RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SALL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000165821

Ensembl transcript IDs: ENST00000450879.2, ENST00000537235.2, ENST00000541965.1, ENST00000546363.5, ENST00000611430.4, ENST00000613414.4, ENST00000614342.1

Found 865 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCCTGGGAGACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTaGGAGGTCATCATGAATGAGAAGCTGGAGAGGTCTTGGCACACT +
Preference number: 1 (lower is better)
Translates to: LLGDLLARNQLVSQL*EVIMNEKLERSWHT
Trigger: AGTGTGCCAAGACCTCTCCAGCTTCTCATTCATGATGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
3UTR-3UTR CCA 90 bp TGGCTTCCCTGGATCCCATTGTTGGAGGCACCTTCCCAGCCACAGTTCCTAGGCAATTCCAGGGCTTCATaGGCAGGCCATTTGACAGGA +
Preference number: 2 (lower is better)
Translates to: WLPWIPLLEAPSQPQFLGNSRAS*AGHLTG
Trigger: TCCTGTCAAATGGCCTGCCCATGAAGCCCTGGAATT...GCCTAGGAACTGTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
3UTR-3UTR CCA 90 bp AGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCAGTACCGGCACCTTCTaGAGCAGGGGGAGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: SWRGLGTLTSQNLYLNVTSTGTF*SRGRKK
Trigger: CTTCTTCCTCCCCCTGCTCCAGAAGGTGCCGGTACT...GGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
3UTR-3UTR CCA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGTCACACCAGGGAAGCTaGAGAGGGTTCCCCTTGAGA +
Preference number: 2 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLSHQGS*RGFPLR
Trigger: TCTCAAGGGGAACCCTCTCCAGCTTCCCTGGTGTGA...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
3UTR CAA 90 bp GAGGGGGAAGAAGGGTCACACCAGGGAAGCTGGAGAGGGTTCCCCTaGAGAAAGCTGCAGAGAATCTATGTTCCTCAGGTACAAAGAATG +
Preference number: 2 (lower is better)
Translates to: EGEEGSHQGSWRGFP*RKLQRIYVPQVQRM
Trigger: CATTCTTTGTACCTGAGGAACATAGATTCTCTGCAGCTTTCTCAAGGGGAACCCTCTCCAGCTTCCCTGGTGTGACCCTTCTTCCCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
3UTR-3UTR CCA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGTACCGGCACCTTCTaGAGCAGGGGGAGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTISTGTF*SRGRKK
Trigger: CTTCTTCCTCCCCCTGCTCCAGAAGGTGCCGGTACT...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
3UTR-3UTR CCA 90 bp GGGGGCCATCCCCTTGTAAGCACAGTAATTTCCAAGCTCAGGGACTACAGAAAATGGGTCACCAATTACTaGAGCATCTTCAGTACCGGC +
Preference number: 2 (lower is better)
Translates to: GGHPLVSTVISKLRDYRKWVTNY*SIFSTG
Trigger: GCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA...TTTTCTGTAGTCCCTGAGCTTGGAAATTACTGTGCTTACAAGGGGATGGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
3UTR-3UTR TCA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGTGGGAGGTCCTTTTGTaGAGCTGTTTCTGCTCTGTG +
Preference number: 2 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVWEVLL*SCFCSV
Trigger: CACAGAGCAGAAACAGCTTCACAAAAGGACCTCCCA...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
3UTR-3UTR CCA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCTGGGTCACCAATTACTaGAGCATCTTCAGTACCGGC +
Preference number: 2 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTIWVTNY*SIFSTG
Trigger: GCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
3UTR-3UTR CCA 90 bp TCCTGGGAGACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTGAGAGGTCAAAGCTGGAGAGGTCTTaGCACACTGACCAGCCAAAA +
Preference number: 2 (lower is better)
Translates to: SWETSWQEISLFPNFERSKLERS*HTDQPK
Trigger: TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTT...TGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
3UTR-3UTR TCA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGCTTGTTTCCCAACTTTaGGAGGTCATCATGAATGAG +
Preference number: 2 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLLVSQL*EVIMNE
Trigger: CTCATTCATGATGACCTCTCAAAGTTGGGAAACAAG...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
3UTR-3UTR CCA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGTCCTGGGAGACCTCTTaGCAAGAAATCAGCTTGTTT +
Preference number: 2 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVSWETS*QEISLF
Trigger: AAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
3UTR-3UTR TCA 90 bp TCCTGGGAGACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTGAGAGGTCAACCTTTACCTTAATGTaGCCATCAGGGGATTTACTG +
Preference number: 2 (lower is better)
Translates to: SWETSWQEISLFPNFERSTFTLM*PSGDLL
Trigger: CAGTAAATCCCCTGATGGTCACATTAAGGTAAAGGT...TGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
3UTR-3UTR TCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCGAGGTCTTGGCACACTaGCCAGCCAAAACCTTTACC +
Preference number: 2 (lower is better)
Translates to: VLATFLNSLIISSSTMLTEVLAH*PAKTFT
Trigger: GGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTC...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
3UTR-3UTR TCA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGCTTGTTTCCCAACTTTaGGAGGTCATCATGAATGAG +
Preference number: 2 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVLVSQL*EVIMNE
Trigger: CTCATTCATGATGACCTCTCAAAGTTGGGAAACAAG...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
3UTR-3UTR CCA 90 bp TTCATCAACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCAGTACCGGCACCTTCTaGAGCAGGGGGAGGAAGAAG +
Preference number: 2 (lower is better)
Translates to: FINHADQKCSLKIRTSHFSTGTF*SRGRKK
Trigger: CTTCTTCCTCCCCCTGCTCCAGAAGGTGCCGGTACT...GAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
3UTR-3UTR CCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCAAGCTGGAGAGGTCTTaGCACACTGACCAGCCAAAA +
Preference number: 2 (lower is better)
Translates to: VLATFLNSLIISSSTMLTKLERS*HTDQPK
Trigger: TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTT...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
3UTR-3UTR TCA 90 bp TTCATCAACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCGGAGAGGGTTCCCCTTaGGAAAGCTGCAGAGAATCT +
Preference number: 2 (lower is better)
Translates to: FINHADQKCSLKIRTSHFGEGSP*ESCRES
Trigger: AGATTCTCTGCAGCTTTCTCAAGGGGAACCCTCTCC...GAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
3UTR-3UTR GCA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGAAGGAATGTACAGTTTaGTACTTCTTGTCTATGATG +
Preference number: 2 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVKECTV*YFLSMM
Trigger: CATCATAGACAAGAAGTAGCAAACTGTACATTCCTT...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000537235.2
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
3UTR-3UTR CCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCTCCTGGGAGACCTCTTaGCAAGAAATCAGCTTGTTT +
Preference number: 2 (lower is better)
Translates to: VLATFLNSLIISSSTMLTSWETS*QEISLF
Trigger: AAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
3UTR-3UTR TCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCGTTCATCAACCATGCTaGCCAAAAATGCTCCTTAAA +
Preference number: 2 (lower is better)
Translates to: VLATFLNSLIISSSTMLTVHQPC*PKMLLK
Trigger: TTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAAC...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
3UTR GCA 72 bp AGCCCTTTTTGGCTAGGCTGCAATGCCAAATGTAGGTaGTCAGGTGCACCTACCAAAGGGAAAGGGAGAGGA +
Preference number: 3 (lower is better)
Translates to: SPFWLGCNAKCR*SGAPTKGKGRG
Trigger: TCCTCTCCCTTTCCCTTTGGTAGGTGCACCTGAGCACCTACATTTGGCATTGCAGCCTAGCCAAAAAGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
3UTR-3UTR CAA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGCCCTACTTCCTAGGGTaGGGTCACCAATTACTGGAG +
Preference number: 3 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLPYFLG*GHQLLE
Trigger: CTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGG...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
3UTR-3UTR CAA 90 bp AGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCCCCTACTTCCTAGGGTaGGGTCACCAATTACTGGAG +
Preference number: 3 (lower is better)
Translates to: SWRGLGTLTSQNLYLNVTPYFLG*GHQLLE
Trigger: CTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGG...GGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
3UTR-3UTR CAA 90 bp GAGGTCATCATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCCTACTTCCTAGGGTaGGGTCACCAATTACTGGAG +
Preference number: 3 (lower is better)
Translates to: EVIMNEKLERSWHTDQPKPYFLG*GHQLLE
Trigger: CTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGG...TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCATGATGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
3UTR-3UTR CAA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCCCCTACTTCCTAGGGTaGGGTCACCAATTACTGGAG +
Preference number: 3 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTIPYFLG*GHQLLE
Trigger: CTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGG...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
3UTR TCA 72 bp GACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTaGGAGGTCATCATGAATGAGAAGCTGGAGAGGTCT +
Preference number: 3 (lower is better)
Translates to: DLLARNQLVSQL*EVIMNEKLERS
Trigger: AGACCTCTCCAGCTTCTCATTCATGATGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
3UTR CCA 72 bp ACTTCACATTTCCCAAATATCTCCTGGGAGACCTCTTaGCAAGAAATCAGCTTGTTTCCCAACTTTGAGAGG +
Preference number: 3 (lower is better)
Translates to: TSHFPNISWETS*QEISLFPNFER
Trigger: CCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGAGATATTTGGGAAATGTGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
3UTR-3UTR CAA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATTGGCAAGAAATCAGCTaGTTTCCCAACTTTGAGAGG +
Preference number: 3 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNWQEIS*FPNFER
Trigger: CCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCA...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR GCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGCCCAGCTGTGGCTGCTaGCGCCACTGTCCCCACCTC +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGEPSCGC*RHCPHL
Trigger: GAGGTGGGGACAGTGGCGGCAGCAGCCACAGCTGGG...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGCCCAGCTGTGGCTGCTaGCGCCACTGTCCCCACCTC +
Preference number: 4 (lower is better)
Translates to: WVTNYWSIFSTGTFWSRGPSCGC*RHCPHL
Trigger: GAGGTGGGGACAGTGGCGGCAGCAGCCACAGCTGGG...CCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGGGCTGCTGGGACTGCTaGTGGGGGAAACTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: VTNYWSIFSTGTFWSRGRGCWDC*WGKLRA
Trigger: GGCACGGAGTTTCCCCCAGCAGCAGTCCCAGCAGCC...CCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGCCCAGCGGCCCAGACTaGGGAGATGGAGATCGGCAG +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGEPSGPD*GDGDRQ
Trigger: CTGCCGATCTCCATCTCCGCAGTCTGGGCCGCTGGG...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000611430.4
CDS-3UTR CCA 90 bp CACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAAGTGCAGGGGCAGAGGTaGTGGGGGCTCCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: HQLLEHLQYRHLLEQGEEVQGQR*WGLLRQ
Trigger: CTGCCTCAGGAGCCCCCACCACCTCTGCCCCTGCAC...TTCCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGCCCAGACTGCGGAGATaGAGATCGGCAGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGPRLRR*RSAAAG
Trigger: CCCCGCCGCTGCCGATCTCCATCTCCGCAGTCTGGG...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000611430.4
CDS-3UTR TCA 90 bp GGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGCACTCCACTGATGGCTaGGCCCTCACTCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GLGHQLLEHLQYRHLLEQHSTDG*ALTPWG
Trigger: CCCCCAGGGAGTGAGGGCTCAGCCATCAGTGGAGTG...CTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGTCCACCTGGAGTGGCTaGCTCCTCCTCGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: WVTNYWSIFSTGTFWSRGSTWSG*LLLGLL
Trigger: GAGAAGGCCGAGGAGGAGGCAGCCACTCCAGGTGGA...CCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGTCCACCTGGAGTGGCTaGCTCCTCCTCGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGESTWSG*LLLGLL
Trigger: GAGAAGGCCGAGGAGGAGGCAGCCACTCCAGGTGGA...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp CCTTGGCTTCCCTGGATCCCATTGTTGGAGGCACCTTCCCAGCCACAGTTCCTACTGGAGCCGTGGCTGTaGCTGCACTGGTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: PWLPWIPLLEAPSQPQFLLEPWL*LHWWRA
Trigger: TGCTCTCCACCAGTGCAGGCACAGCCACGGCTCCAG...TAGGAACTGTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAGCCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp GTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGCTGGAGCCGTGGCTGTaGCTGCACTGGTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: VTNYWSIFSTGTFWSRGRLEPWL*LHWWRA
Trigger: TGCTCTCCACCAGTGCAGGCACAGCCACGGCTCCAG...CCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp CACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAACGTGCGCCATGGTTGTaGGGGAAGTGGAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: HQLLEHLQYRHLLEQGEERAPWL*GKWRAR
Trigger: CCTGGCCCTCCACTTCCCCCACAACCATGGCGCACG...TTCCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS-3UTR CCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGCCCAGGTGGGATCCGTaGGCACGGAGGACCCAGAAT +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGEPRWDP*ARRTQN
Trigger: ATTCTGGGTCCTCCGTGCCCACGGATCCCACCTGGG...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCATCTCTGGGCCCCAGGTaGGATCCGTGGGCACGGAGG +
Preference number: 4 (lower is better)
Translates to: RVGSPITGASSVPAPSGASLGPR*DPWARR
Trigger: CCTCCGTGCCCACGGATCCCACCTGGGGCCCAGAGA...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGTGGCTTCAGGAGCCCTaGGGAGGCAGTGGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGEWLQEP*GGSGLK
Trigger: CTTGAGGCCACTGCCTCCCCAGGGCTCCTGAAGCCA...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp CCTTGGCTTCCCTGGATCCCATTGTTGGAGGCACCTTCCCAGCCACAGTTCCTATCTCCTTCCCAGCTGTaGCTGCTGCCGCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: PWLPWIPLLEAPSQPQFLSPSQL*LLPPLS
Trigger: GGACAGTGGCGGCAGCAGCCACAGCTGGGAAGGAGA...TAGGAACTGTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAGCCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp TGGCTTCCCTGGATCCCATTGTTGGAGGCACCTTCCCAGCCACAGTTCCTAGGCGGGTTGCTCCCAGCTTaGGACTGGCCAAGATCAGGC +
Preference number: 4 (lower is better)
Translates to: WLPWIPLLEAPSQPQFLGGLLPA*DWPRSG
Trigger: GCCTGATCTTGGCCAGTCCCAAGCTGGGAGCAACCC...GCCTAGGAACTGTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp TGGCTTCCCTGGATCCCATTGTTGGAGGCACCTTCCCAGCCACAGTTCCTAGGCGACGCCACCTGGAGCTaGTCTCCCAAAGTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: WLPWIPLLEAPSQPQFLGDATWS*SPKVWD
Trigger: GTCCCAGACTTTGGGAGACCAGCTCCAGGTGGCGTC...GCCTAGGAACTGTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp TGGCTTCCCTGGATCCCATTGTTGGAGGCACCTTCCCAGCCACAGTTCCTAGGCAGGGAGGACGCCACCTaGAGCTGGTCTCCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: WLPWIPLLEAPSQPQFLGREDAT*SWSPKV
Trigger: GACTTTGGGAGACCAGCTCCAGGTGGCGTCCTCCCT...GCCTAGGAACTGTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR TCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGGCTCTCTGTGGCACTaGGTGCTGTTGTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGEGSLWH*VLLWRP
Trigger: TGGCCTCCACAACAGCACTCAGTGCCACAGAGAGCC...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp CCTTGGCTTCCCTGGATCCCATTGTTGGAGGCACCTTCCCAGCCACAGTTCCTAGGCTCTCTGTGGCACTaGGTGCTGTTGTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PWLPWIPLLEAPSQPQFLGSLWH*VLLWRP
Trigger: TGGCCTCCACAACAGCACTCAGTGCCACAGAGAGCC...TAGGAACTGTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAGCCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR TCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGTTGGGGTGGGTCTTCTaGTGCTCCTCCAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGELGWVF*CSSRAA
Trigger: GGCAGCTCTGGAGGAGCATCAGAAGACCCACCCCAA...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp CCTTGGCTTCCCTGGATCCCATTGTTGGAGGCACCTTCCCAGCCACAGTTCCTAAGAGCCCTGTGGAGGTaGTGGAAGGCGAACAGCCAG +
Preference number: 4 (lower is better)
Translates to: PWLPWIPLLEAPSQPQFLRALWR*WKANSQ
Trigger: CTGGCTGTTCGCCTTCCATCACCTCCACAGGGCTCT...TAGGAACTGTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAGCCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGCTCAAGGCCTCGGGCTaGCCCAAGACACTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: VGSPITGASSVPAPSGAGLKASG*PKTLCC
Trigger: GCAGCACAGTGTCTTGGGGCAGCCCGAGGCCTTGAG...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGCTCAAGGCCTCGGGCTaGCCCAAGACACTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLGHQLLEHLQYRHLLEQLKASG*PKTLCC
Trigger: GCAGCACAGTGTCTTGGGGCAGCCCGAGGCCTTGAG...CTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGTCCACCTGGAGTGGCTaGCTCCTCCTCGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: GLGHQLLEHLQYRHLLEQSTWSG*LLLGLL
Trigger: GAGAAGGCCGAGGAGGAGGCAGCCACTCCAGGTGGA...CTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGCTGGAGCCGTGGCTGTaGCTGCACTGGTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: VGSPITGASSVPAPSGAGLEPWL*LHWWRA
Trigger: TGCTCTCCACCAGTGCAGGCACAGCCACGGCTCCAG...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGTCTTCCGGTGATGGCTaGTGGGACTGCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GLGHQLLEHLQYRHLLEQSSGDG*WDCCWG
Trigger: CCCCCAGCAGCAGTCCCAGCAGCCATCACCGGAAGA...CTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGTCTTCCGGTGATGGCTaGTGGGACTGCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGSSGDG*WDCCWG
Trigger: CCCCCAGCAGCAGTCCCAGCAGCCATCACCGGAAGA...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGCCCAGCTGTGGCTGCTaGCGCCACTGTCCCCACCTC +
Preference number: 4 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLPSCGC*RHCPHL
Trigger: GAGGTGGGGACAGTGGCGGCAGCAGCCACAGCTGGG...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGTGGATCTGCCGCTGCTaGAGCACCCGTAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: WVTNYWSIFSTGTFWSRGWICRC*STRSSS
Trigger: GGAAGAGCTACGGGTGCTGCAGCAGCGGCAGATCCA...CCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp GGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGCTGATCTGTGCTGCCTaGCAAGGCTGGGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: GLGHQLLEHLQYRHLLEQLICAA*QGWGRG
Trigger: GCCCCTTCCCCAGCCTTGCCAGGCAGCACAGATCAG...CTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp CACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAACTGATCTGTGCTGCCTaGCAAGGCTGGGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: HQLLEHLQYRHLLEQGEELICAA*QGWGRG
Trigger: GCCCCTTCCCCAGCCTTGCCAGGCAGCACAGATCAG...TTCCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp CACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAACTCAACCCCTCCACCTaGAGTGGCTGCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: HQLLEHLQYRHLLEQGEELNPST*SGCLLL
Trigger: GAGGAGGAGGCAGCCACTCCAGGTGGAGGGGTTGAG...TTCCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAAAGCAGGGAGTCCTaGAGCCGTGGCTGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGESRES*SRGCAC
Trigger: GCAGGCACAGCCACGGCTCCAGGACTCCCTGCTTTC...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGCCCGGGCAGCTGGACTaGCCTTGTGGCCCACGAAAT +
Preference number: 4 (lower is better)
Translates to: GLGHQLLEHLQYRHLLEQPGQLD*PCGPRN
Trigger: ATTTCGTGGGCCACAAGGCCAGTCCAGCTGCCCGGG...CTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGTCCGGTGATGGCTGCTaGGACTGCTGCTGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGESGDGC*DCCWGK
Trigger: TTTCCCCCAGCAGCAGTCCCAGCAGCCATCACCGGA...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGGAGGCGGGGAGAAGCTaGAGTGAGAAAGCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: VTNYWSIFSTGTFWSRGREAGRS*SEKAGR
Trigger: TCTCCCCGCTTTCTCACTCCAGCTTCTCCCCGCCTC...CCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000611430.4
CDS-3UTR CCA 90 bp GTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGCAGCCGCTGTACCTGTaGCAGCGACCAGGAAATGCC +
Preference number: 4 (lower is better)
Translates to: VTNYWSIFSTGTFWSRGRQPLYL*QRPGNA
Trigger: GGCATTTCCTGGTCGCTGCCACAGGTACAGCGGCTG...CCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp TGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGCAGCCGCTGTACCTGTaGCAGCGACCAGGAAATGCC +
Preference number: 4 (lower is better)
Translates to: WVTNYWSIFSTGTFWSRGQPLYL*QRPGNA
Trigger: GGCATTTCCTGGTCGCTGCCACAGGTACAGCGGCTG...CCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGTAGCTCTGAGGGACTaGCAGGGGCACCCACCGTCT +
Preference number: 4 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGVALRD*QGHPPS
Trigger: AGACGGTGGGTGCCCCTGCCAGTCCCTCAGAGCTAC...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp TGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGGAGGACGCCACCTaGAGCTGGTCTCCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: WVTNYWSIFSTGTFWSRGREDAT*SWSPKV
Trigger: GACTTTGGGAGACCAGCTCCAGGTGGCGTCCTCCCT...CCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAGGGAGGACGCCACCTaGAGCTGGTCTCCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: VTNYWSIFSTGTFWSRGRREDAT*SWSPKV
Trigger: GACTTTGGGAGACCAGCTCCAGGTGGCGTCCTCCCT...CCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp CCTTGGCTTCCCTGGATCCCATTGTTGGAGGCACCTTCCCAGCCACAGTTCCTACGTTCTCAGACGCGCTaGGACCTTCGCAGTCCGAGA +
Preference number: 4 (lower is better)
Translates to: PWLPWIPLLEAPSQPQFLRSQTR*DLRSPR
Trigger: TCTCGGACTGCGAAGGTCCCAGCGCGTCTGAGAACG...TAGGAACTGTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAGCCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614342.1
CDS-3UTR CCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGGGAGAGGGGAGATCTaGGAGGAGCTGATGAGGAGG +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGEGRGEI*EELMRR
Trigger: CCTCCTCATCAGCTCCTCCCAGATCTCCCCTCTCCC...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000611430.4
CDS-3UTR TCA 90 bp CTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTCACTCCACTGATGGCTaGGCCCTCACTCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LPRVGSPITGASSVPAPSHSTDG*ALTPWG
Trigger: CCCCCAGGGAGTGAGGGCTCAGCCATCAGTGGAGTG...AGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGTTTCTGCCACTCCACTaGTGGCTGAGCCCTCACTCC +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGEFLPLH*WLSPHS
Trigger: GGAGTGAGGGCTCAGCCATCAGTGGAGTGGCAGAAA...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp CACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAACTTCCCCTTCTGGGGTaGGTGCTGATGCCGGACTTG +
Preference number: 4 (lower is better)
Translates to: HQLLEHLQYRHLLEQGEELPLLG*VLMPDL
Trigger: CAAGTCCGGCATCAGCACTCACCCCAGAAGGGGAAG...TTCCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGCCCATACCCACCAGCTaGGCAGAAAGGTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: VGSPITGASSVPAPSGAGPIPTS*AERSPQ
Trigger: CTGGGGTGACCTTTCTGCTCAGCTGGTGGGTATGGG...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp TGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGCTCCTCTCGGATTCGTaGGCCATGGTTGTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: WVTNYWSIFSTGTFWSRGLLSDS*AMVVGE
Trigger: TTCCCCCACAACCATGGCGCACGAATCCGAGAGGAG...CCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS-3UTR GCA 90 bp TGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGCCAGCAGAGAAAGGATaGTGTGACCCCAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: WVTNYWSIFSTGTFWSRGPAEKG*CDPSGW
Trigger: CCACCCACTGGGGTCACAGCATCCTTTCTCTGCTGG...CCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGCAATCAGCTGATCTGTaGTGCCTGGCAAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: VTNYWSIFSTGTFWSRGRQSADL*CLARLG
Trigger: CCCCAGCCTTGCCAGGCAGCACAGATCAGCTGATTG...CCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp CACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAAAGCCGTGGCTGTGCCTaGACTGGTGGAGAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: HQLLEHLQYRHLLEQGEESRGCA*TGGEQS
Trigger: ACTCTGCTCTCCACCAGTGCAGGCACAGCCACGGCT...TTCCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGAGCCGTGGCTGTGCCTaGACTGGTGGAGAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: VGSPITGASSVPAPSGAGSRGCA*TGGEQS
Trigger: ACTCTGCTCTCCACCAGTGCAGGCACAGCCACGGCT...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp CTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGGGCAGGAATTCTGTaGCCGGGCAGCTGGACTGGC +
Preference number: 4 (lower is better)
Translates to: LPRVGSPITGASSVPAPSGAGIL*PGSWTG
Trigger: GCCAGTCCAGCTGCCCGGGCACAGAATTCCTGCCCC...AGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGGGGCAGGAATTCTGTaGCCGGGCAGCTGGACTGGC +
Preference number: 4 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLGAGIL*PGSWTG
Trigger: GCCAGTCCAGCTGCCCGGGCACAGAATTCCTGCCCC...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGCTGGGGGAAACTCCGTaGCCCGGAGACTGTAGATTG +
Preference number: 4 (lower is better)
Translates to: VTNYWSIFSTGTFWSRGRLGETP*PGDCRL
Trigger: CAATCTACAGTCTCCGGGGCACGGAGTTTCCCCCAG...CCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp AGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCCCCAGCTGTGGCTGCTaGCGCCACTGTCCCCACCTC +
Preference number: 4 (lower is better)
Translates to: SWRGLGTLTSQNLYLNVTPSCGC*RHCPHL
Trigger: GAGGTGGGGACAGTGGCGGCAGCAGCCACAGCTGGG...GGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp CCTTGGCTTCCCTGGATCCCATTGTTGGAGGCACCTTCCCAGCCACAGTTCCTAAGCTTCTCTCCGGTTTaGCCCCCTCTTCCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: PWLPWIPLLEAPSQPQFLSFSPV*PPLPCL
Trigger: GAGGCAAGGAAGAGGGGGGCAAACCGGAGAGAAGCT...TAGGAACTGTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAGCCAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGCGCAGGCCTTTCTGCTaGTGCTCTCTCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGRRPFC*CSLLAP
Trigger: AGGAGCCAGGAGAGAGCAGCAGCAGAAAGGCCTGCG...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GAGGTCATCATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAAGTCTGCGGCAGCCTCTaGACCCAGCGGCCCAGACTG +
Preference number: 4 (lower is better)
Translates to: EVIMNEKLERSWHTDQPKVCGSL*TQRPRL
Trigger: CAGTCTGGGCCGCTGGGTGCAGAGGCTGCCGCAGAC...TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCATGATGACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000611430.4
CDS-3UTR CCA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGCGGATTCGTGCGCCATaGTTGTGGGGGAAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGRIRAP*LWGKWR
Trigger: CCTCCACTTCCCCCACAACCATGGCGCACGAATCCG...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS-3UTR CCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGAGGCCGAAGAGTTGTTaGGGTTCTCCTGGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGERPKSC*GSPGPQ
Trigger: TTGGGGGCCAGGAGAACCCCAACAACTCTTCGGCCT...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TGGCTTCCCTGGATCCCATTGTTGGAGGCACCTTCCCAGCCACAGTTCCTAGGCGGAGGACCCAGAATCTaGGGGGTTGCTATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: WLPWIPLLEAPSQPQFLGGGPRI*GVAMLC
Trigger: ACAGAGCATAGCAACCCCCCAGATTCTGGGTCCTCC...GCCTAGGAACTGTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCACCCAGGTGGGATCCGTaGGCACGGAGGACCCAGAAT +
Preference number: 4 (lower is better)
Translates to: RVGSPITGASSVPAPSGAPRWDP*ARRTQN
Trigger: ATTCTGGGTCCTCCGTGCCCACGGATCCCACCTGGG...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGTCTCTGGGCCCCAGGTaGGATCCGTGGGCACGGAGG +
Preference number: 4 (lower is better)
Translates to: FSLLPRVGSPITGASSVPSLGPR*DPWARR
Trigger: CCTCCGTGCCCACGGATCCCACCTGGGGCCCAGAGA...CGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGCCCCTCCACCTGGAGTaGCTGCCTCCTCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: FSLLPRVGSPITGASSVPPLHLE*LPPPRP
Trigger: AGGCCGAGGAGGAGGCAGCCACTCCAGGTGGAGGGG...CGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGCACGCAGATTACCCCTaGTGGAGAAGGCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: VTNYWSIFSTGTFWSRGRHADYP*WRRLCH
Trigger: GTGGCAGAGCCTTCTCCACCAGGGGTAATCTGCGTG...CCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp CACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAAGCTGGACTGGCCTTGTaGCCCACGAAATGTGCACGC +
Preference number: 4 (lower is better)
Translates to: HQLLEHLQYRHLLEQGEEAGLAL*PTKCAR
Trigger: GCGTGCACATTTCGTGGGCCACAAGGCCAGTCCAGC...TTCCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGCTGGACTGGCCTTGTaGCCCACGAAATGTGCACGC +
Preference number: 4 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGAGLAL*PTKCAR
Trigger: GCGTGCACATTTCGTGGGCCACAAGGCCAGTCCAGC...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTGGGACAAAGAGCAGCAGGTATGCTGGGACTGCTGCTaGGGGAAACTCCGTGCCCCG +
Preference number: 4 (lower is better)
Translates to: GRSFCEAVSALWDKEQQVCWDCC*GKLRAP
Trigger: CGGGGCACGGAGTTTCCCCCAGCAGCAGTCCCAGCA...TACCTGCTGCTCTTTGTCCCACAGAGCAGAAACAGCTTCACAAAAGGACCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGTGCTGGGACTGCTGCTaGGGGAAACTCCGTGCCCCG +
Preference number: 4 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLCWDCC*GKLRAP
Trigger: CGGGGCACGGAGTTTCCCCCAGCAGCAGTCCCAGCA...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGCTTCCCTGCTCCATTaGCTGAGGCTGATCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGEASLLH*LRLIQA
Trigger: AGCCTGGATCAGCCTCAGCCAATGGAGCAGGGAAGC...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGAGAGCGGCCCCTCCTTaGGGTGGGTCTTCTGATGCT +
Preference number: 4 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGRAAPP*GGSSDA
Trigger: AGCATCAGAAGACCCACCCCAAGGAGGGGCCGCTCT...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCACCAGAGGAGTGGCACTaGGCCCTCCAGAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: RVGSPITGASSVPAPSGAPEEWH*ALQRQL
Trigger: CAGCTGTCTCTGGAGGGCCCAGTGCCACTCCTCTGG...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp GGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGCGTTCTCAGACGCGCTaGGACCTTCGCAGTCCGAGA +
Preference number: 4 (lower is better)
Translates to: GLGHQLLEHLQYRHLLEQRSQTR*DLRSPR
Trigger: TCTCGGACTGCGAAGGTCCCAGCGCGTCTGAGAACG...CTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546363.5
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp GGGGGCCATCCCCTTGTAAGCACAGTAATTTCCAAGCTCAGGGACTACAGAAAACACTCCACTGATGGCTaGGCCCTCACTCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GGHPLVSTVISKLRDYRKHSTDG*ALTPWG
Trigger: CCCCCAGGGAGTGAGGGCTCAGCCATCAGTGGAGTG...TTTTCTGTAGTCCCTGAGCTTGGAAATTACTGTGCTTACAAGGGGATGGCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR TCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGTGCAGAAAACACAAGTaGAGAGCGGCCCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGECRKHK*RAAPPW
Trigger: CCAAGGAGGGGCCGCTCTTCACTTGTGTTTTCTGCA...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGTCAGTCATCTGCATCTaGTGGATCTGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGESVICI*WICRCC
Trigger: GCAGCAGCGGCAGATCCATCAGATGCAGATGACTGA...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp GGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGAGGTGGAAGAAGGCCTaGTTGGGCGTTTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: GLGHQLLEHLQYRHLLEQRWKKA*LGVSAP
Trigger: AGGGGCAGAAACGCCCAAGCAGGCCTTCTTCCACCT...CTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGCCAGCAGAGAAAGGATaGTGTGACCCCAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGPAEKG*CDPSGW
Trigger: CCACCCACTGGGGTCACAGCATCCTTTCTCTGCTGG...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGCAATCAGCTGATCTGTaGTGCCTGGCAAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GLGHQLLEHLQYRHLLEQQSADL*CLARLG
Trigger: CCCCAGCCTTGCCAGGCAGCACAGATCAGCTGATTG...CTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGCCAGTAGTCCCGTGGTaGTTGGGAATGCCAGATGAG +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGEPVVPW*LGMPDE
Trigger: CTCATCTGGCATTCCCAAGCACCACGGGACTACTGG...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGCGATGCCGGTGGAAATaGACTTTGAGGTTGCCACGG +
Preference number: 4 (lower is better)
Translates to: WVTNYWSIFSTGTFWSRGRCRWK*TLRLPR
Trigger: CCGTGGCAACCTCAAAGTGCATTTCCACCGGCATCG...CCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGCTCTGTGGCACTGAGTaGTGTTGTGGAGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: VGSPITGASSVPAPSGAGLCGTE*CCGGHQ
Trigger: CTGGTGGCCTCCACAACAGCACTCAGTGCCACAGAG...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGCTGGAGCCGTGGCTGTaGCTGCACTGGTGGAGAGCA +
Preference number: 4 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLLEPWL*LHWWRA
Trigger: TGCTCTCCACCAGTGCAGGCACAGCCACGGCTCCAG...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp CCTTGGCTTCCCTGGATCCCATTGTTGGAGGCACCTTCCCAGCCACAGTTCCTAGCATGCGAGTTGCCGTaGTACTTTCTGCCACTCCAC +
Preference number: 4 (lower is better)
Translates to: PWLPWIPLLEAPSQPQFLACELP*YFLPLH
Trigger: GTGGAGTGGCAGAAAGTAGCACGGCAACTCGCATGC...TAGGAACTGTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAGCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGAGGTGCATCCGGACATaGTGCTGCAGAGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGERCIRT*CCRVTA
Trigger: TGCTGTCACTCTGCAGCAGCATGTCCGGATGCACCT...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGAGGCCTTTCTGCTGCTaGTCTCTCCTGGCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGERPFCC*SLLAPF
Trigger: GAAAGGAGCCAGGAGAGAGCAGCAGCAGAAAGGCCT...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGCCTTTCTGCTGCTaGTCTCTCCTGGCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: WVTNYWSIFSTGTFWSRGRPFCC*SLLAPF
Trigger: GAAAGGAGCCAGGAGAGAGCAGCAGCAGAAAGGCCT...CCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGTGTGCCAGGAGCATATaGTTCTTGAGGGTAGCCCGC +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGECARSI*FLRVAR
Trigger: GCGGGCTACCCTCAAGAAGCATATGCTCCTGGCACA...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp CCTTGGCTTCCCTGGATCCCATTGTTGGAGGCACCTTCCCAGCCACAGTTCCTATGTGCCAGGAGCATATaGTTCTTGAGGGTAGCCCGC +
Preference number: 4 (lower is better)
Translates to: PWLPWIPLLEAPSQPQFLCARSI*FLRVAR
Trigger: GCGGGCTACCCTCAAGAAGCATATGCTCCTGGCACA...TAGGAACTGTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAGCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp GGAGCTGGTCTCCCAAAGTCTGGGACTCTTAAGAACCAGACAATGACAAAGACAGTCTGCGGCAGCCTCTaGACCCAGCGGCCCAGACTG +
Preference number: 4 (lower is better)
Translates to: GAGLPKSGTLKNQTMTKTVCGSL*TQRPRL
Trigger: CAGTCTGGGCCGCTGGGTGCAGAGGCTGCCGCAGAC...TGTCTTTGTCATTGTCTGGTTCTTAAGAGTCCCAGACTTTGGGAGACCAGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537235.2
CDS-3UTR GCA 90 bp TGGCTTCCCTGGATCCCATTGTTGGAGGCACCTTCCCAGCCACAGTTCCTAGGCCCAAGCAACAGCACCTaGCTGCAGATTTGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: WLPWIPLLEAPSQPQFLGPSNST*LQICSV
Trigger: GACTGAGCAAATCTGCAGGCAGGTGCTGTTGCTTGG...GCCTAGGAACTGTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGCGTGCGCCATGGTTGTaGGGGAAGTGGAGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: FSLLPRVGSPITGASSVPRAPWL*GKWRAR
Trigger: CCTGGCCCTCCACTTCCCCCACAACCATGGCGCACG...CGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS-3UTR CCA 90 bp GGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGAGGCCGAAGAGTTGTTaGGGTTCTCCTGGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: GLGHQLLEHLQYRHLLEQRPKSC*GSPGPQ
Trigger: TTGGGGGCCAGGAGAACCCCAACAACTCTTCGGCCT...CTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGGGAGGACCCAGAATCTaGGGGGTTGCTATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: VTNYWSIFSTGTFWSRGRGGPRI*GVAMLC
Trigger: ACAGAGCATAGCAACCCCCCAGATTCTGGGTCCTCC...CCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCTCTCTGGGCCCCAGGTaGGATCCGTGGGCACGGAGG +
Preference number: 4 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTISLGPR*DPWARR
Trigger: CCTCCGTGCCCACGGATCCCACCTGGGGCCCAGAGA...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp AGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGTCTCTGGGCCCCAGGTaGGATCCGTGGGCACGGAGG +
Preference number: 4 (lower is better)
Translates to: RGLGTLTSQNLYLNVTIRSLGPR*DPWARR
Trigger: CCTCCGTGCCCACGGATCCCACCTGGGGCCCAGAGA...CCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGCGTTTCTGCCCCTGTaGCAGCGACCAGGAAATGCC +
Preference number: 4 (lower is better)
Translates to: RVGSPITGASSVPAPSGAAFLPL*QRPGNA
Trigger: GGCATTTCCTGGTCGCTGCCACAGGGGCAGAAACGC...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450879.2
ENST00000546363.5
CDS-3UTR CCA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGCAGGGGTGGGTTTGTaGCTTCGCCCAACCCCTCCA +
Preference number: 4 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLAGVGL*LRPTPP
Trigger: TGGAGGGGTTGGGCGAAGCCACAAACCCACCCCTGC...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCAGGGAAGGGGCAGGGGTaGGTTTGTGGCTTCGCCCAA +
Preference number: 4 (lower is better)
Translates to: SLLPRVGSPITGASSVPAGKGQG*VCGFAQ
Trigger: TTGGGCGAAGCCACAAACCCACCCCTGCCCCTTCCC...TGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTGGGACAAAGAGCAGCAGGTAGGGAAGGGGCAGGGGTaGGTTTGTGGCTTCGCCCAA +
Preference number: 4 (lower is better)
Translates to: GRSFCEAVSALWDKEQQVGKGQG*VCGFAQ
Trigger: TTGGGCGAAGCCACAAACCCACCCCTGCCCCTTCCC...TACCTGCTGCTCTTTGTCCCACAGAGCAGAAACAGCTTCACAAAAGGACCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGTGTGGGAACGAAGGTaGATCTGCAGGGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGEVWERR*ICRALS
Trigger: TGACAGTGCCCTGCAGATCCACCTTCGTTCCCACAC...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp ATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTGGGACAAAGAGCCCCCTCCACCTGGAGTaGCTGCCTCCTCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: ITLGGPFVKLFLLCGTKSPLHLE*LPPPRP
Trigger: AGGCCGAGGAGGAGGCAGCCACTCCAGGTGGAGGGG...GCTCTTTGTCCCACAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCATGGCTGTGCCTGCACTaGTGGAGAGCAGAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: RVGSPITGASSVPAPSGAWLCLH*WRAESG
Trigger: GCCTGACTCTGCTCTCCACCAGTGCAGGCACAGCCA...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp CTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGAAAGCAGGGAGTCCTaGAGCCGTGGCTGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: LPRVGSPITGASSVPAPSESRES*SRGCAC
Trigger: GCAGGCACAGCCACGGCTCCAGGACTCCCTGCTTTC...AGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GGAGCTGGTCTCCCAAAGTCTGGGACTCTTAAGAACCAGACAATGACAAAGACACAGGGGCAGAGGTGGTaGGGGCTCCTGAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GAGLPKSGTLKNQTMTKTQGQRW*GLLRQL
Trigger: CAGCTGCCTCAGGAGCCCCCACCACCTCTGCCCCTG...TGTCTTTGTCATTGTCTGGTTCTTAAGAGTCCCAGACTTTGGGAGACCAGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCGTGCAGGGGCAGAGGTaGTGGGGGCTCCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTIVQGQR*WGLLRQ
Trigger: CTGCCTCAGGAGCCCCCACCACCTCTGCCCCTGCAC...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp ATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTGTGCAGGGGCAGAGGTaGTGGGGGCTCCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: MNEKLERSWHTDQPKPLPVQGQR*WGLLRQ
Trigger: CTGCCTCAGGAGCCCCCACCACCTCTGCCCCTGCAC...AGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGCTGGACTGGCCTTGTaGCCCACGAAATGTGCACGC +
Preference number: 4 (lower is better)
Translates to: RVGSPITGASSVPAPSGAAGLAL*PTKCAR
Trigger: GCGTGCACATTTCGTGGGCCACAAGGCCAGTCCAGC...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCCGGGCAGCTGGACTaGCCTTGTGGCCCACGAAAT +
Preference number: 4 (lower is better)
Translates to: SLLPRVGSPITGASSVPAPGQLD*PCGPRN
Trigger: ATTTCGTGGGCCACAAGGCCAGTCCAGCTGCCCGGG...TGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGTCTCCTTCCCAGCTGTaGCTGCTGCCGCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLSPSQL*LLPPLS
Trigger: GGACAGTGGCGGCAGCAGCCACAGCTGGGAAGGAGA...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGCTGTCAGGTGGTGGTaGTGGTGGCAAAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGEAVRWW*WWQRRL
Trigger: CAGTCTTCTTTGCCACCACCACCACCACCTGACAGC...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGCAGGCTGTCAGGTGGTaGTGGTGGTGGCAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGEQAVRW*WWWQRR
Trigger: TCTTCTTTGCCACCACCACCACCACCTGACAGCCTG...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGCCTGGATCCCATTGTTaGAGGCACCTTCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: VGSPITGASSVPAPSGAGPGSHC*RHLPSH
Trigger: GTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGG...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGTAGCTCTGAGGGACTaGCAGGGGCACCCACCGTCT +
Preference number: 4 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLVALRD*QGHPPS
Trigger: AGACGGTGGGTGCCCCTGCCAGTCCCTCAGAGCTAC...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp CCTTGGCTTCCCTGGATCCCATTGTTGGAGGCACCTTCCCAGCCACAGTTCCTATCACACCAGGGAAGCTaGAGAGGGTTCCCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: PWLPWIPLLEAPSQPQFLSHQGS*RGFPLR
Trigger: TCTCAAGGGGAACCCTCTCCAGCTTCCCTGGTGTGA...TAGGAACTGTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAGCCAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp TGGCTTCCCTGGATCCCATTGTTGGAGGCACCTTCCCAGCCACAGTTCCTAGGCGCTGCCAGCCCTTTTTaGCTAGGCTGCAATGCCAAA +
Preference number: 4 (lower is better)
Translates to: WLPWIPLLEAPSQPQFLGAASPF*LGCNAK
Trigger: TTTGGCATTGCAGCCTAGCCAAAAAGGGCTGGCAGC...GCCTAGGAACTGTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGTCTCGTCTCCCCCTTaGGTCCGAAGCCAATTGATG +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGEVSSPP*VRSQLM
Trigger: CATCAATTGGCTTCGGACCCAAGGGGGAGACGAGAC...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614342.1
CDS-3UTR TCA 90 bp CTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTTTGGGGTGGGTCTTCTaGTGCTCCTCCAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: LPRVGSPITGASSVPAPSLGWVF*CSSRAA
Trigger: GGCAGCTCTGGAGGAGCATCAGAAGACCCACCCCAA...AGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp TCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCATTGGGGTGGGTCTTCTaGTGCTCCTCCAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SLLPRVGSPITGASSVPALGWVF*CSSRAA
Trigger: GGCAGCTCTGGAGGAGCATCAGAAGACCCACCCCAA...TGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp TCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCAAGAGCCCTGTGGAGGTaGTGGAAGGCGAACAGCCAG +
Preference number: 4 (lower is better)
Translates to: SLLPRVGSPITGASSVPARALWR*WKANSQ
Trigger: CTGGCTGTTCGCCTTCCATCACCTCCACAGGGCTCT...TGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGAGGGTCAGTAGAACATaGGTTCTGGTGGGCGAGGAA +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGERVSRT*VLVGEE
Trigger: TTCCTCGCCCACCAGAACGCATGTTCTACTGACCCT...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR GCA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCACCAGCAGAGAAAGGATaGTGTGACCCCAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: RVGSPITGASSVPAPSGAPAEKG*CDPSGW
Trigger: CCACCCACTGGGGTCACAGCATCCTTTCTCTGCTGG...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGCGTGGTGCTTGGGAATaGCAGATGAGGCGAGGCAAT +
Preference number: 4 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGRGAWE*QMRRGN
Trigger: ATTGCCTCGCCTCATCTGGCATTCCCAAGCACCACG...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCACTCTGTGGCACTGAGTaGTGTTGTGGAGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: RVGSPITGASSVPAPSGALCGTE*CCGGHQ
Trigger: CTGGTGGCCTCCACAACAGCACTCAGTGCCACAGAG...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGCATGCGAGTTGCCGTaGTACTTTCTGCCACTCCAC +
Preference number: 4 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGACELP*YFLPLH
Trigger: GTGGAGTGGCAGAAAGTAGCACGGCAACTCGCATGC...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGTGGCCCACGAAATGTaGACGCAGATTACCCCTGGT +
Preference number: 4 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGVAHEM*TQITPG
Trigger: ACCAGGGGTAATCTGCGTGCACATTTCGTGGGCCAC...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCGGGGCAGGAATTCTGTaGCCGGGCAGCTGGACTGGC +
Preference number: 4 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTIGAGIL*PGSWTG
Trigger: GCCAGTCCAGCTGCCCGGGCACAGAATTCCTGCCCC...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGTGCATCCGGACATGCTaGTGCAGAGTGACAGCATTG +
Preference number: 4 (lower is better)
Translates to: VTNYWSIFSTGTFWSRGRCIRTC*CRVTAL
Trigger: CAATGCTGTCACTCTGCAGCAGCATGTCCGGATGCA...CCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp AGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGCTGCTGGGACTGCTaGTGGGGGAAACTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: RGLGTLTSQNLYLNVTIRGCWDC*WGKLRA
Trigger: GGCACGGAGTTTCCCCCAGCAGCAGTCCCAGCAGCC...CCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCCCCAGCGGCCCAGACTaGGGAGATGGAGATCGGCAG +
Preference number: 4 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTIPSGPD*GDGDRQ
Trigger: CTGCCGATCTCCATCTCCGCAGTCTGGGCCGCTGGG...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000611430.4
CDS-3UTR CCA 90 bp GTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGATTGTGCGCAGCACTTaGCACAGACTTGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: VTNYWSIFSTGTFWSRGRIVRST*HRLGGD
Trigger: ATCACCCCCAAGTCTGTGCCAAGTGCTGCGCACAAT...CCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGGAACATGCGTTCTGGTaGGCGAGGAATTCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: WVTNYWSIFSTGTFWSRGEHAFW*ARNSVG
Trigger: CCCAACTGAATTCCTCGCCCACCAGAACGCATGTTC...CCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GAGGTCATCATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCCAGGTGGGATCCGTaGGCACGGAGGACCCAGAAT +
Preference number: 4 (lower is better)
Translates to: EVIMNEKLERSWHTDQPKPRWDP*ARRTQN
Trigger: ATTCTGGGTCCTCCGTGCCCACGGATCCCACCTGGG...TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCATGATGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTCTCTGGGCCCCAGGTaGGATCCGTGGGCACGGAGG +
Preference number: 4 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQSLGPR*DPWARR
Trigger: CCTCCGTGCCCACGGATCCCACCTGGGGCCCAGAGA...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTATCTCTGGGCCCCAGGTaGGATCCGTGGGCACGGAGG +
Preference number: 4 (lower is better)
Translates to: HFSLLPRVGSPITGASSVSLGPR*DPWARR
Trigger: CCTCCGTGCCCACGGATCCCACCTGGGGCCCAGAGA...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCAGCGTTTCTGCCCCTGTaGCAGCGACCAGGAAATGCC +
Preference number: 4 (lower is better)
Translates to: SLLPRVGSPITGASSVPAAFLPL*QRPGNA
Trigger: GGCATTTCCTGGTCGCTGCCACAGGGGCAGAAACGC...TGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450879.2
ENST00000546363.5
CDS-3UTR CCA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGCTGCCAGTAGTCCCGTaGTGCTTGGGAATGCCAGAT +
Preference number: 4 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGLPVVP*CLGMPD
Trigger: ATCTGGCATTCCCAAGCACCACGGGACTACTGGCAG...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGCTGCCAGTAGTCCCGTaGTGCTTGGGAATGCCAGAT +
Preference number: 4 (lower is better)
Translates to: GLGHQLLEHLQYRHLLEQLPVVP*CLGMPD
Trigger: ATCTGGCATTCCCAAGCACCACGGGACTACTGGCAG...CTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGTGGCTTCAGGAGCCCTaGGGAGGCAGTGGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: FSLLPRVGSPITGASSVPWLQEP*GGSGLK
Trigger: CTTGAGGCCACTGCCTCCCCAGGGCTCCTGAAGCCA...CGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GGGGGCCATCCCCTTGTAAGCACAGTAATTTCCAAGCTCAGGGACTACAGAAAACTCAACCCCTCCACCTaGAGTGGCTGCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GGHPLVSTVISKLRDYRKLNPST*SGCLLL
Trigger: GAGGAGGAGGCAGCCACTCCAGGTGGAGGGGTTGAG...TTTTCTGTAGTCCCTGAGCTTGGAAATTACTGTGCTTACAAGGGGATGGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp GAGGTCATCATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACTCAACCCCTCCACCTaGAGTGGCTGCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: EVIMNEKLERSWHTDQPKLNPST*SGCLLL
Trigger: GAGGAGGAGGCAGCCACTCCAGGTGGAGGGGTTGAG...TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCATGATGACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGATTTACTCAGGGGCAGAGGTGGTaGGGGCTCCTGAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GTLTSQNLYLNVTIRGFTQGQRW*GLLRQL
Trigger: CAGCTGCCTCAGGAGCCCCCACCACCTCTGCCCCTG...AGTAAATCCCCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGGTGCAGGGGCAGAGGTaGTGGGGGCTCCTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQVQGQR*WGLLRQ
Trigger: CTGCCTCAGGAGCCCCCACCACCTCTGCCCCTGCAC...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCATCCGGTGATGGCTGCTaGGACTGCTGCTGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: SLLPRVGSPITGASSVPASGDGC*DCCWGK
Trigger: TTTCCCCCAGCAGCAGTCCCAGCAGCCATCACCGGA...TGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp AGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCTCTCCTTCCCAGCTGTaGCTGCTGCCGCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: SWRGLGTLTSQNLYLNVTSPSQL*LLPPLS
Trigger: GGACAGTGGCGGCAGCAGCCACAGCTGGGAAGGAGA...GGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGCTGTCAGGTGGTGGTaGTGGTGGCAAAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: GLGHQLLEHLQYRHLLEQAVRWW*WWQRRL
Trigger: CAGTCTTCTTTGCCACCACCACCACCACCTGACAGC...CTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGCAGGCTGTCAGGTGGTaGTGGTGGTGGCAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: VGSPITGASSVPAPSGAGQAVRW*WWWQRR
Trigger: TCTTCTTTGCCACCACCACCACCACCTGACAGCCTG...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp CACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAACAGGCTGTCAGGTGGTaGTGGTGGTGGCAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: HQLLEHLQYRHLLEQGEEQAVRW*WWWQRR
Trigger: TCTTCTTTGCCACCACCACCACCACCTGACAGCCTG...TTCCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTGGGACAAAGAGCAGCAGGTAAGAGCGGCCCCTCCTTaGGGTGGGTCTTCTGATGCT +
Preference number: 4 (lower is better)
Translates to: GRSFCEAVSALWDKEQQVRAAPP*GGSSDA
Trigger: AGCATCAGAAGACCCACCCCAAGGAGGGGCCGCTCT...TACCTGCTGCTCTTTGTCCCACAGAGCAGAAACAGCTTCACAAAAGGACCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp CTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTTGGTGGGGCCAGGCTTaGAGTGGTAGTGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: LPRVGSPITGASSVPAPSWWGQA*SGSGGG
Trigger: TCCACCTCCACTACCACTCCAAGCCTGGCCCCACCA...AGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGTCTCCTTGGCTTCCCTaGATCCCATTGTTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: WVTNYWSIFSTGTFWSRGSPWLP*IPLLEA
Trigger: TGCCTCCAACAATGGGATCCAGGGAAGCCAAGGAGA...CCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGGCTGTCTTCTCCTTaGCTTCCCTGGATCCCATTG +
Preference number: 4 (lower is better)
Translates to: VGSPITGASSVPAPSGAGGLSSP*LPWIPL
Trigger: CAATGGGATCCAGGGAAGCCAAGGAGAAGACAGCCC...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGGGGCACCCACCGTCTaGCCTAAGGAGCCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: FSLLPRVGSPITGASSVPGAPTV*PKEPSN
Trigger: GTTGCTTGGCTCCTTAGGCCAGACGGTGGGTGCCCC...CGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp CACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAAGCAAAGGGCTGTACCTaGTGGTGTGCCAGGAGCATA +
Preference number: 4 (lower is better)
Translates to: HQLLEHLQYRHLLEQGEEAKGCT*WCARSI
Trigger: TATGCTCCTGGCACACCACCAGGTACAGCCCTTTGC...TTCCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp GTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGCACATACTGGTTCTGTaGCAGCGACCAGGAAATGCC +
Preference number: 4 (lower is better)
Translates to: VTNYWSIFSTGTFWSRGRHILVL*QRPGNA
Trigger: GGCATTTCCTGGTCGCTGCCACAGAACCAGTATGTG...CCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000611430.4
ENST00000613414.4
CDS-3UTR CCA 90 bp AGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCTCCCGGGTAGAGAGTTaGGAGAGGGAGGGGCAACGC +
Preference number: 4 (lower is better)
Translates to: SWRGLGTLTSQNLYLNVTSRVES*EREGQR
Trigger: GCGTTGCCCCTCCCTCTCCCAACTCTCTACCCGGGA...GGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614342.1
CDS-3UTR TCA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAAATGGATATTGGGATTaGGGGAGGCGATGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: RVGSPITGASSVPAPSGANGYWD*GRRWPL
Trigger: CAGCGGCCATCGCCTCCCTCAATCCCAATATCCATT...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS-3UTR TCA 90 bp CTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGCACAGACTTGGGGGTaGTCCTCCTCGCTAGCATCA +
Preference number: 4 (lower is better)
Translates to: LPRVGSPITGASSVPAPSAQTWG*SSSLAS
Trigger: TGATGCTAGCGAGGAGGATCACCCCCAAGTCTGTGC...AGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp TGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGATTCAGTTGGGTCAGTaGATTGTGCGCAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: WVTNYWSIFSTGTFWSRGIQLGQ*IVRSTW
Trigger: CCAAGTGCTGCGCACAATTCACTGACCCAACTGAAT...CCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGATTCAGTTGGGTCAGTaGATTGTGCGCAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGEIQLGQ*IVRSTW
Trigger: CCAAGTGCTGCGCACAATTCACTGACCCAACTGAAT...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp GAGGTCATCATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAAGGCGAGGCAATCAGCTaGTCTGTGCTGCCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: EVIMNEKLERSWHTDQPKGEAIS*SVLPGK
Trigger: CTTGCCAGGCAGCACAGATCAGCTGATTGCCTCGCC...TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCATGATGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGTTTCTGCCACTCCACTaGTGGCTGAGCCCTCACTCC +
Preference number: 4 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLFLPLH*WLSPHS
Trigger: GGAGTGAGGGCTCAGCCATCAGTGGAGTGGCAGAAA...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp AGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCCTTCCCCTTCTGGGGTaGGTGCTGATGCCGGACTTG +
Preference number: 4 (lower is better)
Translates to: SWRGLGTLTSQNLYLNVTLPLLG*VLMPDL
Trigger: CAAGTCCGGCATCAGCACTCACCCCAGAAGGGGAAG...GGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp CACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAACATGGGCAGGCCATTTaGCAGGAATGCCACATACTG +
Preference number: 4 (lower is better)
Translates to: HQLLEHLQYRHLLEQGEEHGQAI*QECHIL
Trigger: CAGTATGTGGCATTCCTGTCAAATGGCCTGCCCATG...TTCCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGCATGGGCAGGCCATTTaGCAGGAATGCCACATACTG +
Preference number: 4 (lower is better)
Translates to: VGSPITGASSVPAPSGAGHGQAI*QECHIL
Trigger: CAGTATGTGGCATTCCTGTCAAATGGCCTGCCCATG...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGCATGGGCAGGCCATTTaGCAGGAATGCCACATACTG +
Preference number: 4 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGHGQAI*QECHIL
Trigger: CAGTATGTGGCATTCCTGTCAAATGGCCTGCCCATG...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp CACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAAGAGGTCTTGGCACACTaGCCAGCCAAAACCTTTACC +
Preference number: 4 (lower is better)
Translates to: HQLLEHLQYRHLLEQGEEEVLAH*PAKTFT
Trigger: GGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTC...TTCCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp AGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCGGGCGTTTCTGCCCCTaGAGAGGAAGAGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: SWRGLGTLTSQNLYLNVTGRFCP*RGRGGG
Trigger: TCCTCCTCCTCTTCCTCTTCAGGGGCAGAAACGCCC...GGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR TCA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGGGGTCCGAAGCCAATTaGTGCCTCTCCCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVGSEAN*CLSPSA
Trigger: TGCGCTGGGGGAGAGGCATCAATTGGCTTCGGACCC...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614342.1
CDS-3UTR GCA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGAGGGTCAGTAGAACATaGGTTCTGGTGGGCGAGGAA +
Preference number: 4 (lower is better)
Translates to: VGSPITGASSVPAPSGAGRVSRT*VLVGEE
Trigger: TTCCTCGCCCACCAGAACGCATGTTCTACTGACCCT...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR GCA 90 bp CTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTCCAGCAGAGAAAGGATaGTGTGACCCCAGTGGGTGG +
Preference number: 4 (lower is better)
Translates to: LPRVGSPITGASSVPAPSPAEKG*CDPSGW
Trigger: CCACCCACTGGGGTCACAGCATCCTTTCTCTGCTGG...AGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGTCAGCTGATCTGTGCTaGCTGGCAAGGCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLSADLC*LARLGK
Trigger: CTTCCCCAGCCTTGCCAGGCAGCACAGATCAGCTGA...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp CTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTTCAGCTGATCTGTGCTaGCTGGCAAGGCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: LPRVGSPITGASSVPAPSSADLC*LARLGK
Trigger: CTTCCCCAGCCTTGCCAGGCAGCACAGATCAGCTGA...AGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGCTCAAGGCCTCGGGCTaGCCCAAGACACTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVLKASG*PKTLCC
Trigger: GCAGCACAGTGTCTTGGGGCAGCCCGAGGCCTTGAG...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGGCAGGGCACTGTCACTaGCAAATACTTTGGCACAGA +
Preference number: 4 (lower is better)
Translates to: WVTNYWSIFSTGTFWSRGAGHCH*QILWHR
Trigger: TCTGTGCCAAAGTATTTGGCAGTGACAGTGCCCTGC...CCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TCCTGGGAGACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTGAGAGGTCATCCACCTGGAGTGGCTaGCTCCTCCTCGGCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SWETSWQEISLFPNFERSSTWSG*LLLGLL
Trigger: GAGAAGGCCGAGGAGGAGGCAGCCACTCCAGGTGGA...TGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGCTCTGTGGCACTGAGTaGTGTTGTGGAGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLLCGTE*CCGGHQ
Trigger: CTGGTGGCCTCCACAACAGCACTCAGTGCCACAGAG...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp AAAATCAGGGCTCATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGGGCTGCTGGGACTGCTaGTGGGGGAAACTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: KIRAHNSGRSFCEAVSALGCWDC*WGKLRA
Trigger: GGCACGGAGTTTCCCCCAGCAGCAGTCCCAGCAGCC...CAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTATGAGCCCTGATTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGTCTTCCGGTGATGGCTaGTGGGACTGCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVSSGDG*WDCCWG
Trigger: CCCCCAGCAGCAGTCCCAGCAGCCATCACCGGAAGA...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp ATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTCTTCCGGTGATGGCTaGTGGGACTGCTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: MNEKLERSWHTDQPKPLPSSGDG*WDCCWG
Trigger: CCCCCAGCAGCAGTCCCAGCAGCCATCACCGGAAGA...AGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp ATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTGGGACAAAGAGCGGGCTTCTCAGGCACTaGCTTGGGTGCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ITLGGPFVKLFLLCGTKSGLLRH*LGCRRL
Trigger: CAGCCTCCTGCACCCAAGGCAGTGCCTGAGAAGCCC...GCTCTTTGTCCCACAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGGGGCTTCTCAGGCACTaGCTTGGGTGCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVGLLRH*LGCRRL
Trigger: CAGCCTCCTGCACCCAAGGCAGTGCCTGAGAAGCCC...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR GCA 90 bp GGAGCTGGTCTCCCAAAGTCTGGGACTCTTAAGAACCAGACAATGACAAAGACAGGGCTTCTCAGGCACTaGCTTGGGTGCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GAGLPKSGTLKNQTMTKTGLLRH*LGCRRL
Trigger: CAGCCTCCTGCACCCAAGGCAGTGCCTGAGAAGCCC...TGTCTTTGTCATTGTCTGGTTCTTAAGAGTCCCAGACTTTGGGAGACCAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000613414.4
ENST00000614342.1
CDS-3UTR GCA 90 bp TCCTGGGAGACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTGAGAGGTCAGGGCTTCTCAGGCACTaGCTTGGGTGCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SWETSWQEISLFPNFERSGLLRH*LGCRRL
Trigger: CAGCCTCCTGCACCCAAGGCAGTGCCTGAGAAGCCC...TGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR GCA 90 bp ATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTGGGACAAAGAGCTGGAGGAGGAGGGGGTaGAGGGGTCGATTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ITLGGPFVKLFLLCGTKSWRRRG*RGRFWR
Trigger: CCTCCAGAATCGACCCCTGCACCCCCTCCTCCTCCA...GCTCTTTGTCCCACAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp GGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGCCAAGCAACAGCACCTaGCTGCAGATTTGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: GLGHQLLEHLQYRHLLEQPSNST*LQICSV
Trigger: GACTGAGCAAATCTGCAGGCAGGTGCTGTTGCTTGG...CTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGGAGGAGGAGGAAGATaGCAGTGTCTTGCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGGGGGR*QCLAGL
Trigger: CAAACCAGCAAGACACTGGCATCTTCCTCCTCCTCC...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp GTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGTGGGGTGGGAGACAATaGATATTGGGATTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VTNYWSIFSTGTFWSRGRWGGRQ*ILGLRE
Trigger: CTCCCTCAATCCCAATATCCATTGTCTCCCACCCCA...CCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS-3UTR CCA 90 bp TTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGCGGATTCGTGCGCCATaGTTGTGGGGGAAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: FSLLPRVGSPITGASSVPRIRAP*LWGKWR
Trigger: CCTCCACTTCCCCCACAACCATGGCGCACGAATCCG...CGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS-3UTR CCA 90 bp GGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGATTGTGCGCAGCACTTaGCACAGACTTGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: GLGHQLLEHLQYRHLLEQIVRST*HRLGGD
Trigger: ATCACCCCCAAGTCTGTGCCAAGTGCTGCGCACAAT...CTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGATTGTGCGCAGCACTTaGCACAGACTTGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGIVRST*HRLGGD
Trigger: ATCACCCCCAAGTCTGTGCCAAGTGCTGCGCACAAT...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp CACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAAGAACATGCGTTCTGGTaGGCGAGGAATTCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: HQLLEHLQYRHLLEQGEEEHAFW*ARNSVG
Trigger: CCCAACTGAATTCCTCGCCCACCAGAACGCATGTTC...TTCCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAACATGCGTTCTGGTaGGCGAGGAATTCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGEHAFW*ARNSVG
Trigger: CCCAACTGAATTCCTCGCCCACCAGAACGCATGTTC...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GGAGCTGGTCTCCCAAAGTCTGGGACTCTTAAGAACCAGACAATGACAAAGACACCCAGGTGGGATCCGTaGGCACGGAGGACCCAGAAT +
Preference number: 4 (lower is better)
Translates to: GAGLPKSGTLKNQTMTKTPRWDP*ARRTQN
Trigger: ATTCTGGGTCCTCCGTGCCCACGGATCCCACCTGGG...TGTCTTTGTCATTGTCTGGTTCTTAAGAGTCCCAGACTTTGGGAGACCAGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp ATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTGGGACAAAGAGCGGGAAGGGGCAGGGGTaGGTTTGTGGCTTCGCCCAA +
Preference number: 4 (lower is better)
Translates to: ITLGGPFVKLFLLCGTKSGKGQG*VCGFAQ
Trigger: TTGGGCGAAGCCACAAACCCACCCCTGCCCCTTCCC...GCTCTTTGTCCCACAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp AGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGCTGATCTGTGCTGCCTaGCAAGGCTGGGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: RGLGTLTSQNLYLNVTIRLICAA*QGWGRG
Trigger: GCCCCTTCCCCAGCCTTGCCAGGCAGCACAGATCAG...CCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp CCCCTTGTAAGCACAGTAATTTCCAAGCTCAGGGACTACAGAAAAGCCACTAGGTGGCTTCAGGAGCCCTaGGGAGGCAGTGGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: PLVSTVISKLRDYRKATRWLQEP*GGSGLK
Trigger: CTTGAGGCCACTGCCTCCCCAGGGCTCCTGAAGCCA...CCTAGTGGCTTTTCTGTAGTCCCTGAGCTTGGAAATTACTGTGCTTACAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGCTCTGGTACTGGGTGTaGGTTCATCTGCACATGTGG +
Preference number: 4 (lower is better)
Translates to: VGSPITGASSVPAPSGAGLWYWV*VHLHMW
Trigger: CCACATGTGCAGATGAACCCACACCCAGTACCAGAG...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp AGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGCCCGGGCAGCTGGACTaGCCTTGTGGCCCACGAAAT +
Preference number: 4 (lower is better)
Translates to: RGLGTLTSQNLYLNVTIRPGQLD*PCGPRN
Trigger: ATTTCGTGGGCCACAAGGCCAGTCCAGCTGCCCGGG...CCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTGCTGGGACTGCTGCTaGGGGAAACTCCGTGCCCCG +
Preference number: 4 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQCWDCC*GKLRAP
Trigger: CGGGGCACGGAGTTTCCCCCAGCAGCAGTCCCAGCA...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp AGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCTCCGGTGATGGCTGCTaGGACTGCTGCTGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: SWRGLGTLTSQNLYLNVTSGDGC*DCCWGK
Trigger: TTTCCCCCAGCAGCAGTCCCAGCAGCCATCACCGGA...GGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp AGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGTCTCCTTCCCAGCTGTaGCTGCTGCCGCCACTGTCC +
Preference number: 4 (lower is better)
Translates to: RGLGTLTSQNLYLNVTIRSPSQL*LLPPLS
Trigger: GGACAGTGGCGGCAGCAGCCACAGCTGGGAAGGAGA...CCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp CACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAAGTCAGGTGGTGGTGGTaGTGGCAAAGAAGACTGTTG +
Preference number: 4 (lower is better)
Translates to: HQLLEHLQYRHLLEQGEEVRWWW*WQRRLL
Trigger: CAACAGTCTTCTTTGCCACCACCACCACCACCTGAC...TTCCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGCTGTCAGGTGGTGGTaGTGGTGGCAAAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: RVGSPITGASSVPAPSGAAVRWW*WWQRRL
Trigger: CAGTCTTCTTTGCCACCACCACCACCACCTGACAGC...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTGGGACAAAGAGCAGCAGGTAGCTTCCCTGCTCCATTaGCTGAGGCTGATCCAGGCT +
Preference number: 4 (lower is better)
Translates to: GRSFCEAVSALWDKEQQVASLLH*LRLIQA
Trigger: AGCCTGGATCAGCCTCAGCCAATGGAGCAGGGAAGC...TACCTGCTGCTCTTTGTCCCACAGAGCAGAAACAGCTTCACAAAAGGACCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp CACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAAGCCACATACTGGTTCTaGTGGTGTGCCAGGAGCATA +
Preference number: 4 (lower is better)
Translates to: HQLLEHLQYRHLLEQGEEATYWF*WCARSI
Trigger: TATGCTCCTGGCACACCACCAGAACCAGTATGTGGC...TTCCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000450879.2
ENST00000546363.5
CDS-3UTR CCA 90 bp GTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAATTCCAGGGCTTCATaGGCAGGCCATTTGACAGGA +
Preference number: 4 (lower is better)
Translates to: VTNYWSIFSTGTFWSRGRNSRAS*AGHLTG
Trigger: TCCTGTCAAATGGCCTGCCCATGAAGCCCTGGAATT...CCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp AGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCTGGTGGGGCCAGGCTTaGAGTGGTAGTGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SWRGLGTLTSQNLYLNVTWWGQA*SGSGGG
Trigger: TCCACCTCCACTACCACTCCAAGCCTGGCCCCACCA...GGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GGGGGCCATCCCCTTGTAAGCACAGTAATTTCCAAGCTCAGGGACTACAGAAAATGGTGGGGCCAGGCTTaGAGTGGTAGTGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: GGHPLVSTVISKLRDYRKWWGQA*SGSGGG
Trigger: TCCACCTCCACTACCACTCCAAGCCTGGCCCCACCA...TTTTCTGTAGTCCCTGAGCTTGGAAATTACTGTGCTTACAAGGGGATGGCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCCAAACAGCACTGGTaGGGCCAGGCTTGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: FSLLPRVGSPITGASSVPAKQHW*GQAWSG
Trigger: ACCACTCCAAGCCTGGCCCCACCAGTGCTGTTTGGC...CGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GAGGTCATCATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAAGCCAAACAGCACTGGTaGGGCCAGGCTTGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: EVIMNEKLERSWHTDQPKAKQHW*GQAWSG
Trigger: ACCACTCCAAGCCTGGCCCCACCAGTGCTGTTTGGC...TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCATGATGACCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGTCTCCTTGGCTTCCCTaGATCCCATTGTTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGSPWLP*IPLLEA
Trigger: TGCCTCCAACAATGGGATCCAGGGAAGCCAAGGAGA...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAAGCTGGAGAGGTCTTaGCACACTGACCAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: VTNYWSIFSTGTFWSRGRKLERS*HTDQPK
Trigger: TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTT...CCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp CCTTGGCTTCCCTGGATCCCATTGTTGGAGGCACCTTCCCAGCCACAGTTCCTAAAGCTGGAGAGGTCTTaGCACACTGACCAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: PWLPWIPLLEAPSQPQFLKLERS*HTDQPK
Trigger: TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTT...TAGGAACTGTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAGCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCGGGGCACCCACCGTCTaGCCTAAGGAGCCAAGCAAC +
Preference number: 4 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTIGAPTV*PKEPSN
Trigger: GTTGCTTGGCTCCTTAGGCCAGACGGTGGGTGCCCC...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGCAAAGGGCTGTACCTaGTGGTGTGCCAGGAGCATA +
Preference number: 4 (lower is better)
Translates to: RVGSPITGASSVPAPSGAAKGCT*WCARSI
Trigger: TATGCTCCTGGCACACCACCAGGTACAGCCCTTTGC...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp AGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCGACGCCACCTGGAGCTaGTCTCCCAAAGTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SWRGLGTLTSQNLYLNVTDATWS*SPKVWD
Trigger: GTCCCAGACTTTGGGAGACCAGCTCCAGGTGGCGTC...GGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGATTCAGTTGGGTCAGTaGATTGTGCGCAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: VGSPITGASSVPAPSGAGIQLGQ*IVRSTW
Trigger: CCAAGTGCTGCGCACAATTCACTGACCCAACTGAAT...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCGGCGAGGCAATCAGCTaGTCTGTGCTGCCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTIGEAIS*SVLPGK
Trigger: CTTGCCAGGCAGCACAGATCAGCTGATTGCCTCGCC...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp TCCTGGGAGACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTGAGAGGTCAGGCGAGGCAATCAGCTaGTCTGTGCTGCCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: SWETSWQEISLFPNFERSGEAIS*SVLPGK
Trigger: CTTGCCAGGCAGCACAGATCAGCTGATTGCCTCGCC...TGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGGGCTCTCTGTGGCACTaGGTGCTGTTGTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVGSLWH*VLLWRP
Trigger: TGGCCTCCACAACAGCACTCAGTGCCACAGAGAGCC...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp GAGGTCATCATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAATTTCTGCCACTCCACTaGTGGCTGAGCCCTCACTCC +
Preference number: 4 (lower is better)
Translates to: EVIMNEKLERSWHTDQPKFLPLH*WLSPHS
Trigger: GGAGTGAGGGCTCAGCCATCAGTGGAGTGGCAGAAA...TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCATGATGACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGCTTCCCCTTCTGGGGTaGGTGCTGATGCCGGACTTG +
Preference number: 4 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVLPLLG*VLMPDL
Trigger: CAAGTCCGGCATCAGCACTCACCCCAGAAGGGGAAG...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp ATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTCTTCCCCTTCTGGGGTaGGTGCTGATGCCGGACTTG +
Preference number: 4 (lower is better)
Translates to: MNEKLERSWHTDQPKPLPLPLLG*VLMPDL
Trigger: CAAGTCCGGCATCAGCACTCACCCCAGAAGGGGAAG...AGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCGGGCGTTTCTGCCCCTaGAGAGGAAGAGGAGGAGGA +
Preference number: 4 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTIGRFCP*RGRGGG
Trigger: TCCTCCTCCTCTTCCTCTTCAGGGGCAGAAACGCCC...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR TCA 90 bp ATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTCCCATACCCACCAGCTaGGCAGAAAGGTCACCCCAG +
Preference number: 4 (lower is better)
Translates to: MNEKLERSWHTDQPKPLPPIPTS*AERSPQ
Trigger: CTGGGGTGACCTTTCTGCTCAGCTGGTGGGTATGGG...AGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp TTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGCTCCTCTCGGATTCGTaGGCCATGGTTGTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: FSLLPRVGSPITGASSVPLLSDS*AMVVGE
Trigger: TTCCCCCACAACCATGGCGCACGAATCCGAGAGGAG...CGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS-3UTR GCA 90 bp TCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCAGCAGCGACCAGGAAATaGCCTGAAGACTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SLLPRVGSPITGASSVPAAATRK*PEDSSP
Trigger: AGGAGAGGAGTCTTCAGGGCATTTCCTGGTCGCTGC...TGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR GCA 90 bp TTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGAGGTGGAAGAAGGCCTaGTTGGGCGTTTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: FSLLPRVGSPITGASSVPRWKKA*LGVSAP
Trigger: AGGGGCAGAAACGCCCAAGCAGGCCTTCTTCCACCT...CGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGCCAGTAGTCCCGTGGTaGTTGGGAATGCCAGATGAG +
Preference number: 4 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLPVVPW*LGMPDE
Trigger: CTCATCTGGCATTCCCAAGCACCACGGGACTACTGG...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp AAAATCAGGGCTCATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGCTCAAGGCCTCGGGCTaGCCCAAGACACTGTGCTGC +
Preference number: 4 (lower is better)
Translates to: KIRAHNSGRSFCEAVSALLKASG*PKTLCC
Trigger: GCAGCACAGTGTCTTGGGGCAGCCCGAGGCCTTGAG...CAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTATGAGCCCTGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp GGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGCAGGGCACTGTCACTaGCAAATACTTTGGCACAGA +
Preference number: 4 (lower is better)
Translates to: GLGHQLLEHLQYRHLLEQAGHCH*QILWHR
Trigger: TCTGTGCCAAAGTATTTGGCAGTGACAGTGCCCTGC...CTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp CCCCTTGTAAGCACAGTAATTTCCAAGCTCAGGGACTACAGAAAAGCCACTAGGAGCCGTGGCTGTGCCTaGACTGGTGGAGAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: PLVSTVISKLRDYRKATRSRGCA*TGGEQS
Trigger: ACTCTGCTCTCCACCAGTGCAGGCACAGCCACGGCT...CCTAGTGGCTTTTCTGTAGTCCCTGAGCTTGGAAATTACTGTGCTTACAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp AGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGAGCCGTGGCTGTGCCTaGACTGGTGGAGAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: RGLGTLTSQNLYLNVTIRSRGCA*TGGEQS
Trigger: ACTCTGCTCTCCACCAGTGCAGGCACAGCCACGGCT...CCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGCTGGGGGAAACTCCGTaGCCCGGAGACTGTAGATTG +
Preference number: 4 (lower is better)
Translates to: FSLLPRVGSPITGASSVPLGETP*PGDCRL
Trigger: CAATCTACAGTCTCCGGGGCACGGAGTTTCCCCCAG...CGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp AGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCCTGGGGGAAACTCCGTaGCCCGGAGACTGTAGATTG +
Preference number: 4 (lower is better)
Translates to: SWRGLGTLTSQNLYLNVTLGETP*PGDCRL
Trigger: CAATCTACAGTCTCCGGGGCACGGAGTTTCCCCCAG...GGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TCCTGGGAGACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTGAGAGGTCACGCAGGCCTTTCTGCTaGTGCTCTCTCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: SWETSWQEISLFPNFERSRRPFC*CSLLAP
Trigger: AGGAGCCAGGAGAGAGCAGCAGCAGAAAGGCCTGCG...TGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp AGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGCGCAGGCCTTTCTGCTaGTGCTCTCTCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RGLGTLTSQNLYLNVTIRRRPFC*CSLLAP
Trigger: AGGAGCCAGGAGAGAGCAGCAGCAGAAAGGCCTGCG...CCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGCGCTCAAGAAAGCCCTaGCTGCAGAAAACACAAGTG +
Preference number: 4 (lower is better)
Translates to: VGSPITGASSVPAPSGAGRSRKP*LQKTQV
Trigger: CACTTGTGTTTTCTGCAGGCAGGGCTTTCTTGAGCG...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTAGGGCTTCTCAGGCACTaGCTTGGGTGCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: HFSLLPRVGSPITGASSVGLLRH*LGCRRL
Trigger: CAGCCTCCTGCACCCAAGGCAGTGCCTGAGAAGCCC...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR GCA 90 bp TCCTGGGAGACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTGAGAGGTCATATTCAAGTGGCCACTaGCTACCCCTGGGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: SWETSWQEISLFPNFERSYSSGH*LPLGAE
Trigger: CTCCGCCCCCAGGGGTAGGCAGTGGCCACTTGAATA...TGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp ATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTGGGACAAAGAGCTGGATCTGCCGCTGCTaGAGCACCCGTAGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ITLGGPFVKLFLLCGTKSWICRC*STRSSS
Trigger: GGAAGAGCTACGGGTGCTGCAGCAGCGGCAGATCCA...GCTCTTTGTCCCACAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGTGGGGTGGGAGACAATaGATATTGGGATTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: VGSPITGASSVPAPSGAGWGGRQ*ILGLRE
Trigger: CTCCCTCAATCCCAATATCCATTGTCTCCCACCCCA...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS-3UTR CCA 90 bp TCCTGGGAGACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTGAGAGGTCACGGATTCGTGCGCCATaGTTGTGGGGGAAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SWETSWQEISLFPNFERSRIRAP*LWGKWR
Trigger: CCTCCACTTCCCCCACAACCATGGCGCACGAATCCG...TGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS-3UTR CCA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGGCGAGGAATTCAGTTaGGTCAGTGAATTGTGCGCA +
Preference number: 4 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGGEEFS*VSELCA
Trigger: TGCGCACAATTCACTGACCCAACTGAATTCCTCGCC...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp CACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAAGGCGAGGAATTCAGTTaGGTCAGTGAATTGTGCGCA +
Preference number: 4 (lower is better)
Translates to: HQLLEHLQYRHLLEQGEEGEEFS*VSELCA
Trigger: TGCGCACAATTCACTGACCCAACTGAATTCCTCGCC...TTCCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGAACATGCGTTCTGGTaGGCGAGGAATTCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: RVGSPITGASSVPAPSGAEHAFW*ARNSVG
Trigger: CCCAACTGAATTCCTCGCCCACCAGAACGCATGTTC...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGATTTACTGCAGGGGTGGGTTTGTaGCTTCGCCCAACCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GTLTSQNLYLNVTIRGFTAGVGL*LRPTPP
Trigger: TGGAGGGGTTGGGCGAAGCCACAAACCCACCCCTGC...AGTAAATCCCCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTAGCAGGGGTGGGTTTGTaGCTTCGCCCAACCCCTCCA +
Preference number: 4 (lower is better)
Translates to: HFSLLPRVGSPITGASSVAGVGL*LRPTPP
Trigger: TGGAGGGGTTGGGCGAAGCCACAAACCCACCCCTGC...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGGGGAAGGGGCAGGGGTaGGTTTGTGGCTTCGCCCAA +
Preference number: 4 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQGKGQG*VCGFAQ
Trigger: TTGGGCGAAGCCACAAACCCACCCCTGCCCCTTCCC...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACTGCCAGTAGTCCCGTaGTGCTTGGGAATGCCAGAT +
Preference number: 4 (lower is better)
Translates to: SLLPRVGSPITGASSVPALPVVP*CLGMPD
Trigger: ATCTGGCATTCCCAAGCACCACGGGACTACTGGCAG...TGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTGGGACAAAGAGCAGCAGGTAGTGTGGGAACGAAGGTaGATCTGCAGGGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: GRSFCEAVSALWDKEQQVVWERR*ICRALS
Trigger: TGACAGTGCCCTGCAGATCCACCTTCGTTCCCACAC...TACCTGCTGCTCTTTGTCCCACAGAGCAGAAACAGCTTCACAAAAGGACCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp TGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGTTCTCACGATGCCGGTaGAAATGCACTTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: WVTNYWSIFSTGTFWSRGFSRCR*KCTLRL
Trigger: CAACCTCAAAGTGCATTTCCACCGGCATCGTGAGAA...CCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACTCGGCCTTCTCTGGTaGCACGGACATACCATAAGG +
Preference number: 4 (lower is better)
Translates to: SLLPRVGSPITGASSVPALGLLW*HGHTIR
Trigger: CCTTATGGTATGTCCGTGCCACCAGAGAAGGCCGAG...TGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGCTCGGCCTTCTCTGGTaGCACGGACATACCATAAGG +
Preference number: 4 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLLGLLW*HGHTIR
Trigger: CCTTATGGTATGTCCGTGCCACCAGAGAAGGCCGAG...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACTCAACCCCTCCACCTaGAGTGGCTGCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: HFSLLPRVGSPITGASSVLNPST*SGCLLL
Trigger: GAGGAGGAGGCAGCCACTCCAGGTGGAGGGGTTGAG...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGTGGCTGTGCCTGCACTaGTGGAGAGCAGAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVWLCLH*WRAESG
Trigger: GCCTGACTCTGCTCTCCACCAGTGCAGGCACAGCCA...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp CCCCTTGTAAGCACAGTAATTTCCAAGCTCAGGGACTACAGAAAAGCCACTAGGTGGCTGTGCCTGCACTaGTGGAGAGCAGAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: PLVSTVISKLRDYRKATRWLCLH*WRAESG
Trigger: GCCTGACTCTGCTCTCCACCAGTGCAGGCACAGCCA...CCTAGTGGCTTTTCTGTAGTCCCTGAGCTTGGAAATTACTGTGCTTACAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp TGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGACAGATGACACACTaGTTAGGTCCAGAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: WVTNYWSIFSTGTFWSRGRQMTH*LGPEEA
Trigger: AGCCTCTTCTGGACCTAACCAGTGTGTCATCTGTCT...CCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp ATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTGCTGGACTGGCCTTGTaGCCCACGAAATGTGCACGC +
Preference number: 4 (lower is better)
Translates to: MNEKLERSWHTDQPKPLPAGLAL*PTKCAR
Trigger: GCGTGCACATTTCGTGGGCCACAAGGCCAGTCCAGC...AGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCCGGGCAGCTGGACTaGCCTTGTGGCCCACGAAAT +
Preference number: 4 (lower is better)
Translates to: HFSLLPRVGSPITGASSVPGQLD*PCGPRN
Trigger: ATTTCGTGGGCCACAAGGCCAGTCCAGCTGCCCGGG...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCTCCGGTGATGGCTGCTaGGACTGCTGCTGGGGGAAA +
Preference number: 4 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTISGDGC*DCCWGK
Trigger: TTTCCCCCAGCAGCAGTCCCAGCAGCCATCACCGGA...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAAGGAATGCCACATACTaGTTCTGGTGGTGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RVGSPITGASSVPAPSGARNATY*FWWCAR
Trigger: CCTGGCACACCACCAGAACCAGTATGTGGCATTCCT...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450879.2
ENST00000546363.5
CDS-3UTR CCA 90 bp GGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGAATTCCAGGGCTTCATaGGCAGGCCATTTGACAGGA +
Preference number: 4 (lower is better)
Translates to: GLGHQLLEHLQYRHLLEQNSRAS*AGHLTG
Trigger: TCCTGTCAAATGGCCTGCCCATGAAGCCCTGGAATT...CTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGTGGTGGGGCCAGGCTTaGAGTGGTAGTGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVWWGQA*SGSGGG
Trigger: TCCACCTCCACTACCACTCCAAGCCTGGCCCCACCA...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp ATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTGGGACAAAGAGCTGGTGGGGCCAGGCTTaGAGTGGTAGTGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: ITLGGPFVKLFLLCGTKSWWGQA*SGSGGG
Trigger: TCCACCTCCACTACCACTCCAAGCCTGGCCCCACCA...GCTCTTTGTCCCACAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCGCCAAACAGCACTGGTaGGGCCAGGCTTGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTIAKQHW*GQAWSG
Trigger: ACCACTCCAAGCCTGGCCCCACCAGTGCTGTTTGGC...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp AGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCCCTGGATCCCATTGTTaGAGGCACCTTCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: SWRGLGTLTSQNLYLNVTPGSHC*RHLPSH
Trigger: GTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGG...GGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGGGCTGTCTTCTCCTTaGCTTCCCTGGATCCCATTG +
Preference number: 4 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLGLSSP*LPWIPL
Trigger: CAATGGGATCCAGGGAAGCCAAGGAGAAGACAGCCC...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGTGGGTCACCAATTACTaGAGCATCTTCAGTACCGGC +
Preference number: 4 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGWVTNY*SIFSTG
Trigger: GCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGAAGCTGGAGAGGTCTTaGCACACTGACCAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: VGSPITGASSVPAPSGAGKLERS*HTDQPK
Trigger: TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTT...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp ATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTGGGTTGCTCCCAGCTTaGGACTGGCCAAGATCAGGC +
Preference number: 4 (lower is better)
Translates to: MNEKLERSWHTDQPKPLPGLLPA*DWPRSG
Trigger: GCCTGATCTTGGCCAGTCCCAAGCTGGGAGCAACCC...AGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp GAGGTCATCATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAAAGGGGGATATTCAAGTaGCCACTGCCTACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: EVIMNEKLERSWHTDQPKRGIFK*PLPTPG
Trigger: CCCAGGGGTAGGCAGTGGCCACTTGAATATCCCCCT...TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCATGATGACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCAGAGGAGTGGCACTaGGCCCTCCAGAGACAGCTG +
Preference number: 4 (lower is better)
Translates to: HFSLLPRVGSPITGASSVPEEWH*ALQRQL
Trigger: CAGCTGTCTCTGGAGGGCCCAGTGCCACTCCTCTGG...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGATCCCCCATGATCCCTaGTACACCTCTGCACACTAT +
Preference number: 4 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGIPHDP*YTSAHY
Trigger: ATAGTGTGCAGAGGTGTACCAGGGATCATGGGGGAT...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp CACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAAATCCCCCATGATCCCTaGTACACCTCTGCACACTAT +
Preference number: 4 (lower is better)
Translates to: HQLLEHLQYRHLLEQGEEIPHDP*YTSAHY
Trigger: ATAGTGTGCAGAGGTGTACCAGGGATCATGGGGGAT...TTCCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TCCTGGGAGACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTGAGAGGTCAGACGCCACCTGGAGCTaGTCTCCCAAAGTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SWETSWQEISLFPNFERSDATWS*SPKVWD
Trigger: GTCCCAGACTTTGGGAGACCAGCTCCAGGTGGCGTC...TGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp ATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTTAACCGGGGTGACCTaGTCTCGTCTCCCCCTTGGG +
Preference number: 4 (lower is better)
Translates to: MNEKLERSWHTDQPKPLPLTGVT*SRLPLG
Trigger: CCCAAGGGGGAGACGAGACCAGGTCACCCCGGTTAA...AGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000614342.1
CDS-3UTR TCA 90 bp TCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCAAGAGAAAGGATGCTGTaGCCCCAGTGGGTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: SLLPRVGSPITGASSVPARERML*PQWVVK
Trigger: CTTTACCACCCACTGGGGTCACAGCATCCTTTCTCT...TGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGGGCGAGGCAATCAGCTaGTCTGTGCTGCCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQGEAIS*SVLPGK
Trigger: CTTGCCAGGCAGCACAGATCAGCTGATTGCCTCGCC...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGTTTCTGCCACTCCACTaGTGGCTGAGCCCTCACTCC +
Preference number: 4 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVFLPLH*WLSPHS
Trigger: GGAGTGAGGGCTCAGCCATCAGTGGAGTGGCAGAAA...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp AAAATCAGGGCTCATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTTGGGGTGGGTCTTCTaGTGCTCCTCCAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: KIRAHNSGRSFCEAVSALLGWVF*CSSRAA
Trigger: GGCAGCTCTGGAGGAGCATCAGAAGACCCACCCCAA...CAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTATGAGCCCTGATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR TCA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGCTACTTCTTGTCTATaGTGGGCTTCTCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: RVGSPITGASSVPAPSGAATSCL*WASQAL
Trigger: CAGTGCCTGAGAAGCCCATCATAGACAAGAAGTAGC...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGGTCTTGGCACACTaGCCAGCCAAAACCTTTACC +
Preference number: 4 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLEVLAH*PAKTFT
Trigger: GGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTC...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp GGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGAGAGGTCATCATGAATaGGAAGCTGGAGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: GLGHQLLEHLQYRHLLEQRGHHE*EAGEVL
Trigger: CAAGACCTCTCCAGCTTCTCATTCATGATGACCTCT...CTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGAGAGGTCATCATGAATaGGAAGCTGGAGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: VGSPITGASSVPAPSGAGRGHHE*EAGEVL
Trigger: CAAGACCTCTCCAGCTTCTCATTCATGATGACCTCT...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp TCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCAGGAGAGGGTTCCCCTTaGGAAAGCTGCAGAGAATCT +
Preference number: 4 (lower is better)
Translates to: SLLPRVGSPITGASSVPAGEGSP*ESCRES
Trigger: AGATTCTCTGCAGCTTTCTCAAGGGGAACCCTCTCC...TGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCCTCCTCTCGGATTCGTaGGCCATGGTTGTGGGGGAA +
Preference number: 4 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTILLSDS*AMVVGE
Trigger: TTCCCCCACAACCATGGCGCACGAATCCGAGAGGAG...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS-3UTR GCA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGTGGAAGAAGGCCTaGTTGGGCGTTTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTIRWKKA*LGVSAP
Trigger: AGGGGCAGAAACGCCCAAGCAGGCCTTCTTCCACCT...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp AGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGAGGTGGAAGAAGGCCTaGTTGGGCGTTTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: RGLGTLTSQNLYLNVTIRRWKKA*LGVSAP
Trigger: AGGGGCAGAAACGCCCAAGCAGGCCTTCTTCCACCT...CCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TCCTGGGAGACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTGAGAGGTCATCAGCTGATCTGTGCTaGCTGGCAAGGCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: SWETSWQEISLFPNFERSSADLC*LARLGK
Trigger: CTTCCCCAGCCTTGCCAGGCAGCACAGATCAGCTGA...TGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GAGGTCATCATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACGTGGTGCTTGGGAATaGCAGATGAGGCGAGGCAAT +
Preference number: 4 (lower is better)
Translates to: EVIMNEKLERSWHTDQPKRGAWE*QMRRGN
Trigger: ATTGCCTCGCCTCATCTGGCATTCCCAAGCACCACG...TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCATGATGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GAGGTCATCATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCAGTAGTCCCGTGGTaGTTGGGAATGCCAGATGAG +
Preference number: 4 (lower is better)
Translates to: EVIMNEKLERSWHTDQPKPVVPW*LGMPDE
Trigger: CTCATCTGGCATTCCCAAGCACCACGGGACTACTGG...TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCATGATGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GAGGTCATCATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACAGAAGCGGCATTTGTaGCTTCCACCAGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: EVIMNEKLERSWHTDQPKQKRHL*LPPGFS
Trigger: GGAGAAGCCTGGTGGAAGGCACAAATGCCGCTTCTG...TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCATGATGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCCTCTGTGGCACTGAGTaGTGTTGTGGAGGCCACCAG +
Preference number: 4 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTILCGTE*CCGGHQ
Trigger: CTGGTGGCCTCCACAACAGCACTCAGTGCCACAGAG...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TGGCTTCCCTGGATCCCATTGTTGGAGGCACCTTCCCAGCCACAGTTCCTAGGCACTTACTTAGTTGCATaGGAGTTGCCGTGCTACTTT +
Preference number: 4 (lower is better)
Translates to: WLPWIPLLEAPSQPQFLGTYLVA*ELPCYF
Trigger: AAAGTAGCACGGCAACTCGCATGCAACTAAGTAAGT...GCCTAGGAACTGTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp TGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGACCAACTTACTTAGTTaGATGCGAGTTGCCGTGCTA +
Preference number: 4 (lower is better)
Translates to: WVTNYWSIFSTGTFWSRGTNLLS*MRVAVL
Trigger: TAGCACGGCAACTCGCATGCAACTAAGTAAGTTGGT...CCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCAATCCGGACATGCTGCTaGAGAGTGACAGCATTGGTG +
Preference number: 4 (lower is better)
Translates to: SLLPRVGSPITGASSVPAIRTCC*RVTALV
Trigger: CACCAATGCTGTCACTCTGCAGCAGCATGTCCGGAT...TGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp AGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCTCCACCTTCAGGGAGTaGAGTACCACCGTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: SWRGLGTLTSQNLYLNVTSTFRE*STTVGD
Trigger: ATCCCCAACGGTGGTACTGCACTCCCTGAAGGTGGA...GGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp ATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTAGCTTCTCTCCGGTTTaGCCCCCTCTTCCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: MNEKLERSWHTDQPKPLPSFSPV*PPLPCL
Trigger: GAGGCAAGGAAGAGGGGGGCAAACCGGAGAGAAGCT...AGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GGGGGCCATCCCCTTGTAAGCACAGTAATTTCCAAGCTCAGGGACTACAGAAAATGTGCCAGGAGCATATaGTTCTTGAGGGTAGCCCGC +
Preference number: 4 (lower is better)
Translates to: GGHPLVSTVISKLRDYRKCARSI*FLRVAR
Trigger: GCGGGCTACCCTCAAGAAGCATATGCTCCTGGCACA...TTTTCTGTAGTCCCTGAGCTTGGAAATTACTGTGCTTACAAGGGGATGGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp CACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAAGTAGAACATGCGTTCTaGTGGGCGAGGAATTCAGTT +
Preference number: 4 (lower is better)
Translates to: HQLLEHLQYRHLLEQGEEVEHAF*WARNSV
Trigger: AACTGAATTCCTCGCCCACCAGAACGCATGTTCTAC...TTCCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGTAGAACATGCGTTCTaGTGGGCGAGGAATTCAGTT +
Preference number: 4 (lower is better)
Translates to: VGSPITGASSVPAPSGAGVEHAF*WARNSV
Trigger: AACTGAATTCCTCGCCCACCAGAACGCATGTTCTAC...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGTTGTTGGGGTTCTCCTaGCCCCCAATTATCACCATT +
Preference number: 4 (lower is better)
Translates to: VGSPITGASSVPAPSGAGLLGFS*PPIITI
Trigger: AATGGTGATAATTGGGGGCCAGGAGAACCCCAACAA...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGGAGGACCCAGAATCTaGGGGGTTGCTATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: FSLLPRVGSPITGASSVPGGPRI*GVAMLC
Trigger: ACAGAGCATAGCAACCCCCCAGATTCTGGGTCCTCC...CGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GGGGGCCATCCCCTTGTAAGCACAGTAATTTCCAAGCTCAGGGACTACAGAAAAGGAGGACCCAGAATCTaGGGGGTTGCTATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: GGHPLVSTVISKLRDYRKGGPRI*GVAMLC
Trigger: ACAGAGCATAGCAACCCCCCAGATTCTGGGTCCTCC...TTTTCTGTAGTCCCTGAGCTTGGAAATTACTGTGCTTACAAGGGGATGGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGGGAAGAAGGCCTGCTTaGGCGTTTCTGCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQGRRPA*AFLPLW
Trigger: CCACAGGGGCAGAAACGCCCAAGCAGGCCTTCTTCC...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450879.2
ENST00000546363.5
CDS-3UTR CCA 90 bp TTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGTGTGGGAACGAAGGTaGATCTGCAGGGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: FSLLPRVGSPITGASSVPVWERR*ICRALS
Trigger: TGACAGTGCCCTGCAGATCCACCTTCGTTCCCACAC...CGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp CACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAATTCTCACGATGCCGGTaGAAATGCACTTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: HQLLEHLQYRHLLEQGEEFSRCR*KCTLRL
Trigger: CAACCTCAAAGTGCATTTCCACCGGCATCGTGAGAA...TTCCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGTTCTCACGATGCCGGTaGAAATGCACTTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: GLGHQLLEHLQYRHLLEQFSRCR*KCTLRL
Trigger: CAACCTCAAAGTGCATTTCCACCGGCATCGTGAGAA...CTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGTTCTCACGATGCCGGTaGAAATGCACTTTGAGGTTG +
Preference number: 4 (lower is better)
Translates to: VGSPITGASSVPAPSGAGFSRCR*KCTLRL
Trigger: CAACCTCAAAGTGCATTTCCACCGGCATCGTGAGAA...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTGGGACAAAGAGCAGCAGGTACTCTGGTACTGGGTGTaGGTTCATCTGCACATGTGG +
Preference number: 4 (lower is better)
Translates to: GRSFCEAVSALWDKEQQVLWYWV*VHLHMW
Trigger: CCACATGTGCAGATGAACCCACACCCAGTACCAGAG...TACCTGCTGCTCTTTGTCCCACAGAGCAGAAACAGCTTCACAAAAGGACCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp AGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCCTCCTCGGCCTTCTCTaGTGGCACGGACATACCATA +
Preference number: 4 (lower is better)
Translates to: SWRGLGTLTSQNLYLNVTLLGLL*WHGHTI
Trigger: TATGGTATGTCCGTGCCACCAGAGAAGGCCGAGGAG...GGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTGGCTGTGCCTGCACTaGTGGAGAGCAGAGTCAGGC +
Preference number: 4 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQWLCLH*WRAESG
Trigger: GCCTGACTCTGCTCTCCACCAGTGCAGGCACAGCCA...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGCCAGTGGACTTGAAGTaGTTGGTAAGCAGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLPVDLK*LVSSAQ
Trigger: CTGGGCACTGCTTACCAACCACTTCAAGTCCACTGG...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCCAGGGGCAGAGGTGGTaGGGGCTCCTGAGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VLATFLNSLIISSSTMLTQGQRW*GLLRQL
Trigger: CAGCTGCCTCAGGAGCCCCCACCACCTCTGCCCCTG...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGAGACAGATGACACACTaGTTAGGTCCAGAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: VGSPITGASSVPAPSGAGRQMTH*LGPEEA
Trigger: AGCCTCTTCTGGACCTAACCAGTGTGTCATCTGTCT...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TCCTGGGAGACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTGAGAGGTCACACGCAGATTACCCCTaGTGGAGAAGGCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: SWETSWQEISLFPNFERSHADYP*WRRLCH
Trigger: GTGGCAGAGCCTTCTCCACCAGGGGTAATCTGCGTG...TGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCGCTTCCCTGCTCCATTaGCTGAGGCTGATCCAGGCT +
Preference number: 4 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTIASLLH*LRLIQA
Trigger: AGCCTGGATCAGCCTCAGCCAATGGAGCAGGGAAGC...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGAGAGCGGCCCCTCCTTaGGGTGGGTCTTCTGATGCT +
Preference number: 4 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQRAAPP*GGSSDA
Trigger: AGCATCAGAAGACCCACCCCAAGGAGGGGCCGCTCT...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAAATTCCAGGGCTTCATaGGCAGGCCATTTGACAGGA +
Preference number: 4 (lower is better)
Translates to: RVGSPITGASSVPAPSGANSRAS*AGHLTG
Trigger: TCCTGTCAAATGGCCTGCCCATGAAGCCCTGGAATT...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTATGGTGGGGCCAGGCTTaGAGTGGTAGTGGAGGTGGA +
Preference number: 4 (lower is better)
Translates to: HFSLLPRVGSPITGASSVWWGQA*SGSGGG
Trigger: TCCACCTCCACTACCACTCCAAGCCTGGCCCCACCA...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGGCCAAACAGCACTGGTaGGGCCAGGCTTGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQAKQHW*GQAWSG
Trigger: ACCACTCCAAGCCTGGCCCCACCAGTGCTGTTTGGC...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp AGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGCCTGGATCCCATTGTTaGAGGCACCTTCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: RGLGTLTSQNLYLNVTIRPGSHC*RHLPSH
Trigger: GTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGG...CCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp CTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTTCTCCTTGGCTTCCCTaGATCCCATTGTTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LPRVGSPITGASSVPAPSSPWLP*IPLLEA
Trigger: TGCCTCCAACAATGGGATCCAGGGAAGCCAAGGAGA...AGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGTCTCCTTGGCTTCCCTaGATCCCATTGTTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLSPWLP*IPLLEA
Trigger: TGCCTCCAACAATGGGATCCAGGGAAGCCAAGGAGA...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GAGGTCATCATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAAGGGCTGTCTTCTCCTTaGCTTCCCTGGATCCCATTG +
Preference number: 4 (lower is better)
Translates to: EVIMNEKLERSWHTDQPKGLSSP*LPWIPL
Trigger: CAATGGGATCCAGGGAAGCCAAGGAGAAGACAGCCC...TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCATGATGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GGAGCTGGTCTCCCAAAGTCTGGGACTCTTAAGAACCAGACAATGACAAAGACAAGTACCGGCACCTTCTaGAGCAGGGGGAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: GAGLPKSGTLKNQTMTKTSTGTF*SRGRKK
Trigger: CTTCTTCCTCCCCCTGCTCCAGAAGGTGCCGGTACT...TGTCTTTGTCATTGTCTGGTTCTTAAGAGTCCCAGACTTTGGGAGACCAGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGCGTTCTCAGACGCGCTaGGACCTTCGCAGTCCGAGA +
Preference number: 4 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQRSQTR*DLRSPR
Trigger: TCTCGGACTGCGAAGGTCCCAGCGCGTCTGAGAACG...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000546363.5
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCAAGGAATGCCACATACTaGTTCTGTGGCAGCGACCAG +
Preference number: 4 (lower is better)
Translates to: SLLPRVGSPITGASSVPARNATY*FCGSDQ
Trigger: CTGGTCGCTGCCACAGAACCAGTATGTGGCATTCCT...TGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611430.4
ENST00000613414.4
CDS-3UTR TCA 90 bp GGAGCTGGTCTCCCAAAGTCTGGGACTCTTAAGAACCAGACAATGACAAAGACAAATGGATATTGGGATTaGGGGAGGCGATGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GAGLPKSGTLKNQTMTKTNGYWD*GRRWPL
Trigger: CAGCGGCCATCGCCTCCCTCAATCCCAATATCCATT...TGTCTTTGTCATTGTCTGGTTCTTAAGAGTCCCAGACTTTGGGAGACCAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537235.2
CDS-3UTR TCA 90 bp GGAGCTGGTCTCCCAAAGTCTGGGACTCTTAAGAACCAGACAATGACAAAGACATGCAGAAAACACAAGTaGAGAGCGGCCCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GAGLPKSGTLKNQTMTKTCRKHK*RAAPPW
Trigger: CCAAGGAGGGGCCGCTCTTCACTTGTGTTTTCTGCA...TGTCTTTGTCATTGTCTGGTTCTTAAGAGTCCCAGACTTTGGGAGACCAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR TCA 90 bp TTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGAGGTCTTGGCACACTaGCCAGCCAAAACCTTTACC +
Preference number: 4 (lower is better)
Translates to: FSLLPRVGSPITGASSVPEVLAH*PAKTFT
Trigger: GGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTC...CGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp GAGGTCATCATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAAGAGGTCTTGGCACACTaGCCAGCCAAAACCTTTACC +
Preference number: 4 (lower is better)
Translates to: EVIMNEKLERSWHTDQPKEVLAH*PAKTFT
Trigger: GGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTC...TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCATGATGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp GTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGCTTGTTTCCCAACTTTaGGAGGTCATCATGAATGAG +
Preference number: 4 (lower is better)
Translates to: VTNYWSIFSTGTFWSRGRLVSQL*EVIMNE
Trigger: CTCATTCATGATGACCTCTCAAAGTTGGGAAACAAG...CCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCTCAGTCATCTGCATCTaGTGGATCTGCCGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTISVICI*WICRCC
Trigger: GCAGCAGCGGCAGATCCATCAGATGCAGATGACTGA...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR TCA 90 bp TGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGTCTCCCGTCTGTTCTTaGCATTTTACTAGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: WVTNYWSIFSTGTFWSRGSPVCS*HFTRLG
Trigger: TCCTAACCTAGTAAAATGTCAAGAACAGACGGGAGA...CCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000613414.4
ENST00000614342.1
CDS-3UTR GCA 90 bp AGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGCAGCGACCAGGAAATaGCCTGAAGACTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RGLGTLTSQNLYLNVTIRAATRK*PEDSSP
Trigger: AGGAGAGGAGTCTTCAGGGCATTTCCTGGTCGCTGC...CCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR GCA 90 bp ATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTCAGAAGCGGCATTTGTaGCTTCCACCAGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: MNEKLERSWHTDQPKPLPQKRHL*LPPGFS
Trigger: GGAGAAGCCTGGTGGAAGGCACAAATGCCGCTTCTG...AGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGGGTACTTCTCACGATaGCGGTGGAAATGCACTTTG +
Preference number: 4 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLGYFSR*RWKCTL
Trigger: CAAAGTGCATTTCCACCGGCATCGTGAGAAGTACCC...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGGCATGCGAGTTGCCGTaGTACTTTCTGCCACTCCAC +
Preference number: 4 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVACELP*YFLPLH
Trigger: GTGGAGTGGCAGAAAGTAGCACGGCAACTCGCATGC...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGACTTACTTAGTTGCATaGGAGTTGCCGTGCTACTTT +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGETYLVA*ELPCYF
Trigger: AAAGTAGCACGGCAACTCGCATGCAACTAAGTAAGT...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp CCCCTTGTAAGCACAGTAATTTCCAAGCTCAGGGACTACAGAAAAGCCACTAGGGTGGCCCACGAAATGTaGACGCAGATTACCCCTGGT +
Preference number: 4 (lower is better)
Translates to: PLVSTVISKLRDYRKATRVAHEM*TQITPG
Trigger: ACCAGGGGTAATCTGCGTGCACATTTCGTGGGCCAC...CCTAGTGGCTTTTCTGTAGTCCCTGAGCTTGGAAATTACTGTGCTTACAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp AGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGTGGCCCACGAAATGTaGACGCAGATTACCCCTGGT +
Preference number: 4 (lower is better)
Translates to: RGLGTLTSQNLYLNVTIRVAHEM*TQITPG
Trigger: ACCAGGGGTAATCTGCGTGCACATTTCGTGGGCCAC...CCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp ATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTGTGGCCCACGAAATGTaGACGCAGATTACCCCTGGT +
Preference number: 4 (lower is better)
Translates to: MNEKLERSWHTDQPKPLPVAHEM*TQITPG
Trigger: ACCAGGGGTAATCTGCGTGCACATTTCGTGGGCCAC...AGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp AGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCTGCATCCGGACATGCTaGTGCAGAGTGACAGCATTG +
Preference number: 4 (lower is better)
Translates to: SWRGLGTLTSQNLYLNVTCIRTC*CRVTAL
Trigger: CAATGCTGTCACTCTGCAGCAGCATGTCCGGATGCA...GGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGAGGTGCATCCGGACATaGTGCTGCAGAGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVRCIRT*CCRVTA
Trigger: TGCTGTCACTCTGCAGCAGCATGTCCGGATGCACCT...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TCCTGGGAGACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTGAGAGGTCAAGGTGCATCCGGACATaGTGCTGCAGAGTGACAGCA +
Preference number: 4 (lower is better)
Translates to: SWETSWQEISLFPNFERSRCIRT*CCRVTA
Trigger: TGCTGTCACTCTGCAGCAGCATGTCCGGATGCACCT...TGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp AGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGTCCACCTTCAGGGAGTaGAGTACCACCGTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: RGLGTLTSQNLYLNVTIRSTFRE*STTVGD
Trigger: ATCCCCAACGGTGGTACTGCACTCCCTGAAGGTGGA...CCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGATTTACTAGCTTCTCTCCGGTTTaGCCCCCTCTTCCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: GTLTSQNLYLNVTIRGFTSFSPV*PPLPCL
Trigger: GAGGCAAGGAAGAGGGGGGCAAACCGGAGAGAAGCT...AGTAAATCCCCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGAGCTTCTCTCCGGTTTaGCCCCCTCTTCCTTGCCTC +
Preference number: 4 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQSFSPV*PPLPCL
Trigger: GAGGCAAGGAAGAGGGGGGCAAACCGGAGAGAAGCT...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp ATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTGGGACAAAGAGCAGGCCTTTCTGCTGCTaGTCTCTCCTGGCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: ITLGGPFVKLFLLCGTKSRPFCC*SLLAPF
Trigger: GAAAGGAGCCAGGAGAGAGCAGCAGCAGAAAGGCCT...GCTCTTTGTCCCACAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp TTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGGAGGAGGAGGAAGATaGCAGTGTCTTGCTGGTTTG +
Preference number: 4 (lower is better)
Translates to: FSLLPRVGSPITGASSVPGGGGR*QCLAGL
Trigger: CAAACCAGCAAGACACTGGCATCTTCCTCCTCCTCC...CGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp GGAGCTGGTCTCCCAAAGTCTGGGACTCTTAAGAACCAGACAATGACAAAGACATGTTGGGGTTTCCGCTaGTTTCGCCGAGACATTCCC +
Preference number: 4 (lower is better)
Translates to: GAGLPKSGTLKNQTMTKTCWGFR*FRRDIP
Trigger: GGGAATGTCTCGGCGAAAGCAGCGGAAACCCCAACA...TGTCTTTGTCATTGTCTGGTTCTTAAGAGTCCCAGACTTTGGGAGACCAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp CTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGCGAGGAATTCAGTTaGGTCAGTGAATTGTGCGCA +
Preference number: 4 (lower is better)
Translates to: LPRVGSPITGASSVPAPSGEEFS*VSELCA
Trigger: TGCGCACAATTCACTGACCCAACTGAATTCCTCGCC...AGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTAAGGCCGAAGAGTTGTTaGGGTTCTCCTGGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: HFSLLPRVGSPITGASSVRPKSC*GSPGPQ
Trigger: TTGGGGGCCAGGAGAACCCCAACAACTCTTCGGCCT...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGGGAGGACCCAGAATCTaGGGGGTTGCTATGCTCTGT +
Preference number: 4 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVGGPRI*GVAMLC
Trigger: ACAGAGCATAGCAACCCCCCAGATTCTGGGTCCTCC...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp AGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGCTGTCAGGTGGTGGTaGTGGTGGCAAAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: RGLGTLTSQNLYLNVTIRAVRWW*WWQRRL
Trigger: CAGTCTTCTTTGCCACCACCACCACCACCTGACAGC...CCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCTGGATCCCATTGTTaGAGGCACCTTCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: HFSLLPRVGSPITGASSVPGSHC*RHLPSH
Trigger: GTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGG...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GAGGTCATCATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAATCTCCTTGGCTTCCCTaGATCCCATTGTTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: EVIMNEKLERSWHTDQPKSPWLP*IPLLEA
Trigger: TGCCTCCAACAATGGGATCCAGGGAAGCCAAGGAGA...TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCATGATGACCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp ATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTGGGACAAAGAGCGGGCTGTCTTCTCCTTaGCTTCCCTGGATCCCATTG +
Preference number: 4 (lower is better)
Translates to: ITLGGPFVKLFLLCGTKSGLSSP*LPWIPL
Trigger: CAATGGGATCCAGGGAAGCCAAGGAGAAGACAGCCC...GCTCTTTGTCCCACAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGAGTACCGGCACCTTCTaGAGCAGGGGGAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQSTGTF*SRGRKK
Trigger: CTTCTTCCTCCCCCTGCTCCAGAAGGTGCCGGTACT...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGTGGGTCACCAATTACTaGAGCATCTTCAGTACCGGC +
Preference number: 4 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLWVTNY*SIFSTG
Trigger: GCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TCCTGGGAGACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTGAGAGGTCATCACACCAGGGAAGCTaGAGAGGGTTCCCCTTGAGA +
Preference number: 4 (lower is better)
Translates to: SWETSWQEISLFPNFERSSHQGS*RGFPLR
Trigger: TCTCAAGGGGAACCCTCTCCAGCTTCCCTGGTGTGA...TGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp CTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTTCCGAGATTAACTGTTaGGGTTTCCGCTGCTTTCGC +
Preference number: 4 (lower is better)
Translates to: LPRVGSPITGASSVPAPSSEINC*GFRCFR
Trigger: GCGAAAGCAGCGGAAACCCCAACAGTTAATCTCGGA...AGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTAAATGGATATTGGGATTaGGGGAGGCGATGGCCGCTG +
Preference number: 4 (lower is better)
Translates to: HFSLLPRVGSPITGASSVNGYWD*GRRWPL
Trigger: CAGCGGCCATCGCCTCCCTCAATCCCAATATCCATT...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS-3UTR TCA 90 bp GGGGGCCATCCCCTTGTAAGCACAGTAATTTCCAAGCTCAGGGACTACAGAAAAATTCAGTTGGGTCAGTaGATTGTGCGCAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: GGHPLVSTVISKLRDYRKIQLGQ*IVRSTW
Trigger: CCAAGTGCTGCGCACAATTCACTGACCCAACTGAAT...TTTTCTGTAGTCCCTGAGCTTGGAAATTACTGTGCTTACAAGGGGATGGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR TCA 90 bp ATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTAGAGAAAGGATGCTGTaGCCCCAGTGGGTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: MNEKLERSWHTDQPKPLPRERML*PQWVVK
Trigger: CTTTACCACCCACTGGGGTCACAGCATCCTTTCTCT...AGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGAGAAAGGATGCTGTaGCCCCAGTGGGTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTIRERML*PQWVVK
Trigger: CTTTACCACCCACTGGGGTCACAGCATCCTTTCTCT...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp CCTTGGCTTCCCTGGATCCCATTGTTGGAGGCACCTTCCCAGCCACAGTTCCTAGGCAAAGAAGACTGTTaGGTAGTTTTCTCATTACTG +
Preference number: 4 (lower is better)
Translates to: PWLPWIPLLEAPSQPQFLGKEDC*VVFSLL
Trigger: CAGTAATGAGAAAACTACTCAACAGTCTTCTTTGCC...TAGGAACTGTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAGCCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR TCA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTGCAGAAAACACAAGTaGAGAGCGGCCCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQCRKHK*RAAPPW
Trigger: CCAAGGAGGGGCCGCTCTTCACTTGTGTTTTCTGCA...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp TCCTGGGAGACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTGAGAGGTCACATGGGCAGGCCATTTaGCAGGAATGCCACATACTG +
Preference number: 4 (lower is better)
Translates to: SWETSWQEISLFPNFERSHGQAI*QECHIL
Trigger: CAGTATGTGGCATTCCTGTCAAATGGCCTGCCCATG...TGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGCATGGGCAGGCCATTTaGCAGGAATGCCACATACTG +
Preference number: 4 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVHGQAI*QECHIL
Trigger: CAGTATGTGGCATTCCTGTCAAATGGCCTGCCCATG...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp CACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAAACCTTTACCTTAATGTaGCCATCAGGGGATTTACTG +
Preference number: 4 (lower is better)
Translates to: HQLLEHLQYRHLLEQGEETFTLM*PSGDLL
Trigger: CAGTAAATCCCCTGATGGTCACATTAAGGTAAAGGT...TTCCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp CTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTAGAGGTCATCATGAATaGGAAGCTGGAGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: LPRVGSPITGASSVPAPSRGHHE*EAGEVL
Trigger: CAAGACCTCTCCAGCTTCTCATTCATGATGACCTCT...AGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp TGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGGTTCATCAACCATGCTaGCCAAAAATGCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: WVTNYWSIFSTGTFWSRGVHQPC*PKMLLK
Trigger: TTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAAC...CCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGTTCATCAACCATGCTaGCCAAAAATGCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGEVHQPC*PKMLLK
Trigger: TTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAAC...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp CCCCTTGTAAGCACAGTAATTTCCAAGCTCAGGGACTACAGAAAAGCCACTAGGGGAGAGGGTTCCCCTTaGGAAAGCTGCAGAGAATCT +
Preference number: 4 (lower is better)
Translates to: PLVSTVISKLRDYRKATRGEGSP*ESCRES
Trigger: AGATTCTCTGCAGCTTTCTCAAGGGGAACCCTCTCC...CCTAGTGGCTTTTCTGTAGTCCCTGAGCTTGGAAATTACTGTGCTTACAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGCAGAAGCGGCATTTGTaGCTTCCACCAGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQQKRHL*LPPGFS
Trigger: GGAGAAGCCTGGTGGAAGGCACAAATGCCGCTTCTG...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGGGTACTTCTCACGATaGCGGTGGAAATGCACTTTG +
Preference number: 4 (lower is better)
Translates to: FSLLPRVGSPITGASSVPGYFSR*RWKCTL
Trigger: CAAAGTGCATTTCCACCGGCATCGTGAGAAGTACCC...CGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp CCTTGGCTTCCCTGGATCCCATTGTTGGAGGCACCTTCCCAGCCACAGTTCCTAATTCTTGGGTTCCACTaGTTTCATGAGCACAAACTT +
Preference number: 4 (lower is better)
Translates to: PWLPWIPLLEAPSQPQFLILGFH*FHEHKL
Trigger: AAGTTTGTGCTCATGAAAGCAGTGGAACCCAAGAAT...TAGGAACTGTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAGCCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp ATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTACCGCCACAGCTCCTTaGCGGTCAATCTTTTCTACC +
Preference number: 4 (lower is better)
Translates to: MNEKLERSWHTDQPKPLPTATAP*RSIFST
Trigger: GGTAGAAAAGATTGACCGGCAAGGAGCTGTGGCGGT...AGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCACCGCCACAGCTCCTTaGCGGTCAATCTTTTCTACC +
Preference number: 4 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTITATAP*RSIFST
Trigger: GGTAGAAAAGATTGACCGGCAAGGAGCTGTGGCGGT...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp AGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGACCGCCACAGCTCCTTaGCGGTCAATCTTTTCTACC +
Preference number: 4 (lower is better)
Translates to: RGLGTLTSQNLYLNVTIRTATAP*RSIFST
Trigger: GGTAGAAAAGATTGACCGGCAAGGAGCTGTGGCGGT...CCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCGCCACAGCTCCTTaGCGGTCAATCTTTTCTACC +
Preference number: 4 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVTATAP*RSIFST
Trigger: GGTAGAAAAGATTGACCGGCAAGGAGCTGTGGCGGT...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TCCTGGGAGACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTGAGAGGTCATGCATCCGGACATGCTaGTGCAGAGTGACAGCATTG +
Preference number: 4 (lower is better)
Translates to: SWETSWQEISLFPNFERSCIRTC*CRVTAL
Trigger: CAATGCTGTCACTCTGCAGCAGCATGTCCGGATGCA...TGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp CCCCTTGTAAGCACAGTAATTTCCAAGCTCAGGGACTACAGAAAAGCCACTAGGTGCATCCGGACATGCTaGTGCAGAGTGACAGCATTG +
Preference number: 4 (lower is better)
Translates to: PLVSTVISKLRDYRKATRCIRTC*CRVTAL
Trigger: CAATGCTGTCACTCTGCAGCAGCATGTCCGGATGCA...CCTAGTGGCTTTTCTGTAGTCCCTGAGCTTGGAAATTACTGTGCTTACAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp AAAATCAGGGCTCATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTCCACCTTCAGGGAGTaGAGTACCACCGTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: KIRAHNSGRSFCEAVSALSTFRE*STTVGD
Trigger: ATCCCCAACGGTGGTACTGCACTCCCTGAAGGTGGA...CAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTATGAGCCCTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp GGGGGCCATCCCCTTGTAAGCACAGTAATTTCCAAGCTCAGGGACTACAGAAAACTGTACCTGGTGGTGTaGCAGGAGCATATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: GGHPLVSTVISKLRDYRKLYLVV*QEHMLL
Trigger: AAGAAGCATATGCTCCTGGCACACCACCAGGTACAG...TTTTCTGTAGTCCCTGAGCTTGGAAATTACTGTGCTTACAAGGGGATGGCCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp AAAATCAGGGCTCATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTGTTGGGGTTTCCGCTaGTTTCGCCGAGACATTCCC +
Preference number: 4 (lower is better)
Translates to: KIRAHNSGRSFCEAVSALCWGFR*FRRDIP
Trigger: GGGAATGTCTCGGCGAAAGCAGCGGAAACCCCAACA...CAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTATGAGCCCTGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614342.1
CDS-3UTR CCA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCATTGTGCGCAGCACTTaGCACAGACTTGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTIIVRST*HRLGGD
Trigger: ATCACCCCCAAGTCTGTGCCAAGTGCTGCGCACAAT...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp CCCCTTGTAAGCACAGTAATTTCCAAGCTCAGGGACTACAGAAAAGCCACTAGGGAACATGCGTTCTGGTaGGCGAGGAATTCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: PLVSTVISKLRDYRKATREHAFW*ARNSVG
Trigger: CCCAACTGAATTCCTCGCCCACCAGAACGCATGTTC...CCTAGTGGCTTTTCTGTAGTCCCTGAGCTTGGAAATTACTGTGCTTACAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp TCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCAGTAGAACATGCGTTCTaGTGGGCGAGGAATTCAGTT +
Preference number: 4 (lower is better)
Translates to: SLLPRVGSPITGASSVPAVEHAF*WARNSV
Trigger: AACTGAATTCCTCGCCCACCAGAACGCATGTTCTAC...TGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp CTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGTAGAACATGCGTTCTaGTGGGCGAGGAATTCAGTT +
Preference number: 4 (lower is better)
Translates to: LPRVGSPITGASSVPAPSVEHAF*WARNSV
Trigger: AACTGAATTCCTCGCCCACCAGAACGCATGTTCTAC...AGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGCTGCCAGTAGTCCCGTaGTGCTTGGGAATGCCAGAT +
Preference number: 4 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQLPVVP*CLGMPD
Trigger: ATCTGGCATTCCCAAGCACCACGGGACTACTGGCAG...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGGTGTGGGAACGAAGGTaGATCTGCAGGGCACTGTCA +
Preference number: 4 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQVWERR*ICRALS
Trigger: TGACAGTGCCCTGCAGATCCACCTTCGTTCCCACAC...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GAGGTCATCATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAAGTTCATCTGCACATGTaGGTACTTCTCACGATGCCG +
Preference number: 4 (lower is better)
Translates to: EVIMNEKLERSWHTDQPKVHLHM*VLLTMP
Trigger: CGGCATCGTGAGAAGTACCCACATGTGCAGATGAAC...TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCATGATGACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TCCTGGGAGACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTGAGAGGTCACTCTGGTACTGGGTGTaGGTTCATCTGCACATGTGG +
Preference number: 4 (lower is better)
Translates to: SWETSWQEISLFPNFERSLWYWV*VHLHMW
Trigger: CCACATGTGCAGATGAACCCACACCCAGTACCAGAG...TGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGCTCGGCCTTCTCTGGTaGCACGGACATACCATAAGG +
Preference number: 4 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQLGLLW*HGHTIR
Trigger: CCTTATGGTATGTCCGTGCCACCAGAGAAGGCCGAG...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACTCCTCGGCCTTCTCTaGTGGCACGGACATACCATA +
Preference number: 4 (lower is better)
Translates to: HFSLLPRVGSPITGASSVLLGLL*WHGHTI
Trigger: TATGGTATGTCCGTGCCACCAGAGAAGGCCGAGGAG...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGATTTACTCTCCTCGGCCTTCTCTaGTGGCACGGACATACCATA +
Preference number: 4 (lower is better)
Translates to: GTLTSQNLYLNVTIRGFTLLGLL*WHGHTI
Trigger: TATGGTATGTCCGTGCCACCAGAGAAGGCCGAGGAG...AGTAAATCCCCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCATCAACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCCCTCCACCTGGAGTaGCTGCCTCCTCCTCGGCCT +
Preference number: 4 (lower is better)
Translates to: FINHADQKCSLKIRTSHFPLHLE*LPPPRP
Trigger: AGGCCGAGGAGGAGGCAGCCACTCCAGGTGGAGGGG...GAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCGAAAGCAGGGAGTCCTaGAGCCGTGGCTGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: VLATFLNSLIISSSTMLTESRES*SRGCAC
Trigger: GCAGGCACAGCCACGGCTCCAGGACTCCCTGCTTTC...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TCCTGGGAGACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTGAGAGGTCACCAGTGGACTTGAAGTaGTTGGTAAGCAGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: SWETSWQEISLFPNFERSPVDLK*LVSSAQ
Trigger: CTGGGCACTGCTTACCAACCACTTCAAGTCCACTGG...TGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp AGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCAGGTGGTGGTGGTGGTaGCAAAGAAGACTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: SWRGLGTLTSQNLYLNVTRWWWW*QRRLLS
Trigger: ACTCAACAGTCTTCTTTGCCACCACCACCACCACCT...GGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGACATACTGGTTCTGGTaGTGTGCCAGGAGCATATGC +
Preference number: 4 (lower is better)
Translates to: FSLLPRVGSPITGASSVPTYWFW*CARSIC
Trigger: GCATATGCTCCTGGCACACCACCAGAACCAGTATGT...CGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450879.2
ENST00000546363.5
CDS-3UTR CCA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGGCCACATACTGGTTCTaGTGGTGTGCCAGGAGCATA +
Preference number: 4 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVATYWF*WCARSI
Trigger: TATGCTCCTGGCACACCACCAGAACCAGTATGTGGC...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450879.2
ENST00000546363.5
CDS-3UTR CCA 90 bp TTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGAATTCCAGGGCTTCATaGGCAGGCCATTTGACAGGA +
Preference number: 4 (lower is better)
Translates to: FSLLPRVGSPITGASSVPNSRAS*AGHLTG
Trigger: TCCTGTCAAATGGCCTGCCCATGAAGCCCTGGAATT...CGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGATTTACTGGGCTGTCTTCTCCTTaGCTTCCCTGGATCCCATTG +
Preference number: 4 (lower is better)
Translates to: GTLTSQNLYLNVTIRGFTGLSSP*LPWIPL
Trigger: CAATGGGATCCAGGGAAGCCAAGGAGAAGACAGCCC...AGTAAATCCCCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TATGTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGCCCAGACTGCGGAGATaGAGATCGGCAGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: YVLATFLNSLIISSSTMLPRLRR*RSAAAG
Trigger: CCCCGCCGCTGCCGATCTCCATCTCCGCAGTCTGGG...CAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAACATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000611430.4
CDS-3UTR CCA 90 bp GGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGATTTACTAAGGGCTGTACCTGGTaGTGTGCCAGGAGCATATGC +
Preference number: 4 (lower is better)
Translates to: GTLTSQNLYLNVTIRGFTKGCTW*CARSIC
Trigger: GCATATGCTCCTGGCACACCACCAGGTACAGCCCTT...AGTAAATCCCCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGAATGCCACATACTaGTTCTGTGGCAGCGACCAG +
Preference number: 4 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTIRNATY*FCGSDQ
Trigger: CTGGTCGCTGCCACAGAACCAGTATGTGGCATTCCT...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611430.4
ENST00000613414.4
3UTR CAA 72 bp AGGGGGAGGAAGAAGGAATGTACAGTTTGCTACTTCTaGTCTATGATGGGCTTCTCAGGCACTGCCTTGGGT +
Preference number: 4 (lower is better)
Translates to: RGRKKECTVCYF*SMMGFSGTALG
Trigger: ACCCAAGGCAGTGCCTGAGAAGCCCATCATAGACAAGAAGTAGCAAACTGTACATTCCTTCTTCCTCCCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR TCA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGATTCAGTTGGGTCAGTaGATTGTGCGCAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVIQLGQ*IVRSTW
Trigger: CCAAGTGCTGCGCACAATTCACTGACCCAACTGAAT...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp TCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCATATGCTCTGTGTCCATaGCCTGAGGATTATTGTGAC +
Preference number: 4 (lower is better)
Translates to: SLLPRVGSPITGASSVPAYALCP*PEDYCD
Trigger: GTCACAATAATCCTCAGGTCATGGACACAGAGCATA...TGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATCACTCCACTGATGGCTaGGCCCTCACTCCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNHSTDG*ALTPWG
Trigger: CCCCCAGGGAGTGAGGGCTCAGCCATCAGTGGAGTG...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACATGGGCAGGCCATTTaGCAGGAATGCCACATACTG +
Preference number: 4 (lower is better)
Translates to: HFSLLPRVGSPITGASSVHGQAI*QECHIL
Trigger: CAGTATGTGGCATTCCTGTCAAATGGCCTGCCCATG...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp ATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTGCTACTTCTTGTCTATaGTGGGCTTCTCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: MNEKLERSWHTDQPKPLPATSCL*WASQAL
Trigger: CAGTGCCTGAGAAGCCCATCATAGACAAGAAGTAGC...AGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp GAGGTCATCATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAAAGAGGTCATCATGAATaGGAAGCTGGAGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: EVIMNEKLERSWHTDQPKRGHHE*EAGEVL
Trigger: CAAGACCTCTCCAGCTTCTCATTCATGATGACCTCT...TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCATGATGACCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCACTTGTTTCCCAACTTTaGGAGGTCATCATGAATGAG +
Preference number: 4 (lower is better)
Translates to: RVGSPITGASSVPAPSGALVSQL*EVIMNE
Trigger: CTCATTCATGATGACCTCTCAAAGTTGGGAAACAAG...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp CACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAAGTTCATCAACCATGCTaGCCAAAAATGCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: HQLLEHLQYRHLLEQGEEVHQPC*PKMLLK
Trigger: TTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAAC...TTCCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp AGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGTGGGAGGTCCTTTTGTaGAGCTGTTTCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: RGLGTLTSQNLYLNVTIRWEVLL*SCFCSV
Trigger: CACAGAGCAGAAACAGCTTCACAAAAGGACCTCCCA...CCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR TCA 90 bp TCCTGGGAGACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTGAGAGGTCATGGGAGGTCCTTTTGTaGAGCTGTTTCTGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SWETSWQEISLFPNFERSWEVLL*SCFCSV
Trigger: CACAGAGCAGAAACAGCTTCACAAAAGGACCTCCCA...TGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp TCCTGGGAGACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTGAGAGGTCAGGGTACTTCTCACGATaGCGGTGGAAATGCACTTTG +
Preference number: 4 (lower is better)
Translates to: SWETSWQEISLFPNFERSGYFSR*RWKCTL
Trigger: CAAAGTGCATTTCCACCGGCATCGTGAGAAGTACCC...TGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGATTCTTGGGTTCCACTaGTTTCATGAGCACAAACTT +
Preference number: 4 (lower is better)
Translates to: GLGHQLLEHLQYRHLLEQILGFH*FHEHKL
Trigger: AAGTTTGTGCTCATGAAAGCAGTGGAACCCAAGAAT...CTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGACCAACTTACTTAGTTaGATGCGAGTTGCCGTGCTA +
Preference number: 4 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLTNLLS*MRVAVL
Trigger: TAGCACGGCAACTCGCATGCAACTAAGTAAGTTGGT...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATGGGGCAGGAATTCTGTaGCCGGGCAGCTGGACTGGC +
Preference number: 4 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNGAGIL*PGSWTG
Trigger: GCCAGTCCAGCTGCCCGGGCACAGAATTCCTGCCCC...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGATCCGGACATGCTGCTaGAGAGTGACAGCATTGGTG +
Preference number: 4 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQIRTCC*RVTALV
Trigger: CACCAATGCTGTCACTCTGCAGCAGCATGTCCGGAT...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TTCATCAACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCGGCTGCTGGGACTGCTaGTGGGGGAAACTCCGTGCC +
Preference number: 4 (lower is better)
Translates to: FINHADQKCSLKIRTSHFGCWDC*WGKLRA
Trigger: GGCACGGAGTTTCCCCCAGCAGCAGTCCCAGCAGCC...GAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp ATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTGGGACAAAGAGCCTCCTAAAACACCACTaGTTCCCTGCTCCATTGGCT +
Preference number: 4 (lower is better)
Translates to: ITLGGPFVKLFLLCGTKSLLKHH*FPAPLA
Trigger: AGCCAATGGAGCAGGGAAGCAGTGGTGTTTTAGGAG...GCTCTTTGTCCCACAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp ATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTGCAACAGCACCTGCCTaGAGATTTGCTCAGTCATCT +
Preference number: 4 (lower is better)
Translates to: MNEKLERSWHTDQPKPLPATAPA*RFAQSS
Trigger: AGATGACTGAGCAAATCTGCAGGCAGGTGCTGTTGC...AGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp ATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTCTGTACCTGGTGGTGTaGCAGGAGCATATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: MNEKLERSWHTDQPKPLPLYLVV*QEHMLL
Trigger: AAGAAGCATATGCTCCTGGCACACCACCAGGTACAG...AGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTAATTGTGCGCAGCACTTaGCACAGACTTGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: HFSLLPRVGSPITGASSVIVRST*HRLGGD
Trigger: ATCACCCCCAAGTCTGTGCCAAGTGCTGCGCACAAT...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp ATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTGGCGAGGAATTCAGTTaGGTCAGTGAATTGTGCGCA +
Preference number: 4 (lower is better)
Translates to: MNEKLERSWHTDQPKPLPGEEFS*VSELCA
Trigger: TGCGCACAATTCACTGACCCAACTGAATTCCTCGCC...AGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGATTTACTGAACATGCGTTCTGGTaGGCGAGGAATTCAGTTGGG +
Preference number: 4 (lower is better)
Translates to: GTLTSQNLYLNVTIRGFTEHAFW*ARNSVG
Trigger: CCCAACTGAATTCCTCGCCCACCAGAACGCATGTTC...AGTAAATCCCCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGTTGTTGGGGTTCTCCTaGCCCCCAATTATCACCATT +
Preference number: 4 (lower is better)
Translates to: FSLLPRVGSPITGASSVPLLGFS*PPIITI
Trigger: AATGGTGATAATTGGGGGCCAGGAGAACCCCAACAA...CGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCGTTCATCTGCACATGTaGGTACTTCTCACGATGCCG +
Preference number: 4 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTIVHLHM*VLLTMP
Trigger: CGGCATCGTGAGAAGTACCCACATGTGCAGATGAAC...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp ATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTGTTCATCTGCACATGTaGGTACTTCTCACGATGCCG +
Preference number: 4 (lower is better)
Translates to: MNEKLERSWHTDQPKPLPVHLHM*VLLTMP
Trigger: CGGCATCGTGAGAAGTACCCACATGTGCAGATGAAC...AGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGATTTACTCCAGTGGACTTGAAGTaGTTGGTAAGCAGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GTLTSQNLYLNVTIRGFTPVDLK*LVSSAQ
Trigger: CTGGGCACTGCTTACCAACCACTTCAAGTCCACTGG...AGTAAATCCCCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATTGCTGGGACTGCTGCTaGGGGAAACTCCGTGCCCCG +
Preference number: 4 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNCWDCC*GKLRAP
Trigger: CGGGGCACGGAGTTTCCCCCAGCAGCAGTCCCAGCA...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp ATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTAGGTGGTGGTGGTGGTaGCAAAGAAGACTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: MNEKLERSWHTDQPKPLPRWWWW*QRRLLS
Trigger: ACTCAACAGTCTTCTTTGCCACCACCACCACCACCT...AGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGAGGTGGTGGTGGTGGTaGCAAAGAAGACTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVRWWWW*QRRLLS
Trigger: ACTCAACAGTCTTCTTTGCCACCACCACCACCACCT...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTAGTCAGGTGGTGGTGGTaGTGGCAAAGAAGACTGTTG +
Preference number: 4 (lower is better)
Translates to: HFSLLPRVGSPITGASSVVRWWW*WQRRLL
Trigger: CAACAGTCTTCTTTGCCACCACCACCACCACCTGAC...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGATTTACTGTCAGGTGGTGGTGGTaGTGGCAAAGAAGACTGTTG +
Preference number: 4 (lower is better)
Translates to: GTLTSQNLYLNVTIRGFTVRWWW*WQRRLL
Trigger: CAACAGTCTTCTTTGCCACCACCACCACCACCTGAC...AGTAAATCCCCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCAGAGCGGCCCCTCCTTaGGGTGGGTCTTCTGATGCT +
Preference number: 4 (lower is better)
Translates to: VLATFLNSLIISSSTMLTRAAPP*GGSSDA
Trigger: AGCATCAGAAGACCCACCCCAAGGAGGGGCCGCTCT...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TCCTGGGAGACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTGAGAGGTCAACATACTGGTTCTGGTaGTGTGCCAGGAGCATATGC +
Preference number: 4 (lower is better)
Translates to: SWETSWQEISLFPNFERSTYWFW*CARSIC
Trigger: GCATATGCTCCTGGCACACCACCAGAACCAGTATGT...TGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450879.2
ENST00000546363.5
CDS-3UTR CCA 90 bp ATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTAATTCCAGGGCTTCATaGGCAGGCCATTTGACAGGA +
Preference number: 4 (lower is better)
Translates to: MNEKLERSWHTDQPKPLPNSRAS*AGHLTG
Trigger: TCCTGTCAAATGGCCTGCCCATGAAGCCCTGGAATT...AGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCGCCAAACAGCACTGGTaGGGCCAGGCTTGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: VLATFLNSLIISSSTMLTAKQHW*GQAWSG
Trigger: ACCACTCCAAGCCTGGCCCCACCAGTGCTGTTTGGC...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGATTTACTTCTCCTTGGCTTCCCTaGATCCCATTGTTGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GTLTSQNLYLNVTIRGFTSPWLP*IPLLEA
Trigger: TGCCTCCAACAATGGGATCCAGGGAAGCCAAGGAGA...AGTAAATCCCCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGTGGGTCACCAATTACTaGAGCATCTTCAGTACCGGC +
Preference number: 4 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVWVTNY*SIFSTG
Trigger: GCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GGAGCTGGTCTCCCAAAGTCTGGGACTCTTAAGAACCAGACAATGACAAAGACAAAGCTGGAGAGGTCTTaGCACACTGACCAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: GAGLPKSGTLKNQTMTKTKLERS*HTDQPK
Trigger: TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTT...TGTCTTTGTCATTGTCTGGTTCTTAAGAGTCCCAGACTTTGGGAGACCAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp CTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTTCCTGGGAGACCTCTTaGCAAGAAATCAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: LPRVGSPITGASSVPAPSSWETS*QEISLF
Trigger: AAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA...AGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp CTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTTTCCCAAATATCTCCTaGGAGACCTCTTGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: LPRVGSPITGASSVPAPSFPNIS*ETSWQE
Trigger: TTCTTGCCAAGAGGTCTCCCAGGAGATATTTGGGAA...AGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGTTCCCAAATATCTCCTaGGAGACCTCTTGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLFPNIS*ETSWQE
Trigger: TTCTTGCCAAGAGGTCTCCCAGGAGATATTTGGGAA...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
3UTR CAA 72 bp TGGAGCTGGAATTCCAGGGCTTCATGGGCAGGCCATTaGACAGGAATGCCACATACTGGTTCTAGAAAGATA +
Preference number: 4 (lower is better)
Translates to: WSWNSRASWAGH*TGMPHTGSRKI
Trigger: TATCTTTCTAGAACCAGTATGTGGCATTCCTGTCAAATGGCCTGCCCATGAAGCCCTGGAATTCCAGCTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR TCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCGCACAGACTTGGGGGTaGTCCTCCTCGCTAGCATCA +
Preference number: 4 (lower is better)
Translates to: VLATFLNSLIISSSTMLTAQTWG*SSSLAS
Trigger: TGATGCTAGCGAGGAGGATCACCCCCAAGTCTGTGC...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp GAGGTCATCATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAATATGCTCTGTGTCCATaGCCTGAGGATTATTGTGAC +
Preference number: 4 (lower is better)
Translates to: EVIMNEKLERSWHTDQPKYALCP*PEDYCD
Trigger: GTCACAATAATCCTCAGGTCATGGACACAGAGCATA...TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCATGATGACCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp GGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGATTTACTGCTACTTCTTGTCTATaGTGGGCTTCTCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: GTLTSQNLYLNVTIRGFTATSCL*WASQAL
Trigger: CAGTGCCTGAGAAGCCCATCATAGACAAGAAGTAGC...AGTAAATCCCCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTAGCTACTTCTTGTCTATaGTGGGCTTCTCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: HFSLLPRVGSPITGASSVATSCL*WASQAL
Trigger: CAGTGCCTGAGAAGCCCATCATAGACAAGAAGTAGC...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR GCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCTCAGCTGATCTGTGCTaGCTGGCAAGGCTGGGGAAG +
Preference number: 4 (lower is better)
Translates to: VLATFLNSLIISSSTMLTSADLC*LARLGK
Trigger: CTTCCCCAGCCTTGCCAGGCAGCACAGATCAGCTGA...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTAGCAGGGCACTGTCACTaGCAAATACTTTGGCACAGA +
Preference number: 4 (lower is better)
Translates to: HFSLLPRVGSPITGASSVAGHCH*QILWHR
Trigger: TCTGTGCCAAAGTATTTGGCAGTGACAGTGCCCTGC...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGCTCCTAAAACACCACTaGTTCCCTGCTCCATTGGCT +
Preference number: 4 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQLLKHH*FPAPLA
Trigger: AGCCAATGGAGCAGGGAAGCAGTGGTGTTTTAGGAG...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACGCTCAAGAAAGCCCTaGCTGCAGAAAACACAAGTG +
Preference number: 4 (lower is better)
Translates to: HFSLLPRVGSPITGASSVRSRKP*LQKTQV
Trigger: CACTTGTGTTTTCTGCAGGCAGGGCTTTCTTGAGCG...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACTGGTTCTGGTGGTGTaGCAGGAGCATATGCTTCTT +
Preference number: 4 (lower is better)
Translates to: HFSLLPRVGSPITGASSVLVLVV*QEHMLL
Trigger: AAGAAGCATATGCTCCTGGCACACCACCAGAACCAG...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450879.2
ENST00000546363.5
CDS-3UTR GCA 90 bp TATGTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGGGGCTTCTCAGGCACTaGCTTGGGTGCAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: YVLATFLNSLIISSSTMLGLLRH*LGCRRL
Trigger: CAGCCTCCTGCACCCAAGGCAGTGCCTGAGAAGCCC...CAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR GCA 90 bp GTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAAGGAATGTACAGTTTaGTACTTCTTGTCTATGATG +
Preference number: 4 (lower is better)
Translates to: VTNYWSIFSTGTFWSRGRKECTV*YFLSMM
Trigger: CATCATAGACAAGAAGTAGCAAACTGTACATTCCTT...CCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR GCA 90 bp GGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGATTTACTGCAACAGCACCTGCCTaGAGATTTGCTCAGTCATCT +
Preference number: 4 (lower is better)
Translates to: GTLTSQNLYLNVTIRGFTATAPA*RFAQSS
Trigger: AGATGACTGAGCAAATCTGCAGGCAGGTGCTGTTGC...AGTAAATCCCCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp ATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTCCTTTTTGGCTAGGCTaGAATGCCAAATGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: MNEKLERSWHTDQPKPLPPFWLG*NAKCRC
Trigger: GCACCTACATTTGGCATTGCAGCCTAGCCAAAAAGG...AGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCCCTTTTTGGCTAGGCTaGAATGCCAAATGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTIPFWLG*NAKCRC
Trigger: GCACCTACATTTGGCATTGCAGCCTAGCCAAAAAGG...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp GGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGATTTACTGGCGAGGAATTCAGTTaGGTCAGTGAATTGTGCGCA +
Preference number: 4 (lower is better)
Translates to: GTLTSQNLYLNVTIRGFTGEEFS*VSELCA
Trigger: TGCGCACAATTCACTGACCCAACTGAATTCCTCGCC...AGTAAATCCCCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp ATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTGTAGAACATGCGTTCTaGTGGGCGAGGAATTCAGTT +
Preference number: 4 (lower is better)
Translates to: MNEKLERSWHTDQPKPLPVEHAF*WARNSV
Trigger: AACTGAATTCCTCGCCCACCAGAACGCATGTTCTAC...AGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp AGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGTTGTTGGGGTTCTCCTaGCCCCCAATTATCACCATT +
Preference number: 4 (lower is better)
Translates to: RGLGTLTSQNLYLNVTIRLLGFS*PPIITI
Trigger: AATGGTGATAATTGGGGGCCAGGAGAACCCCAACAA...CCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCTTGTTGGGGTTCTCCTaGCCCCCAATTATCACCATT +
Preference number: 4 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTILLGFS*PPIITI
Trigger: AATGGTGATAATTGGGGGCCAGGAGAACCCCAACAA...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCAGGCCGAAGAGTTGTTaGGGTTCTCCTGGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: VLATFLNSLIISSSTMLTRPKSC*GSPGPQ
Trigger: TTGGGGGCCAGGAGAACCCCAACAACTCTTCGGCCT...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCATCAACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCCAGGTGGGATCCGTaGGCACGGAGGACCCAGAAT +
Preference number: 4 (lower is better)
Translates to: FINHADQKCSLKIRTSHFPRWDP*ARRTQN
Trigger: ATTCTGGGTCCTCCGTGCCCACGGATCCCACCTGGG...GAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCATCAACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCGCAGGGGTGGGTTTGTaGCTTCGCCCAACCCCTCCA +
Preference number: 4 (lower is better)
Translates to: FINHADQKCSLKIRTSHFAGVGL*LRPTPP
Trigger: TGGAGGGGTTGGGCGAAGCCACAAACCCACCCCTGC...GAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATCTGATCTGTGCTGCCTaGCAAGGCTGGGGAAGGGGC +
Preference number: 4 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNLICAA*QGWGRG
Trigger: GCCCCTTCCCCAGCCTTGCCAGGCAGCACAGATCAG...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TATGTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGTGGCTTCAGGAGCCCTaGGGAGGCAGTGGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: YVLATFLNSLIISSSTMLWLQEP*GGSGLK
Trigger: CTTGAGGCCACTGCCTCCCCAGGGCTCCTGAAGCCA...CAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGGTTCATCTGCACATGTaGGTACTTCTCACGATGCCG +
Preference number: 4 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQVHLHM*VLLTMP
Trigger: CGGCATCGTGAGAAGTACCCACATGTGCAGATGAAC...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TCCTGGGAGACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTGAGAGGTCAAGACAGATGACACACTaGTTAGGTCCAGAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: SWETSWQEISLFPNFERSRQMTH*LGPEEA
Trigger: AGCCTCTTCTGGACCTAACCAGTGTGTCATCTGTCT...TGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCCACGCAGATTACCCCTaGTGGAGAAGGCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: VLATFLNSLIISSSTMLTHADYP*WRRLCH
Trigger: GTGGCAGAGCCTTCTCCACCAGGGGTAATCTGCGTG...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp AAAATCAGGGCTCATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGAGGTGGTGGTGGTGGTaGCAAAGAAGACTGTTGAGT +
Preference number: 4 (lower is better)
Translates to: KIRAHNSGRSFCEAVSALRWWWW*QRRLLS
Trigger: ACTCAACAGTCTTCTTTGCCACCACCACCACCACCT...CAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTATGAGCCCTGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp GGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGATTTACTAATTCCAGGGCTTCATaGGCAGGCCATTTGACAGGA +
Preference number: 4 (lower is better)
Translates to: GTLTSQNLYLNVTIRGFTNSRAS*AGHLTG
Trigger: TCCTGTCAAATGGCCTGCCCATGAAGCCCTGGAATT...AGTAAATCCCCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTATGGGTCACCAATTACTaGAGCATCTTCAGTACCGGC +
Preference number: 4 (lower is better)
Translates to: HFSLLPRVGSPITGASSVWVTNY*SIFSTG
Trigger: GCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGATTTACTAAGCTGGAGAGGTCTTaGCACACTGACCAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: GTLTSQNLYLNVTIRGFTKLERS*HTDQPK
Trigger: TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTT...AGTAAATCCCCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGTCCTGGGAGACCTCTTaGCAAGAAATCAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: FSLLPRVGSPITGASSVPSWETS*QEISLF
Trigger: AAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA...CGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GGGGGCCATCCCCTTGTAAGCACAGTAATTTCCAAGCTCAGGGACTACAGAAAATCCTGGGAGACCTCTTaGCAAGAAATCAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: GGHPLVSTVISKLRDYRKSWETS*QEISLF
Trigger: AAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA...TTTTCTGTAGTCCCTGAGCTTGGAAATTACTGTGCTTACAAGGGGATGGCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCAGGGGGATATTCAAGTaGCCACTGCCTACCCCTGGG +
Preference number: 4 (lower is better)
Translates to: VLATFLNSLIISSSTMLTRGIFK*PLPTPG
Trigger: CCCAGGGGTAGGCAGTGGCCACTTGAATATCCCCCT...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGATCCCCCATGATCCCTaGTACACCTCTGCACACTAT +
Preference number: 4 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQIPHDP*YTSAHY
Trigger: ATAGTGTGCAGAGGTGTACCAGGGATCATGGGGGAT...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCTATGCTCTGTGTCCATaGCCTGAGGATTATTGTGAC +
Preference number: 4 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTIYALCP*PEDYCD
Trigger: GTCACAATAATCCTCAGGTCATGGACACAGAGCATA...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp TCCTGGGAGACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTGAGAGGTCATATGCTCTGTGTCCATaGCCTGAGGATTATTGTGAC +
Preference number: 4 (lower is better)
Translates to: SWETSWQEISLFPNFERSYALCP*PEDYCD
Trigger: GTCACAATAATCCTCAGGTCATGGACACAGAGCATA...TGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp AGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGTATGCTCTGTGTCCATaGCCTGAGGATTATTGTGAC +
Preference number: 4 (lower is better)
Translates to: RGLGTLTSQNLYLNVTIRYALCP*PEDYCD
Trigger: GTCACAATAATCCTCAGGTCATGGACACAGAGCATA...CCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATGGCTCTCTGTGGCACTaGGTGCTGTTGTGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNGSLWH*VLLWRP
Trigger: TGGCCTCCACAACAGCACTCAGTGCCACAGAGAGCC...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGGCAAAGAAGACTGTTaGGTAGTTTTCTCATTACTG +
Preference number: 4 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLGKEDC*VVFSLL
Trigger: CAGTAATGAGAAAACTACTCAACAGTCTTCTTTGCC...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp GAGGTCATCATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAAACCTTTACCTTAATGTaGCCATCAGGGGATTTACTG +
Preference number: 4 (lower is better)
Translates to: EVIMNEKLERSWHTDQPKTFTLM*PSGDLL
Trigger: CAGTAAATCCCCTGATGGTCACATTAAGGTAAAGGT...TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCATGATGACCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTAAGAGGTCATCATGAATaGGAAGCTGGAGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: HFSLLPRVGSPITGASSVRGHHE*EAGEVL
Trigger: CAAGACCTCTCCAGCTTCTCATTCATGATGACCTCT...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp AGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCTCTCCCGTCTGTTCTTaGCATTTTACTAGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: SWRGLGTLTSQNLYLNVTSPVCS*HFTRLG
Trigger: TCCTAACCTAGTAAAATGTCAAGAACAGACGGGAGA...GGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000613414.4
ENST00000614342.1
CDS-3UTR GCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCGCAGCGACCAGGAAATaGCCTGAAGACTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: VLATFLNSLIISSSTMLTAATRK*PEDSSP
Trigger: AGGAGAGGAGTCTTCAGGGCATTTCCTGGTCGCTGC...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR GCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCCCAGTAGTCCCGTGGTaGTTGGGAATGCCAGATGAG +
Preference number: 4 (lower is better)
Translates to: VLATFLNSLIISSSTMLTPVVPW*LGMPDE
Trigger: CTCATCTGGCATTCCCAAGCACCACGGGACTACTGG...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCCAGAAGCGGCATTTGTaGCTTCCACCAGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VLATFLNSLIISSSTMLTQKRHL*LPPGFS
Trigger: GGAGAAGCCTGGTGGAAGGCACAAATGCCGCTTCTG...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCCGATGCCGGTGGAAATaGACTTTGAGGTTGCCACGG +
Preference number: 4 (lower is better)
Translates to: VLATFLNSLIISSSTMLTRCRWK*TLRLPR
Trigger: CCGTGGCAACCTCAAAGTGCATTTCCACCGGCATCG...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp CTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTATTCTTGGGTTCCACTaGTTTCATGAGCACAAACTT +
Preference number: 4 (lower is better)
Translates to: LPRVGSPITGASSVPAPSILGFH*FHEHKL
Trigger: AAGTTTGTGCTCATGAAAGCAGTGGAACCCAAGAAT...AGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GGAGCTGGTCTCCCAAAGTCTGGGACTCTTAAGAACCAGACAATGACAAAGACAACCAACTTACTTAGTTaGATGCGAGTTGCCGTGCTA +
Preference number: 4 (lower is better)
Translates to: GAGLPKSGTLKNQTMTKTTNLLS*MRVAVL
Trigger: TAGCACGGCAACTCGCATGCAACTAAGTAAGTTGGT...TGTCTTTGTCATTGTCTGGTTCTTAAGAGTCCCAGACTTTGGGAGACCAGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp ATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTGGGACAAAGAGCACCAACTTACTTAGTTaGATGCGAGTTGCCGTGCTA +
Preference number: 4 (lower is better)
Translates to: ITLGGPFVKLFLLCGTKSTNLLS*MRVAVL
Trigger: TAGCACGGCAACTCGCATGCAACTAAGTAAGTTGGT...GCTCTTTGTCCCACAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp TATGTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGCGCAGGCCTTTCTGCTaGTGCTCTCTCCTGGCTCCT +
Preference number: 4 (lower is better)
Translates to: YVLATFLNSLIISSSTMLRRPFC*CSLLAP
Trigger: AGGAGCCAGGAGAGAGCAGCAGCAGAAAGGCCTGCG...CAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCTGTGCCAGGAGCATATaGTTCTTGAGGGTAGCCCGC +
Preference number: 4 (lower is better)
Translates to: VLATFLNSLIISSSTMLTCARSI*FLRVAR
Trigger: GCGGGCTACCCTCAAGAAGCATATGCTCCTGGCACA...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TATGTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGTATTCAAGTGGCCACTaGCTACCCCTGGGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: YVLATFLNSLIISSSTMLYSSGH*LPLGAE
Trigger: CTCCGCCCCCAGGGGTAGGCAGTGGCCACTTGAATA...CAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAACATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTATTGTTGGGGTTCTCCTaGCCCCCAATTATCACCATT +
Preference number: 4 (lower is better)
Translates to: HFSLLPRVGSPITGASSVLLGFS*PPIITI
Trigger: AATGGTGATAATTGGGGGCCAGGAGAACCCCAACAA...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCATCAACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCGGAAGAAGGCCTGCTTaGGCGTTTCTGCCCCTGTGG +
Preference number: 4 (lower is better)
Translates to: FINHADQKCSLKIRTSHFGRRPA*AFLPLW
Trigger: CCACAGGGGCAGAAACGCCCAAGCAGGCCTTCTTCC...GAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450879.2
ENST00000546363.5
CDS-3UTR CCA 90 bp TATGTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGGCCAAACAGCACTGGTaGGGCCAGGCTTGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: YVLATFLNSLIISSSTMLAKQHW*GQAWSG
Trigger: ACCACTCCAAGCCTGGCCCCACCAGTGCTGTTTGGC...CAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp ATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTTCCCAAATATCTCCTaGGAGACCTCTTGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: MNEKLERSWHTDQPKPLPFPNIS*ETSWQE
Trigger: TTCTTGCCAAGAGGTCTCCCAGGAGATATTTGGGAA...AGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATGAGGCGGGGAGAAGCTaGAGTGAGAAAGCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNEAGRS*SEKAGR
Trigger: TCTCCCCGCTTTCTCACTCCAGCTTCTCCCCGCCTC...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000611430.4
CDS-3UTR CCA 90 bp CCCCTTGTAAGCACAGTAATTTCCAAGCTCAGGGACTACAGAAAAGCCACTAGGAGAAAAACAGGCTCATaGGATCGTGGGGTCATCTTT +
Preference number: 4 (lower is better)
Translates to: PLVSTVISKLRDYRKATRRKTGS*DRGVIF
Trigger: AAAGATGACCCCACGATCCCATGAGCCTGTTTTTCT...CCTAGTGGCTTTTCTGTAGTCCCTGAGCTTGGAAATTACTGTGCTTACAAGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR TCA 90 bp GGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGATTTACTTATGCTCTGTGTCCATaGCCTGAGGATTATTGTGAC +
Preference number: 4 (lower is better)
Translates to: GTLTSQNLYLNVTIRGFTYALCP*PEDYCD
Trigger: GTCACAATAATCCTCAGGTCATGGACACAGAGCATA...AGTAAATCCCCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp AGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGACCTTTACCTTAATGTaGCCATCAGGGGATTTACTG +
Preference number: 4 (lower is better)
Translates to: RGLGTLTSQNLYLNVTIRTFTLM*PSGDLL
Trigger: CAGTAAATCCCCTGATGGTCACATTAAGGTAAAGGT...CCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp ATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTCTTGTTTCCCAACTTTaGGAGGTCATCATGAATGAG +
Preference number: 4 (lower is better)
Translates to: MNEKLERSWHTDQPKPLPLVSQL*EVIMNE
Trigger: CTCATTCATGATGACCTCTCAAAGTTGGGAAACAAG...AGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp CCCCTTGTAAGCACAGTAATTTCCAAGCTCAGGGACTACAGAAAAGCCACTAGGTCTCCCGTCTGTTCTTaGCATTTTACTAGGTTAGGA +
Preference number: 4 (lower is better)
Translates to: PLVSTVISKLRDYRKATRSPVCS*HFTRLG
Trigger: TCCTAACCTAGTAAAATGTCAAGAACAGACGGGAGA...CCTAGTGGCTTTTCTGTAGTCCCTGAGCTTGGAAATTACTGTGCTTACAAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR GCA 90 bp TATGTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGCAATCAGCTGATCTGTaGTGCCTGGCAAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: YVLATFLNSLIISSSTMLQSADL*CLARLG
Trigger: CCCCAGCCTTGCCAGGCAGCACAGATCAGCTGATTG...CAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACTTACTTAGTTGCATaGGAGTTGCCGTGCTACTTT +
Preference number: 4 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVTYLVA*ELPCYF
Trigger: AAAGTAGCACGGCAACTCGCATGCAACTAAGTAAGT...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAAAGGAATGTACAGTTTaGTACTTCTTGTCTATGATG +
Preference number: 4 (lower is better)
Translates to: RVGSPITGASSVPAPSGAKECTV*YFLSMM
Trigger: CATCATAGACAAGAAGTAGCAAACTGTACATTCCTT...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATAGGCCGAAGAGTTGTTaGGGTTCTCCTGGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNRPKSC*GSPGPQ
Trigger: TTGGGGGCCAGGAGAACCCCAACAACTCTTCGGCCT...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TATGTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGAGGCCGAAGAGTTGTTaGGGTTCTCCTGGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: YVLATFLNSLIISSSTMLRPKSC*GSPGPQ
Trigger: TTGGGGGCCAGGAGAACCCCAACAACTCTTCGGCCT...CAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAACATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCCTCTGGTACTGGGTGTaGGTTCATCTGCACATGTGG +
Preference number: 4 (lower is better)
Translates to: VLATFLNSLIISSSTMLTLWYWV*VHLHMW
Trigger: CCACATGTGCAGATGAACCCACACCCAGTACCAGAG...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TATGTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGCACGCAGATTACCCCTaGTGGAGAAGGCTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: YVLATFLNSLIISSSTMLHADYP*WRRLCH
Trigger: GTGGCAGAGCCTTCTCCACCAGGGGTAATCTGCGTG...CAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCGTCAGGTGGTGGTGGTaGTGGCAAAGAAGACTGTTG +
Preference number: 4 (lower is better)
Translates to: VLATFLNSLIISSSTMLTVRWWW*WQRRLL
Trigger: CAACAGTCTTCTTTGCCACCACCACCACCACCTGAC...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCATCAACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCTGGATCCCATTGTTaGAGGCACCTTCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: FINHADQKCSLKIRTSHFPGSHC*RHLPSH
Trigger: GTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGG...GAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATAGTACCGGCACCTTCTaGAGCAGGGGGAGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNSTGTF*SRGRKK
Trigger: CTTCTTCCTCCCCCTGCTCCAGAAGGTGCCGGTACT...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTATCCTGGGAGACCTCTTaGCAAGAAATCAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: HFSLLPRVGSPITGASSVSWETS*QEISLF
Trigger: AAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGATTTACTTCCTGGGAGACCTCTTaGCAAGAAATCAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: GTLTSQNLYLNVTIRGFTSWETS*QEISLF
Trigger: AAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA...AGTAAATCCCCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp AAAATCAGGGCTCATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTTCCCAAATATCTCCTaGGAGACCTCTTGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: KIRAHNSGRSFCEAVSALFPNIS*ETSWQE
Trigger: TTCTTGCCAAGAGGTCTCCCAGGAGATATTTGGGAA...CAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTATGAGCCCTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp GGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGATTTACTTTCCCAAATATCTCCTaGGAGACCTCTTGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: GTLTSQNLYLNVTIRGFTFPNIS*ETSWQE
Trigger: TTCTTGCCAAGAGGTCTCCCAGGAGATATTTGGGAA...AGTAAATCCCCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTAAGAAAAACAGGCTCATaGGATCGTGGGGTCATCTTT +
Preference number: 4 (lower is better)
Translates to: HFSLLPRVGSPITGASSVRKTGS*DRGVIF
Trigger: AAAGATGACCCCACGATCCCATGAGCCTGTTTTTCT...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR TCA 90 bp CCCCTTGTAAGCACAGTAATTTCCAAGCTCAGGGACTACAGAAAAGCCACTAGGGGCAAAGAAGACTGTTaGGTAGTTTTCTCATTACTG +
Preference number: 4 (lower is better)
Translates to: PLVSTVISKLRDYRKATRGKEDC*VVFSLL
Trigger: CAGTAATGAGAAAACTACTCAACAGTCTTCTTTGCC...CCTAGTGGCTTTTCTGTAGTCCCTGAGCTTGGAAATTACTGTGCTTACAAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR TCA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATTGCAGAAAACACAAGTaGAGAGCGGCCCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNCRKHK*RAAPPW
Trigger: CCAAGGAGGGGCCGCTCTTCACTTGTGTTTTCTGCA...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGACCTTTACCTTAATGTaGCCATCAGGGGATTTACTG +
Preference number: 4 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQTFTLM*PSGDLL
Trigger: CAGTAAATCCCCTGATGGTCACATTAAGGTAAAGGT...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR GCA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATGCAGCGACCAGGAAATaGCCTGAAGACTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNAATRK*PEDSSP
Trigger: AGGAGAGGAGTCTTCAGGGCATTTCCTGGTCGCTGC...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR GCA 90 bp TTCATCAACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCGTGGTGCTTGGGAATaGCAGATGAGGCGAGGCAAT +
Preference number: 4 (lower is better)
Translates to: FINHADQKCSLKIRTSHFRGAWE*QMRRGN
Trigger: ATTGCCTCGCCTCATCTGGCATTCCCAAGCACCACG...GAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TATGTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGCGATGCCGGTGGAAATaGACTTTGAGGTTGCCACGG +
Preference number: 4 (lower is better)
Translates to: YVLATFLNSLIISSSTMLRCRWK*TLRLPR
Trigger: CCGTGGCAACCTCAAAGTGCATTTCCACCGGCATCG...CAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TTCATCAACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCGATGCCGGTGGAAATaGACTTTGAGGTTGCCACGG +
Preference number: 4 (lower is better)
Translates to: FINHADQKCSLKIRTSHFRCRWK*TLRLPR
Trigger: CCGTGGCAACCTCAAAGTGCATTTCCACCGGCATCG...GAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGATTCTTGGGTTCCACTaGTTTCATGAGCACAAACTT +
Preference number: 4 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVILGFH*FHEHKL
Trigger: AAGTTTGTGCTCATGAAAGCAGTGGAACCCAAGAAT...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATGCATGCGAGTTGCCGTaGTACTTTCTGCCACTCCAC +
Preference number: 4 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNACELP*YFLPLH
Trigger: GTGGAGTGGCAGAAAGTAGCACGGCAACTCGCATGC...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp GGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGATTTACTACTTACTTAGTTGCATaGGAGTTGCCGTGCTACTTT +
Preference number: 4 (lower is better)
Translates to: GTLTSQNLYLNVTIRGFTTYLVA*ELPCYF
Trigger: AAAGTAGCACGGCAACTCGCATGCAACTAAGTAAGT...AGTAAATCCCCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TATGTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGTCCACCTTCAGGGAGTaGAGTACCACCGTTGGGGAT +
Preference number: 4 (lower is better)
Translates to: YVLATFLNSLIISSSTMLSTFRE*STTVGD
Trigger: ATCCCCAACGGTGGTACTGCACTCCCTGAAGGTGGA...CAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TATGTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGAGGCCTTTCTGCTGCTaGTCTCTCCTGGCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: YVLATFLNSLIISSSTMLRPFCC*SLLAPF
Trigger: GAAAGGAGCCAGGAGAGAGCAGCAGCAGAAAGGCCT...CAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGAAGGAATGTACAGTTTaGTACTTCTTGTCTATGATG +
Preference number: 4 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLKECTV*YFLSMM
Trigger: CATCATAGACAAGAAGTAGCAAACTGTACATTCCTT...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR GCA 90 bp AGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCTTCTCTCTCAATCTTTaGAAGTCTTTAAAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: SWRGLGTLTSQNLYLNVTFSLNL*KSLKGR
Trigger: TCTCCCCTTTAAAGACTTGCAAAGATTGAGAGAGAA...GGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614342.1
CDS-3UTR CCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCGGCGAGGAATTCAGTTaGGTCAGTGAATTGTGCGCA +
Preference number: 4 (lower is better)
Translates to: VLATFLNSLIISSSTMLTGEEFS*VSELCA
Trigger: TGCGCACAATTCACTGACCCAACTGAATTCCTCGCC...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCATCAACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCTCGGCCTTCTCTGGTaGCACGGACATACCATAAGG +
Preference number: 4 (lower is better)
Translates to: FINHADQKCSLKIRTSHFLGLLW*HGHTIR
Trigger: CCTTATGGTATGTCCGTGCCACCAGAGAAGGCCGAG...GAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATCAGGCTGTCAGGTGGTaGTGGTGGTGGCAAAGAAGA +
Preference number: 4 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNQAVRW*WWWQRR
Trigger: TCTTCTTTGCCACCACCACCACCACCTGACAGCCTG...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCTGGGTCACCAATTACTaGAGCATCTTCAGTACCGGC +
Preference number: 4 (lower is better)
Translates to: VLATFLNSLIISSSTMLTWVTNY*SIFSTG
Trigger: GCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATAAGGGCTGTACCTGGTaGTGTGCCAGGAGCATATGC +
Preference number: 4 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNKGCTW*CARSIC
Trigger: GCATATGCTCCTGGCACACCACCAGGTACAGCCCTT...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR TCA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATAGAGAAAGGATGCTGTaGCCCCAGTGGGTGGTAAAG +
Preference number: 4 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNRERML*PQWVVK
Trigger: CTTTACCACCCACTGGGGTCACAGCATCCTTTCTCT...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp GGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGATTTACTGGCAAAGAAGACTGTTaGGTAGTTTTCTCATTACTG +
Preference number: 4 (lower is better)
Translates to: GTLTSQNLYLNVTIRGFTGKEDC*VVFSLL
Trigger: CAGTAATGAGAAAACTACTCAACAGTCTTCTTTGCC...AGTAAATCCCCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR TCA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATGAGGTCTTGGCACACTaGCCAGCCAAAACCTTTACC +
Preference number: 4 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNEVLAH*PAKTFT
Trigger: GGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTC...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp AAAATCAGGGCTCATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGGTTCATCAACCATGCTaGCCAAAAATGCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: KIRAHNSGRSFCEAVSALVHQPC*PKMLLK
Trigger: TTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAAC...CAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTATGAGCCCTGATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR TCA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGGTTCATCAACCATGCTaGCCAAAAATGCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQVHQPC*PKMLLK
Trigger: TTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAAC...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR GCA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATATCCGGACATGCTGCTaGAGAGTGACAGCATTGGTG +
Preference number: 4 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNIRTCC*RVTALV
Trigger: CACCAATGCTGTCACTCTGCAGCAGCATGTCCGGAT...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCATCAACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCATTGTGCGCAGCACTTaGCACAGACTTGGGGGTGAT +
Preference number: 4 (lower is better)
Translates to: FINHADQKCSLKIRTSHFIVRST*HRLGGD
Trigger: ATCACCCCCAAGTCTGTGCCAAGTGCTGCGCACAAT...GAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCTTGTTGGGGTTCTCCTaGCCCCCAATTATCACCATT +
Preference number: 4 (lower is better)
Translates to: VLATFLNSLIISSSTMLTLLGFS*PPIITI
Trigger: AATGGTGATAATTGGGGGCCAGGAGAACCCCAACAA...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TATGTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGCCAGTGGACTTGAAGTaGTTGGTAAGCAGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: YVLATFLNSLIISSSTMLPVDLK*LVSSAQ
Trigger: CTGGGCACTGCTTACCAACCACTTCAAGTCCACTGG...CAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CCA 90 bp TATGTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGAGGAATGCCACATACTaGTTCTGGTGGTGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: YVLATFLNSLIISSSTMLRNATY*FWWCAR
Trigger: CCTGGCACACCACCAGAACCAGTATGTGGCATTCCT...CAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAACATA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546363.5
CDS-3UTR CCA 90 bp TATGTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGAGGCTCATGGGATCGTaGGGTCATCTTTTCGGGGAA +
Preference number: 4 (lower is better)
Translates to: YVLATFLNSLIISSSTMLRLMGS*GHLFGE
Trigger: TTCCCCGAAAAGATGACCCCACGATCCCATGAGCCT...CAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATAGGCTCATGGGATCGTaGGGTCATCTTTTCGGGGAA +
Preference number: 4 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNRLMGS*GHLFGE
Trigger: TTCCCCGAAAAGATGACCCCACGATCCCATGAGCCT...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATGCTGCCAGCCCTTTTTaGCTAGGCTGCAATGCCAAA +
Preference number: 4 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNAASPF*LGCNAK
Trigger: TTTGGCATTGCAGCCTAGCCAAAAAGGGCTGGCAGC...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR TCA 90 bp TTCATCAACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCATTCAGTTGGGTCAGTaGATTGTGCGCAGCACTTGG +
Preference number: 4 (lower is better)
Translates to: FINHADQKCSLKIRTSHFIQLGQ*IVRSTW
Trigger: CCAAGTGCTGCGCACAATTCACTGACCCAACTGAAT...GAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATGCTACTTCTTGTCTATaGTGGGCTTCTCAGGCACTG +
Preference number: 4 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNATSCL*WASQAL
Trigger: CAGTGCCTGAGAAGCCCATCATAGACAAGAAGTAGC...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCCAGCGCAAATCACTGTaGAGCAGAGATGTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: VLATFLNSLIISSSTMLTQRKSL*SRDVLL
Trigger: AAGAAGAACATCTCTGCTTCACAGTGATTTGCGCTG...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614342.1
CDS-3UTR GCA 90 bp TTCATCAACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCGGGTACTTCTCACGATaGCGGTGGAAATGCACTTTG +
Preference number: 4 (lower is better)
Translates to: FINHADQKCSLKIRTSHFGYFSR*RWKCTL
Trigger: CAAAGTGCATTTCCACCGGCATCGTGAGAAGTACCC...GAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATCTCCTAAAACACCACTaGTTCCCTGCTCCATTGGCT +
Preference number: 4 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNLLKHH*FPAPLA
Trigger: AGCCAATGGAGCAGGGAAGCAGTGGTGTTTTAGGAG...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TATGTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGCTCCTAAAACACCACTaGTTCCCTGCTCCATTGGCT +
Preference number: 4 (lower is better)
Translates to: YVLATFLNSLIISSSTMLLLKHH*FPAPLA
Trigger: AGCCAATGGAGCAGGGAAGCAGTGGTGTTTTAGGAG...CAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATCGCTCAAGAAAGCCCTaGCTGCAGAAAACACAAGTG +
Preference number: 4 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNRSRKP*LQKTQV
Trigger: CACTTGTGTTTTCTGCAGGCAGGGCTTTCTTGAGCG...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TATGTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGCGCTCAAGAAAGCCCTaGCTGCAGAAAACACAAGTG +
Preference number: 4 (lower is better)
Translates to: YVLATFLNSLIISSSTMLRSRKP*LQKTQV
Trigger: CACTTGTGTTTTCTGCAGGCAGGGCTTTCTTGAGCG...CAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TCCTGGGAGACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTGAGAGGTCAAAGGAATGTACAGTTTaGTACTTCTTGTCTATGATG +
Preference number: 4 (lower is better)
Translates to: SWETSWQEISLFPNFERSKECTV*YFLSMM
Trigger: CATCATAGACAAGAAGTAGCAAACTGTACATTCCTT...TGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR GCA 90 bp GGAGCTGGTCTCCCAAAGTCTGGGACTCTTAAGAACCAGACAATGACAAAGACAAAGGAATGTACAGTTTaGTACTTCTTGTCTATGATG +
Preference number: 4 (lower is better)
Translates to: GAGLPKSGTLKNQTMTKTKECTV*YFLSMM
Trigger: CATCATAGACAAGAAGTAGCAAACTGTACATTCCTT...TGTCTTTGTCATTGTCTGGTTCTTAAGAGTCCCAGACTTTGGGAGACCAGCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000613414.4
ENST00000614342.1
CDS-3UTR GCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCAATGCCAAATGTAGGTaGTCAGGTGCACCTACCAAA +
Preference number: 4 (lower is better)
Translates to: VLATFLNSLIISSSTMLTNAKCR*SGAPTK
Trigger: TTTGGTAGGTGCACCTGAGCACCTACATTTGGCATT...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCATCAACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCTGGGGTGGGAGACAATaGATATTGGGATTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: FINHADQKCSLKIRTSHFWGGRQ*ILGLRE
Trigger: CTCCCTCAATCCCAATATCCATTGTCTCCCACCCCA...GAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS-3UTR CCA 90 bp TTCATCAACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCAAGCTGGAGAGGTCTTaGCACACTGACCAGCCAAAA +
Preference number: 4 (lower is better)
Translates to: FINHADQKCSLKIRTSHFKLERS*HTDQPK
Trigger: TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTT...GAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATTCCGAGATTAACTGTTaGGGTTTCCGCTGCTTTCGC +
Preference number: 4 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNSEINC*GFRCFR
Trigger: GCGAAAGCAGCGGAAACCCCAACAGTTAATCTCGGA...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp TATGTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGAGAGGTCATCATGAATaGGAAGCTGGAGAGGTCTTG +
Preference number: 4 (lower is better)
Translates to: YVLATFLNSLIISSSTMLRGHHE*EAGEVL
Trigger: CAAGACCTCTCCAGCTTCTCATTCATGATGACCTCT...CAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAACATA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR GCA 90 bp TATGTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGTCTTCCCTACGCTTCTaGAGCTCCCATTGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: YVLATFLNSLIISSSTMLSSLRF*SSHCKS
Trigger: GCTTTTACAATGGGAGCTGCAGAAGCGTAGGGAAGA...CAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000614342.1
CDS-3UTR CCA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATGTAGAACATGCGTTCTaGTGGGCGAGGAATTCAGTT +
Preference number: 4 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNVEHAF*WARNSV
Trigger: AACTGAATTCCTCGCCCACCAGAACGCATGTTCTAC...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCATCAACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCAGACAGATGACACACTaGTTAGGTCCAGAAGAGGCT +
Preference number: 4 (lower is better)
Translates to: FINHADQKCSLKIRTSHFRQMTH*LGPEEA
Trigger: AGCCTCTTCTGGACCTAACCAGTGTGTCATCTGTCT...GAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR GCA 90 bp TATGTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGAATGCCAAATGTAGGTaGTCAGGTGCACCTACCAAA +
Preference number: 4 (lower is better)
Translates to: YVLATFLNSLIISSSTMLNAKCR*SGAPTK
Trigger: TTTGGTAGGTGCACCTGAGCACCTACATTTGGCATT...CAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAACATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CCA 90 bp TTCATCAACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCTCCTGGGAGACCTCTTaGCAAGAAATCAGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: FINHADQKCSLKIRTSHFSWETS*QEISLF
Trigger: AAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA...GAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp TATGTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGCTTGTTTCCCAACTTTaGGAGGTCATCATGAATGAG +
Preference number: 4 (lower is better)
Translates to: YVLATFLNSLIISSSTMLLVSQL*EVIMNE
Trigger: CTCATTCATGATGACCTCTCAAAGTTGGGAAACAAG...CAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAACATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR TCA 90 bp TTCATCAACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCGTTCATCAACCATGCTaGCCAAAAATGCTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: FINHADQKCSLKIRTSHFVHQPC*PKMLLK
Trigger: TTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAAC...GAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR GCA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCAAGGAATGTACAGTTTaGTACTTCTTGTCTATGATG +
Preference number: 4 (lower is better)
Translates to: VLATFLNSLIISSSTMLTKECTV*YFLSMM
Trigger: CATCATAGACAAGAAGTAGCAAACTGTACATTCCTT...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS TCA 90 bp GCCTCCCCCAGCCGCTGTACCTGTGGCAGCGACCAGGAAATGCCCTaGAGACTCCTCTCCTCTCCTCTCTGGGCCCCAGGTGGGATCCGT +
Preference number: 5 (lower is better)
Translates to: ASPSRCTCGSDQEMP*RLLSSPLWAPGGIR
Trigger: ACGGATCCCACCTGGGGCCCAGAGAGGAGAGGAGAGGAGTCTTCAGGGCATTTCCTGGTCGCTGCCACAGGTACAGCGGCTGGGGGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000541965.1
ENST00000614342.1
CDS TCA 90 bp GGAAGTGGAGGGCCAGGTGGGGTGGGAGACAATGGATATTGGGATTaGGGGAGGCGATGGCCGCTGGGTCTGCGGCAGCCTCTGCACCCA +
Preference number: 5 (lower is better)
Translates to: GSGGPGGVGDNGYWD*GRRWPLGLRQPLHP
Trigger: TGGGTGCAGAGGCTGCCGCAGACCCAGCGGCCATCGCCTCCCTCAATCCCAATATCCATTGTCTCCCACCCCACCTGGCCCTCCACTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS GCA 90 bp GGAGGCCACCAGAGGCTTGCGCTCAACCCCTCCACCTGGAGTGGCTaGCTCCTCCTCGGCCTTCTCTGGTGGCACGGACATACCATAAGG +
Preference number: 5 (lower is better)
Translates to: GGHQRLALNPSTWSG*LLLGLLWWHGHTIR
Trigger: CCTTATGGTATGTCCGTGCCACCAGAGAAGGCCGAGGAGGAGGCAGCCACTCCAGGTGGAGGGGTTGAGCGCAAGCCTCTGGTGGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS TCA 90 bp CTGCTTGGGCGTTTCTGCCCCTGTGGCAGCGACCAGGAAATGCCCTaGAGACTCCTCTCCTCTCCTCTCTGGGCCCCAGGTGGGATCCGT +
Preference number: 5 (lower is better)
Translates to: LLGRFCPCGSDQEMP*RLLSSPLWAPGGIR
Trigger: ACGGATCCCACCTGGGGCCCAGAGAGGAGAGGAGAGGAGTCTTCAGGGCATTTCCTGGTCGCTGCCACAGGGGCAGAAACGCCCAAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450879.2
ENST00000546363.5
CDS CCA 90 bp TTGTGGAGGCCACCAGAGGCTTGCGCTCAACCCCTCCACCTGGAGTaGCTGCCTCCTCCTCGGCCTTCTCTGGTGGCACGGACATACCAT +
Preference number: 5 (lower is better)
Translates to: LWRPPEACAQPLHLE*LPPPRPSLVARTYH
Trigger: ATGGTATGTCCGTGCCACCAGAGAAGGCCGAGGAGGAGGCAGCCACTCCAGGTGGAGGGGTTGAGCGCAAGCCTCTGGTGGCCTCCACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS TCA 90 bp CTGTGCCTGCACTGGTGGAGAGCAGAGTCAGGCTCTCTGTGGCACTaGGTGCTGTTGTGGAGGCCACCAGAGGCTTGCGCTCAACCCCTC +
Preference number: 5 (lower is better)
Translates to: LCLHWWRAESGSLWH*VLLWRPPEACAQPL
Trigger: GAGGGGTTGAGCGCAAGCCTCTGGTGGCCTCCACAACAGCACTCAGTGCCACAGAGAGCCTGACTCTGCTCTCCACCAGTGCAGGCACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS GCA 90 bp GGCCTCGGGCTGCCCCAAGACACTGTGCTGCCAGTAGTCCCGTGGTaGTTGGGAATGCCAGATGAGGCGAGGCAATCAGCTGATCTGTGC +
Preference number: 5 (lower is better)
Translates to: GLGLPQDTVLPVVPW*LGMPDEARQSADLC
Trigger: GCACAGATCAGCTGATTGCCTCGCCTCATCTGGCATTCCCAAGCACCACGGGACTACTGGCAGCACAGTGTCTTGGGGCAGCCCGAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS CCA 90 bp GCTCACCACTTCCATTCTTTGGCTTCAGGAGCCCTGGGGAGGCAGTaGCCTCAAGGCCTCGGGCTGCCCCAAGACACTGTGCTGCCAGTA +
Preference number: 5 (lower is better)
Translates to: AHHFHSLASGALGRQ*PQGLGLPQDTVLPV
Trigger: TACTGGCAGCACAGTGTCTTGGGGCAGCCCGAGGCCTTGAGGCCACTGCCTCCCCAGGGCTCCTGAAGCCAAAGAATGGAAGTGGTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS CCA 90 bp TCCGTAGCTCAGCTCACCACTTCCATTCTTTGGCTTCAGGAGCCCTaGGGAGGCAGTGGCCTCAAGGCCTCGGGCTGCCCCAAGACACTG +
Preference number: 5 (lower is better)
Translates to: SVAQLTTSILWLQEP*GGSGLKASGCPKTL
Trigger: CAGTGTCTTGGGGCAGCCCGAGGCCTTGAGGCCACTGCCTCCCCAGGGCTCCTGAAGCCAAAGAATGGAAGTGGTGAGCTGAGCTACGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS CCA 90 bp CAAGGCCTCGGGCTGCCCCAAGACACTGTGCTGCCAGTAGTCCCGTaGTGCTTGGGAATGCCAGATGAGGCGAGGCAATCAGCTGATCTG +
Preference number: 5 (lower is better)
Translates to: QGLGLPQDTVLPVVP*CLGMPDEARQSADL
Trigger: CAGATCAGCTGATTGCCTCGCCTCATCTGGCATTCCCAAGCACCACGGGACTACTGGCAGCACAGTGTCTTGGGGCAGCCCGAGGCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS CCA 90 bp CAGATGGGGCAGGAATTCTGTGCCCGGGCAGCTGGACTGGCCTTGTaGCCCACGAAATGTGCACGCAGATTACCCCTGGTGGAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: QMGQEFCARAAGLAL*PTKCARRLPLVEKA
Trigger: AGCCTTCTCCACCAGGGGTAATCTGCGTGCACATTTCGTGGGCCACAAGGCCAGTCCAGCTGCCCGGGCACAGAATTCCTGCCCCATCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAGGCCACCAGAGGCTaGCGCTCAACCCCTCCACCT +
Preference number: 5 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGEEATRG*RSTPPP
Trigger: AGGTGGAGGGGTTGAGCGCAAGCCTCTGGTGGCCTC...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS TCA 90 bp GGGTTTGTGGCTTCGCCCAACCCCTCCAGCAGAGAAAGGATGCTGTaGCCCCAGTGGGTGGTAAAGGTGGAAGAAGGCCTGCTTGGGCGT +
Preference number: 5 (lower is better)
Translates to: GFVASPNPSSRERML*PQWVVKVEEGLLGR
Trigger: ACGCCCAAGCAGGCCTTCTTCCACCTTTACCACCCACTGGGGTCACAGCATCCTTTCTCTGCTGGAGGGGTTGGGCGAAGCCACAAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS CCA 90 bp GACGAGAGCTCCTCTCGGATTCGTGCGCCATGGTTGTGGGGGAAGTaGAGGGCCAGGTGGGGTGGGAGACAATGGATATTGGGATTGAGG +
Preference number: 5 (lower is better)
Translates to: DESSSRIRAPWLWGK*RARWGGRQWILGLR
Trigger: CCTCAATCCCAATATCCATTGTCTCCCACCCCACCTGGCCCTCCACTTCCCCCACAACCATGGCGCACGAATCCGAGAGGAGCTCTCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS CCA 90 bp CTCTGGGCCCCAGGTGGGATCCGTGGGCACGGAGGACCCAGAATCTaGGGGGTTGCTATGCTCTGTGTCCATGACCTGAGGATTATTGTG +
Preference number: 5 (lower is better)
Translates to: LWAPGGIRGHGGPRI*GVAMLCVHDLRIIV
Trigger: CACAATAATCCTCAGGTCATGGACACAGAGCATAGCAACCCCCCAGATTCTGGGTCCTCCGTGCCCACGGATCCCACCTGGGGCCCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000541965.1
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS CCA 90 bp TCCTCTTCCTCCTCCTCAGACAACTCCTCTTCCGGTGATGGCTGCTaGGACTGCTGCTGGGGGAAACTCCGTGCCCCGGAGACTGTAGAT +
Preference number: 5 (lower is better)
Translates to: SSSSSSDNSSSGDGC*DCCWGKLRAPETVD
Trigger: ATCTACAGTCTCCGGGGCACGGAGTTTCCCCCAGCAGCAGTCCCAGCAGCCATCACCGGAAGAGGAGTTGTCTGAGGAGGAGGAAGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp GTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGGAGGCCGAAGAGTTGTaGGGGTTCTCCTGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: VTNYWSIFSTGTFWSRGREAEEL*GFSWPP
Trigger: TGGGGGCCAGGAGAACCCCAACAACTCTTCGGCCTC...CCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGCCACCAGAGGCTaGCGCTCAACCCCTCCACCT +
Preference number: 5 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGEATRG*RSTPPP
Trigger: AGGTGGAGGGGTTGAGCGCAAGCCTCTGGTGGCCTC...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp TGGCTTCCCTGGATCCCATTGTTGGAGGCACCTTCCCAGCCACAGTTCCTAGGCCTGGAGGTAATGGGGTaGCTCCCAGCTTGGGACTGG +
Preference number: 5 (lower is better)
Translates to: WLPWIPLLEAPSQPQFLGLEVMG*LPAWDW
Trigger: CCAGTCCCAAGCTGGGAGCAACCCCATTACCTCCAG...GCCTAGGAACTGTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS TCA 90 bp AGGAATGCCACATACTGGTTCTGTGGCAGCGACCAGGAAATGCCCTaGAGACTCCTCTCCTCTCCTCTCTGGGCCCCAGGTGGGATCCGT +
Preference number: 5 (lower is better)
Translates to: RNATYWFCGSDQEMP*RLLSSPLWAPGGIR
Trigger: ACGGATCCCACCTGGGGCCCAGAGAGGAGAGGAGAGGAGTCTTCAGGGCATTTCCTGGTCGCTGCCACAGAACCAGTATGTGGCATTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611430.4
ENST00000613414.4
CDS GCA 90 bp GGGCACCCACCGTCTGGCCTAAGGAGCCAAGCAACAGCACCTGCCTaGAGATTTGCTCAGTCATCTGCATCTGATGGATCTGCCGCTGCT +
Preference number: 5 (lower is better)
Translates to: GHPPSGLRSQATAPA*RFAQSSASDGSAAA
Trigger: AGCAGCGGCAGATCCATCAGATGCAGATGACTGAGCAAATCTGCAGGCAGGTGCTGTTGCTTGGCTCCTTAGGCCAGACGGTGGGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS CCA 90 bp CGTAGGGCCCGAGGACAGCTAAGCACTCGGAGACAGATGACACACTaGTTAGGTCCAGAAGAGGCTGAGGATGAAGGTGCAGGGGCAGAG +
Preference number: 5 (lower is better)
Translates to: RRARGQLSTRRQMTH*LGPEEAEDEGAGAE
Trigger: CTCTGCCCCTGCACCTTCATCCTCAGCCTCTTCTGGACCTAACCAGTGTGTCATCTGTCTCCGAGTGCTTAGCTGTCCTCGGGCCCTACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS CCA 90 bp GATGCTGTGACCCCAGTGGGTGGTAAAGGTGGAAGAAGGCCTGCTTaGGCGTTTCTGCCCCTGAAGAGGAAGAGGAGGAGGAGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: DAVTPVGGKGGRRPA*AFLPLKRKRRRRRK
Trigger: CTTCCTCCTCCTCCTCCTCTTCCTCTTCAGGGGCAGAAACGCCCAAGCAGGCCTTCTTCCACCTTTACCACCCACTGGGGTCACAGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CAA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGATTCGTGCGCCATGGTaGTGGGGGAAGTGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: VGSPITGASSVPAPSGAGIRAPW*WGKWRA
Trigger: GGCCCTCCACTTCCCCCACAACCATGGCGCACGAAT...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS-3UTR CAA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGAGGCCGAAGAGTTGTaGGGGTTCTCCTGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: VGSPITGASSVPAPSGAGEAEEL*GFSWPP
Trigger: TGGGGGCCAGGAGAACCCCAACAACTCTTCGGCCTC...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp CACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAAGAGGCCGAAGAGTTGTaGGGGTTCTCCTGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: HQLLEHLQYRHLLEQGEEEAEEL*GFSWPP
Trigger: TGGGGGCCAGGAGAACCCCAACAACTCTTCGGCCTC...TTCCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp GGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGAGGAGGCCGAAGAGTaGTTGGGGTTCTCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: GLGHQLLEHLQYRHLLEQEEAEE*LGFSWP
Trigger: GGGCCAGGAGAACCCCAACAACTCTTCGGCCTCCTC...CTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGAGGAGGCCGAAGAGTaGTTGGGGTTCTCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: VGSPITGASSVPAPSGAGEEAEE*LGFSWP
Trigger: GGGCCAGGAGAACCCCAACAACTCTTCGGCCTCCTC...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGAGGCCACCAGAGGCTaGCGCTCAACCCCTCCACCT +
Preference number: 5 (lower is better)
Translates to: RVGSPITGASSVPAPSGAEATRG*RSTPPP
Trigger: AGGTGGAGGGGTTGAGCGCAAGCCTCTGGTGGCCTC...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp GTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGGCAGCTGGACTGGCCTaGTGGCCCACGAAATGTGCA +
Preference number: 5 (lower is better)
Translates to: VTNYWSIFSTGTFWSRGRAAGLA*WPTKCA
Trigger: TGCACATTTCGTGGGCCACAAGGCCAGTCCAGCTGC...CCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp GTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAGGGGTAGTAGGGGCTaGGTGGAAGAGGCAGTCCCT +
Preference number: 5 (lower is better)
Translates to: VTNYWSIFSTGTFWSRGRRGSRG*VEEAVP
Trigger: AGGGACTGCCTCTTCCACCAAGCCCCTACTACCCCT...CCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS GCA 90 bp CACAAACTTATTGAAAGCAGGGAGTCCTGGAGCCGTGGCTGTGCCTaGACTGGTGGAGAGCAGAGTCAGGCTCTCTGTGGCACTGAGTGC +
Preference number: 5 (lower is better)
Translates to: HKLIESRESWSRGCA*TGGEQSQALCGTEC
Trigger: GCACTCAGTGCCACAGAGAGCCTGACTCTGCTCTCCACCAGTGCAGGCACAGCCACGGCTCCAGGACTCCCTGCTTTCAATAAGTTTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGCACTTGGCACAGACTaGGGGGTGATCCTCCTCGCT +
Preference number: 5 (lower is better)
Translates to: VGSPITGASSVPAPSGAGALGTD*GVILLA
Trigger: AGCGAGGAGGATCACCCCCAAGTCTGTGCCAAGTGC...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp GGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGTAGTCCCGTGGTGCTaGGGAATGCCAGATGAGGCG +
Preference number: 5 (lower is better)
Translates to: GLGHQLLEHLQYRHLLEQVVPWC*GMPDEA
Trigger: CGCCTCATCTGGCATTCCCAAGCACCACGGGACTAC...CTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp GTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGCCCGGAGACTGTAGATaGCTCGGAGCCATTCTCCTG +
Preference number: 5 (lower is better)
Translates to: VTNYWSIFSTGTFWSRGRPGDCR*LGAILL
Trigger: CAGGAGAATGGCTCCGAGCAATCTACAGTCTCCGGG...CCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp TGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGCTGGCTCCTTTCTCATaGCCTCCTGCAGGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: WVTNYWSIFSTGTFWSRGLAPFS*PPAGSA
Trigger: AGCTGAGCCTGCAGGAGGCAATGAGAAAGGAGCCAG...CCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp CCTTGGCTTCCCTGGATCCCATTGTTGGAGGCACCTTCCCAGCCACAGTTCCTATGGAAGAAGGCCTGCTaGGGCGTTTCTGCCCCTGAA +
Preference number: 5 (lower is better)
Translates to: PWLPWIPLLEAPSQPQFLWKKAC*GVSAPE
Trigger: TTCAGGGGCAGAAACGCCCAAGCAGGCCTTCTTCCA...TAGGAACTGTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAGCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CAA 90 bp TGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGTGGAAGAAGGCCTGCTaGGGCGTTTCTGCCCCTGAA +
Preference number: 5 (lower is better)
Translates to: WVTNYWSIFSTGTFWSRGWKKAC*GVSAPE
Trigger: TTCAGGGGCAGAAACGCCCAAGCAGGCCTTCTTCCA...CCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CAA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGGTCTCGTCTCCCCCTaGGGTCCGAAGCCAATTGAT +
Preference number: 5 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGEGLVSP*GPKPID
Trigger: ATCAATTGGCTTCGGACCCAAGGGGGAGACGAGACC...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000614342.1
CDS GCA 90 bp ACATGCGTTCTGGTGGGCGAGGAATTCAGTTGGGTCAGTGAATTGTaGGCAGCACTTGGCACAGACTTGGGGGTGATCCTCCTCGCTAGC +
Preference number: 5 (lower is better)
Translates to: TCVLVGEEFSWVSEL*AALGTDLGVILLAS
Trigger: GCTAGCGAGGAGGATCACCCCCAAGTCTGTGCCAAGTGCTGCGCACAATTCACTGACCCAACTGAATTCCTCGCCCACCAGAACGCATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000541965.1
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS CCA 90 bp TATTGTGACCCTCAGGCCGGGGTTCAGAGGAGGCCGAAGAGTTGTTaGGGTTCTCCTGGCCCCCAATTATCACCATTACAGGAGGGTCAG +
Preference number: 5 (lower is better)
Translates to: YCDPQAGVQRRPKSC*GSPGPQLSPLQEGQ
Trigger: CTGACCCTCCTGTAATGGTGATAATTGGGGGCCAGGAGAACCCCAACAACTCTTCGGCCTCCTCTGAACCCCGGCCTGAGGGTCACAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000541965.1
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGCACTTGGCACAGACTaGGGGGTGATCCTCCTCGCT +
Preference number: 5 (lower is better)
Translates to: RVGSPITGASSVPAPSGAALGTD*GVILLA
Trigger: AGCGAGGAGGATCACCCCCAAGTCTGTGCCAAGTGC...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCATGGAAGAAGGCCTGCTaGGGCGTTTCTGCCCCTGTG +
Preference number: 5 (lower is better)
Translates to: RVGSPITGASSVPAPSGAWKKAC*GVSAPV
Trigger: CACAGGGGCAGAAACGCCCAAGCAGGCCTTCTTCCA...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450879.2
ENST00000546363.5
CDS-3UTR CAA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGTAGTCCCGTGGTGCTaGGGAATGCCAGATGAGGCG +
Preference number: 5 (lower is better)
Translates to: RVGSPITGASSVPAPSGAVVPWC*GMPDEA
Trigger: CGCCTCATCTGGCATTCCCAAGCACCACGGGACTAC...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp CACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAACACCACTTCCATTCTTaGGCTTCAGGAGCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: HQLLEHLQYRHLLEQGEEHHFHS*ASGALG
Trigger: CCCCAGGGCTCCTGAAGCCAAAGAATGGAAGTGGTG...TTCCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGCGGTGGAAATGCACTTaGAGGTTGCCACGGGTGGTA +
Preference number: 5 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGERWKCT*RLPRVV
Trigger: TACCACCCGTGGCAACCTCAAAGTGCATTTCCACCG...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp GGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGCCAGTTGCTGCAGCTTaGATGTCTCAGAGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: GHQLLEHLQYRHLLEQGEPVAAA*MSQRVR
Trigger: CCTCACCCTCTGAGACATCAAAGCTGCAGCAACTGG...CTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGCTGGCTCCTTTCTCATaGCCTCCTGCAGGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: VGSPITGASSVPAPSGAGLAPFS*PPAGSA
Trigger: AGCTGAGCCTGCAGGAGGCAATGAGAAAGGAGCCAG...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGCTGGTTTGGACAGGCTaGATGGGGCTGAAGAGGGGT +
Preference number: 5 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGLVWTG*MGLKRG
Trigger: ACCCCTCTTCAGCCCCATCAAGCCTGTCCAAACCAG...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS TCA 90 bp AGTGGAGGTGGAGCTGGAATTCCAGGGCTTCATGGGCAGGCCATTTaGCAGGAATGCCACATACTGGTTCTGGTGGTGTGCCAGGAGCAT +
Preference number: 5 (lower is better)
Translates to: SGGGAGIPGLHGQAI*QECHILVLVVCQEH
Trigger: ATGCTCCTGGCACACCACCAGAACCAGTATGTGGCATTCCTGTCAAATGGCCTGCCCATGAAGCCCTGGAATTCCAGCTCCACCTCCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450879.2
ENST00000546363.5
CDS TCA 90 bp CCAAGCAACAGCACCTGCCTGCAGATTTGCTCAGTCATCTGCATCTaGTGGATCTGCCGCTGCTGCAGCACCCGTAGCTCTTCCAAGATC +
Preference number: 5 (lower is better)
Translates to: PSNSTCLQICSVICI*WICRCCSTRSSSKI
Trigger: GATCTTGGAAGAGCTACGGGTGCTGCAGCAGCGGCAGATCCATCAGATGCAGATGACTGAGCAAATCTGCAGGCAGGTGCTGTTGCTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS CCA 90 bp AGGAGGGTCAGTAGAACATGCGTTCTGGTGGGCGAGGAATTCAGTTaGGTCAGTGAATTGTGCGCAGCACTTGGCACAGACTTGGGGGTG +
Preference number: 5 (lower is better)
Translates to: RRVSRTCVLVGEEFS*VSELCAALGTDLGV
Trigger: CACCCCCAAGTCTGTGCCAAGTGCTGCGCACAATTCACTGACCCAACTGAATTCCTCGCCCACCAGAACGCATGTTCTACTGACCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000541965.1
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGCAATGGATATTGGGATaGAGGGAGGCGATGGCCGCT +
Preference number: 5 (lower is better)
Translates to: VGSPITGASSVPAPSGAGQWILG*REAMAA
Trigger: AGCGGCCATCGCCTCCCTCAATCCCAATATCCATTG...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS-3UTR CAA 90 bp GGGGGCCATCCCCTTGTAAGCACAGTAATTTCCAAGCTCAGGGACTACAGAAAAATTCGTGCGCCATGGTaGTGGGGGAAGTGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: GGHPLVSTVISKLRDYRKIRAPW*WGKWRA
Trigger: GGCCCTCCACTTCCCCCACAACCATGGCGCACGAAT...TTTTCTGTAGTCCCTGAGCTTGGAAATTACTGTGCTTACAAGGGGATGGCCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000537235.2
CDS-3UTR CAA 90 bp AGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATTCGTGCGCCATGGTaGTGGGGGAAGTGGAGGGCC +
Preference number: 5 (lower is better)
Translates to: SWRGLGTLTSQNLYLNVTIRAPW*WGKWRA
Trigger: GGCCCTCCACTTCCCCCACAACCATGGCGCACGAAT...GGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS-3UTR CAA 90 bp CTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGCACTTGGCACAGACTaGGGGGTGATCCTCCTCGCT +
Preference number: 5 (lower is better)
Translates to: LPRVGSPITGASSVPAPSALGTD*GVILLA
Trigger: AGCGAGGAGGATCACCCCCAAGTCTGTGCCAAGTGC...AGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp GAGGTCATCATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAAGAGGCCGAAGAGTTGTaGGGGTTCTCCTGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: EVIMNEKLERSWHTDQPKEAEEL*GFSWPP
Trigger: TGGGGGCCAGGAGAACCCCAACAACTCTTCGGCCTC...TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCATGATGACCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCACACCACTTCCATTCTTaGGCTTCAGGAGCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: RVGSPITGASSVPAPSGAHHFHS*ASGALG
Trigger: CCCCAGGGCTCCTGAAGCCAAAGAATGGAAGTGGTG...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp TGGCTTCCCTGGATCCCATTGTTGGAGGCACCTTCCCAGCCACAGTTCCTAGGCAAATGCACTTTGAGGTaGCCACGGGTGGTAAAACGG +
Preference number: 5 (lower is better)
Translates to: WLPWIPLLEAPSQPQFLGKCTLR*PRVVKR
Trigger: CCGTTTTACCACCCGTGGCAACCTCAAAGTGCATTT...GCCTAGGAACTGTGGCTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CAA 90 bp CACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAACGGTGGAAATGCACTTaGAGGTTGCCACGGGTGGTA +
Preference number: 5 (lower is better)
Translates to: HQLLEHLQYRHLLEQGEERWKCT*RLPRVV
Trigger: TACCACCCGTGGCAACCTCAAAGTGCATTTCCACCG...TTCCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGCGGTGGAAATGCACTTaGAGGTTGCCACGGGTGGTA +
Preference number: 5 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGRWKCT*RLPRVV
Trigger: TACCACCCGTGGCAACCTCAAAGTGCATTTCCACCG...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp GTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGGTGGACTTGAAGTGGTaGGTAAGCAGTGCCCAGCTT +
Preference number: 5 (lower is better)
Translates to: VTNYWSIFSTGTFWSRGRVDLKW*VSSAQL
Trigger: AAGCTGGGCACTGCTTACCAACCACTTCAAGTCCAC...CCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp TGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAGCATATGCTTCTaGAGGGTAGCCCGCTCAAGA +
Preference number: 5 (lower is better)
Translates to: WVTNYWSIFSTGTFWSRGRSICF*RVARSR
Trigger: TCTTGAGCGGGCTACCCTCAAGAAGCATATGCTCCT...CCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCACTTCCCTGGATCCCATaGTTGGAGGCACCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: RVGSPITGASSVPAPSGALPWIP*LEAPSQ
Trigger: CTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAG...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp GGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGAGCTGCCAGCCCTTTTaGGCTAGGCTGCAATGCCAA +
Preference number: 5 (lower is better)
Translates to: GLGHQLLEHLQYRHLLEQSCQPF*ARLQCQ
Trigger: TTGGCATTGCAGCCTAGCCAAAAAGGGCTGGCAGCT...CTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CAA 90 bp AGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCTGGGTCCGAAGCCAATaGATGCCTCTCCCCCAGCGC +
Preference number: 5 (lower is better)
Translates to: SWRGLGTLTSQNLYLNVTWVRSQ*MPLPQR
Trigger: GCGCTGGGGGAGAGGCATCAATTGGCTTCGGACCCA...GGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000614342.1
CDS TCA 90 bp AGTGGAGGTGGAGCTGGAATTCCAGGGCTTCATGGGCAGGCCATTTaGCAGGAATGCCACATACTGGTTCTGTGGCAGCGACCAGGAAAT +
Preference number: 5 (lower is better)
Translates to: SGGGAGIPGLHGQAI*QECHILVLWQRPGN
Trigger: ATTTCCTGGTCGCTGCCACAGAACCAGTATGTGGCATTCCTGTCAAATGGCCTGCCCATGAAGCCCTGGAATTCCAGCTCCACCTCCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611430.4
ENST00000613414.4
CDS-3UTR CAA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGGAGACAATGGATATaGGGATTGAGGGAGGCGATG +
Preference number: 5 (lower is better)
Translates to: VGSPITGASSVPAPSGAGGRQWI*GLREAM
Trigger: CATCGCCTCCCTCAATCCCAATATCCATTGTCTCCC...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS-3UTR CAA 90 bp AGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGAGGAGGCCGAAGAGTaGTTGGGGTTCTCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: RGLGTLTSQNLYLNVTIREEAEE*LGFSWP
Trigger: GGGCCAGGAGAACCCCAACAACTCTTCGGCCTCCTC...CCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp CCCCTTGTAAGCACAGTAATTTCCAAGCTCAGGGACTACAGAAAAGCCACTAGGGAGGAGGCCGAAGAGTaGTTGGGGTTCTCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: PLVSTVISKLRDYRKATREEAEE*LGFSWP
Trigger: GGGCCAGGAGAACCCCAACAACTCTTCGGCCTCCTC...CCTAGTGGCTTTTCTGTAGTCCCTGAGCTTGGAAATTACTGTGCTTACAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CAA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTAGAGGCCACCAGAGGCTaGCGCTCAACCCCTCCACCT +
Preference number: 5 (lower is better)
Translates to: HFSLLPRVGSPITGASSVEATRG*RSTPPP
Trigger: AGGTGGAGGGGTTGAGCGCAAGCCTCTGGTGGCCTC...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp GTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAAGCTGCCAGTGGACTaGAAGTGGTTGGTAAGCAGT +
Preference number: 5 (lower is better)
Translates to: VTNYWSIFSTGTFWSRGRKLPVD*KWLVSS
Trigger: ACTGCTTACCAACCACTTCAAGTCCACTGGCAGCTT...CCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGCCCGGAGACTGTAGATaGCTCGGAGCCATTCTCCTG +
Preference number: 5 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLPGDCR*LGAILL
Trigger: CAGGAGAATGGCTCCGAGCAATCTACAGTCTCCGGG...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGTGCTGATGCCGGACTaGAGCTTCTCTCCGGTTTGC +
Preference number: 5 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLVLMPD*SFSPVC
Trigger: GCAAACCGGAGAGAAGCTCAAGTCCGGCATCAGCAC...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp GGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGAGGAGCATATGCTTCTaGAGGGTAGCCCGCTCAAGA +
Preference number: 5 (lower is better)
Translates to: GLGHQLLEHLQYRHLLEQRSICF*RVARSR
Trigger: TCTTGAGCGGGCTACCCTCAAGAAGCATATGCTCCT...CTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp GTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGTCATGGGCAGGCCATTaGACAGGAATGCCACATACT +
Preference number: 5 (lower is better)
Translates to: VTNYWSIFSTGTFWSRGRSWAGH*TGMPHT
Trigger: AGTATGTGGCATTCCTGTCAAATGGCCTGCCCATGA...CCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp TCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACTTCCCTGGATCCCATaGTTGGAGGCACCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: SLLPRVGSPITGASSVPALPWIP*LEAPSQ
Trigger: CTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAG...TGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp GGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGCCCTACTTCCTAGGGTaGGGTCACCAATTACTGGAG +
Preference number: 5 (lower is better)
Translates to: GLGHQLLEHLQYRHLLEQPYFLG*GHQLLE
Trigger: CTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGG...CTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGCCCTACTTCCTAGGGTaGGGTCACCAATTACTGGAG +
Preference number: 5 (lower is better)
Translates to: VGSPITGASSVPAPSGAGPYFLG*GHQLLE
Trigger: CTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGG...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp TGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGCTCCTGGGAGACCTCTaGGCAAGAAATCAGCTTGTT +
Preference number: 5 (lower is better)
Translates to: WVTNYWSIFSTGTFWSRGLLGDL*ARNQLV
Trigger: AACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGAG...CCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp AGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCCTGGAGGTAATGGGGTaGCTCCCAGCTTGGGACTGG +
Preference number: 5 (lower is better)
Translates to: SWRGLGTLTSQNLYLNVTLEVMG*LPAWDW
Trigger: CCAGTCCCAAGCTGGGAGCAACCCCATTACCTCCAG...GGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CAA 90 bp GGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGTGGAGAGGGTTCCCCTaGAGAAAGCTGCAGAGAATC +
Preference number: 5 (lower is better)
Translates to: GLGHQLLEHLQYRHLLEQWRGFP*RKLQRI
Trigger: GATTCTCTGCAGCTTTCTCAAGGGGAACCCTCTCCA...CTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CAA 90 bp TCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACAATGGATATTGGGATaGAGGGAGGCGATGGCCGCT +
Preference number: 5 (lower is better)
Translates to: SLLPRVGSPITGASSVPAQWILG*REAMAA
Trigger: AGCGGCCATCGCCTCCCTCAATCCCAATATCCATTG...TGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS-3UTR CAA 90 bp GGAGCTGGTCTCCCAAAGTCTGGGACTCTTAAGAACCAGACAATGACAAAGACAGCACTTGGCACAGACTaGGGGGTGATCCTCCTCGCT +
Preference number: 5 (lower is better)
Translates to: GAGLPKSGTLKNQTMTKTALGTD*GVILLA
Trigger: AGCGAGGAGGATCACCCCCAAGTCTGTGCCAAGTGC...TGTCTTTGTCATTGTCTGGTTCTTAAGAGTCCCAGACTTTGGGAGACCAGCTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTAGAGGCCGAAGAGTTGTaGGGGTTCTCCTGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: HFSLLPRVGSPITGASSVEAEEL*GFSWPP
Trigger: TGGGGGCCAGGAGAACCCCAACAACTCTTCGGCCTC...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGGAGGCCGAAGAGTTGTaGGGGTTCTCCTGGCCCCCA +
Preference number: 5 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQEAEEL*GFSWPP
Trigger: TGGGGGCCAGGAGAACCCCAACAACTCTTCGGCCTC...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCGTAGTCCCGTGGTGCTaGGGAATGCCAGATGAGGCG +
Preference number: 5 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTIVVPWC*GMPDEA
Trigger: CGCCTCATCTGGCATTCCCAAGCACCACGGGACTAC...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp GGGGGCCATCCCCTTGTAAGCACAGTAATTTCCAAGCTCAGGGACTACAGAAAACACCACTTCCATTCTTaGGCTTCAGGAGCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: GGHPLVSTVISKLRDYRKHHFHS*ASGALG
Trigger: CCCCAGGGCTCCTGAAGCCAAAGAATGGAAGTGGTG...TTTTCTGTAGTCCCTGAGCTTGGAAATTACTGTGCTTACAAGGGGATGGCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CAA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGAAATGCACTTTGAGGTaGCCACGGGTGGTAAAACGG +
Preference number: 5 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGKCTLR*PRVVKR
Trigger: CCGTTTTACCACCCGTGGCAACCTCAAAGTGCATTT...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGTGGACTTGAAGTGGTaGGTAAGCAGTGCCCAGCTT +
Preference number: 5 (lower is better)
Translates to: RVGSPITGASSVPAPSGAVDLKW*VSSAQL
Trigger: AAGCTGGGCACTGCTTACCAACCACTTCAAGTCCAC...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp TCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACACCGCCACAGCTCCTaGCCGGTCAATCTTTTCTAC +
Preference number: 5 (lower is better)
Translates to: SLLPRVGSPITGASSVPAHRHSS*PVNLFY
Trigger: GTAGAAAAGATTGACCGGCAAGGAGCTGTGGCGGTG...TGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp GGAGCTGGTCTCCCAAAGTCTGGGACTCTTAAGAACCAGACAATGACAAAGACAGCAGCTGGACTGGCCTaGTGGCCCACGAAATGTGCA +
Preference number: 5 (lower is better)
Translates to: GAGLPKSGTLKNQTMTKTAAGLA*WPTKCA
Trigger: TGCACATTTCGTGGGCCACAAGGCCAGTCCAGCTGC...TGTCTTTGTCATTGTCTGGTTCTTAAGAGTCCCAGACTTTGGGAGACCAGCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CAA 90 bp ATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTGCAGCTGGACTGGCCTaGTGGCCCACGAAATGTGCA +
Preference number: 5 (lower is better)
Translates to: MNEKLERSWHTDQPKPLPAAGLA*WPTKCA
Trigger: TGCACATTTCGTGGGCCACAAGGCCAGTCCAGCTGC...AGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp AGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCGTGCTGATGCCGGACTaGAGCTTCTCTCCGGTTTGC +
Preference number: 5 (lower is better)
Translates to: SWRGLGTLTSQNLYLNVTVLMPD*SFSPVC
Trigger: GCAAACCGGAGAGAAGCTCAAGTCCGGCATCAGCAC...GGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp CACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAATCATGGGCAGGCCATTaGACAGGAATGCCACATACT +
Preference number: 5 (lower is better)
Translates to: HQLLEHLQYRHLLEQGEESWAGH*TGMPHT
Trigger: AGTATGTGGCATTCCTGTCAAATGGCCTGCCCATGA...TTCCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp AGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCCTTCCCTGGATCCCATaGTTGGAGGCACCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: SWRGLGTLTSQNLYLNVTLPWIP*LEAPSQ
Trigger: CTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAG...GGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCACCCTACTTCCTAGGGTaGGGTCACCAATTACTGGAG +
Preference number: 5 (lower is better)
Translates to: RVGSPITGASSVPAPSGAPYFLG*GHQLLE
Trigger: CTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGG...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp GGAGCTGGTCTCCCAAAGTCTGGGACTCTTAAGAACCAGACAATGACAAAGACAAGGGGTAGTAGGGGCTaGGTGGAAGAGGCAGTCCCT +
Preference number: 5 (lower is better)
Translates to: GAGLPKSGTLKNQTMTKTRGSRG*VEEAVP
Trigger: AGGGACTGCCTCTTCCACCAAGCCCCTACTACCCCT...TGTCTTTGTCATTGTCTGGTTCTTAAGAGTCCCAGACTTTGGGAGACCAGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CAA 90 bp AAAATCAGGGCTCATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTTCCCGGGTAGAGAGTaGGGAGAGGGAGGGGCAACG +
Preference number: 5 (lower is better)
Translates to: KIRAHNSGRSFCEAVSALFPGRE*GEGGAT
Trigger: CGTTGCCCCTCCCTCTCCCAACTCTCTACCCGGGAA...CAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTATGAGCCCTGATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000614342.1
CDS TCA 90 bp TGGGTCCGAAGCCAATTGATGCCTCTCCCCCAGCGCAAATCACTGTaGAGCAGAGATGTTCTTCTTTCCCAGAGACACAGACTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: WVRSQLMPLPQRKSL*SRDVLLSQRHRLSL
Trigger: GAGAGAGAGTCTGTGTCTCTGGGAAAGAAGAACATCTCTGCTTCACAGTGATTTGCGCTGGGGGAGAGGCATCAATTGGCTTCGGACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541965.1
ENST00000614342.1
CDS GCA 90 bp CTCCTGGCCCCCAATTATCACCATTACAGGAGGGTCAGTAGAACATaGGTTCTGGTGGGCGAGGAATTCAGTTGGGTCAGTGAATTGTGC +
Preference number: 5 (lower is better)
Translates to: LLAPNYHHYRRVSRT*VLVGEEFSWVSELC
Trigger: GCACAATTCACTGACCCAACTGAATTCCTCGCCCACCAGAACGCATGTTCTACTGACCCTCCTGTAATGGTGATAATTGGGGGCCAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000541965.1
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS CCA 90 bp CCCCCAATTATCACCATTACAGGAGGGTCAGTAGAACATGCGTTCTaGTGGGCGAGGAATTCAGTTGGGTCAGTGAATTGTGCGCAGCAC +
Preference number: 5 (lower is better)
Translates to: PPIITITGGSVEHAF*WARNSVGSVNCAQH
Trigger: GTGCTGCGCACAATTCACTGACCCAACTGAATTCCTCGCCCACCAGAACGCATGTTCTACTGACCCTCCTGTAATGGTGATAATTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000541965.1
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS CCA 90 bp TCCCTGCTCCATTGGCTGAGGCTGATCCAGGCTGTCAGGTGGTGGTaGTGGTGGCAAAGAAGACTGTTGAGTAGTTTTCTCATTACTGTC +
Preference number: 5 (lower is better)
Translates to: SLLHWLRLIQAVRWW*WWQRRLLSSFLITV
Trigger: GACAGTAATGAGAAAACTACTCAACAGTCTTCTTTGCCACCACCACCACCACCTGACAGCCTGGATCAGCCTCAGCCAATGGAGCAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS CCA 90 bp ACTGCTTCCCTGCTCCATTGGCTGAGGCTGATCCAGGCTGTCAGGTaGTGGTGGTGGTGGCAAAGAAGACTGTTGAGTAGTTTTCTCATT +
Preference number: 5 (lower is better)
Translates to: TASLLHWLRLIQAVR*WWWWQRRLLSSFLI
Trigger: AATGAGAAAACTACTCAACAGTCTTCTTTGCCACCACCACCACCACCTGACAGCCTGGATCAGCCTCAGCCAATGGAGCAGGGAAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp TCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCAGGGAGACAATGGATATaGGGATTGAGGGAGGCGATG +
Preference number: 5 (lower is better)
Translates to: SLLPRVGSPITGASSVPAGRQWI*GLREAM
Trigger: CATCGCCTCCCTCAATCCCAATATCCATTGTCTCCC...TGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS-3UTR CAA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTAGCACTTGGCACAGACTaGGGGGTGATCCTCCTCGCT +
Preference number: 5 (lower is better)
Translates to: HFSLLPRVGSPITGASSVALGTD*GVILLA
Trigger: AGCGAGGAGGATCACCCCCAAGTCTGTGCCAAGTGC...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp CTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTAGTTGGGTCAGTGAATaGTGCGCAGCACTTGGCACA +
Preference number: 5 (lower is better)
Translates to: LPRVGSPITGASSVPAPSSWVSE*CAALGT
Trigger: TGTGCCAAGTGCTGCGCACAATTCACTGACCCAACT...AGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTAGTAGTCCCGTGGTGCTaGGGAATGCCAGATGAGGCG +
Preference number: 5 (lower is better)
Translates to: HFSLLPRVGSPITGASSVVVPWC*GMPDEA
Trigger: CGCCTCATCTGGCATTCCCAAGCACCACGGGACTAC...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCATTAGTTGCATGCGAGTaGCCGTGCTACTTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: RVGSPITGASSVPAPSGALVACE*PCYFLP
Trigger: TGGCAGAAAGTAGCACGGCAACTCGCATGCAACTAA...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp TCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCAGTGGACTTGAAGTGGTaGGTAAGCAGTGCCCAGCTT +
Preference number: 5 (lower is better)
Translates to: SLLPRVGSPITGASSVPAVDLKW*VSSAQL
Trigger: AAGCTGGGCACTGCTTACCAACCACTTCAAGTCCAC...TGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp GAGGTCATCATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACACCGCCACAGCTCCTaGCCGGTCAATCTTTTCTAC +
Preference number: 5 (lower is better)
Translates to: EVIMNEKLERSWHTDQPKHRHSS*PVNLFY
Trigger: GTAGAAAAGATTGACCGGCAAGGAGCTGTGGCGGTG...TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCATGATGACCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp GGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGATTTACTGCAGCTGGACTGGCCTaGTGGCCCACGAAATGTGCA +
Preference number: 5 (lower is better)
Translates to: GTLTSQNLYLNVTIRGFTAAGLA*WPTKCA
Trigger: TGCACATTTCGTGGGCCACAAGGCCAGTCCAGCTGC...AGTAAATCCCCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCACTCCTGGGAGACCTCTaGGCAAGAAATCAGCTTGTT +
Preference number: 5 (lower is better)
Translates to: RVGSPITGASSVPAPSGALLGDL*ARNQLV
Trigger: AACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGAG...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGAGGGGCAACGCTCACTaGGTCTTAACCGGGGTGACC +
Preference number: 5 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQRGNAH*VLTGVT
Trigger: GGTCACCCCGGTTAAGACCAAGTGAGCGTTGCCCCT...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614342.1
CDS GCA 90 bp GTAAGCAGTGCCCAGCTTGGTAGTGAAGTCACCAACTTACTTAGTTaGATGCGAGTTGCCGTGCTACTTTCTGCCACTCCACTGATGGCT +
Preference number: 5 (lower is better)
Translates to: VSSAQLGSEVTNLLS*MRVAVLLSATPLMA
Trigger: AGCCATCAGTGGAGTGGCAGAAAGTAGCACGGCAACTCGCATGCAACTAAGTAAGTTGGTGACTTCACTACCAAGCTGGGCACTGCTTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS CCA 90 bp CTCCATTGGCTGAGGCTGATCCAGGCTGTCAGGTGGTGGTGGTGGTaGCAAAGAAGACTGTTGAGTAGTTTTCTCATTACTGTCCATCTC +
Preference number: 5 (lower is better)
Translates to: LHWLRLIQAVRWWWW*QRRLLSSFLITVHL
Trigger: GAGATGGACAGTAATGAGAAAACTACTCAACAGTCTTCTTTGCCACCACCACCACCACCTGACAGCCTGGATCAGCCTCAGCCAATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS CCA 90 bp CTGCTCCATTGGCTGAGGCTGATCCAGGCTGTCAGGTGGTGGTGGTaGTGGCAAAGAAGACTGTTGAGTAGTTTTCTCATTACTGTCCAT +
Preference number: 5 (lower is better)
Translates to: LLHWLRLIQAVRWWW*WQRRLLSSFLITVH
Trigger: ATGGACAGTAATGAGAAAACTACTCAACAGTCTTCTTTGCCACCACCACCACCACCTGACAGCCTGGATCAGCCTCAGCCAATGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGTTAGTTGCATGCGAGTaGCCGTGCTACTTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLLVACE*PCYFLP
Trigger: TGGCAGAAAGTAGCACGGCAACTCGCATGCAACTAA...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCCCAGTTGCTGCAGCTTaGATGTCTCAGAGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTIPVAAA*MSQRVR
Trigger: CCTCACCCTCTGAGACATCAAAGCTGCAGCAACTGG...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp TCCTGGGAGACCTCTTGGCAAGAAATCAGCTTGTTTCCCAACTTTGAGAGGTCACACCGCCACAGCTCCTaGCCGGTCAATCTTTTCTAC +
Preference number: 5 (lower is better)
Translates to: SWETSWQEISLFPNFERSHRHSS*PVNLFY
Trigger: GTAGAAAAGATTGACCGGCAAGGAGCTGTGGCGGTG...TGACCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp GGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGATTTACTCCCGGAGACTGTAGATaGCTCGGAGCCATTCTCCTG +
Preference number: 5 (lower is better)
Translates to: GTLTSQNLYLNVTIRGFTPGDCR*LGAILL
Trigger: CAGGAGAATGGCTCCGAGCAATCTACAGTCTCCGGG...AGTAAATCCCCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTAGTGCTGATGCCGGACTaGAGCTTCTCTCCGGTTTGC +
Preference number: 5 (lower is better)
Translates to: HFSLLPRVGSPITGASSVVLMPD*SFSPVC
Trigger: GCAAACCGGAGAGAAGCTCAAGTCCGGCATCAGCAC...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp AAAATCAGGGCTCATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGCTGGCTCCTTTCTCATaGCCTCCTGCAGGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: KIRAHNSGRSFCEAVSALLAPFS*PPAGSA
Trigger: AGCTGAGCCTGCAGGAGGCAATGAGAAAGGAGCCAG...CAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTATGAGCCCTGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CAA 90 bp AAAATCAGGGCTCATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGCTTCCCTGGATCCCATaGTTGGAGGCACCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: KIRAHNSGRSFCEAVSALLPWIP*LEAPSQ
Trigger: CTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAG...CAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTATGAGCCCTGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CAA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGCTTCCCTGGATCCCATaGTTGGAGGCACCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQLPWIP*LEAPSQ
Trigger: CTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAG...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp TGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGACAGTTTGCTACTTCTaGTCTATGATGGGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: WVTNYWSIFSTGTFWSRGTVCYF*SMMGFS
Trigger: TGAGAAGCCCATCATAGACAAGAAGTAGCAAACTGT...CCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp GTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGTGGCAAGAAATCAGCTaGTTTCCCAACTTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: VGSPITGASSVPAPSGAGWQEIS*FPNFER
Trigger: CCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCA...CCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp TTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGTGGCAAGAAATCAGCTaGTTTCCCAACTTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: LGHQLLEHLQYRHLLEQGWQEIS*FPNFER
Trigger: CCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCA...CCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGCTCCTGGGAGACCTCTaGGCAAGAAATCAGCTTGTT +
Preference number: 5 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLLLGDL*ARNQLV
Trigger: AACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGAG...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGCTGGTTTGGACAGGCTaGATGGGGCTGAAGAGGGGT +
Preference number: 5 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQLVWTG*MGLKRG
Trigger: ACCCCTCTTCAGCCCCATCAAGCCTGTCCAAACCAG...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CAA 90 bp ATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTGGGACAAAGAGCAGCTGCCAGCCCTTTTaGGCTAGGCTGCAATGCCAA +
Preference number: 5 (lower is better)
Translates to: ITLGGPFVKLFLLCGTKSSCQPF*ARLQCQ
Trigger: TTGGCATTGCAGCCTAGCCAAAAAGGGCTGGCAGCT...GCTCTTTGTCCCACAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS CCA 90 bp CCAATTATCACCATTACAGGAGGGTCAGTAGAACATGCGTTCTGGTaGGCGAGGAATTCAGTTGGGTCAGTGAATTGTGCGCAGCACTTG +
Preference number: 5 (lower is better)
Translates to: PIITITGGSVEHAFW*ARNSVGSVNCAQHL
Trigger: CAAGTGCTGCGCACAATTCACTGACCCAACTGAATTCCTCGCCCACCAGAACGCATGTTCTACTGACCCTCCTGTAATGGTGATAATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000541965.1
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS CCA 90 bp GCTCATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTaGGACAAAGAGCAGCAGGTACAGAAAAACAGGCTCATGGGATCG +
Preference number: 5 (lower is better)
Translates to: AHNSGRSFCEAVSAL*DKEQQVQKNRLMGS
Trigger: CGATCCCATGAGCCTGTTTTTCTGTACCTGCTGCTCTTTGTCCCACAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTATGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CAA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACAATGGATATTGGGATaGAGGGAGGCGATGGCCGCT +
Preference number: 5 (lower is better)
Translates to: HFSLLPRVGSPITGASSVQWILG*REAMAA
Trigger: AGCGGCCATCGCCTCCCTCAATCCCAATATCCATTG...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS-3UTR CAA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGTTGGGTCAGTGAATaGTGCGCAGCACTTGGCACA +
Preference number: 5 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTISWVSE*CAALGT
Trigger: TGTGCCAAGTGCTGCGCACAATTCACTGACCCAACT...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp AGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGAGTTGGGTCAGTGAATaGTGCGCAGCACTTGGCACA +
Preference number: 5 (lower is better)
Translates to: RGLGTLTSQNLYLNVTIRSWVSE*CAALGT
Trigger: TGTGCCAAGTGCTGCGCACAATTCACTGACCCAACT...CCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGCGGTGGAAATGCACTTaGAGGTTGCCACGGGTGGTA +
Preference number: 5 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQRWKCT*RLPRVV
Trigger: TACCACCCGTGGCAACCTCAAAGTGCATTTCCACCG...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp AGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAATGAGCACAAACTTATaGAAAGCAGGGAGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: RVGSPITGASSVPAPSGAMSTNL*KAGSPG
Trigger: TCCAGGACTCCCTGCTTTCAATAAGTTTGTGCTCAT...TGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGCCAGTTGCTGCAGCTTaGATGTCTCAGAGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQPVAAA*MSQRVR
Trigger: CCTCACCCTCTGAGACATCAAAGCTGCAGCAACTGG...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCAGTTGCTGCAGCTTaGATGTCTCAGAGGGTGAGG +
Preference number: 5 (lower is better)
Translates to: HFSLLPRVGSPITGASSVPVAAA*MSQRVR
Trigger: CCTCACCCTCTGAGACATCAAAGCTGCAGCAACTGG...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGCACCGCCACAGCTCCTaGCCGGTCAATCTTTTCTAC +
Preference number: 5 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQHRHSS*PVNLFY
Trigger: GTAGAAAAGATTGACCGGCAAGGAGCTGTGGCGGTG...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp ATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTAGGAGCATATGCTTCTaGAGGGTAGCCCGCTCAAGA +
Preference number: 5 (lower is better)
Translates to: MNEKLERSWHTDQPKPLPRSICF*RVARSR
Trigger: TCTTGAGCGGGCTACCCTCAAGAAGCATATGCTCCT...AGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGCACCTGCCTGCAGATTaGCTCAGTCATCTGCATCTG +
Preference number: 5 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVHLPAD*LSHLHL
Trigger: CAGATGCAGATGACTGAGCAAATCTGCAGGCAGGTG...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CAA 90 bp ATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTGGGACAAAGAGCGAAGATGCCAGTGTCTaGCTGGTTTGGACAGGCTTG +
Preference number: 5 (lower is better)
Translates to: ITLGGPFVKLFLLCGTKSEDASV*LVWTGL
Trigger: CAAGCCTGTCCAAACCAGCAAGACACTGGCATCTTC...GCTCTTTGTCCCACAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CAA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGAAATGCACTTTGAGGTaGCCACGGGTGGTAAAACGG +
Preference number: 5 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVKCTLR*PRVVKR
Trigger: CCGTTTTACCACCCGTGGCAACCTCAAAGTGCATTT...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp AGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGTTAGTTGCATGCGAGTaGCCGTGCTACTTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: RGLGTLTSQNLYLNVTIRLVACE*PCYFLP
Trigger: TGGCAGAAAGTAGCACGGCAACTCGCATGCAACTAA...CCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp AGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGAAGCTGCCAGTGGACTaGAAGTGGTTGGTAAGCAGT +
Preference number: 5 (lower is better)
Translates to: RGLGTLTSQNLYLNVTIRKLPVD*KWLVSS
Trigger: ACTGCTTACCAACCACTTCAAGTCCACTGGCAGCTT...CCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp TGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGTGGCAAAGAAGACTGTaGAGTAGTTTTCTCATTACT +
Preference number: 5 (lower is better)
Translates to: WVTNYWSIFSTGTFWSRGWQRRL*SSFLIT
Trigger: AGTAATGAGAAAACTACTCAACAGTCTTCTTTGCCA...CCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp ATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTGGGACAAAGAGCTCATGGGCAGGCCATTaGACAGGAATGCCACATACT +
Preference number: 5 (lower is better)
Translates to: ITLGGPFVKLFLLCGTKSSWAGH*TGMPHT
Trigger: AGTATGTGGCATTCCTGTCAAATGGCCTGCCCATGA...GCTCTTTGTCCCACAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CAA 90 bp AGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGTCATGGGCAGGCCATTaGACAGGAATGCCACATACT +
Preference number: 5 (lower is better)
Translates to: RGLGTLTSQNLYLNVTIRSWAGH*TGMPHT
Trigger: AGTATGTGGCATTCCTGTCAAATGGCCTGCCCATGA...CCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCCTACTTCCTAGGGTaGGGTCACCAATTACTGGAG +
Preference number: 5 (lower is better)
Translates to: HFSLLPRVGSPITGASSVPYFLG*GHQLLE
Trigger: CTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGG...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACACCTGCCTGCAGATTaGCTCAGTCATCTGCATCTG +
Preference number: 5 (lower is better)
Translates to: HFSLLPRVGSPITGASSVHLPAD*LSHLHL
Trigger: CAGATGCAGATGACTGAGCAAATCTGCAGGCAGGTG...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CAA 90 bp GGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGATTTACTTGGAGAGGGTTCCCCTaGAGAAAGCTGCAGAGAATC +
Preference number: 5 (lower is better)
Translates to: GTLTSQNLYLNVTIRGFTWRGFP*RKLQRI
Trigger: GATTCTCTGCAGCTTTCTCAAGGGGAACCCTCTCCA...AGTAAATCCCCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CAA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGAAATGCACTTTGAGGTaGCCACGGGTGGTAAAACGG +
Preference number: 5 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQKCTLR*PRVVKR
Trigger: CCGTTTTACCACCCGTGGCAACCTCAAAGTGCATTT...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp AGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATGAGCACAAACTTATaGAAAGCAGGGAGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: SWRGLGTLTSQNLYLNVTMSTNL*KAGSPG
Trigger: TCCAGGACTCCCTGCTTTCAATAAGTTTGTGCTCAT...GGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp GGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGATTTACTTTAGTTGCATGCGAGTaGCCGTGCTACTTTCTGCCA +
Preference number: 5 (lower is better)
Translates to: GTLTSQNLYLNVTIRGFTLVACE*PCYFLP
Trigger: TGGCAGAAAGTAGCACGGCAACTCGCATGCAACTAA...AGTAAATCCCCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCCCCGGAGACTGTAGATaGCTCGGAGCCATTCTCCTG +
Preference number: 5 (lower is better)
Translates to: VLATFLNSLIISSSTMLTPGDCR*LGAILL
Trigger: CAGGAGAATGGCTCCGAGCAATCTACAGTCTCCGGG...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp CACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGGAGCAGGGGGAGGAATGGCAAAGAAGACTGTaGAGTAGTTTTCTCATTACT +
Preference number: 5 (lower is better)
Translates to: HQLLEHLQYRHLLEQGEEWQRRL*SSFLIT
Trigger: AGTAATGAGAAAACTACTCAACAGTCTTCTTTGCCA...TTCCTCCCCCTGCTCCAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCCTGGCTCCTTTCTCATaGCCTCCTGCAGGCTCAGCT +
Preference number: 5 (lower is better)
Translates to: VLATFLNSLIISSSTMLTLAPFS*PPAGSA
Trigger: AGCTGAGCCTGCAGGAGGCAATGAGAAAGGAGCCAG...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp AAAATCAGGGCTCATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTCATGGGCAGGCCATTaGACAGGAATGCCACATACT +
Preference number: 5 (lower is better)
Translates to: KIRAHNSGRSFCEAVSALSWAGH*TGMPHT
Trigger: AGTATGTGGCATTCCTGTCAAATGGCCTGCCCATGA...CAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTATGAGCCCTGATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CAA 90 bp TTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCACCTTCTGACAGTTTGCTACTTCTaGTCTATGATGGGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: FLGLGHQLLEHLQYRHLLTVCYF*SMMGFS
Trigger: TGAGAAGCCCATCATAGACAAGAAGTAGCAAACTGT...CAGAAGGTGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp TCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACCGGCAACAGTTTGCTACTTCTaGTCTATGATGGGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: SLLPRVGSPITGASSVPATVCYF*SMMGFS
Trigger: TGAGAAGCCCATCATAGACAAGAAGTAGCAAACTGT...TGCCGGTACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp GGGGGCCATCCCCTTGTAAGCACAGTAATTTCCAAGCTCAGGGACTACAGAAAATGGCAAGAAATCAGCTaGTTTCCCAACTTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: GGHPLVSTVISKLRDYRKWQEIS*FPNFER
Trigger: CCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCA...TTTTCTGTAGTCCCTGAGCTTGGAAATTACTGTGCTTACAAGGGGATGGCCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CAA 90 bp TTCATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGCTCCTGGGAGACCTCTaGGCAAGAAATCAGCTTGTT +
Preference number: 5 (lower is better)
Translates to: FISPYFLGLGHQLLEHLQLLGDL*ARNQLV
Trigger: AACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGAG...CTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp CATTTCTCCCTACTTCCTAGGGTTGGGTCACCAATTACTGGAGCATCTTCAGTACTCCTGGGAGACCTCTaGGCAAGAAATCAGCTTGTT +
Preference number: 5 (lower is better)
Translates to: HFSLLPRVGSPITGASSVLLGDL*ARNQLV
Trigger: AACAAGCTGATTTCTTGCCAAGAGGTCTCCCAGGAG...TACTGAAGATGCTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGGAGAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATTGGAAGAAGGCCTGCTaGGGCGTTTCTGCCCCTGTG +
Preference number: 5 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNWKKAC*GVSAPV
Trigger: CACAGGGGCAGAAACGCCCAAGCAGGCCTTCTTCCA...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000450879.2
ENST00000546363.5
CDS-3UTR CAA 90 bp TGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCTGGCAAGAAATCAGCTaGTTTCCCAACTTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: WRGLGTLTSQNLYLNVTIWQEIS*FPNFER
Trigger: CCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCA...GATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp TTCATCAACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCACCACTTCCATTCTTaGGCTTCAGGAGCCCTGGGG +
Preference number: 5 (lower is better)
Translates to: FINHADQKCSLKIRTSHFHHFHS*ASGALG
Trigger: CCCCAGGGCTCCTGAAGCCAAAGAATGGAAGTGGTG...GAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp AAAATCAGGGCTCATAACTCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGATGAGCACAAACTTATaGAAAGCAGGGAGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: KIRAHNSGRSFCEAVSALMSTNL*KAGSPG
Trigger: TCCAGGACTCCCTGCTTTCAATAAGTTTGTGCTCAT...CAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGAGTTATGAGCCCTGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CAA 90 bp AACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCCAAATGTGCTGATGCCGGACTaGAGCTTCTCTCCGGTTTGC +
Preference number: 5 (lower is better)
Translates to: NHADQKCSLKIRTSHFPNVLMPD*SFSPVC
Trigger: GCAAACCGGAGAGAAGCTCAAGTCCGGCATCAGCAC...ATTTGGGAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp TTCATCAACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCCTTCCCTGGATCCCATaGTTGGAGGCACCTTCCCAG +
Preference number: 5 (lower is better)
Translates to: FINHADQKCSLKIRTSHFLPWIP*LEAPSQ
Trigger: CTGGGAAGGTGCCTCCAACAATGGGATCCAGGGAAG...GAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp AGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACAGTTTGCTACTTCTaGTCTATGATGGGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: RSWRGLGTLTSQNLYLNVTVCYF*SMMGFS
Trigger: TGAGAAGCCCATCATAGACAAGAAGTAGCAAACTGT...CACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp GTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACCCCCTACTTCCTAGGGTaGGGTCACCAATTACTGGAG +
Preference number: 5 (lower is better)
Translates to: VLATFLNSLIISSSTMLTPYFLG*GHQLLE
Trigger: CTCCAGTAATTGGTGACCCAACCCTAGGAAGTAGGG...GGTCAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp GAGGTCATCATGAATGAGAAGCTGGAGAGGTCTTGGCACACTGACCAGCCAAAATGGCAAAGAAGACTGTaGAGTAGTTTTCTCATTACT +
Preference number: 5 (lower is better)
Translates to: EVIMNEKLERSWHTDQPKWQRRL*SSFLIT
Trigger: AGTAATGAGAAAACTACTCAACAGTCTTCTTTGCCA...TTTTGGCTGGTCAGTGTGCCAAGACCTCTCCAGCTTCTCATTCATGATGACCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS TCA 90 bp TTCCCAGAGACACAGACTCTCTCTCTCTCTCTGATTCTCTGTTCTTaGCTCTCTCTCTTTCTCTCTCAATCTTTGCAAGTCTTTAAAGGG +
Preference number: 5 (lower is better)
Translates to: FPETQTLSLSLILCS*LSLFLSQSLQVFKG
Trigger: CCCTTTAAAGACTTGCAAAGATTGAGAGAGAAAGAGAGAGAGTCAAGAACAGAGAATCAGAGAGAGAGAGAGAGTCTGTGTCTCTGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614342.1
CDS TCA 90 bp AGAGATGTTCTTCTTTCCCAGAGACACAGACTCTCTCTCTCTCTCTaGTTCTCTGTTCTTGACTCTCTCTCTTTCTCTCTCAATCTTTGC +
Preference number: 5 (lower is better)
Translates to: RDVLLSQRHRLSLSL*FSVLDSLSFSLNLC
Trigger: GCAAAGATTGAGAGAGAAAGAGAGAGAGTCAAGAACAGAGAATCAGAGAGAGAGAGAGAGTCTGTGTCTCTGGGAAAGAAGAACATCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614342.1
CDS-3UTR CAA 90 bp TTCATCAACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCAGTTGGGTCAGTGAATaGTGCGCAGCACTTGGCACA +
Preference number: 5 (lower is better)
Translates to: FINHADQKCSLKIRTSHFSWVSE*CAALGT
Trigger: TGTGCCAAGTGCTGCGCACAATTCACTGACCCAACT...GAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp TATGTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGAGGAGCATATGCTTCTaGAGGGTAGCCCGCTCAAGA +
Preference number: 5 (lower is better)
Translates to: YVLATFLNSLIISSSTMLRSICF*RVARSR
Trigger: TCTTGAGCGGGCTACCCTCAAGAAGCATATGCTCCT...CAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp TTCATCAACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCGAAGATGCCAGTGTCTaGCTGGTTTGGACAGGCTTG +
Preference number: 5 (lower is better)
Translates to: FINHADQKCSLKIRTSHFEDASV*LVWTGL
Trigger: CAAGCCTGTCCAAACCAGCAAGACACTGGCATCTTC...GAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS-3UTR CAA 90 bp GGCACACTGACCAGCCAAAACCTTTACCTTAATGTGACCATCAGGGGATTTACTTTTCTCTCTCAATCTTaGCAAGTCTTTAAAGGGGAG +
Preference number: 5 (lower is better)
Translates to: GTLTSQNLYLNVTIRGFTFLSQS*QVFKGE
Trigger: CTCCCCTTTAAAGACTTGCAAAGATTGAGAGAGAAA...AGTAAATCCCCTGATGGTCACATTAAGGTAAAGGTTTTGGCTGGTCAGTGTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000614342.1
CDS-3UTR CAA 90 bp TATGTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGAAGCTGCCAGTGGACTaGAAGTGGTTGGTAAGCAGT +
Preference number: 5 (lower is better)
Translates to: YVLATFLNSLIISSSTMLKLPVD*KWLVSS
Trigger: ACTGCTTACCAACCACTTCAAGTCCACTGGCAGCTT...CAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAACATA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp TTCATCAACCATGCTGACCAAAAATGCTCCTTAAAGATACGAACTTCACATTTCAAGCTGCCAGTGGACTaGAAGTGGTTGGTAAGCAGT +
Preference number: 5 (lower is better)
Translates to: FINHADQKCSLKIRTSHFKLPVD*KWLVSS
Trigger: ACTGCTTACCAACCACTTCAAGTCCACTGGCAGCTT...GAAATGTGAAGTTCGTATCTTTAAGGAGCATTTTTGGTCAGCATGGTTGATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS-3UTR CAA 90 bp TATGTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGTGGCAAGAAATCAGCTaGTTTCCCAACTTTGAGAGG +
Preference number: 5 (lower is better)
Translates to: YVLATFLNSLIISSSTMLWQEIS*FPNFER
Trigger: CCTCTCAAAGTTGGGAAACAAGCTGATTTCTTGCCA...CAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAACATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS-3UTR CAA 90 bp TATGTTCTAGCAACATTCCTTAACTCTCTCATCATTAGTTCATCAACCATGCTGACAGTTTGCTACTTCTaGTCTATGATGGGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: YVLATFLNSLIISSSTMLTVCYF*SMMGFS
Trigger: TGAGAAGCCCATCATAGACAAGAAGTAGCAAACTGT...CAGCATGGTTGATGAACTAATGATGAGAGAGTTAAGGAATGTTGCTAGAACATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000537235.2
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS GCA 72 bp GGGTCTGCGGCAGCCTCTGCACCCAGCGGCCCAGACTaGGGAGATGGAGATCGGCAGCGGCGGGGGCAGGGA +
Preference number: 6 (lower is better)
Translates to: GSAAASAPSGPD*GDGDRQRRGQG
Trigger: TCCCTGCCCCCGCCGCTGCCGATCTCCATCTCCGCAGTCTGGGCCGCTGGGTGCAGAGGCTGCCGCAGACCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000611430.4
CDS GCA 72 bp CAGGGCACCCCGAGACGAGAGCTCCTCTCGGATTCGTaGGCCATGGTTGTGGGGGAAGTGGAGGGCCAGGTG +
Preference number: 6 (lower is better)
Translates to: QGTPRRELLSDS*AMVVGEVEGQV
Trigger: CACCTGGCCCTCCACTTCCCCCACAACCATGGCGCACGAATCCGAGAGGAGCTCTCGTCTCGGGGTGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS CAA 90 bp GGGAAGTGGAGGGCCAGGTGGGGTGGGAGACAATGGATATTGGGATaGAGGGAGGCGATGGCCGCTGGGTCTGCGGCAGCCTCTGCACCC +
Preference number: 6 (lower is better)
Translates to: GKWRARWGGRQWILG*REAMAAGSAAASAP
Trigger: GGGTGCAGAGGCTGCCGCAGACCCAGCGGCCATCGCCTCCCTCAATCCCAATATCCATTGTCTCCCACCCCACCTGGCCCTCCACTTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS GCA 72 bp CAGAGGCTTGCGCTCAACCCCTCCACCTGGAGTGGCTaGCTCCTCCTCGGCCTTCTCTGGTGGCACGGACAT +
Preference number: 6 (lower is better)
Translates to: QRLALNPSTWSG*LLLGLLWWHGH
Trigger: ATGTCCGTGCCACCAGAGAAGGCCGAGGAGGAGGCAGCCACTCCAGGTGGAGGGGTTGAGCGCAAGCCTCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS CCA 72 bp CTGAAGACTCCTCTCCTCTCCTCTCTGGGCCCCAGGTaGGATCCGTGGGCACGGAGGACCCAGAATCTGGGG +
Preference number: 6 (lower is better)
Translates to: LKTPLLSSLGPR*DPWARRTQNLG
Trigger: CCCCAGATTCTGGGTCCTCCGTGCCCACGGATCCCACCTGGGGCCCAGAGAGGAGAGGAGAGGAGTCTTCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000541965.1
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS CCA 72 bp CAGCTCACCACTTCCATTCTTTGGCTTCAGGAGCCCTaGGGAGGCAGTGGCCTCAAGGCCTCGGGCTGCCCC +
Preference number: 6 (lower is better)
Translates to: QLTTSILWLQEP*GGSGLKASGCP
Trigger: GGGGCAGCCCGAGGCCTTGAGGCCACTGCCTCCCCAGGGCTCCTGAAGCCAAAGAATGGAAGTGGTGAGCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS GCA 72 bp CCGGGCAGCTGGACTGGCCTTGTGGCCCACGAAATGTaGACGCAGATTACCCCTGGTGGAGAAGGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: PGSWTGLVAHEM*TQITPGGEGSA
Trigger: GGCAGAGCCTTCTCCACCAGGGGTAATCTGCGTGCACATTTCGTGGGCCACAAGGCCAGTCCAGCTGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS GCA 72 bp TCCTCCTCCTCAGACAACTCCTCTTCCGGTGATGGCTaGTGGGACTGCTGCTGGGGGAAACTCCGTGCCCCG +
Preference number: 6 (lower is better)
Translates to: SSSSDNSSSGDG*WDCCWGKLRAP
Trigger: CGGGGCACGGAGTTTCCCCCAGCAGCAGTCCCAGCAGCCATCACCGGAAGAGGAGTTGTCTGAGGAGGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS CCA 72 bp TCCTCCTCAGACAACTCCTCTTCCGGTGATGGCTGCTaGGACTGCTGCTGGGGGAAACTCCGTGCCCCGGAG +
Preference number: 6 (lower is better)
Translates to: SSSDNSSSGDGC*DCCWGKLRAPE
Trigger: CTCCGGGGCACGGAGTTTCCCCCAGCAGCAGTCCCAGCAGCCATCACCGGAAGAGGAGTTGTCTGAGGAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS CAA 90 bp CTGGGACTGCTGCTGGGGGAAACTCCGTGCCCCGGAGACTGTAGATaGCTCGGAGCCATTCTCCTGAGCAGCTCCTCCACCTTCAGGGAG +
Preference number: 6 (lower is better)
Translates to: LGLLLGETPCPGDCR*LGAILLSSSSTFRE
Trigger: CTCCCTGAAGGTGGAGGAGCTGCTCAGGAGAATGGCTCCGAGCAATCTACAGTCTCCGGGGCACGGAGTTTCCCCCAGCAGCAGTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS TCA 72 bp CGTTTCTGCCCCTGTGGCAGCGACCAGGAAATGCCCTaGAGACTCCTCTCCTCTCCTCTCTGGGCCCCAGGT +
Preference number: 6 (lower is better)
Translates to: RFCPCGSDQEMP*RLLSSPLWAPG
Trigger: ACCTGGGGCCCAGAGAGGAGAGGAGAGGAGTCTTCAGGGCATTTCCTGGTCGCTGCCACAGGGGCAGAAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450879.2
ENST00000546363.5
CDS TCA 72 bp AGCCGCTGTACCTGTGGCAGCGACCAGGAAATGCCCTaGAGACTCCTCTCCTCTCCTCTCTGGGCCCCAGGT +
Preference number: 6 (lower is better)
Translates to: SRCTCGSDQEMP*RLLSSPLWAPG
Trigger: ACCTGGGGCCCAGAGAGGAGAGGAGAGGAGTCTTCAGGGCATTTCCTGGTCGCTGCCACAGGTACAGCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000537235.2
ENST00000541965.1
ENST00000614342.1
CDS CCA 72 bp CCAGGTGGGATCCGTGGGCACGGAGGACCCAGAATCTaGGGGGTTGCTATGCTCTGTGTCCATGACCTGAGG +
Preference number: 6 (lower is better)
Translates to: PGGIRGHGGPRI*GVAMLCVHDLR
Trigger: CCTCAGGTCATGGACACAGAGCATAGCAACCCCCCAGATTCTGGGTCCTCCGTGCCCACGGATCCCACCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000541965.1
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS CAA 72 bp CTGCTGGGGGAAACTCCGTGCCCCGGAGACTGTAGATaGCTCGGAGCCATTCTCCTGAGCAGCTCCTCCACC +
Preference number: 6 (lower is better)
Translates to: LLGETPCPGDCR*LGAILLSSSST
Trigger: GGTGGAGGAGCTGCTCAGGAGAATGGCTCCGAGCAATCTACAGTCTCCGGGGCACGGAGTTTCCCCCAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS CAA 90 bp CTCGGGCTGCCCCAAGACACTGTGCTGCCAGTAGTCCCGTGGTGCTaGGGAATGCCAGATGAGGCGAGGCAATCAGCTGATCTGTGCTGC +
Preference number: 6 (lower is better)
Translates to: LGLPQDTVLPVVPWC*GMPDEARQSADLCC
Trigger: GCAGCACAGATCAGCTGATTGCCTCGCCTCATCTGGCATTCCCAAGCACCACGGGACTACTGGCAGCACAGTGTCTTGGGGCAGCCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS CAA 90 bp AGGGACCCATCACTTCTCCGTAGCTCAGCTCACCACTTCCATTCTTaGGCTTCAGGAGCCCTGGGGAGGCAGTGGCCTCAAGGCCTCGGG +
Preference number: 6 (lower is better)
Translates to: RDPSLLRSSAHHFHS*ASGALGRQWPQGLG
Trigger: CCCGAGGCCTTGAGGCCACTGCCTCCCCAGGGCTCCTGAAGCCAAAGAATGGAAGTGGTGAGCTGAGCTACGGAGAAGTGATGGGTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS CAA 90 bp TGGCAGATGGGGCAGGAATTCTGTGCCCGGGCAGCTGGACTGGCCTaGTGGCCCACGAAATGTGCACGCAGATTACCCCTGGTGGAGAAG +
Preference number: 6 (lower is better)
Translates to: WQMGQEFCARAAGLA*WPTKCARRLPLVEK
Trigger: CTTCTCCACCAGGGGTAATCTGCGTGCACATTTCGTGGGCCACAAGGCCAGTCCAGCTGCCCGGGCACAGAATTCCTGCCCCATCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS CCA 72 bp CAGGAATTCTGTGCCCGGGCAGCTGGACTGGCCTTGTaGCCCACGAAATGTGCACGCAGATTACCCCTGGTG +
Preference number: 6 (lower is better)
Translates to: QEFCARAAGLAL*PTKCARRLPLV
Trigger: CACCAGGGGTAATCTGCGTGCACATTTCGTGGGCCACAAGGCCAGTCCAGCTGCCCGGGCACAGAATTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS CCA 72 bp GACGCGCTGGGACCTTCGCAGTCCGAGATTAACTGTTaGGGTTTCCGCTGCTTTCGCCGAGACATTCCCGGG +
Preference number: 6 (lower is better)
Translates to: DALGPSQSEINC*GFRCFRRDIPG
Trigger: CCCGGGAATGTCTCGGCGAAAGCAGCGGAAACCCCAACAGTTAATCTCGGACTGCGAAGGTCCCAGCGCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613414.4
ENST00000614342.1
CDS CAA 90 bp CCCCCTCTTCCTTGCCTCCTAAAACACCACTGCTTCCCTGCTCCATaGGCTGAGGCTGATCCAGGCTGTCAGGTGGTGGTGGTGGTGGCA +
Preference number: 6 (lower is better)
Translates to: PPLPCLLKHHCFPAP*AEADPGCQVVVVVA
Trigger: TGCCACCACCACCACCACCTGACAGCCTGGATCAGCCTCAGCCAATGGAGCAGGGAAGCAGTGGTGTTTTAGGAGGCAAGGAAGAGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS TCA 72 bp GTGAATTGTGCGCAGCACTTGGCACAGACTTGGGGGTaGTCCTCCTCGCTAGCATCACCTCCGAGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: VNCAQHLAQTWG*SSSLASPPSSA
Trigger: GGCAGAGCTCGGAGGTGATGCTAGCGAGGAGGATCACCCCCAAGTCTGTGCCAAGTGCTGCGCACAATTCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS CCA 72 bp TCCTCTCGGATTCGTGCGCCATGGTTGTGGGGGAAGTaGAGGGCCAGGTGGGGTGGGAGACAATGGATATTG +
Preference number: 6 (lower is better)
Translates to: SSRIRAPWLWGK*RARWGGRQWIL
Trigger: CAATATCCATTGTCTCCCACCCCACCTGGCCCTCCACTTCCCCCACAACCATGGCGCACGAATCCGAGAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000611430.4
CDS CCA 72 bp ACCCCAGTGGGTGGTAAAGGTGGAAGAAGGCCTGCTTaGGCGTTTCTGCCCCTGTGGCAGCGACCAGGAAAT +
Preference number: 6 (lower is better)
Translates to: TPVGGKGGRRPA*AFLPLWQRPGN
Trigger: ATTTCCTGGTCGCTGCCACAGGGGCAGAAACGCCCAAGCAGGCCTTCTTCCACCTTTACCACCCACTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000450879.2
ENST00000546363.5
CDS CCA 72 bp AGATGGGGCAGGAATTCTGTGCCCGGGCAGCTGGACTaGCCTTGTGGCCCACGAAATGTGCACGCAGATTAC +
Preference number: 6 (lower is better)
Translates to: RWGRNSVPGQLD*PCGPRNVHADY
Trigger: GTAATCTGCGTGCACATTTCGTGGGCCACAAGGCCAGTCCAGCTGCCCGGGCACAGAATTCCTGCCCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS CCA 72 bp ACCCCAGTGGGTGGTAAAGGTGGAAGAAGGCCTGCTTaGGCGTTTCTGCCCCTGAAGAGGAAGAGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: TPVGGKGGRRPA*AFLPLKRKRRR
Trigger: CCTCCTCCTCTTCCTCTTCAGGGGCAGAAACGCCCAAGCAGGCCTTCTTCCACCTTTACCACCCACTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS CAA 72 bp GGCTGTACCTGGTGGTGTGCCAGGAGCATATGCTTCTaGAGGGTAGCCCGCTCAAGAAAGCCCTGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: GCTWWCARSICF*RVARSRKPCLQ
Trigger: CTGCAGGCAGGGCTTTCTTGAGCGGGCTACCCTCAAGAAGCATATGCTCCTGGCACACCACCAGGTACAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS TCA 72 bp AAGGTGGAAGAAGGCCTGCTTGGGCGTTTCTGCCCCTaGAGAGGAAGAGGAGGAGGAGGAGGAAGATGCCAG +
Preference number: 6 (lower is better)
Translates to: KVEEGLLGRFCP*RGRGGGGGRCQ
Trigger: CTGGCATCTTCCTCCTCCTCCTCCTCTTCCTCTTCAGGGGCAGAAACGCCCAAGCAGGCCTTCTTCCACCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS TCA 72 bp GTGAATTGTGCGCAGCACTTGGCACAGACTTGGGGGTaGTCCTCCTCGCTAGCATCACCGTTCTCAGACGCG +
Preference number: 6 (lower is better)
Translates to: VNCAQHLAQTWG*SSSLASPFSDA
Trigger: CGCGTCTGAGAACGGTGATGCTAGCGAGGAGGATCACCCCCAAGTCTGTGCCAAGTGCTGCGCACAATTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000546363.5
ENST00000613414.4
ENST00000614342.1
CDS TCA 72 bp ACCTGGTCTCGTCTCCCCCTTGGGTCCGAAGCCAATTaGTGCCTCTCCCCCAGCGCAAATCACTGTGAAGCA +
Preference number: 6 (lower is better)
Translates to: TWSRLPLGSEAN*CLSPSANHCEA
Trigger: TGCTTCACAGTGATTTGCGCTGGGGGAGAGGCATCAATTGGCTTCGGACCCAAGGGGGAGACGAGACCAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000541965.1
ENST00000614342.1
CDS TCA 72 bp ACATACTGGTTCTGTGGCAGCGACCAGGAAATGCCCTaGAGACTCCTCTCCTCTCCTCTCTGGGCCCCAGGT +
Preference number: 6 (lower is better)
Translates to: TYWFCGSDQEMP*RLLSSPLWAPG
Trigger: ACCTGGGGCCCAGAGAGGAGAGGAGAGGAGTCTTCAGGGCATTTCCTGGTCGCTGCCACAGAACCAGTATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000611430.4
ENST00000613414.4
CDS GCA 72 bp GCAAAGGGCTGTACCTGGTGGTGTGCCAGGAGCATATaGTTCTTGAGGGTAGCCCGCTCAAGAAAGCCCTGC +
Preference number: 6 (lower is better)
Translates to: AKGCTWWCARSI*FLRVARSRKPC
Trigger: GCAGGGCTTTCTTGAGCGGGCTACCCTCAAGAAGCATATGCTCCTGGCACACCACCAGGTACAGCCCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS CCA 72 bp CCTCAGGCCGGGGTTCAGAGGAGGCCGAAGAGTTGTTaGGGTTCTCCTGGCCCCCAATTATCACCATTACAG +
Preference number: 6 (lower is better)
Translates to: PQAGVQRRPKSC*GSPGPQLSPLQ
Trigger: CTGTAATGGTGATAATTGGGGGCCAGGAGAACCCCAACAACTCTTCGGCCTCCTCTGAACCCCGGCCTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000541965.1
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS CAA 72 bp CCCCAAGACACTGTGCTGCCAGTAGTCCCGTGGTGCTaGGGAATGCCAGATGAGGCGAGGCAATCAGCTGAT +
Preference number: 6 (lower is better)
Translates to: PQDTVLPVVPWC*GMPDEARQSAD
Trigger: ATCAGCTGATTGCCTCGCCTCATCTGGCATTCCCAAGCACCACGGGACTACTGGCAGCACAGTGTCTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS CAA 72 bp CCTTGCCTCCTAAAACACCACTGCTTCCCTGCTCCATaGGCTGAGGCTGATCCAGGCTGTCAGGTGGTGGTG +
Preference number: 6 (lower is better)
Translates to: PCLLKHHCFPAP*AEADPGCQVVV
Trigger: CACCACCACCTGACAGCCTGGATCAGCCTCAGCCAATGGAGCAGGGAAGCAGTGGTGTTTTAGGAGGCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS CAA 90 bp GGGGCAAAGGGCTGTACCTGGTGGTGTGCCAGGAGCATATGCTTCTaGAGGGTAGCCCGCTCAAGAAAGCCCTGCCTGCAGAAAACACAA +
Preference number: 6 (lower is better)
Translates to: GAKGCTWWCARSICF*RVARSRKPCLQKTQ
Trigger: TTGTGTTTTCTGCAGGCAGGGCTTTCTTGAGCGGGCTACCCTCAAGAAGCATATGCTCCTGGCACACCACCAGGTACAGCCCTTTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS GCA 72 bp CTGGTGGGCGAGGAATTCAGTTGGGTCAGTGAATTGTaGGCAGCACTTGGCACAGACTTGGGGGTGATCCTC +
Preference number: 6 (lower is better)
Translates to: LVGEEFSWVSEL*AALGTDLGVIL
Trigger: GAGGATCACCCCCAAGTCTGTGCCAAGTGCTGCGCACAATTCACTGACCCAACTGAATTCCTCGCCCACCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000541965.1
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS GCA 72 bp GCCACATACTGGTTCTGGTGGTGTGCCAGGAGCATATaGTTCTTGAGGGTAGCCCGCTCAAGAAAGCCCTGC +
Preference number: 6 (lower is better)
Translates to: ATYWFWWCARSI*FLRVARSRKPC
Trigger: GCAGGGCTTTCTTGAGCGGGCTACCCTCAAGAAGCATATGCTCCTGGCACACCACCAGAACCAGTATGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450879.2
ENST00000546363.5
CDS CAA 72 bp TACTGGTTCTGGTGGTGTGCCAGGAGCATATGCTTCTaGAGGGTAGCCCGCTCAAGAAAGCCCTGCCTGCAG +
Preference number: 6 (lower is better)
Translates to: YWFWWCARSICF*RVARSRKPCLQ
Trigger: CTGCAGGCAGGGCTTTCTTGAGCGGGCTACCCTCAAGAAGCATATGCTCCTGGCACACCACCAGAACCAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450879.2
ENST00000546363.5
CDS CAA 90 bp AGAACATGCGTTCTGGTGGGCGAGGAATTCAGTTGGGTCAGTGAATaGTGCGCAGCACTTGGCACAGACTTGGGGGTGATCCTCCTCGCT +
Preference number: 6 (lower is better)
Translates to: RTCVLVGEEFSWVSE*CAALGTDLGVILLA
Trigger: AGCGAGGAGGATCACCCCCAAGTCTGTGCCAAGTGCTGCGCACAATTCACTGACCCAACTGAATTCCTCGCCCACCAGAACGCATGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000541965.1
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS TCA 72 bp ATGCGTTCTGGTGGGCGAGGAATTCAGTTGGGTCAGTaGATTGTGCGCAGCACTTGGCACAGACTTGGGGGT +
Preference number: 6 (lower is better)
Translates to: MRSGGRGIQLGQ*IVRSTWHRLGG
Trigger: ACCCCCAAGTCTGTGCCAAGTGCTGCGCACAATTCACTGACCCAACTGAATTCCTCGCCCACCAGAACGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000541965.1
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS TCA 72 bp GGAGCTGGAATTCCAGGGCTTCATGGGCAGGCCATTTaGCAGGAATGCCACATACTGGTTCTGGTGGTGTGC +
Preference number: 6 (lower is better)
Translates to: GAGIPGLHGQAI*QECHILVLVVC
Trigger: GCACACCACCAGAACCAGTATGTGGCATTCCTGTCAAATGGCCTGCCCATGAAGCCCTGGAATTCCAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450879.2
ENST00000546363.5
CDS TCA 72 bp GTGAATTGTGCGCAGCACTTGGCACAGACTTGGGGGTaGTCCTCCTCGCTAGCATCACTTGGTCTTAACCGG +
Preference number: 6 (lower is better)
Translates to: VNCAQHLAQTWG*SSSLASLGLNR
Trigger: CCGGTTAAGACCAAGTGATGCTAGCGAGGAGGATCACCCCCAAGTCTGTGCCAAGTGCTGCGCACAATTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541965.1
CDS TCA 72 bp GGAGCTGGAATTCCAGGGCTTCATGGGCAGGCCATTTaGCAGGAATGCCACATACTGGTTCTGTGGCAGCGA +
Preference number: 6 (lower is better)
Translates to: GAGIPGLHGQAI*QECHILVLWQR
Trigger: TCGCTGCCACAGAACCAGTATGTGGCATTCCTGTCAAATGGCCTGCCCATGAAGCCCTGGAATTCCAGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611430.4
ENST00000613414.4
CDS CAA 72 bp GTTCTGGTGGGCGAGGAATTCAGTTGGGTCAGTGAATaGTGCGCAGCACTTGGCACAGACTTGGGGGTGATC +
Preference number: 6 (lower is better)
Translates to: VLVGEEFSWVSE*CAALGTDLGVI
Trigger: GATCACCCCCAAGTCTGTGCCAAGTGCTGCGCACAATTCACTGACCCAACTGAATTCCTCGCCCACCAGAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000541965.1
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS CAA 72 bp TGGAGCTGGAATTCCAGGGCTTCATGGGCAGGCCATTaGACAGGAATGCCACATACTGGTTCTGTGGCAGCG +
Preference number: 6 (lower is better)
Translates to: WSWNSRASWAGH*TGMPHTGSVAA
Trigger: CGCTGCCACAGAACCAGTATGTGGCATTCCTGTCAAATGGCCTGCCCATGAAGCCCTGGAATTCCAGCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000611430.4
ENST00000613414.4
CDS CCA 72 bp GGTTCAGAGGAGGCCGAAGAGTTGTTGGGGTTCTCCTaGCCCCCAATTATCACCATTACAGGAGGGTCAGTA +
Preference number: 6 (lower is better)
Translates to: GSEEAEELLGFS*PPIITITGGSV
Trigger: TACTGACCCTCCTGTAATGGTGATAATTGGGGGCCAGGAGAACCCCAACAACTCTTCGGCCTCCTCTGAACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000541965.1
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS CCA 72 bp CGAGGACAGCTAAGCACTCGGAGACAGATGACACACTaGTTAGGTCCAGAAGAGGCTGAGGATGAAGGTGCA +
Preference number: 6 (lower is better)
Translates to: RGQLSTRRQMTH*LGPEEAEDEGA
Trigger: TGCACCTTCATCCTCAGCCTCTTCTGGACCTAACCAGTGTGTCATCTGTCTCCGAGTGCTTAGCTGTCCTCG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS CAA 72 bp TGGAGCTGGAATTCCAGGGCTTCATGGGCAGGCCATTaGACAGGAATGCCACATACTGGTTCTGGTGGTGTG +
Preference number: 6 (lower is better)
Translates to: WSWNSRASWAGH*TGMPHTGSGGV
Trigger: CACACCACCAGAACCAGTATGTGGCATTCCTGTCAAATGGCCTGCCCATGAAGCCCTGGAATTCCAGCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000450879.2
ENST00000546363.5
CDS CCA 72 bp AGTAGAACATGCGTTCTGGTGGGCGAGGAATTCAGTTaGGTCAGTGAATTGTGCGCAGCACTTGGCACAGAC +
Preference number: 6 (lower is better)
Translates to: SRTCVLVGEEFS*VSELCAALGTD
Trigger: GTCTGTGCCAAGTGCTGCGCACAATTCACTGACCCAACTGAATTCCTCGCCCACCAGAACGCATGTTCTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000541965.1
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS CAA 90 bp CTGATCCAGGCTGTCAGGTGGTGGTGGTGGTGGCAAAGAAGACTGTaGAGTAGTTTTCTCATTACTGTCCATCTCCTTCCCAGCTGTGGC +
Preference number: 6 (lower is better)
Translates to: LIQAVRWWWWWQRRL*SSFLITVHLLPSCG
Trigger: GCCACAGCTGGGAAGGAGATGGACAGTAATGAGAAAACTACTCAACAGTCTTCTTTGCCACCACCACCACCACCTGACAGCCTGGATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS CAA 90 bp AATGCCACATACTGGTTCTGGTGGTGTGCCAGGAGCATATGCTTCTaGAGGGTAGCCCGCTCAAGAAAGCCCTGCCTGCAGAAAACACAA +
Preference number: 6 (lower is better)
Translates to: NATYWFWWCARSICF*RVARSRKPCLQKTQ
Trigger: TTGTGTTTTCTGCAGGCAGGGCTTTCTTGAGCGGGCTACCCTCAAGAAGCATATGCTCCTGGCACACCACCAGAACCAGTATGTGGCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450879.2
ENST00000546363.5
CDS GCA 72 bp GCCCAGCTTGGTAGTGAAGTCACCAACTTACTTAGTTaGATGCGAGTTGCCGTGCTACTTTCTGCCACTCCA +
Preference number: 6 (lower is better)
Translates to: AQLGSEVTNLLS*MRVAVLLSATP
Trigger: TGGAGTGGCAGAAAGTAGCACGGCAACTCGCATGCAACTAAGTAAGTTGGTGACTTCACTACCAAGCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS CCA 72 bp ACCATTACAGGAGGGTCAGTAGAACATGCGTTCTGGTaGGCGAGGAATTCAGTTGGGTCAGTGAATTGTGCG +
Preference number: 6 (lower is better)
Translates to: TITGGSVEHAFW*ARNSVGSVNCA
Trigger: CGCACAATTCACTGACCCAACTGAATTCCTCGCCCACCAGAACGCATGTTCTACTGACCCTCCTGTAATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000541965.1
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS CCA 72 bp TGGCTGAGGCTGATCCAGGCTGTCAGGTGGTGGTGGTaGTGGCAAAGAAGACTGTTGAGTAGTTTTCTCATT +
Preference number: 6 (lower is better)
Translates to: WLRLIQAVRWWW*WQRRLLSSFLI
Trigger: AATGAGAAAACTACTCAACAGTCTTCTTTGCCACCACCACCACCACCTGACAGCCTGGATCAGCCTCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS CAA 72 bp TTCTTGGGTTCCACTGCTTTCATGAGCACAAACTTATaGAAAGCAGGGAGTCCTGGAGCCGTGGCTGTGCCT +
Preference number: 6 (lower is better)
Translates to: FLGSTAFMSTNL*KAGSPGAVAVP
Trigger: AGGCACAGCCACGGCTCCAGGACTCCCTGCTTTCAATAAGTTTGTGCTCATGAAAGCAGTGGAACCCAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS TCA 72 bp AGCCAATTGATGCCTCTCCCCCAGCGCAAATCACTGTaGAGCAGAGATGTTCTTCTTTCCCAGAGACACAGA +
Preference number: 6 (lower is better)
Translates to: SQLMPLPQRKSL*SRDVLLSQRHR
Trigger: TCTGTGTCTCTGGGAAAGAAGAACATCTCTGCTTCACAGTGATTTGCGCTGGGGGAGAGGCATCAATTGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000541965.1
ENST00000614342.1
CDS GCA 72 bp CCCAATTATCACCATTACAGGAGGGTCAGTAGAACATaGGTTCTGGTGGGCGAGGAATTCAGTTGGGTCAGT +
Preference number: 6 (lower is better)
Translates to: PNYHHYRRVSRT*VLVGEEFSWVS
Trigger: ACTGACCCAACTGAATTCCTCGCCCACCAGAACGCATGTTCTACTGACCCTCCTGTAATGGTGATAATTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000541965.1
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS CCA 72 bp TCTGGGAGGTCCTTTTGTGAAGCTGTTTCTGCTCTGTaGGACAAAGAGCAGCAGGTACAGAAAAACAGGCTC +
Preference number: 6 (lower is better)
Translates to: SGRSFCEAVSAL*DKEQQVQKNRL
Trigger: GAGCCTGTTTTTCTGTACCTGCTGCTCTTTGTCCCACAGAGCAGAAACAGCTTCACAAAAGGACCTCCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000537235.2
ENST00000614342.1
CDS CAA 72 bp GCTGTCAGGTGGTGGTGGTGGTGGCAAAGAAGACTGTaGAGTAGTTTTCTCATTACTGTCCATCTCCTTCCC +
Preference number: 6 (lower is better)
Translates to: AVRWWWWWQRRL*SSFLITVHLLP
Trigger: GGGAAGGAGATGGACAGTAATGAGAAAACTACTCAACAGTCTTCTTTGCCACCACCACCACCACCTGACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS TCA 72 bp CTGTCAGGTGGTGGTGGTGGTGGCAAAGAAGACTGTTaGGTAGTTTTCTCATTACTGTCCATCTCCTTCCCA +
Preference number: 6 (lower is better)
Translates to: LSGGGGGGKEDC*VVFSLLSISFP
Trigger: TGGGAAGGAGATGGACAGTAATGAGAAAACTACTCAACAGTCTTCTTTGCCACCACCACCACCACCTGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000546363.5
ENST00000614342.1
CDS CCA 72 bp ATCACCATTACAGGAGGGTCAGTAGAACATGCGTTCTaGTGGGCGAGGAATTCAGTTGGGTCAGTGAATTGT +
Preference number: 6 (lower is better)
Translates to: ITITGGSVEHAF*WARNSVGSVNC
Trigger: ACAATTCACTGACCCAACTGAATTCCTCGCCCACCAGAACGCATGTTCTACTGACCCTCCTGTAATGGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000450879.2
ENST00000537235.2
ENST00000541965.1
ENST00000546363.5
ENST00000611430.4
ENST00000613414.4
ENST00000614342.1
CDS TCA 72 bp CTTCTTTCCCAGAGACACAGACTCTCTCTCTCTCTCTaGTTCTCTGTTCTTGACTCTCTCTCTTTCTCTCTC +
Preference number: 6 (lower is better)
Translates to: LLSQRHRLSLSL*FSVLDSLSFSL
Trigger: GAGAGAGAAAGAGAGAGAGTCAAGAACAGAGAATCAGAGAGAGAGAGAGAGTCTGTGTCTCTGGGAAAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000614342.1