Pregenerated sensors for SCHLAP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000281131Ensembl transcript IDs: ENST00000629145.1
Found 16 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GGAGGTGGTATCTGCATCCCCAGAGGCTGGGTCTTCATTTACAAGTaGAGCATCTGGCACTTCTTCCCCAGTCATTCCATTCTCATCATG | + |
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Preference number: 5 (lower is better) Translates to: GGGICIPRGWVFIYK*SIWHFFPSHSILIM Trigger: CATGATGAGAATGGAATGACTGGGGAAGAAGTGCCAGATGCTTCACTTGTAAATGAAGACCCAGCCTCTGGGGATGCAGATACCACCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000629145.1 |
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| CDS TCA 90 bp | ATGACTCTCCCTACCTCCTTTCTCCATCCCGCTCCTCATCATTGGTaGACTCCACTTATCTGCAGATATTCAGCTTCTTCAGGGAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: MTLPTSFLHPAPHHW*TPLICRYSASSGRW Trigger: CCACCTCCCTGAAGAAGCTGAATATCTGCAGATAAGTGGAGTTCACCAATGATGAGGAGCGGGATGGAGAAAGGAGGTAGGGAGAGTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629145.1 |
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| CDS CCA 90 bp | GCACTTCTTCCCCAGTCATTCCATTCTCATCATGTTTGTGATTTCTaGTGTCATGGCCATATTCCTGGAAGGTGGACCTTGTGTCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: ALLPQSFHSHHVCDF*CHGHIPGRWTLCPQ Trigger: CTGGGGACACAAGGTCCACCTTCCAGGAATATGGCCATGACACCAGAAATCACAAACATGATGAGAATGGAATGACTGGGGAAGAAGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000629145.1 |
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| CDS TCA 90 bp | AAATTAAACCACTTGGCTTTTAACATGTTGCTCATGTTCCTTGGATaGCTCTCCCTACCTCCTTTCTCCATCCCGCTCCTCATCATTGGT | + |
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Preference number: 5 (lower is better) Translates to: KLNHLAFNMLLMFLG*LSLPPFSIPLLIIG Trigger: ACCAATGATGAGGAGCGGGATGGAGAAAGGAGGTAGGGAGAGTCATCCAAGGAACATGAGCAACATGTTAAAAGCCAAGTGGTTTAATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629145.1 |
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| CDS CCA 90 bp | TGGTTCAATTCTTCATTATTTTTGTTGTCTCCCAGCAGAGCCTCTTaGGTTCACCATCTCCAGAAATTAAACCACTTGGCTTTTAACATG | + |
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Preference number: 5 (lower is better) Translates to: WFNSSLFLLSPSRAS*VHHLQKLNHLAFNM Trigger: CATGTTAAAAGCCAAGTGGTTTAATTTCTGGAGATGGTGAACCCAAGAGGCTCTGCTGGGAGACAACAAAAATAATGAAGAATTGAACCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000629145.1 |
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| CDS CAA 90 bp | ACCTTCGCGGTGAGTGTTACAGCTCTTAAGGCGGCGCGTCGGGAGTaGTTCGTTCCTCCCAGTAGGCTCGTGGTCTCGCTGGCTTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: TFAVSVTALKAARRE*FVPPSRLVVSLASG Trigger: TCCTGAAGCCAGCGAGACCACGAGCCTACTGGGAGGAACGAACAACTCCCGACGCGCCGCCTTAAGAGCTGTAACACTCACCGCGAAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629145.1 |
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| CDS CCA 72 bp | CTCCCACCGGGTCCCTCCCACAACACGTGGGAATTATaGGAGCTACAATTCAAGATGATATTTGGGTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: LPPGPSHNTWEL*ELQFKMIFGWG Trigger: TCCCCACCCAAATATCATCTTGAATTGTAGCTCCCATAATTCCCACGTGTTGTGGGAGGGACCCGGTGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629145.1 |
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| CDS CAA 90 bp | TTGGATGACTCTCCCTACCTCCTTTCTCCATCCCGCTCCTCATCATaGGTGAACTCCACTTATCTGCAGATATTCAGCTTCTTCAGGGAG | + |
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Preference number: 6 (lower is better) Translates to: LDDSPYLLSPSRSSS*VNSTYLQIFSFFRE Trigger: CTCCCTGAAGAAGCTGAATATCTGCAGATAAGTGGAGTTCACCAATGATGAGGAGCGGGATGGAGAAAGGAGGTAGGGAGAGTCATCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000629145.1 |
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| CDS CCA 72 bp | CCCCAGTCATTCCATTCTCATCATGTTTGTGATTTCTaGTGTCATGGCCATATTCCTGGAAGGTGGACCTTG | + |
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Preference number: 6 (lower is better) Translates to: PQSFHSHHVCDF*CHGHIPGRWTL Trigger: CAAGGTCCACCTTCCAGGAATATGGCCATGACACCAGAAATCACAAACATGATGAGAATGGAATGACTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629145.1 |
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| CDS CAA 90 bp | ATCACTGCCATTTTCAGAATATTGATGGCACCTGAGGACTTGAAATaGTGTCCAGAACTGGTGGGTTCTTGGTCTCACTCACTTCAAGAA | + |
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Preference number: 6 (lower is better) Translates to: ITAIFRILMAPEDLK*CPELVGSWSHSLQE Trigger: TTCTTGAAGTGAGTGAGACCAAGAACCCACCAGTTCTGGACACAATTTCAAGTCCTCAGGTGCCATCAATATTCTGAAAATGGCAGTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629145.1 |
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| CDS CCA 72 bp | TCTTCATTATTTTTGTTGTCTCCCAGCAGAGCCTCTTaGGTTCACCATCTCCAGAAATTAAACCACTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: SSLFLLSPSRAS*VHHLQKLNHLA Trigger: AGCCAAGTGGTTTAATTTCTGGAGATGGTGAACCCAAGAGGCTCTGCTGGGAGACAACAAAAATAATGAAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000629145.1 |
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| CDS CAA 72 bp | ATTTTCAGAATATTGATGGCACCTGAGGACTTGAAATaGTGTCCAGAACTGGTGGGTTCTTGGTCTCACTCA | + |
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Preference number: 6 (lower is better) Translates to: IFRILMAPEDLK*CPELVGSWSHS Trigger: TGAGTGAGACCAAGAACCCACCAGTTCTGGACACAATTTCAAGTCCTCAGGTGCCATCAATATTCTGAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629145.1 |
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| CDS CAA 72 bp | TTCTTCATTATTTTTGTTGTCTCCCAGCAGAGCCTCTaGGGTTCACCATCTCCAGAAATTAAACCACTTGGC | + |
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Preference number: 6 (lower is better) Translates to: FFIIFVVSQQSL*GSPSPEIKPLG Trigger: GCCAAGTGGTTTAATTTCTGGAGATGGTGAACCCAAGAGGCTCTGCTGGGAGACAACAAAAATAATGAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000629145.1 |
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| CDS TCA 72 bp | AAAAATCACTGCCATTTTCAGAATATTGATGGCACCTaGGGACTTGAAATTGTGTCCAGAACTGGTGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: KNHCHFQNIDGT*GLEIVSRTGGF Trigger: GAACCCACCAGTTCTGGACACAATTTCAAGTCCTCAGGTGCCATCAATATTCTGAAAATGGCAGTGATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000629145.1 |
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| CDS TCA 72 bp | ATTCTTTCCTTTTCCTCTGCTAACTGGTCCCAGTGCTaGTATTCACCGGACTCTGGTTCAATTCTTCATTAT | + |
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Preference number: 6 (lower is better) Translates to: ILSFSSANWSQC*YSPDSGSILHY Trigger: ATAATGAAGAATTGAACCAGAGTCCGGTGAATATCAGCACTGGGACCAGTTAGCAGAGGAAAAGGAAAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000629145.1 |
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| CDS TCA 72 bp | GCTTCCAGGTACATGGTGAAAGTGCCTTATACAGGTTaGATAAAAATCACTGCCATTTTCAGAATATTGATG | + |
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Preference number: 6 (lower is better) Translates to: ASRYMVKVPYTG*IKITAIFRILM Trigger: CATCAATATTCTGAAAATGGCAGTGATTTTTATTCAACCTGTATAAGGCACTTTCACCATGTACCTGGAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000629145.1 |
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