Pregenerated sensors for SCNM1 (Homo sapiens)
Ensembl gene IDs: ENSG00000163156Ensembl transcript IDs: ENST00000368902.1, ENST00000368905.9, ENST00000459799.1, ENST00000461862.5, ENST00000471039.1, ENST00000497147.1, ENST00000602841.5
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGGTTACTAGGAGGAGGTGGGGGTGTTCCCTCCCTTGGTGTTCCCCATAACCCTCCCTGTTTCCAGATGTaGCCAGGTCCCCCTAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: RLLGGGGGVPSLGVPHNPPCFQM*PGPPSA Trigger: GGCACTAGGGGGACCTGGCCACATCTGGAAACAGGG...AGGGTTATGGGGAACACCAAGGGAGGGAACACCCCCACCTCCTCCTAGTAACCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| 3UTR-3UTR CCA 90 bp | GGGTTACTGCCAGTTCACCAGGGGATTATTTATACTCTGGGGATCAGCAGGCAGGTTACTAGGAGGAGGTaGGGGTGTTCCCTCCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: GLLPVHQGIIYTLGISRQVTRRR*GCSLPW Trigger: CCAAGGGAGGGAACACCCCCACCTCCTCCTAGTAAC...CTGCCTGCTGATCCCCAGAGTATAAATAATCCCCTGGTGAACTGGCAGTAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGGGATTATTTATACTCTGGGGATCAGCAGGCAGGGAGGTTCAGGTTACTGAGGGGTTAGAAGTATaGATAGCCGTGGCTGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: TRGLFILWGSAGREVQVTEGLEV*IAVAGC Trigger: GCACCCAGCCACGGCTATCCATACTTCTAACCCCTC...AGTAACCTGAACCTCCCTGCCTGCTGATCCCCAGAGTATAAATAATCCCCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| 3UTR-3UTR CCA 90 bp | GGGACTGGAAAGGAGAAGAGTGCCTTTGCAGAAAGCAGGAGCTGGAACAAACACTCCTTCCTTGGGCTTTaGGGTGAGAATCTTGGCGCT | + |
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Preference number: 2 (lower is better) Translates to: GTGKEKSAFAESRSWNKHSFLGL*GENLGA Trigger: AGCGCCAAGATTCTCACCCCAAAGCCCAAGGAAGGA...GTGTTTGTTCCAGCTCCTGCTTTCTGCAAAGGCACTCTTCTCCTTTCCAGTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| 3UTR-3UTR TCA 90 bp | GGGACTGGAAAGGAGAAGAGTGCCTTTGCAGAAAGCAGGAGCTGGAACAAACACCCTGCAGTCCTTATGTaGTTTGAAGGGGGAAAGGAC | + |
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Preference number: 2 (lower is better) Translates to: GTGKEKSAFAESRSWNKHPAVLM*FEGGKD Trigger: GTCCTTTCCCCCTTCAAATCACATAAGGACTGCAGG...GTGTTTGTTCCAGCTCCTGCTTTCTGCAAAGGCACTCTTCTCCTTTCCAGTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| 3UTR-3UTR GCA 90 bp | GGGACTGGAAAGGAGAAGAGTGCCTTTGCAGAAAGCAGGAGCTGGAACAAACACGAGAGCTGTGTACCTTaGAGGCAAGGAGTAGTTGGA | + |
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Preference number: 2 (lower is better) Translates to: GTGKEKSAFAESRSWNKHESCVP*RQGVVG Trigger: TCCAACTACTCCTTGCCTGCAAGGTACACAGCTCTC...GTGTTTGTTCCAGCTCCTGCTTTCTGCAAAGGCACTCTTCTCCTTTCCAGTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| 3UTR-3UTR TCA 90 bp | TTAATGTGGGATGGGCCTGTAAGGTGGCCTAAGACACTACCAATTTATGAGTTTACAGATCTGAAATCCTaGGATCCAACAAGGAACCAG | + |
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Preference number: 2 (lower is better) Translates to: LMWDGPVRWPKTLPIYEFTDLKS*DPTRNQ Trigger: CTGGTTCCTTGTTGGATCTCAGGATTTCAGATCTGT...AAACTCATAAATTGGTAGTGTCTTAGGCCACCTTACAGGCCCATCCCACATTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| 3UTR CAA 90 bp | GCCTTTGCAGAAAGCAGGAGCTGGAACAAACACTTATGTTTAATATaGCTCCTTTACAGGTCGCCAGCAAAAGAAGAGATAACACTGCAT | + |
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Preference number: 2 (lower is better) Translates to: AFAESRSWNKHLCLI*LLYRSPAKEEITLH Trigger: ATGCAGTGTTATCTCTTCTTTTGCTGGCGACCTGTAAAGGAGCAATATTAAACATAAGTGTTTGTTCCAGCTCCTGCTTTCTGCAAAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| 3UTR-3UTR CAA 90 bp | CAGCAGGCAGGGAGGTTCAGGTTACTAGGAGGAGGTGGGGGTGTTCCCTCCCTTAAGGGGGAAAGGACTTaGAGTGGTAGTGGAGAAGCA | + |
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Preference number: 3 (lower is better) Translates to: QQAGRFRLLGGGGGVPSLKGERT*SGSGEA Trigger: TGCTTCTCCACTACCACTCAAAGTCCTTTCCCCCTT...AAGGGAGGGAACACCCCCACCTCCTCCTAGTAACCTGAACCTCCCTGCCTGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| 3UTR-3UTR CAA 90 bp | CACCAGGGGATTATTTATACTCTGGGGATCAGCAGGCAGGGAGGTTCAGGTTACGGAGAGCTGTGTACCTaGCAGGCAAGGAGTAGTTGG | + |
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Preference number: 3 (lower is better) Translates to: HQGIIYTLGISRQGGSGYGELCT*QARSSW Trigger: CCAACTACTCCTTGCCTGCAAGGTACACAGCTCTCC...GTAACCTGAACCTCCCTGCCTGCTGATCCCCAGAGTATAAATAATCCCCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| 3UTR CCA 72 bp | CTTCTATCCATTTTGCCTGCCTCCTTCCTTGGGCTTTaGGGTGAGAATCTTGGCGCTAACCCCCAAGGGTTA | + |
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Preference number: 3 (lower is better) Translates to: LLSILPASFLGL*GENLGANPQGL Trigger: TAACCCTTGGGGGTTAGCGCCAAGATTCTCACCCCAAAGCCCAAGGAAGGAGGCAGGCAAAATGGATAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| 3UTR CCA 72 bp | GGTTACTGCCAGTTCACCAGGGGATTATTTATACTCTaGGGATCAGCAGGCAGGGAGGTTCAGGTTACTAGG | + |
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Preference number: 3 (lower is better) Translates to: GYCQFTRGLFIL*GSAGREVQVTR Trigger: CCTAGTAACCTGAACCTCCCTGCCTGCTGATCCCCAGAGTATAAATAATCCCCTGGTGAACTGGCAGTAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| 3UTR-3UTR CAA 90 bp | CTAAGACACTACCAATTTATGAGTTTGGCTAAGGGACTGGAAAGGAGAAGAGTGGGGGTGTTCCCTCCCTaGGTGTTCCCCATAACCCTG | + |
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Preference number: 3 (lower is better) Translates to: LRHYQFMSLAKGLERRRVGVFPP*VFPITL Trigger: CAGGGTTATGGGGAACACCAAGGGAGGGAACACCCC...CACTCTTCTCCTTTCCAGTCCCTTAGCCAAACTCATAAATTGGTAGTGTCTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| 3UTR-3UTR CAA 90 bp | CTAAGACACTACCAATTTATGAGTTTGGCTAAGGGACTGGAAAGGAGAAGAGTGTGCCTGCCTCCTTCCTaGGGCTTTGGGGTGAGAATC | + |
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Preference number: 3 (lower is better) Translates to: LRHYQFMSLAKGLERRRVCLPPS*GFGVRI Trigger: GATTCTCACCCCAAAGCCCAAGGAAGGAGGCAGGCA...CACTCTTCTCCTTTCCAGTCCCTTAGCCAAACTCATAAATTGGTAGTGTCTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| 3UTR-3UTR CAA 90 bp | CACCAGGGGATTATTTATACTCTGGGGATCAGCAGGCAGGGAGGTTCAGGTTACGGCAAAGACCTCTTTTaGACAGTCTTATTAATAGGG | + |
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Preference number: 3 (lower is better) Translates to: HQGIIYTLGISRQGGSGYGKDLF*TVLLIG Trigger: CCCTATTAATAAGACTGTCAAAAAGAGGTCTTTGCC...GTAACCTGAACCTCCCTGCCTGCTGATCCCCAGAGTATAAATAATCCCCTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| 3UTR-3UTR CAA 90 bp | CTAAGACACTACCAATTTATGAGTTTGGCTAAGGGACTGGAAAGGAGAAGAGTGCAGTCCTTATGTGATTaGAAGGGGGAAAGGACTTTG | + |
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Preference number: 3 (lower is better) Translates to: LRHYQFMSLAKGLERRRVQSLCD*KGERTL Trigger: CAAAGTCCTTTCCCCCTTCAAATCACATAAGGACTG...CACTCTTCTCCTTTCCAGTCCCTTAGCCAAACTCATAAATTGGTAGTGTCTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR GCA 90 bp | CAGCAGGCAGGGAGGTTCAGGTTACTAGGAGGAGGTGGGGGTGTTCCCTCCCTTCCCTTCTATCCATTTTaGCTGCCTCCTTCCTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: QQAGRFRLLGGGGGVPSLPFYPF*LPPSLG Trigger: GCCCAAGGAAGGAGGCAGGCAAAATGGATAGAAGGG...AAGGGAGGGAACACCCCCACCTCCTCCTAGTAACCTGAACCTCCCTGCCTGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| 3UTR CAA 72 bp | TGCCTGCCTCCTTCCTTGGGCTTTGGGGTGAGAATCTaGGCGCTAACCCCCAAGGGTTACTGCCAGTTCACC | + |
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Preference number: 4 (lower is better) Translates to: CLPPSLGFGVRI*ALTPKGYCQFT Trigger: GGTGAACTGGCAGTAACCCTTGGGGGTTAGCGCCAAGATTCTCACCCCAAAGCCCAAGGAAGGAGGCAGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CCA 90 bp | GAGAATCTTGGCGCTAACCCCCAAGGGTTACTGCCAGTTCACCAGGGGATTATTGGTGGGCAGTCAGCATaGCCAGGGTGTCCAGTACCG | + |
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Preference number: 4 (lower is better) Translates to: ENLGANPQGLLPVHQGIIGGQSA*PGCPVP Trigger: CGGTACTGGACACCCTGGCCATGCTGACTGCCCACC...AATAATCCCCTGGTGAACTGGCAGTAACCCTTGGGGGTTAGCGCCAAGATTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CCA 90 bp | GGGTTACTGCCAGTTCACCAGGGGATTATTTATACTCTGGGGATCAGCAGGCAGGGGCTCGTCTTCTTGTaGGGCTCATGGGTGCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: GLLPVHQGIIYTLGISRQGLVFL*GSWVQG Trigger: CCCCTGCACCCATGAGCCCCACAAGAAGACGAGCCC...CTGCCTGCTGATCCCCAGAGTATAAATAATCCCCTGGTGAACTGGCAGTAACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CCA 90 bp | CACCAGGGGATTATTTATACTCTGGGGATCAGCAGGCAGGGAGGTTCAGGTTACTTCTTGCCTGCACGGTaGGCAGTCAGCATGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: HQGIIYTLGISRQGGSGYFLPAR*AVSMAR Trigger: CCTGGCCATGCTGACTGCCCACCGTGCAGGCAAGAA...GTAACCTGAACCTCCCTGCCTGCTGATCCCCAGAGTATAAATAATCCCCTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CCA 90 bp | AGGTTACTAGGAGGAGGTGGGGGTGTTCCCTCCCTTGGTGTTCCCCATAACCCTTCCTTCCTTGGGCTTTaGGGTGAGAATCTTGGCGCT | + |
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Preference number: 4 (lower is better) Translates to: RLLGGGGGVPSLGVPHNPSFLGL*GENLGA Trigger: AGCGCCAAGATTCTCACCCCAAAGCCCAAGGAAGGA...AGGGTTATGGGGAACACCAAGGGAGGGAACACCCCCACCTCCTCCTAGTAACCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CCA 90 bp | GGATTATTTATACTCTGGGGATCAGCAGGCAGGGAGGTTCAGGTTACTAGGAGGCCCTGTTTCCAGATGTaGCCAGGTCCCCCTAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: GLFILWGSAGREVQVTRRPCFQM*PGPPSA Trigger: GGCACTAGGGGGACCTGGCCACATCTGGAAACAGGG...CCTCCTAGTAACCTGAACCTCCCTGCCTGCTGATCCCCAGAGTATAAATAATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CCA 90 bp | CACCAGGGGATTATTTATACTCTGGGGATCAGCAGGCAGGGAGGTTCAGGTTACGTTACTAGGAGGAGGTaGGGGTGTTCCCTCCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: HQGIIYTLGISRQGGSGYVTRRR*GCSLPW Trigger: CCAAGGGAGGGAACACCCCCACCTCCTCCTAGTAAC...GTAACCTGAACCTCCCTGCCTGCTGATCCCCAGAGTATAAATAATCCCCTGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CCA 90 bp | CACCAGGGGATTATTTATACTCTGGGGATCAGCAGGCAGGGAGGTTCAGGTTACTCGACCTCGTCCATCTaGGATCCATCCAGAGCTTCG | + |
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Preference number: 4 (lower is better) Translates to: HQGIIYTLGISRQGGSGYSTSSI*DPSRAS Trigger: CGAAGCTCTGGATGGATCCCAGATGGACGAGGTCGA...GTAACCTGAACCTCCCTGCCTGCTGATCCCCAGAGTATAAATAATCCCCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CCA 90 bp | GGGTTACTGCCAGTTCACCAGGGGATTATTTATACTCTGGGGATCAGCAGGCAGGAGGGGTTAGAAGTATaGATAGCCGTGGCTGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: GLLPVHQGIIYTLGISRQEGLEV*IAVAGC Trigger: GCACCCAGCCACGGCTATCCATACTTCTAACCCCTC...CTGCCTGCTGATCCCCAGAGTATAAATAATCCCCTGGTGAACTGGCAGTAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR TCA 90 bp | GAGAATCTTGGCGCTAACCCCCAAGGGTTACTGCCAGTTCACCAGGGGATTATTTTGGAGTTTGACCTCTaGGGGTGGCATAGGGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: ENLGANPQGLLPVHQGIILEFDL*GWHRGK Trigger: CTTTCCCCTATGCCACCCTCAGAGGTCAAACTCCAA...AATAATCCCCTGGTGAACTGGCAGTAACCCTTGGGGGTTAGCGCCAAGATTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR GCA 90 bp | TGGCTAAGGGACTGGAAAGGAGAAGAGTGCCTTTGCAGAAAGCAGGAGCTGGAACAGATGTTTCTTGCCTaGACGGTGGGCAGTCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: WLRDWKGEECLCRKQELEQMFLA*TVGSQH Trigger: ATGCTGACTGCCCACCGTGCAGGCAAGAAACATCTG...TTCCAGCTCCTGCTTTCTGCAAAGGCACTCTTCTCCTTTCCAGTCCCTTAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CCA 90 bp | ACCAGGGGATTATTTATACTCTGGGGATCAGCAGGCAGGGAGGTTCAGGTTACTGTCGATGGGGGCAGATaGCACAAGCAAAGCGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: TRGLFILWGSAGREVQVTVDGGR*HKQSVH Trigger: ATGGACGCTTTGCTTGTGCCATCTGCCCCCATCGAC...AGTAACCTGAACCTCCCTGCCTGCTGATCCCCAGAGTATAAATAATCCCCTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR GCA 90 bp | GAGAATCTTGGCGCTAACCCCCAAGGGTTACTGCCAGTTCACCAGGGGATTATTGAGAGCTGTGTACCTTaGAGGCAAGGAGTAGTTGGA | + |
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Preference number: 4 (lower is better) Translates to: ENLGANPQGLLPVHQGIIESCVP*RQGVVG Trigger: TCCAACTACTCCTTGCCTGCAAGGTACACAGCTCTC...AATAATCCCCTGGTGAACTGGCAGTAACCCTTGGGGGTTAGCGCCAAGATTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CCA 90 bp | ACCAGGGGATTATTTATACTCTGGGGATCAGCAGGCAGGGAGGTTCAGGTTACTCAAGGGGAGATCAGGTaGTTCCTCCTCATCAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: TRGLFILWGSAGREVQVTQGEIR*FLLIRV Trigger: GACTCTGATGAGGAGGAACCACCTGATCTCCCCTTG...AGTAACCTGAACCTCCCTGCCTGCTGATCCCCAGAGTATAAATAATCCCCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CCA 90 bp | AGGTTACTAGGAGGAGGTGGGGGTGTTCCCTCCCTTGGTGTTCCCCATAACCCTTTTGTTTTGTTAATGTaGGATGGGCCTGTAAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: RLLGGGGGVPSLGVPHNPFVLLM*DGPVRW Trigger: CCACCTTACAGGCCCATCCCACATTAACAAAACAAA...AGGGTTATGGGGAACACCAAGGGAGGGAACACCCCCACCTCCTCCTAGTAACCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR TCA 90 bp | TTATTAATAGGGCACCAGGCTGATGCAGCTGACGCTTGGCATGGCTTTGGTAGGTTGAGCACATTGAGTTaGCTCCAATCGTCTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: LLIGHQADAADAWHGFGRLSTLS*LQSSPS Trigger: GGAAGGAGACGATTGGAGTCAACTCAATGTGCTCAA...CCTACCAAAGCCATGCCAAGCGTCAGCTGCATCAGCCTGGTGCCCTATTAATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR GCA 90 bp | GACCTCTTTTTGACAGTCTTATTAATAGGGCACCAGGCTGATGCAGCTGACGCTTGGACAGATGTTTCTTaGCTGCACGGTGGGCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: DLFLTVLLIGHQADAADAWTDVS*LHGGQS Trigger: TGACTGCCCACCGTGCAGGCAAGAAACATCTGTCCA...AGCGTCAGCTGCATCAGCCTGGTGCCCTATTAATAAGACTGTCAAAAAGAGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR GCA 90 bp | GGGTTACTGCCAGTTCACCAGGGGATTATTTATACTCTGGGGATCAGCAGGCAGTCTATCCATTTTGCCTaGCTCCTTCCTTGGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: GLLPVHQGIIYTLGISRQSIHFA*LLPWAL Trigger: CAAAGCCCAAGGAAGGAGGCAGGCAAAATGGATAGA...CTGCCTGCTGATCCCCAGAGTATAAATAATCCCCTGGTGAACTGGCAGTAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CCA 90 bp | GGTGGCCTAAGACACTACCAATTTATGAGTTTGGCTAAGGGACTGGAAAGGAGACCTCTGGAATGTAACTaGCTAGGAGGTCCCCGACTC | + |
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Preference number: 4 (lower is better) Translates to: GGLRHYQFMSLAKGLERRPLECN*LGGPRL Trigger: GAGTCGGGGACCTCCTAGCCAGTTACATTCCAGAGG...TCTCCTTTCCAGTCCCTTAGCCAAACTCATAAATTGGTAGTGTCTTAGGCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CCA 90 bp | GGGTTACTGCCAGTTCACCAGGGGATTATTTATACTCTGGGGATCAGCAGGCAGGATGGGCCTGTAAGGTaGCCTAAGACACTACCAATT | + |
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Preference number: 4 (lower is better) Translates to: GLLPVHQGIIYTLGISRQDGPVR*PKTLPI Trigger: AATTGGTAGTGTCTTAGGCCACCTTACAGGCCCATC...CTGCCTGCTGATCCCCAGAGTATAAATAATCCCCTGGTGAACTGGCAGTAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR TCA 90 bp | ACCAGGGGATTATTTATACTCTGGGGATCAGCAGGCAGGGAGGTTCAGGTTACTGTTCAGGTTCCCTACTaGTCTTCCCACTTTGGAGTT | + |
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Preference number: 4 (lower is better) Translates to: TRGLFILWGSAGREVQVTVQVPY*SSHFGV Trigger: AACTCCAAAGTGGGAAGATCAGTAGGGAACCTGAAC...AGTAACCTGAACCTCCCTGCCTGCTGATCCCCAGAGTATAAATAATCCCCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR GCA 90 bp | TACCTGCAGTCCTTATGTGATTTGAAGGGGGAAAGGACTTTGAGTGGTAGTGGAACCCCCAAGGGTTACTaGCAGTTCACCAGGGGATTA | + |
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Preference number: 4 (lower is better) Translates to: YLQSLCDLKGERTLSGSGTPKGY*QFTRGL Trigger: TAATCCCCTGGTGAACTGGCAGTAACCCTTGGGGGT...TCCACTACCACTCAAAGTCCTTTCCCCCTTCAAATCACATAAGGACTGCAGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CCA 90 bp | CTAAGACACTACCAATTTATGAGTTTGGCTAAGGGACTGGAAAGGAGAAGAGTGTCCAGTACCGGTCGATaGGGGCAGATGGCACAAGCA | + |
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Preference number: 4 (lower is better) Translates to: LRHYQFMSLAKGLERRRVSSTGR*GQMAQA Trigger: TGCTTGTGCCATCTGCCCCCATCGACCGGTACTGGA...CACTCTTCTCCTTTCCAGTCCCTTAGCCAAACTCATAAATTGGTAGTGTCTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CCA 90 bp | CTAAGACACTACCAATTTATGAGTTTGGCTAAGGGACTGGAAAGGAGAAGAGTGTTCTTGTGGGGCTCATaGGTGCAGGGGCTGAGACAG | + |
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Preference number: 4 (lower is better) Translates to: LRHYQFMSLAKGLERRRVFLWGS*VQGLRQ Trigger: CTGTCTCAGCCCCTGCACCCATGAGCCCCACAAGAA...CACTCTTCTCCTTTCCAGTCCCTTAGCCAAACTCATAAATTGGTAGTGTCTTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR TCA 90 bp | TACCTGCAGTCCTTATGTGATTTGAAGGGGGAAAGGACTTTGAGTGGTAGTGGACCTGCAGTCCTTATGTaGTTTGAAGGGGGAAAGGAC | + |
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Preference number: 4 (lower is better) Translates to: YLQSLCDLKGERTLSGSGPAVLM*FEGGKD Trigger: GTCCTTTCCCCCTTCAAATCACATAAGGACTGCAGG...TCCACTACCACTCAAAGTCCTTTCCCCCTTCAAATCACATAAGGACTGCAGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CCA 90 bp | ACCAGGGGATTATTTATACTCTGGGGATCAGCAGGCAGGGAGGTTCAGGTTACTAGAAAAGCTGCAAGCTaGACAGATGTTTCTTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: TRGLFILWGSAGREVQVTRKAAS*TDVSCL Trigger: CAGGCAAGAAACATCTGTCCAGCTTGCAGCTTTTCT...AGTAACCTGAACCTCCCTGCCTGCTGATCCCCAGAGTATAAATAATCCCCTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CCA 90 bp | TGTGTACCTTGCAGGCAAGGAGTAGTTGGAATGAGAATGAACAGATCTGAAATCGATGCAGCTGACGCTTaGCATGGCTTTGGTAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: CVPCRQGVVGMRMNRSEIDAADA*HGFGRR Trigger: CCTCCTACCAAAGCCATGCCAAGCGTCAGCTGCATC...GATTTCAGATCTGTTCATTCTCATTCCAACTACTCCTTGCCTGCAAGGTACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR TCA 90 bp | CCCATAACCCTGCCAATGCCTTTTGACTCTTCTACTTTCACAGGGAACTTAGCCGACACTACCAATTTATaGGTTTGGCTAAGGGACTGG | + |
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Preference number: 4 (lower is better) Translates to: PITLPMPFDSSTFTGNLADTTNL*VWLRDW Trigger: CCAGTCCCTTAGCCAAACTCATAAATTGGTAGTGTC...GGCTAAGTTCCCTGTGAAAGTAGAAGAGTCAAAAGGCATTGGCAGGGTTATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| 3UTR CAA 72 bp | CTGCAGTCCTTATGTGATTTGAAGGGGGAAAGGACTTaGAGTGGTAGTGGAGAAGCAGGCAGACAACATGAA | + |
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Preference number: 4 (lower is better) Translates to: LQSLCDLKGERT*SGSGEAGRQHE Trigger: TTCATGTTGTCTGCCTGCTTCTCCACTACCACTCAAAGTCCTTTCCCCCTTCAAATCACATAAGGACTGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR TCA 90 bp | TTAATGTGGGATGGGCCTGTAAGGTGGCCTAAGACACTACCAATTTATGAGTTTGTGATAAGTCGTGTCTaGGTTAGCAGAGGAGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: LMWDGPVRWPKTLPIYEFVISRV*VSRGAS Trigger: TGAGGCTCCTCTGCTAACTCAGACACGACTTATCAC...AAACTCATAAATTGGTAGTGTCTTAGGCCACCTTACAGGCCCATCCCACATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR TCA 90 bp | GGTGGCCTAAGACACTACCAATTTATGAGTTTGGCTAAGGGACTGGAAAGGAGAACAGATCTGAAATCCTaGGATCCAACAAGGAACCAG | + |
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Preference number: 4 (lower is better) Translates to: GGLRHYQFMSLAKGLERRTDLKS*DPTRNQ Trigger: CTGGTTCCTTGTTGGATCTCAGGATTTCAGATCTGT...TCTCCTTTCCAGTCCCTTAGCCAAACTCATAAATTGGTAGTGTCTTAGGCCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| 3UTR CAA 72 bp | AGTTTGGCTAAGGGACTGGAAAGGAGAAGAGTGCCTTaGCAGAAAGCAGGAGCTGGAACAAACACTTATGTT | + |
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Preference number: 4 (lower is better) Translates to: SLAKGLERRRVP*QKAGAGTNTYV Trigger: AACATAAGTGTTTGTTCCAGCTCCTGCTTTCTGCAAAGGCACTCTTCTCCTTTCCAGTCCCTTAGCCAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR TCA 90 bp | TTAATGTGGGATGGGCCTGTAAGGTGGCCTAAGACACTACCAATTTATGAGTTTAGCAGGCAGACAACATaGAGGGCAAAGACCTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: LMWDGPVRWPKTLPIYEFSRQTT*RAKTSF Trigger: AAAAGAGGTCTTTGCCCTTCATGTTGTCTGCCTGCT...AAACTCATAAATTGGTAGTGTCTTAGGCCACCTTACAGGCCCATCCCACATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CCA 90 bp | CAATTTATGAGTTTGGCTAAGGGACTGGAAAGGAGAAGAGTGCCTTTGCAGAAACTGATCTTCCCACTTTaGAGTTTGACCTCTGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: QFMSLAKGLERRRVPLQKLIFPL*SLTSEG Trigger: ACCCTCAGAGGTCAAACTCCAAAGTGGGAAGATCAG...TTTCTGCAAAGGCACTCTTCTCCTTTCCAGTCCCTTAGCCAAACTCATAAATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CCA 90 bp | TTATTAATAGGGCACCAGGCTGATGCAGCTGACGCTTGGCATGGCTTTGGTAGGTTATTTGTGAATGAATaGGAAAAGGGTATCAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LLIGHQADAADAWHGFGRLFVNE*EKGISP Trigger: TGGACTGATACCCTTTTCCCATTCATTCACAAATAA...CCTACCAAAGCCATGCCAAGCGTCAGCTGCATCAGCCTGGTGCCCTATTAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS CCA 90 bp | GCACGGTGGGCAGTCAGCATGGCCAGGGTGTCCAGTACCGGTCGATaGGGGCAGATGGCACAAGCAAAGCGTCCATCCCGAAGCATCAGC | + |
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Preference number: 5 (lower is better) Translates to: ARWAVSMARVSSTGR*GQMAQAKRPSRSIS Trigger: GCTGATGCTTCGGGATGGACGCTTTGCTTGTGCCATCTGCCCCCATCGACCGGTACTGGACACCCTGGCCATGCTGACTGCCCACCGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000368902.1 ENST00000368905.9 ENST00000461862.5 ENST00000602841.5 |
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| CDS CCA 90 bp | GCACGGTGGGCAGTCAGCATGGCCAGGGTGTCCAGTACCGGTCGATaGGGGCAGATGGCACAAGCAAAGCTGAGCAGGGGTAGAGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: ARWAVSMARVSSTGR*GQMAQAKLSRGREE Trigger: CTCTTCTCTACCCCTGCTCAGCTTTGCTTGTGCCATCTGCCCCCATCGACCGGTACTGGACACCCTGGCCATGCTGACTGCCCACCGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000497147.1 |
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| CDS CCA 90 bp | GCAAGCTGGACAGATGTTTCTTGCCTGCACGGTGGGCAGTCAGCATaGCCAGGGTGTCCAGTACCGGTCGATGGGGGCAGATGGCACAAG | + |
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Preference number: 5 (lower is better) Translates to: ASWTDVSCLHGGQSA*PGCPVPVDGGRWHK Trigger: CTTGTGCCATCTGCCCCCATCGACCGGTACTGGACACCCTGGCCATGCTGACTGCCCACCGTGCAGGCAAGAAACATCTGTCCAGCTTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000368902.1 ENST00000368905.9 ENST00000461862.5 ENST00000497147.1 ENST00000602841.5 |
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| CDS-3UTR CAA 90 bp | AGGTTACTAGGAGGAGGTGGGGGTGTTCCCTCCCTTGGTGTTCCCCATAACCCTCAGGGGCTGAGACAGTaGCTGACTCCTCGGCCTGTG | + |
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Preference number: 5 (lower is better) Translates to: RLLGGGGGVPSLGVPHNPQGLRQ*LTPRPV Trigger: CACAGGCCGAGGAGTCAGCAACTGTCTCAGCCCCTG...AGGGTTATGGGGAACACCAAGGGAGGGAACACCCCCACCTCCTCCTAGTAACCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS GCA 90 bp | GAGAAGAGGATAAGTGGTCCAGGGGAAGAGGGTTGGGCCCGTCCCTaGCATAGGTCCCACCCTGTCCTAGCAGTCTTTGCAAAACCCAAC | + |
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Preference number: 5 (lower is better) Translates to: EKRISGPGEEGWARP*HRSHPVLAVFAKPN Trigger: GTTGGGTTTTGCAAAGACTGCTAGGACAGGGTGGGACCTATGGCAGGGACGGGCCCAACCCTCTTCCCCTGGACCACTTATCCTCTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000471039.1 ENST00000497147.1 |
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| CDS-3UTR CAA 90 bp | AGGTTACTAGGAGGAGGTGGGGGTGTTCCCTCCCTTGGTGTTCCCCATAACCCTTTTGGGGTGAGAATCTaGGCGCTAACCCCCAAGGGT | + |
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Preference number: 5 (lower is better) Translates to: RLLGGGGGVPSLGVPHNPFGVRI*ALTPKG Trigger: ACCCTTGGGGGTTAGCGCCAAGATTCTCACCCCAAA...AGGGTTATGGGGAACACCAAGGGAGGGAACACCCCCACCTCCTCCTAGTAACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CAA 90 bp | GAGAATCTTGGCGCTAACCCCCAAGGGTTACTGCCAGTTCACCAGGGGATTATTGGGGTGTTCCCTCCCTaGGTGTTCCCCATAACCCTG | + |
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Preference number: 5 (lower is better) Translates to: ENLGANPQGLLPVHQGIIGVFPP*VFPITL Trigger: CAGGGTTATGGGGAACACCAAGGGAGGGAACACCCC...AATAATCCCCTGGTGAACTGGCAGTAACCCTTGGGGGTTAGCGCCAAGATTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CAA 90 bp | AGGTTACTAGGAGGAGGTGGGGGTGTTCCCTCCCTTGGTGTTCCCCATAACCCTAGAGGAGCCTCAGCTTaGGTTTCTTCCCTTCTCAAT | + |
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Preference number: 5 (lower is better) Translates to: RLLGGGGGVPSLGVPHNPRGASA*VSSLLN Trigger: ATTGAGAAGGGAAGAAACCAAAGCTGAGGCTCCTCT...AGGGTTATGGGGAACACCAAGGGAGGGAACACCCCCACCTCCTCCTAGTAACCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CAA 90 bp | GGATTATTTATACTCTGGGGATCAGCAGGCAGGGAGGTTCAGGTTACTAGGAGGGGAGAGCTGTGTACCTaGCAGGCAAGGAGTAGTTGG | + |
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Preference number: 5 (lower is better) Translates to: GLFILWGSAGREVQVTRRGELCT*QARSSW Trigger: CCAACTACTCCTTGCCTGCAAGGTACACAGCTCTCC...CCTCCTAGTAACCTGAACCTCCCTGCCTGCTGATCCCCAGAGTATAAATAATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CAA 90 bp | CAGCAGGCAGGGAGGTTCAGGTTACTAGGAGGAGGTGGGGGTGTTCCCTCCCTTCACTTATGTTTAATATaGCTCCTTTACAGGTCGCCA | + |
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Preference number: 5 (lower is better) Translates to: QQAGRFRLLGGGGGVPSLHLCLI*LLYRSP Trigger: TGGCGACCTGTAAAGGAGCAATATTAAACATAAGTG...AAGGGAGGGAACACCCCCACCTCCTCCTAGTAACCTGAACCTCCCTGCCTGCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS TCA 90 bp | GGCTCCAGATCCTCTCCGCTCACGCTTACTTTGAGCACATTGAGTTaGCTCCAATCGTCTCCTTCCCTCTTGAAAGACATCACGACTGTG | + |
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Preference number: 5 (lower is better) Translates to: GSRSSPLTLTLSTLS*LQSSPSLLKDITTV Trigger: CACAGTCGTGATGTCTTTCAAGAGGGAAGGAGACGATTGGAGTCAACTCAATGTGCTCAAAGTAAGCGTGAGCGGAGAGGATCTGGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368902.1 |
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| CDS-3UTR CAA 90 bp | CAATTTATGAGTTTGGCTAAGGGACTGGAAAGGAGAAGAGTGCCTTTGCAGAAACCAGGGCTCGTCTTCTaGTGGGGCTCATGGGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: QFMSLAKGLERRRVPLQKPGLVF*WGSWVQ Trigger: CTGCACCCATGAGCCCCACAAGAAGACGAGCCCTGG...TTTCTGCAAAGGCACTCTTCTCCTTTCCAGTCCCTTAGCCAAACTCATAAATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CAA 90 bp | AGGTTACTAGGAGGAGGTGGGGGTGTTCCCTCCCTTGGTGTTCCCCATAACCCTGGCAAAGACCTCTTTTaGACAGTCTTATTAATAGGG | + |
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Preference number: 5 (lower is better) Translates to: RLLGGGGGVPSLGVPHNPGKDLF*TVLLIG Trigger: CCCTATTAATAAGACTGTCAAAAAGAGGTCTTTGCC...AGGGTTATGGGGAACACCAAGGGAGGGAACACCCCCACCTCCTCCTAGTAACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CAA 90 bp | TTTATACTCTGGGGATCAGCAGGCAGGGAGGTTCAGGTTACTAGGAGGAGGTGGCAGTCCTTATGTGATTaGAAGGGGGAAAGGACTTTG | + |
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Preference number: 5 (lower is better) Translates to: FILWGSAGREVQVTRRRWQSLCD*KGERTL Trigger: CAAAGTCCTTTCCCCCTTCAAATCACATAAGGACTG...CCACCTCCTCCTAGTAACCTGAACCTCCCTGCCTGCTGATCCCCAGAGTATAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CAA 90 bp | GAGAATCTTGGCGCTAACCCCCAAGGGTTACTGCCAGTTCACCAGGGGATTATTTTTGAGCACATTGAGTaGACTCCAATCGTCTCCTTC | + |
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Preference number: 5 (lower is better) Translates to: ENLGANPQGLLPVHQGIIFEHIE*TPIVSF Trigger: GAAGGAGACGATTGGAGTCAACTCAATGTGCTCAAA...AATAATCCCCTGGTGAACTGGCAGTAACCCTTGGGGGTTAGCGCCAAGATTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CAA 90 bp | TGTGTACCTTGCAGGCAAGGAGTAGTTGGAATGAGAATGAACAGATCTGAAATCTGCCTGCCTCCTTCCTaGGGCTTTGGGGTGAGAATC | + |
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Preference number: 5 (lower is better) Translates to: CVPCRQGVVGMRMNRSEICLPPS*GFGVRI Trigger: GATTCTCACCCCAAAGCCCAAGGAAGGAGGCAGGCA...GATTTCAGATCTGTTCATTCTCATTCCAACTACTCCTTGCCTGCAAGGTACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CAA 90 bp | TACCTGCAGTCCTTATGTGATTTGAAGGGGGAAAGGACTTTGAGTGGTAGTGGAAAGGGGGAAAGGACTTaGAGTGGTAGTGGAGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: YLQSLCDLKGERTLSGSGKGERT*SGSGEA Trigger: TGCTTCTCCACTACCACTCAAAGTCCTTTCCCCCTT...TCCACTACCACTCAAAGTCCTTTCCCCCTTCAAATCACATAAGGACTGCAGGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CAA 90 bp | CTAAGACACTACCAATTTATGAGTTTGGCTAAGGGACTGGAAAGGAGAAGAGTGTTCCCACTTTGGAGTTaGACCTCTGAGGGTGGCATA | + |
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Preference number: 5 (lower is better) Translates to: LRHYQFMSLAKGLERRRVFPLWS*TSEGGI Trigger: TATGCCACCCTCAGAGGTCAAACTCCAAAGTGGGAA...CACTCTTCTCCTTTCCAGTCCCTTAGCCAAACTCATAAATTGGTAGTGTCTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS-3UTR CAA 90 bp | CTAAGACACTACCAATTTATGAGTTTGGCTAAGGGACTGGAAAGGAGAAGAGTGTACCAATTTATGAGTTaGGCTAAGGGACTGGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: LRHYQFMSLAKGLERRRVYQFMS*AKGLER Trigger: CCTTTCCAGTCCCTTAGCCAAACTCATAAATTGGTA...CACTCTTCTCCTTTCCAGTCCCTTAGCCAAACTCATAAATTGGTAGTGTCTTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS TCA 90 bp | GACTTAAGGAAAGTTAAGTTCTCAGCACCCATTGTAATTTATTTGTaGATGAATGGGAAAAGGGTATCAGTCCAAGGGGAGATCAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: DLRKVKFSAPIVIYL*MNGKRVSVQGEIRW Trigger: CCACCTGATCTCCCCTTGGACTGATACCCTTTTCCCATTCATTCACAAATAAATTACAATGGGTGCTGAGAACTTAACTTTCCTTAAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368905.9 |
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| CDS CAA 90 bp | GGGCTCGTCTTCTTGTGGGGCTCATGGGTGCAGGGGCTGAGACAGTaGCTGACTCCTCGGCCTGTGGGCCAGCCGCAGGTTCAGGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: GLVFLWGSWVQGLRQ*LTPRPVGQPQVQVP Trigger: GGGAACCTGAACCTGCGGCTGGCCCACAGGCCGAGGAGTCAGCAACTGTCTCAGCCCCTGCACCCATGAGCCCCACAAGAAGACGAGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000368902.1 ENST00000368905.9 ENST00000459799.1 ENST00000497147.1 ENST00000602841.5 |
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| CDS CAA 72 bp | TTCTTGTGGGGCTCATGGGTGCAGGGGCTGAGACAGTaGCTGACTCCTCGGCCTGTGGGCCAGCCGCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: FLWGSWVQGLRQ*LTPRPVGQPQV Trigger: AACCTGCGGCTGGCCCACAGGCCGAGGAGTCAGCAACTGTCTCAGCCCCTGCACCCATGAGCCCCACAAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000368902.1 ENST00000368905.9 ENST00000459799.1 ENST00000497147.1 ENST00000602841.5 |
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| CDS CCA 72 bp | TGGCCAGGGTGTCCAGTACCGGTCGATGGGGGCAGATaGCACAAGCAAAGCGTCCATCCCGAAGCATCAGCG | + |
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Preference number: 6 (lower is better) Translates to: WPGCPVPVDGGR*HKQSVHPEASA Trigger: CGCTGATGCTTCGGGATGGACGCTTTGCTTGTGCCATCTGCCCCCATCGACCGGTACTGGACACCCTGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000368902.1 ENST00000368905.9 ENST00000461862.5 ENST00000602841.5 |
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| CDS CCA 72 bp | GCAGTCAGCATGGCCAGGGTGTCCAGTACCGGTCGATaGGGGCAGATGGCACAAGCAAAGCGTCCATCCCGA | + |
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Preference number: 6 (lower is better) Translates to: AVSMARVSSTGR*GQMAQAKRPSR Trigger: TCGGGATGGACGCTTTGCTTGTGCCATCTGCCCCCATCGACCGGTACTGGACACCCTGGCCATGCTGACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000368902.1 ENST00000368905.9 ENST00000461862.5 ENST00000602841.5 |
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| CDS CCA 72 bp | GCAGTCAGCATGGCCAGGGTGTCCAGTACCGGTCGATaGGGGCAGATGGCACAAGCAAAGCTGAGCAGGGGT | + |
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Preference number: 6 (lower is better) Translates to: AVSMARVSSTGR*GQMAQAKLSRG Trigger: ACCCCTGCTCAGCTTTGCTTGTGCCATCTGCCCCCATCGACCGGTACTGGACACCCTGGCCATGCTGACTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000497147.1 |
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| CDS CCA 72 bp | ACAGATGTTTCTTGCCTGCACGGTGGGCAGTCAGCATaGCCAGGGTGTCCAGTACCGGTCGATGGGGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: TDVSCLHGGQSA*PGCPVPVDGGR Trigger: TCTGCCCCCATCGACCGGTACTGGACACCCTGGCCATGCTGACTGCCCACCGTGCAGGCAAGAAACATCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000368902.1 ENST00000368905.9 ENST00000461862.5 ENST00000497147.1 ENST00000602841.5 |
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| CDS GCA 72 bp | ATAAGTGGTCCAGGGGAAGAGGGTTGGGCCCGTCCCTaGCATAGGTCCCACCCTGTCCTAGCAGTCTTTGCA | + |
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Preference number: 6 (lower is better) Translates to: ISGPGEEGWARP*HRSHPVLAVFA Trigger: TGCAAAGACTGCTAGGACAGGGTGGGACCTATGGCAGGGACGGGCCCAACCCTCTTCCCCTGGACCACTTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000471039.1 ENST00000497147.1 |
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| CDS CCA 72 bp | GATAATGGTCCAGGGCTCGTCTTCTTGTGGGGCTCATaGGTGCAGGGGCTGAGACAGTTGCTGACTCCTCGG | + |
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Preference number: 6 (lower is better) Translates to: DNGPGLVFLWGS*VQGLRQLLTPR Trigger: CCGAGGAGTCAGCAACTGTCTCAGCCCCTGCACCCATGAGCCCCACAAGAAGACGAGCCCTGGACCATTATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000368902.1 ENST00000368905.9 ENST00000459799.1 ENST00000497147.1 ENST00000602841.5 |
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| CDS TCA 72 bp | GTACCGGTCGATGGGGGCAGATGGCACAAGCAAAGCTaGGCAGGGGTAGAGAAGAGGATAAGTGGTCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: VPVDGGRWHKQS*AGVEKRISGPG Trigger: CCCTGGACCACTTATCCTCTTCTCTACCCCTGCTCAGCTTTGCTTGTGCCATCTGCCCCCATCGACCGGTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000497147.1 |
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| CDS CCA 72 bp | CCTGGTGACCCAATCTCCACTTCTTCCAGTCCTCACTaGCCGCCAAAGAATCCTAGGTACTCCTGCTGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PGDPISTSSSPH*PPKNPRYSCCP Trigger: AGGACAGCAGGAGTACCTAGGATTCTTTGGCGGCCAGTGAGGACTGGAAGAAGTGGAGATTGGGTCACCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000471039.1 ENST00000497147.1 |
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| CDS CAA 72 bp | AAGTCTATTGAGCCTCTAACCGCAGAACCCTCAGGCTaGAGCCACTCCTTGCTCTTACCGTCCATCCCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: KSIEPLTAEPSG*SHSLLLPSIPK Trigger: CTTCGGGATGGACGGTAAGAGCAAGGAGTGGCTCAAGCCTGAGGGTTCTGCGGTTAGAGGCTCAATAGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471039.1 |
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| CDS CAA 90 bp | CGGCTCCAGATCCTCTCCGCTCACGCTTACTTTGAGCACATTGAGTaGACTCCAATCGTCTCCTTCCCTCTTGAAAGACATCACGACTGT | + |
|
Preference number: 6 (lower is better) Translates to: RLQILSAHAYFEHIE*TPIVSFPLERHHDC Trigger: ACAGTCGTGATGTCTTTCAAGAGGGAAGGAGACGATTGGAGTCAACTCAATGTGCTCAAAGTAAGCGTGAGCGGAGAGGATCTGGAGCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368902.1 |
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| CDS TCA 72 bp | TCCTCTCCGCTCACGCTTACTTTGAGCACATTGAGTTaGCTCCAATCGTCTCCTTCCCTCTTGAAAGACATC | + |
|
Preference number: 6 (lower is better) Translates to: SSPLTLTLSTLS*LQSSPSLLKDI Trigger: GATGTCTTTCAAGAGGGAAGGAGACGATTGGAGTCAACTCAATGTGCTCAAAGTAAGCGTGAGCGGAGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368902.1 |
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| CDS CAA 72 bp | ATCCTCTCCGCTCACGCTTACTTTGAGCACATTGAGTaGACTCCAATCGTCTCCTTCCCTCTTGAAAGACAT | + |
|
Preference number: 6 (lower is better) Translates to: ILSAHAYFEHIE*TPIVSFPLERH Trigger: ATGTCTTTCAAGAGGGAAGGAGACGATTGGAGTCAACTCAATGTGCTCAAAGTAAGCGTGAGCGGAGAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368902.1 |
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| CDS CCA 72 bp | AACATTTTCATCTTTTACCCATCGACCTCGTCCATCTaGGATCCATCCAGAGCTTCGAAGGGTGAGATAATG | + |
|
Preference number: 6 (lower is better) Translates to: NIFIFYPSTSSI*DPSRASKGEIM Trigger: CATTATCTCACCCTTCGAAGCTCTGGATGGATCCCAGATGGACGAGGTCGATGGGTAAAAGATGAAAATGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000368902.1 ENST00000368905.9 ENST00000459799.1 ENST00000497147.1 ENST00000602841.5 |
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