVYLA
Trigger: TGCCAAGTACACATGTACCCAGACTTCATTTCTTTC...ACACACAAGACAAAAGCATGCAATGACAAAACCATACGCAATCCTGACCGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS CCA 90 bp AGGGATGTCAGGCTCCTGGGTGGTGGCCGGCCTGGGAAGGGCTCTTaGCCGGGAGGTAGCTGTGCTGACCAGCCTGGGTGTTGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: RDVRLLGGGRPGKGS*PGGSCADQPGCWGL
Trigger: GAGGCCCCAACACCCAGGCTGGTCAGCACAGCTACCTCCCGGCCAAGAGCCCTTCCCAGGCCGGCCACCACCCAGGAGCCTGACATCCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS GCA 90 bp CCTTCCGCTCCAGGATACTCTTCTGAGGCAGCTGAGCAGCTGAGCTaGCCGAGTCGATGGCATTGTCCAGGAGGCCAGGGCCCGGGCGGG +
Preference number: 5 (lower is better)
Translates to: PSAPGYSSEAAEQLS*PSRWHCPGGQGPGG
Trigger: CCCGCCCGGGCCCTGGCCTCCTGGACAATGCCATCGACTCGGGCAGCTCAGCTGCTCAGCTGCCTCAGAAGAGTATCCTGGAGCGGAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS GCA 90 bp CATCCCCAGAGCCCTCCAGGTCCACGGGTCTCTCGAAGTTCTCACTaGGCCAGCGCTGGGCCTCACCAAGGCCCACAACACGGACCCACC +
Preference number: 5 (lower is better)
Translates to: HPQSPPGPRVSRSSH*ASAGPHQGPQHGPT
Trigger: GGTGGGTCCGTGTTGTGGGCCTTGGTGAGGCCCAGCGCTGGCGCAGTGAGAACTTCGAGAGACCCGTGGACCTGGAGGGCTCTGGGGATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471567.1
CDS CCA 90 bp CCGGGCGGGCACCCTTGGGCAGTGTCCCAGGTGGAGATGATGCCTTaGCCGCAGCCCCTCCCACAGCTACCACCTCATTGGCTGTGTCTG +
Preference number: 5 (lower is better)
Translates to: PGGHPWAVSQVEMMP*PQPLPQLPPHWLCL
Trigger: CAGACACAGCCAATGAGGTGGTAGCTGTGGGAGGGGCTGCGGCCAAGGCATCATCTCCACCTGGGACACTGCCCAAGGGTGCCCGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS CCA 90 bp GTGGGGCGCTCAGAGGGGAGCTCTTCAAATGGTGTGCCCACAGGCTaGATGTTCGTGGTGGGCAGCACCGCAGGTGTGGTGGACACCGCC +
Preference number: 5 (lower is better)
Translates to: VGRSEGSSSNGVPTG*MFVVGSTAGVVDTA
Trigger: GGCGGTGTCCACCACACCTGCGGTGCTGCCCACCACGAACATCCAGCCTGTGGGCACACCATTTGAAGAGCTCCCCTCTGAGCGCCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336798.11
ENST00000339394.7
ENST00000471567.1
CDS CCA 90 bp GGGCGCCTCGGGGGTAGTGGCCCGTGCCGTAGCCACTGTGGTCAGTaGGAGAGGCAGAAGCCTCCGTACGCCAGTGGTCCTTATAACAGC +
Preference number: 5 (lower is better)
Translates to: GRLGGSGPCRSHCGQ*ERQKPPYASGPYNS
Trigger: GCTGTTATAAGGACCACTGGCGTACGGAGGCTTCTGCCTCTCCCACTGACCACAGTGGCTACGGCACGGGCCACTACCCCCGAGGCGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCCTCTCTTGGACTGCCTaGCCCCGGTCAGGCCGGCCA +
Preference number: 5 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFLSWTA*PRSGRP
Trigger: TGGCCGGCCTGACCGGGGCAAGGCAGTCCAAGAGAG...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATCCTGCCCAGCCCTGGTaGCCACCCACATGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDPAQPW*PPTCLQ
Trigger: CTGGAGGCATGTGGGTGGCAACCAGGGCTGGGCAGG...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS TCA 90 bp CACCTCCTTCCGCTCCAGGATACTCTTCTGAGGCAGCTGAGCAGCTaGGCTGCCCGAGTCGATGGCATTGTCCAGGAGGCCAGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: HLLPLQDTLLRQLSS*AARVDGIVQEARAR
Trigger: CCGGGCCCTGGCCTCCTGGACAATGCCATCGACTCGGGCAGCTCAGCTGCTCAGCTGCCTCAGAAGAGTATCCTGGAGCGGAAGGAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS GCA 90 bp GGGAGCCAGCTCTGTGGCGTGCAGACCCCGTACCATCTCCTCAGATaGCAGCCCGTGCCCTCACTGGGCCCAGTCTCAGCTGCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: GSQLCGVQTPYHLLR*QPVPSLGPVSAAFF
Trigger: AAAGAAGGCAGCTGAGACTGGGCCCAGTGAGGGCACGGGCTGGCATCTGAGGAGATGGTACGGGGTCTGCACGCCACAGAGCTGGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS CCA 90 bp GGTGGGCAGCACCGCAGGTGTGGTGGACACCGCCAGGGCTACATCTaGGCTGAAGCGCATGGCTGTCTCAATGCCCGACTCCTGCTCGAA +
Preference number: 5 (lower is better)
Translates to: GGQHRRCGGHRQGYI*AEAHGCLNARLLLE
Trigger: TTCGAGCAGGAGTCGGGCATTGAGACAGCCATGCGCTTCAGCCCAGATGTAGCCCTGGCGGTGTCCACCACACCTGCGGTGCTGCCCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336798.11
ENST00000339394.7
ENST00000471567.1
CDS CCA 90 bp GTGGCAGCAGTGGTAGCCATGGTAGTGGAGACGGTGGTGGCTCTCTaGCTGGGCTCTTCCGGGACTTCTGTCACCACCAGGGGGCTGGTG +
Preference number: 5 (lower is better)
Translates to: VAAVVAMVVETVVAL*LGSSGTSVTTRGLV
Trigger: CACCAGCCCCCTGGTGGTGACAGAAGTCCCGGAAGAGCCCAGCCAGAGAGCCACCACCGTCTCCACTACCATGGCTACCACTGCTGCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336798.11
ENST00000339394.7
ENST00000471567.1
CDS-3UTR CAA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCGGGCCACCCCCACCATaGGCTCCAGCCCTACTGAGA +
Preference number: 5 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFGPPPP*APALLR
Trigger: TCTCAGTAGGGCTGGAGCCAATGGTGGGGGTGGCCC...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS TCA 90 bp GCAGCACCGCAGGTGTGGTGGACACCGCCAGGGCTACATCTGGGCTaGAGCGCATGGCTGTCTCAATGCCCGACTCCTGCTCGAAGTAGC +
Preference number: 5 (lower is better)
Translates to: AAPQVWWTPPGLHLG*SAWLSQCPTPARSS
Trigger: GCTACTTCGAGCAGGAGTCGGGCATTGAGACAGCCATGCGCTTCAGCCCAGATGTAGCCCTGGCGGTGTCCACCACACCTGCGGTGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000339394.7
ENST00000471567.1
CDS TCA 90 bp GCAGCACCGCAGGTGTGGTGGACACCGCCAGGGCTACATCTGGGCTaGAGCGCATGGCTGTCTCAATGCCCGACTCCTGCTCGAAGTCTG +
Preference number: 5 (lower is better)
Translates to: AAPQVWWTPPGLHLG*SAWLSQCPTPARSL
Trigger: CAGACTTCGAGCAGGAGTCGGGCATTGAGACAGCCATGCGCTTCAGCCCAGATGTAGCCCTGGCGGTGTCCACCACACCTGCGGTGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CAA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTCTCTCTTGGACTGCCTaGCCCCGGTCAGGCCGGCCA +
Preference number: 5 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPLSWTA*PRSGRP
Trigger: TGGCCGGCCTGACCGGGGCAAGGCAGTCCAAGAGAG...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS CCA 90 bp AGGGGAGCTCTTCAAATGGTGTGCCCACAGGCTGGATGTTCGTGGTaGGCAGCACCGCAGGTGTGGTGGACACCGCCAGGGCTACATCTG +
Preference number: 5 (lower is better)
Translates to: RGALQMVCPQAGCSW*AAPQVWWTPPGLHL
Trigger: CAGATGTAGCCCTGGCGGTGTCCACCACACCTGCGGTGCTGCCCACCACGAACATCCAGCCTGTGGGCACACCATTTGAAGAGCTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336798.11
ENST00000339394.7
ENST00000471567.1
CDS CCA 90 bp CAGAGGGGAGCTCTTCAAATGGTGTGCCCACAGGCTGGATGTTCGTaGTGGGCAGCACCGCAGGTGTGGTGGACACCGCCAGGGCTACAT +
Preference number: 5 (lower is better)
Translates to: QRGALQMVCPQAGCS*WAAPQVWWTPPGLH
Trigger: ATGTAGCCCTGGCGGTGTCCACCACACCTGCGGTGCTGCCCACCACGAACATCCAGCCTGTGGGCACACCATTTGAAGAGCTCCCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336798.11
ENST00000339394.7
ENST00000471567.1
CDS-3UTR CAA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTCCCGAGTCGATGGCATaGTCCAGGAGGCCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPPESMA*SRRPGP
Trigger: GGGCCCTGGCCTCCTGGACAATGCCATCGACTCGGG...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCCCCGAGTCGATGGCATaGTCCAGGAGGCCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSPESMA*SRRPGP
Trigger: GGGCCCTGGCCTCCTGGACAATGCCATCGACTCGGG...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCAAACTGCACCCACTGTaGGGTCTCCCACCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFKLHPL*GLPPGV
Trigger: GACCCCAGGTGGGAGACCCAACAGTGGGTGCAGTTT...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTGGGCCACCCCCACCATaGGCTCCAGCCCTACTGAGA +
Preference number: 5 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPGPPPP*APALLR
Trigger: TCTCAGTAGGGCTGGAGCCAATGGTGGGGGTGGCCC...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp CCCTGGAACCTCCCCCTCACTGCCTACACACCGCTACCCCTCATCCTGCAGAAACCGGCCAGGGCAGATTaGGGCTGGTCAGACTCCTCA +
Preference number: 5 (lower is better)
Translates to: PWNLPLTAYTPLPLILQKPARAD*GWSDSS
Trigger: TGAGGAGTCTGACCAGCCCAAATCTGCCCTGGCCGG...TTTCTGCAGGATGAGGGGTAGCGGTGTGTAGGCAGTGAGGGGGAGGTTCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGCCCGGGCGGGCACCCTaGGGCAGTGTCCCAGGTGGA +
Preference number: 5 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLPGRAP*GSVPGG
Trigger: TCCACCTGGGACACTGCCCAAGGGTGCCCGCCCGGG...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATGCCTGGACATCTGCCTaGGGTCCAGGGATCCATGAA +
Preference number: 5 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDAWTSA*GPGIHE
Trigger: TTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGC...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS GCA 90 bp GGGCCATCCCAGGCACCACTTGAAGCACCTGCCCTGTGTCATCACTaGCCTAACCCCACCATTGGCCACAGCTTATTGCACCTGACGGGA +
Preference number: 5 (lower is better)
Translates to: GPSQAPLEAPALCHH*PNPTIGHSLLHLTG
Trigger: TCCCGTCAGGTGCAATAAGCTGTGGCCAATGGTGGGGTTAGGGCAGTGATGACACAGGGCAGGTGCTTCAAGTGGTGCCTGGGATGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS GCA 90 bp TCTGTGGCGTGCAGACCCCGTACCATCTCCTCAGATGCCAGCCCGTaGCCTCACTGGGCCCAGTCTCAGCTGCCTTCTTTTTGCTACCAT +
Preference number: 5 (lower is better)
Translates to: SVACRPRTISSDASP*PHWAQSQLPSFCYH
Trigger: ATGGTAGCAAAAAGAAGGCAGCTGAGACTGGGCCCAGTGAGGGCACGGGCTGGCATCTGAGGAGATGGTACGGGGTCTGCACGCCACAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CAA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGGGAAGGTCTCTGGAGTaGGGGTCTGAGCCACCTCTG +
Preference number: 5 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGGRSLE*GSEPPL
Trigger: CAGAGGTGGCTCAGACCCCAACTCCAGAGACCTTCC...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp AGCTCCCTCTCATTTGGAACTCCCTGTGCTTCCAGCAAATGCCAAAGCCCCTCACCTGCCCAGCCCTGGTaGCCACCCACATGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: SSLSFGTPCASSKCQSPSPAQPW*PPTCLQ
Trigger: CTGGAGGCATGTGGGTGGCAACCAGGGCTGGGCAGG...TGAGGGGCTTTGGCATTTGCTGGAAGCACAGGGAGTTCCAAATGAGAGGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp GACAAGGGACACCCTCTCACCCAGCTAGAGAGAGGCCCTGGGATACGAGCAAGACATCCCAGGCACCACTaGAAGCACCTGCCCTGTGTC +
Preference number: 5 (lower is better)
Translates to: DKGHPLTQLERGPGIRARHPRHH*KHLPCV
Trigger: GACACAGGGCAGGTGCTTCAAGTGGTGCCTGGGATG...TCTTGCTCGTATCCCAGGGCCTCTCTCTAGCTGGGTGAGAGGGTGTCCCTTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CAA 90 bp GAAGCCAGGCCCACCTGCATGCAATGCCCTAAAAGGGCTGTGGCCCCACACTTTCTGGCTCATCCCGGATaGTGGTCAGGAAGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: EARPTCMQCPKRAVAPHFLAHPG*WSGRSL
Trigger: CAGAGACCTTCCTGACCACAATCCGGGATGAGCCAG...AAAGTGTGGGGCCACAGCCCTTTTAGGGCATTGCATGCAGGTGGGCCTGGCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCTTGGCGGCTGCATGGTaGGTGTGGGCACCATGGCAT +
Preference number: 5 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSLAAAW*VWAPWH
Trigger: ATGCCATGGTGCCCACACCAACCATGCAGCCGCCAA...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp GTGGCAGGGATGAGGGGAACAAGAGATGAGCTCGTAAGGGCACAGTCTGGGGCAGCCCTCACAGGCACTTaGGAGACTTGTGTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: VAGMRGTRDELVRAQSGAALTGT*ETCVLG
Trigger: TCCCAGGACACAAGTCTCCAAAGTGCCTGTGAGGGC...TGCCCCAGACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTCATCCCTGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTTCACACCACATCCCTTaGGCTCCAAGAGGCCCCCTG +
Preference number: 5 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPSHHIP*APRGPL
Trigger: CAGGGGGCCTCTTGGAGCCAAAGGGATGTGGTGTGA...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGCCGGCCAGGGCAGATTaGGGCTGGTCAGACTCCTCA +
Preference number: 5 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRPARAD*GWSDSS
Trigger: TGAGGAGTCTGACCAGCCCAAATCTGCCCTGGCCGG...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGATTGGCCACAGCTTATaGCACCTGACGGGACCACCG +
Preference number: 5 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGIGHSL*HLTGPP
Trigger: CGGTGGTCCCGTCAGGTGCAATAAGCTGTGGCCAAT...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CAA 90 bp CCCTGGAACCTCCCCCTCACTGCCTACACACCGCTACCCCTCATCCTGCAGAAAAGAGGCTCAAAGGACTaGGCTAAGGAGGGGAGACCA +
Preference number: 5 (lower is better)
Translates to: PWNLPLTAYTPLPLILQKRGSKD*AKEGRP
Trigger: TGGTCTCCCCTCCTTAGCCAAGTCCTTTGAGCCTCT...TTTCTGCAGGATGAGGGGTAGCGGTGTGTAGGCAGTGAGGGGGAGGTTCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CAA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATCCCGGGCGGGCACCCTaGGGCAGTGTCCCAGGTGGA +
Preference number: 5 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHPGRAP*GSVPGG
Trigger: TCCACCTGGGACACTGCCCAAGGGTGCCCGCCCGGG...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp AGAAGAAATCCAGAGAACACAGGAGGCAGCCACTCCTACCCCATGAGGCAGAGGTTGGCGGCTGCATGGTaGGTGTGGGCACCATGGCAT +
Preference number: 5 (lower is better)
Translates to: RRNPENTGGSHSYPMRQRLAAAW*VWAPWH
Trigger: ATGCCATGGTGCCCACACCAACCATGCAGCCGCCAA...CCTCTGCCTCATGGGGTAGGAGTGGCTGCCTCCTGTGTTCTCTGGATTTCTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGTGCATCCACATGGGATaGTGTCTGACACTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGCIHMG*CLTLAG
Trigger: CCCAGCCAGTGTCAGACACAATCCCATGTGGATGCA...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp CCCTGGAACCTCCCCCTCACTGCCTACACACCGCTACCCCTCATCCTGCAGAAACAGAGCAAGAAGAACTaGCCTGACCCAGGCAGTGAA +
Preference number: 5 (lower is better)
Translates to: PWNLPLTAYTPLPLILQKQSKKN*PDPGSE
Trigger: TTCACTGCCTGGGTCAGGCAAGTTCTTCTTGCTCTG...TTTCTGCAGGATGAGGGGTAGCGGTGTGTAGGCAGTGAGGGGGAGGTTCCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CAA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCGCCCTAACCCCACCATaGGCCACAGCTTATTGCACC +
Preference number: 5 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSALTPP*ATAYCT
Trigger: GGTGCAATAAGCTGTGGCCAATGGTGGGGTTAGGGC...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS TCA 90 bp AAAGATGCAGACGTGGGACCCTGGAGACCTGGACATTCTGGGCCCTaGGGTCCTCCCAGGTCTTGTTCTATCCCCAGAAGGATGTTCTGC +
Preference number: 5 (lower is better)
Translates to: KDADVGPWRPGHSGP*GPPRSCSIPRRMFC
Trigger: GCAGAACATCCTTCTGGGGATAGAACAAGACCTGGGAGGACCTCAGGGCCCAGAATGTCCAGGTCTCCAGGGTCCCACGTCTGCATCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS TCA 90 bp GTCATCACTGCCCTAACCCCACCATTGGCCACAGCTTATTGCACCTaGCGGGACCACCGGAACCAAGCAAGGTCTGCAGAGAAAGCCACA +
Preference number: 5 (lower is better)
Translates to: VITALTPPLATAYCT*RDHRNQARSAEKAT
Trigger: TGTGGCTTTCTCTGCAGACCTTGCTTGGTTCCGGTGGTCCCGTCAGGTGCAATAAGCTGTGGCCAATGGTGGGGTTAGGGCAGTGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS CCA 90 bp CACACACAAAGATGCAGACGTGGGACCCTGGAGACCTGGACATTCTaGGCCCTGAGGTCCTCCCAGGTCTTGTTCTATCCCCAGAAGGAT +
Preference number: 5 (lower is better)
Translates to: HTQRCRRGTLETWTF*ALRSSQVLFYPQKD
Trigger: ATCCTTCTGGGGATAGAACAAGACCTGGGAGGACCTCAGGGCCCAGAATGTCCAGGTCTCCAGGGTCCCACGTCTGCATCTTTGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS CCA 90 bp AAGGTCTGCAGAGAAAGCCACATAGCACACACAAAGATGCAGACGTaGGACCCTGGAGACCTGGACATTCTGGGCCCTGAGGTCCTCCCA +
Preference number: 5 (lower is better)
Translates to: KVCRESHIAHTKMQT*DPGDLDILGPEVLP
Trigger: TGGGAGGACCTCAGGGCCCAGAATGTCCAGGTCTCCAGGGTCCCACGTCTGCATCTTTGTGTGTGCTATGTGGCTTTCTCTGCAGACCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CAA 90 bp GGACCCAGCCCTTCTGCTCCAAAGATGACTGAGGCCAACCCGCCCCCTCCAGATACCATGACTAGTGACTaGCATTGCAGTACGTGTCTG +
Preference number: 5 (lower is better)
Translates to: GPSPSAPKMTEANPPPPDTMTSD*HCSTCL
Trigger: CAGACACGTACTGCAATGCAAGTCACTAGTCATGGT...ATCTGGAGGGGGCGGGTTGGCCTCAGTCATCTTTGGAGCAGAAGGGCTGGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTTGTTTCCCTCCAGCATaGAGAGCAGGTCATGTGGAG +
Preference number: 5 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPCFPPA*RAGHVE
Trigger: CTCCACATGACCTGCTCTCAATGCTGGAGGGAAACA...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp CCCAGCCCTGGTTGCCACCCACATGCCTCCAGCGATCAAGGGGACCAGTCTTTCAAGCTGCAGCCAGAATaGTTTGGCCAAATAGGTGAG +
Preference number: 5 (lower is better)
Translates to: PSPGCHPHASSDQGDQSFKLQPE*FGQIGE
Trigger: CTCACCTATTTGGCCAAACAATTCTGGCTGCAGCTT...GAAAGACTGGTCCCCTTGATCGCTGGAGGCATGTGGGTGGCAACCAGGGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp GTGGCAGGGATGAGGGGAACAAGAGATGAGCTCGTAAGGGCACAGTCTGGGGCAGATGTTCTGCCCTTCTaGTTCTGGGGATCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: VAGMRGTRDELVRAQSGADVLPF*FWGSRA
Trigger: TGCTCTGGATCCCCAGAACAAGAAGGGCAGAACATC...TGCCCCAGACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTCATCCCTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS GCA 90 bp GATGTTCTGCCCTTCTTGTTCTGGGGATCCAGAGCAAGAAGAACTTaGCTGACCCAGGCAGTGAATGCCCCCTGCCTCACTGAAGCAAGC +
Preference number: 5 (lower is better)
Translates to: DVLPFLFWGSRARRT*LTQAVNAPCLTEAS
Trigger: GCTTGCTTCAGTGAGGCAGGGGGCATTCACTGCCTGGGTCAGGCAAGTTCTTCTTGCTCTGGATCCCCAGAACAAGAAGGGCAGAACATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CAA 90 bp GTGGCAGGGATGAGGGGAACAAGAGATGAGCTCGTAAGGGCACAGTCTGGGGCATGGGTACATGTGTACTaGGCAGGCAAGAGGAGAGAT +
Preference number: 5 (lower is better)
Translates to: VAGMRGTRDELVRAQSGAWVHVY*AGKRRD
Trigger: ATCTCTCCTCTTGCCTGCCAAGTACACATGTACCCA...TGCCCCAGACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTCATCCCTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp GACAAGGGACACCCTCTCACCCAGCTAGAGAGAGGCCCTGGGATACGAGCAAGATGGGTACATGTGTACTaGGCAGGCAAGAGGAGAGAT +
Preference number: 5 (lower is better)
Translates to: DKGHPLTQLERGPGIRARWVHVY*AGKRRD
Trigger: ATCTCTCCTCTTGCCTGCCAAGTACACATGTACCCA...TCTTGCTCGTATCCCAGGGCCTCTCTCTAGCTGGGTGAGAGGGTGTCCCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCTGTTTCCCTCCAGCATaGAGAGCAGGTCATGTGGAG +
Preference number: 5 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSCFPPA*RAGHVE
Trigger: CTCCACATGACCTGCTCTCAATGCTGGAGGGAAACA...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp GACAAGGGACACCCTCTCACCCAGCTAGAGAGAGGCCCTGGGATACGAGCAAGAGCTAAAGGTGGTCAGTaGCTGATGTTCCCCAACTTC +
Preference number: 5 (lower is better)
Translates to: DKGHPLTQLERGPGIRARAKGGQ*LMFPNF
Trigger: GAAGTTGGGGAACATCAGCAACTGACCACCTTTAGC...TCTTGCTCGTATCCCAGGGCCTCTCTCTAGCTGGGTGAGAGGGTGTCCCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CAA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGGGAAGGTCTCTGGAGTaGGGGTCTGAGCCACCTCTG +
Preference number: 5 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGGRSLE*GSEPPL
Trigger: CAGAGGTGGCTCAGACCCCAACTCCAGAGACCTTCC...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATGGTGGAGATGATGCCTaGGCCGCAGCCCCTCCCACA +
Preference number: 5 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHGGDDA*AAAPPT
Trigger: TGTGGGAGGGGCTGCGGCCAAGGCATCATCTCCACC...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp GTGGCAGGGATGAGGGGAACAAGAGATGAGCTCGTAAGGGCACAGTCTGGGGCAACCATGACTAGTGACTaGCATTGCAGTACGTGTCTG +
Preference number: 5 (lower is better)
Translates to: VAGMRGTRDELVRAQSGATMTSD*HCSTCL
Trigger: CAGACACGTACTGCAATGCAAGTCACTAGTCATGGT...TGCCCCAGACTGTGCCCTTACGAGCTCATCTCTTGTTCCCCTCATCCCTGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAAACTGCACCCACTGTaGGGTCTCCCACCTGGGGTC +
Preference number: 5 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGKLHPL*GLPPGV
Trigger: GACCCCAGGTGGGAGACCCAACAGTGGGTGCAGTTT...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGAGGCAGGGGAACTGCTaGAGCAATCTGGCTGACGCA +
Preference number: 5 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLRQGNC*SNLADA
Trigger: TGCGTCAGCCAGATTGCTCAAGCAGTTCCCCTGCCT...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CAA 90 bp AAAGCCTGGACATCTGCCTTGGGTCCAGGGATCCATGAACAAGGCCCCTGGCCTACAGTTTCTATGAGGTaGAATCCAGGCAGCAGCAAC +
Preference number: 5 (lower is better)
Translates to: KAWTSALGPGIHEQGPWPTVSMR*NPGSSN
Trigger: GTTGCTGCTGCCTGGATTCAACCTCATAGAAACTGT...AGGCCAGGGGCCTTGTTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CAA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCAAGCTGCAGCCAGAATaGTTTGGCCAAATAGGTGAG +
Preference number: 5 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSKLQPE*FGQIGE
Trigger: CTCACCTATTTGGCCAAACAATTCTGGCTGCAGCTT...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTCTTTTTGCTACCATTTaGAGAGCTCCTCCTCTGTGC +
Preference number: 5 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPLFATI*RAPPLC
Trigger: GCACAGAGGAGGAGCTCTCAAAATGGTAGCAAAAAG...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CAA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTGATACGAGCAAGAGGTaGCAGTGTCTAGATGATTTC +
Preference number: 5 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPDTSKR*QCLDDF
Trigger: GAAATCATCTAGACACTGCAACCTCTTGCTCGTATC...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATTCACACCACATCCCTTaGGCTCCAAGAGGCCCCCTG +
Preference number: 5 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHSHHIP*APRGPL
Trigger: CAGGGGGCCTCTTGGAGCCAAAGGGATGTGGTGTGA...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp GTGTGTTCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTGCCTGGACATCTGCCTaGGGTCCAGGGATCCATGAA +
Preference number: 5 (lower is better)
Translates to: VCSVICLDWLGGQDCVWFAWTSA*GPGIHE
Trigger: TTCATGGATCCCTGGACCCAAGGCAGATGTCCAGGC...AAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGAACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp GAAGCCAGGCCCACCTGCATGCAATGCCCTAAAAGGGCTGTGGCCCCACACTTTGTAAATCTGTACAGTTaGCGGGCTTCTATTTACAGG +
Preference number: 5 (lower is better)
Translates to: EARPTCMQCPKRAVAPHFVNLYS*RASIYR
Trigger: CCTGTAAATAGAAGCCCGCAAACTGTACAGATTTAC...AAAGTGTGGGGCCACAGCCCTTTTAGGGCATTGCATGCAGGTGGGCCTGGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS CCA 90 bp CAGGTCTTGTTCTATCCCCAGAAGGATGTTCTGCCCTTCTTGTTCTaGGGATCCAGAGCAAGAAGAACTTGCCTGACCCAGGCAGTGAAT +
Preference number: 5 (lower is better)
Translates to: QVLFYPQKDVLPFLF*GSRARRTCLTQAVN
Trigger: ATTCACTGCCTGGGTCAGGCAAGTTCTTCTTGCTCTGGATCCCCAGAACAAGAAGGGCAGAACATCCTTCTGGGGATAGAACAAGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS-3UTR CAA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATCTGGCTCATCCCGGATaGTGGTCAGGAAGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHLAHPG*WSGRSL
Trigger: CAGAGACCTTCCTGACCACAATCCGGGATGAGCCAG...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp ACCATTGGCTCCAGCCCTACTGAGAAACTGCACCCACTGTTGGGTCTCCCACCTGGATTGCGTATGGTTTaGTCATTGCATGCTTTTGTC +
Preference number: 5 (lower is better)
Translates to: TIGSSPTEKLHPLLGLPPGLRMV*SLHAFV
Trigger: GACAAAAGCATGCAATGACAAAACCATACGCAATCC...AGGTGGGAGACCCAACAGTGGGTGCAGTTTCTCAGTAGGGCTGGAGCCAATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp AAAGGGCTGTGGCCCCACACTTTTTCCGAGAAAGGCAAGGGCCTGCCTGTTTCCGGATTGCGTATGGTTTaGTCATTGCATGCTTTTGTC +
Preference number: 5 (lower is better)
Translates to: KGLWPHTFSEKGKGLPVSGLRMV*SLHAFV
Trigger: GACAAAAGCATGCAATGACAAAACCATACGCAATCC...GGAAACAGGCAGGCCCTTGCCTTTCTCGGAAAAAGTGTGGGGCCACAGCCCTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATGCCCTCACAGGCACTTaGGAGACTTGTGTCCTGGGA +
Preference number: 5 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHALTGT*ETCVLG
Trigger: TCCCAGGACACAAGTCTCCAAAGTGCCTGTGAGGGC...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp TCCAGCAAATGCCAAAGCCCCTCAGAACACTCCATCACAGGCAGGGGTAGGGGGTTCTTATTTAAGGTTTaGGCCATGAACTCAGGACAG +
Preference number: 5 (lower is better)
Translates to: SSKCQSPSEHSITGRGRGFLFKV*AMNSGQ
Trigger: CTGTCCTGAGTTCATGGCCAAAACCTTAAATAAGAA...CCCCCTACCCCTGCCTGTGATGGAGTGTTCTGAGGGGCTTTGGCATTTGCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATTGCATCCACATGGGATaGTGTCTGACACTGGCTGGG +
Preference number: 5 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHCIHMG*CLTLAG
Trigger: CCCAGCCAGTGTCAGACACAATCCCATGTGGATGCA...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGTCAGGAAGCTGTTTCTaGGGGGAAGATGCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRSGSCF*GEDAER
Trigger: TCTTTCTGCATCTTCCCCCAAGAAACAGCTTCCTGA...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATGCTGGGCGGTCAGGATaGCGTATGGTTTTGTCATTG +
Preference number: 5 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHAGRSG*RMVLSL
Trigger: CAATGACAAAACCATACGCAATCCTGACCGCCCAGC...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp TGGGCGGTCAGGATTGCGTATGGTTTTGTCATTGCATGCTTTTGTCTTGTGTGTGCTGGGCGGTCAGGATaGCGTATGGTTTTGTCATTG +
Preference number: 5 (lower is better)
Translates to: WAVRIAYGFVIACFCLVCAGRSG*RMVLSL
Trigger: CAATGACAAAACCATACGCAATCCTGACCGCCCAGC...ACACACAAGACAAAAGCATGCAATGACAAAACCATACGCAATCCTGACCGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp CTCTGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGGATACGAGCAAGAGGTaGCAGTGTCTAGATGATTTC +
Preference number: 5 (lower is better)
Translates to: LCKSVQFAGFYLQARGLGDTSKR*QCLDDF
Trigger: GAAATCATCTAGACACTGCAACCTCTTGCTCGTATC...CCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp TCTGTGATATGTCTTGATTGGCTGGGCGGTCAGGATTGCGTATGGTTTTGTCATTCAGGAAGCTGTTTCTaGGGGGAAGATGCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: SVICLDWLGGQDCVWFCHSGSCF*GEDAER
Trigger: TCTTTCTGCATCTTCCCCCAAGAAACAGCTTCCTGA...ATGACAAAACCATACGCAATCCTGACCGCCCAGCCAATCAAGACATATCACAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGCGTATGGTTTTGTCATaGCATGCTTTTGTCTTGTGT +
Preference number: 5 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLRMVLS*HAFVLC
Trigger: ACACAAGACAAAAGCATGCAATGACAAAACCATACG...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGGTAAATCTGTACAGTTaGCGGGCTTCTATTTACAGG +
Preference number: 5 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRVNLYS*RASIYR
Trigger: CCTGTAAATAGAAGCCCGCAAACTGTACAGATTTAC...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp TCCAGCATTGAGAGCAGGTCATGTGGAGTGAGACTGTGCATCCACATGGGATTGTTCTTATTTAAGGTTTaGGCCATGAACTCAGGACAG +
Preference number: 5 (lower is better)
Translates to: SSIESRSCGVRLCIHMGLFLFKV*AMNSGQ
Trigger: CTGTCCTGAGTTCATGGCCAAAACCTTAAATAAGAA...CAATCCCATGTGGATGCACAGTCTCACTCCACATGACCTGCTCTCAATGCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS-3UTR CAA 90 bp TGTAAATCTGTACAGTTTGCGGGCTTCTATTTACAGGCAAGAGGCCTGGGGAGGCGTATGGTTTTGTCATaGCATGCTTTTGTCTTGTGT +
Preference number: 5 (lower is better)
Translates to: CKSVQFAGFYLQARGLGRRMVLS*HAFVLC
Trigger: ACACAAGACAAAAGCATGCAATGACAAAACCATACG...CCTCCCCAGGCCTCTTGCCTGTAAATAGAAGCCCGCAAACTGTACAGATTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS CCA 72 bp TGGCCGGGAGGTAGCTGTGCTGACCAGCCTGGGTGTTaGGGCCTCGGTGTCCAAGACAGCCGCCGTGGTGGG +
Preference number: 6 (lower is better)
Translates to: WPGGSCADQPGC*GLGVQDSRRGG
Trigger: CCCACCACGGCGGCTGTCTTGGACACCGAGGCCCCAACACCCAGGCTGGTCAGCACAGCTACCTCCCGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS CCA 72 bp TCTGAGGCAGCTGAGCAGCTGAGCTGCCCGAGTCGATaGCATTGTCCAGGAGGCCAGGGCCCGGGCGGGCAC +
Preference number: 6 (lower is better)
Translates to: SEAAEQLSCPSR*HCPGGQGPGGH
Trigger: GTGCCCGCCCGGGCCCTGGCCTCCTGGACAATGCCATCGACTCGGGCAGCTCAGCTGCTCAGCTGCCTCAGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS CAA 90 bp CCCGGGCGGGCACCCTTGGGCAGTGTCCCAGGTGGAGATGATGCCTaGGCCGCAGCCCCTCCCACAGCTACCACCTCATTGGCTGTGTCT +
Preference number: 6 (lower is better)
Translates to: PGRAPLGSVPGGDDA*AAAPPTATTSLAVS
Trigger: AGACACAGCCAATGAGGTGGTAGCTGTGGGAGGGGCTGCGGCCAAGGCATCATCTCCACCTGGGACACTGCCCAAGGGTGCCCGCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS CCA 72 bp GGGGGTAGTGGCCCGTGCCGTAGCCACTGTGGTCAGTaGGAGAGGCAGAAGCCTCCGTACGCCAGTGGTCCT +
Preference number: 6 (lower is better)
Translates to: GGSGPCRSHCGQ*ERQKPPYASGP
Trigger: AGGACCACTGGCGTACGGAGGCTTCTGCCTCTCCCACTGACCACAGTGGCTACGGCACGGGCCACTACCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS GCA 72 bp GGGTGGGGCGCTCAGAGGGGAGCTCTTCAAATGGTGTaGCCACAGGCTGGATGTTCGTGGTGGGCAGCACCG +
Preference number: 6 (lower is better)
Translates to: GWGAQRGALQMV*PQAGCSWWAAP
Trigger: CGGTGCTGCCCACCACGAACATCCAGCCTGTGGGCACACCATTTGAAGAGCTCCCCTCTGAGCGCCCCACCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336798.11
ENST00000339394.7
ENST00000471567.1
CDS GCA 72 bp CTCTGTGGCGTGCAGACCCCGTACCATCTCCTCAGATaGCAGCCCGTGCCCTCACTGGGCCCAGTCTCAGCT +
Preference number: 6 (lower is better)
Translates to: LCGVQTPYHLLR*QPVPSLGPVSA
Trigger: AGCTGAGACTGGGCCCAGTGAGGGCACGGGCTGGCATCTGAGGAGATGGTACGGGGTCTGCACGCCACAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS CCA 72 bp CTTCAAATGGTGTGCCCACAGGCTGGATGTTCGTGGTaGGCAGCACCGCAGGTGTGGTGGACACCGCCAGGG +
Preference number: 6 (lower is better)
Translates to: LQMVCPQAGCSW*AAPQVWWTPPG
Trigger: CCCTGGCGGTGTCCACCACACCTGCGGTGCTGCCCACCACGAACATCCAGCCTGTGGGCACACCATTTGAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336798.11
ENST00000339394.7
ENST00000471567.1
CDS CCA 72 bp CACCCTTGGGCAGTGTCCCAGGTGGAGATGATGCCTTaGCCGCAGCCCCTCCCACAGCTACCACCTCATTGG +
Preference number: 6 (lower is better)
Translates to: HPWAVSQVEMMP*PQPLPQLPPHW
Trigger: CCAATGAGGTGGTAGCTGTGGGAGGGGCTGCGGCCAAGGCATCATCTCCACCTGGGACACTGCCCAAGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS CAA 72 bp GCACCCTTGGGCAGTGTCCCAGGTGGAGATGATGCCTaGGCCGCAGCCCCTCCCACAGCTACCACCTCATTG +
Preference number: 6 (lower is better)
Translates to: APLGSVPGGDDA*AAAPPTATTSL
Trigger: CAATGAGGTGGTAGCTGTGGGAGGGGCTGCGGCCAAGGCATCATCTCCACCTGGGACACTGCCCAAGGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS TCA 72 bp CAGGTGTGGTGGACACCGCCAGGGCTACATCTGGGCTaGAGCGCATGGCTGTCTCAATGCCCGACTCCTGCT +
Preference number: 6 (lower is better)
Translates to: QVWWTPPGLHLG*SAWLSQCPTPA
Trigger: AGCAGGAGTCGGGCATTGAGACAGCCATGCGCTTCAGCCCAGATGTAGCCCTGGCGGTGTCCACCACACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336798.11
ENST00000339394.7
ENST00000471567.1
CDS TCA 72 bp CCGCTCCAGGATACTCTTCTGAGGCAGCTGAGCAGCTaGGCTGCCCGAGTCGATGGCATTGTCCAGGAGGCC +
Preference number: 6 (lower is better)
Translates to: PLQDTLLRQLSS*AARVDGIVQEA
Trigger: GGCCTCCTGGACAATGCCATCGACTCGGGCAGCTCAGCTGCTCAGCTGCCTCAGAAGAGTATCCTGGAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS GCA 72 bp CCAGGATACTCTTCTGAGGCAGCTGAGCAGCTGAGCTaGCCGAGTCGATGGCATTGTCCAGGAGGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: PGYSSEAAEQLS*PSRWHCPGGQG
Trigger: GCCCTGGCCTCCTGGACAATGCCATCGACTCGGGCAGCTCAGCTGCTCAGCTGCCTCAGAAGAGTATCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS CCA 72 bp GCTCTTCAAATGGTGTGCCCACAGGCTGGATGTTCGTaGTGGGCAGCACCGCAGGTGTGGTGGACACCGCCA +
Preference number: 6 (lower is better)
Translates to: ALQMVCPQAGCS*WAAPQVWWTPP
Trigger: TGGCGGTGTCCACCACACCTGCGGTGCTGCCCACCACGAACATCCAGCCTGTGGGCACACCATTTGAAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336798.11
ENST00000339394.7
ENST00000471567.1
CDS CCA 72 bp GAGCACCGAGGGGCACACAGTTGCTACATGGCAGAGTaGGGTTCGCGGTGCCCTTCTCTCCCGAGATTCTGC +
Preference number: 6 (lower is better)
Translates to: EHRGAHSCYMAE*GSRCPSLPRFC
Trigger: GCAGAATCTCGGGAGAGAAGGGCACCGCGAACCCCACTCTGCCATGTAGCAACTGTGTGCCCCTCGGTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS GCA 72 bp TGCAGACCCCGTACCATCTCCTCAGATGCCAGCCCGTaGCCTCACTGGGCCCAGTCTCAGCTGCCTTCTTTT +
Preference number: 6 (lower is better)
Translates to: CRPRTISSDASP*PHWAQSQLPSF
Trigger: AAAAGAAGGCAGCTGAGACTGGGCCCAGTGAGGGCACGGGCTGGCATCTGAGGAGATGGTACGGGGTCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS CCA 72 bp TCAGAGGGGAGCTCTTCAAATGGTGTGCCCACAGGCTaGATGTTCGTGGTGGGCAGCACCGCAGGTGTGGTG +
Preference number: 6 (lower is better)
Translates to: SEGSSSNGVPTG*MFVVGSTAGVV
Trigger: CACCACACCTGCGGTGCTGCCCACCACGAACATCCAGCCTGTGGGCACACCATTTGAAGAGCTCCCCTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336798.11
ENST00000339394.7
ENST00000471567.1
CDS CCA 72 bp CTCTGGCTCATCCCGGATTGTGGTCAGGAAGGTCTCTaGAGTTGGGGTCTGAGCCACCTCTGTGGGTCCAGG +
Preference number: 6 (lower is better)
Translates to: LWLIPDCGQEGL*SWGLSHLCGSR
Trigger: CCTGGACCCACAGAGGTGGCTCAGACCCCAACTCCAGAGACCTTCCTGACCACAATCCGGGATGAGCCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS CCA 72 bp CCCCACTCACCGGAACCTCTGGCTCATCCCGGATTGTaGTCAGGAAGGTCTCTGGAGTTGGGGTCTGAGCCA +
Preference number: 6 (lower is better)
Translates to: PHSPEPLAHPGL*SGRSLELGSEP
Trigger: TGGCTCAGACCCCAACTCCAGAGACCTTCCTGACCACAATCCGGGATGAGCCAGAGGTTCCGGTGAGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS TCA 72 bp GCCCTAACCCCACCATTGGCCACAGCTTATTGCACCTaGCGGGACCACCGGAACCAAGCAAGGTCTGCAGAG +
Preference number: 6 (lower is better)
Translates to: ALTPPLATAYCT*RDHRNQARSAE
Trigger: CTCTGCAGACCTTGCTTGGTTCCGGTGGTCCCGTCAGGTGCAATAAGCTGTGGCCAATGGTGGGGTTAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS CCA 72 bp AGATGCAGACGTGGGACCCTGGAGACCTGGACATTCTaGGCCCTGAGGTCCTCCCAGGTCTTGTTCTATCCC +
Preference number: 6 (lower is better)
Translates to: RCRRGTLETWTF*ALRSSQVLFYP
Trigger: GGGATAGAACAAGACCTGGGAGGACCTCAGGGCCCAGAATGTCCAGGTCTCCAGGGTCCCACGTCTGCATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS CCA 72 bp CACACACAAAGATGCAGACGTGGGACCCTGGAGACCTaGACATTCTGGGCCCTGAGGTCCTCCCAGGTCTTG +
Preference number: 6 (lower is better)
Translates to: HTQRCRRGTLET*TFWALRSSQVL
Trigger: CAAGACCTGGGAGGACCTCAGGGCCCAGAATGTCCAGGTCTCCAGGGTCCCACGTCTGCATCTTTGTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS CCA 72 bp GGCCTCACCAAGGCCCACAACACGGACCCACCGCCATaGCCACGTATGTTCCCTAAACACACATCGCTCCTA +
Preference number: 6 (lower is better)
Translates to: GLTKAHNTDPPP*PRMFPKHTSLL
Trigger: TAGGAGCGATGTGTGTTTAGGGAACATACGTGGCCATGGCGGTGGGTCCGTGTTGTGGGCCTTGGTGAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471567.1
CDS CAA 90 bp GCCCTGTGTCATCACTGCCCTAACCCCACCATTGGCCACAGCTTATaGCACCTGACGGGACCACCGGAACCAAGCAAGGTCTGCAGAGAA +
Preference number: 6 (lower is better)
Translates to: ALCHHCPNPTIGHSL*HLTGPPEPSKVCRE
Trigger: TTCTCTGCAGACCTTGCTTGGTTCCGGTGGTCCCGTCAGGTGCAATAAGCTGTGGCCAATGGTGGGGTTAGGGCAGTGATGACACAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS CCA 72 bp CGTACCATCTCCTCAGATGCCAGCCCGTGCCCTCACTaGGCCCAGTCTCAGCTGCCTTCTTTTTGCTACCAT +
Preference number: 6 (lower is better)
Translates to: RTISSDASPCPH*AQSQLPSFCYH
Trigger: ATGGTAGCAAAAAGAAGGCAGCTGAGACTGGGCCCAGTGAGGGCACGGGCTGGCATCTGAGGAGATGGTACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS CAA 72 bp GCCCTTCTTGTTCTGGGGATCCAGAGCAAGAAGAACTaGCCTGACCCAGGCAGTGAATGCCCCCTGCCTCAC +
Preference number: 6 (lower is better)
Translates to: ALLVLGIQSKKN*PDPGSECPLPH
Trigger: GTGAGGCAGGGGGCATTCACTGCCTGGGTCAGGCAAGTTCTTCTTGCTCTGGATCCCCAGAACAAGAAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS CAA 72 bp CATCACTGCCCTAACCCCACCATTGGCCACAGCTTATaGCACCTGACGGGACCACCGGAACCAAGCAAGGTC +
Preference number: 6 (lower is better)
Translates to: HHCPNPTIGHSL*HLTGPPEPSKV
Trigger: GACCTTGCTTGGTTCCGGTGGTCCCGTCAGGTGCAATAAGCTGTGGCCAATGGTGGGGTTAGGGCAGTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS CAA 90 bp ACCCTGGAGACCTGGACATTCTGGGCCCTGAGGTCCTCCCAGGTCTaGTTCTATCCCCAGAAGGATGTTCTGCCCTTCTTGTTCTGGGGA +
Preference number: 6 (lower is better)
Translates to: TLETWTFWALRSSQV*FYPQKDVLPFLFWG
Trigger: TCCCCAGAACAAGAAGGGCAGAACATCCTTCTGGGGATAGAACAAGACCTGGGAGGACCTCAGGGCCCAGAATGTCCAGGTCTCCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS GCA 72 bp CCCTTCTTGTTCTGGGGATCCAGAGCAAGAAGAACTTaGCTGACCCAGGCAGTGAATGCCCCCTGCCTCACT +
Preference number: 6 (lower is better)
Translates to: PFLFWGSRARRT*LTQAVNAPCLT
Trigger: AGTGAGGCAGGGGGCATTCACTGCCTGGGTCAGGCAAGTTCTTCTTGCTCTGGATCCCCAGAACAAGAAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS GCA 72 bp CAGGCACCACTTGAAGCACCTGCCCTGTGTCATCACTaGCCTAACCCCACCATTGGCCACAGCTTATTGCAC +
Preference number: 6 (lower is better)
Translates to: QAPLEAPALCHH*PNPTIGHSLLH
Trigger: GTGCAATAAGCTGTGGCCAATGGTGGGGTTAGGGCAGTGATGACACAGGGCAGGTGCTTCAAGTGGTGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS GCA 72 bp ATGCCAGCCCGTGCCCTCACTGGGCCCAGTCTCAGCTaGCTTCTTTTTGCTACCATTTTGAGAGCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: MPARALTGPSLS*LLFATILRAPP
Trigger: AGGAGGAGCTCTCAAAATGGTAGCAAAAAGAAGGCAGCTGAGACTGGGCCCAGTGAGGGCACGGGCTGGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS CAA 72 bp CCCTCCCACAGCTACCACCTCATTGGCTGTGTCTGGTaGTGTGGTCTCTTCTTCTGGCAGCTCGAAGTCTCC +
Preference number: 6 (lower is better)
Translates to: PSHSYHLIGCVW*CGLFFWQLEVS
Trigger: GGAGACTTCGAGCTGCCAGAAGAAGAGACCACACAACCAGACACAGCCAATGAGGTGGTAGCTGTGGGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS GCA 72 bp TGCCCTCACTGGGCCCAGTCTCAGCTGCCTTCTTTTTaGTACCATTTTGAGAGCTCCTCCTCTGTGCCAGAC +
Preference number: 6 (lower is better)
Translates to: CPHWAQSQLPSF*YHFESSSSVPD
Trigger: GTCTGGCACAGAGGAGGAGCTCTCAAAATGGTAGCAAAAAGAAGGCAGCTGAGACTGGGCCCAGTGAGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS CCA 72 bp CCACAGCTACCACCTCATTGGCTGTGTCTGGTTGTGTaGTCTCTTCTTCTGGCAGCTCGAAGTCTCCACTGG +
Preference number: 6 (lower is better)
Translates to: PQLPPHWLCLVV*SLLLAARSLHW
Trigger: CCAGTGGAGACTTCGAGCTGCCAGAAGAAGAGACCACACAACCAGACACAGCCAATGAGGTGGTAGCTGTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336798.11
ENST00000339394.7
CDS CAA 72 bp ACCTGGACATTCTGGGCCCTGAGGTCCTCCCAGGTCTaGTTCTATCCCCAGAAGGATGTTCTGCCCTTCTTG +
Preference number: 6 (lower is better)
Translates to: TWTFWALRSSQV*FYPQKDVLPFL
Trigger: CAAGAAGGGCAGAACATCCTTCTGGGGATAGAACAAGACCTGGGAGGACCTCAGGGCCCAGAATGTCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS TCA 72 bp TGCTTGAGCAATCTGGCTGACGCAAAGCCGGGACAGTaGAGGAACTTGGGAGGAAATGAGATGGGGAGTAGG +
Preference number: 6 (lower is better)
Translates to: CLSNLADAKPGQ*RNLGGNEMGSR
Trigger: CCTACTCCCCATCTCATTTCCTCCCAAGTTCCTTCACTGTCCCGGCTTTGCGTCAGCCAGATTGCTCAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS CAA 90 bp TCCTCCCAGGTCTTGTTCTATCCCCAGAAGGATGTTCTGCCCTTCTaGTTCTGGGGATCCAGAGCAAGAAGAACTTGCCTGACCCAGGCA +
Preference number: 6 (lower is better)
Translates to: SSQVLFYPQKDVLPF*FWGSRARRTCLTQA
Trigger: TGCCTGGGTCAGGCAAGTTCTTCTTGCTCTGGATCCCCAGAACAAGAAGGGCAGAACATCCTTCTGGGGATAGAACAAGACCTGGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336798.11
CDS CCA 72 bp TTCTATCCCCAGAAGGATGTTCTGCCCTTCTTGTTCTaGGGATCCAGAGCAAGAAGAACTTGCCTGACCCAG +
Preference number: 6 (lower is better)
Translates to: FYPQKDVLPFLF*GSRARRTCLTQ
Trigger: CTGGGTCAGGCAAGTTCTTCTTGCTCTGGATCCCCAGAACAAGAAGGGCAGAACATCCTTCTGGGGATAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336798.11