Pregenerated sensors for SAMD1 (Homo sapiens)
Ensembl gene IDs: ENSG00000141858Ensembl transcript IDs: ENST00000269724.5, ENST00000533683.7, ENST00000673075.1, ENST00000673089.1
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GAGGGTGCCCTCTCCTTGGAATCTGTTATGAGGGCTGAGGGTGTCCCCGTCCAGGGGGCCGGAATGGGCTaGGGCAGGGGTGAGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: EGALSLESVMRAEGVPVQGAGMG*GRGEAG Trigger: CCCAGCCTCACCCCTGCCCCAGCCCATTCCGGCCCC...CTGGACGGGGACACCCTCAGCCCTCATAACAGATTCCAAGGAGAGGGCACCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| 3UTR-3UTR CCA 90 bp | GAGGGTGCCCTCTCCTTGGAATCTGTTATGAGGGCTGAGGGTGTCCCCGTCCAGGACTCTGGGGGATCTTaGGTGAGATGGGGGCCGGAA | + |
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Preference number: 2 (lower is better) Translates to: EGALSLESVMRAEGVPVQDSGGS*VRWGPE Trigger: TTCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTC...CTGGACGGGGACACCCTCAGCCCTCATAACAGATTCCAAGGAGAGGGCACCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| 3UTR-3UTR CCA 90 bp | CAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGAATCTGTGGATCTTGGGTGAGATaGGGGCCGGAATGGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: QTQGAKIRTRGCPLLGICGSWVR*GPEWAG Trigger: CCCAGCCCATTCCGGCCCCCATCTCACCCAAGATCC...ACAGATTCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| 3UTR-3UTR CCA 90 bp | AGACAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGAATCTCCCCGTCCAGCTCCTaGACTCTGGGGGATCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: RQTQGAKIRTRGCPLLGISPSSS*TLGDLG Trigger: CCCAAGATCCCCCAGAGTCCAGGAGCTGGACGGGGA...GATTCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| 3UTR-3UTR CCA 90 bp | CAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGAATCTGTCCAGCTCCTGGACTCTaGGGGATCTTGGGTGAGATG | + |
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Preference number: 2 (lower is better) Translates to: QTQGAKIRTRGCPLLGICPAPGL*GILGEM Trigger: CATCTCACCCAAGATCCCCCAGAGTCCAGGAGCTGG...ACAGATTCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| 3UTR-3UTR CAA 90 bp | GAGGGTGCCCTCTCCTTGGAATCTGTTATGAGGGCTGAGGGTGTCCCCGTCCAGGGACTCTGGGGGATCTaGGGTGAGATGGGGGCCGGA | + |
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Preference number: 3 (lower is better) Translates to: EGALSLESVMRAEGVPVQGLWGI*GEMGAG Trigger: TCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTCC...CTGGACGGGGACACCCTCAGCCCTCATAACAGATTCCAAGGAGAGGGCACCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| 3UTR TCA 72 bp | AGAGGGTGCCCTCTCCTTGGAATCTGTTATGAGGGCTaGGGGTGTCCCCGTCCAGCTCCTGGACTCTGGGGG | + |
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Preference number: 3 (lower is better) Translates to: RGCPLLGICYEG*GCPRPAPGLWG Trigger: CCCCCAGAGTCCAGGAGCTGGACGGGGACACCCTCAGCCCTCATAACAGATTCCAAGGAGAGGGCACCCTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR GCA 90 bp | CCAGCTCCTGGACTCTGGGGGATCTTGGGTGAGATGGGGGCCGGAATGGGCTGGACACAGACCCGCTTCTaGTGGGCGCGCGCGGGGCCG | + |
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Preference number: 4 (lower is better) Translates to: PAPGLWGILGEMGAGMGWTQTRF*WARAGP Trigger: CGGCCCCGCGCGCGCCCAGCAGAAGCGGGTCTGTGT...CCAGCCCATTCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTCCAGGAGCTGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR GCA 90 bp | CCAGCTCCTGGACTCTGGGGGATCTTGGGTGAGATGGGGGCCGGAATGGGCTGGGCACCATCCGGCAGATaGGCTCCAGGTCCGGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: PAPGLWGILGEMGAGMGWAPSGR*APGPAA Trigger: CGCGGCCGGACCTGGAGCGCATCTGCCGGATGGTGC...CCAGCCCATTCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTCCAGGAGCTGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR GCA 90 bp | CAGCTCCTGGACTCTGGGGGATCTTGGGTGAGATGGGGGCCGGAATGGGCTGGGTCCTCCAGCAGCCCCTaGACGCGGCCGCGGGTTAGG | + |
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Preference number: 4 (lower is better) Translates to: QLLDSGGSWVRWGPEWAGSSSSP*TRPRVR Trigger: CCTAACCCGCGGCCGCGTGCAGGGGCTGCTGGAGGA...CCCAGCCCATTCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTCCAGGAGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR CCA 90 bp | CAGCTCCTGGACTCTGGGGGATCTTGGGTGAGATGGGGGCCGGAATGGGCTGGGGCCATGGAGAACACCTaGCGGGTGCCGCTGCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: QLLDSGGSWVRWGPEWAGAMENT*RVPLPG Trigger: CCCGGGCAGCGGCACCCGCCAGGTGTTCTCCATGGC...CCCAGCCCATTCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTCCAGGAGCTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR GCA 90 bp | CCAGCTCCTGGACTCTGGGGGATCTTGGGTGAGATGGGGGCCGGAATGGGCTGGCTCCACCTCTCTTGCTaGGAGACGGGCGGGCGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PAPGLWGILGEMGAGMGWLHLSC*ETGGRW Trigger: CCAGCGCCCGCCCGTCTCGCAGCAAGAGAGGTGGAG...CCAGCCCATTCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTCCAGGAGCTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR GCA 90 bp | GAGGGTGCCCTCTCCTTGGAATCTGTTATGAGGGCTGAGGGTGTCCCCGTCCAGGGTCCGGCCGCGCCTTaGGCGAGCGCAGCGAGTCGA | + |
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Preference number: 4 (lower is better) Translates to: EGALSLESVMRAEGVPVQGPAAP*ASAASR Trigger: TCGACTCGCTGCGCTCGCGCAAGGCGCGGCCGGACC...CTGGACGGGGACACCCTCAGCCCTCATAACAGATTCCAAGGAGAGGGCACCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR TCA 90 bp | CAGCTCCTGGACTCTGGGGGATCTTGGGTGAGATGGGGGCCGGAATGGGCTGGGCTCTCCTTGGCACTCTaGGGTCCCCGCTCGCCGTTA | + |
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Preference number: 4 (lower is better) Translates to: QLLDSGGSWVRWGPEWAGLSLAL*GPRSPL Trigger: TAACGGCGAGCGGGGACCTCAGAGTGCCAAGGAGAG...CCCAGCCCATTCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTCCAGGAGCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR TCA 90 bp | CCAGCTCCTGGACTCTGGGGGATCTTGGGTGAGATGGGGGCCGGAATGGGCTGGGGATGGACAGGCCGGTaGGCACATCTGTGCGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: PAPGLWGILGEMGAGMGWGWTGR*AHLCAA Trigger: TGCAGCGCACAGATGTGCTCACCGGCCTGTCCATCC...CCAGCCCATTCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTCCAGGAGCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR GCA 90 bp | CCAGCTCCTGGACTCTGGGGGATCTTGGGTGAGATGGGGGCCGGAATGGGCTGGCGGAGCACGGCGCGCTaGTGGATCAGTTTCTCGAGC | + |
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Preference number: 4 (lower is better) Translates to: PAPGLWGILGEMGAGMGWRSTAR*WISFSS Trigger: GCTCGAGAAACTGATCCAGCAGCGCGCCGTGCTCCG...CCAGCCCATTCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTCCAGGAGCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR GCA 90 bp | GAGGGTGCCCTCTCCTTGGAATCTGTTATGAGGGCTGAGGGTGTCCCCGTCCAGGCGCTCCGAGACGGGTaGGCTCCAGACGGCCTCGAG | + |
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Preference number: 4 (lower is better) Translates to: EGALSLESVMRAEGVPVQALRDG*APDGLE Trigger: CTCGAGGCCGTCTGGAGCGCACCCGTCTCGGAGCGC...CTGGACGGGGACACCCTCAGCCCTCATAACAGATTCCAAGGAGAGGGCACCCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR CCA 90 bp | CAGCTCCTGGACTCTGGGGGATCTTGGGTGAGATGGGGGCCGGAATGGGCTGGGGGGAGTCTGGCCCGGTaGCAACAGAAGCTGTTCCCC | + |
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Preference number: 4 (lower is better) Translates to: QLLDSGGSWVRWGPEWAGGSLAR*QQKLFP Trigger: GGGGAACAGCTTCTGTTGCCACCGGGCCAGACTCCC...CCCAGCCCATTCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTCCAGGAGCTG 66% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR CCA 90 bp | CCAGCTCCTGGACTCTGGGGGATCTTGGGTGAGATGGGGGCCGGAATGGGCTGGTCCCCGTCCAGCTCCTaGACTCTGGGGGATCTTGGG | + |
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Preference number: 4 (lower is better) Translates to: PAPGLWGILGEMGAGMGWSPSSS*TLGDLG Trigger: CCCAAGATCCCCCAGAGTCCAGGAGCTGGACGGGGA...CCAGCCCATTCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTCCAGGAGCTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR TCA 90 bp | CAGCTCCTGGACTCTGGGGGATCTTGGGTGAGATGGGGGCCGGAATGGGCTGGGAGGGGGTCCACTCCTTaGCCCTCTCCTTGGCACTCT | + |
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Preference number: 4 (lower is better) Translates to: QLLDSGGSWVRWGPEWAGRGSTP*PSPWHS Trigger: AGAGTGCCAAGGAGAGGGTCAAGGAGTGGACCCCCT...CCCAGCCCATTCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTCCAGGAGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR TCA 90 bp | GAGGGTGCCCTCTCCTTGGAATCTGTTATGAGGGCTGAGGGTGTCCCCGTCCAGTGCTCCCCTTGTAGCTaGCCCGGAGCACGGCGCGCT | + |
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Preference number: 4 (lower is better) Translates to: EGALSLESVMRAEGVPVQCSPCS*PGARRA Trigger: AGCGCGCCGTGCTCCGGGTCAGCTACAAGGGGAGCA...CTGGACGGGGACACCCTCAGCCCTCATAACAGATTCCAAGGAGAGGGCACCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR CCA 90 bp | CAGCTCCTGGACTCTGGGGGATCTTGGGTGAGATGGGGGCCGGAATGGGCTGGGTCGCCGTTAAGCTGGTaGTGCTGGGCACCTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: QLLDSGGSWVRWGPEWAGSPLSW*CWAPAG Trigger: TCCTGCAGGTGCCCAGCACCACCAGCTTAACGGCGA...CCCAGCCCATTCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTCCAGGAGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR TCA 90 bp | CAGCTCCTGGACTCTGGGGGATCTTGGGTGAGATGGGGGCCGGAATGGGCTGGGATCTGTTATGAGGGCTaGGGGTGTCCCCGTCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: QLLDSGGSWVRWGPEWAGICYEG*GCPRPA Trigger: AGCTGGACGGGGACACCCTCAGCCCTCATAACAGAT...CCCAGCCCATTCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTCCAGGAGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR GCA 90 bp | GAGGGTGCCCTCTCCTTGGAATCTGTTATGAGGGCTGAGGGTGTCCCCGTCCAGGTGGTGCTGGGCACCTaGAGGACGGTCACTCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: EGALSLESVMRAEGVPVQVVLGT*RTVTLG Trigger: CCCGAGAGTGACCGTCCTGCAGGTGCCCAGCACCAC...CTGGACGGGGACACCCTCAGCCCTCATAACAGATTCCAAGGAGAGGGCACCCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR GCA 90 bp | CAGCTCCTGGACTCTGGGGGATCTTGGGTGAGATGGGGGCCGGAATGGGCTGGGCAGATGGCTTCTCTTTaGGCCCGGGAGGACAGCCAA | + |
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Preference number: 4 (lower is better) Translates to: QLLDSGGSWVRWGPEWAGQMASL*AREDSQ Trigger: TTGGCTGTCCTCCCGGGCGCAAAGAGAAGCCATCTG...CCCAGCCCATTCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTCCAGGAGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR CCA 90 bp | CCAGCTCCTGGACTCTGGGGGATCTTGGGTGAGATGGGGGCCGGAATGGGCTGGGGAGGGTCAGCCACCTaGGGTTTAAGGAGCAATCCC | + |
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Preference number: 4 (lower is better) Translates to: PAPGLWGILGEMGAGMGWGGSAT*GLRSNP Trigger: GGGATTGCTCCTTAAACCCCAGGTGGCTGACCCTCC...CCAGCCCATTCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTCCAGGAGCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR GCA 90 bp | GAGGGTGCCCTCTCCTTGGAATCTGTTATGAGGGCTGAGGGTGTCCCCGTCCAGCAGGTAGGGCTGGTTTaGCTGGGGGCAAAGGCACGG | + |
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Preference number: 4 (lower is better) Translates to: EGALSLESVMRAEGVPVQQVGLV*LGAKAR Trigger: CCGTGCCTTTGCCCCCAGGCAAACCAGCCCTACCTG...CTGGACGGGGACACCCTCAGCCCTCATAACAGATTCCAAGGAGAGGGCACCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR GCA 90 bp | CAGCTCCTGGACTCTGGGGGATCTTGGGTGAGATGGGGGCCGGAATGGGCTGGGTTCCTTGTTCATGGCTaGCATGGAGAACACCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: QLLDSGGSWVRWGPEWAGFLVHG*HGEHLA Trigger: CGCCAGGTGTTCTCCATGGCAGCCATGAACAAGGAA...CCCAGCCCATTCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTCCAGGAGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR CCA 90 bp | CCAGCTCCTGGACTCTGGGGGATCTTGGGTGAGATGGGGGCCGGAATGGGCTGGCCCCTTCCTTGTTCATaGCTGCCATGGAGAACACCT | + |
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Preference number: 4 (lower is better) Translates to: PAPGLWGILGEMGAGMGWPLPCS*LPWRTP Trigger: AGGTGTTCTCCATGGCAGCCATGAACAAGGAAGGGG...CCAGCCCATTCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTCCAGGAGCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR CCA 90 bp | GAGGGTGCCCTCTCCTTGGAATCTGTTATGAGGGCTGAGGGTGTCCCCGTCCAGAGCACGGCGCGCTGCTaGATCAGTTTCTCGAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: EGALSLESVMRAEGVPVQSTARC*ISFSSS Trigger: CGAGCTCGAGAAACTGATCCAGCAGCGCGCCGTGCT...CTGGACGGGGACACCCTCAGCCCTCATAACAGATTCCAAGGAGAGGGCACCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR CCA 90 bp | GAGGGTGCCCTCTCCTTGGAATCTGTTATGAGGGCTGAGGGTGTCCCCGTCCAGTGTTCATGGCTGCCATaGAGAACACCTGGCGGGTGC | + |
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Preference number: 4 (lower is better) Translates to: EGALSLESVMRAEGVPVQCSWLP*RTPGGC Trigger: GCACCCGCCAGGTGTTCTCCATGGCAGCCATGAACA...CTGGACGGGGACACCCTCAGCCCTCATAACAGATTCCAAGGAGAGGGCACCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR CCA 90 bp | GAGGGTGCCCTCTCCTTGGAATCTGTTATGAGGGCTGAGGGTGTCCCCGTCCAGGTAGATTTTCAGGGCTaGCCCGAGGCGGATGGACAG | + |
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Preference number: 4 (lower is better) Translates to: EGALSLESVMRAEGVPVQVDFQG*PEADGQ Trigger: CTGTCCATCCGCCTCGGGCCAGCCCTGAAAATCTAC...CTGGACGGGGACACCCTCAGCCCTCATAACAGATTCCAAGGAGAGGGCACCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR TCA 90 bp | GTGAGACAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGACTGGGGGATCTTGGGTaGGATGGGGGCCGGAATGGG | + |
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Preference number: 4 (lower is better) Translates to: VRQTQGAKIRTRGCPLLGLGDLG*DGGRNG Trigger: CCCATTCCGGCCCCCATCTCACCCAAGATCCCCCAG...TCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTGTCTCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR GCA 90 bp | CAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGAATCTGTTCATCCTGGCCCTGGTaGGGTCCGCAGGGGGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: QTQGAKIRTRGCPLLGICSSWPW*GPQGVH Trigger: GTGGACCCCCTGCGGACCGCACCAGGGCCAGGATGA...ACAGATTCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR GCA 90 bp | CAGCTCCTGGACTCTGGGGGATCTTGGGTGAGATGGGGGCCGGAATGGGCTGGGATAAGGACAAGAGGGTaGCCTCTCCTTGGAATCTGT | + |
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Preference number: 4 (lower is better) Translates to: QLLDSGGSWVRWGPEWAGIRTRG*PLLGIC Trigger: ACAGATTCCAAGGAGAGGGCACCCTCTTGTCCTTAT...CCCAGCCCATTCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTCCAGGAGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR CCA 90 bp | AGACAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGAATCCCTTCATCCTGGCCCTaGTGCGGTCCGCAGGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: RQTQGAKIRTRGCPLLGIPSSWP*CGPQGV Trigger: GACCCCCTGCGGACCGCACCAGGGCCAGGATGAAGG...GATTCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTGTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR CCA 90 bp | CAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGAATCTGTGGGGGACGGGGAGTCTaGCCCGGTGGCAACAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: QTQGAKIRTRGCPLLGICGGRGV*PGGNRS Trigger: GCTTCTGTTGCCACCGGGCCAGACTCCCCGTCCCCC...ACAGATTCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR CCA 90 bp | GAGGGTGCCCTCTCCTTGGAATCTGTTATGAGGGCTGAGGGTGTCCCCGTCCAGAGCGCAGCGAGTCGATaGTGTCCAGGATCCACTCTT | + |
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Preference number: 4 (lower is better) Translates to: EGALSLESVMRAEGVPVQSAASR*CPGSTL Trigger: AAGAGTGGATCCTGGACACCATCGACTCGCTGCGCT...CTGGACGGGGACACCCTCAGCCCTCATAACAGATTCCAAGGAGAGGGCACCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR CCA 90 bp | GTGAGACAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGACGCTCGCCGTTAAGCTaGTGGTGCTGGGCACCTGCA | + |
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Preference number: 4 (lower is better) Translates to: VRQTQGAKIRTRGCPLLGRSPLS*WCWAPA Trigger: TGCAGGTGCCCAGCACCACCAGCTTAACGGCGAGCG...TCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTGTCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR CCA 90 bp | GTGAGACAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGAGGATCTTGGGTGAGATaGGGGCCGGAATGGGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: VRQTQGAKIRTRGCPLLGGSWVR*GPEWAG Trigger: CCCAGCCCATTCCGGCCCCCATCTCACCCAAGATCC...TCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTGTCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR TCA 90 bp | GTGAGACAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGACCCACACCGACGTGCTaGGGAGCAGATGTGTGTGAG | + |
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Preference number: 4 (lower is better) Translates to: VRQTQGAKIRTRGCPLLGPTPTC*GADVCE Trigger: CTCACACACATCTGCTCCTCAGCACGTCGGTGTGGG...TCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTGTCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR CCA 90 bp | GAGGGTGCCCTCTCCTTGGAATCTGTTATGAGGGCTGAGGGTGTCCCCGTCCAGTTTCCTAAAATGTCCTaGACTGGGTGGGGAGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: EGALSLESVMRAEGVPVQFPKMS*TGWGGS Trigger: TGACCCTCCCCACCCAGTCCAGGACATTTTAGGAAA...CTGGACGGGGACACCCTCAGCCCTCATAACAGATTCCAAGGAGAGGGCACCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR GCA 90 bp | GTGAGACAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGATGGAAAGCTGTCGCCTaGTCCGGGAATCCAGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: VRQTQGAKIRTRGCPLLGWKAVA*SGNPAS Trigger: TGAGGCTGGATTCCCGGAGCAGGCGACAGCTTTCCA...TCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTGTCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR GCA 90 bp | GAGGGTGCCCTCTCCTTGGAATCTGTTATGAGGGCTGAGGGTGTCCCCGTCCAGAGCACATCTGTGCGCTaGATGAGCAGCAAAGATTTG | + |
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Preference number: 4 (lower is better) Translates to: EGALSLESVMRAEGVPVQSTSVR*MSSKDL Trigger: CAAATCTTTGCTGCTCATGCAGCGCACAGATGTGCT...CTGGACGGGGACACCCTCAGCCCTCATAACAGATTCCAAGGAGAGGGCACCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR CCA 90 bp | CAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGAATCTGTCTCGACGGGATCAGATaGCTTCTCTTTGCGCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: QTQGAKIRTRGCPLLGICLDGIR*LLFAPG Trigger: CCCGGGCGCAAAGAGAAGCCATCTGATCCCGTCGAG...ACAGATTCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR CCA 90 bp | AGACAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGAATCGACTCTGGGGGATCTTaGGTGAGATGGGGGCCGGAA | + |
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Preference number: 4 (lower is better) Translates to: RQTQGAKIRTRGCPLLGIDSGGS*VRWGPE Trigger: TTCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTC...GATTCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR CCA 90 bp | CAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGAATCTGTTTAAGCTGGTGGTGCTaGGCACCTGCAGGACGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QTQGAKIRTRGCPLLGICLSWWC*APAGRS Trigger: TGACCGTCCTGCAGGTGCCCAGCACCACCAGCTTAA...ACAGATTCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533683.7 |
||
| CDS-3UTR CCA 90 bp | AGACAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGAATCCCAGCTCCTGGACTCTaGGGGATCTTGGGTGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: RQTQGAKIRTRGCPLLGIPAPGL*GILGEM Trigger: CATCTCACCCAAGATCCCCCAGAGTCCAGGAGCTGG...GATTCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533683.7 |
||
| CDS-3UTR TCA 90 bp | GTGAGACAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGACATCTGTGCGCTGCATaGGCAGCAAAGATTTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VRQTQGAKIRTRGCPLLGHLCAA*AAKICH Trigger: ATGGCAAATCTTTGCTGCTCATGCAGCGCACAGATG...TCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTGTCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533683.7 |
||
| CDS-3UTR TCA 90 bp | CAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGAATCTGTTCAAAGTGGCCTTGCTaGAGCACCTTGATGTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QTQGAKIRTRGCPLLGICSKWPC*STLMWC Trigger: GCACCACATCAAGGTGCTTCAGCAAGGCCACTTTGA...ACAGATTCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533683.7 |
||
| CDS-3UTR TCA 90 bp | GTGAGACAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGACACTTCAGAGCCCTCTaGCACATCATCTTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: VRQTQGAKIRTRGCPLLGHFRAL*HIIFFI Trigger: GATGAAGAAGATGATGTGTCAGAGGGCTCTGAAGTG...TCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTGTCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533683.7 |
||
| CDS-3UTR TCA 90 bp | GTGAGACAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGACTTGCTGAAGCACCTTaGTGTGGTGCTCGTAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: VRQTQGAKIRTRGCPLLGLAEAP*CGARRF Trigger: AAATCTACGAGCACCACATCAAGGTGCTTCAGCAAG...TCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTGTCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533683.7 |
||
| CDS-3UTR CCA 90 bp | CAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGAATCTGTTCAATTTCCTGCTCTTaGAAAGCTGTCGCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTQGAKIRTRGCPLLGICSISCS*KAVACS Trigger: GGAGCAGGCGACAGCTTTCCAAGAGCAGGAAATTGA...ACAGATTCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533683.7 |
||
| CDS-3UTR GCA 90 bp | CAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGAATCTGTTTGCCATCAATTTCCTaGTCTTGGAAAGCTGTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: QTQGAKIRTRGCPLLGICLPSIS*SWKAVA Trigger: GGCGACAGCTTTCCAAGAGCAGGAAATTGATGGCAA...ACAGATTCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533683.7 |
||
| CDS GCA 90 bp | TGCGCTCCGGCTCCGGGCCGTGCCGCCGCCGCACCATCCGGCAGATaGGCTCCAGGTCCGGCCGCGCCTTGCGCGAGCGCAGCGAGTCGA | + |
|
Preference number: 5 (lower is better) Translates to: CAPAPGRAAAAPSGR*APGPAAPCASAASR Trigger: TCGACTCGCTGCGCTCGCGCAAGGCGCGGCCGGACCTGGAGCGCATCTGCCGGATGGTGCGGCGGCGGCACGGCCCGGAGCCGGAGCGCA 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
||
| CDS GCA 90 bp | GTCCGGGCCTGTCCCCGCGGGGCAGCGCAAGCGCTCCGAGACGGGTaGGCTCCAGACGGCCTCGAGCCGCCGCCTCCTCCTCCAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VRACPRGAAQALRDG*APDGLEPPPPPPAA Trigger: GGCTGCTGGAGGAGGAGGCGGCGGCTCGAGGCCGTCTGGAGCGCACCCGTCTCGGAGCGCTTGCGCTGCCCCGCGGGGACAGGCCCGGAC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
||
| CDS CCA 90 bp | GTACTCGCTCTTCTCCACCTCTCTTGCTGCGAGACGGGCGGGCGCTaGCGGCCGGCGGCGCCCGTCCGGGCCTGTCCCCGCGGGGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: VLALLHLSCCETGGR*RPAAPVRACPRGAA Trigger: CGCTGCCCCGCGGGGACAGGCCCGGACGGGCGCCGCCGGCCGCCAGCGCCCGCCCGTCTCGCAGCAAGAGAGGTGGAGAAGAGCGAGTAC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
||
| CDS GCA 90 bp | ATCAGTTTCTCGAGCTCGGCGCGCGTGCGCTCCGGCTCCGGGCCGTaGCGCCGCCGCACCATCCGGCAGATGCGCTCCAGGTCCGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: ISFSSSARVRSGSGP*RRRTIRQMRSRSGR Trigger: GCGGCCGGACCTGGAGCGCATCTGCCGGATGGTGCGGCGGCGGCACGGCCCGGAGCCGGAGCGCACGCGCGCCGAGCTCGAGAAACTGAT 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
||
| CDS GCA 90 bp | CTTCCTTGTTCATGGCTGCCATGGAGAACACCTGGCGGGTGCCGCTaGCCGGGGCTGGCCCCCGCCCTTCATCCTGGCCCTGGTGCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LPCSWLPWRTPGGCR*PGLAPALHPGPGAV Trigger: GACCGCACCAGGGCCAGGATGAAGGGCGGGGGCCAGCCCCGGGCAGCGGCACCCGCCAGGTGTTCTCCATGGCAGCCATGAACAAGGAAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000269724.5 ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
||
| CDS GCA 90 bp | GCCGCCGCACCATCCGGCAGATGCGCTCCAGGTCCGGCCGCGCCTTaGGCGAGCGCAGCGAGTCGATGGTGTCCAGGATCCACTCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: AAAPSGRCAPGPAAP*ASAASRWCPGSTLG Trigger: ACCAAGAGTGGATCCTGGACACCATCGACTCGCTGCGCTCGCGCAAGGCGCGGCCGGACCTGGAGCGCATCTGCCGGATGGTGCGGCGGC 70% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
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| CDS CCA 90 bp | TGCGCTCCAGGTCCGGCCGCGCCTTGCGCGAGCGCAGCGAGTCGATaGTGTCCAGGATCCACTCTTGGTAGTGCGGGGAAGCGGCGGACG | + |
|
Preference number: 5 (lower is better) Translates to: CAPGPAAPCASAASR*CPGSTLGSAGKRRT Trigger: CGTCCGCCGCTTCCCCGCACTACCAAGAGTGGATCCTGGACACCATCGACTCGCTGCGCTCGCGCAAGGCGCGGCCGGACCTGGAGCGCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
||
| CDS TCA 90 bp | GCTGGACGCGCGCCGCGTTGCGGTACGAGATGCTCCCCTTGTAGCTaGCCCGGAGCACGGCGCGCTGCTGGATCAGTTTCTCGAGCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: AGRAPRCGTRCSPCS*PGARRAAGSVSRAR Trigger: CCGAGCTCGAGAAACTGATCCAGCAGCGCGCCGTGCTCCGGGTCAGCTACAAGGGGAGCATCTCGTACCGCAACGCGGCGCGCGTCCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
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| CDS TCA 90 bp | TGCGGTCCGCAGGGGGTCCACTCCTTGACCCTCTCCTTGGCACTCTaGGGTCCCCGCTCGCCGTTAAGCTGGTGGTGCTGGGCACCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: CGPQGVHSLTLSLAL*GPRSPLSWWCWAPA Trigger: TGCAGGTGCCCAGCACCACCAGCTTAACGGCGAGCGGGGACCTCAGAGTGCCAAGGAGAGGGTCAAGGAGTGGACCCCCTGCGGACCGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000269724.5 ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
||
| CDS-3UTR CAA 90 bp | CAGCTCCTGGACTCTGGGGGATCTTGGGTGAGATGGGGGCCGGAATGGGCTGGGGTCCAGGATCCACTCTaGGTAGTGCGGGGAAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: QLLDSGGSWVRWGPEWAGVQDPL*VVRGSG Trigger: GCCGCTTCCCCGCACTACCAAGAGTGGATCCTGGAC...CCCAGCCCATTCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTCCAGGAGCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR CAA 90 bp | CCAGCTCCTGGACTCTGGGGGATCTTGGGTGAGATGGGGGCCGGAATGGGCTGGTCAGATGGCTTCTCTTaGCGCCCGGGAGGACAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PAPGLWGILGEMGAGMGWSDGFS*RPGGQP Trigger: TGGCTGTCCTCCCGGGCGCAAAGAGAAGCCATCTGA...CCAGCCCATTCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTCCAGGAGCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000533683.7 |
||
| CDS-3UTR CAA 90 bp | CCAGCTCCTGGACTCTGGGGGATCTTGGGTGAGATGGGGGCCGGAATGGGCTGGGCTGTTCCCCCTTCCTaGTTCATGGCTGCCATGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PAPGLWGILGEMGAGMGWAVPPS*FMAAME Trigger: CTCCATGGCAGCCATGAACAAGGAAGGGGGAACAGC...CCAGCCCATTCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTCCAGGAGCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000533683.7 |
||
| CDS-3UTR CAA 90 bp | CAGCTCCTGGACTCTGGGGGATCTTGGGTGAGATGGGGGCCGGAATGGGCTGGGGAGGGTGCCCTCTCCTaGGAATCTGTTATGAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QLLDSGGSWVRWGPEWAGEGALS*ESVMRA Trigger: AGCCCTCATAACAGATTCCAAGGAGAGGGCACCCTC...CCCAGCCCATTCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTCCAGGAGCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS CCA 90 bp | GCCTTGCTGAAGCACCTTGATGTGGTGCTCGTAGATTTTCAGGGCTaGCCCGAGGCGGATGGACAGGCCGGTGAGCACATCTGTGCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ALLKHLDVVLVDFQG*PEADGQAGEHICAL Trigger: CAGCGCACAGATGTGCTCACCGGCCTGTCCATCCGCCTCGGGCCAGCCCTGAAAATCTACGAGCACCACATCAAGGTGCTTCAGCAAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000269724.5 ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
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| CDS-3UTR CAA 90 bp | AGACAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGAATCTGGACGCGCGCCGCGTaGCGGTACGAGATGCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RQTQGAKIRTRGCPLLGIWTRAA*RYEMLP Trigger: GGGGAGCATCTCGTACCGCAACGCGGCGCGCGTCCA...GATTCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS TCA 90 bp | AGCCATCGGGGTCATCATCCTCAAAGTGGCCTTGCTGAAGCACCTTaGTGTGGTGCTCGTAGATTTTCAGGGCTGGCCCGAGGCGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: SHRGHHPQSGLAEAP*CGARRFSGLARGGW Trigger: CCATCCGCCTCGGGCCAGCCCTGAAAATCTACGAGCACCACATCAAGGTGCTTCAGCAAGGCCACTTTGAGGATGATGACCCCGATGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
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| CDS-3UTR CAA 90 bp | AGACAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGAATCTCTTCTCCACCTCTCTaGCTGCGAGACGGGCGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RQTQGAKIRTRGCPLLGISSPPL*LRDGRA Trigger: CGCCCGCCCGTCTCGCAGCAAGAGAGGTGGAGAAGA...GATTCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS-3UTR CAA 90 bp | CAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGAATCTGTGGACTCTGGGGGATCTaGGGTGAGATGGGGGCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: QTQGAKIRTRGCPLLGICGLWGI*GEMGAG Trigger: TCCGGCCCCCATCTCACCCAAGATCCCCCAGAGTCC...ACAGATTCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS GCA 90 bp | GCTGGCCCGAGGCGGATGGACAGGCCGGTGAGCACATCTGTGCGCTaGATGAGCAGCAAAGATTTGCCATCAATTTCCTGCTCTTGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: AGPRRMDRPVSTSVR*MSSKDLPSISCSWK Trigger: TTTCCAAGAGCAGGAAATTGATGGCAAATCTTTGCTGCTCATGCAGCGCACAGATGTGCTCACCGGCCTGTCCATCCGCCTCGGGCCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000269724.5 ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
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| CDS-3UTR CAA 90 bp | GTGAGACAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGAATCAATTTCCTGCTCTaGGAAAGCTGTCGCCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VRQTQGAKIRTRGCPLLGINFLL*ESCRLL Trigger: GAGCAGGCGACAGCTTTCCAAGAGCAGGAAATTGAT...TCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTGTCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533683.7 |
||
| CDS-3UTR CAA 90 bp | GTGAGACAGACACAAGGGGCAAAGATAAGGACAAGAGGGTGCCCTCTCCTTGGAATGAGCAGCAAAGATTaGCCATCAATTTCCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VRQTQGAKIRTRGCPLLGMSSKD*PSISCS Trigger: AGAGCAGGAAATTGATGGCAAATCTTTGCTGCTCAT...TCCAAGGAGAGGGCACCCTCTTGTCCTTATCTTTGCCCCTTGTGTCTGTCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533683.7 |
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| CDS GCA 72 bp | GCTCCGGGCCGTGCCGCCGCCGCACCATCCGGCAGATaGGCTCCAGGTCCGGCCGCGCCTTGCGCGAGCGCA | + |
|
Preference number: 6 (lower is better) Translates to: APGRAAAAPSGR*APGPAAPCASA Trigger: TGCGCTCGCGCAAGGCGCGGCCGGACCTGGAGCGCATCTGCCGGATGGTGCGGCGGCGGCACGGCCCGGAGC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
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| CDS GCA 72 bp | CGCGGCCGCGGGTTAGGCGACCGCCGGCGCCGCCGCTaGCCCCGAGGTAGCGCACGACTTCCCGCAGGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RGRGLGDRRRRR*PRGSARLPAGS Trigger: TGAGCCTGCGGGAAGTCGTGCGCTACCTCGGGGGCAGCGGCGGCGCCGGCGGTCGCCTAACCCGCGGCCGCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
||
| CDS CCA 72 bp | CTTCTCCACCTCTCTTGCTGCGAGACGGGCGGGCGCTaGCGGCCGGCGGCGCCCGTCCGGGCCTGTCCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LLHLSCCETGGR*RPAAPVRACPR Trigger: GCGGGGACAGGCCCGGACGGGCGCCGCCGGCCGCCAGCGCCCGCCCGTCTCGCAGCAAGAGAGGTGGAGAAG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
||
| CDS GCA 72 bp | TGTCCCCGCGGGGCAGCGCAAGCGCTCCGAGACGGGTaGGCTCCAGACGGCCTCGAGCCGCCGCCTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CPRGAAQALRDG*APDGLEPPPPP Trigger: AGGAGGAGGCGGCGGCTCGAGGCCGTCTGGAGCGCACCCGTCTCGGAGCGCTTGCGCTGCCCCGCGGGGACA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
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| CDS CAA 90 bp | CGCCTTGCGCGAGCGCAGCGAGTCGATGGTGTCCAGGATCCACTCTaGGTAGTGCGGGGAAGCGGCGGACGACGAGGCGGCGGCCGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: RLARAQRVDGVQDPL*VVRGSGGRRGGGRR Trigger: ACGGCGGCCGCCGCCTCGTCGTCCGCCGCTTCCCCGCACTACCAAGAGTGGATCCTGGACACCATCGACTCGCTGCGCTCGCGCAAGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
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| CDS CAA 90 bp | CGCCGCCGCACCATCCGGCAGATGCGCTCCAGGTCCGGCCGCGCCTaGCGCGAGCGCAGCGAGTCGATGGTGTCCAGGATCCACTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: RRRTIRQMRSRSGRA*RERSESMVSRIHSW Trigger: CCAAGAGTGGATCCTGGACACCATCGACTCGCTGCGCTCGCGCAAGGCGCGGCCGGACCTGGAGCGCATCTGCCGGATGGTGCGGCGGCG 71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
||
| CDS CAA 72 bp | ACCATCCGGCAGATGCGCTCCAGGTCCGGCCGCGCCTaGCGCGAGCGCAGCGAGTCGATGGTGTCCAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: TIRQMRSRSGRA*RERSESMVSRI Trigger: GATCCTGGACACCATCGACTCGCTGCGCTCGCGCAAGGCGCGGCCGGACCTGGAGCGCATCTGCCGGATGGT 69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
||
| CDS CCA 72 bp | GGTCCGGCCGCGCCTTGCGCGAGCGCAGCGAGTCGATaGTGTCCAGGATCCACTCTTGGTAGTGCGGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GPAAPCASAASR*CPGSTLGSAGK Trigger: CTTCCCCGCACTACCAAGAGTGGATCCTGGACACCATCGACTCGCTGCGCTCGCGCAAGGCGCGGCCGGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
||
| CDS CAA 72 bp | CGAGCGCAGCGAGTCGATGGTGTCCAGGATCCACTCTaGGTAGTGCGGGGAAGCGGCGGACGACGAGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RAQRVDGVQDPL*VVRGSGGRRGG Trigger: GCCGCCTCGTCGTCCGCCGCTTCCCCGCACTACCAAGAGTGGATCCTGGACACCATCGACTCGCTGCGCTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
||
| CDS TCA 72 bp | CAGGGGGTCCACTCCTTGACCCTCTCCTTGGCACTCTaGGGTCCCCGCTCGCCGTTAAGCTGGTGGTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: QGVHSLTLSLAL*GPRSPLSWWCW Trigger: CCAGCACCACCAGCTTAACGGCGAGCGGGGACCTCAGAGTGCCAAGGAGAGGGTCAAGGAGTGGACCCCCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000269724.5 ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
||
| CDS TCA 72 bp | GCGCCGCGTTGCGGTACGAGATGCTCCCCTTGTAGCTaGCCCGGAGCACGGCGCGCTGCTGGATCAGTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: APRCGTRCSPCS*PGARRAAGSVS Trigger: AGAAACTGATCCAGCAGCGCGCCGTGCTCCGGGTCAGCTACAAGGGGAGCATCTCGTACCGCAACGCGGCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
||
| CDS CAA 72 bp | ATCACGGTCCACTCGACGGGATCAGATGGCTTCTCTTaGCGCCCGGGAGGACAGCCAAAGGGGGTCCCGTCG | + |
|
Preference number: 6 (lower is better) Translates to: ITVHSTGSDGFS*RPGGQPKGVPS Trigger: CGACGGGACCCCCTTTGGCTGTCCTCCCGGGCGCAAAGAGAAGCCATCTGATCCCGTCGAGTGGACCGTGAT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000269724.5 ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
||
| CDS CCA 72 bp | CGGTGGCAACAGAAGCTGTTCCCCCTTCCTTGTTCATaGCTGCCATGGAGAACACCTGGCGGGTGCCGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RWQQKLFPLPCS*LPWRTPGGCRC Trigger: GCAGCGGCACCCGCCAGGTGTTCTCCATGGCAGCCATGAACAAGGAAGGGGGAACAGCTTCTGTTGCCACCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000269724.5 ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
||
| CDS CCA 72 bp | AAGCACCTTGATGTGGTGCTCGTAGATTTTCAGGGCTaGCCCGAGGCGGATGGACAGGCCGGTGAGCACATC | + |
|
Preference number: 6 (lower is better) Translates to: KHLDVVLVDFQG*PEADGQAGEHI Trigger: GATGTGCTCACCGGCCTGTCCATCCGCCTCGGGCCAGCCCTGAAAATCTACGAGCACCACATCAAGGTGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000269724.5 ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
||
| CDS GCA 72 bp | AGGCGGATGGACAGGCCGGTGAGCACATCTGTGCGCTaGATGAGCAGCAAAGATTTGCCATCAATTTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: RRMDRPVSTSVR*MSSKDLPSISC Trigger: GCAGGAAATTGATGGCAAATCTTTGCTGCTCATGCAGCGCACAGATGTGCTCACCGGCCTGTCCATCCGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000269724.5 ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
||
| CDS TCA 72 bp | GGTCATCATCCTCAAAGTGGCCTTGCTGAAGCACCTTaGTGTGGTGCTCGTAGATTTTCAGGGCTGGCCCGA | + |
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Preference number: 6 (lower is better) Translates to: GHHPQSGLAEAP*CGARRFSGLAR Trigger: TCGGGCCAGCCCTGAAAATCTACGAGCACCACATCAAGGTGCTTCAGCAAGGCCACTTTGAGGATGATGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000269724.5 ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
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| CDS CAA 72 bp | GTGAGCACATCTGTGCGCTGCATGAGCAGCAAAGATTaGCCATCAATTTCCTGCTCTTGGAAAGCTGTCGCC | + |
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Preference number: 6 (lower is better) Translates to: VSTSVRCMSSKD*PSISCSWKAVA Trigger: GGCGACAGCTTTCCAAGAGCAGGAAATTGATGGCAAATCTTTGCTGCTCATGCAGCGCACAGATGTGCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000269724.5 ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
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| CDS GCA 72 bp | TTGCCATCAATTTCCTGCTCTTGGAAAGCTGTCGCCTaGTCCGGGAATCCAGCCTCAGTAAAATATTCGACG | + |
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Preference number: 6 (lower is better) Translates to: LPSISCSWKAVA*SGNPASVKYST Trigger: CGTCGAATATTTTACTGAGGCTGGATTCCCGGAGCAGGCGACAGCTTTCCAAGAGCAGGAAATTGATGGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000269724.5 ENST00000533683.7 ENST00000673075.1 ENST00000673089.1 |
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