Pregenerated sensors for SBK3 (Homo sapiens)
Ensembl gene IDs: ENSG00000231274Ensembl transcript IDs: ENST00000592464.1, ENST00000612221.1
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | CCAAGCCCAGCGTTCCGTAGGGAGAGTGCAATGTGTTCCCTCTCTGTCCTCCCGTGGGGGAAGGGCCTCTaGCCCAGGCTCTGGCCACCT | + |
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Preference number: 2 (lower is better) Translates to: PSPAFRRESAMCSLSVLPWGKGL*PRLWPP Trigger: AGGTGGCCAGAGCCTGGGCCAGAGGCCCTTCCCCCA...CGGGAGGACAGAGAGGGAACACATTGCACTCTCCCTACGGAACGCTGGGCTTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| 3UTR-3UTR GCA 90 bp | GAGCTGGGCTCTTGGGTCCTCAGTTGGAAGAGGAATGCGCGTCCAAGCCCAGCGCTCTGTCCTCCCGGGTaGAGCTGTCTCTCCATCCAG | + |
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Preference number: 2 (lower is better) Translates to: ELGSWVLSWKRNARPSPALCPPG*SCLSIQ Trigger: CTGGATGGAGAGACAGCTGCACCCGGGAGGACAGAG...CGCTGGGCTTGGACGCGCATTCCTCTTCCAACTGAGGACCCAAGAGCCCAGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CCA 90 bp | GGAGCTGGGCTCTTGGGTCCTCAGTTGGAAGAGGAATGCGCGTCCAAGCCCAGCGGTCGGGCTGCCCTCTaGCCGGGTCAGACCCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: GAGLLGPQLEEECASKPSGRAAL*PGQTQV Trigger: GACCTGGGTCTGACCCGGCCAGAGGGCAGCCCGACC...GCTGGGCTTGGACGCGCATTCCTCTTCCAACTGAGGACCCAAGAGCCCAGCTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR GCA 90 bp | GAGCTGGGCTCTTGGGTCCTCAGTTGGAAGAGGAATGCGCGTCCAAGCCCAGCGCAGCAGGCCTGGGTGTaGAGAGACGCAGCGGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: ELGSWVLSWKRNARPSPAQQAWV*RDAAAH Trigger: GTGGGCCGCTGCGTCTCTGCACACCCAGGCCTGCTG...CGCTGGGCTTGGACGCGCATTCCTCTTCCAACTGAGGACCCAAGAGCCCAGCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CCA 90 bp | GCGCGTCCAAGCCCAGCGTTCCGTAGGGAGAGTGCAATGTGTTCCCTCTCTGTCGCTCAGGCGGTGCCGTaGGCAGAGGCACTGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: ARPSPAFRRESAMCSLSVAQAVP*AEALVG Trigger: CCCCACCAGTGCCTCTGCCCACGGCACCGCCTGAGC...GACAGAGAGGGAACACATTGCACTCTCCCTACGGAACGCTGGGCTTGGACGCGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CCA 90 bp | GAGCTGGGCTCTTGGGTCCTCAGTTGGAAGAGGAATGCGCGTCCAAGCCCAGCGTGGGGGAAGGGCCTCTaGCCCAGGCTCTGGCCACCT | + |
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Preference number: 4 (lower is better) Translates to: ELGSWVLSWKRNARPSPAWGKGL*PRLWPP Trigger: AGGTGGCCAGAGCCTGGGCCAGAGGCCCTTCCCCCA...CGCTGGGCTTGGACGCGCATTCCTCTTCCAACTGAGGACCCAAGAGCCCAGCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR GCA 90 bp | GGAGCTGGGCTCTTGGGTCCTCAGTTGGAAGAGGAATGCGCGTCCAAGCCCAGCGGGAGGCCCCTTTCCTaGAGCATCCCGCTGAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: GAGLLGPQLEEECASKPSGRPLS*SIPLRS Trigger: GGACCTCAGCGGGATGCTGCAGGAAAGGGGCCTCCC...GCTGGGCTTGGACGCGCATTCCTCTTCCAACTGAGGACCCAAGAGCCCAGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR GCA 90 bp | GGAGCTGGGCTCTTGGGTCCTCAGTTGGAAGAGGAATGCGCGTCCAAGCCCAGCACAGAGCTCAGGCGGTaGCGTGGGCAGAGGCACTGG | + |
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Preference number: 4 (lower is better) Translates to: GAGLLGPQLEEECASKPSTELRR*RGQRHW Trigger: CCAGTGCCTCTGCCCACGGCACCGCCTGAGCTCTGT...GCTGGGCTTGGACGCGCATTCCTCTTCCAACTGAGGACCCAAGAGCCCAGCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CCA 90 bp | GGAAGAGGAATGCGCGTCCAAGCCCAGCGTTCCGTAGGGAGAGTGCAATGTGTTCGTGGGCAGAGGCACTaGTGGGGCGGGGGTCGGGCT | + |
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Preference number: 4 (lower is better) Translates to: GRGMRVQAQRSVGRVQCVRGQRH*WGGGRA Trigger: AGCCCGACCCCCGCCCCACCAGTGCCTCTGCCCACG...AACACATTGCACTCTCCCTACGGAACGCTGGGCTTGGACGCGCATTCCTCTTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CCA 90 bp | GCAGGAGCTGGGCTCTTGGGTCCTCAGTTGGAAGAGGAATGCGCGTCCAAGCCCAGGTCCAGAAGCCCCTaGAGCAAGGCCAGGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: AGAGLLGPQLEEECASKPRSRSP*SKARAG Trigger: CCCAGCCCTGGCCTTGCTCCAGGGGCTTCTGGACCT...GGGCTTGGACGCGCATTCCTCTTCCAACTGAGGACCCAAGAGCCCAGCTCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR GCA 90 bp | GCAGGAGCTGGGCTCTTGGGTCCTCAGTTGGAAGAGGAATGCGCGTCCAAGCCCCCCTCTCTGTTCCCTTaGAACCCCCAGTCGTCCCCC | + |
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Preference number: 4 (lower is better) Translates to: AGAGLLGPQLEEECASKPPSLFP*NPQSSP Trigger: GGGGGACGACTGGGGGTTGCAAGGGAACAGAGAGGG...GGGCTTGGACGCGCATTCCTCTTCCAACTGAGGACCCAAGAGCCCAGCTCCTGC 63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CCA 90 bp | TCTTGGGTCCTCAGTTGGAAGAGGAATGCGCGTCCAAGCCCAGCGTTCCGTAGGCCGGGGTCACCCTGCTaGTCGTCAGCTCCACCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SWVLSWKRNARPSPAFRRPGSPC*SSAPPA Trigger: GGCTGGTGGAGCTGACGACCAGCAGGGTGACCCCGG...CCTACGGAACGCTGGGCTTGGACGCGCATTCCTCTTCCAACTGAGGACCCAAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CCA 90 bp | CGTCCAAGCCCAGCGTTCCGTAGGGAGAGTGCAATGTGTTCCCTCTCTGTCCTCCCAGGAGTCCACGGCTaGCCGCAGAGGCAGGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: RPSPAFRRESAMCSLSVLPGVHG*PQRQGV Trigger: GACACCCTGCCTCTGCGGCCAGCCGTGGACTCCTGG...GAGGACAGAGAGGGAACACATTGCACTCTCCCTACGGAACGCTGGGCTTGGACG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CCA 90 bp | GGAGCTGGGCTCTTGGGTCCTCAGTTGGAAGAGGAATGCGCGTCCAAGCCCAGCGAGGTGGCTGAGGCTTaGTGGTCACCCAGCCAGCGA | + |
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Preference number: 4 (lower is better) Translates to: GAGLLGPQLEEECASKPSEVAEA*WSPSQR Trigger: TCGCTGGCTGGGTGACCACCAAGCCTCAGCCACCTC...GCTGGGCTTGGACGCGCATTCCTCTTCCAACTGAGGACCCAAGAGCCCAGCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CCA 90 bp | CAAGCCCAGCGTTCCGTAGGGAGAGTGCAATGTGTTCCCTCTCTGTCCTCCCGGGTCCAGGACAGCCAGTaGGGGGCTCCTAGTCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: QAQRSVGRVQCVPSLSSRVQDSQ*GAPSLG Trigger: CCCGAGACTAGGAGCCCCCCACTGGCTGTCCTGGAC...CCGGGAGGACAGAGAGGGAACACATTGCACTCTCCCTACGGAACGCTGGGCTTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR TCA 90 bp | GCAGGAGCTGGGCTCTTGGGTCCTCAGTTGGAAGAGGAATGCGCGTCCAAGCCCAGCCCAGCTTCCGGATaGGGTGGTACTGGTCCCGAA | + |
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Preference number: 4 (lower is better) Translates to: AGAGLLGPQLEEECASKPSPASG*GGTGPE Trigger: TTCGGGACCAGTACCACCTCATCCGGAAGCTGGGCT...GGGCTTGGACGCGCATTCCTCTTCCAACTGAGGACCCAAGAGCCCAGCTCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR GCA 90 bp | CAGGAGCTGGGCTCTTGGGTCCTCAGTTGGAAGAGGAATGCGCGTCCAAGCCCAGAAGTCCAGAGCTCCTaGCAACTGGGCCACCACCCG | + |
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Preference number: 4 (lower is better) Translates to: QELGSWVLSWKRNARPSPEVQSS*QLGHHP Trigger: CGGGTGGTGGCCCAGTTGGCAGGAGCTCTGGACTTC...TGGGCTTGGACGCGCATTCCTCTTCCAACTGAGGACCCAAGAGCCCAGCTCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CCA 90 bp | GCGCGTCCAAGCCCAGCGTTCCGTAGGGAGAGTGCAATGTGTTCCCTCTCTGTCAGCTCCACCAGCCGTTaGAGGGCTGTGGCTGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: ARPSPAFRRESAMCSLSVSSTSR*RAVAVS Trigger: GGACACAGCCACAGCCCTCCAACGGCTGGTGGAGCT...GACAGAGAGGGAACACATTGCACTCTCCCTACGGAACGCTGGGCTTGGACGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CCA 90 bp | CCAAGCCCAGCGTTCCGTAGGGAGAGTGCAATGTGTTCCCTCTCTGTCCTCCCGGGCTGTGTCCTCCTCTaGGTCCCCATCCTCAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: PSPAFRRESAMCSLSVLPGCVLL*VPILRG Trigger: ACCCCTGAGGATGGGGACCCAGAGGAGGACACAGCC...CGGGAGGACAGAGAGGGAACACATTGCACTCTCCCTACGGAACGCTGGGCTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CCA 90 bp | AGAGGAATGCGCGTCCAAGCCCAGCGTTCCGTAGGGAGAGTGCAATGTGTTCCCGGTCTGCAGCAGGCCTaGGTGTGCAGAGACGCAGCG | + |
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Preference number: 4 (lower is better) Translates to: RGMRVQAQRSVGRVQCVPGLQQA*VCRDAA Trigger: CGCTGCGTCTCTGCACACCCAGGCCTGCTGCAGACC...GGGAACACATTGCACTCTCCCTACGGAACGCTGGGCTTGGACGCGCATTCCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CCA 90 bp | CAAGCCCAGCGTTCCGTAGGGAGAGTGCAATGTGTTCCCTCTCTGTCCTCCCGGACCAGCCCCCGGCTGTaGAGGAAGTCCAGAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: QAQRSVGRVQCVPSLSSRTSPRL*RKSRAP Trigger: AGGAGCTCTGGACTTCCTCCACAGCCGGGGGCTGGT...CCGGGAGGACAGAGAGGGAACACATTGCACTCTCCCTACGGAACGCTGGGCTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CCA 90 bp | AGCTGGGCTCTTGGGTCCTCAGTTGGAAGAGGAATGCGCGTCCAAGCCCAGCGTGGTTTGACATCTGCGTaGACCAGCCCCCGGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: SWALGSSVGRGMRVQAQRGLTSA*TSPRLW Trigger: CCACAGCCGGGGGCTGGTCCACGCAGATGTCAAACC...ACGCTGGGCTTGGACGCGCATTCCTCTTCCAACTGAGGACCCAAGAGCCCAGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CCA 90 bp | GGAAGAGGAATGCGCGTCCAAGCCCAGCGTTCCGTAGGGAGAGTGCAATGTGTTGCTGGGGGCGCAAACTaGTCCCAGGGTGGTGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: GRGMRVQAQRSVGRVQCVAGGAN*SQGGGG Trigger: GCCACCACCACCCTGGGACCAGTTTGCGCCCCCAGC...AACACATTGCACTCTCCCTACGGAACGCTGGGCTTGGACGCGCATTCCTCTTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CCA 90 bp | TCTTGGGTCCTCAGTTGGAAGAGGAATGCGCGTCCAAGCCCAGCGTTCCGTAGGGAGCAAGGCCAGGGCTaGGGGCGCAAACTGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: SWVLSWKRNARPSPAFRREQGQG*GRKLVP Trigger: TGGGACCAGTTTGCGCCCCCAGCCCTGGCCTTGCTC...CCTACGGAACGCTGGGCTTGGACGCGCATTCCTCTTCCAACTGAGGACCCAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR GCA 90 bp | GGAATGCGCGTCCAAGCCCAGCGTTCCGTAGGGAGAGTGCAATGTGTTCCCTCTTCACCGGGGTCACCCTaGTGGTCGTCAGCTCCACCA | + |
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Preference number: 4 (lower is better) Translates to: GMRVQAQRSVGRVQCVPSSPGSP*WSSAPP Trigger: TGGTGGAGCTGACGACCAGCAGGGTGACCCCGGTGA...AGAGGGAACACATTGCACTCTCCCTACGGAACGCTGGGCTTGGACGCGCATTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR GCA 90 bp | CAGGAGCTGGGCTCTTGGGTCCTCAGTTGGAAGAGGAATGCGCGTCCAAGCCCAGTCAGGTTTGACATCTaGGTGGACCAGCCCCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: QELGSWVLSWKRNARPSPVRFDI*VDQPPA Trigger: AGCCGGGGGCTGGTCCACGCAGATGTCAAACCTGAC...TGGGCTTGGACGCGCATTCCTCTTCCAACTGAGGACCCAAGAGCCCAGCTCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR GCA 90 bp | TGGAAGAGGAATGCGCGTCCAAGCCCAGCGTTCCGTAGGGAGAGTGCAATGTGTCCAGGGCCACACGGCTaGAGACCGGGTCGAAGACCA | + |
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Preference number: 4 (lower is better) Translates to: WKRNARPSPAFRRESAMCPGPHG*RPGRRP Trigger: TGGTCTTCGACCCGGTCTGCAGCCGTGTGGCCCTGG...ACACATTGCACTCTCCCTACGGAACGCTGGGCTTGGACGCGCATTCCTCTTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CCA 90 bp | CCAAGCCCAGCGTTCCGTAGGGAGAGTGCAATGTGTTCCCTCTCTGTCCTCCCGCGGATGAGGTGGTACTaGTCCCGAAGGCTCCTCACC | + |
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Preference number: 4 (lower is better) Translates to: PSPAFRRESAMCSLSVLPRMRWY*SRRLLT Trigger: GGTGAGGAGCCTTCGGGACCAGTACCACCTCATCCG...CGGGAGGACAGAGAGGGAACACATTGCACTCTCCCTACGGAACGCTGGGCTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CCA 90 bp | TGGAAGAGGAATGCGCGTCCAAGCCCAGCGTTCCGTAGGGAGAGTGCAATGTGTCCTCGAACTCAGGGTTaGGGGCCAGTGCCACGTCCC | + |
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Preference number: 4 (lower is better) Translates to: WKRNARPSPAFRRESAMCPRTQG*GPVPRP Trigger: GGGACGTGGCACTGGCCCCCAACCCTGAGTTCGAGG...ACACATTGCACTCTCCCTACGGAACGCTGGGCTTGGACGCGCATTCCTCTTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR GCA 90 bp | AGAGGAATGCGCGTCCAAGCCCAGCGTTCCGTAGGGAGAGTGCAATGTGTTCCCAGGGTTGGGGGCCAGTaGCACGTCCCAAGGGAAACA | + |
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Preference number: 4 (lower is better) Translates to: RGMRVQAQRSVGRVQCVPRVGGQ*HVPRET Trigger: TGTTTCCCTTGGGACGTGGCACTGGCCCCCAACCCT...GGGAACACATTGCACTCTCCCTACGGAACGCTGGGCTTGGACGCGCATTCCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR GCA 90 bp | CGTCCAAGCCCAGCGTTCCGTAGGGAGAGTGCAATGTGTTCCCTCTCTGTCCTCCTCTGTCCTCCCGGGTaGAGCTGTCTCTCCATCCAG | + |
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Preference number: 4 (lower is better) Translates to: RPSPAFRRESAMCSLSVLLCPPG*SCLSIQ Trigger: CTGGATGGAGAGACAGCTGCACCCGGGAGGACAGAG...GAGGACAGAGAGGGAACACATTGCACTCTCCCTACGGAACGCTGGGCTTGGACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CCA 90 bp | CAAGCCCAGCGTTCCGTAGGGAGAGTGCAATGTGTTCCCTCTCTGTCCTCCCGGAGCTTCCGGATGAGGTaGTACTGGTCCCGAAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: QAQRSVGRVQCVPSLSSRSFRMR*YWSRRL Trigger: GAGCCTTCGGGACCAGTACCACCTCATCCGGAAGCT...CCGGGAGGACAGAGAGGGAACACATTGCACTCTCCCTACGGAACGCTGGGCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CCA 90 bp | CAAGCCCAGCGTTCCGTAGGGAGAGTGCAATGTGTTCCCTCTCTGTCCTCCCGGCTTCACCAGCAGTTCTaGGAGGCCCCTTTCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: QAQRSVGRVQCVPSLSSRLHQQF*EAPFLQ Trigger: CTGCAGGAAAGGGGCCTCCCAGAACTGCTGGTGAAG...CCGGGAGGACAGAGAGGGAACACATTGCACTCTCCCTACGGAACGCTGGGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CCA 90 bp | GGAATGCGCGTCCAAGCCCAGCGTTCCGTAGGGAGAGTGCAATGTGTTCCCTCTTGGTGGTGGCTGAGGTaGCTGAGGCTTGGTGGTCAC | + |
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Preference number: 4 (lower is better) Translates to: GMRVQAQRSVGRVQCVPSWWWLR*LRLGGH Trigger: GTGACCACCAAGCCTCAGCCACCTCAGCCACCACCA...AGAGGGAACACATTGCACTCTCCCTACGGAACGCTGGGCTTGGACGCGCATTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CCA 90 bp | TCTTGGGTCCTCAGTTGGAAGAGGAATGCGCGTCCAAGCCCAGCGTTCCGTAGGCCTGTCTCTGTCACCTaGTCAGGGAGCTCCCCCATC | + |
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Preference number: 4 (lower is better) Translates to: SWVLSWKRNARPSPAFRRPVSVT*SGSSPI Trigger: GATGGGGGAGCTCCCTGACCAGGTGACAGAGACAGG...CCTACGGAACGCTGGGCTTGGACGCGCATTCCTCTTCCAACTGAGGACCCAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CCA 90 bp | CGTCCAAGCCCAGCGTTCCGTAGGGAGAGTGCAATGTGTTCCCTCTCTGTCCTCCAGGAGCTGGGCTCTTaGGTCCTCAGTTGGAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: RPSPAFRRESAMCSLSVLQELGS*VLSWKR Trigger: CCTCTTCCAACTGAGGACCCAAGAGCCCAGCTCCTG...GAGGACAGAGAGGGAACACATTGCACTCTCCCTACGGAACGCTGGGCTTGGACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR TCA 90 bp | AAGAGGAATGCGCGTCCAAGCCCAGCGTTCCGTAGGGAGAGTGCAATGTGTTCCGCACGTTGTCAGGTTTaGCATCTGCGTGGACCAGCC | + |
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Preference number: 4 (lower is better) Translates to: KRNARPSPAFRRESAMCSARCQV*HLRGPA Trigger: GGCTGGTCCACGCAGATGTCAAACCTGACAACGTGC...GGAACACATTGCACTCTCCCTACGGAACGCTGGGCTTGGACGCGCATTCCTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR GCA 90 bp | GGAGCTGGGCTCTTGGGTCCTCAGTTGGAAGAGGAATGCGCGTCCAAGCCCAGCTCCTCCCACCACTTTTaGTGTCATCACCCTCATCTG | + |
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Preference number: 4 (lower is better) Translates to: GAGLLGPQLEEECASKPSSSHHF*CHHPHL Trigger: CAGATGAGGGTGATGACAGCAAAAGTGGTGGGAGGA...GCTGGGCTTGGACGCGCATTCCTCTTCCAACTGAGGACCCAAGAGCCCAGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR GCA 90 bp | GCTCTTGGGTCCTCAGTTGGAAGAGGAATGCGCGTCCAAGCCCAGCGTTCCGTAACTCCCTCAGGAAGGTaGTTCTCAGGACCAAATCCC | + |
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Preference number: 4 (lower is better) Translates to: ALGSSVGRGMRVQAQRSVTPSGR*FSGPNP Trigger: GGGATTTGGTCCTGAGAAGCACCTTCCTGAGGGAGT...TACGGAACGCTGGGCTTGGACGCGCATTCCTCTTCCAACTGAGGACCCAAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS TCA 90 bp | GGGCAAGGAGCACGCGGCCGTAGGAGCCGGAGCCCAGCTTCCGGATaGGGTGGTACTGGTCCCGAAGGCTCCTCACCGGGGTCACCCTGC | + |
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Preference number: 5 (lower is better) Translates to: GQGARGRRSRSPASG*GGTGPEGSSPGSPC Trigger: GCAGGGTGACCCCGGTGAGGAGCCTTCGGGACCAGTACCACCTCATCCGGAAGCTGGGCTCCGGCTCCTACGGCCGCGTGCTCCTTGCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000592464.1 ENST00000612221.1 |
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| CDS CCA 90 bp | CAGGGCTGGGGGCGCAAACTGGTCCCAGGGTGGTGGTGGCTGAGGTaGCTGAGGCTTGGTGGTCACCCAGCCAGCGAAGGCCTCGAACTC | + |
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Preference number: 5 (lower is better) Translates to: QGWGRKLVPGWWWLR*LRLGGHPASEGLEL Trigger: GAGTTCGAGGCCTTCGCTGGCTGGGTGACCACCAAGCCTCAGCCACCTCAGCCACCACCACCCTGGGACCAGTTTGCGCCCCCAGCCCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS GCA 90 bp | ATCTGCGTGGACCAGCCCCCGGCTGTGGAGGAAGTCCAGAGCTCCTaGCAACTGGGCCACCACCCGCTTCACCAGCAGTTCTGGGAGGCC | + |
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Preference number: 5 (lower is better) Translates to: ICVDQPPAVEEVQSS*QLGHHPLHQQFWEA Trigger: GGCCTCCCAGAACTGCTGGTGAAGCGGGTGGTGGCCCAGTTGGCAGGAGCTCTGGACTTCCTCCACAGCCGGGGGCTGGTCCACGCAGAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS CCA 90 bp | GAGGCTTGGTGGTCACCCAGCCAGCGAAGGCCTCGAACTCAGGGTTaGGGGCCAGTGCCACGTCCCAAGGGAAACAGGCAGTGGCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: EAWWSPSQRRPRTQG*GPVPRPKGNRQWQH Trigger: GTGCTGCCACTGCCTGTTTCCCTTGGGACGTGGCACTGGCCCCCAACCCTGAGTTCGAGGCCTTCGCTGGCTGGGTGACCACCAAGCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS CCA 90 bp | GGGAAGGGCCTCTGGCCCAGGCTCTGGCCACCTGTCTCTGTCACCTaGTCAGGGAGCTCCCCCATCTGTCCCCGTCCTCCCACCACTTTT | + |
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Preference number: 5 (lower is better) Translates to: GKGLWPRLWPPVSVT*SGSSPICPRPPTTF Trigger: AAAAGTGGTGGGAGGACGGGGACAGATGGGGGAGCTCCCTGACCAGGTGACAGAGACAGGTGGCCAGAGCCTGGGCCAGAGGCCCTTCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CAA 90 bp | GCAGGAGCTGGGCTCTTGGGTCCTCAGTTGGAAGAGGAATGCGCGTCCAAGCCCCAGCTCCACCAGCCGTaGGAGGGCTGTGGCTGTGTC | + |
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Preference number: 5 (lower is better) Translates to: AGAGLLGPQLEEECASKPQLHQP*EGCGCV Trigger: GACACAGCCACAGCCCTCCAACGGCTGGTGGAGCTG...GGGCTTGGACGCGCATTCCTCTTCCAACTGAGGACCCAAGAGCCCAGCTCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS TCA 90 bp | CCACACGGCTGCAGACCGGGTCGAAGACCAGCACGTTGTCAGGTTTaGCATCTGCGTGGACCAGCCCCCGGCTGTGGAGGAAGTCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: PHGCRPGRRPARCQV*HLRGPAPGCGGSPE Trigger: CTCTGGACTTCCTCCACAGCCGGGGGCTGGTCCACGCAGATGTCAAACCTGACAACGTGCTGGTCTTCGACCCGGTCTGCAGCCGTGTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS GCA 90 bp | GCTGCAGACCGGGTCGAAGACCAGCACGTTGTCAGGTTTGACATCTaGGTGGACCAGCCCCCGGCTGTGGAGGAAGTCCAGAGCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: AADRVEDQHVVRFDI*VDQPPAVEEVQSSC Trigger: GCAGGAGCTCTGGACTTCCTCCACAGCCGGGGGCTGGTCCACGCAGATGTCAAACCTGACAACGTGCTGGTCTTCGACCCGGTCTGCAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS GCA 90 bp | GGTCACCCAGCCAGCGAAGGCCTCGAACTCAGGGTTGGGGGCCAGTaGCACGTCCCAAGGGAAACAGGCAGTGGCAGCACAGAAGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: GHPASEGLELRVGGQ*HVPRETGSGSTEEK Trigger: CTTCTCTTCTGTGCTGCCACTGCCTGTTTCCCTTGGGACGTGGCACTGGCCCCCAACCCTGAGTTCGAGGCCTTCGCTGGCTGGGTGACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS CCA 90 bp | CAGACCGGGTCGAAGACCAGCACGTTGTCAGGTTTGACATCTGCGTaGACCAGCCCCCGGCTGTGGAGGAAGTCCAGAGCTCCTGCCAAC | + |
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Preference number: 5 (lower is better) Translates to: QTGSKTSTLSGLTSA*TSPRLWRKSRAPAN Trigger: GTTGGCAGGAGCTCTGGACTTCCTCCACAGCCGGGGGCTGGTCCACGCAGATGTCAAACCTGACAACGTGCTGGTCTTCGACCCGGTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CAA 90 bp | TGGAAGAGGAATGCGCGTCCAAGCCCAGCGTTCCGTAGGGAGAGTGCAATGTGTGCCTCGAACTCAGGGTaGGGGGCCAGTGCCACGTCC | + |
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Preference number: 5 (lower is better) Translates to: WKRNARPSPAFRRESAMCASNSG*GASATS Trigger: GGACGTGGCACTGGCCCCCAACCCTGAGTTCGAGGC...ACACATTGCACTCTCCCTACGGAACGCTGGGCTTGGACGCGCATTCCTCTTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CAA 90 bp | CCAAGCCCAGCGTTCCGTAGGGAGAGTGCAATGTGTTCCCTCTCTGTCCTCCCGGCAGGAGCTGGGCTCTaGGGTCCTCAGTTGGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: PSPAFRRESAMCSLSVLPAGAGL*GPQLEE Trigger: CTCTTCCAACTGAGGACCCAAGAGCCCAGCTCCTGC...CGGGAGGACAGAGAGGGAACACATTGCACTCTCCCTACGGAACGCTGGGCTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS TCA 90 bp | CTCTCTCCACCGTCCTCTTCCCCTGTGCATCCCGCTGTGTGTTTCTaGGTCCAATTCTCTGGGGGCCTTGGTCTCGCTGTGTGTCCTTGG | + |
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Preference number: 5 (lower is better) Translates to: LSPPSSSPVHPAVCF*VQFSGGLGLAVCPW Trigger: CCAAGGACACACAGCGAGACCAAGGCCCCCAGAGAATTGGACTCAGAAACACACAGCGGGATGCACAGGGGAAGAGGACGGTGGAGAGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592464.1 |
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| CDS-3UTR CAA 90 bp | TCTTGGGTCCTCAGTTGGAAGAGGAATGCGCGTCCAAGCCCAGCGTTCCGTAGGAGCACGTTGTCAGGTTaGACATCTGCGTGGACCAGC | + |
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Preference number: 5 (lower is better) Translates to: SWVLSWKRNARPSPAFRRSTLSG*TSAWTS Trigger: GCTGGTCCACGCAGATGTCAAACCTGACAACGTGCT...CCTACGGAACGCTGGGCTTGGACGCGCATTCCTCTTCCAACTGAGGACCCAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS-3UTR CAA 90 bp | TGGAAGAGGAATGCGCGTCCAAGCCCAGCGTTCCGTAGGGAGAGTGCAATGTGTCTCTTGGGTCCTCAGTaGGAAGAGGAATGCGCGTCC | + |
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Preference number: 5 (lower is better) Translates to: WKRNARPSPAFRRESAMCLLGPQ*EEECAS Trigger: GGACGCGCATTCCTCTTCCAACTGAGGACCCAAGAG...ACACATTGCACTCTCCCTACGGAACGCTGGGCTTGGACGCGCATTCCTCTTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS CCA 90 bp | CTCTTCCCCTGTGCATCCCGCTGTGTGTTTCTGAGTCCAATTCTCTaGGGGCCTTGGTCTCGCTGTGTGTCCTTGGATCTCTGTCATCCT | + |
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Preference number: 5 (lower is better) Translates to: LFPCASRCVFLSPIL*GPWSRCVSLDLCHP Trigger: AGGATGACAGAGATCCAAGGACACACAGCGAGACCAAGGCCCCCAGAGAATTGGACTCAGAAACACACAGCGGGATGCACAGGGGAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000592464.1 |
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| CDS CCA 72 bp | CAGAGGCACTGGTGGGGCGGGGGTCGGGCTGCCCTCTaGCCGGGTCAGACCCAGGTCTCCCAGGGCCACACG | + |
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Preference number: 6 (lower is better) Translates to: QRHWWGGGRAAL*PGQTQVSQGHT Trigger: CGTGTGGCCCTGGGAGACCTGGGTCTGACCCGGCCAGAGGGCAGCCCGACCCCCGCCCCACCAGTGCCTCTG 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS TCA 72 bp | GCACGCGGCCGTAGGAGCCGGAGCCCAGCTTCCGGATaGGGTGGTACTGGTCCCGAAGGCTCCTCACCGGGG | + |
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Preference number: 6 (lower is better) Translates to: ARGRRSRSPASG*GGTGPEGSSPG Trigger: CCCCGGTGAGGAGCCTTCGGGACCAGTACCACCTCATCCGGAAGCTGGGCTCCGGCTCCTACGGCCGCGTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000592464.1 ENST00000612221.1 |
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| CDS GCA 72 bp | GGTACTGGTCCCGAAGGCTCCTCACCGGGGTCACCCTaGTGGTCGTCAGCTCCACCAGCCGTTGGAGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: GTGPEGSSPGSP*WSSAPPAVGGL Trigger: CAGCCCTCCAACGGCTGGTGGAGCTGACGACCAGCAGGGTGACCCCGGTGAGGAGCCTTCGGGACCAGTACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000592464.1 ENST00000612221.1 |
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| CDS CCA 72 bp | ACTGGTCCCGAAGGCTCCTCACCGGGGTCACCCTGCTaGTCGTCAGCTCCACCAGCCGTTGGAGGGCTGTGG | + |
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Preference number: 6 (lower is better) Translates to: TGPEGSSPGSPC*SSAPPAVGGLW Trigger: CCACAGCCCTCCAACGGCTGGTGGAGCTGACGACCAGCAGGGTGACCCCGGTGAGGAGCCTTCGGGACCAGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000592464.1 ENST00000612221.1 |
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| CDS CCA 72 bp | GGGCGCAAACTGGTCCCAGGGTGGTGGTGGCTGAGGTaGCTGAGGCTTGGTGGTCACCCAGCCAGCGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: GRKLVPGWWWLR*LRLGGHPASEG Trigger: GCCTTCGCTGGCTGGGTGACCACCAAGCCTCAGCCACCTCAGCCACCACCACCCTGGGACCAGTTTGCGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS CCA 72 bp | GGGCTCCTAGTCTCGGGATCCAGGTCCAGAAGCCCCTaGAGCAAGGCCAGGGCTGGGGGCGCAAACTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: GLLVSGSRSRSP*SKARAGGANWS Trigger: GGACCAGTTTGCGCCCCCAGCCCTGGCCTTGCTCCAGGGGCTTCTGGACCTGGATCCCGAGACTAGGAGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS CCA 72 bp | CTCTGGCCCAGGCTCTGGCCACCTGTCTCTGTCACCTaGTCAGGGAGCTCCCCCATCTGTCCCCGTCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: LWPRLWPPVSVT*SGSSPICPRPP Trigger: GGGAGGACGGGGACAGATGGGGGAGCTCCCTGACCAGGTGACAGAGACAGGTGGCCAGAGCCTGGGCCAGAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS CAA 90 bp | TCTCCCAGGGCCACACGGCTGCAGACCGGGTCGAAGACCAGCACGTaGTCAGGTTTGACATCTGCGTGGACCAGCCCCCGGCTGTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: SPRATRLQTGSKTST*SGLTSAWTSPRLWR Trigger: CCTCCACAGCCGGGGGCTGGTCCACGCAGATGTCAAACCTGACAACGTGCTGGTCTTCGACCCGGTCTGCAGCCGTGTGGCCCTGGGAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS CCA 72 bp | TGGTCACCCAGCCAGCGAAGGCCTCGAACTCAGGGTTaGGGGCCAGTGCCACGTCCCAAGGGAAACAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: WSPSQRRPRTQG*GPVPRPKGNRQ Trigger: CTGCCTGTTTCCCTTGGGACGTGGCACTGGCCCCCAACCCTGAGTTCGAGGCCTTCGCTGGCTGGGTGACCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS CAA 72 bp | GCCACACGGCTGCAGACCGGGTCGAAGACCAGCACGTaGTCAGGTTTGACATCTGCGTGGACCAGCCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: ATRLQTGSKTST*SGLTSAWTSPR Trigger: CCGGGGGCTGGTCCACGCAGATGTCAAACCTGACAACGTGCTGGTCTTCGACCCGGTCTGCAGCCGTGTGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS CAA 72 bp | GTGGTCACCCAGCCAGCGAAGGCCTCGAACTCAGGGTaGGGGGCCAGTGCCACGTCCCAAGGGAAACAGGCA | + |
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Preference number: 6 (lower is better) Translates to: VVTQPAKASNSG*GASATSQGKQA Trigger: TGCCTGTTTCCCTTGGGACGTGGCACTGGCCCCCAACCCTGAGTTCGAGGCCTTCGCTGGCTGGGTGACCAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS CAA 72 bp | CTGCAGACCGGGTCGAAGACCAGCACGTTGTCAGGTTaGACATCTGCGTGGACCAGCCCCCGGCTGTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LQTGSKTSTLSG*TSAWTSPRLWR Trigger: CCTCCACAGCCGGGGGCTGGTCCACGCAGATGTCAAACCTGACAACGTGCTGGTCTTCGACCCGGTCTGCAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS CAA 90 bp | GCCACACGGCTGCAGACCGGGTCGAAGACCAGCACGTTGTCAGGTTaGACATCTGCGTGGACCAGCCCCCGGCTGTGGAGGAAGTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: ATRLQTGSKTSTLSG*TSAWTSPRLWRKSR Trigger: TCTGGACTTCCTCCACAGCCGGGGGCTGGTCCACGCAGATGTCAAACCTGACAACGTGCTGGTCTTCGACCCGGTCTGCAGCCGTGTGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS TCA 72 bp | TGCAGACCGGGTCGAAGACCAGCACGTTGTCAGGTTTaGCATCTGCGTGGACCAGCCCCCGGCTGTGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: CRPGRRPARCQV*HLRGPAPGCGG Trigger: TCCTCCACAGCCGGGGGCTGGTCCACGCAGATGTCAAACCTGACAACGTGCTGGTCTTCGACCCGGTCTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS GCA 72 bp | CGGGTCGAAGACCAGCACGTTGTCAGGTTTGACATCTaGGTGGACCAGCCCCCGGCTGTGGAGGAAGTCCAG | + |
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Preference number: 6 (lower is better) Translates to: RVEDQHVVRFDI*VDQPPAVEEVQ Trigger: CTGGACTTCCTCCACAGCCGGGGGCTGGTCCACGCAGATGTCAAACCTGACAACGTGCTGGTCTTCGACCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS CAA 90 bp | CCTGGTCAGGGAGCTCCCCCATCTGTCCCCGTCCTCCCACCACTTTaGCTGTCATCACCCTCATCTGTCCACTCCTCCAGGCTTGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: PGQGAPPSVPVLPPL*LSSPSSVHSSRLEP Trigger: AGGCTCAAGCCTGGAGGAGTGGACAGATGAGGGTGATGACAGCAAAAGTGGTGGGAGGACGGGGACAGATGGGGGAGCTCCCTGACCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS CAA 72 bp | GGAGCTCCCCCATCTGTCCCCGTCCTCCCACCACTTTaGCTGTCATCACCCTCATCTGTCCACTCCTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: GAPPSVPVLPPL*LSSPSSVHSSR Trigger: CCTGGAGGAGTGGACAGATGAGGGTGATGACAGCAAAAGTGGTGGGAGGACGGGGACAGATGGGGGAGCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS TCA 72 bp | CCGTCCTCTTCCCCTGTGCATCCCGCTGTGTGTTTCTaGGTCCAATTCTCTGGGGGCCTTGGTCTCGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: PSSSPVHPAVCF*VQFSGGLGLAV Trigger: CACAGCGAGACCAAGGCCCCCAGAGAATTGGACTCAGAAACACACAGCGGGATGCACAGGGGAAGAGGACGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592464.1 |
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| CDS GCA 72 bp | AGACGCAGCGGCCCACACAGAACTCCCTCAGGAAGGTaGTTCTCAGGACCAAATCCCGACGCAGGAGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: RRSGPHRTPSGR*FSGPNPDAGAS Trigger: TGAAGCTCCTGCGTCGGGATTTGGTCCTGAGAAGCACCTTCCTGAGGGAGTTCTGTGTGGGCCGCTGCGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS CCA 72 bp | TCGAAGACCAGCACGTTGTCAGGTTTGACATCTGCGTaGACCAGCCCCCGGCTGTGGAGGAAGTCCAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: SKTSTLSGLTSA*TSPRLWRKSRA Trigger: AGCTCTGGACTTCCTCCACAGCCGGGGGCTGGTCCACGCAGATGTCAAACCTGACAACGTGCTGGTCTTCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000612221.1 |
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| CDS GCA 72 bp | CTCCCTGGTCTCTCTCTCCACCGTCCTCTTCCCCTGTaGATCCCGCTGTGTGTTTCTGAGTCCAATTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: LPGLSLHRPLPL*IPLCVSESNSL Trigger: CAGAGAATTGGACTCAGAAACACACAGCGGGATGCACAGGGGAAGAGGACGGTGGAGAGAGAGACCAGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000592464.1 |
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| CDS CAA 90 bp | CTGTGCATCCCGCTGTGTGTTTCTGAGTCCAATTCTCTGGGGGCCTaGGTCTCGCTGTGTGTCCTTGGATCTCTGTCATCCTCTCTCCCT | + |
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Preference number: 6 (lower is better) Translates to: LCIPLCVSESNSLGA*VSLCVLGSLSSSLP Trigger: AGGGAGAGAGGATGACAGAGATCCAAGGACACACAGCGAGACCAAGGCCCCCAGAGAATTGGACTCAGAAACACACAGCGGGATGCACAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000592464.1 |
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