RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SAMD9L (Homo sapiens)

Ensembl gene IDs: ENSG00000177409

Ensembl transcript IDs: ENST00000318238.9, ENST00000411955.5, ENST00000414791.5, ENST00000437805.5, ENST00000439952.5, ENST00000446033.1, ENST00000446959.5, ENST00000477816.1, ENST00000610760.1

Found 287 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTaGGGAGAGTGTTATGTGGTGGATGGGGAACAATATATTTACCTT +
Preference number: 1 (lower is better)
Translates to: SVCVCVCVCVCVCVC*GECYVVDGEQYIYL
Trigger: AAGGTAAATATATTGTTCCCCATCCACCACATAACACTCTCCCCAACACACACACACACACACACACACACACACACACACACACACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
3UTR-3UTR GCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATATTGACTCCACTTTGTaGCAAGCTCTGCGGGTAGGC +
Preference number: 2 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHIDSTL*QALRVG
Trigger: GCCTACCCGCAGAGCTTGGCACAAAGTGGAGTCAAT...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
3UTR-3UTR GCA 90 bp GGAGAGTGTTATGTGGTGGATGGGGAACAATATATTTACCTTCCACATAAGTTTATTGACTCCACTTTGTaGCAAGCTCTGCGGGTAGGC +
Preference number: 2 (lower is better)
Translates to: GECYVVDGEQYIYLPHKFIDSTL*QALRVG
Trigger: GCCTACCCGCAGAGCTTGGCACAAAGTGGAGTCAAT...AAACTTATGTGGAAGGTAAATATATTGTTCCCCATCCACCACATAACACTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
3UTR-3UTR CCA 90 bp ATAGCAGGAGAGAGAATGTTAGATGGAAATAAGGCAATCTCAACAGAGAGAACAATAAGCCAGGGGAGATaGGATCTAAGAAACAGGTGG +
Preference number: 2 (lower is better)
Translates to: IAGERMLDGNKAISTERTISQGR*DLRNRW
Trigger: CCACCTGTTTCTTAGATCCCATCTCCCCTGGCTTAT...TGTTCTCTCTGTTGAGATTGCCTTATTTCCATCTAACATTCTCTCTCCTGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
3UTR-3UTR CCA 90 bp ATAGCAGGAGAGAGAATGTTAGATGGAAATAAGGCAATCTCAACAGAGAGAACAAATAGAACTCTGGTGTaGATCTGTGGGTTTGAGTCC +
Preference number: 2 (lower is better)
Translates to: IAGERMLDGNKAISTERTNRTLV*ICGFES
Trigger: GGACTCAAACCCACAGATCCACACCAGAGTTCTATT...TGTTCTCTCTGTTGAGATTGCCTTATTTCCATCTAACATTCTCTCTCCTGCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318238.9
3UTR-3UTR CCA 90 bp ATAGCAGGAGAGAGAATGTTAGATGGAAATAAGGCAATCTCAACAGAGAGAACAGGGGAGAGTGTTATGTaGTGGATGGGGAACAATATA +
Preference number: 2 (lower is better)
Translates to: IAGERMLDGNKAISTERTGESVM*WMGNNI
Trigger: TATATTGTTCCCCATCCACCACATAACACTCTCCCC...TGTTCTCTCTGTTGAGATTGCCTTATTTCCATCTAACATTCTCTCTCCTGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318238.9
3UTR-3UTR TCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGAAAACATTAAAAGATTaGCTCCACTTTGTGCCAAGC +
Preference number: 2 (lower is better)
Translates to: QDEVNRTLVWICGFESNKKTLKD*LHFVPS
Trigger: GCTTGGCACAAAGTGGAGTCAATCTTTTAATGTTTT...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
3UTR-3UTR TCA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACCCTATAGACAGTTATaGTGTGACCAGTGGATATCA +
Preference number: 2 (lower is better)
Translates to: NRTLVWICGFESNKLSLLPYRQL*CDQWIS
Trigger: TGATATCCACTGGTCACATCATAACTGTCTATAGGG...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
3UTR-3UTR TCA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTCCCTATAGACAGTTATaGTGTGACCAGTGGATATCA +
Preference number: 2 (lower is better)
Translates to: CGSVGLSPISFLFYIHLIPYRQL*CDQWIS
Trigger: TGATATCCACTGGTCACATCATAACTGTCTATAGGG...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
3UTR-3UTR TCA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTAAAACATTAAAAGATTaGCTCCACTTTGTGCCAAGC +
Preference number: 2 (lower is better)
Translates to: CGSVGLSPISFLFYIHLIKTLKD*LHFVPS
Trigger: GCTTGGCACAAAGTGGAGTCAATCTTTTAATGTTTT...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
3UTR-3UTR CAA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTAAGATTGACTCCACTTaGTGCCAAGCTCTGCGGGTA +
Preference number: 3 (lower is better)
Translates to: EVNRTLVWICGFESNKLSKIDST*CQALRV
Trigger: TACCCGCAGAGCTTGGCACAAAGTGGAGTCAATCTT...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
3UTR-3UTR CAA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATAAGATTGACTCCACTTaGTGCCAAGCTCTGCGGGTA +
Preference number: 3 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHKIDST*CQALRV
Trigger: TACCCGCAGAGCTTGGCACAAAGTGGAGTCAATCTT...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
3UTR TCA 72 bp TCTCAACAGAGAGAACAGCATGTATATAGCACAGGTTaGGAAGTAAAGGGAACAAAGAGGGTAATGAATGGA +
Preference number: 3 (lower is better)
Translates to: SQQREQHVYSTG*EVKGTKRVMNG
Trigger: TCCATTCATTACCCTCTTTGTTCCCTTTACTTCTCAACCTGTGCTATATACATGCTGTTCTCTCTGTTGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR GCA 90 bp ATAGCAGGAGAGAGAATGTTAGATGGAAATAAGGCAATCTCAACAGAGAGAACAGCTCAGAATCCCAGCTaGAGCCCAGCAGGCCCACCC +
Preference number: 4 (lower is better)
Translates to: IAGERMLDGNKAISTERTAQNPS*SPAGPP
Trigger: GGGTGGGCCTGCTGGGCTGCAGCTGGGATTCTGAGC...TGTTCTCTCTGTTGAGATTGCCTTATTTCCATCTAACATTCTCTCTCCTGCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR GCA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTAGCTCAGAATCCCAGCTaGAGCCCAGCAGGCCCACCC +
Preference number: 4 (lower is better)
Translates to: NRTLVWICGFESNKLSLLAQNPS*SPAGPP
Trigger: GGGTGGGCCTGCTGGGCTGCAGCTGGGATTCTGAGC...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGAGCTTGCCTTCAGCCTaGCCAGTTAGACGACGCAGG +
Preference number: 4 (lower is better)
Translates to: QDEVNRTLVWICGFESNKSLPSA*PVRRRR
Trigger: CCTGCGTCGTCTAACTGGTCAGGCTGAAGGCAAGCT...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACCAGCAGGCCCACCCCTaGTCTGATCCTCTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: IELWCGSVGLSPISFLFYQQAHP*SDPLCS
Trigger: GCTACACAGAGGATCAGAGCAGGGGTGGGCCTGCTG...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGGCTTTCATTTTGGCCTaGCGTGCCCAGTCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: QDEVNRTLVWICGFESNKAFILA*RAQSRA
Trigger: AGCTCTGGACTGGGCACGTCAGGCCAAAATGAAAGC...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATTCTCTCCTGGAGCAATaGGCTGGGAGAAGGGCAAGG +
Preference number: 4 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHSLLEQ*AGRRAR
Trigger: CCTTGCCCTTCTCCCAGCTCATTGCTCCAGGAGAGA...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR GCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTCACTCACTTTCCGTaGCTCCGGGAAAGGATGCTC +
Preference number: 4 (lower is better)
Translates to: QDEVNRTLVWICGFESNKLTHFP*LRERML
Trigger: GAGCATCCTTTCCCGGAGGCACGGAAAGTGAGTGAG...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTCACTCACTTTCCGTaGCTCCGGGAAAGGATGCTC +
Preference number: 4 (lower is better)
Translates to: EVNRTLVWICGFESNKLSLTHFP*LRERML
Trigger: GAGCATCCTTTCCCGGAGGCACGGAAAGTGAGTGAG...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp TTGAGAACACATATTACCATGAGGAAGCCCTCTAATCAGGCAGGAATGATGGTGAAAAGTGTGCTTGCCTaGTTGGACCTGCACATGCGC +
Preference number: 4 (lower is better)
Translates to: LRTHITMRKPSNQAGMMVKSVLA*LDLHMR
Trigger: GCGCATGTGCAGGTCCAAGCAGGCAAGCACACTTTT...CACCATCATTCCTGCCTGATTAGAGGGCTTCCTCATGGTAATATGTGTTCTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CCA 90 bp TTGAGAACACATATTACCATGAGGAAGCCCTCTAATCAGGCAGGAATGATGGTGGACACCACTACCACCTaGTCCAAGCCTTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: LRTHITMRKPSNQAGMMVDTTTT*SKPSSS
Trigger: AGATGAGGAAGGCTTGGACCAGGTGGTAGTGGTGTC...CACCATCATTCCTGCCTGATTAGAGGGCTTCCTCATGGTAATATGTGTTCTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGGTGTGCTTGCCTGCTTaGACCTGCACATGCGCTTGT +
Preference number: 4 (lower is better)
Translates to: QDEVNRTLVWICGFESNKVCLPA*TCTCAC
Trigger: ACAAGCGCATGTGCAGGTCCAAGCAGGCAAGCACAC...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp TTGAGAACACATATTACCATGAGGAAGCCCTCTAATCAGGCAGGAATGATGGTGCTGGGACTTCTGTGGTaGCCAGTTCTCGGTTTCATA +
Preference number: 4 (lower is better)
Translates to: LRTHITMRKPSNQAGMMVLGLLW*PVLGFI
Trigger: TATGAAACCGAGAACTGGTCACCACAGAAGTCCCAG...CACCATCATTCCTGCCTGATTAGAGGGCTTCCTCATGGTAATATGTGTTCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR TCA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTTCTGGAAAGCAGCTATaGGGAAGCAGAGCTGACACC +
Preference number: 4 (lower is better)
Translates to: EVNRTLVWICGFESNKLSSGKQL*GSRADT
Trigger: GGTGTCAGCTCTGCTTCCTCATAGCTGCTTTCCAGA...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411955.5
CDS-3UTR GCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCATTTTGGCCTGACGTaGCCAGTCCAGAGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: QDEVNRTLVWICGFESNKHFGLT*PVQSCV
Trigger: AACACAGCTCTGGACTGGGCACGTCAGGCCAAAATG...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTATTGACTCCACTTTGTaGCAAGCTCTGCGGGTAGGC +
Preference number: 4 (lower is better)
Translates to: EVNRTLVWICGFESNKLSIDSTL*QALRVG
Trigger: GCCTACCCGCAGAGCTTGGCACAAAGTGGAGTCAAT...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGGACACCACTACCACCTaGTCCAAGCCTTCCTCATCT +
Preference number: 4 (lower is better)
Translates to: QDEVNRTLVWICGFESNKDTTTT*SKPSSS
Trigger: AGATGAGGAAGGCTTGGACCAGGTGGTAGTGGTGTC...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATTCTGGAAAGCAGCTATaGGGAAGCAGAGCTGTAGGC +
Preference number: 4 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHSGKQL*GSRAVG
Trigger: GCCTACAGCTCTGCTTCCTCATAGCTGCTTTCCAGA...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR TCA 90 bp TTGAGAACACATATTACCATGAGGAAGCCCTCTAATCAGGCAGGAATGATGGTGCCCAGAAAGTTTCAATaGGTGGATCTCCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: LRTHITMRKPSNQAGMMVPRKFQ*VDLLGF
Trigger: AAAGCCCAGGAGATCCACTCATTGAAACTTTCTGGG...CACCATCATTCCTGCCTGATTAGAGGGCTTCCTCATGGTAATATGTGTTCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR GCA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTTCCACAGACACAGTCTaGTCGGGTGAGATGCAATAC +
Preference number: 4 (lower is better)
Translates to: EVNRTLVWICGFESNKLSSTDTV*SGEMQY
Trigger: GTATTGCATCTCACCCGAGCAGACTGTGTCTGTGGA...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR GCA 90 bp GGAGAGTGTTATGTGGTGGATGGGGAACAATATATTTACCTTCCACATAAGTTTCCTTTGCTGGGAAGCTaGTCTTCTGGCAAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: GECYVVDGEQYIYLPHKFPLLGS*SSGKGL
Trigger: AAGCCCCTTGCCAGAAGAGCAGCTTCCCAGCAAAGG...AAACTTATGTGGAAGGTAAATATATTGTTCCCCATCCACCACATAACACTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR GCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATGCTGTTTTCACCCTCTaGCTTTGCTGGGAAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHAVFTL*LCWEAA
Trigger: AGCAGCTTCCCAGCAAAGGCAGAGGGTGAAAACAGC...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR GCA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTCAGCAGGCCCACCCCTaGTCTGATCCTCTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: CGSVGLSPISFLFYIHLIQQAHP*SDPLCS
Trigger: GCTACACAGAGGATCAGAGCAGGGGTGGGCCTGCTG...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACTTGCCTGCTTGGACCTaGACATGCGCTTGTACTGTC +
Preference number: 4 (lower is better)
Translates to: IELWCGSVGLSPISFLFYLPAWT*TCACTV
Trigger: GACAGTACAAGCGCATGTGCAGGTCCAAGCAGGCAA...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCCAGATAGAAAAGTGTaGTTGCCTGCTTGGACCTGC +
Preference number: 4 (lower is better)
Translates to: QDEVNRTLVWICGFESNKPDRKV*LPAWTC
Trigger: GCAGGTCCAAGCAGGCAAGCACACTTTTCTATCTGG...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACGGGAAGCTGCTCTTCTaGCAAGGGGCTTACACTTTC +
Preference number: 4 (lower is better)
Translates to: IELWCGSVGLSPISFLFYGKLLF*QGAYTF
Trigger: GAAAGTGTAAGCCCCTTGCCAGAAGAGCAGCTTCCC...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGACACAGCGTTTTCCCTaGAGGAGGTCCCTTTTGACT +
Preference number: 4 (lower is better)
Translates to: QDEVNRTLVWICGFESNKTQRFP*RRSLLT
Trigger: AGTCAAAAGGGACCTCCTCCAGGGAAAACGCTGTGT...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CCA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTAGTGTGCTTGCCTGCTTaGACCTGCACATGCGCTTGT +
Preference number: 4 (lower is better)
Translates to: NRTLVWICGFESNKLSLLVCLPA*TCTCAC
Trigger: ACAAGCGCATGTGCAGGTCCAAGCAGGCAAGCACAC...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACGTTCTCCCAGTACTCTaGCTTTCTGAGGGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: IELWCGSVGLSPISFLFYVLPVL*LSEGVS
Trigger: TGACACACCCTCAGAAAGTCAGAGTACTGGGAGAAC...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR TCA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCACAGTCTGCTCGGGTaGGATGCAATACCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: EVNRTLVWICGFESNKLSHSLLG*DAIPSF
Trigger: AAAAGAAGGTATTGCATCTCACCCGAGCAGACTGTG...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR TCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGAAGCCAGGAAGGAAATaGGTTGTGCTTCCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QDEVNRTLVWICGFESNKKPGRK*VVLPCC
Trigger: ACAGCAAGGAAGCACAACTCATTTCCTTCCTGGCTT...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp GGAGAGTGTTATGTGGTGGATGGGGAACAATATATTTACCTTCCACATAAGTTTAGGGCAATCAGAGGGTaGATGATACGCACACCTGTG +
Preference number: 4 (lower is better)
Translates to: GECYVVDGEQYIYLPHKFRAIRG*MIRTPV
Trigger: CACAGGTGTGCGTATCATTCACCCTCTGATTGCCCT...AAACTTATGTGGAAGGTAAATATATTGTTCCCCATCCACCACATAACACTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR TCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTGGGACTTCTGTGGTaGCCAGTTCTCGGTTTCATA +
Preference number: 4 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHLGLLW*PVLGFI
Trigger: TATGAAACCGAGAACTGGTCACCACAGAAGTCCCAG...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTAGCGTGGTAAGTGGTTaGATTAACTTGGAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: EVNRTLVWICGFESNKLSSVVSG*INLELG
Trigger: GCCCAACTCCAAGTTAATTCAACCACTTACCACGCT...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGAGCGTGGTAAGTGGTTaGATTAACTTGGAGTTGGGC +
Preference number: 4 (lower is better)
Translates to: QDEVNRTLVWICGFESNKSVVSG*INLELG
Trigger: GCCCAACTCCAAGTTAATTCAACCACTTACCACGCT...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTAGCTTGCCTTCAGCCTaGCCAGTTAGACGACGCAGG +
Preference number: 4 (lower is better)
Translates to: CGSVGLSPISFLFYIHLISLPSA*PVRRRR
Trigger: CCTGCGTCGTCTAACTGGTCAGGCTGAAGGCAAGCT...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp GGAGAGTGTTATGTGGTGGATGGGGAACAATATATTTACCTTCCACATAAGTTTCATTTTGGCCTGACGTaGCCAGTCCAGAGCTGTGTT +
Preference number: 4 (lower is better)
Translates to: GECYVVDGEQYIYLPHKFHFGLT*PVQSCV
Trigger: AACACAGCTCTGGACTGGGCACGTCAGGCCAAAATG...AAACTTATGTGGAAGGTAAATATATTGTTCCCCATCCACCACATAACACTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR GCA 90 bp GGAGAGTGTTATGTGGTGGATGGGGAACAATATATTTACCTTCCACATAAGTTTTTGCCTGCTTGGACCTaGACATGCGCTTGTACTGTC +
Preference number: 4 (lower is better)
Translates to: GECYVVDGEQYIYLPHKFLPAWT*TCACTV
Trigger: GACAGTACAAGCGCATGTGCAGGTCCAAGCAGGCAA...AAACTTATGTGGAAGGTAAATATATTGTTCCCCATCCACCACATAACACTCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR GCA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTAAAAAGTGTGCTTGCCTaGTTGGACCTGCACATGCGC +
Preference number: 4 (lower is better)
Translates to: NRTLVWICGFESNKLSLLKSVLA*LDLHMR
Trigger: GCGCATGTGCAGGTCCAAGCAGGCAAGCACACTTTT...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCAACTTCTTCCTCACTaGGCTCACTCACTCACTTTC +
Preference number: 4 (lower is better)
Translates to: EVNRTLVWICGFESNKLSQLLPH*AHSLTF
Trigger: GAAAGTGAGTGAGTGAGCCCAGTGAGGAAGAAGTTG...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp TTGAGAACACATATTACCATGAGGAAGCCCTCTAATCAGGCAGGAATGATGGTGAATAGAACTCTGGTGTaGATCTGTGGGTTTGAGTCC +
Preference number: 4 (lower is better)
Translates to: LRTHITMRKPSNQAGMMVNRTLV*ICGFES
Trigger: GGACTCAAACCCACAGATCCACACCAGAGTTCTATT...CACCATCATTCCTGCCTGATTAGAGGGCTTCCTCATGGTAATATGTGTTCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR TCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATGTCTCATTCCTCTTCTaGTGGCTAGGAGACATGAAG +
Preference number: 4 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHVSFLF*WLGDMK
Trigger: CTTCATGTCTCCTAGCCATCAGAAGAGGAATGAGAC...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCCCTCTTGCTGTTATTaGTCTCTTCAGGGACTTCTC +
Preference number: 4 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHPSCCY*SLQGLL
Trigger: GAGAAGTCCCTGAAGAGATCAATAACAGCAAGAGGG...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp TTGAGAACACATATTACCATGAGGAAGCCCTCTAATCAGGCAGGAATGATGGTGCTGTTACTTCTTCACTaGGCAGAATTTGCCCGTATT +
Preference number: 4 (lower is better)
Translates to: LRTHITMRKPSNQAGMMVLLLLH*AEFARI
Trigger: AATACGGGCAAATTCTGCTCAGTGAAGAAGTAACAG...CACCATCATTCCTGCCTGATTAGAGGGCTTCCTCATGGTAATATGTGTTCTCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR TCA 90 bp TTGAGAACACATATTACCATGAGGAAGCCCTCTAATCAGGCAGGAATGATGGTGAGGCAGCCTTACTGGTaGTTTTCACACCAACAATTT +
Preference number: 4 (lower is better)
Translates to: LRTHITMRKPSNQAGMMVRQPYW*FSHQQF
Trigger: AAATTGTTGGTGTGAAAATCACCAGTAAGGCTGCCT...CACCATCATTCCTGCCTGATTAGAGGGCTTCCTCATGGTAATATGTGTTCTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR TCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTCGCTTTTCAGGTCTaGTCTGCCGTTGCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHLAFQV*SAVAEN
Trigger: ATTTTCTGCAACGGCAGATCAGACCTGAAAAGCGAG...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACAAGCCAGGAAGGAAATaGGTTGTGCTTCCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: IELWCGSVGLSPISFLFYKPGRK*VVLPCC
Trigger: ACAGCAAGGAAGCACAACTCATTTCCTTCCTGGCTT...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGTGTTCCTACCACTTCTaGGTGGACCTGAATAAACAG +
Preference number: 4 (lower is better)
Translates to: QDEVNRTLVWICGFESNKCSYHF*VDLNKQ
Trigger: CTGTTTATTCAGGTCCACTCAGAAGTGGTAGGAACA...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGGAACACATATTACCATaGGGAAGCCCTCTAATCAGG +
Preference number: 4 (lower is better)
Translates to: QDEVNRTLVWICGFESNKEHILP*GSPLIR
Trigger: CCTGATTAGAGGGCTTCCTCATGGTAATATGTGTTC...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR GCA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTGGTCCTTGTTCAGTTTaGCGGAGGATATACTTGTTG +
Preference number: 4 (lower is better)
Translates to: EVNRTLVWICGFESNKLSGPCSV*RRIYLL
Trigger: CAACAAGTATATCCTCCGGCAAACTGAACAAGGACC...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR GCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTCCAAAATGGATGGTaGCATTGGTGCGTGAATTCA +
Preference number: 4 (lower is better)
Translates to: QDEVNRTLVWICGFESNKLQNGW*HWCVNS
Trigger: TGAATTCACGCACCAATGGCACCATCCATTTTGGAG...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGTTTTCAGGTCTGATCTaGCGTTGCAGAAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: QDEVNRTLVWICGFESNKFSGLI*RCRKSS
Trigger: GCTGGATTTTCTGCAACGGCAGATCAGACCTGAAAA...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGATCCTGATGGCTCTTTaGCCTATAGGTGACCAGATT +
Preference number: 4 (lower is better)
Translates to: QDEVNRTLVWICGFESNKILMAL*PIGDQI
Trigger: AATCTGGTCACCTATAGGGCAAAGAGCCATCAGGAT...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTATAGAAAAGTGTGCTTaGCTGCTTGGACCTGCACAT +
Preference number: 4 (lower is better)
Translates to: EVNRTLVWICGFESNKLSIEKCA*LLGPAH
Trigger: ATGTGCAGGTCCAAGCAGGCAAGCACACTTTTCTAT...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACCAGATAGAAAAGTGTaGTTGCCTGCTTGGACCTGC +
Preference number: 4 (lower is better)
Translates to: NRTLVWICGFESNKLSLLPDRKV*LPAWTC
Trigger: GCAGGTCCAAGCAGGCAAGCACACTTTTCTATCTGG...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACCAGCCAGTCTCTCTCTaGAAATGCAGGATTTTCCTG +
Preference number: 4 (lower is better)
Translates to: IELWCGSVGLSPISFLFYQPVSL*KCRIFL
Trigger: CAGGAAAATCCTGCATTTCCAGAGAGAGACTGGCTG...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGGAAAGTTTCAATGAGTaGATCTCCTGGGCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: QDEVNRTLVWICGFESNKESFNE*ISWAFH
Trigger: GTGGAAAGCCCAGGAGATCCACTCATTGAAACTTTC...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATATGTCATATCGTCTCTaGGACTTCTGTGGTGACCAG +
Preference number: 4 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHMSYRL*DFCGDQ
Trigger: CTGGTCACCACAGAAGTCCCAGAGACGATATGACAT...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCCAGAGGGCCTTCAATaGAAAATCCTAGGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: EVNRTLVWICGFESNKLSPEGLQ*KILGRK
Trigger: CTTTCTACCTAGGATTTTCCATTGAAGGCCCTCTGG...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTCTCACAGTCACCGAATaGGGCCATTTCTCACACAGC +
Preference number: 4 (lower is better)
Translates to: CGSVGLSPISFLFYIHLILTVTE*GHFSHS
Trigger: GCTGTGTGAGAAATGGCCTCATTCGGTGACTGTGAG...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR TCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATAATATACCCAGCATTTaGCTACCTGACACCACTACC +
Preference number: 4 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHNIPSI*LPDTTT
Trigger: GGTAGTGGTGTCAGGTAGTCAAATGCTGGGTATATT...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR TCA 90 bp ATAGCAGGAGAGAGAATGTTAGATGGAAATAAGGCAATCTCAACAGAGAGAACAAATTGTCCCGGATCATaGTTGTCACTTTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: IAGERMLDGNKAISTERTNCPGS*LSLSGD
Trigger: GTCCCCTGAAAGTGACAATCATGATCCGGGACAATT...TGTTCTCTCTGTTGAGATTGCCTTATTTCCATCTAACATTCTCTCTCCTGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR TCA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTAAATTGTCCCGGATCATaGTTGTCACTTTCAGGGGAC +
Preference number: 4 (lower is better)
Translates to: NRTLVWICGFESNKLSLLNCPGS*LSLSGD
Trigger: GTCCCCTGAAAGTGACAATCATGATCCGGGACAATT...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGTGGCTGTCATGGAACTaGTCAAAAGGATATGGCATA +
Preference number: 4 (lower is better)
Translates to: QDEVNRTLVWICGFESNKWLSWN*SKGYGI
Trigger: TATGCCATATCCTTTTGATCAGTTCCATGACAGCCA...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACTCGCTTTTCAGGTCTaGTCTGCCGTTGCAGAAAAT +
Preference number: 4 (lower is better)
Translates to: NRTLVWICGFESNKLSLLLAFQV*SAVAEN
Trigger: ATTTTCTGCAACGGCAGATCAGACCTGAAAAGCGAG...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACCCAGAAAGTTTCAATaGGTGGATCTCCTGGGCTTT +
Preference number: 4 (lower is better)
Translates to: NRTLVWICGFESNKLSLLPRKFQ*VDLLGF
Trigger: AAAGCCCAGGAGATCCACTCATTGAAACTTTCTGGG...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp GGAGAGTGTTATGTGGTGGATGGGGAACAATATATTTACCTTCCACATAAGTTTCAATCAGAGGGTGAATaGTACGCACACCTGTGTATC +
Preference number: 4 (lower is better)
Translates to: GECYVVDGEQYIYLPHKFQSEGE*YAHLCI
Trigger: GATACACAGGTGTGCGTATCATTCACCCTCTGATTG...AAACTTATGTGGAAGGTAAATATATTGTTCCCCATCCACCACATAACACTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR TCA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACAATCAGAGGGTGAATaGTACGCACACCTGTGTATC +
Preference number: 4 (lower is better)
Translates to: NRTLVWICGFESNKLSLLQSEGE*YAHLCI
Trigger: GATACACAGGTGTGCGTATCATTCACCCTCTGATTG...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTAGGGCAATCAGAGGGTaGATGATACGCACACCTGTG +
Preference number: 4 (lower is better)
Translates to: CGSVGLSPISFLFYIHLIRAIRG*MIRTPV
Trigger: CACAGGTGTGCGTATCATTCACCCTCTGATTGCCCT...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGGCCTTTGGGATTCTTTaGAAGCTCTTGAGGCTTTTT +
Preference number: 4 (lower is better)
Translates to: QDEVNRTLVWICGFESNKAFGIL*KLLRLF
Trigger: AAAAAGCCTCAAGAGCTTTCAAAGAATCCCAAAGGC...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCCCTATAGACAGTTATaGTGTGACCAGTGGATATCA +
Preference number: 4 (lower is better)
Translates to: EVNRTLVWICGFESNKLSPYRQL*CDQWIS
Trigger: TGATATCCACTGGTCACATCATAACTGTCTATAGGG...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTTTCACCCTCTGCCTTTaGTGGGAAGCTGCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: CGSVGLSPISFLFYIHLIFTLCL*WEAALL
Trigger: CAGAAGAGCAGCTTCCCAGCAAAGGCAGAGGGTGAA...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR GCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTCCAAAATGGATGGTaGCATTGGTGCGTGAATTCA +
Preference number: 4 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHLQNGW*HWCVNS
Trigger: TGAATTCACGCACCAATGGCACCATCCATTTTGGAG...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGGATGGTGTATTGTTCTaGAGAAGGACTTCCACAAAC +
Preference number: 4 (lower is better)
Translates to: QDEVNRTLVWICGFESNKDGVLF*RRTSTN
Trigger: GTTTGTGGAAGTCCTTCTGCAGAACAATACACCATC...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTAAATCTACATCCCGTTaGTTGGAATTGGCCAGGATA +
Preference number: 4 (lower is better)
Translates to: EVNRTLVWICGFESNKLSKSTSR*LELARI
Trigger: TATCCTGGCCAATTCCAAGCAACGGGATGTAGATTT...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTTCCACCAGGATACTTTaGCACCTCGATAAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: EVNRTLVWICGFESNKLSSTRIL*HLDKSV
Trigger: AACACTTTTATCGAGGTGGCAAAGTATCCTGGTGGA...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATATCCTGATGGCTCTTTaGCCTATAGGTGACCAGATT +
Preference number: 4 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHILMAL*PIGDQI
Trigger: AATCTGGTCACCTATAGGGCAAAGAGCCATCAGGAT...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTCTAGCTTTTTCCTaGAATTCTCCTCCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: EVNRTLVWICGFESNKLSLLAFS*NSPPGV
Trigger: TACTCCAGGAGGAGAATTGCAGGAAAAAGCTAGAAG...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATAGAAAAGTGTGCTTaGCTGCTTGGACCTGCACAT +
Preference number: 4 (lower is better)
Translates to: IELWCGSVGLSPISFLFYIEKCA*LLGPAH
Trigger: ATGTGCAGGTCCAAGCAGGCAAGCACACTTTTCTAT...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACCACACATCCCCACTGTaGCAGAGGGAATTTGTATTT +
Preference number: 4 (lower is better)
Translates to: IELWCGSVGLSPISFLFYHTSPL*QREFVF
Trigger: AAATACAAATTCCCTCTGGCACAGTGGGGATGTGTG...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp ATAGCAGGAGAGAGAATGTTAGATGGAAATAAGGCAATCTCAACAGAGAGAACACAAGCTCTAGAATGCTaGTTGAGACTGTTCTGGCTG +
Preference number: 4 (lower is better)
Translates to: IAGERMLDGNKAISTERTQALEC*LRLFWL
Trigger: CAGCCAGAACAGTCTCAAGCAGCATTCTAGAGCTTG...TGTTCTCTCTGTTGAGATTGCCTTATTTCCATCTAACATTCTCTCTCCTGCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR GCA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACTTCCAAGCTCTAGAATaGTGCTTGAGACTGTTCTGG +
Preference number: 4 (lower is better)
Translates to: IELWCGSVGLSPISFLFYFQALE*CLRLFW
Trigger: CCAGAACAGTCTCAAGCAGCATTCTAGAGCTTGGAA...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CCA 90 bp GGAGAGTGTTATGTGGTGGATGGGGAACAATATATTTACCTTCCACATAAGTTTCAACTTCTTCCTCACTaGGCTCACTCACTCACTTTC +
Preference number: 4 (lower is better)
Translates to: GECYVVDGEQYIYLPHKFQLLPH*AHSLTF
Trigger: GAAAGTGAGTGAGTGAGCCCAGTGAGGAAGAAGTTG...AAACTTATGTGGAAGGTAAATATATTGTTCCCCATCCACCACATAACACTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCCAACAATTTCTCCATaGGGTTTGTCCTTGACTCCA +
Preference number: 4 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHPTISP*GLSLTP
Trigger: TGGAGTCAAGGACAAACCCCATGGAGAAATTGTTGG...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTTGGGATCAGGAGGAATaGTCCACTTTCCTGATAAAA +
Preference number: 4 (lower is better)
Translates to: EVNRTLVWICGFESNKLSWDQEE*STFLIK
Trigger: TTTTATCAGGAAAGTGGACCATTCCTCCTGATCCCA...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATAATAGAACTCTGGTGTaGATCTGTGGGTTTGAGTCC +
Preference number: 4 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHNRTLV*ICGFES
Trigger: GGACTCAAACCCACAGATCCACACCAGAGTTCTATT...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp GGAGAGTGTTATGTGGTGGATGGGGAACAATATATTTACCTTCCACATAAGTTTTGTGTGTGTGTGTGTTaGGGAGAGTGTTATGTGGTG +
Preference number: 4 (lower is better)
Translates to: GECYVVDGEQYIYLPHKFCVCVC*GECYVV
Trigger: CACCACATAACACTCTCCCCAACACACACACACACA...AAACTTATGTGGAAGGTAAATATATTGTTCCCCATCCACCACATAACACTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR TCA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACCTGTTACTTCTTCACTaGGCAGAATTTGCCCGTATT +
Preference number: 4 (lower is better)
Translates to: IELWCGSVGLSPISFLFYLLLLH*AEFARI
Trigger: AATACGGGCAAATTCTGCTCAGTGAAGAAGTAACAG...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATAGGCAGCCTTACTGGTaGTTTTCACACCAACAATTT +
Preference number: 4 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHRQPYW*FSHQQF
Trigger: AAATTGTTGGTGTGAAAATCACCAGTAAGGCTGCCT...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTAAGGCTTGACAAATaGATGCATTTTGTGGGAATC +
Preference number: 4 (lower is better)
Translates to: EVNRTLVWICGFESNKLSLRLDK*MHFVGI
Trigger: GATTCCCACAAAATGCATTCATTTGTCAAGCCTTAG...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp GGAGAGTGTTATGTGGTGGATGGGGAACAATATATTTACCTTCCACATAAGTTTTTCTTTGAAAGCTCTTaGGGCTTTTTCCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: GECYVVDGEQYIYLPHKFFFESS*GFFRSF
Trigger: GAAGCTGCGGAAAAAGCCTCAAGAGCTTTCAAAGAA...AAACTTATGTGGAAGGTAAATATATTGTTCCCCATCCACCACATAACACTCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR TCA 90 bp ATAGCAGGAGAGAGAATGTTAGATGGAAATAAGGCAATCTCAACAGAGAGAACAGCTTGTACTGTCCCCTaGAGGATCTATTTAAGGATG +
Preference number: 4 (lower is better)
Translates to: IAGERMLDGNKAISTERTACTVP*RIYLRM
Trigger: CATCCTTAAATAGATCCTTCAGGGGACAGTACAAGC...TGTTCTCTCTGTTGAGATTGCCTTATTTCCATCTAACATTCTCTCTCCTGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR TCA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTAGCTTGTACTGTCCCCTaGAGGATCTATTTAAGGATG +
Preference number: 4 (lower is better)
Translates to: NRTLVWICGFESNKLSLLACTVP*RIYLRM
Trigger: CATCCTTAAATAGATCCTTCAGGGGACAGTACAAGC...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp ATAGCAGGAGAGAGAATGTTAGATGGAAATAAGGCAATCTCAACAGAGAGAACATGTTCCTACCACTTCTaGGTGGACCTGAATAAACAG +
Preference number: 4 (lower is better)
Translates to: IAGERMLDGNKAISTERTCSYHF*VDLNKQ
Trigger: CTGTTTATTCAGGTCCACTCAGAAGTGGTAGGAACA...TGTTCTCTCTGTTGAGATTGCCTTATTTCCATCTAACATTCTCTCTCCTGCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR GCA 90 bp GGAGAGTGTTATGTGGTGGATGGGGAACAATATATTTACCTTCCACATAAGTTTAATGACCCAACTTTCTaGTGTGTCACTCACAGTCAC +
Preference number: 4 (lower is better)
Translates to: GECYVVDGEQYIYLPHKFNDPTF*CVTHSH
Trigger: GTGACTGTGAGTGACACAGCAGAAAGTTGGGTCATT...AAACTTATGTGGAAGGTAAATATATTGTTCCCCATCCACCACATAACACTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR GCA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTTCACTGAGCAGAATTTaGCCGTATTGCTCATTAATC +
Preference number: 4 (lower is better)
Translates to: EVNRTLVWICGFESNKLSSLSRI*PYCSLI
Trigger: GATTAATGAGCAATACGGGCAAATTCTGCTCAGTGA...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTATTTTCAGGTCTGATCTaGCGTTGCAGAAAATCCAGC +
Preference number: 4 (lower is better)
Translates to: NRTLVWICGFESNKLSLLFSGLI*RCRKSS
Trigger: GCTGGATTTTCTGCAACGGCAGATCAGACCTGAAAA...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACACTGTCTGCCAATTTTaGACTTTCATCTGGATTCCG +
Preference number: 4 (lower is better)
Translates to: IELWCGSVGLSPISFLFYTVCQF*TFIWIP
Trigger: CGGAATCCAGATGAAAGTGCAAAATTGGCAGACAGT...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACGAAGGAAATGAGTTGTaGTTCCTTGCTGTCAACATC +
Preference number: 4 (lower is better)
Translates to: IELWCGSVGLSPISFLFYEGNEL*FLAVNI
Trigger: GATGTTGACAGCAAGGAAGCACAACTCATTTCCTTC...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATGAAGGAAATGAGTTGTaGTTCCTTGCTGTCAACATC +
Preference number: 4 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHEGNEL*FLAVNI
Trigger: GATGTTGACAGCAAGGAAGCACAACTCATTTCCTTC...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGGAATCGTCTACTTCCTaGACTCAAGACCTTTTCAAT +
Preference number: 4 (lower is better)
Translates to: QDEVNRTLVWICGFESNKESSTS*TQDLFN
Trigger: ATTGAAAAGGTCTTGAGTGCAGGAAGTAGACGATTC...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTAGTCCTACAAATTaGAAGACCTCTCGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHLSPTN*KTSRSC
Trigger: ACAACTCCGAGAGGTCTTGCAATTTGTAGGACTAAG...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp GGAGAGTGTTATGTGGTGGATGGGGAACAATATATTTACCTTCCACATAAGTTTCACACATCCCCACTGTaGCAGAGGGAATTTGTATTT +
Preference number: 4 (lower is better)
Translates to: GECYVVDGEQYIYLPHKFHTSPL*QREFVF
Trigger: AAATACAAATTCCCTCTGGCACAGTGGGGATGTGTG...AAACTTATGTGGAAGGTAAATATATTGTTCCCCATCCACCACATAACACTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CCA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACGGTACCTCCACAGCCTaGATGATGATAAAGATTGAT +
Preference number: 4 (lower is better)
Translates to: IELWCGSVGLSPISFLFYGTSTA*MMIKID
Trigger: ATCAATCTTTATCATCATCCAGGCTGTGGAGGTACC...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACTTTTGCACTTTCATCTaGATTCCGGGATCTCATGCA +
Preference number: 4 (lower is better)
Translates to: IELWCGSVGLSPISFLFYFCTFI*IPGSHA
Trigger: TGCATGAGATCCCGGAATCCAGATGAAAGTGCAAAA...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGAATGAATGCATTTTGTaGGAATCGTCTACTTCCTGC +
Preference number: 4 (lower is better)
Translates to: QDEVNRTLVWICGFESNKNECIL*ESSTSC
Trigger: GCAGGAAGTAGACGATTCCCACAAAATGCATTCATT...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATTGGGATCAGGAGGAATaGTCCACTTTCCTGATAAAA +
Preference number: 4 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHWDQEE*STFLIK
Trigger: TTTTATCAGGAAAGTGGACCATTCCTCCTGATCCCA...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGGTGGTTGAATTAACTTaGAGTTGGGCTTTAGACAAC +
Preference number: 4 (lower is better)
Translates to: QDEVNRTLVWICGFESNKVVELT*SWALDN
Trigger: GTTGTCTAAAGCCCAACTCCAAGTTAATTCAACCAC...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp ATAGCAGGAGAGAGAATGTTAGATGGAAATAAGGCAATCTCAACAGAGAGAACACCAGAGGGCCTTCAATaGAAAATCCTAGGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: IAGERMLDGNKAISTERTPEGLQ*KILGRK
Trigger: CTTTCTACCTAGGATTTTCCATTGAAGGCCCTCTGG...TGTTCTCTCTGTTGAGATTGCCTTATTTCCATCTAACATTCTCTCTCCTGCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR TCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATTTGAAACAGGCCATTTaGACTTTTGCTGTCTCATTC +
Preference number: 4 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHLKQAI*TFAVSF
Trigger: GAATGAGACAGCAAAAGTTCAAATGGCCTGTTTCAA...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTCCCTCTTGCTGTTATTaGTCTCTTCAGGGACTTCTC +
Preference number: 4 (lower is better)
Translates to: CGSVGLSPISFLFYIHLIPSCCY*SLQGLL
Trigger: GAGAAGTCCCTGAAGAGATCAATAACAGCAAGAGGG...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTAAGACTGGACTGCTGCTaGGGAAATGTTTATGAAACA +
Preference number: 4 (lower is better)
Translates to: NRTLVWICGFESNKLSLLRLDCC*GNVYET
Trigger: TGTTTCATAAACATTTCCTCAGCAGCAGTCCAGTCT...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR TCA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTTTTGTAAAAATGCCTTaGAATCTACATCCCGTTGCT +
Preference number: 4 (lower is better)
Translates to: EVNRTLVWICGFESNKLSFVKMP*NLHPVA
Trigger: AGCAACGGGATGTAGATTTCAAGGCATTTTTACAAA...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTAAGGCTTGACAAATaGATGCATTTTGTGGGAATC +
Preference number: 4 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHLRLDK*MHFVGI
Trigger: GATTCCCACAAAATGCATTCATTTGTCAAGCCTTAG...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp GGAGAGTGTTATGTGGTGGATGGGGAACAATATATTTACCTTCCACATAAGTTTGGCCATTTGAACTTTTaGTGTCTCATTCCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GECYVVDGEQYIYLPHKFGHLNF*CLIPLL
Trigger: CAGAAGAGGAATGAGACAGCAAAAGTTCAAATGGCC...AAACTTATGTGGAAGGTAAATATATTGTTCCCCATCCACCACATAACACTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR GCA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACGTCTCTCTCTGGAAATaGAGGATTTTCCTGAAAATG +
Preference number: 4 (lower is better)
Translates to: IELWCGSVGLSPISFLFYVSLWK*RIFLKM
Trigger: CATTTTCAGGAAAATCCTGCATTTCCAGAGAGAGAC...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp TTGAGAACACATATTACCATGAGGAAGCCCTCTAATCAGGCAGGAATGATGGTGAGAATTTGCCCGTATTaGTCATTAATCTTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LRTHITMRKPSNQAGMMVRICPY*SLILRS
Trigger: AGACCTTAAGATTAATGAGCAATACGGGCAAATTCT...CACCATCATTCCTGCCTGATTAGAGGGCTTCCTCATGGTAATATGTGTTCTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR GCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATTCACTGAGCAGAATTTaGCCGTATTGCTCATTAATC +
Preference number: 4 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHSLSRI*PYCSLI
Trigger: GATTAATGAGCAATACGGGCAAATTCTGCTCAGTGA...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGTTCTCAGTTAATTCCTaGAGGACTAATCCTGTTACT +
Preference number: 4 (lower is better)
Translates to: QDEVNRTLVWICGFESNKFSVNS*RTNPVT
Trigger: AGTAACAGGATTAGTCCTGCAGGAATTAACTGAGAA...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp GGAGAGTGTTATGTGGTGGATGGGGAACAATATATTTACCTTCCACATAAGTTTGATGGTGTATTGTTCTaGAGAAGGACTTCCACAAAC +
Preference number: 4 (lower is better)
Translates to: GECYVVDGEQYIYLPHKFDGVLF*RRTSTN
Trigger: GTTTGTGGAAGTCCTTCTGCAGAACAATACACCATC...AAACTTATGTGGAAGGTAAATATATTGTTCCCCATCCACCACATAACACTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR GCA 90 bp ATAGCAGGAGAGAGAATGTTAGATGGAAATAAGGCAATCTCAACAGAGAGAACAAAATCTACATCCCGTTaGTTGGAATTGGCCAGGATA +
Preference number: 4 (lower is better)
Translates to: IAGERMLDGNKAISTERTKSTSR*LELARI
Trigger: TATCCTGGCCAATTCCAAGCAACGGGATGTAGATTT...TGTTCTCTCTGTTGAGATTGCCTTATTTCCATCTAACATTCTCTCTCCTGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR GCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATACTCTCCTTCTTCATTaGCTTCATTCCATACTCTTC +
Preference number: 4 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHTLLLH*LHSILF
Trigger: GAAGAGTATGGAATGAAGGCAATGAAGAAGGAGAGT...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp ATAGCAGGAGAGAGAATGTTAGATGGAAATAAGGCAATCTCAACAGAGAGAACAACAGAGGATTTCCAGTaGAGTCAAGACATCCTCTTT +
Preference number: 4 (lower is better)
Translates to: IAGERMLDGNKAISTERTTEDFQ*SQDILF
Trigger: AAAGAGGATGTCTTGACTGCACTGGAAATCCTCTGT...TGTTCTCTCTGTTGAGATTGCCTTATTTCCATCTAACATTCTCTCTCCTGCTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR GCA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTAACAGAGGATTTCCAGTaGAGTCAAGACATCCTCTTT +
Preference number: 4 (lower is better)
Translates to: NRTLVWICGFESNKLSLLTEDFQ*SQDILF
Trigger: AAAGAGGATGTCTTGACTGCACTGGAAATCCTCTGT...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp ATAGCAGGAGAGAGAATGTTAGATGGAAATAAGGCAATCTCAACAGAGAGAACATCCACCAGGATACTTTaGCACCTCGATAAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: IAGERMLDGNKAISTERTSTRIL*HLDKSV
Trigger: AACACTTTTATCGAGGTGGCAAAGTATCCTGGTGGA...TGTTCTCTCTGTTGAGATTGCCTTATTTCCATCTAACATTCTCTCTCCTGCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR GCA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTAACTGTCTGCCAATTTTaGACTTTCATCTGGATTCCG +
Preference number: 4 (lower is better)
Translates to: NRTLVWICGFESNKLSLLTVCQF*TFIWIP
Trigger: CGGAATCCAGATGAAAGTGCAAAATTGGCAGACAGT...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATGAATCGTCTACTTCCTaGACTCAAGACCTTTTCAAT +
Preference number: 4 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHESSTS*TQDLFN
Trigger: ATTGAAAAGGTCTTGAGTGCAGGAAGTAGACGATTC...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp ATAGCAGGAGAGAGAATGTTAGATGGAAATAAGGCAATCTCAACAGAGAGAACACTTCTAGCTTTTTCCTaGAATTCTCCTCCTGGAGTA +
Preference number: 4 (lower is better)
Translates to: IAGERMLDGNKAISTERTLLAFS*NSPPGV
Trigger: TACTCCAGGAGGAGAATTGCAGGAAAAAGCTAGAAG...TGTTCTCTCTGTTGAGATTGCCTTATTTCCATCTAACATTCTCTCTCCTGCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR GCA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACTTAGTCCTACAAATTaGAAGACCTCTCGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: NRTLVWICGFESNKLSLLLSPTN*KTSRSC
Trigger: ACAACTCCGAGAGGTCTTGCAATTTGTAGGACTAAG...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTCAGCCAGTCTCTCTCTaGAAATGCAGGATTTTCCTG +
Preference number: 4 (lower is better)
Translates to: CGSVGLSPISFLFYIHLIQPVSL*KCRIFL
Trigger: CAGGAAAATCCTGCATTTCCAGAGAGAGACTGGCTG...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTAGGTACCTCCACAGCCTaGATGATGATAAAGATTGAT +
Preference number: 4 (lower is better)
Translates to: NRTLVWICGFESNKLSLLGTSTA*MMIKID
Trigger: ATCAATCTTTATCATCATCCAGGCTGTGGAGGTACC...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTATTTTGCACTTTCATCTaGATTCCGGGATCTCATGCA +
Preference number: 4 (lower is better)
Translates to: NRTLVWICGFESNKLSLLFCTFI*IPGSHA
Trigger: TGCATGAGATCCCGGAATCCAGATGAAAGTGCAAAA...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACAATGAATGCATTTTGTaGGAATCGTCTACTTCCTGC +
Preference number: 4 (lower is better)
Translates to: IELWCGSVGLSPISFLFYNECIL*ESSTSC
Trigger: GCAGGAAGTAGACGATTCCCACAAAATGCATTCATT...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACGTGGTTGAATTAACTTaGAGTTGGGCTTTAGACAAC +
Preference number: 4 (lower is better)
Translates to: IELWCGSVGLSPISFLFYVVELT*SWALDN
Trigger: GTTGTCTAAAGCCCAACTCCAAGTTAATTCAACCAC...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGAGTACTGCTCTATTTTaGCCTTGTGAACAATACTGT +
Preference number: 4 (lower is better)
Translates to: QDEVNRTLVWICGFESNKSTALF*PCEQYC
Trigger: ACAGTATTGTTCACAAGGCCAAAATAGAGCAGTACT...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGGTGTTATGTGGTGGATaGGGAACAATATATTTACCT +
Preference number: 4 (lower is better)
Translates to: QDEVNRTLVWICGFESNKVLCGG*GTIYLP
Trigger: AGGTAAATATATTGTTCCCCATCCACCACATAACAC...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CCA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTGAGAGTGTTATGTGGTaGATGGGGAACAATATATTT +
Preference number: 4 (lower is better)
Translates to: EVNRTLVWICGFESNKLSESVMW*MGNNIF
Trigger: AAATATATTGTTCCCCATCCACCACATAACACTCTC...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CCA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTAAATGAGCTTCTGGGATaGCATTCCTTGACACTGAAA +
Preference number: 4 (lower is better)
Translates to: NRTLVWICGFESNKLSLLNELLG*HSLTLK
Trigger: TTTCAGTGTCAAGGAATGCCATCCCAGAAGCTCATT...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR TCA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTTTCTTTGAAAGCTCTTaGGGCTTTTTCCGCAGCTTC +
Preference number: 4 (lower is better)
Translates to: CGSVGLSPISFLFYIHLIFFESS*GFFRSF
Trigger: GAAGCTGCGGAAAAAGCCTCAAGAGCTTTCAAAGAA...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATTCCTCCTGGAGTAATTaGCTCTCTTTACTTTGTAAT +
Preference number: 4 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHSSWSN*LSLLCN
Trigger: ATTACAAAGTAAAGAGAGTCAATTACTCCAGGAGGA...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACTCCTCCTGGAGTAATTaGCTCTCTTTACTTTGTAAT +
Preference number: 4 (lower is better)
Translates to: IELWCGSVGLSPISFLFYSSWSN*LSLLCN
Trigger: ATTACAAAGTAAAGAGAGTCAATTACTCCAGGAGGA...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACCCTTTCTTGATAATTTaGAAGAGTCACGTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: IELWCGSVGLSPISFLFYPFLII*KSHVLE
Trigger: TTCCAGAACGTGACTCTTGCAAATTATCAAGAAAGG...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACTTCTCAGTTAATTCCTaGAGGACTAATCCTGTTACT +
Preference number: 4 (lower is better)
Translates to: IELWCGSVGLSPISFLFYFSVNS*RTNPVT
Trigger: AGTAACAGGATTAGTCCTGCAGGAATTAACTGAGAA...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTGATCAAAAGGATATaGCATACAAGTCAATTGTTC +
Preference number: 4 (lower is better)
Translates to: EVNRTLVWICGFESNKLSLIKRI*HTSQLF
Trigger: GAACAATTGACTTGTATGCCATATCCTTTTGATCAG...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTCCAACAATTTCTCCATaGGGTTTGTCCTTGACTCCA +
Preference number: 4 (lower is better)
Translates to: CGSVGLSPISFLFYIHLIPTISP*GLSLTP
Trigger: TGGAGTCAAGGACAAACCCCATGGAGAAATTGTTGG...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTGAAAGTTTCAATGAGTaGATCTCCTGGGCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: CGSVGLSPISFLFYIHLIESFNE*ISWAFH
Trigger: GTGGAAAGCCCAGGAGATCCACTCATTGAAACTTTC...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATTCTGCTAAAACGGAATaGATGGCATTTTGTAGAAAG +
Preference number: 4 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHSAKTE*MAFCRK
Trigger: CTTTCTACAAAATGCCATCCATTCCGTTTTAGCAGA...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTGGGGAGAGTGTTATGTaGTGGATGGGGAACAATATA +
Preference number: 4 (lower is better)
Translates to: CGSVGLSPISFLFYIHLIGESVM*WMGNNI
Trigger: TATATTGTTCCCCATCCACCACATAACACTCTCCCC...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR TCA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTTGGCTGTCATGGAACTaGTCAAAAGGATATGGCATA +
Preference number: 4 (lower is better)
Translates to: CGSVGLSPISFLFYIHLIWLSWN*SKGYGI
Trigger: TATGCCATATCCTTTTGATCAGTTCCATGACAGCCA...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp ATAGCAGGAGAGAGAATGTTAGATGGAAATAAGGCAATCTCAACAGAGAGAACAGAAATCAGTTGTGAATaGCAAATCAGAATAGCAGGA +
Preference number: 4 (lower is better)
Translates to: IAGERMLDGNKAISTERTEISCE*QIRIAG
Trigger: TCCTGCTATTCTGATTTGTCATTCACAACTGATTTC...TGTTCTCTCTGTTGAGATTGCCTTATTTCCATCTAACATTCTCTCTCCTGCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR GCA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTGGCCATTTGAACTTTTaGTGTCTCATTCCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: CGSVGLSPISFLFYIHLIGHLNF*CLIPLL
Trigger: CAGAAGAGGAATGAGACAGCAAAAGTTCAAATGGCC...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp GGAGAGTGTTATGTGGTGGATGGGGAACAATATATTTACCTTCCACATAAGTTTCCTTTCTTGATAATTTaGAAGAGTCACGTTCTGGAA +
Preference number: 4 (lower is better)
Translates to: GECYVVDGEQYIYLPHKFPFLII*KSHVLE
Trigger: TTCCAGAACGTGACTCTTGCAAATTATCAAGAAAGG...AAACTTATGTGGAAGGTAAATATATTGTTCCCCATCCACCACATAACACTCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR GCA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATAGAATTTGCCCGTATTaGTCATTAATCTTAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHRICPY*SLILRS
Trigger: AGACCTTAAGATTAATGAGCAATACGGGCAAATTCT...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTGATCACTTGCTCTaGAATTTCTGCAAAATCAGT +
Preference number: 4 (lower is better)
Translates to: IELWCGSVGLSPISFLFYIDHLL*NFCKIS
Trigger: ACTGATTTTGCAGAAATTGCAGAGCAAGTGATCAAT...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp GGAGAGTGTTATGTGGTGGATGGGGAACAATATATTTACCTTCCACATAAGTTTCTATCAGTTTGCCTTTaGGATTCTTTGAAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: GECYVVDGEQYIYLPHKFLSVCL*DSLKAL
Trigger: AAGAGCTTTCAAAGAATCCCAAAGGCAAACTGATAG...AAACTTATGTGGAAGGTAAATATATTGTTCCCCATCCACCACATAACACTCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CCA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACTATCAGTTTGCCTTTaGGATTCTTTGAAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: NRTLVWICGFESNKLSLLLSVCL*DSLKAL
Trigger: AAGAGCTTTCAAAGAATCCCAAAGGCAAACTGATAG...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp ATAGCAGGAGAGAGAATGTTAGATGGAAATAAGGCAATCTCAACAGAGAGAACAGAATTAACTTGGAGTTaGGCTTTAGACAACTCAGAA +
Preference number: 4 (lower is better)
Translates to: IAGERMLDGNKAISTERTELTWS*ALDNSE
Trigger: TTCTGAGTTGTCTAAAGCCCAACTCCAAGTTAATTC...TGTTCTCTCTGTTGAGATTGCCTTATTTCCATCTAACATTCTCTCTCCTGCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CCA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTAATGGGAACAAGAGAATaGAGAGAGTTCAAGTTTATG +
Preference number: 4 (lower is better)
Translates to: NRTLVWICGFESNKLSLLMGTRE*REFKFM
Trigger: CATAAACTTGAACTCTCTCCATTCTCTTGTTCCCAT...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR TCA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTTTGAAACAGGCCATTTaGACTTTTGCTGTCTCATTC +
Preference number: 4 (lower is better)
Translates to: CGSVGLSPISFLFYIHLILKQAI*TFAVSF
Trigger: GAATGAGACAGCAAAAGTTCAAATGGCCTGTTTCAA...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR TCA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTGTATATAGCACAGGTTaGGAAGTAAAGGGAACAAAG +
Preference number: 4 (lower is better)
Translates to: CGSVGLSPISFLFYIHLIVYSTG*EVKGTK
Trigger: CTTTGTTCCCTTTACTTCTCAACCTGTGCTATATAC...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR GCA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTACTCTCCTTCTTCATTaGCTTCATTCCATACTCTTC +
Preference number: 4 (lower is better)
Translates to: CGSVGLSPISFLFYIHLITLLLH*LHSILF
Trigger: GAAGAGTATGGAATGAAGGCAATGAAGAAGGAGAGT...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR GCA 90 bp ATAGCAGGAGAGAGAATGTTAGATGGAAATAAGGCAATCTCAACAGAGAGAACAATTGATCACTTGCTCTaGAATTTCTGCAAAATCAGT +
Preference number: 4 (lower is better)
Translates to: IAGERMLDGNKAISTERTIDHLL*NFCKIS
Trigger: ACTGATTTTGCAGAAATTGCAGAGCAAGTGATCAAT...TGTTCTCTCTGTTGAGATTGCCTTATTTCCATCTAACATTCTCTCTCCTGCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CCA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTTCCTCATCTCTTTCCTaGATTATAGGAATAGCTTCC +
Preference number: 4 (lower is better)
Translates to: CGSVGLSPISFLFYIHLISSSLS*IIGIAS
Trigger: GGAAGCTATTCCTATAATCCAGGAAAGAGATGAGGA...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp ATAGCAGGAGAGAGAATGTTAGATGGAAATAAGGCAATCTCAACAGAGAGAACACTAAAACGGAATGGATaGCATTTTGTAGAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: IAGERMLDGNKAISTERTLKRNG*HFVESR
Trigger: TCTACTTTCTACAAAATGCCATCCATTCCGTTTTAG...TGTTCTCTCTGTTGAGATTGCCTTATTTCCATCTAACATTCTCTCTCCTGCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CCA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACTAAAACGGAATGGATaGCATTTTGTAGAAAGTAGA +
Preference number: 4 (lower is better)
Translates to: NRTLVWICGFESNKLSLLLKRNG*HFVESR
Trigger: TCTACTTTCTACAAAATGCCATCCATTCCGTTTTAG...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTAGATTCACCTGTAAATaGGAACAAGAGAATGGAGAG +
Preference number: 4 (lower is better)
Translates to: CGSVGLSPISFLFYIHLIRFTCK*EQENGE
Trigger: CTCTCCATTCTCTTGTTCCCATTTACAGGTGAATCT...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR TCA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTTTTGTAAAAATGCCTTaGAATCTACATCCCGTTGCT +
Preference number: 4 (lower is better)
Translates to: CGSVGLSPISFLFYIHLIFVKMP*NLHPVA
Trigger: AGCAACGGGATGTAGATTTCAAGGCATTTTTACAAA...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTGAATTAACTTGGAGTTaGGCTTTAGACAACTCAGAA +
Preference number: 4 (lower is better)
Translates to: CGSVGLSPISFLFYIHLIELTWS*ALDNSE
Trigger: TTCTGAGTTGTCTAAAGCCCAACTCCAAGTTAATTC...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CCA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTAGTACTGCTCTATTTTaGCCTTGTGAACAATACTGT +
Preference number: 4 (lower is better)
Translates to: CGSVGLSPISFLFYIHLISTALF*PCEQYC
Trigger: ACAGTATTGTTCACAAGGCCAAAATAGAGCAGTACT...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS TCA 90 bp CCCTTTCTTGATAATTTGCAAGAGTCACGTTCTGGAAAGCAGCTATaGGGAAGCAGAGCTGACACCACTACCACCTGGTCCAAGCCTTCC +
Preference number: 5 (lower is better)
Translates to: PFLDNLQESRSGKQL*GSRADTTTTWSKPS
Trigger: GGAAGGCTTGGACCAGGTGGTAGTGGTGTCAGCTCTGCTTCCTCATAGCTGCTTTCCAGAACGTGACTCTTGCAAATTATCAAGAAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411955.5
ENST00000437805.5
ENST00000446959.5
CDS GCA 90 bp AGCTGCTCTTCTGGCAAGGGGCTTACACTTTCCACAGACACAGTCTaGTCGGGTGAGATGCAATACCTTCTTTTAGCTGGTGTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: SCSSGKGLTLSTDTV*SGEMQYLLLAGVLF
Trigger: AAAGAGGACACCAGCTAAAAGAAGGTATTGCATCTCACCCGAGCAGACTGTGTCTGTGGAAAGTGTAAGCCCCTTGCCAGAAGAGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000437805.5
CDS-3UTR CAA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGAGTGTGCTTGCCTGCTaGGACCTGCACATGCGCTTG +
Preference number: 5 (lower is better)
Translates to: QDEVNRTLVWICGFESNKSVLAC*DLHMRL
Trigger: CAAGCGCATGTGCAGGTCCAAGCAGGCAAGCACACT...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS GCA 90 bp CCCCATGGTAGCCCCATTTCTACAAGGTCCTTCTCAGTTAATTCCTaGAGGACTAATCCTGTTACTTCTTCACTGAGCAGAATTTGCCCG +
Preference number: 5 (lower is better)
Translates to: PHGSPISTRSFSVNS*RTNPVTSSLSRICP
Trigger: CGGGCAAATTCTGCTCAGTGAAGAAGTAACAGGATTAGTCCTGCAGGAATTAACTGAGAAGGACCTTGTAGAAATGGGGCTACCATGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000318238.9
ENST00000411955.5
ENST00000414791.5
ENST00000437805.5
ENST00000439952.5
ENST00000446033.1
ENST00000446959.5
ENST00000610760.1
CDS-3UTR CAA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATAGTGTGCTTGCCTGCTaGGACCTGCACATGCGCTTG +
Preference number: 5 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHSVLAC*DLHMRL
Trigger: CAAGCGCATGTGCAGGTCCAAGCAGGCAAGCACACT...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS TCA 90 bp TTCTGGCAAGGGGCTTACACTTTCCACAGACACAGTCTGCTCGGGTaGGATGCAATACCTTCTTTTAGCTGGTGTCCTCTTTCAGAAATT +
Preference number: 5 (lower is better)
Translates to: FWQGAYTFHRHSLLG*DAIPSFSWCPLSEI
Trigger: AATTTCTGAAAGAGGACACCAGCTAAAAGAAGGTATTGCATCTCACCCGAGCAGACTGTGTCTGTGGAAAGTGTAAGCCCCTTGCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000437805.5
CDS TCA 90 bp ATCCTATGGGGTGTATCTTCAAAATATACCCAGCATTTGACTACCTaGCACCACTACCACCTGGTCCAAGCCTTCCTCATCTCTTTCCTG +
Preference number: 5 (lower is better)
Translates to: ILWGVSSKYTQHLTT*HHYHLVQAFLISFL
Trigger: CAGGAAAGAGATGAGGAAGGCTTGGACCAGGTGGTAGTGGTGTCAGGTAGTCAAATGCTGGGTATATTTTGAAGATACACCCCATAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318238.9
ENST00000446033.1
ENST00000477816.1
CDS-3UTR CAA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGTCCCGTTGCTTGGAATaGGCCAGGATATCCCTAGAG +
Preference number: 5 (lower is better)
Translates to: QDEVNRTLVWICGFESNKSRCLE*ARISLE
Trigger: CTCTAGGGATATCCTGGCCAATTCCAAGCAACGGGA...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATGACCTGCACATGCGCTaGTACTGTCCCCTGAAGGAT +
Preference number: 5 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHDLHMR*YCPLKD
Trigger: ATCCTTCAGGGGACAGTACAAGCGCATGTGCAGGTC...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS GCA 90 bp ATCATCCACAAGGAGAAGCACAGGAATGTAATCCTGATGGCTCTTTaGCCTATAGGTGACCAGATTGATCACTTGCTCTGCAATTTCTGC +
Preference number: 5 (lower is better)
Translates to: IIHKEKHRNVILMAL*PIGDQIDHLLCNFC
Trigger: GCAGAAATTGCAGAGCAAGTGATCAATCTGGTCACCTATAGGGCAAAGAGCCATCAGGATTACATTCCTGTGCTTCTCCTTGTGGATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318238.9
ENST00000411955.5
ENST00000437805.5
CDS-3UTR CAA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACTTTCACCCTCTGCCTTaGCTGGGAAGCTGCTCTTCT +
Preference number: 5 (lower is better)
Translates to: IELWCGSVGLSPISFLFYFHPLP*LGSCSS
Trigger: AGAAGAGCAGCTTCCCAGCAAAGGCAGAGGGTGAAA...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CAA 90 bp GGAGAGTGTTATGTGGTGGATGGGGAACAATATATTTACCTTCCACATAAGTTTTGGAGGAGGTCCCTTTaGACTCTAGGTCCCCAGTGT +
Preference number: 5 (lower is better)
Translates to: GECYVVDGEQYIYLPHKFWRRSL*TLGPQC
Trigger: ACACTGGGGACCTAGAGTCAAAAGGGACCTCCTCCA...AAACTTATGTGGAAGGTAAATATATTGTTCCCCATCCACCACATAACACTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CAA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTATAGGAATAGCTTCCTaGCCAGGTTCCCTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: EVNRTLVWICGFESNKLSIGIAS*PGSLLL
Trigger: CAGCAAGAGGGAACCTGGCAAGGAAGCTATTCCTAT...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTGTAGGCAGAACAGACTaGGTCCTTGTTCAGTTTGCC +
Preference number: 5 (lower is better)
Translates to: EVNRTLVWICGFESNKLSVGRTD*VLVQFA
Trigger: GGCAAACTGAACAAGGACCAAGTCTGTTCTGCCTAC...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CAA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATTCCCGTTGCTTGGAATaGGCCAGGATATCCCTAGAG +
Preference number: 5 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHSRCLE*ARISLE
Trigger: CTCTAGGGATATCCTGGCCAATTCCAAGCAACGGGA...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCGGGCAAAAACCTTCTaGATGACCGAGTCACCGATT +
Preference number: 5 (lower is better)
Translates to: QDEVNRTLVWICGFESNKRAKTF*MTESPI
Trigger: AATCGGTGACTCGGTCATCAAGAAGGTTTTTGCCCG...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp TTGAGAACACATATTACCATGAGGAAGCCCTCTAATCAGGCAGGAATGATGGTGATGAGTTGTGCTTCCTaGCTGTCAACATCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: LRTHITMRKPSNQAGMMVMSCAS*LSTSCP
Trigger: AGGACAGGATGTTGACAGCAAGGAAGCACAACTCAT...CACCATCATTCCTGCCTGATTAGAGGGCTTCCTCATGGTAATATGTGTTCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CAA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTAGACCTGCACATGCGCTaGTACTGTCCCCTGAAGGAT +
Preference number: 5 (lower is better)
Translates to: NRTLVWICGFESNKLSLLDLHMR*YCPLKD
Trigger: ATCCTTCAGGGGACAGTACAAGCGCATGTGCAGGTC...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGAAGATTGACTCCACTTaGTGCCAAGCTCTGCGGGTA +
Preference number: 5 (lower is better)
Translates to: QDEVNRTLVWICGFESNKKIDST*CQALRV
Trigger: TACCCGCAGAGCTTGGCACAAAGTGGAGTCAATCTT...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTGCTCTAGAATGCTGCTaGAGACTGTTCTGGCTGTTG +
Preference number: 5 (lower is better)
Translates to: EVNRTLVWICGFESNKLSALECC*RLFWLL
Trigger: CAACAGCCAGAACAGTCTCAAGCAGCATTCTAGAGC...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CAA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATGAACAGACTTGGTCCTaGTTCAGTTTGCCGGAGGAT +
Preference number: 5 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHEQTWS*FSLPED
Trigger: ATCCTCCGGCAAACTGAACAAGGACCAAGTCTGTTC...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CAA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACGATAGAAAAGTGTGCTaGCCTGCTTGGACCTGCACA +
Preference number: 5 (lower is better)
Translates to: IELWCGSVGLSPISFLFYDRKVC*PAWTCT
Trigger: TGTGCAGGTCCAAGCAGGCAAGCACACTTTTCTATC...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp GGAGAGTGTTATGTGGTGGATGGGGAACAATATATTTACCTTCCACATAAGTTTATAGGAATAGCTTCCTaGCCAGGTTCCCTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: GECYVVDGEQYIYLPHKFIGIAS*PGSLLL
Trigger: CAGCAAGAGGGAACCTGGCAAGGAAGCTATTCCTAT...AAACTTATGTGGAAGGTAAATATATTGTTCCCCATCCACCACATAACACTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CAA 90 bp ATAGCAGGAGAGAGAATGTTAGATGGAAATAAGGCAATCTCAACAGAGAGAACACGGGCAAAAACCTTCTaGATGACCGAGTCACCGATT +
Preference number: 5 (lower is better)
Translates to: IAGERMLDGNKAISTERTRAKTF*MTESPI
Trigger: AATCGGTGACTCGGTCATCAAGAAGGTTTTTGCCCG...TGTTCTCTCTGTTGAGATTGCCTTATTTCCATCTAACATTCTCTCTCCTGCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CAA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACTCATCTCCATACACCTaGCGCTGTCTTGTAAGCAGA +
Preference number: 5 (lower is better)
Translates to: IELWCGSVGLSPISFLFYSSPYT*RCLVSR
Trigger: TCTGCTTACAAGACAGCGCAAGGTGTATGGAGATGA...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp ATAGCAGGAGAGAGAATGTTAGATGGAAATAAGGCAATCTCAACAGAGAGAACAAGTGTCTTAAGACCTTaGCTGTTTTCACCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: IAGERMLDGNKAISTERTSVLRP*LFSPSA
Trigger: GGCAGAGGGTGAAAACAGCAAAGGTCTTAAGACACT...TGTTCTCTCTGTTGAGATTGCCTTATTTCCATCTAACATTCTCTCTCCTGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CAA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTGACCAGATTGATCACTaGCTCTGCAATTTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: EVNRTLVWICGFESNKLSDQIDH*LCNFCK
Trigger: TTTGCAGAAATTGCAGAGCAAGTGATCAATCTGGTC...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTAATGAGTTGTGCTTCCTaGCTGTCAACATCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: NRTLVWICGFESNKLSLLMSCAS*LSTSCP
Trigger: AGGACAGGATGTTGACAGCAAGGAAGCACAACTCAT...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp ATAGCAGGAGAGAGAATGTTAGATGGAAATAAGGCAATCTCAACAGAGAGAACATCATCTCCATACACCTaGCGCTGTCTTGTAAGCAGA +
Preference number: 5 (lower is better)
Translates to: IAGERMLDGNKAISTERTSSPYT*RCLVSR
Trigger: TCTGCTTACAAGACAGCGCAAGGTGTATGGAGATGA...TGTTCTCTCTGTTGAGATTGCCTTATTTCCATCTAACATTCTCTCTCCTGCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CAA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATGCTCCTACAGTTTTaGTTCCCATCCAACCACCAT +
Preference number: 5 (lower is better)
Translates to: IELWCGSVGLSPISFLFYMLLQF*FPSNHH
Trigger: ATGGTGGTTGGATGGGAACAAAAACTGTAGGAGCAT...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATATGCTCCTACAGTTTTaGTTCCCATCCAACCACCAT +
Preference number: 5 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHMLLQF*FPSNHH
Trigger: ATGGTGGTTGGATGGGAACAAAAACTGTAGGAGCAT...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGTGCCTTTGGGATTCTTaGAAAGCTCTTGAGGCTTTT +
Preference number: 5 (lower is better)
Translates to: QDEVNRTLVWICGFESNKCLWDS*KALEAF
Trigger: AAAAGCCTCAAGAGCTTTCAAAGAATCCCAAAGGCA...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTTTGTCATGGGCTTTTTaGAGTTTTGCTGCAGTAGGA +
Preference number: 5 (lower is better)
Translates to: EVNRTLVWICGFESNKLSLSWAF*SFAAVG
Trigger: TCCTACTGCAGCAAAACTCAAAAAAGCCCATGACAA...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACTGTGGATCTGTGGGTTaGAGTCCAATAAGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: IELWCGSVGLSPISFLFYCGSVG*SPISFL
Trigger: GAGAAAGCTTATTGGACTCAAACCCACAGATCCACA...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS TCA 90 bp ACAAGCTGTGTTATACATGTCATATCGTCTCTGGGACTTCTGTGGTaGCCAGTTCTCGGTTTCATAGTTTTTACTATCAGTTTGCCTTTG +
Preference number: 5 (lower is better)
Translates to: TSCVIHVISSLGLLW*PVLGFIVFTISLPL
Trigger: CAAAGGCAAACTGATAGTAAAAACTATGAAACCGAGAACTGGTCACCACAGAAGTCCCAGAGACGATATGACATGTATAACACAGCTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318238.9
ENST00000411955.5
ENST00000437805.5
CDS-3UTR CAA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTGAAACAGGCCATTaGAACTTTTGCTGTCTCATT +
Preference number: 5 (lower is better)
Translates to: EVNRTLVWICGFESNKLSLETGH*NFCCLI
Trigger: AATGAGACAGCAAAAGTTCAAATGGCCTGTTTCAAG...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp TTGAGAACACATATTACCATGAGGAAGCCCTCTAATCAGGCAGGAATGATGGTGCGGAGGATATACTTGTaGAGAACGTATTGCATAAAA +
Preference number: 5 (lower is better)
Translates to: LRTHITMRKPSNQAGMMVRRIYL*RTYCIK
Trigger: TTTTATGCAATACGTTCTCAACAAGTATATCCTCCG...CACCATCATTCCTGCCTGATTAGAGGGCTTCCTCATGGTAATATGTGTTCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CAA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCCCTTTCTTGATAATTaGCAAGAGTCACGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHPFLDN*QESRSG
Trigger: TCCAGAACGTGACTCTTGCAAATTATCAAGAAAGGG...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTTTCACTGAGCAGAATTaGCCCGTATTGCTCATTAAT +
Preference number: 5 (lower is better)
Translates to: EVNRTLVWICGFESNKLSFTEQN*PVLLIN
Trigger: ATTAATGAGCAATACGGGCAAATTCTGCTCAGTGAA...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTGTTTTGGACGGTTTaGAATTATCTAATTGTCCCG +
Preference number: 5 (lower is better)
Translates to: EVNRTLVWICGFESNKLSLFWTV*NYLIVP
Trigger: CGGGACAATTAGATAATTCAAAACCGTCCAAAACAG...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp TTGAGAACACATATTACCATGAGGAAGCCCTCTAATCAGGCAGGAATGATGGTGTTCTGGTGTTCTGTTTaGGACGGTTTTGAATTATCT +
Preference number: 5 (lower is better)
Translates to: LRTHITMRKPSNQAGMMVFWCSV*DGFELS
Trigger: AGATAATTCAAAACCGTCCAAAACAGAACACCAGAA...CACCATCATTCCTGCCTGATTAGAGGGCTTCCTCATGGTAATATGTGTTCTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CAA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACTCCCGAATACACTTCTaGGCTTCATTGATCTCACTT +
Preference number: 5 (lower is better)
Translates to: IELWCGSVGLSPISFLFYSRIHF*ASLISL
Trigger: AAGTGAGATCAATGAAGCCAAGAAGTGTATTCGGGA...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp TTGAGAACACATATTACCATGAGGAAGCCCTCTAATCAGGCAGGAATGATGGTGTGGAAATACTGTGGTTaGTTAGTTCATCTTCCATCT +
Preference number: 5 (lower is better)
Translates to: LRTHITMRKPSNQAGMMVWKYCG*LVHLPS
Trigger: AGATGGAAGATGAACTAACAAACCACAGTATTTCCA...CACCATCATTCCTGCCTGATTAGAGGGCTTCCTCATGGTAATATGTGTTCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CAA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGTCCAGGAATTTAGATTaGTCTTTCTCGATGTCTGTC +
Preference number: 5 (lower is better)
Translates to: QDEVNRTLVWICGFESNKSRNLD*SFSMSV
Trigger: GACAGACATCGAGAAAGACAAATCTAAATTCCTGGA...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGACAAATGAATGCATTTaGTGGGAATCGTCTACTTCC +
Preference number: 5 (lower is better)
Translates to: QDEVNRTLVWICGFESNKTNECI*WESSTS
Trigger: GGAAGTAGACGATTCCCACAAAATGCATTCATTTGT...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTGATAGAAAAGTGTGCTaGCCTGCTTGGACCTGCACA +
Preference number: 5 (lower is better)
Translates to: CGSVGLSPISFLFYIHLIDRKVC*PAWTCT
Trigger: TGTGCAGGTCCAAGCAGGCAAGCACACTTTTCTATC...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS TCA 90 bp TCTCGGTTTCATAGTTTTTACTATCAGTTTGCCTTTGGGATTCTTTaGAAGCTCTTGAGGCTTTTTCCGCAGCTTCTAGGAGATGTGTTA +
Preference number: 5 (lower is better)
Translates to: SRFHSFYYQFAFGIL*KLLRLFPQLLGDVL
Trigger: TAACACATCTCCTAGAAGCTGCGGAAAAAGCCTCAAGAGCTTTCAAAGAATCCCAAAGGCAAACTGATAGTAAAAACTATGAAACCGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000318238.9
ENST00000411955.5
ENST00000437805.5
CDS-3UTR CAA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTAAGGCCATTTGAACTTTaGCTGTCTCATTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: NRTLVWICGFESNKLSLLRPFEL*LSHSSS
Trigger: AGAAGAGGAATGAGACAGCAAAAGTTCAAATGGCCT...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTATGCCGGAGGATATACTaGTTGAGAACGTATTGCATA +
Preference number: 5 (lower is better)
Translates to: NRTLVWICGFESNKLSLLCRRIY*LRTYCI
Trigger: TATGCAATACGTTCTCAACAAGTATATCCTCCGGCA...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CAA 90 bp GAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTATTAGTTCCCCTTTCTaGATAATTTGCAAGAGTCAC +
Preference number: 5 (lower is better)
Translates to: EVNRTLVWICGFESNKLSISSPF*IICKSH
Trigger: GTGACTCTTGCAAATTATCAAGAAAGGGGAACTAAT...AGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACCAGAATTTGCCCGTATaGCTCATTAATCTTAAGGTC +
Preference number: 5 (lower is better)
Translates to: IELWCGSVGLSPISFLFYQNLPV*LINLKV
Trigger: GACCTTAAGATTAATGAGCAATACGGGCAAATTCTG...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCAGAATTTGCCCGTATaGCTCATTAATCTTAAGGTC +
Preference number: 5 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHQNLPV*LINLKV
Trigger: GACCTTAAGATTAATGAGCAATACGGGCAAATTCTG...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATGTGTTTGTGAGAGCTTaGAACTCATGTATTGGATCA +
Preference number: 5 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHVFVRA*NSCIGS
Trigger: TGATCCAATACATGAGTTCAAAGCTCTCACAAACAC...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACGTGTTTGTGAGAGCTTaGAACTCATGTATTGGATCA +
Preference number: 5 (lower is better)
Translates to: IELWCGSVGLSPISFLFYVFVRA*NSCIGS
Trigger: TGATCCAATACATGAGTTCAAAGCTCTCACAAACAC...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp CAAGATGAGGTAAATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGTGGAAATACTGTGGTTaGTTAGTTCATCTTCCATCT +
Preference number: 5 (lower is better)
Translates to: QDEVNRTLVWICGFESNKWKYCG*LVHLPS
Trigger: AGATGGAAGATGAACTAACAAACCACAGTATTTCCA...CTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATTTACCTCATCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATTCCAGGAATTTAGATTaGTCTTTCTCGATGTCTGTC +
Preference number: 5 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHSRNLD*SFSMSV
Trigger: GACAGACATCGAGAAAGACAAATCTAAATTCCTGGA...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATACAAATGAATGCATTTaGTGGGAATCGTCTACTTCC +
Preference number: 5 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHTNECI*WESSTS
Trigger: GGAAGTAGACGATTCCCACAAAATGCATTCATTTGT...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTATGCCTTTGGGATTCTTaGAAAGCTCTTGAGGCTTTT +
Preference number: 5 (lower is better)
Translates to: NRTLVWICGFESNKLSLLCLWDS*KALEAF
Trigger: AAAAGCCTCAAGAGCTTTCAAAGAATCCCAAAGGCA...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACACTATCAGTTTGCCTTaGGGATTCTTTGAAAGCTCT +
Preference number: 5 (lower is better)
Translates to: IELWCGSVGLSPISFLFYTISLP*GFFESS
Trigger: AGAGCTTTCAAAGAATCCCAAAGGCAAACTGATAGT...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp ATAGCAGGAGAGAGAATGTTAGATGGAAATAAGGCAATCTCAACAGAGAGAACATTGTCATGGGCTTTTTaGAGTTTTGCTGCAGTAGGA +
Preference number: 5 (lower is better)
Translates to: IAGERMLDGNKAISTERTLSWAF*SFAAVG
Trigger: TCCTACTGCAGCAAAACTCAAAAAAGCCCATGACAA...TGTTCTCTCTGTTGAGATTGCCTTATTTCCATCTAACATTCTCTCTCCTGCTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CAA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTTGGTCCTTGTTCAGTTaGCCGGAGGATATACTTGTT +
Preference number: 5 (lower is better)
Translates to: CGSVGLSPISFLFYIHLIWSLFS*PEDILV
Trigger: AACAAGTATATCCTCCGGCAAACTGAACAAGGACCA...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CAA 90 bp GGAGAGTGTTATGTGGTGGATGGGGAACAATATATTTACCTTCCACATAAGTTTTTCACTGAGCAGAATTaGCCCGTATTGCTCATTAAT +
Preference number: 5 (lower is better)
Translates to: GECYVVDGEQYIYLPHKFFTEQN*PVLLIN
Trigger: ATTAATGAGCAATACGGGCAAATTCTGCTCAGTGAA...AAACTTATGTGGAAGGTAAATATATTGTTCCCCATCCACCACATAACACTCTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CAA 90 bp CTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATTTCTGGTGTTCTGTTTaGGACGGTTTTGAATTATCT +
Preference number: 5 (lower is better)
Translates to: LWCGSVGLSPISFLFYIHFWCSV*DGFELS
Trigger: AGATAATTCAAAACCGTCCAAAACAGAACACCAGAA...ATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACCACTTCTTGGCTTCATaGATCTCACTTTCTTCAAAA +
Preference number: 5 (lower is better)
Translates to: IELWCGSVGLSPISFLFYHFLAS*ISLSSK
Trigger: TTTTGAAGAAAGTGAGATCAATGAAGCCAAGAAGTG...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACAAGTTTTCACAGTTCTaGTGCTGCTTTTCAATTTCC +
Preference number: 5 (lower is better)
Translates to: IELWCGSVGLSPISFLFYKFSQF*CCFSIS
Trigger: GGAAATTGAAAAGCAGCACAAGAACTGTGAAAACTT...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTAACTATCAGTTTGCCTTaGGGATTCTTTGAAAGCTCT +
Preference number: 5 (lower is better)
Translates to: NRTLVWICGFESNKLSLLTISLP*GFFESS
Trigger: AGAGCTTTCAAAGAATCCCAAAGGCAAACTGATAGT...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp ATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACTGTGCCAGAGGGAATTaGTATTTTGTGCTTTATCAA +
Preference number: 5 (lower is better)
Translates to: IELWCGSVGLSPISFLFYCARGN*YFVLYQ
Trigger: TTGATAAAGCACAAAATACAAATTCCCTCTGGCACA...GTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTAGGCCATTTGAACTTTaGCTGTCTCATTCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: CGSVGLSPISFLFYIHLIRPFEL*LSHSSS
Trigger: AGAAGAGGAATGAGACAGCAAAAGTTCAAATGGCCT...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTCCCTTTCTTGATAATTaGCAAGAGTCACGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: CGSVGLSPISFLFYIHLIPFLDN*QESRSG
Trigger: TCCAGAACGTGACTCTTGCAAATTATCAAGAAAGGG...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp AATAGAACTCTGGTGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACACTTCTTGGCTTCATaGATCTCACTTTCTTCAAAA +
Preference number: 5 (lower is better)
Translates to: NRTLVWICGFESNKLSLLHFLAS*ISLSSK
Trigger: TTTTGAAGAAAGTGAGATCAATGAAGCCAAGAAGTG...TAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACACCAGAGTTCTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTTCCCGAATACACTTCTaGGCTTCATTGATCTCACTT +
Preference number: 5 (lower is better)
Translates to: CGSVGLSPISFLFYIHLISRIHF*ASLISL
Trigger: AAGTGAGATCAATGAAGCCAAGAAGTGTATTCGGGA...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTGACCAGATTGATCACTaGCTCTGCAATTTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: CGSVGLSPISFLFYIHLIDQIDH*LCNFCK
Trigger: TTTGCAGAAATTGCAGAGCAAGTGATCAATCTGGTC...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp ATAGCAGGAGAGAGAATGTTAGATGGAAATAAGGCAATCTCAACAGAGAGAACATGTGCCAGAGGGAATTaGTATTTTGTGCTTTATCAA +
Preference number: 5 (lower is better)
Translates to: IAGERMLDGNKAISTERTCARGN*YFVLYQ
Trigger: TTGATAAAGCACAAAATACAAATTCCCTCTGGCACA...TGTTCTCTCTGTTGAGATTGCCTTATTTCCATCTAACATTCTCTCTCCTGCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318238.9
CDS-3UTR CAA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTCTTGAAACAGGCCATTaGAACTTTTGCTGTCTCATT +
Preference number: 5 (lower is better)
Translates to: CGSVGLSPISFLFYIHLILETGH*NFCCLI
Trigger: AATGAGACAGCAAAAGTTCAAATGGCCTGTTTCAAG...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTCTGTTTTGGACGGTTTaGAATTATCTAATTGTCCCG +
Preference number: 5 (lower is better)
Translates to: CGSVGLSPISFLFYIHLILFWTV*NYLIVP
Trigger: CGGGACAATTAGATAATTCAAAACCGTCCAAAACAG...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTATTAGTTCCCCTTTCTaGATAATTTGCAAGAGTCAC +
Preference number: 5 (lower is better)
Translates to: CGSVGLSPISFLFYIHLIISSPF*IICKSH
Trigger: GTGACTCTTGCAAATTATCAAGAAAGGGGAACTAAT...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS-3UTR CAA 90 bp TGTGGATCTGTGGGTTTGAGTCCAATAAGCTTTCTCTTTTACATTCATCTTATTAAGTTTTCACAGTTCTaGTGCTGCTTTTCAATTTCC +
Preference number: 5 (lower is better)
Translates to: CGSVGLSPISFLFYIHLIKFSQF*CCFSIS
Trigger: GGAAATTGAAAAGCAGCACAAGAACTGTGAAAACTT...AATAAGATGAATGTAAAAGAGAAAGCTTATTGGACTCAAACCCACAGATCCACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000411955.5
CDS TCA 72 bp GGGGCTTACACTTTCCACAGACACAGTCTGCTCGGGTaGGATGCAATACCTTCTTTTAGCTGGTGTCCTCTT +
Preference number: 6 (lower is better)
Translates to: GAYTFHRHSLLG*DAIPSFSWCPL
Trigger: AAGAGGACACCAGCTAAAAGAAGGTATTGCATCTCACCCGAGCAGACTGTGTCTGTGGAAAGTGTAAGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000437805.5
CDS TCA 72 bp GATAATTTGCAAGAGTCACGTTCTGGAAAGCAGCTATaGGGAAGCAGAGCTGACACCACTACCACCTGGTCC +
Preference number: 6 (lower is better)
Translates to: DNLQESRSGKQL*GSRADTTTTWS
Trigger: GGACCAGGTGGTAGTGGTGTCAGCTCTGCTTCCTCATAGCTGCTTTCCAGAACGTGACTCTTGCAAATTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411955.5
ENST00000437805.5
ENST00000446959.5
CDS GCA 72 bp TCTGGCAAGGGGCTTACACTTTCCACAGACACAGTCTaGTCGGGTGAGATGCAATACCTTCTTTTAGCTGGT +
Preference number: 6 (lower is better)
Translates to: SGKGLTLSTDTV*SGEMQYLLLAG
Trigger: ACCAGCTAAAAGAAGGTATTGCATCTCACCCGAGCAGACTGTGTCTGTGGAAAGTGTAAGCCCCTTGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000437805.5
CDS GCA 72 bp TGTTTAGACCCTTCCTTTTGCCCAGATAGAAAAGTGTaGTTGCCTGCTTGGACCTGCACATGCGCTTGTACT +
Preference number: 6 (lower is better)
Translates to: CLDPSFCPDRKV*LPAWTCTCACT
Trigger: AGTACAAGCGCATGTGCAGGTCCAAGCAGGCAAGCACACTTTTCTATCTGGGCAAAAGGAAGGGTCTAAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318238.9
ENST00000411955.5
ENST00000437805.5
ENST00000610760.1
CDS TCA 72 bp GGTGTATCTTCAAAATATACCCAGCATTTGACTACCTaGCACCACTACCACCTGGTCCAAGCCTTCCTCATC +
Preference number: 6 (lower is better)
Translates to: GVSSKYTQHLTT*HHYHLVQAFLI
Trigger: GATGAGGAAGGCTTGGACCAGGTGGTAGTGGTGTCAGGTAGTCAAATGCTGGGTATATTTTGAAGATACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318238.9
ENST00000446033.1
ENST00000477816.1
CDS TCA 72 bp TCCTATGGGGTGTATCTTCAAAATATACCCAGCATTTaGCTACCTGACACCACTACCACCTGGTCCAAGCCT +
Preference number: 6 (lower is better)
Translates to: SYGVYLQNIPSI*LPDTTTTWSKP
Trigger: AGGCTTGGACCAGGTGGTAGTGGTGTCAGGTAGTCAAATGCTGGGTATATTTTGAAGATACACCCCATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318238.9
ENST00000446033.1
ENST00000477816.1
CDS TCA 72 bp GTTCCATATTCTACAGAGATTAGCTTGCCTTCAGCCTaGCCAGTTAGACGACGCAGGAGGTCTTTGACTTCA +
Preference number: 6 (lower is better)
Translates to: VPYSTEISLPSA*PVRRRRRSLTS
Trigger: TGAAGTCAAAGACCTCCTGCGTCGTCTAACTGGTCAGGCTGAAGGCAAGCTAATCTCTGTAGAATATGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318238.9
ENST00000411955.5
ENST00000437805.5
ENST00000610760.1
CDS GCA 72 bp AAGGAGAAGCACAGGAATGTAATCCTGATGGCTCTTTaGCCTATAGGTGACCAGATTGATCACTTGCTCTGC +
Preference number: 6 (lower is better)
Translates to: KEKHRNVILMAL*PIGDQIDHLLC
Trigger: GCAGAGCAAGTGATCAATCTGGTCACCTATAGGGCAAAGAGCCATCAGGATTACATTCCTGTGCTTCTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318238.9
ENST00000411955.5
ENST00000437805.5
CDS CCA 72 bp TGTTTACTCATATCAAAGCTTCAACTTCTTCCTCACTaGGCTCACTCACTCACTTTCCGTGCCTCCGGGAAA +
Preference number: 6 (lower is better)
Translates to: CLLISKLQLLPH*AHSLTFRASGK
Trigger: TTTCCCGGAGGCACGGAAAGTGAGTGAGTGAGCCCAGTGAGGAAGAAGTTGAAGCTTTGATATGAGTAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318238.9
ENST00000411955.5
ENST00000437805.5
ENST00000439952.5
ENST00000446033.1
ENST00000446959.5
CDS CAA 72 bp AAAAGTGTGCTTGCCTGCTTGGACCTGCACATGCGCTaGTACTGTCCCCTGAAGGATCTATTTAAGGATGAA +
Preference number: 6 (lower is better)
Translates to: KSVLACLDLHMR*YCPLKDLFKDE
Trigger: TTCATCCTTAAATAGATCCTTCAGGGGACAGTACAAGCGCATGTGCAGGTCCAAGCAGGCAAGCACACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318238.9
ENST00000411955.5
ENST00000437805.5
ENST00000610760.1
CDS CAA 90 bp TCCAAGCCTTCCTCATCTCTTTCCTGGATTATAGGAATAGCTTCCTaGCCAGGTTCCCTCTTGCTGTTATTGATCTCTTCAGGGACTTCT +
Preference number: 6 (lower is better)
Translates to: SKPSSSLSWIIGIAS*PGSLLLLLISSGTS
Trigger: AGAAGTCCCTGAAGAGATCAATAACAGCAAGAGGGAACCTGGCAAGGAAGCTATTCCTATAATCCAGGAAAGAGATGAGGAAGGCTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318238.9
ENST00000411955.5
ENST00000437805.5
ENST00000446033.1
ENST00000446959.5
ENST00000477816.1
CDS CAA 72 bp AAAAATGCCTTGAAATCTACATCCCGTTGCTTGGAATaGGCCAGGATATCCCTAGAGCTAGCCCCTTCTCTT +
Preference number: 6 (lower is better)
Translates to: KNALKSTSRCLE*ARISLELAPSL
Trigger: AAGAGAAGGGGCTAGCTCTAGGGATATCCTGGCCAATTCCAAGCAACGGGATGTAGATTTCAAGGCATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318238.9
ENST00000411955.5
ENST00000437805.5
CDS TCA 72 bp GTTCTTTTAGACAGTACAGGGCAATCAGAGGGTGAATaGTACGCACACCTGTGTATCTCCCATATTCTGCAA +
Preference number: 6 (lower is better)
Translates to: VLLDSTGQSEGE*YAHLCISHILQ
Trigger: TTGCAGAATATGGGAGATACACAGGTGTGCGTATCATTCACCCTCTGATTGCCCTGTACTGTCTAAAAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318238.9
ENST00000411955.5
ENST00000437805.5
CDS TCA 72 bp TCCAGTTCTTTTAGACAGTACAGGGCAATCAGAGGGTaGATGATACGCACACCTGTGTATCTCCCATATTCT +
Preference number: 6 (lower is better)
Translates to: SSSFRQYRAIRG*MIRTPVYLPYS
Trigger: AGAATATGGGAGATACACAGGTGTGCGTATCATTCACCCTCTGATTGCCCTGTACTGTCTAAAAGAACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318238.9
ENST00000411955.5
ENST00000437805.5
CDS TCA 72 bp CCTGCTTGGACCTGCACATGCGCTTGTACTGTCCCCTaGAGGATCTATTTAAGGATGAAACATACTTTTCTA +
Preference number: 6 (lower is better)
Translates to: PAWTCTCACTVP*RIYLRMKHTFL
Trigger: TAGAAAAGTATGTTTCATCCTTAAATAGATCCTTCAGGGGACAGTACAAGCGCATGTGCAGGTCCAAGCAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318238.9
ENST00000411955.5
ENST00000437805.5
ENST00000610760.1
CDS GCA 72 bp AGCTGTAGGCAGAACAGACTTGGTCCTTGTTCAGTTTaGCGGAGGATATACTTGTTGAGAACGTATTGCATA +
Preference number: 6 (lower is better)
Translates to: SCRQNRLGPCSV*RRIYLLRTYCI
Trigger: TATGCAATACGTTCTCAACAAGTATATCCTCCGGCAAACTGAACAAGGACCAAGTCTGTTCTGCCTACAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000318238.9
ENST00000446033.1
CDS GCA 72 bp AAATTTTGTAAAAATGCCTTGAAATCTACATCCCGTTaGTTGGAATTGGCCAGGATATCCCTAGAGCTAGCC +
Preference number: 6 (lower is better)
Translates to: KFCKNALKSTSR*LELARISLELA
Trigger: GGCTAGCTCTAGGGATATCCTGGCCAATTCCAAGCAACGGGATGTAGATTTCAAGGCATTTTTACAAAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000318238.9
ENST00000411955.5
ENST00000437805.5
CDS CAA 72 bp TGGATTATAGGAATAGCTTCCTTGCCAGGTTCCCTCTaGCTGTTATTGATCTCTTCAGGGACTTCTCAAAAA +
Preference number: 6 (lower is better)
Translates to: WIIGIASLPGSL*LLLISSGTSQK
Trigger: TTTTTGAGAAGTCCCTGAAGAGATCAATAACAGCAAGAGGGAACCTGGCAAGGAAGCTATTCCTATAATCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000318238.9
ENST00000411955.5
ENST00000437805.5
ENST00000446033.1
ENST00000446959.5
ENST00000477816.1
CDS TCA 72 bp GTTATACATGTCATATCGTCTCTGGGACTTCTGTGGTaGCCAGTTCTCGGTTTCATAGTTTTTACTATCAGT +
Preference number: 6 (lower is better)
Translates to: VIHVISSLGLLW*PVLGFIVFTIS
Trigger: ACTGATAGTAAAAACTATGAAACCGAGAACTGGTCACCACAGAAGTCCCAGAGACGATATGACATGTATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318238.9
ENST00000411955.5
ENST00000437805.5
CDS CCA 72 bp TTCCAGCATTCCACATTCAATGTGGAGCAAATCCTATaGGGTGTATCTTCAAAATATACCCAGCATTTGACT +
Preference number: 6 (lower is better)
Translates to: FQHSTFNVEQIL*GVSSKYTQHLT
Trigger: AGTCAAATGCTGGGTATATTTTGAAGATACACCCCATAGGATTTGCTCCACATTGAATGTGGAATGCTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000318238.9
ENST00000446033.1
ENST00000477816.1
CDS CCA 72 bp GAGAACATGCATAGCCAGTGTGGTACCTCCACAGCCTaGATGATGATAAAGATTGATGATTTTTGCAAATAT +
Preference number: 6 (lower is better)
Translates to: ENMHSQCGTSTA*MMIKIDDFCKY
Trigger: ATATTTGCAAAAATCATCAATCTTTATCATCATCCAGGCTGTGGAGGTACCACACTGGCTATGCATGTTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000318238.9
ENST00000411955.5
ENST00000437805.5
CDS CAA 90 bp TGTTTCATCTCCATACACCTTGCGCTGTCTTGTAAGCAGAAGAGTTaGAACATCATGTTGAAATTTGTCTCTTCCTATTCCAGAATCATA +
Preference number: 6 (lower is better)
Translates to: CFISIHLALSCKQKS*NIMLKFVSSYSRII
Trigger: TATGATTCTGGAATAGGAAGAGACAAATTTCAACATGATGTTCAAACTCTTCTGCTTACAAGACAGCGCAAGGTGTATGGAGATGAAACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000318238.9
ENST00000411955.5
ENST00000437805.5
CDS TCA 72 bp TTGGACGGTTTTGAATTATCTAATTGTCCCGGATCATaGTTGTCACTTTCAGGGGACTTACTATTCAATTTG +
Preference number: 6 (lower is better)
Translates to: LDGFELSNCPGS*LSLSGDLLFNL
Trigger: CAAATTGAATAGTAAGTCCCCTGAAAGTGACAATCATGATCCGGGACAATTAGATAATTCAAAACCGTCCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000318238.9
ENST00000411955.5
ENST00000437805.5
ENST00000610760.1
CDS TCA 72 bp GGTAGAAAGACACTCTTTCTATGTTCCTACCACTTCTaGGTGGACCTGAATAAACAGATATTACTGGTATTT +
Preference number: 6 (lower is better)
Translates to: GRKTLFLCSYHF*VDLNKQILLVF
Trigger: AAATACCAGTAATATCTGTTTATTCAGGTCCACTCAGAAGTGGTAGGAACATAGAAAGAGTGTCTTTCTACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000318238.9
ENST00000411955.5
ENST00000437805.5
ENST00000610760.1
CDS GCA 72 bp AGGACTAATCCTGTTACTTCTTCACTGAGCAGAATTTaGCCGTATTGCTCATTAATCTTAAGGTCTTCATTT +
Preference number: 6 (lower is better)
Translates to: RTNPVTSSLSRI*PYCSLILRSSF
Trigger: AAATGAAGACCTTAAGATTAATGAGCAATACGGGCAAATTCTGCTCAGTGAAGAAGTAACAGGATTAGTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318238.9
ENST00000411955.5
ENST00000414791.5
ENST00000437805.5
ENST00000439952.5
ENST00000446033.1
ENST00000446959.5
ENST00000610760.1
CDS CCA 72 bp ACACTTTATCTCTCTTCCAGCATTCCACATTCAATGTaGAGCAAATCCTATGGGGTGTATCTTCAAAATATA +
Preference number: 6 (lower is better)
Translates to: TLYLSSSIPHSM*SKSYGVYLQNI
Trigger: TATATTTTGAAGATACACCCCATAGGATTTGCTCCACATTGAATGTGGAATGCTGGAAGAGAGATAAAGTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318238.9
ENST00000446033.1
ENST00000477816.1
CDS CAA 72 bp TCCTGTTACTTCTTCACTGAGCAGAATTTGCCCGTATaGCTCATTAATCTTAAGGTCTTCATTTACCCATTT +
Preference number: 6 (lower is better)
Translates to: SCYFFTEQNLPV*LINLKVFIYPF
Trigger: AAATGGGTAAATGAAGACCTTAAGATTAATGAGCAATACGGGCAAATTCTGCTCAGTGAAGAAGTAACAGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000318238.9
ENST00000411955.5
ENST00000414791.5
ENST00000437805.5
ENST00000439952.5
ENST00000446033.1
ENST00000446959.5
ENST00000610760.1
CDS CAA 72 bp TGTGTTAGGTCATTAACAGTAATGCTCCTACAGTTTTaGTTCCCATCCAACCACCATTTGATTTCACTTTTG +
Preference number: 6 (lower is better)
Translates to: CVRSLTVMLLQF*FPSNHHLISLL
Trigger: CAAAAGTGAAATCAAATGGTGGTTGGATGGGAACAAAAACTGTAGGAGCATTACTGTTAATGACCTAACACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000318238.9
ENST00000411955.5
ENST00000437805.5
CDS CCA 72 bp AAATTACTTCTATATCATATGCCAGAGGGCCTTCAATaGAAAATCCTAGGTAGAAAGACACTCTTTCTATGT +
Preference number: 6 (lower is better)
Translates to: KLLLYHMPEGLQ*KILGRKTLFLC
Trigger: ACATAGAAAGAGTGTCTTTCTACCTAGGATTTTCCATTGAAGGCCCTCTGGCATATGATATAGAAGTAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000318238.9
ENST00000411955.5
ENST00000437805.5
ENST00000610760.1