RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for S100A14 (Homo sapiens)

Ensembl gene IDs: ENSG00000189334

Ensembl transcript IDs: ENST00000344616.4, ENST00000368700.7, ENST00000368701.5, ENST00000368702.5, ENST00000469571.1, ENST00000476873.5

Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTaGACAGAGACCTGGGGAAGGAAGCTGAACTTTGCAGAGATGAGG +
Preference number: 1 (lower is better)
Translates to: GDSSTHELPRASKTE*TETWGRKLNFAEMR
Trigger: CCTCATCTCTGCAAAGTTCAGCTTCCTTCCCCAGGTCTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
3UTR GCA 90 bp AGAGACCTGGGGAAGGAAGCTGAACTTTGCAGAGATGAGGACAGGTaGAGGCTAGGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATC +
Preference number: 1 (lower is better)
Translates to: RDLGKEAELCRDEDR*RLGYRVVVEETSFI
Trigger: GATAAAACTTGTCTCCTCTACCACCACCCTGTACCCTAGCCTGCACCTGTCCTCATCTCTGCAAAGTTCAGCTTCCTTCCCCAGGTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
3UTR CCA 90 bp TGGGGCAGAGCTGGAGGCAGGAAGAGAGCACTGGACAGACAGCTATaGTTTGGATTGGGGAAGAGATTAGGAAGTAGGTTCTTAAAGACC +
Preference number: 1 (lower is better)
Translates to: WGRAGGRKRALDRQL*FGLGKRLGSRFLKT
Trigger: GGTCTTTAAGAACCTACTTCCTAATCTCTTCCCCAATCCAAACCATAGCTGTCTGTCCAGTGCTCTCTTCCTGCCTCCAGCTCTGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
3UTR CCA 90 bp ATTCTTTGGCTCTTACACAATTTTTATCCCTCAAATATTCATCCCTaGCCCAACCAGTCCCCTGAGCCTCCCTCTGGTGGAGACTCCTCC +
Preference number: 1 (lower is better)
Translates to: ILWLLHNFYPSNIHP*PNQSPEPPSGGDSS
Trigger: GGAGGAGTCTCCACCAGAGGGAGGCTCAGGGGACTGGTTGGGCCAGGGATGAATATTTGAGGGATAAAAATTGTGTAAGAGCCAAAGAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
3UTR-3UTR GCA 90 bp AGTCCCCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGAGAGATGAGGACAGGTaGAGGCTAGGGTACAGGGTG +
Preference number: 2 (lower is better)
Translates to: SPLSLPLVETPPPMSSPERDEDR*RLGYRV
Trigger: CACCCTGTACCCTAGCCTGCACCTGTCCTCATCTCT...CTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
3UTR-3UTR GCA 90 bp AGTCCCCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGAAGGAAGCTGAACTTTaGAGAGATGAGGACAGGTGC +
Preference number: 2 (lower is better)
Translates to: SPLSLPLVETPPPMSSPEKEAEL*RDEDRC
Trigger: GCACCTGTCCTCATCTCTGCAAAGTTCAGCTTCCTT...CTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGGGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
3UTR-3UTR TCA 90 bp AAGAGAGCACTGGACAGACAGCTATGGTTTGGATTGGGGAAGAGATTAGGAAGTAGACTCCTCCACCCATaGGCTCCCCAGAGCATCCAA +
Preference number: 2 (lower is better)
Translates to: KRALDRQLWFGLGKRLGSRLLHP*APQSIQ
Trigger: TTGGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCT...ACTTCCTAATCTCTTCCCCAATCCAAACCATAGCTGTCTGTCCAGTGCTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
3UTR-3UTR GCA 90 bp AAGAGAGCACTGGACAGACAGCTATGGTTTGGATTGGGGAAGAGATTAGGAAGTAAGGAAGCTGAACTTTaGAGAGATGAGGACAGGTGC +
Preference number: 2 (lower is better)
Translates to: KRALDRQLWFGLGKRLGSKEAEL*RDEDRC
Trigger: GCACCTGTCCTCATCTCTGCAAAGTTCAGCTTCCTT...ACTTCCTAATCTCTTCCCCAATCCAAACCATAGCTGTCTGTCCAGTGCTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
3UTR GCA 72 bp CACATGTCACACTCTCCTCAGCCTCTCCCCCAACCCTaGTCTCCCTCCTCCCCTGCCCTAGCCCAGGGACAG +
Preference number: 3 (lower is better)
Translates to: HMSHSPQPLPQP*SPSSPALAQGQ
Trigger: CTGTCCCTGGGCTAGGGCAGGGGAGGAGGGAGAGCAGGGTTGGGGGAGAGGCTGAGGAGAGTGTGACATGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp AGTCCCCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGGGGGCAGCTGCTGGGTaGCCAGGTCCCGTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: SPLSLPLVETPPPMSSPEGAAAG*PGPVAQ
Trigger: CTGAGCTACGGGACCTGGTCACCCAGCAGCTGCCCC...CTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGGGGACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp AGTCCCCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGCACAGTTGCTCGGCATaGGATGGGGCAGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: SPLSLPLVETPPPMSSPEHSCSA*DGAAAG
Trigger: CCCAGCAGCTGCCCCATCTCATGCCGAGCAACTGTG...CTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGGGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR GCA 90 bp CCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCAGAGGGAGTTCTCAGTaGCCCCGGACAGGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: PEPPSGGDSSTHELPRASRGSSQ*PRTGLS
Trigger: GGAGAGGCCTGTCCGGGGGCACTGAGAACTCCCTCT...GGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp CCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCAGATGGGGCAGCTGCTaGGTGACCAGGTCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: PEPPSGGDSSTHELPRASRWGSC*VTRSRS
Trigger: GCTACGGGACCTGGTCACCCAGCAGCTGCCCCATCT...GGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp GGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTGCACAGAGGGGGCAGCTGCTGGGTaGCCAGGTCCCGTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GDSSTHELPRASKTECTEGAAAG*PGPVAQ
Trigger: CTGAGCTACGGGACCTGGTCACCCAGCAGCTGCCCC...CTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp CCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTGCACAGAGACCTGGGGAAGGGGCAGCTGCTGGGTaGCCAGGTCCCGTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: PPMSSPEHPRQSAQRPGEGAAAG*PGPVAQ
Trigger: CTGAGCTACGGGACCTGGTCACCCAGCAGCTGCCCC...TTCCCCAGGTCTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR GCA 90 bp CCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCATGAGATGGGGCAGCTaGTGGGTGACCAGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: PEPPSGGDSSTHELPRASMRWGS*WVTRSR
Trigger: ACGGGACCTGGTCACCCAGCAGCTGCCCCATCTCAT...GGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp CCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCTGGCCCCAGAGGAGCTaGTGGCTCATGATCTGTTGG +
Preference number: 4 (lower is better)
Translates to: PEPPSGGDSSTHELPRASWPQRS*WLMICW
Trigger: CCAACAGATCATGAGCCATCAGCTCCTCTGGGGCCA...GGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344616.4
ENST00000368702.5
CDS-3UTR TCA 90 bp AGTCCCCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGTGGCCCCAGAGGAGCTaGTGGCTCATGATCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SPLSLPLVETPPPMSSPEWPQRS*WLMICW
Trigger: CCAACAGATCATGAGCCATCAGCTCCTCTGGGGCCA...CTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000344616.4
ENST00000368702.5
CDS-3UTR TCA 90 bp AGTCCCCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGAGACTCCTCCACCCATaGGCTCCCCAGAGCATCCAA +
Preference number: 4 (lower is better)
Translates to: SPLSLPLVETPPPMSSPERLLHP*APQSIQ
Trigger: TTGGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCT...CTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp CCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCAGACTCCTCCACCCATaGGCTCCCCAGAGCATCCAA +
Preference number: 4 (lower is better)
Translates to: PEPPSGGDSSTHELPRASRLLHP*APQSIQ
Trigger: TTGGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCT...GGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp AGTCCCCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGGAGCATCCTCTGCGTTaGCTGACCGACACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: SPLSLPLVETPPPMSSPEEHPLR*LTDTVP
Trigger: TGGGACAGTGTCGGTCAGCCAACGCAGAGGATGCTC...CTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGGGGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp GGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTGCACAGAGCACAGTTGCTCGGCATaGGATGGGGCAGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GDSSTHELPRASKTECTEHSCSA*DGAAAG
Trigger: CCCAGCAGCTGCCCCATCTCATGCCGAGCAACTGTG...CTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp AGTCCCCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGTGGCCCCAGAGGAGCTaGTGGCTCATGATCCTAAGT +
Preference number: 4 (lower is better)
Translates to: SPLSLPLVETPPPMSSPEWPQRS*WLMILS
Trigger: ACTTAGGATCATGAGCCATCAGCTCCTCTGGGGCCA...CTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGGGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000368701.5
CDS-3UTR CCA 90 bp GGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTGCACAGAGAGATGGGGCAGCTGCTaGGTGACCAGGTCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: GDSSTHELPRASKTECTERWGSC*VTRSRS
Trigger: GCTACGGGACCTGGTCACCCAGCAGCTGCCCCATCT...CTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp CCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCCCCTCTCCACATCACTaGATTCCTGAGCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: PEPPSGGDSSTHELPRASPSPHH*IPEHPL
Trigger: CAGAGGATGCTCAGGAATTCAGTGATGTGGAGAGGG...GGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp AGTCCCCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGCCCTCTCCACATCACTaGATTCCTGAGCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: SPLSLPLVETPPPMSSPEPSPHH*IPEHPL
Trigger: CAGAGGATGCTCAGGAATTCAGTGATGTGGAGAGGG...CTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp GGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTGCACAGAGTCTGTTGGCAGCCGCTaGGACAAGACAGGAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GDSSTHELPRASKTECTESVGSR*DKTGGA
Trigger: GGCTCCTCCTGTCTTGTCTCAGCGGCTGCCAACAGA...CTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368702.5
CDS-3UTR GCA 90 bp AGTCCCCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGCCATCATTCTGTCAATaGCCAAGCACCCAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: SPLSLPLVETPPPMSSPEPSFCQ*PSTQLV
Trigger: GACCAGCTGGGTGCTTGGGCATTGACAGAATGATGG...CTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR GCA 90 bp CCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCCCATCATTCTGTCAATaGCCAAGCACCCAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: PEPPSGGDSSTHELPRASPSFCQ*PSTQLV
Trigger: GACCAGCTGGGTGCTTGGGCATTGACAGAATGATGG...GGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp CCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCTGGCTCATGATCTGTTaGCAGCCGCTGAGACAAGAC +
Preference number: 4 (lower is better)
Translates to: PEPPSGGDSSTHELPRASWLMIC*QPLRQD
Trigger: GTCTTGTCTCAGCGGCTGCCAACAGATCATGAGCCA...GGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344616.4
ENST00000368702.5
CDS-3UTR CCA 90 bp AGTCCCCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGGGTGCCCACTGTGTCTaGTCCTTTGGTGAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: SPLSLPLVETPPPMSSPEGAHCV*SFGESS
Trigger: AGAACTCTCACCAAAGGACCAGACACAGTGGGCACC...CTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp CCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCGGTGCCCACTGTGTCTaGTCCTTTGGTGAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: PEPPSGGDSSTHELPRASGAHCV*SFGESS
Trigger: AGAACTCTCACCAAAGGACCAGACACAGTGGGCACC...GGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp CCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCCCAGCTTCACACTCTTaGCCGCTTCTCCAATCAGCT +
Preference number: 4 (lower is better)
Translates to: PEPPSGGDSSTHELPRASPASHS*PLLQSA
Trigger: AGCTGATTGGAGAAGCGGCCAAGAGTGTGAAGCTGG...GGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp CCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCTCCACGGAGTACTGGTaGAAGTTCTTGATGAGGGTC +
Preference number: 4 (lower is better)
Translates to: PEPPSGGDSSTHELPRASSTEYW*KFLMRV
Trigger: GACCCTCATCAAGAACTTTCACCAGTACTCCGTGGA...GGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp GGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTGCACAGAGAGACTCCTCCACCCATaGGCTCCCCAGAGCATCCAA +
Preference number: 4 (lower is better)
Translates to: GDSSTHELPRASKTECTERLLHP*APQSIQ
Trigger: TTGGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCT...CTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp GGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTGCACAGAGACCGACACTGTCCCATaGTGCCCACTGTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: GDSSTHELPRASKTECTETDTVP*CPLCLV
Trigger: GACCAGACACAGTGGGCACCATGGGACAGTGTCGGT...CTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp CCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTGCACAGAGACCTGGGGAAGAGCATCCTCTGCGTTaGCTGACCGACACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: PPMSSPEHPRQSAQRPGEEHPLR*LTDTVP
Trigger: TGGGACAGTGTCGGTCAGCCAACGCAGAGGATGCTC...TTCCCCAGGTCTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp AGTCCCCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGGCAGGAAGAGAGCACTaGACAGACAGCTATGGTTTG +
Preference number: 4 (lower is better)
Translates to: SPLSLPLVETPPPMSSPEAGREH*TDSYGL
Trigger: CAAACCATAGCTGTCTGTCCAGTGCTCTCTTCCTGC...CTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGGGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp GGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACAGTCTCTCACAGTTGCTCGGCATaGGATGGGGCAGCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: GYRVVVEETSFISRPTVSHSCSA*DGAAAG
Trigger: CCCAGCAGCTGCCCCATCTCATGCCGAGCAACTGTG...AGAGACTGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp GGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTGCACAGAGTGGAGGGAGGCAGATTaGGTGAGTGTTTGCCTGACC +
Preference number: 4 (lower is better)
Translates to: GDSSTHELPRASKTECTEWREAD*VSVCLT
Trigger: GGTCAGGCAAACACTCACTCAATCTGCCTCCCTCCA...CTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368702.5
CDS-3UTR GCA 90 bp AGGCTAGGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACAAGAGGGAGTTCTCAGTaGCCCCGGACAGGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: RLGYRVVVEETSFISRPTRGSSQ*PRTGLS
Trigger: GGAGAGGCCTGTCCGGGGGCACTGAGAACTCCCTCT...TGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCCTAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR GCA 90 bp CCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTGCACAGAGACCTGGGGAAAGAGATGAGGACAGGTaGAGGCTAGGGTACAGGGTG +
Preference number: 4 (lower is better)
Translates to: PPMSSPEHPRQSAQRPGERDEDR*RLGYRV
Trigger: CACCCTGTACCCTAGCCTGCACCTGTCCTCATCTCT...TTCCCCAGGTCTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR GCA 90 bp CCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCAAGGAAGCTGAACTTTaGAGAGATGAGGACAGGTGC +
Preference number: 4 (lower is better)
Translates to: PEPPSGGDSSTHELPRASKEAEL*RDEDRC
Trigger: GCACCTGTCCTCATCTCTGCAAAGTTCAGCTTCCTT...GGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp CCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCCTGGACAGACAGCTATaGTTTGGATTGGGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: PEPPSGGDSSTHELPRASLDRQL*FGLGKR
Trigger: TCTCTTCCCCAATCCAAACCATAGCTGTCTGTCCAG...GGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp GGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTGCACAGAGCCCTCTCCACATCACTaGATTCCTGAGCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: GDSSTHELPRASKTECTEPSPHH*IPEHPL
Trigger: CAGAGGATGCTCAGGAATTCAGTGATGTGGAGAGGG...CTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR GCA 90 bp GGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACAGTCTCTATGAGATGGGGCAGCTaGTGGGTGACCAGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: GYRVVVEETSFISRPTVSMRWGS*WVTRSR
Trigger: ACGGGACCTGGTCACCCAGCAGCTGCCCCATCTCAT...AGAGACTGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR GCA 90 bp GGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTGCACAGAGCCATCATTCTGTCAATaGCCAAGCACCCAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GDSSTHELPRASKTECTEPSFCQ*PSTQLV
Trigger: GACCAGCTGGGTGCTTGGGCATTGACAGAATGATGG...CTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp GGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTGCACAGAGGGTGCCCACTGTGTCTaGTCCTTTGGTGAGAGTTCT +
Preference number: 4 (lower is better)
Translates to: GDSSTHELPRASKTECTEGAHCV*SFGESS
Trigger: AGAACTCTCACCAAAGGACCAGACACAGTGGGCACC...CTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp GGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTGCACAGAGTGCAGCTGCCCAGGTTaGCAATTTTCTCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GDSSTHELPRASKTECTECSCPG*QFSLPG
Trigger: GCCTGGAAGAGAAAATTGCCAACCTGGGCAGCTGCA...CTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp AGGCTAGGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACAATCCTCTGCGTTGGCTaGCCGACACTGTCCCATGGT +
Preference number: 4 (lower is better)
Translates to: RLGYRVVVEETSFISRPTILCVG*PTLSHG
Trigger: ACCATGGGACAGTGTCGGTCAGCCAACGCAGAGGAT...TGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCCTAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp GGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTGCACAGAGTCCACGGAGTACTGGTaGAAGTTCTTGATGAGGGTC +
Preference number: 4 (lower is better)
Translates to: GDSSTHELPRASKTECTESTEYW*KFLMRV
Trigger: GACCCTCATCAAGAACTTTCACCAGTACTCCGTGGA...CTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp AAGAGAGCACTGGACAGACAGCTATGGTTTGGATTGGGGAAGAGATTAGGAAGTGGGGCAGCTGCTGGGTaGCCAGGTCCCGTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: KRALDRQLWFGLGKRLGSGAAAG*PGPVAQ
Trigger: CTGAGCTACGGGACCTGGTCACCCAGCAGCTGCCCC...ACTTCCTAATCTCTTCCCCAATCCAAACCATAGCTGTCTGTCCAGTGCTCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp AGGCTAGGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACAACCGACACTGTCCCATaGTGCCCACTGTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: RLGYRVVVEETSFISRPTTDTVP*CPLCLV
Trigger: GACCAGACACAGTGGGCACCATGGGACAGTGTCGGT...TGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCCTAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp GGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACAGTCTCTACCGACACTGTCCCATaGTGCCCACTGTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: GYRVVVEETSFISRPTVSTDTVP*CPLCLV
Trigger: GACCAGACACAGTGGGCACCATGGGACAGTGTCGGT...AGAGACTGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp GGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTGCACAGAGGCAGGAAGAGAGCACTaGACAGACAGCTATGGTTTG +
Preference number: 4 (lower is better)
Translates to: GDSSTHELPRASKTECTEAGREH*TDSYGL
Trigger: CAAACCATAGCTGTCTGTCCAGTGCTCTCTTCCTGC...CTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp AGGCTAGGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACAAGGAGCCAGCTCACCTaGGCTCAGCTCTTATACCAG +
Preference number: 4 (lower is better)
Translates to: RLGYRVVVEETSFISRPTRSQLT*AQLLYQ
Trigger: CTGGTATAAGAGCTGAGCTCAGGTGAGCTGGCTCCT...TGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCCTAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368702.5
CDS-3UTR GCA 90 bp AGGCTAGGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACAAGAGATGAGGACAGGTaGAGGCTAGGGTACAGGGTG +
Preference number: 4 (lower is better)
Translates to: RLGYRVVVEETSFISRPTRDEDR*RLGYRV
Trigger: CACCCTGTACCCTAGCCTGCACCTGTCCTCATCTCT...TGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCCTAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp CCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTGCACAGAGACCTGGGGAACTGGACAGACAGCTATaGTTTGGATTGGGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: PPMSSPEHPRQSAQRPGELDRQL*FGLGKR
Trigger: TCTCTTCCCCAATCCAAACCATAGCTGTCTGTCCAG...TTCCCCAGGTCTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp GGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTGCACAGAGTGTCTGGTCCTTTGGTaGGAGTTCTGTTGTCCTATA +
Preference number: 4 (lower is better)
Translates to: GDSSTHELPRASKTECTECLVLW*EFCCPI
Trigger: TATAGGACAACAGAACTCTCACCAAAGGACCAGACA...CTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp AGGCTAGGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACATGGCTCATGATCTGTTaGCAGCCGCTGAGACAAGAC +
Preference number: 4 (lower is better)
Translates to: RLGYRVVVEETSFISRPTWLMIC*QPLRQD
Trigger: GTCTTGTCTCAGCGGCTGCCAACAGATCATGAGCCA...TGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCCTAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344616.4
ENST00000368702.5
CDS-3UTR CCA 90 bp AAGAGAGCACTGGACAGACAGCTATGGTTTGGATTGGGGAAGAGATTAGGAAGTAGATGGGGCAGCTGCTaGGTGACCAGGTCCCGTAGC +
Preference number: 4 (lower is better)
Translates to: KRALDRQLWFGLGKRLGSRWGSC*VTRSRS
Trigger: GCTACGGGACCTGGTCACCCAGCAGCTGCCCCATCT...ACTTCCTAATCTCTTCCCCAATCCAAACCATAGCTGTCTGTCCAGTGCTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp GGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACAGTCTCTTGCAGCTGCCCAGGTTaGCAATTTTCTCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GYRVVVEETSFISRPTVSCSCPG*QFSLPG
Trigger: GCCTGGAAGAGAAAATTGCCAACCTGGGCAGCTGCA...AGAGACTGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp AGGCTAGGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACATGCAGCTGCCCAGGTTaGCAATTTTCTCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: RLGYRVVVEETSFISRPTCSCPG*QFSLPG
Trigger: GCCTGGAAGAGAAAATTGCCAACCTGGGCAGCTGCA...TGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCCTAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp GGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACAGTCTCTCCAGCTTCACACTCTTaGCCGCTTCTCCAATCAGCT +
Preference number: 4 (lower is better)
Translates to: GYRVVVEETSFISRPTVSPASHS*PLLQSA
Trigger: AGCTGATTGGAGAAGCGGCCAAGAGTGTGAAGCTGG...AGAGACTGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp CCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTGCACAGAGACCTGGGGAACAGACAGCTATGGTTTaGATTGGGGAAGAGATTAGG +
Preference number: 4 (lower is better)
Translates to: PPMSSPEHPRQSAQRPGEQTAMV*IGEEIR
Trigger: CCTAATCTCTTCCCCAATCCAAACCATAGCTGTCTG...TTCCCCAGGTCTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp AGGCTAGGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACAACATCACTGAATTCCTaGGCATCCTCTGCGTTGGCT +
Preference number: 4 (lower is better)
Translates to: RLGYRVVVEETSFISRPTTSLNS*ASSALA
Trigger: AGCCAACGCAGAGGATGCTCAGGAATTCAGTGATGT...TGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCCTAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp GGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACAGTCTCTACATCACTGAATTCCTaGGCATCCTCTGCGTTGGCT +
Preference number: 4 (lower is better)
Translates to: GYRVVVEETSFISRPTVSTSLNS*ASSALA
Trigger: AGCCAACGCAGAGGATGCTCAGGAATTCAGTGATGT...AGAGACTGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp GGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACAGTCTCTTCCACGGAGTACTGGTaGAAGTTCTTGATGAGGGTC +
Preference number: 4 (lower is better)
Translates to: GYRVVVEETSFISRPTVSSTEYW*KFLMRV
Trigger: GACCCTCATCAAGAACTTTCACCAGTACTCCGTGGA...AGAGACTGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR GCA 90 bp AAGAGAGCACTGGACAGACAGCTATGGTTTGGATTGGGGAAGAGATTAGGAAGTATGAGATGGGGCAGCTaGTGGGTGACCAGGTCCCGT +
Preference number: 4 (lower is better)
Translates to: KRALDRQLWFGLGKRLGSMRWGS*WVTRSR
Trigger: ACGGGACCTGGTCACCCAGCAGCTGCCCCATCTCAT...ACTTCCTAATCTCTTCCCCAATCCAAACCATAGCTGTCTGTCCAGTGCTCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp GGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACAGTCTCTGCAGGAAGAGAGCACTaGACAGACAGCTATGGTTTG +
Preference number: 4 (lower is better)
Translates to: GYRVVVEETSFISRPTVSAGREH*TDSYGL
Trigger: CAAACCATAGCTGTCTGTCCAGTGCTCTCTTCCTGC...AGAGACTGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp AAGAGAGCACTGGACAGACAGCTATGGTTTGGATTGGGGAAGAGATTAGGAAGTACCGACACTGTCCCATaGTGCCCACTGTGTCTGGTC +
Preference number: 4 (lower is better)
Translates to: KRALDRQLWFGLGKRLGSTDTVP*CPLCLV
Trigger: GACCAGACACAGTGGGCACCATGGGACAGTGTCGGT...ACTTCCTAATCTCTTCCCCAATCCAAACCATAGCTGTCTGTCCAGTGCTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp AAGAGAGCACTGGACAGACAGCTATGGTTTGGATTGGGGAAGAGATTAGGAAGTGAGCATCCTCTGCGTTaGCTGACCGACACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: KRALDRQLWFGLGKRLGSEHPLR*LTDTVP
Trigger: TGGGACAGTGTCGGTCAGCCAACGCAGAGGATGCTC...ACTTCCTAATCTCTTCCCCAATCCAAACCATAGCTGTCTGTCCAGTGCTCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp AGGCTAGGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACACCTAAGTGTGCCCTCTaGACAGCAGGCAGTATATTT +
Preference number: 4 (lower is better)
Translates to: RLGYRVVVEETSFISRPTPKCAL*TAGSIF
Trigger: AAATATACTGCCTGCTGTCCAGAGGGCACACTTAGG...TGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCCTAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368701.5
CDS-3UTR CCA 90 bp GGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACAGTCTCTCAGACAGCTATGGTTTaGATTGGGGAAGAGATTAGG +
Preference number: 4 (lower is better)
Translates to: GYRVVVEETSFISRPTVSQTAMV*IGEEIR
Trigger: CCTAATCTCTTCCCCAATCCAAACCATAGCTGTCTG...AGAGACTGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp AAGAGAGCACTGGACAGACAGCTATGGTTTGGATTGGGGAAGAGATTAGGAAGTCCCTCTCCACATCACTaGATTCCTGAGCATCCTCTG +
Preference number: 4 (lower is better)
Translates to: KRALDRQLWFGLGKRLGSPSPHH*IPEHPL
Trigger: CAGAGGATGCTCAGGAATTCAGTGATGTGGAGAGGG...ACTTCCTAATCTCTTCCCCAATCCAAACCATAGCTGTCTGTCCAGTGCTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR GCA 90 bp AAGAGAGCACTGGACAGACAGCTATGGTTTGGATTGGGGAAGAGATTAGGAAGTCCATCATTCTGTCAATaGCCAAGCACCCAGCTGGTC +
Preference number: 4 (lower is better)
Translates to: KRALDRQLWFGLGKRLGSPSFCQ*PSTQLV
Trigger: GACCAGCTGGGTGCTTGGGCATTGACAGAATGATGG...ACTTCCTAATCTCTTCCCCAATCCAAACCATAGCTGTCTGTCCAGTGCTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp AAGAGAGCACTGGACAGACAGCTATGGTTTGGATTGGGGAAGAGATTAGGAAGTCCAGCTTCACACTCTTaGCCGCTTCTCCAATCAGCT +
Preference number: 4 (lower is better)
Translates to: KRALDRQLWFGLGKRLGSPASHS*PLLQSA
Trigger: AGCTGATTGGAGAAGCGGCCAAGAGTGTGAAGCTGG...ACTTCCTAATCTCTTCCCCAATCCAAACCATAGCTGTCTGTCCAGTGCTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp AGGCTAGGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACAAGCAGGCAGTATATTTaGGTGAAAAGCCTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: RLGYRVVVEETSFISRPTSRQYI*VKSLGF
Trigger: AAACCCAAGGCTTTTCACCCAAATATACTGCCTGCT...TGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCCTAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368701.5
CDS-3UTR TCA 90 bp AAGAGAGCACTGGACAGACAGCTATGGTTTGGATTGGGGAAGAGATTAGGAAGTACATCACTGAATTCCTaGGCATCCTCTGCGTTGGCT +
Preference number: 4 (lower is better)
Translates to: KRALDRQLWFGLGKRLGSTSLNS*ASSALA
Trigger: AGCCAACGCAGAGGATGCTCAGGAATTCAGTGATGT...ACTTCCTAATCTCTTCCCCAATCCAAACCATAGCTGTCTGTCCAGTGCTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp AAGAGAGCACTGGACAGACAGCTATGGTTTGGATTGGGGAAGAGATTAGGAAGTTCCACGGAGTACTGGTaGAAGTTCTTGATGAGGGTC +
Preference number: 4 (lower is better)
Translates to: KRALDRQLWFGLGKRLGSSTEYW*KFLMRV
Trigger: GACCCTCATCAAGAACTTTCACCAGTACTCCGTGGA...ACTTCCTAATCTCTTCCCCAATCCAAACCATAGCTGTCTGTCCAGTGCTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CCA 90 bp AAGAGAGCACTGGACAGACAGCTATGGTTTGGATTGGGGAAGAGATTAGGAAGTCTGGACAGACAGCTATaGTTTGGATTGGGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: KRALDRQLWFGLGKRLGSLDRQL*FGLGKR
Trigger: TCTCTTCCCCAATCCAAACCATAGCTGTCTGTCCAG...ACTTCCTAATCTCTTCCCCAATCCAAACCATAGCTGTCTGTCCAGTGCTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR TCA 90 bp AAGAGAGCACTGGACAGACAGCTATGGTTTGGATTGGGGAAGAGATTAGGAAGTTGTCTGGTCCTTTGGTaGGAGTTCTGTTGTCCTATA +
Preference number: 4 (lower is better)
Translates to: KRALDRQLWFGLGKRLGSCLVLW*EFCCPI
Trigger: TATAGGACAACAGAACTCTCACCAAAGGACCAGACA...ACTTCCTAATCTCTTCCCCAATCCAAACCATAGCTGTCTGTCCAGTGCTCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
3UTR CAA 72 bp AGGAAGAGAGCACTGGACAGACAGCTATGGTTTGGATaGGGGAAGAGATTAGGAAGTAGGTTCTTAAAGACC +
Preference number: 4 (lower is better)
Translates to: RKRALDRQLWFG*GKRLGSRFLKT
Trigger: GGTCTTTAAGAACCTACTTCCTAATCTCTTCCCCAATCCAAACCATAGCTGTCTGTCCAGTGCTCTCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS CCA 90 bp TTCTCTTCCAGGCCACAGTTGCTCGGCATGAGATGGGGCAGCTGCTaGGTGACCAGGTCCCGTAGCTCAGAAGGGGTCAGCGTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: FSSRPQLLGMRWGSC*VTRSRSSEGVSVSF
Trigger: GAAGGAGACGCTGACCCCTTCTGAGCTACGGGACCTGGTCACCCAGCAGCTGCCCCATCTCATGCCGAGCAACTGTGGCCTGGAAGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344616.4
ENST00000368700.7
ENST00000368701.5
ENST00000368702.5
ENST00000469571.1
ENST00000476873.5
CDS-3UTR CAA 90 bp CCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCTCCAGCTTCACACTCTaGGCCGCTTCTCCAATCAGC +
Preference number: 5 (lower is better)
Translates to: PEPPSGGDSSTHELPRASSSFTL*AASPIS
Trigger: GCTGATTGGAGAAGCGGCCAAGAGTGTGAAGCTGGA...GGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CAA 90 bp AGTCCCCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGTTGGTGAGAGTTCTGTaGTCCTATAGCTGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: SPLSLPLVETPPPMSSPELVRVL*SYSWPQ
Trigger: CTGGGGCCAGCTATAGGACAACAGAACTCTCACCAA...CTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGGGGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CAA 90 bp CCTGAGCCTCCCTCTGGTGGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCTCCAGTTTAGAGTCATaGCAGCTGCCCAGGTTGGCA +
Preference number: 5 (lower is better)
Translates to: PEPPSGGDSSTHELPRASSSLES*QLPRLA
Trigger: TGCCAACCTGGGCAGCTGCAATGACTCTAAACTGGA...GGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCCACCAGAGGGAGGCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CAA 90 bp CCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTGCACAGAGACCTGGGGAATCCAGCTTCACACTCTaGGCCGCTTCTCCAATCAGC +
Preference number: 5 (lower is better)
Translates to: PPMSSPEHPRQSAQRPGESSFTL*AASPIS
Trigger: GCTGATTGGAGAAGCGGCCAAGAGTGTGAAGCTGGA...TTCCCCAGGTCTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CAA 90 bp GGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTGCACAGAGATGGCTCATGATCTGTaGGCAGCCGCTGAGACAAGA +
Preference number: 5 (lower is better)
Translates to: GDSSTHELPRASKTECTEMAHDL*AAAETR
Trigger: TCTTGTCTCAGCGGCTGCCAACAGATCATGAGCCAT...CTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344616.4
ENST00000368702.5
CDS-3UTR CAA 90 bp GGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTGCACAGAGTTGCAGCTGCCCAGGTaGGCAATTTTCTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: GDSSTHELPRASKTECTELQLPR*AIFSSR
Trigger: CCTGGAAGAGAAAATTGCCAACCTGGGCAGCTGCAA...CTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CAA 90 bp CCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTGCACAGAGACCTGGGGAATCCAGTTTAGAGTCATaGCAGCTGCCCAGGTTGGCA +
Preference number: 5 (lower is better)
Translates to: PPMSSPEHPRQSAQRPGESSLES*QLPRLA
Trigger: TGCCAACCTGGGCAGCTGCAATGACTCTAAACTGGA...TTCCCCAGGTCTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CAA 90 bp GGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTGCACAGAGAGATTGAGTGAGTGTTaGCCTGACCTCCCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: GDSSTHELPRASKTECTERLSEC*PDLPSA
Trigger: AGCTGAAGGGAGGTCAGGCAAACACTCACTCAATCT...CTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368702.5
CDS-3UTR CAA 90 bp GGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACAGTCTCTTCCAGCTTCACACTCTaGGCCGCTTCTCCAATCAGC +
Preference number: 5 (lower is better)
Translates to: GYRVVVEETSFISRPTVSSSFTL*AASPIS
Trigger: GCTGATTGGAGAAGCGGCCAAGAGTGTGAAGCTGGA...AGAGACTGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CAA 90 bp AGGCTAGGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACAATGGCTCATGATCTGTaGGCAGCCGCTGAGACAAGA +
Preference number: 5 (lower is better)
Translates to: RLGYRVVVEETSFISRPTMAHDL*AAAETR
Trigger: TCTTGTCTCAGCGGCTGCCAACAGATCATGAGCCAT...TGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCCTAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344616.4
ENST00000368702.5
CDS-3UTR CAA 90 bp AGGCTAGGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACATTGGTGAGAGTTCTGTaGTCCTATAGCTGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: RLGYRVVVEETSFISRPTLVRVL*SYSWPQ
Trigger: CTGGGGCCAGCTATAGGACAACAGAACTCTCACCAA...TGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCCTAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CAA 90 bp GGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACAGTCTCTTTGGTGAGAGTTCTGTaGTCCTATAGCTGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: GYRVVVEETSFISRPTVSLVRVL*SYSWPQ
Trigger: CTGGGGCCAGCTATAGGACAACAGAACTCTCACCAA...AGAGACTGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CAA 90 bp GGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACAGTCTCTTTGCAGCTGCCCAGGTaGGCAATTTTCTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: GYRVVVEETSFISRPTVSLQLPR*AIFSSR
Trigger: CCTGGAAGAGAAAATTGCCAACCTGGGCAGCTGCAA...AGAGACTGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CAA 90 bp AGGCTAGGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACATTGCAGCTGCCCAGGTaGGCAATTTTCTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: RLGYRVVVEETSFISRPTLQLPR*AIFSSR
Trigger: CCTGGAAGAGAAAATTGCCAACCTGGGCAGCTGCAA...TGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCCTAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CAA 90 bp GGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACAGTCTCTTCCAGTTTAGAGTCATaGCAGCTGCCCAGGTTGGCA +
Preference number: 5 (lower is better)
Translates to: GYRVVVEETSFISRPTVSSSLES*QLPRLA
Trigger: TGCCAACCTGGGCAGCTGCAATGACTCTAAACTGGA...AGAGACTGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CAA 90 bp GGAGACTCCTCCACCCATGAGCTCCCCAGAGCATCCAAGACAGAGTGCACAGAGCAGCTATGGTTTGGATaGGGGAAGAGATTAGGAAGT +
Preference number: 5 (lower is better)
Translates to: GDSSTHELPRASKTECTEQLWFG*GKRLGS
Trigger: ACTTCCTAATCTCTTCCCCAATCCAAACCATAGCTG...CTCTGTGCACTCTGTCTTGGATGCTCTGGGGAGCTCATGGGTGGAGGAGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CAA 90 bp AGGCTAGGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACAACTGTGTCTGGTCCTTaGGTGAGAGTTCTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: RLGYRVVVEETSFISRPTTVSGP*VRVLLS
Trigger: GGACAACAGAACTCTCACCAAAGGACCAGACACAGT...TGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCCTAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CAA 90 bp AAGAGAGCACTGGACAGACAGCTATGGTTTGGATTGGGGAAGAGATTAGGAAGTTCCAGCTTCACACTCTaGGCCGCTTCTCCAATCAGC +
Preference number: 5 (lower is better)
Translates to: KRALDRQLWFGLGKRLGSSSFTL*AASPIS
Trigger: GCTGATTGGAGAAGCGGCCAAGAGTGTGAAGCTGGA...ACTTCCTAATCTCTTCCCCAATCCAAACCATAGCTGTCTGTCCAGTGCTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CAA 90 bp GGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACAGTCTCTCAGCTATGGTTTGGATaGGGGAAGAGATTAGGAAGT +
Preference number: 5 (lower is better)
Translates to: GYRVVVEETSFISRPTVSQLWFG*GKRLGS
Trigger: ACTTCCTAATCTCTTCCCCAATCCAAACCATAGCTG...AGAGACTGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CAA 90 bp GGGTACAGGGTGGTGGTAGAGGAGACAAGTTTTATCTCCAGGCCCACAGTCTCTATGAATGTAGAGAACTaGGATCAGGAGGAAGCCAGA +
Preference number: 5 (lower is better)
Translates to: GYRVVVEETSFISRPTVSMNVEN*DQEEAR
Trigger: TCTGGCTTCCTCCTGATCCAAGTTCTCTACATTCAT...AGAGACTGTGGGCCTGGAGATAAAACTTGTCTCCTCTACCACCACCCTGTACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368702.5
CDS-3UTR CAA 90 bp AAGAGAGCACTGGACAGACAGCTATGGTTTGGATTGGGGAAGAGATTAGGAAGTTTGCAGCTGCCCAGGTaGGCAATTTTCTCTTCCAGG +
Preference number: 5 (lower is better)
Translates to: KRALDRQLWFGLGKRLGSLQLPR*AIFSSR
Trigger: CCTGGAAGAGAAAATTGCCAACCTGGGCAGCTGCAA...ACTTCCTAATCTCTTCCCCAATCCAAACCATAGCTGTCTGTCCAGTGCTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS-3UTR CAA 90 bp AAGAGAGCACTGGACAGACAGCTATGGTTTGGATTGGGGAAGAGATTAGGAAGTACTGTGTCTGGTCCTTaGGTGAGAGTTCTGTTGTCC +
Preference number: 5 (lower is better)
Translates to: KRALDRQLWFGLGKRLGSTVSGP*VRVLLS
Trigger: GGACAACAGAACTCTCACCAAAGGACCAGACACAGT...ACTTCCTAATCTCTTCCCCAATCCAAACCATAGCTGTCTGTCCAGTGCTCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000344616.4
ENST00000368701.5
ENST00000368702.5
ENST00000476873.5
CDS CCA 72 bp AGGCCACAGTTGCTCGGCATGAGATGGGGCAGCTGCTaGGTGACCAGGTCCCGTAGCTCAGAAGGGGTCAGC +
Preference number: 6 (lower is better)
Translates to: RPQLLGMRWGSC*VTRSRSSEGVS
Trigger: GCTGACCCCTTCTGAGCTACGGGACCTGGTCACCCAGCAGCTGCCCCATCTCATGCCGAGCAACTGTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000344616.4
ENST00000368700.7
ENST00000368701.5
ENST00000368702.5
ENST00000469571.1
ENST00000476873.5
CDS TCA 72 bp AGAGTTCTGTTGTCCTATAGCTGGCCCCAGAGGAGCTaGTGGCTCATGATCTGTTGGCAGCCGCTGAGACAA +
Preference number: 6 (lower is better)
Translates to: RVLLSYSWPQRS*WLMICWQPLRQ
Trigger: TTGTCTCAGCGGCTGCCAACAGATCATGAGCCATCAGCTCCTCTGGGGCCAGCTATAGGACAACAGAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344616.4
ENST00000368702.5
CDS TCA 72 bp AGAGTTCTGTTGTCCTATAGCTGGCCCCAGAGGAGCTaGTGGCTCATGATCCTAAGTGTGCCCTCTGGACAG +
Preference number: 6 (lower is better)
Translates to: RVLLSYSWPQRS*WLMILSVPSGQ
Trigger: CTGTCCAGAGGGCACACTTAGGATCATGAGCCATCAGCTCCTCTGGGGCCAGCTATAGGACAACAGAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368700.7
ENST00000368701.5
CDS TCA 72 bp AGAGTTCTGTTGTCCTATAGCTGGCCCCAGAGGAGCTaGTGGCTCATGATCAGTCCTGGAGGCAGAGAGATG +
Preference number: 6 (lower is better)
Translates to: RVLLSYSWPQRS*WLMISPGGREM
Trigger: CATCTCTCTGCCTCCAGGACTGATCATGAGCCATCAGCTCCTCTGGGGCCAGCTATAGGACAACAGAACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469571.1
CDS CAA 90 bp TCTCCAATCAGCTCCCAGAAACTCCTGAACTCCAGTTTAGAGTCATaGCAGCTGCCCAGGTTGGCAATTTTCTCTTCCAGGCCACAGTTG +
Preference number: 6 (lower is better)
Translates to: SPISSQKLLNSSLES*QLPRLAIFSSRPQL
Trigger: CAACTGTGGCCTGGAAGAGAAAATTGCCAACCTGGGCAGCTGCAATGACTCTAAACTGGAGTTCAGGAGTTTCTGGGAGCTGATTGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344616.4
ENST00000368700.7
ENST00000368701.5
ENST00000368702.5
ENST00000469571.1
ENST00000476873.5
CDS CAA 72 bp AGCTCCCAGAAACTCCTGAACTCCAGTTTAGAGTCATaGCAGCTGCCCAGGTTGGCAATTTTCTCTTCCAGG +
Preference number: 6 (lower is better)
Translates to: SSQKLLNSSLES*QLPRLAIFSSR
Trigger: CCTGGAAGAGAAAATTGCCAACCTGGGCAGCTGCAATGACTCTAAACTGGAGTTCAGGAGTTTCTGGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000344616.4
ENST00000368700.7
ENST00000368701.5
ENST00000368702.5
ENST00000469571.1
ENST00000476873.5