Pregenerated sensors for SCCPDH (Homo sapiens)
Ensembl gene IDs: ENSG00000143653Ensembl transcript IDs: ENST00000366510.4
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCGGCAAGGCAAGCGGCAGTTACTGCCCGACAGTAACGATGGTGTaGGCACCCCCGATGAGAATGCTGCTGCAACACAGACTGGGACGC | + |
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Preference number: 1 (lower is better) Translates to: CGKASGSYCPTVTMV*APPMRMLLQHRLGR Trigger: GCGTCCCAGTCTGTGTTGCAGCAGCATTCTCATCGGGGGTGCGCACACCATCGTTACTGTCGGGCAGTAACTGCCGCTTGCCTTGCCGCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| 3UTR GCA 90 bp | AAGGTGAGATTTCCCTCCTACTGCGGCAAGGCAAGCGGCAGTTACTaGCCGACAGTAACGATGGTGTGCGCACCCCCGATGAGAATGCTG | + |
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Preference number: 1 (lower is better) Translates to: KVRFPSYCGKASGSY*PTVTMVCAPPMRML Trigger: CAGCATTCTCATCGGGGGTGCGCACACCATCGTTACTGTCGGGCAGTAACTGCCGCTTGCCTTGCCGCAGTAGGAGGGAAATCTCACCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| 3UTR GCA 90 bp | AGGCTCAAGACAGTATGTGGAAGGAAGGTGAGATTTCCCTCCTACTaGGGCAAGGCAAGCGGCAGTTACTGCCCGACAGTAACGATGGTG | + |
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Preference number: 1 (lower is better) Translates to: RLKTVCGRKVRFPSY*GKASGSYCPTVTMV Trigger: CACCATCGTTACTGTCGGGCAGTAACTGCCGCTTGCCTTGCCGCAGTAGGAGGGAAATCTCACCTTCCTTCCACATACTGTCTTGAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| 3UTR-3UTR TCA 90 bp | AGATTTCCCTCCTACTGCGGCAAGGCAAGCGGCAGTTACTGCCCGACAGTAACGAATTCACGCACGTTATaGCTTCAGTTAATTCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: RFPSYCGKASGSYCPTVTNSRTL*LQLILP Trigger: TGGAAGAATTAACTGAAGTCATAACGTGCGTGAATT...CGTTACTGTCGGGCAGTAACTGCCGCTTGCCTTGCCGCAGTAGGAGGGAAATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| 3UTR-3UTR GCA 90 bp | CATCGGCAGGTCCAAACATTAAACCACCATTCGATTGACAACCTTTTATTTTTCGCAAGCGGCAGTTACTaGCCGACAGTAACGATGGTG | + |
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Preference number: 2 (lower is better) Translates to: HRQVQTLNHHSIDNLLFFASGSY*PTVTMV Trigger: CACCATCGTTACTGTCGGGCAGTAACTGCCGCTTGC...GAAAAATAAAAGGTTGTCAATCGAATGGTGGTTTAATGTTTGGACCTGCCGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| 3UTR-3UTR GCA 90 bp | CATCGGCAGGTCCAAACATTAAACCACCATTCGATTGACAACCTTTTATTTTTCAGATTTCCCTCCTACTaGGGCAAGGCAAGCGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: HRQVQTLNHHSIDNLLFFRFPSY*GKASGS Trigger: ACTGCCGCTTGCCTTGCCGCAGTAGGAGGGAAATCT...GAAAAATAAAAGGTTGTCAATCGAATGGTGGTTTAATGTTTGGACCTGCCGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| 3UTR GCA 72 bp | TTTCCCTCCTACTGCGGCAAGGCAAGCGGCAGTTACTaGCCGACAGTAACGATGGTGTGCGCACCCCCGATG | + |
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Preference number: 3 (lower is better) Translates to: FPSYCGKASGSY*PTVTMVCAPPM Trigger: CATCGGGGGTGCGCACACCATCGTTACTGTCGGGCAGTAACTGCCGCTTGCCTTGCCGCAGTAGGAGGGAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| 3UTR GCA 72 bp | GCAAGCGGCAGTTACTGCCCGACAGTAACGATGGTGTaGGCACCCCCGATGAGAATGCTGCTGCAACACAGA | + |
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Preference number: 3 (lower is better) Translates to: ASGSYCPTVTMV*APPMRMLLQHR Trigger: TCTGTGTTGCAGCAGCATTCTCATCGGGGGTGCGCACACCATCGTTACTGTCGGGCAGTAACTGCCGCTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| 3UTR GCA 72 bp | ACAGTATGTGGAAGGAAGGTGAGATTTCCCTCCTACTaGGGCAAGGCAAGCGGCAGTTACTGCCCGACAGTA | + |
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Preference number: 3 (lower is better) Translates to: TVCGRKVRFPSY*GKASGSYCPTV Trigger: TACTGTCGGGCAGTAACTGCCGCTTGCCTTGCCGCAGTAGGAGGGAAATCTCACCTTCCTTCCACATACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| 3UTR CCA 72 bp | GTGCAGTTTAATTTAGCAAAGGCTCAAGACAGTATGTaGAAGGAAGGTGAGATTTCCCTCCTACTGCGGCAA | + |
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Preference number: 3 (lower is better) Translates to: VQFNLAKAQDSM*KEGEISLLLRQ Trigger: TTGCCGCAGTAGGAGGGAAATCTCACCTTCCTTCCACATACTGTCTTGAGCCTTTGCTAAATTAAACTGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR GCA 90 bp | GGCAGTTACTGCCCGACAGTAACGATGGTGTGCGCACCCCCGATGAGAATGCTGTTCTCCAGCACCCGCTaGAGCTTCTCCCGGGAGCGG | + |
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Preference number: 4 (lower is better) Translates to: GSYCPTVTMVCAPPMRMLFSSTR*SFSRER Trigger: CCGCTCCCGGGAGAAGCTGCAGCGGGTGCTGGAGAA...CAGCATTCTCATCGGGGGTGCGCACACCATCGTTACTGTCGGGCAGTAACTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR CCA 90 bp | GGCAGTTACTGCCCGACAGTAACGATGGTGTGCGCACCCCCGATGAGAATGCTGTGCTGCAACACAGACTaGGACGCCGCCTCCCCCATT | + |
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Preference number: 4 (lower is better) Translates to: GSYCPTVTMVCAPPMRMLCCNTD*DAASPI Trigger: AATGGGGGAGGCGGCGTCCCAGTCTGTGTTGCAGCA...CAGCATTCTCATCGGGGGTGCGCACACCATCGTTACTGTCGGGCAGTAACTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR TCA 90 bp | GTAACGATGGTGTGCGCACCCCCGATGAGAATGCTGCTGCAACACAGACTGGGATGTGCGCACCCCCGATaGGAATGCTGCTGCAACACA | + |
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Preference number: 4 (lower is better) Translates to: VTMVCAPPMRMLLQHRLGCAHPR*ECCCNT Trigger: TGTGTTGCAGCAGCATTCTCATCGGGGGTGCGCACA...TCCCAGTCTGTGTTGCAGCAGCATTCTCATCGGGGGTGCGCACACCATCGTTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR GCA 90 bp | GGCAGTTACTGCCCGACAGTAACGATGGTGTGCGCACCCCCGATGAGAATGCTGAGATTTCCCTCCTACTaGGGCAAGGCAAGCGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: GSYCPTVTMVCAPPMRMLRFPSY*GKASGS Trigger: ACTGCCGCTTGCCTTGCCGCAGTAGGAGGGAAATCT...CAGCATTCTCATCGGGGGTGCGCACACCATCGTTACTGTCGGGCAGTAACTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR GCA 90 bp | GGCAGTTACTGCCCGACAGTAACGATGGTGTGCGCACCCCCGATGAGAATGCTGACAGTAACGATGGTGTaGGCACCCCCGATGAGAATG | + |
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Preference number: 4 (lower is better) Translates to: GSYCPTVTMVCAPPMRMLTVTMV*APPMRM Trigger: CATTCTCATCGGGGGTGCGCACACCATCGTTACTGT...CAGCATTCTCATCGGGGGTGCGCACACCATCGTTACTGTCGGGCAGTAACTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR GCA 90 bp | GTAACGATGGTGTGCGCACCCCCGATGAGAATGCTGCTGCAACACAGACTGGGAGCAAGCGGCAGTTACTaGCCGACAGTAACGATGGTG | + |
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Preference number: 4 (lower is better) Translates to: VTMVCAPPMRMLLQHRLGASGSY*PTVTMV Trigger: CACCATCGTTACTGTCGGGCAGTAACTGCCGCTTGC...TCCCAGTCTGTGTTGCAGCAGCATTCTCATCGGGGGTGCGCACACCATCGTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR TCA 90 bp | GGCAGTTACTGCCCGACAGTAACGATGGTGTGCGCACCCCCGATGAGAATGCTGCCTTGGCTGTATCCTTaGCCAAAGAATGTCAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: GSYCPTVTMVCAPPMRMLPWLYP*PKNVSV Trigger: CACGCTGACATTCTTTGGTCAAGGATACAGCCAAGG...CAGCATTCTCATCGGGGGTGCGCACACCATCGTTACTGTCGGGCAGTAACTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR TCA 90 bp | GTAACGATGGTGTGCGCACCCCCGATGAGAATGCTGCTGCAACACAGACTGGGAAGAGTCATGGCTGCCTaGACCATAGCTATGGGGGTA | + |
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Preference number: 4 (lower is better) Translates to: VTMVCAPPMRMLLQHRLGRVMAA*TIAMGV Trigger: TACCCCCATAGCTATGGTTCAGGCAGCCATGACTCT...TCCCAGTCTGTGTTGCAGCAGCATTCTCATCGGGGGTGCGCACACCATCGTTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR CCA 90 bp | GGCAGTTACTGCCCGACAGTAACGATGGTGTGCGCACCCCCGATGAGAATGCTGTACTCCCAGATCTGCTaGAATGGAGTCAAAGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: GSYCPTVTMVCAPPMRMLYSQIC*NGVKAA Trigger: AGCGGCTTTGACTCCATTCCAGCAGATCTGGGAGTA...CAGCATTCTCATCGGGGGTGCGCACACCATCGTTACTGTCGGGCAGTAACTGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR TCA 90 bp | AGATTTCCCTCCTACTGCGGCAAGGCAAGCGGCAGTTACTGCCCGACAGTAACGACTGAGGTTCTCCACTaGTGTCGATACAACTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: RFPSYCGKASGSYCPTVTTEVLH*CRYNWL Trigger: GAGCCAGTTGTATCGACATCAGTGGAGAACCTCAGT...CGTTACTGTCGGGCAGTAACTGCCGCTTGCCTTGCCGCAGTAGGAGGGAAATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR TCA 90 bp | GTAACGATGGTGTGCGCACCCCCGATGAGAATGCTGCTGCAACACAGACTGGGATTCCAGGTACCATCATaGATGCTCAACCCCTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: VTMVCAPPMRMLLQHRLGFQVPS*MLNPSG Trigger: ACCTGAGGGGTTGAGCATTCATGATGGTACCTGGAA...TCCCAGTCTGTGTTGCAGCAGCATTCTCATCGGGGGTGCGCACACCATCGTTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR GCA 90 bp | TTACTGCCCGACAGTAACGATGGTGTGCGCACCCCCGATGAGAATGCTGCTGCAAGGTACCATCATGAATaGTCAACCCCTCAGGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LLPDSNDGVRTPDENAAARYHHE*STPQVL Trigger: CAGGACCTGAGGGGTTGAGCATTCATGATGGTACCT...TGCAGCAGCATTCTCATCGGGGGTGCGCACACCATCGTTACTGTCGGGCAGTAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR CCA 90 bp | GACGCCGCCTCCCCCATTAGACCTGCCAGCTCATTCGTGAAAATCTACCAGGAACCAGATCTGCTGGAATaGAGTCAAAGCCGCTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: DAASPIRPASSFVKIYQEPDLLE*SQSRCF Trigger: GAAGCAGCGGCTTTGACTCCATTCCAGCAGATCTGG...TTCCTGGTAGATTTTCACGAATGAGCTGGCAGGTCTAATGGGGGAGGCGGCGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR TCA 90 bp | TTACTGCCCGACAGTAACGATGGTGTGCGCACCCCCGATGAGAATGCTGCTGCAATGGTCCTACGCAATTaGGGACAACTGTTGCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: LLPDSNDGVRTPDENAAAMVLRN*GQLLPV Trigger: AACAGGCAACAGTTGTCCTCAATTGCGTAGGACCAT...TGCAGCAGCATTCTCATCGGGGGTGCGCACACCATCGTTACTGTCGGGCAGTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR TCA 90 bp | TTACTGCCCGACAGTAACGATGGTGTGCGCACCCCCGATGAGAATGCTGCTGCAAGCCGCTGCTTCCAATaGTATAAACCCCTTTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: LLPDSNDGVRTPDENAAASRCFQ*YKPLCL Trigger: CAGACAAAGGGGTTTATATCATTGGAAGCAGCGGCT...TGCAGCAGCATTCTCATCGGGGGTGCGCACACCATCGTTACTGTCGGGCAGTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR TCA 90 bp | GACGCCGCCTCCCCCATTAGACCTGCCAGCTCATTCGTGAAAATCTACCAGGAACCCGCCTTAGGCAGATaGGAAGCATCACTTAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: DAASPIRPASSFVKIYQEPALGR*EASLRR Trigger: TCTTCTAAGTGATGCTTCTCATCTGCCTAAGGCGGG...TTCCTGGTAGATTTTCACGAATGAGCTGGCAGGTCTAATGGGGGAGGCGGCGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR TCA 90 bp | AGATTTCCCTCCTACTGCGGCAAGGCAAGCGGCAGTTACTGCCCGACAGTAACGCTGCCAGCTCATTCGTaGAAATCTACCAGGAACACA | + |
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Preference number: 4 (lower is better) Translates to: RFPSYCGKASGSYCPTVTLPAHS*KSTRNT Trigger: TGTGTTCCTGGTAGATTTTCACGAATGAGCTGGCAG...CGTTACTGTCGGGCAGTAACTGCCGCTTGCCTTGCCGCAGTAGGAGGGAAATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR CCA 90 bp | AGATTTCCCTCCTACTGCGGCAAGGCAAGCGGCAGTTACTGCCCGACAGTAACGCCTTCTCTTCAATTTTaGACCAATGAGCGGGACAGG | + |
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Preference number: 4 (lower is better) Translates to: RFPSYCGKASGSYCPTVTPSLQF*TNERDR Trigger: CCTGTCCCGCTCATTGGTCCAAAATTGAAGAGAAGG...CGTTACTGTCGGGCAGTAACTGCCGCTTGCCTTGCCGCAGTAGGAGGGAAATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR TCA 90 bp | GTAACGATGGTGTGCGCACCCCCGATGAGAATGCTGCTGCAACACAGACTGGGATCAATTTTGGACCAATaGGCGGGACAGGTTTCAGAT | + |
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Preference number: 4 (lower is better) Translates to: VTMVCAPPMRMLLQHRLGSILDQ*AGQVSD Trigger: ATCTGAAACCTGTCCCGCTCATTGGTCCAAAATTGA...TCCCAGTCTGTGTTGCAGCAGCATTCTCATCGGGGGTGCGCACACCATCGTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR TCA 90 bp | AGATTTCCCTCCTACTGCGGCAAGGCAAGCGGCAGTTACTGCCCGACAGTAACGGAATGTCAGCGTGAATaGGGCAGCATCAATCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: RFPSYCGKASGSYCPTVTECQRE*GSINLF Trigger: AAACAGATTGATGCTGCCTCATTCACGCTGACATTC...CGTTACTGTCGGGCAGTAACTGCCGCTTGCCTTGCCGCAGTAGGAGGGAAATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR TCA 90 bp | GTAACGATGGTGTGCGCACCCCCGATGAGAATGCTGCTGCAACACAGACTGGGACAAAGAATGTCAGCGTaGATGAGGCAGCATCAATCT | + |
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Preference number: 4 (lower is better) Translates to: VTMVCAPPMRMLLQHRLGQRMSA*MRQHQS Trigger: AGATTGATGCTGCCTCATTCACGCTGACATTCTTTG...TCCCAGTCTGTGTTGCAGCAGCATTCTCATCGGGGGTGCGCACACCATCGTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR GCA 90 bp | GTAACGATGGTGTGCGCACCCCCGATGAGAATGCTGCTGCAACACAGACTGGGATATTACTCCCAGATCTaGTGGAATGGAGTCAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: VTMVCAPPMRMLLQHRLGYYSQI*WNGVKA Trigger: GGCTTTGACTCCATTCCAGCAGATCTGGGAGTAATA...TCCCAGTCTGTGTTGCAGCAGCATTCTCATCGGGGGTGCGCACACCATCGTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR CCA 90 bp | GTAACGATGGTGTGCGCACCCCCGATGAGAATGCTGCTGCAACACAGACTGGGAGCTCAAGACAGTATGTaGAAGGAAGGTGAGATTTCC | + |
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Preference number: 4 (lower is better) Translates to: VTMVCAPPMRMLLQHRLGAQDSM*KEGEIS Trigger: GGAAATCTCACCTTCCTTCCACATACTGTCTTGAGC...TCCCAGTCTGTGTTGCAGCAGCATTCTCATCGGGGGTGCGCACACCATCGTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR TCA 90 bp | GGCAGTTACTGCCCGACAGTAACGATGGTGTGCGCACCCCCGATGAGAATGCTGGAATGGAATAACCTTTaGGTTCCCGACAATAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: GSYCPTVTMVCAPPMRMLEWNNL*VPDNKK Trigger: TTTCTTATTGTCGGGAACTCAAAGGTTATTCCATTC...CAGCATTCTCATCGGGGGTGCGCACACCATCGTTACTGTCGGGCAGTAACTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR TCA 90 bp | GTAACGATGGTGTGCGCACCCCCGATGAGAATGCTGCTGCAACACAGACTGGGAACCATGGGAATTTTATaGGAAGTTGCCTTCCAATTC | + |
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Preference number: 4 (lower is better) Translates to: VTMVCAPPMRMLLQHRLGTMGIL*EVAFQF Trigger: GAATTGGAAGGCAACTTCTCATAAAATTCCCATGGT...TCCCAGTCTGTGTTGCAGCAGCATTCTCATCGGGGGTGCGCACACCATCGTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR TCA 90 bp | GTAACGATGGTGTGCGCACCCCCGATGAGAATGCTGCTGCAACACAGACTGGGACAATACCGTGTTTGTTaGGTCTGTCAATCAACTTTG | + |
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Preference number: 4 (lower is better) Translates to: VTMVCAPPMRMLLQHRLGQYRVC*VCQSTL Trigger: CAAAGTTGATTGACAGACTCAACAAACACGGTATTG...TCCCAGTCTGTGTTGCAGCAGCATTCTCATCGGGGGTGCGCACACCATCGTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR CCA 90 bp | CAGTTTAATTTAGCAAAGGCTCAAGACAGTATGTGGAAGGAAGGTGAGATTTCCTCCTCGGTCACGAACTaGCCGGTGAAGCCAGACGCG | + |
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Preference number: 4 (lower is better) Translates to: QFNLAKAQDSMWKEGEISSSVTN*PVKPDA Trigger: CGCGTCTGGCTTCACCGGCCAGTTCGTGACCGAGGA...GGAAATCTCACCTTCCTTCCACATACTGTCTTGAGCCTTTGCTAAATTAAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR TCA 90 bp | CATCGGCAGGTCCAAACATTAAACCACCATTCGATTGACAACCTTTTATTTTTCTCACGAACTGGCCGGTaGAGCCAGACGCGCCGAACA | + |
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Preference number: 4 (lower is better) Translates to: HRQVQTLNHHSIDNLLFFSRTGR*SQTRRT Trigger: TGTTCGGCGCGTCTGGCTTCACCGGCCAGTTCGTGA...GAAAAATAAAAGGTTGTCAATCGAATGGTGGTTTAATGTTTGGACCTGCCGATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR TCA 90 bp | GACGCCGCCTCCCCCATTAGACCTGCCAGCTCATTCGTGAAAATCTACCAGGAAAAAACCATAAATTGCTaGCTTCCAGGTACCATCATG | + |
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Preference number: 4 (lower is better) Translates to: DAASPIRPASSFVKIYQEKTINC*LPGTIM Trigger: CATGATGGTACCTGGAAGTCAGCAATTTATGGTTTT...TTCCTGGTAGATTTTCACGAATGAGCTGGCAGGTCTAATGGGGGAGGCGGCGTC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR TCA 90 bp | TTACTGCCCGACAGTAACGATGGTGTGCGCACCCCCGATGAGAATGCTGCTGCAAATTCACGCACGTTATaGCTTCAGTTAATTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: LLPDSNDGVRTPDENAAANSRTL*LQLILP Trigger: TGGAAGAATTAACTGAAGTCATAACGTGCGTGAATT...TGCAGCAGCATTCTCATCGGGGGTGCGCACACCATCGTTACTGTCGGGCAGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR GCA 90 bp | GACGCCGCCTCCCCCATTAGACCTGCCAGCTCATTCGTGAAAATCTACCAGGAAATTGAGGACAACTGTTaGCTGTTTAGCCATTTCATC | + |
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Preference number: 4 (lower is better) Translates to: DAASPIRPASSFVKIYQEIEDNC*LFSHFI Trigger: GATGAAATGGCTAAACAGGCAACAGTTGTCCTCAAT...TTCCTGGTAGATTTTCACGAATGAGCTGGCAGGTCTAATGGGGGAGGCGGCGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR CCA 90 bp | GTAACGATGGTGTGCGCACCCCCGATGAGAATGCTGCTGCAACACAGACTGGGACCGACAATAAGAAATTaGCCACCTTCTCTTCAATTT | + |
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Preference number: 4 (lower is better) Translates to: VTMVCAPPMRMLLQHRLGPTIRN*PPSLQF Trigger: AAATTGAAGAGAAGGTGGCCAATTTCTTATTGTCGG...TCCCAGTCTGTGTTGCAGCAGCATTCTCATCGGGGGTGCGCACACCATCGTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR TCA 90 bp | CAGTTTAATTTAGCAAAGGCTCAAGACAGTATGTGGAAGGAAGGTGAGATTTCCTATGTGGAAGGAAGGTaGGATTTCCCTCCTACTGCG | + |
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Preference number: 4 (lower is better) Translates to: QFNLAKAQDSMWKEGEISYVEGR*DFPPTA Trigger: CGCAGTAGGAGGGAAATCTCACCTTCCTTCCACATA...GGAAATCTCACCTTCCTTCCACATACTGTCTTGAGCCTTTGCTAAATTAAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR GCA 90 bp | TTTGACAATCGTTTCCACATACACTCAGACAGGCTTACAGAAGAATTTCAAATAAGGTGGAAAGGCCTCTaGTCGGTCGCCATGACGAGT | + |
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Preference number: 4 (lower is better) Translates to: FDNRFHIHSDRLTEEFQIRWKGL*SVAMTS Trigger: ACTCGTCATGGCGACCGAGCAGAGGCCTTTCCACCT...TATTTGAAATTCTTCTGTAAGCCTGTCTGAGTGTATGTGGAAACGATTGTCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR CCA 90 bp | CAGTTTAATTTAGCAAAGGCTCAAGACAGTATGTGGAAGGAAGGTGAGATTTCCCACATAGCCAGCCTCTaGTCCTTTCACCTGAGTACA | + |
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Preference number: 4 (lower is better) Translates to: QFNLAKAQDSMWKEGEISHIASL*SFHLST Trigger: TGTACTCAGGTGAAAGGACCAGAGGCTGGCTATGTG...GGAAATCTCACCTTCCTTCCACATACTGTCTTGAGCCTTTGCTAAATTAAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR GCA 90 bp | CAGTTTAATTTAGCAAAGGCTCAAGACAGTATGTGGAAGGAAGGTGAGATTTCCTGTTTTGGAAAAAGCTaGTCCAGGTGTGAAGACCCC | + |
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Preference number: 4 (lower is better) Translates to: QFNLAKAQDSMWKEGEISCFGKS*SRCEDP Trigger: GGGGTCTTCACACCTGGAGCAGCTTTTTCCAAAACA...GGAAATCTCACCTTCCTTCCACATACTGTCTTGAGCCTTTGCTAAATTAAACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR TCA 90 bp | CATCGGCAGGTCCAAACATTAAACCACCATTCGATTGACAACCTTTTATTTTTCCAACCCCTCAGGTCCTaGATGTATAGTCAGGAAACT | + |
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Preference number: 4 (lower is better) Translates to: HRQVQTLNHHSIDNLLFFQPLRS*MYSQET Trigger: AGTTTCCTGACTATACATTCAGGACCTGAGGGGTTG...GAAAAATAAAAGGTTGTCAATCGAATGGTGGTTTAATGTTTGGACCTGCCGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR GCA 90 bp | CAGTTTAATTTAGCAAAGGCTCAAGACAGTATGTGGAAGGAAGGTGAGATTTCCTCTTATCTGTACCAGTaGCTTGGCTGTATCCTTGAC | + |
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Preference number: 4 (lower is better) Translates to: QFNLAKAQDSMWKEGEISSYLYQ*LGCILD Trigger: GTCAAGGATACAGCCAAGGCACTGGTACAGATAAGA...GGAAATCTCACCTTCCTTCCACATACTGTCTTGAGCCTTTGCTAAATTAAACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR CCA 90 bp | CAGTTTAATTTAGCAAAGGCTCAAGACAGTATGTGGAAGGAAGGTGAGATTTCCTTCATCAAGCGAGGCTaGATTAGCAATATCACAGAT | + |
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Preference number: 4 (lower is better) Translates to: QFNLAKAQDSMWKEGEISFIKRG*ISNITD Trigger: ATCTGTGATATTGCTAATCCAGCCTCGCTTGATGAA...GGAAATCTCACCTTCCTTCCACATACTGTCTTGAGCCTTTGCTAAATTAAACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR CCA 90 bp | CATCGGCAGGTCCAAACATTAAACCACCATTCGATTGACAACCTTTTATTTTTCTCCATAAAACCGATATaGTCCTACGCAATTGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: HRQVQTLNHHSIDNLLFFSIKPI*SYAIED Trigger: GTCCTCAATTGCGTAGGACCATATCGGTTTTATGGA...GAAAAATAAAAGGTTGTCAATCGAATGGTGGTTTAATGTTTGGACCTGCCGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR GCA 90 bp | CATCGGCAGGTCCAAACATTAAACCACCATTCGATTGACAACCTTTTATTTTTCATAAACCCCTTTGTCTaGAGCTTTCTCATGATACTT | + |
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Preference number: 4 (lower is better) Translates to: HRQVQTLNHHSIDNLLFFINPFV*SFLMIL Trigger: AAGTATCATGAGAAAGCTGCAGACAAAGGGGTTTAT...GAAAAATAAAAGGTTGTCAATCGAATGGTGGTTTAATGTTTGGACCTGCCGATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR TCA 90 bp | TTTGACAATCGTTTCCACATACACTCAGACAGGCTTACAGAAGAATTTCAAATATCTGCAGCTTTCTCATaGTACTTCAGTTGCATTAGT | + |
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Preference number: 4 (lower is better) Translates to: FDNRFHIHSDRLTEEFQISAAFS*YFSCIS Trigger: ACTAATGCAACTGAAGTATCATGAGAAAGCTGCAGA...TATTTGAAATTCTTCTGTAAGCCTGTCTGAGTGTATGTGGAAACGATTGTCAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR CCA 90 bp | CATCGGCAGGTCCAAACATTAAACCACCATTCGATTGACAACCTTTTATTTTTCAAAGGAGAAGAACCATaGGAATTTTATGAGAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: HRQVQTLNHHSIDNLLFFKGEEP*EFYEKL Trigger: CAACTTCTCATAAAATTCCCATGGTTCTTCTCCTTT...GAAAAATAAAAGGTTGTCAATCGAATGGTGGTTTAATGTTTGGACCTGCCGATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR GCA 90 bp | TTTGACAATCGTTTCCACATACACTCAGACAGGCTTACAGAAGAATTTCAAATAAATTTTATGAGAAGTTaGCTTCCAATTCCAAACCTC | + |
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Preference number: 4 (lower is better) Translates to: FDNRFHIHSDRLTEEFQINFMRS*LPIPNL Trigger: GAGGTTTGGAATTGGAAGGCAACTTCTCATAAAATT...TATTTGAAATTCTTCTGTAAGCCTGTCTGAGTGTATGTGGAAACGATTGTCAAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS GCA 90 bp | AGTGTTGGTCTTCCCAGCTTCAGGGCCGCCTTCTCCAGCACCCGCTaGAGCTTCTCCCGGGAGCGGCCCGCCACGGCCCAGGGCAGGCGG | + |
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Preference number: 5 (lower is better) Translates to: SVGLPSFRAAFSSTR*SFSRERPATAQGRR Trigger: CCGCCTGCCCTGGGCCGTGGCGGGCCGCTCCCGGGAGAAGCTGCAGCGGGTGCTGGAGAAGGCGGCCCTGAAGCTGGGAAGACCAACACT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS TCA 90 bp | GGTCCACCTGCTCCCGGGCCACCTCCTCGGTCACGAACTGGCCGGTaGAGCCAGACGCGCCGAACACCACCAGGTGGAAAGGCCTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: GPPAPGPPPRSRTGR*SQTRRTPPGGKASA Trigger: AGCAGAGGCCTTTCCACCTGGTGGTGTTCGGCGCGTCTGGCTTCACCGGCCAGTTCGTGACCGAGGAGGTGGCCCGGGAGCAGGTGGACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR CAA 90 bp | GACGCCGCCTCCCCCATTAGACCTGCCAGCTCATTCGTGAAAATCTACCAGGAACTTCAGATGACAGTGTaGGTCTTCCCAGCTTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: DAASPIRPASSFVKIYQELQMTV*VFPASG Trigger: CCCTGAAGCTGGGAAGACCAACACTGTCATCTGAAG...TTCCTGGTAGATTTTCACGAATGAGCTGGCAGGTCTAATGGGGGAGGCGGCGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR CAA 90 bp | AGATTTCCCTCCTACTGCGGCAAGGCAAGCGGCAGTTACTGCCCGACAGTAACGTATGGTCCTACGCAATaGAGGACAACTGTTGCCTGT | + |
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Preference number: 5 (lower is better) Translates to: RFPSYCGKASGSYCPTVTYGPTQ*RTTVAC Trigger: ACAGGCAACAGTTGTCCTCAATTGCGTAGGACCATA...CGTTACTGTCGGGCAGTAACTGCCGCTTGCCTTGCCGCAGTAGGAGGGAAATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR CAA 90 bp | AGATTTCCCTCCTACTGCGGCAAGGCAAGCGGCAGTTACTGCCCGACAGTAACGATCTGTACCAGTGCCTaGGCTGTATCCTTGACCAAA | + |
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Preference number: 5 (lower is better) Translates to: RFPSYCGKASGSYCPTVTICTSA*AVSLTK Trigger: TTTGGTCAAGGATACAGCCAAGGCACTGGTACAGAT...CGTTACTGTCGGGCAGTAACTGCCGCTTGCCTTGCCGCAGTAGGAGGGAAATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR CAA 90 bp | TTACTGCCCGACAGTAACGATGGTGTGCGCACCCCCGATGAGAATGCTGCTGCACTCCAAAACCATAAATaGCTGACTTCCAGGTACCAT | + |
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Preference number: 5 (lower is better) Translates to: LLPDSNDGVRTPDENAAALQNHK*LTSRYH Trigger: ATGGTACCTGGAAGTCAGCAATTTATGGTTTTGGAG...TGCAGCAGCATTCTCATCGGGGGTGCGCACACCATCGTTACTGTCGGGCAGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR CAA 90 bp | GGCAGTTACTGCCCGACAGTAACGATGGTGTGCGCACCCCCGATGAGAATGCTGTCAATCAACTTTGTTTaGGAAAAAGCTGCTCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: GSYCPTVTMVCAPPMRMLSINFV*EKAAPG Trigger: ACCTGGAGCAGCTTTTTCCAAAACAAAGTTGATTGA...CAGCATTCTCATCGGGGGTGCGCACACCATCGTTACTGTCGGGCAGTAACTGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR CAA 90 bp | AGATTTCCCTCCTACTGCGGCAAGGCAAGCGGCAGTTACTGCCCGACAGTAACGGTCTGTCAATCAACTTaGTTTTGGAAAAAGCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: RFPSYCGKASGSYCPTVTVCQST*FWKKLL Trigger: GAGCAGCTTTTTCCAAAACAAAGTTGATTGACAGAC...CGTTACTGTCGGGCAGTAACTGCCGCTTGCCTTGCCGCAGTAGGAGGGAAATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS TCA 90 bp | TTACTCCCAGATCTGCTGGAATGGAGTCAAAGCCGCTGCTTCCAATaGTATAAACCCCTTTGTCTGCAGCTTTCTCATGATACTTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: LLPDLLEWSQSRCFQ*YKPLCLQLSHDTSV Trigger: AACTGAAGTATCATGAGAAAGCTGCAGACAAAGGGGTTTATATCATTGGAAGCAGCGGCTTTGACTCCATTCCAGCAGATCTGGGAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR CAA 90 bp | CAGTTTAATTTAGCAAAGGCTCAAGACAGTATGTGGAAGGAAGGTGAGATTTCCGCCTTGGCTGTATCCTaGACCAAAGAATGTCAGCGT | + |
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Preference number: 5 (lower is better) Translates to: QFNLAKAQDSMWKEGEISALAVS*TKECQR Trigger: ACGCTGACATTCTTTGGTCAAGGATACAGCCAAGGC...GGAAATCTCACCTTCCTTCCACATACTGTCTTGAGCCTTTGCTAAATTAAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS GCA 90 bp | TTCTCCATAAAACCGATATGGTCCTACGCAATTGAGGACAACTGTTaGCTGTTTAGCCATTTCATCAAGCGAGGCTGGATTAGCAATATC | + |
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Preference number: 5 (lower is better) Translates to: FSIKPIWSYAIEDNC*LFSHFIKRGWISNI Trigger: GATATTGCTAATCCAGCCTCGCTTGATGAAATGGCTAAACAGGCAACAGTTGTCCTCAATTGCGTAGGACCATATCGGTTTTATGGAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS TCA 90 bp | ATATTTGGTTTGTTCTTATCTGTACCAGTGCCTTGGCTGTATCCTTaGCCAAAGAATGTCAGCGTGAATGAGGCAGCATCAATCTGTTTT | + |
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Preference number: 5 (lower is better) Translates to: IFGLFLSVPVPWLYP*PKNVSVNEAASICF Trigger: AAAACAGATTGATGCTGCCTCATTCACGCTGACATTCTTTGGTCAAGGATACAGCCAAGGCACTGGTACAGATAAGAACAAACCAAATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS GCA 90 bp | CAAAGTACCATTCATTTTATTTCTGGTATATATTACTCCCAGATCTaGTGGAATGGAGTCAAAGCCGCTGCTTCCAATGATATAAACCCC | + |
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Preference number: 5 (lower is better) Translates to: QSTIHFISGIYYSQI*WNGVKAAASNDINP Trigger: GGGGTTTATATCATTGGAAGCAGCGGCTTTGACTCCATTCCAGCAGATCTGGGAGTAATATATACCAGAAATAAAATGAATGGTACTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR CAA 90 bp | CAGTTTAATTTAGCAAAGGCTCAAGACAGTATGTGGAAGGAAGGTGAGATTTCCTTCATACAAGTAACGTaGAGTCCTCCTTACAACAGA | + |
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Preference number: 5 (lower is better) Translates to: QFNLAKAQDSMWKEGEISFIQVT*SPPYNR Trigger: TCTGTTGTAAGGAGGACTCAACGTTACTTGTATGAA...GGAAATCTCACCTTCCTTCCACATACTGTCTTGAGCCTTTGCTAAATTAAACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS CCA 90 bp | AGTACCATTCATTTTATTTCTGGTATATATTACTCCCAGATCTGCTaGAATGGAGTCAAAGCCGCTGCTTCCAATGATATAAACCCCTTT | + |
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Preference number: 5 (lower is better) Translates to: STIHFISGIYYSQIC*NGVKAAASNDINPF Trigger: AAAGGGGTTTATATCATTGGAAGCAGCGGCTTTGACTCCATTCCAGCAGATCTGGGAGTAATATATACCAGAAATAAAATGAATGGTACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR CAA 90 bp | CATCGGCAGGTCCAAACATTAAACCACCATTCGATTGACAACCTTTTATTTTTCAACTCAATACCGTGTTaGTTGAGTCTGTCAATCAAC | + |
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Preference number: 5 (lower is better) Translates to: HRQVQTLNHHSIDNLLFFNSIPC*LSLSIN Trigger: GTTGATTGACAGACTCAACAAACACGGTATTGAGTT...GAAAAATAAAAGGTTGTCAATCGAATGGTGGTTTAATGTTTGGACCTGCCGATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR CAA 90 bp | TTTGACAATCGTTTCCACATACACTCAGACAGGCTTACAGAAGAATTTCAAATAGTGTTGGGCCTTGTTTaGAAAAATAGCCAAAGGAGA | + |
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Preference number: 5 (lower is better) Translates to: FDNRFHIHSDRLTEEFQIVLGLV*KNSQRR Trigger: TCTCCTTTGGCTATTTTTCAAAACAAGGCCCAACAC...TATTTGAAATTCTTCTGTAAGCCTGTCTGAGTGTATGTGGAAACGATTGTCAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR CAA 90 bp | TTTGACAATCGTTTCCACATACACTCAGACAGGCTTACAGAAGAATTTCAAATAGAATTTTATGAGAAGTaGCCTTCCAATTCCAAACCT | + |
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Preference number: 5 (lower is better) Translates to: FDNRFHIHSDRLTEEFQIEFYEK*PSNSKP Trigger: AGGTTTGGAATTGGAAGGCAACTTCTCATAAAATTC...TATTTGAAATTCTTCTGTAAGCCTGTCTGAGTGTATGTGGAAACGATTGTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS-3UTR CAA 90 bp | TTTGACAATCGTTTCCACATACACTCAGACAGGCTTACAGAAGAATTTCAAATATCAATACCGTGTTTGTaGAGTCTGTCAATCAACTTT | + |
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Preference number: 5 (lower is better) Translates to: FDNRFHIHSDRLTEEFQISIPCL*SLSINF Trigger: AAAGTTGATTGACAGACTCAACAAACACGGTATTGA...TATTTGAAATTCTTCTGTAAGCCTGTCTGAGTGTATGTGGAAACGATTGTCAAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS GCA 72 bp | CTTCCCAGCTTCAGGGCCGCCTTCTCCAGCACCCGCTaGAGCTTCTCCCGGGAGCGGCCCGCCACGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: LPSFRAAFSSTR*SFSRERPATAQ Trigger: CTGGGCCGTGGCGGGCCGCTCCCGGGAGAAGCTGCAGCGGGTGCTGGAGAAGGCGGCCCTGAAGCTGGGAAG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS TCA 72 bp | GCTCCCGGGCCACCTCCTCGGTCACGAACTGGCCGGTaGAGCCAGACGCGCCGAACACCACCAGGTGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: APGPPPRSRTGR*SQTRRTPPGGK Trigger: CTTTCCACCTGGTGGTGTTCGGCGCGTCTGGCTTCACCGGCCAGTTCGTGACCGAGGAGGTGGCCCGGGAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS CAA 90 bp | CTAAACTCAATACCGTGTTTGTTGAGTCTGTCAATCAACTTTGTTTaGGAAAAAGCTGCTCCAGGTGTGAAGACCCCGCCCGCCTTAGGC | + |
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Preference number: 6 (lower is better) Translates to: LNSIPCLLSLSINFV*EKAAPGVKTPPALG Trigger: GCCTAAGGCGGGCGGGGTCTTCACACCTGGAGCAGCTTTTTCCAAAACAAAGTTGATTGACAGACTCAACAAACACGGTATTGAGTTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS CAA 72 bp | ATACCGTGTTTGTTGAGTCTGTCAATCAACTTTGTTTaGGAAAAAGCTGCTCCAGGTGTGAAGACCCCGCCC | + |
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Preference number: 6 (lower is better) Translates to: IPCLLSLSINFV*EKAAPGVKTPP Trigger: GGGCGGGGTCTTCACACCTGGAGCAGCTTTTTCCAAAACAAAGTTGATTGACAGACTCAACAAACACGGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS TCA 72 bp | ATTAGCAATATCACAGATGATGATTCCAACTTCAGATaGCAGTGTTGGTCTTCCCAGCTTCAGGGCCGCCTT | + |
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Preference number: 6 (lower is better) Translates to: ISNITDDDSNFR*QCWSSQLQGRL Trigger: AAGGCGGCCCTGAAGCTGGGAAGACCAACACTGTCATCTGAAGTTGGAATCATCATCTGTGATATTGCTAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS TCA 72 bp | GATCTGCTGGAATGGAGTCAAAGCCGCTGCTTCCAATaGTATAAACCCCTTTGTCTGCAGCTTTCTCATGAT | + |
|
Preference number: 6 (lower is better) Translates to: DLLEWSQSRCFQ*YKPLCLQLSHD Trigger: ATCATGAGAAAGCTGCAGACAAAGGGGTTTATATCATTGGAAGCAGCGGCTTTGACTCCATTCCAGCAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS TCA 72 bp | TTGTTCTTATCTGTACCAGTGCCTTGGCTGTATCCTTaGCCAAAGAATGTCAGCGTGAATGAGGCAGCATCA | + |
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Preference number: 6 (lower is better) Translates to: LFLSVPVPWLYP*PKNVSVNEAAS Trigger: TGATGCTGCCTCATTCACGCTGACATTCTTTGGTCAAGGATACAGCCAAGGCACTGGTACAGATAAGAACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS GCA 72 bp | AAACCGATATGGTCCTACGCAATTGAGGACAACTGTTaGCTGTTTAGCCATTTCATCAAGCGAGGCTGGATT | + |
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Preference number: 6 (lower is better) Translates to: KPIWSYAIEDNC*LFSHFIKRGWI Trigger: AATCCAGCCTCGCTTGATGAAATGGCTAAACAGGCAACAGTTGTCCTCAATTGCGTAGGACCATATCGGTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS TCA 72 bp | TCAGTTGCATTAGTTCCAGAAACTGAGGTTCTCCACTaGTGTCGATACAACTGGCTCCATTTTCAATACATG | + |
|
Preference number: 6 (lower is better) Translates to: SVALVPETEVLH*CRYNWLHFQYM Trigger: CATGTATTGAAAATGGAGCCAGTTGTATCGACATCAGTGGAGAACCTCAGTTTCTGGAACTAATGCAACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS CCA 72 bp | AACTGTTGCCTGTTTAGCCATTTCATCAAGCGAGGCTaGATTAGCAATATCACAGATGATGATTCCAACTTC | + |
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Preference number: 6 (lower is better) Translates to: NCCLFSHFIKRG*ISNITDDDSNF Trigger: GAAGTTGGAATCATCATCTGTGATATTGCTAATCCAGCCTCGCTTGATGAAATGGCTAAACAGGCAACAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS TCA 72 bp | AAGAAATTGGCCACCTTCTCTTCAATTTTGGACCAATaGGCGGGACAGGTTTCAGATTTGATACATTTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: KKLATFSSILDQ*AGQVSDLIHFL Trigger: TAAGAAATGTATCAAATCTGAAACCTGTCCCGCTCATTGGTCCAAAATTGAAGAGAAGGTGGCCAATTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS GCA 72 bp | ATTCATTTTATTTCTGGTATATATTACTCCCAGATCTaGTGGAATGGAGTCAAAGCCGCTGCTTCCAATGAT | + |
|
Preference number: 6 (lower is better) Translates to: IHFISGIYYSQI*WNGVKAAASND Trigger: ATCATTGGAAGCAGCGGCTTTGACTCCATTCCAGCAGATCTGGGAGTAATATATACCAGAAATAAAATGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS CCA 72 bp | CATTTTATTTCTGGTATATATTACTCCCAGATCTGCTaGAATGGAGTCAAAGCCGCTGCTTCCAATGATATA | + |
|
Preference number: 6 (lower is better) Translates to: HFISGIYYSQIC*NGVKAAASNDI Trigger: TATATCATTGGAAGCAGCGGCTTTGACTCCATTCCAGCAGATCTGGGAGTAATATATACCAGAAATAAAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS CAA 72 bp | GTTTTCTCAAATTACTCTGATCTCCAAAACCATAAATaGCTGACTTCCAGGTACCATCATGAATGCTCAACC | + |
|
Preference number: 6 (lower is better) Translates to: VFSNYSDLQNHK*LTSRYHHECST Trigger: GGTTGAGCATTCATGATGGTACCTGGAAGTCAGCAATTTATGGTTTTGGAGATCAGAGTAATTTGAGAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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| CDS CAA 72 bp | TCAGAGCTGCTAATAACACTAAACTCAATACCGTGTTaGTTGAGTCTGTCAATCAACTTTGTTTTGGAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: SELLITLNSIPC*LSLSINFVLEK Trigger: TTTTTCCAAAACAAAGTTGATTGACAGACTCAACAAACACGGTATTGAGTTTAGTGTTATTAGCAGCTCTGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000366510.4 |
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