Pregenerated sensors for RYK (Homo sapiens)
Ensembl gene IDs: ENSG00000163785Ensembl transcript IDs: ENST00000460933.5, ENST00000464879.1, ENST00000473208.5, ENST00000484106.3, ENST00000486725.1, ENST00000620660.4, ENST00000623711.4
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCACCTCTGGCCTGTGATTCATCTCTGACATCACTGCAGCCTCCCTaGAAGGAGGACGTTCTGTTGAAGAAGGGGCAGCACCCTTGGTGG | + |
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Preference number: 1 (lower is better) Translates to: SPLACDSSLTSLQPP*KEDVLLKKGQHPWW Trigger: CCACCAAGGGTGCTGCCCCTTCTTCAACAGAACGTCCTCCTTGCAGGGAGGCTGCAGTGATGTCAGAGATGAATCACAGGCCAGAGGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR CCA 90 bp | AGCTGGAGAGCGATTTCCCAGTCTGTAATGACCACTCCCAGGGACTaGGAGAGTTTCCCTTTCTCCAGCTCTCACCTCTGGCCTGTGATT | + |
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Preference number: 1 (lower is better) Translates to: SWRAISQSVMTTPRD*ESFPFSSSHLWPVI Trigger: AATCACAGGCCAGAGGTGAGAGCTGGAGAAAGGGAAACTCTCCCAGTCCCTGGGAGTGGTCATTACAGACTGGGAAATCGCTCTCCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR CCA 90 bp | AGGATCAAGGGTACCTGGAGACAGAGCCTGGCTCTGGATGGCTTGTaGACCATCTCTCTAGAAAAATGCACTCTTGTCCACAACTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: RIKGTWRQSLALDGL*TISLEKCTLVHNSA Trigger: AGCAGAGTTGTGGACAAGAGTGCATTTTTCTAGAGAGATGGTCCACAAGCCATCCAGAGCCAGGCTCTGTCTCCAGGTACCCTTGATCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR GCA 90 bp | TTTCTGGTGCCCGCACAGTGCCTGGCCCTGGTAAGAGCTTGTACATaGTTATTGAACCACGTGGCTGGAAGAATAAAGGGAAACTTTTCC | + |
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Preference number: 1 (lower is better) Translates to: FLVPAQCLALVRACT*LLNHVAGRIKGNFS Trigger: GGAAAAGTTTCCCTTTATTCTTCCAGCCACGTGGTTCAATAAGCATGTACAAGCTCTTACCAGGGCCAGGCACTGTGCGGGCACCAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR-3UTR TCA 90 bp | GAGGTCTCCAAGGATCAAGGGTACCTGGAGACAGAGCCTGGCTCTGGATGGCTTACTGGGCACTGCCCCTaGACAGGTCTCTTTTCACCC | + |
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Preference number: 2 (lower is better) Translates to: EVSKDQGYLETEPGSGWLTGHCP*TGLFSP Trigger: GGGTGAAAAGAGACCTGTTCAGGGGCAGTGCCCAGT...AAGCCATCCAGAGCCAGGCTCTGTCTCCAGGTACCCTTGATCCTTGGAGACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR CAA 90 bp | GCCTCCCTGCAAGGAGGACGTTCTGTTGAAGAAGGGGCAGCACCCTaGGTGGCATTGTACAAAGGCTTGAGGGACTCTGCCTCTCGTTTG | + |
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Preference number: 2 (lower is better) Translates to: ASLQGGRSVEEGAAP*VALYKGLRDSASRL Trigger: CAAACGAGAGGCAGAGTCCCTCAAGCCTTTGTACAATGCCACCAAGGGTGCTGCCCCTTCTTCAACAGAACGTCCTCCTTGCAGGGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR-3UTR TCA 90 bp | GTCTCCAAGGATCAAGGGTACCTGGAGACAGAGCCTGGCTCTGGATGGCTTGTGAGGAGGACGTTCTGTTaGAGAAGGGGCAGCACCCTT | + |
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Preference number: 2 (lower is better) Translates to: VSKDQGYLETEPGSGWLVRRTFC*RRGSTL Trigger: AAGGGTGCTGCCCCTTCTTCAACAGAACGTCCTCCT...CACAAGCCATCCAGAGCCAGGCTCTGTCTCCAGGTACCCTTGATCCTTGGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR CAA 90 bp | CCCTTGGTGGCATTGTACAAAGGCTTGAGGGACTCTGCCTCTCGTTaGAGGGTCTCCTCACTGGGCACTGCCCCTGAACAGGTCTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: PLVALYKGLRDSASR*RVSSLGTAPEQVSF Trigger: AAAAGAGACCTGTTCAGGGGCAGTGCCCAGTGAGGAGACCCTCAAACGAGAGGCAGAGTCCCTCAAGCCTTTGTACAATGCCACCAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR CAA 90 bp | TCTGTTGAAGAAGGGGCAGCACCCTTGGTGGCATTGTACAAAGGCTaGAGGGACTCTGCCTCTCGTTTGAGGGTCTCCTCACTGGGCACT | + |
|
Preference number: 2 (lower is better) Translates to: SVEEGAAPLVALYKG*RDSASRLRVSSLGT Trigger: AGTGCCCAGTGAGGAGACCCTCAAACGAGAGGCAGAGTCCCTCAAGCCTTTGTACAATGCCACCAAGGGTGCTGCCCCTTCTTCAACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR CAA 90 bp | CAAGGAGGACGTTCTGTTGAAGAAGGGGCAGCACCCTTGGTGGCATaGTACAAAGGCTTGAGGGACTCTGCCTCTCGTTTGAGGGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: QGGRSVEEGAAPLVA*YKGLRDSASRLRVS Trigger: GGAGACCCTCAAACGAGAGGCAGAGTCCCTCAAGCCTTTGTACAATGCCACCAAGGGTGCTGCCCCTTCTTCAACAGAACGTCCTCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR-3UTR CCA 90 bp | GGTGCCCGCACAGTGCCTGGCCCTGGTAAGAGCTTGTACATGCTTATTGAACCAACCACTCCCAGGGACTaGGAGAGTTTCCCTTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: GARTVPGPGKSLYMLIEPTTPRD*ESFPFS Trigger: GGAGAAAGGGAAACTCTCCCAGTCCCTGGGAGTGGT...TGGTTCAATAAGCATGTACAAGCTCTTACCAGGGCCAGGCACTGTGCGGGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR-3UTR TCA 90 bp | GTCTCCAAGGATCAAGGGTACCTGGAGACAGAGCCTGGCTCTGGATGGCTTGTGCATTGTACAAAGGCTTaGGGGACTCTGCCTCTCGTT | + |
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Preference number: 2 (lower is better) Translates to: VSKDQGYLETEPGSGWLVHCTKA*GTLPLV Trigger: AACGAGAGGCAGAGTCCCTCAAGCCTTTGTACAATG...CACAAGCCATCCAGAGCCAGGCTCTGTCTCCAGGTACCCTTGATCCTTGGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR-3UTR GCA 90 bp | CTGGAGAGCGATTTCCCAGTCTGTAATGACCACTCCCAGGGACTGGGAGAGTTTTCACTGCAGCCTCCCTaGAAGGAGGACGTTCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: LESDFPVCNDHSQGLGEFSLQPP*KEDVLL Trigger: CAACAGAACGTCCTCCTTGCAGGGAGGCTGCAGTGA...AAACTCTCCCAGTCCCTGGGAGTGGTCATTACAGACTGGGAAATCGCTCTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR-3UTR TCA 90 bp | TACCATCAGCTGGAGAGCGATTTCCCAGTCTGTAATGACCACTCCCAGGGACTGCCTGTGATTCATCTCTaGCATCACTGCAGCCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: YHQLESDFPVCNDHSQGLPVIHL*HHCSLP Trigger: AGGGAGGCTGCAGTGATGTCAGAGATGAATCACAGG...CAGTCCCTGGGAGTGGTCATTACAGACTGGGAAATCGCTCTCCAGCTGATGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR-3UTR GCA 90 bp | CTGGATGGCTTGTGGACCATCTCTCTAGAAAAATGCACTCTTGTCCACAACTCTCTGGTGCCCGCACAGTaGCTGGCCCTGGTAAGAGCT | + |
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Preference number: 2 (lower is better) Translates to: LDGLWTISLEKCTLVHNSLVPAQ*LALVRA Trigger: AGCTCTTACCAGGGCCAGGCACTGTGCGGGCACCAG...AGAGTTGTGGACAAGAGTGCATTTTTCTAGAGAGATGGTCCACAAGCCATCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR CAA 90 bp | CCAAGGATCAAGGGTACCTGGAGACAGAGCCTGGCTCTGGATGGCTaGTGGACCATCTCTCTAGAAAAATGCACTCTTGTCCACAACTCT | + |
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Preference number: 2 (lower is better) Translates to: PRIKGTWRQSLALDG*WTISLEKCTLVHNS Trigger: AGAGTTGTGGACAAGAGTGCATTTTTCTAGAGAGATGGTCCACAAGCCATCCAGAGCCAGGCTCTGTCTCCAGGTACCCTTGATCCTTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR CAA 90 bp | GTGCCCGCACAGTGCCTGGCCCTGGTAAGAGCTTGTACATGCTTATaGAACCACGTGGCTGGAAGAATAAAGGGAAACTTTTCCCTTCTA | + |
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Preference number: 2 (lower is better) Translates to: VPAQCLALVRACTCL*NHVAGRIKGNFSLL Trigger: TAGAAGGGAAAAGTTTCCCTTTATTCTTCCAGCCACGTGGTTCAATAAGCATGTACAAGCTCTTACCAGGGCCAGGCACTGTGCGGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR-3UTR TCA 90 bp | TACAAAGGCTTGAGGGACTCTGCCTCTCGTTTGAGGGTCTCCTCACTGGGCACTTCCAAATATGGCAACTaGGCTTATTCACTTCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: YKGLRDSASRLRVSSLGTSKYGN*AYSLPV Trigger: CACTGGAAGTGAATAAGCTCAGTTGCCATATTTGGA...AGTGCCCAGTGAGGAGACCCTCAAACGAGAGGCAGAGTCCCTCAAGCCTTTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR-3UTR TCA 90 bp | CAGACAGTGATAGTCCATGGGGAACAAGTCTCTGGAGAGGGCATTGTCTGTGATGAAGTGTGTCATCAATaGCACAGTTCCTGGCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: QTVIVHGEQVSGEGIVCDEVCHQ*HSSWQP Trigger: TGGCTGCCAGGAACTGTGTCATTGATGACACACTTC...ATCACAGACAATGCCCTCTCCAGAGACTTGTTCCCCATGGACTATCACTGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486725.1 |
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| 3UTR-3UTR GCA 90 bp | GAGACAGAGCCTGGCTCTGGATGGCTTGTGGACCATCTCTCTAGAAAAATGCACGTAAGAGCTTGTACATaGTTATTGAACCACGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: ETEPGSGWLVDHLSRKMHVRACT*LLNHVA Trigger: AGCCACGTGGTTCAATAAGCATGTACAAGCTCTTAC...GTGCATTTTTCTAGAGAGATGGTCCACAAGCCATCCAGAGCCAGGCTCTGTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR-3UTR CCA 90 bp | CTGGATGGCTTGTGGACCATCTCTCTAGAAAAATGCACTCTTGTCCACAACTCTGCTTCATCCAGCTGTTaGAGTCAGAAGAGCAGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: LDGLWTISLEKCTLVHNSASSSC*SQKSSQ Trigger: TTGGCTGCTCTTCTGACTCCAACAGCTGGATGAAGC...AGAGTTGTGGACAAGAGTGCATTTTTCTAGAGAGATGGTCCACAAGCCATCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR-3UTR CCA 90 bp | TGTACATGCTTATTGAACCACGTGGCTGGAAGAATAAAGGGAAACTTTTCCCTTCTTATTCACTTCCAGTaGGGCTCCTGTAGGACAAGA | + |
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Preference number: 2 (lower is better) Translates to: CTCLLNHVAGRIKGNFSLLIHFQ*GSCRTR Trigger: TCTTGTCCTACAGGAGCCCCACTGGAAGTGAATAAG...AAGGGAAAAGTTTCCCTTTATTCTTCCAGCCACGTGGTTCAATAAGCATGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR-3UTR CAA 90 bp | GTCTCCAAGGATCAAGGGTACCTGGAGACAGAGCCTGGCTCTGGATGGCTTGTGGACTCTGCCTCTCGTTaGAGGGTCTCCTCACTGGGC | + |
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Preference number: 3 (lower is better) Translates to: VSKDQGYLETEPGSGWLVDSASR*RVSSLG Trigger: GCCCAGTGAGGAGACCCTCAAACGAGAGGCAGAGTC...CACAAGCCATCCAGAGCCAGGCTCTGTCTCCAGGTACCCTTGATCCTTGGAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR-3UTR CAA 90 bp | CTCCAAGGATCAAGGGTACCTGGAGACAGAGCCTGGCTCTGGATGGCTTGTGGAGCACCCTTGGTGGCATaGTACAAAGGCTTGAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: LQGSRVPGDRAWLWMACGAPLVA*YKGLRD Trigger: GTCCCTCAAGCCTTTGTACAATGCCACCAAGGGTGC...TCCACAAGCCATCCAGAGCCAGGCTCTGTCTCCAGGTACCCTTGATCCTTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR-3UTR CAA 90 bp | CCCGCACAGTGCCTGGCCCTGGTAAGAGCTTGTACATGCTTATTGAACCACGTGGAAGGGGCAGCACCCTaGGTGGCATTGTACAAAGGC | + |
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Preference number: 3 (lower is better) Translates to: PAQCLALVRACTCLLNHVEGAAP*VALYKG Trigger: GCCTTTGTACAATGCCACCAAGGGTGCTGCCCCTTC...CACGTGGTTCAATAAGCATGTACAAGCTCTTACCAGGGCCAGGCACTGTGCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR GCA 72 bp | CCCGCACAGTGCCTGGCCCTGGTAAGAGCTTGTACATaGTTATTGAACCACGTGGCTGGAAGAATAAAGGGA | + |
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Preference number: 3 (lower is better) Translates to: PAQCLALVRACT*LLNHVAGRIKG Trigger: TCCCTTTATTCTTCCAGCCACGTGGTTCAATAAGCATGTACAAGCTCTTACCAGGGCCAGGCACTGTGCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR CCA 72 bp | GGTACCTGGAGACAGAGCCTGGCTCTGGATGGCTTGTaGACCATCTCTCTAGAAAAATGCACTCTTGTCCAC | + |
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Preference number: 3 (lower is better) Translates to: GTWRQSLALDGL*TISLEKCTLVH Trigger: GTGGACAAGAGTGCATTTTTCTAGAGAGATGGTCCACAAGCCATCCAGAGCCAGGCTCTGTCTCCAGGTACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR-3UTR CAA 90 bp | AGACAGAGCCTGGCTCTGGATGGCTTGTGGACCATCTCTCTAGAAAAATGCACTGCATTGTACAAAGGCTaGAGGGACTCTGCCTCTCGT | + |
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Preference number: 3 (lower is better) Translates to: RQSLALDGLWTISLEKCTALYKG*RDSASR Trigger: ACGAGAGGCAGAGTCCCTCAAGCCTTTGTACAATGC...AGTGCATTTTTCTAGAGAGATGGTCCACAAGCCATCCAGAGCCAGGCTCTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR CCA 72 bp | GGTCCAAATATGGCAACTGAGCTTATTCACTTCCAGTaGGGCTCCTGTAGGACAAGAATAGGCTTCATCCAG | + |
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Preference number: 3 (lower is better) Translates to: GPNMATELIHFQ*GSCRTRIGFIQ Trigger: CTGGATGAAGCCTATTCTTGTCCTACAGGAGCCCCACTGGAAGTGAATAAGCTCAGTTGCCATATTTGGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR-3UTR CAA 90 bp | GTCCTTTACCATCAGCTGGAGAGCGATTTCCCAGTCTGTAATGACCACTCCCAGTCAAATGTGAGAATTTaGGTCCAAATATGGCAACTG | + |
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Preference number: 3 (lower is better) Translates to: VLYHQLESDFPVCNDHSQSNVRI*VQIWQL Trigger: CAGTTGCCATATTTGGACCAAAATTCTCACATTTGA...CTGGGAGTGGTCATTACAGACTGGGAAATCGCTCTCCAGCTGATGGTAAAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| CDS-3UTR GCA 90 bp | CAAAGCATCCCTGACAGGCTTCAAGTGAGCCCCGACAGGCACCTTCTTCCTGATCCGCCGCCTCCTCGCTaGATCGTCCGGAGTTGGGGG | + |
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Preference number: 4 (lower is better) Translates to: QSIPDRLQVSPDRHLLPDPPPPR*IVRSWG Trigger: CCCCCAACTCCGGACGATGCAGCGAGGAGGCGGCGG...ATCAGGAAGAAGGTGCCTGTCGGGGCTCACTTGAAGCCTGTCAGGGATGCTTTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000623711.4 |
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| CDS-3UTR CCA 90 bp | CAAAGCATCCCTGACAGGCTTCAAGTGAGCCCCGACAGGCACCTTCTTCCTGATGGTAGAGACTCACGCTaGGCCCCGCGGAAGCCGACT | + |
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Preference number: 4 (lower is better) Translates to: QSIPDRLQVSPDRHLLPDGRDSR*APRKPT Trigger: AGTCGGCTTCCGCGGGGCCCAGCGTGAGTCTCTACC...ATCAGGAAGAAGGTGCCTGTCGGGGCTCACTTGAAGCCTGTCAGGGATGCTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000620660.4 ENST00000623711.4 |
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| CDS-3UTR CCA 90 bp | GAGGTCTCCAAGGATCAAGGGTACCTGGAGACAGAGCCTGGCTCTGGATGGCTTAGCGGCACCGCATGGTaGAGCCACATCACTAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: EVSKDQGYLETEPGSGWLSGTAW*SHITSA Trigger: AGCGCTAGTGATGTGGCTCCACCATGCGGTGCCGCT...AAGCCATCCAGAGCCAGGCTCTGTCTCCAGGTACCCTTGATCCTTGGAGACCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| CDS-3UTR CCA 90 bp | CTCCAAGGATCAAGGGTACCTGGAGACAGAGCCTGGCTCTGGATGGCTTGTGGAGAGAGCGGCACCGCATaGTGGAGCCACATCACTAGC | + |
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Preference number: 4 (lower is better) Translates to: LQGSRVPGDRAWLWMACGESGTA*WSHITS Trigger: GCTAGTGATGTGGCTCCACCATGCGGTGCCGCTCTC...TCCACAAGCCATCCAGAGCCAGGCTCTGTCTCCAGGTACCCTTGATCCTTGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| CDS-3UTR TCA 90 bp | CAAAGCATCCCTGACAGGCTTCAAGTGAGCCCCGACAGGCACCTTCTTCCTGATGCCCCCAGGGCTGCATaGAACTCTGTTAGGCACTGT | + |
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Preference number: 4 (lower is better) Translates to: QSIPDRLQVSPDRHLLPDAPRAA*NSVRHC Trigger: ACAGTGCCTAACAGAGTTTCATGCAGCCCTGGGGGC...ATCAGGAAGAAGGTGCCTGTCGGGGCTCACTTGAAGCCTGTCAGGGATGCTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000460933.5 ENST00000620660.4 ENST00000623711.4 |
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| CDS-3UTR TCA 90 bp | GAGGTCTCCAAGGATCAAGGGTACCTGGAGACAGAGCCTGGCTCTGGATGGCTTAGGAGGACGTTCTGTTaGAGAAGGGGCAGCACCCTT | + |
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Preference number: 4 (lower is better) Translates to: EVSKDQGYLETEPGSGWLRRTFC*RRGSTL Trigger: AAGGGTGCTGCCCCTTCTTCAACAGAACGTCCTCCT...AAGCCATCCAGAGCCAGGCTCTGTCTCCAGGTACCCTTGATCCTTGGAGACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| CDS-3UTR GCA 90 bp | AGGATCAAGGGTACCTGGAGACAGAGCCTGGCTCTGGATGGCTTGTGGACCATCAGGCTTGAGGGACTCTaGCTCTCGTTTGAGGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: RIKGTWRQSLALDGLWTIRLEGL*LSFEGL Trigger: GAGACCCTCAAACGAGAGGCAGAGTCCCTCAAGCCT...GATGGTCCACAAGCCATCCAGAGCCAGGCTCTGTCTCCAGGTACCCTTGATCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| 3UTR CAA 72 bp | GAAGGGGCAGCACCCTTGGTGGCATTGTACAAAGGCTaGAGGGACTCTGCCTCTCGTTTGAGGGTCTCCTCA | + |
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Preference number: 4 (lower is better) Translates to: EGAAPLVALYKG*RDSASRLRVSS Trigger: TGAGGAGACCCTCAAACGAGAGGCAGAGTCCCTCAAGCCTTTGTACAATGCCACCAAGGGTGCTGCCCCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| CDS-3UTR TCA 90 bp | ATCTCTGACATCACTGCAGCCTCCCTGCAAGGAGGACGTTCTGTTGAAGAAGGGACTGGGCACTGCCCCTaGACAGGTCTCTTTTCACCC | + |
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Preference number: 4 (lower is better) Translates to: ISDITAASLQGGRSVEEGTGHCP*TGLFSP Trigger: GGGTGAAAAGAGACCTGTTCAGGGGCAGTGCCCAGT...CCCTTCTTCAACAGAACGTCCTCCTTGCAGGGAGGCTGCAGTGATGTCAGAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| CDS-3UTR TCA 90 bp | GTCTCCAAGGATCAAGGGTACCTGGAGACAGAGCCTGGCTCTGGATGGCTTGTGCCTGTGATTCATCTCTaGCATCACTGCAGCCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: VSKDQGYLETEPGSGWLVPVIHL*HHCSLP Trigger: AGGGAGGCTGCAGTGATGTCAGAGATGAATCACAGG...CACAAGCCATCCAGAGCCAGGCTCTGTCTCCAGGTACCCTTGATCCTTGGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| CDS-3UTR CCA 90 bp | GAGGTCTCCAAGGATCAAGGGTACCTGGAGACAGAGCCTGGCTCTGGATGGCTTAAGGGGCAGCACCCTTaGTGGCATTGTACAAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: EVSKDQGYLETEPGSGWLKGQHP*WHCTKA Trigger: AGCCTTTGTACAATGCCACCAAGGGTGCTGCCCCTT...AAGCCATCCAGAGCCAGGCTCTGTCTCCAGGTACCCTTGATCCTTGGAGACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| CDS-3UTR TCA 90 bp | CAAAGCATCCCTGACAGGCTTCAAGTGAGCCCCGACAGGCACCTTCTTCCTGATGATACAAAGCATCCCTaGCAGGCTTCAAGTGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: QSIPDRLQVSPDRHLLPDDTKHP*QASSEP Trigger: GGGCTCACTTGAAGCCTGTCAGGGATGCTTTGTATC...ATCAGGAAGAAGGTGCCTGTCGGGGCTCACTTGAAGCCTGTCAGGGATGCTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000460933.5 ENST00000620660.4 ENST00000623711.4 |
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| CDS-3UTR GCA 90 bp | TGGCTTGTGGACCATCTCTCTAGAAAAATGCACTCTTGTCCACAACTCTGCTCCCTGGTGCCCGCACAGTaGCTGGCCCTGGTAAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: WLVDHLSRKMHSCPQLCSLVPAQ*LALVRA Trigger: AGCTCTTACCAGGGCCAGGCACTGTGCGGGCACCAG...GGAGCAGAGTTGTGGACAAGAGTGCATTTTTCTAGAGAGATGGTCCACAAGCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| CDS-3UTR CCA 90 bp | ATCTCTGACATCACTGCAGCCTCCCTGCAAGGAGGACGTTCTGTTGAAGAAGGGACCACTCCCAGGGACTaGGAGAGTTTCCCTTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: ISDITAASLQGGRSVEEGTTPRD*ESFPFS Trigger: GGAGAAAGGGAAACTCTCCCAGTCCCTGGGAGTGGT...CCCTTCTTCAACAGAACGTCCTCCTTGCAGGGAGGCTGCAGTGATGTCAGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| CDS-3UTR CCA 90 bp | AGACAGAGCCTGGCTCTGGATGGCTTGTGGACCATCTCTCTAGAAAAATGCACTAGAGTCCCTGAGCCCTaGAAAGGAGCCCTTCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: RQSLALDGLWTISLEKCTRVPEP*KGALPG Trigger: CCCTGGAAGGGCTCCTTTCCAGGGCTCAGGGACTCT...AGTGCATTTTTCTAGAGAGATGGTCCACAAGCCATCCAGAGCCAGGCTCTGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| CDS-3UTR CCA 90 bp | GTCCTTTACCATCAGCTGGAGAGCGATTTCCCAGTCTGTAATGACCACTCCCAGCCTGGAGACAGAGCCTaGCTCTGGATGGCTTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: VLYHQLESDFPVCNDHSQPGDRA*LWMACG Trigger: TCCACAAGCCATCCAGAGCCAGGCTCTGTCTCCAGG...CTGGGAGTGGTCATTACAGACTGGGAAATCGCTCTCCAGCTGATGGTAAAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| CDS-3UTR TCA 90 bp | CAAAGCATCCCTGACAGGCTTCAAGTGAGCCCCGACAGGCACCTTCTTCCTGATGAAGTGTGTCATCAATaGCACAGTTCCTGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QSIPDRLQVSPDRHLLPDEVCHQ*HSSWQP Trigger: TGGCTGCCAGGAACTGTGTCATTGATGACACACTTC...ATCAGGAAGAAGGTGCCTGTCGGGGCTCACTTGAAGCCTGTCAGGGATGCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000460933.5 ENST00000620660.4 ENST00000623711.4 |
||
| CDS-3UTR GCA 90 bp | TCATCTCTGACATCACTGCAGCCTCCCTGCAAGGAGGACGTTCTGTTGAAGAAGTCACTGCAGCCTCCCTaGAAGGAGGACGTTCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SSLTSLQPPCKEDVLLKKSLQPP*KEDVLL Trigger: CAACAGAACGTCCTCCTTGCAGGGAGGCTGCAGTGA...CTTCTTCAACAGAACGTCCTCCTTGCAGGGAGGCTGCAGTGATGTCAGAGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR GCA 90 bp | GTCTCCAAGGATCAAGGGTACCTGGAGACAGAGCCTGGCTCTGGATGGCTTGTGTCTTGTCCACAACTCTaGTCCCCAAAAGGAGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: VSKDQGYLETEPGSGWLVSCPQL*SPKGVT Trigger: TGTGACTCCTTTTGGGGAGCAGAGTTGTGGACAAGA...CACAAGCCATCCAGAGCCAGGCTCTGTCTCCAGGTACCCTTGATCCTTGGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR CCA 90 bp | TCATCTCTGACATCACTGCAGCCTCCCTGCAAGGAGGACGTTCTGTTGAAGAAGGACAGAGCCTGGCTCTaGATGGCTTGTGGACCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLTSLQPPCKEDVLLKKDRAWL*MACGPS Trigger: AGATGGTCCACAAGCCATCCAGAGCCAGGCTCTGTC...CTTCTTCAACAGAACGTCCTCCTTGCAGGGAGGCTGCAGTGATGTCAGAGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR CCA 90 bp | CAAAGCATCCCTGACAGGCTTCAAGTGAGCCCCGACAGGCACCTTCTTCCTGATGACAGTGATAGTCCATaGGGAACAAGTCTCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSIPDRLQVSPDRHLLPDDSDSP*GTSLWR Trigger: TCTCCAGAGACTTGTTCCCCATGGACTATCACTGTC...ATCAGGAAGAAGGTGCCTGTCGGGGCTCACTTGAAGCCTGTCAGGGATGCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000460933.5 ENST00000620660.4 ENST00000623711.4 |
||
| CDS-3UTR CCA 90 bp | CAAAGCATCCCTGACAGGCTTCAAGTGAGCCCCGACAGGCACCTTCTTCCTGATTTCTTCCTGATGGTGTaGGATTGGAGAGGAGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QSIPDRLQVSPDRHLLPDFFLMV*DWRGVR Trigger: TCTGACTCCTCTCCAATCCCACACCATCAGGAAGAA...ATCAGGAAGAAGGTGCCTGTCGGGGCTCACTTGAAGCCTGTCAGGGATGCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000460933.5 ENST00000620660.4 ENST00000623711.4 |
||
| CDS-3UTR CCA 90 bp | ATCTCTGACATCACTGCAGCCTCCCTGCAAGGAGGACGTTCTGTTGAAGAAGGGGCTTCATCCAGCTGTTaGAGTCAGAAGAGCAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ISDITAASLQGGRSVEEGASSSC*SQKSSQ Trigger: TTGGCTGCTCTTCTGACTCCAACAGCTGGATGAAGC...CCCTTCTTCAACAGAACGTCCTCCTTGCAGGGAGGCTGCAGTGATGTCAGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR TCA 90 bp | TCATCTCTGACATCACTGCAGCCTCCCTGCAAGGAGGACGTTCTGTTGAAGAAGCATTGTACAAAGGCTTaGGGGACTCTGCCTCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSLTSLQPPCKEDVLLKKHCTKA*GTLPLV Trigger: AACGAGAGGCAGAGTCCCTCAAGCCTTTGTACAATG...CTTCTTCAACAGAACGTCCTCCTTGCAGGGAGGCTGCAGTGATGTCAGAGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR TCA 90 bp | GGTGCCCGCACAGTGCCTGGCCCTGGTAAGAGCTTGTACATGCTTATTGAACCACTTGTACATGCTTATTaGACCACGTGGCTGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GARTVPGPGKSLYMLIEPLVHAY*TTWLEE Trigger: TTCTTCCAGCCACGTGGTTCAATAAGCATGTACAAG...TGGTTCAATAAGCATGTACAAGCTCTTACCAGGGCCAGGCACTGTGCGGGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR GCA 90 bp | CAAAGCATCCCTGACAGGCTTCAAGTGAGCCCCGACAGGCACCTTCTTCCTGATGTCTTGCTGAGAAATTaGCTGTGGATTATTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QSIPDRLQVSPDRHLLPDVLLRN*LWIIGL Trigger: GAGGCCAATAATCCACAGGCAATTTCTCAGCAAGAC...ATCAGGAAGAAGGTGCCTGTCGGGGCTCACTTGAAGCCTGTCAGGGATGCTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000460933.5 ENST00000620660.4 ENST00000623711.4 |
||
| CDS-3UTR CCA 90 bp | TACAAAGGCTTGAGGGACTCTGCCTCTCGTTTGAGGGTCTCCTCACTGGGCACTGCTCTGGATGGCTTGTaGACCATCTCTCTAGAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: YKGLRDSASRLRVSSLGTALDGL*TISLEK Trigger: TTTTTCTAGAGAGATGGTCCACAAGCCATCCAGAGC...AGTGCCCAGTGAGGAGACCCTCAAACGAGAGGCAGAGTCCCTCAAGCCTTTGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR TCA 90 bp | AGACAGAGCCTGGCTCTGGATGGCTTGTGGACCATCTCTCTAGAAAAATGCACTGAAGTGTGTCATCAATaGCACAGTTCCTGGCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RQSLALDGLWTISLEKCTEVCHQ*HSSWQP Trigger: TGGCTGCCAGGAACTGTGTCATTGATGACACACTTC...AGTGCATTTTTCTAGAGAGATGGTCCACAAGCCATCCAGAGCCAGGCTCTGTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR CCA 90 bp | GGCTCCTGTAGGACAAGAATAGGCTTCATCCAGCTGTTGGAGTCAGAAGAGCAGGACAGTGATAGTCCATaGGGAACAAGTCTCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSCRTRIGFIQLLESEEQDSDSP*GTSLWR Trigger: TCTCCAGAGACTTGTTCCCCATGGACTATCACTGTC...CTGCTCTTCTGACTCCAACAGCTGGATGAAGCCTATTCTTGTCCTACAGGAGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR CCA 90 bp | TCATCTCTGACATCACTGCAGCCTCCCTGCAAGGAGGACGTTCTGTTGAAGAAGCTTATTCACTTCCAGTaGGGCTCCTGTAGGACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSLTSLQPPCKEDVLLKKLIHFQ*GSCRTR Trigger: TCTTGTCCTACAGGAGCCCCACTGGAAGTGAATAAG...CTTCTTCAACAGAACGTCCTCCTTGCAGGGAGGCTGCAGTGATGTCAGAGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR CCA 90 bp | CTCCAAGGATCAAGGGTACCTGGAGACAGAGCCTGGCTCTGGATGGCTTGTGGAATTGAACCACGTGGCTaGAAGAATAAAGGGAAACTT | + |
|
Preference number: 4 (lower is better) Translates to: LQGSRVPGDRAWLWMACGIEPRG*KNKGKL Trigger: AAGTTTCCCTTTATTCTTCCAGCCACGTGGTTCAAT...TCCACAAGCCATCCAGAGCCAGGCTCTGTCTCCAGGTACCCTTGATCCTTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR TCA 90 bp | TACCATCAGCTGGAGAGCGATTTCCCAGTCTGTAATGACCACTCCCAGGGACTGTCCAAATATGGCAACTaGGCTTATTCACTTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: YHQLESDFPVCNDHSQGLSKYGN*AYSLPV Trigger: CACTGGAAGTGAATAAGCTCAGTTGCCATATTTGGA...CAGTCCCTGGGAGTGGTCATTACAGACTGGGAAATCGCTCTCCAGCTGATGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR GCA 90 bp | CAAAGCATCCCTGACAGGCTTCAAGTGAGCCCCGACAGGCACCTTCTTCCTGATAGAAGTGGTTGGAGCTaGATGTACAGGATCATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QSIPDRLQVSPDRHLLPDRSGWS*MYRIIN Trigger: ATTTATGATCCTGTACATGCAGCTCCAACCACTTCT...ATCAGGAAGAAGGTGCCTGTCGGGGCTCACTTGAAGCCTGTCAGGGATGCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000460933.5 ENST00000620660.4 ENST00000623711.4 |
||
| CDS-3UTR GCA 90 bp | ACAGAGCCTGGCTCTGGATGGCTTGTGGACCATCTCTCTAGAAAAATGCACTCTTTAGGAACCCTCTTCTaGTTTCTTCCCAGAAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TEPGSGWLVDHLSRKMHSLGTLF*FLPRRH Trigger: GTGCCTTCTGGGAAGAAAGCAGAAGAGGGTTCCTAA...AGAGTGCATTTTTCTAGAGAGATGGTCCACAAGCCATCCAGAGCCAGGCTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR CCA 90 bp | CAAAGCATCCCTGACAGGCTTCAAGTGAGCCCCGACAGGCACCTTCTTCCTGATAAGGCAATATCACCATaGGCTTTTCTCCTTCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QSIPDRLQVSPDRHLLPDKAISP*AFLLLL Trigger: TAGAAGAAGGAGAAAAGCCCATGGTGATATTGCCTT...ATCAGGAAGAAGGTGCCTGTCGGGGCTCACTTGAAGCCTGTCAGGGATGCTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000460933.5 ENST00000620660.4 ENST00000623711.4 |
||
| CDS-3UTR CCA 90 bp | CAGACAGTGATAGTCCATGGGGAACAAGTCTCTGGAGAGGGCATTGTCTGTGATGACAGTGATAGTCCATaGGGAACAAGTCTCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QTVIVHGEQVSGEGIVCDDSDSP*GTSLWR Trigger: TCTCCAGAGACTTGTTCCCCATGGACTATCACTGTC...ATCACAGACAATGCCCTCTCCAGAGACTTGTTCCCCATGGACTATCACTGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486725.1 |
||
| CDS-3UTR TCA 90 bp | CAAAGCATCCCTGACAGGCTTCAAGTGAGCCCCGACAGGCACCTTCTTCCTGATGTTTTTGTCCAAGGCTaGAGTTTTTACTTCTTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QSIPDRLQVSPDRHLLPDVFVQG*SFYFFK Trigger: CTTGAAGAAGTAAAAACTTCAGCCTTGGACAAAAAC...ATCAGGAAGAAGGTGCCTGTCGGGGCTCACTTGAAGCCTGTCAGGGATGCTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENST00000460933.5 ENST00000620660.4 ENST00000623711.4 |
||
| CDS-3UTR GCA 90 bp | AGACAGAGCCTGGCTCTGGATGGCTTGTGGACCATCTCTCTAGAAAAATGCACTGTCTTGCTGAGAAATTaGCTGTGGATTATTGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RQSLALDGLWTISLEKCTVLLRN*LWIIGL Trigger: GAGGCCAATAATCCACAGGCAATTTCTCAGCAAGAC...AGTGCATTTTTCTAGAGAGATGGTCCACAAGCCATCCAGAGCCAGGCTCTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR CCA 90 bp | TACCATCAGCTGGAGAGCGATTTCCCAGTCTGTAATGACCACTCCCAGGGACTGAAGGCAATATCACCATaGGCTTTTCTCCTTCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: YHQLESDFPVCNDHSQGLKAISP*AFLLLL Trigger: TAGAAGAAGGAGAAAAGCCCATGGTGATATTGCCTT...CAGTCCCTGGGAGTGGTCATTACAGACTGGGAAATCGCTCTCCAGCTGATGGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR GCA 90 bp | TCATCTCTGACATCACTGCAGCCTCCCTGCAAGGAGGACGTTCTGTTGAAGAAGCACATGAATAGGATTTaGAGTCCTTTACCATCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLTSLQPPCKEDVLLKKHMNRI*SPLPSA Trigger: AGCTGATGGTAAAGGACTGCAAATCCTATTCATGTG...CTTCTTCAACAGAACGTCCTCCTTGCAGGGAGGCTGCAGTGATGTCAGAGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR GCA 90 bp | AGACAGAGCCTGGCTCTGGATGGCTTGTGGACCATCTCTCTAGAAAAATGCACTGTAAGAGCTTGTACATaGTTATTGAACCACGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RQSLALDGLWTISLEKCTVRACT*LLNHVA Trigger: AGCCACGTGGTTCAATAAGCATGTACAAGCTCTTAC...AGTGCATTTTTCTAGAGAGATGGTCCACAAGCCATCCAGAGCCAGGCTCTGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| 3UTR CAA 72 bp | CAGTGCCTGGCCCTGGTAAGAGCTTGTACATGCTTATaGAACCACGTGGCTGGAAGAATAAAGGGAAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: QCLALVRACTCL*NHVAGRIKGNF Trigger: AAAGTTTCCCTTTATTCTTCCAGCCACGTGGTTCAATAAGCATGTACAAGCTCTTACCAGGGCCAGGCACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR CAA 90 bp | AGGCTTGAGGGACTCTGCCTCTCGTTTGAGGGTCTCCTCACTGGGCACTGCCCCGACTCTGCCTCTCGTTaGAGGGTCTCCTCACTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RLEGLCLSFEGLLTGHCPDSASR*RVSSLG Trigger: GCCCAGTGAGGAGACCCTCAAACGAGAGGCAGAGTC...GGGGCAGTGCCCAGTGAGGAGACCCTCAAACGAGAGGCAGAGTCCCTCAAGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR CAA 90 bp | GTCTCCAAGGATCAAGGGTACCTGGAGACAGAGCCTGGCTCTGGATGGCTTGTGGCACCCTTGGTGGCATaGTACAAAGGCTTGAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VSKDQGYLETEPGSGWLVAPLVA*YKGLRD Trigger: GTCCCTCAAGCCTTTGTACAATGCCACCAAGGGTGC...CACAAGCCATCCAGAGCCAGGCTCTGTCTCCAGGTACCCTTGATCCTTGGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR CAA 90 bp | CTCCAAGGATCAAGGGTACCTGGAGACAGAGCCTGGCTCTGGATGGCTTGTGGAGCATTGTACAAAGGCTaGAGGGACTCTGCCTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: LQGSRVPGDRAWLWMACGALYKG*RDSASR Trigger: ACGAGAGGCAGAGTCCCTCAAGCCTTTGTACAATGC...TCCACAAGCCATCCAGAGCCAGGCTCTGTCTCCAGGTACCCTTGATCCTTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR CAA 90 bp | GGTGCCCGCACAGTGCCTGGCCCTGGTAAGAGCTTGTACATGCTTATTGAACCAAAGGAGGACGTTCTGTaGAAGAAGGGGCAGCACCCT | + |
|
Preference number: 5 (lower is better) Translates to: GARTVPGPGKSLYMLIEPKEDVL*KKGQHP Trigger: AGGGTGCTGCCCCTTCTTCAACAGAACGTCCTCCTT...TGGTTCAATAAGCATGTACAAGCTCTTACCAGGGCCAGGCACTGTGCGGGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR CAA 90 bp | AGGCTTCATCCAGCTGTTGGAGTCAGAAGAGCAGCCAAGAGGGCCCTCCTCCCCGCTTGTACATGCTTATaGAACCACGTGGCTGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RLHPAVGVRRAAKRALLPACTCL*NHVAGR Trigger: TCTTCCAGCCACGTGGTTCAATAAGCATGTACAAGC...GGGGAGGAGGGCCCTCTTGGCTGCTCTTCTGACTCCAACAGCTGGATGAAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR CAA 90 bp | CAAAGCATCCCTGACAGGCTTCAAGTGAGCCCCGACAGGCACCTTCTTCCTGATATAGGAGTTGCATTGTaGGGCGTGTCTGCTCTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: QSIPDRLQVSPDRHLLPDIGVAL*GVSALR Trigger: TCTGAGAGCAGACACGCCCAACAATGCAACTCCTAT...ATCAGGAAGAAGGTGCCTGTCGGGGCTCACTTGAAGCCTGTCAGGGATGCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000460933.5 ENST00000620660.4 ENST00000623711.4 |
||
| CDS-3UTR CAA 90 bp | AGGATCAAGGGTACCTGGAGACAGAGCCTGGCTCTGGATGGCTTGTGGACCATCGGTCTTGCTGAGAAATaGCCTGTGGATTATTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RIKGTWRQSLALDGLWTIGLAEK*PVDYWP Trigger: AGGCCAATAATCCACAGGCAATTTCTCAGCAAGACC...GATGGTCCACAAGCCATCCAGAGCCAGGCTCTGTCTCCAGGTACCCTTGATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR CAA 90 bp | CTGGAGAGCGATTTCCCAGTCTGTAATGACCACTCCCAGGGACTGGGAGAGTTTCTGGCTCTGGATGGCTaGTGGACCATCTCTCTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LESDFPVCNDHSQGLGEFLALDG*WTISLE Trigger: TTCTAGAGAGATGGTCCACAAGCCATCCAGAGCCAG...AAACTCTCCCAGTCCCTGGGAGTGGTCATTACAGACTGGGAAATCGCTCTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR CAA 90 bp | CAAAGCATCCCTGACAGGCTTCAAGTGAGCCCCGACAGGCACCTTCTTCCTGATAGCTTATATTCAACCTaGGACTTCGCATGCCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: QSIPDRLQVSPDRHLLPDSLYST*DFACQV Trigger: CACCTGGCATGCGAAGTCCAAGGTTGAATATAAGCT...ATCAGGAAGAAGGTGCCTGTCGGGGCTCACTTGAAGCCTGTCAGGGATGCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000460933.5 ENST00000620660.4 ENST00000623711.4 |
||
| CDS-3UTR CAA 90 bp | CAAAGCATCCCTGACAGGCTTCAAGTGAGCCCCGACAGGCACCTTCTTCCTGATGGTCTTGCTGAGAAATaGCCTGTGGATTATTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QSIPDRLQVSPDRHLLPDGLAEK*PVDYWP Trigger: AGGCCAATAATCCACAGGCAATTTCTCAGCAAGACC...ATCAGGAAGAAGGTGCCTGTCGGGGCTCACTTGAAGCCTGTCAGGGATGCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000460933.5 ENST00000620660.4 ENST00000623711.4 |
||
| CDS TCA 90 bp | TCTGTGGGGCTTGGCACAAGAACTGCCTCTAATTCTCAGTCTTGTTaGGGGCGTTTGCAGAGGGAGAGCTGTGAGCCATTTGGCATAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SVGLGTRTASNSQSC*GRLQRESCEPFGIR Trigger: TCTTATGCCAAATGGCTCACAGCTCTCCCTCTGCAAACGCCCTCAACAAGACTGAGAATTAGAGGCAGTTCTTGTGCCAAGCCCCACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473208.5 |
||
| CDS-3UTR CAA 90 bp | CTGGATGGCTTGTGGACCATCTCTCTAGAAAAATGCACTCTTGTCCACAACTCTGAAGGGGCAGCACCCTaGGTGGCATTGTACAAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LDGLWTISLEKCTLVHNSEGAAP*VALYKG Trigger: GCCTTTGTACAATGCCACCAAGGGTGCTGCCCCTTC...AGAGTTGTGGACAAGAGTGCATTTTTCTAGAGAGATGGTCCACAAGCCATCCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR CAA 90 bp | CAGACAGTGATAGTCCATGGGGAACAAGTCTCTGGAGAGGGCATTGTCTGTGATGGTCTTGCTGAGAAATaGCCTGTGATGAAGACCTCG | + |
|
Preference number: 5 (lower is better) Translates to: QTVIVHGEQVSGEGIVCDGLAEK*PVMKTS Trigger: CGAGGTCTTCATCACAGGCAATTTCTCAGCAAGACC...ATCACAGACAATGCCCTCTCCAGAGACTTGTTCCCCATGGACTATCACTGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486725.1 |
||
| CDS-3UTR CAA 90 bp | CAAAGCATCCCTGACAGGCTTCAAGTGAGCCCCGACAGGCACCTTCTTCCTGATGTTCTGCTAGTGTTTTaGTCCAAGGCTGAAGTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: QSIPDRLQVSPDRHLLPDVLLVF*SKAEVF Trigger: AAAAACTTCAGCCTTGGACAAAAACACTAGCAGAAC...ATCAGGAAGAAGGTGCCTGTCGGGGCTCACTTGAAGCCTGTCAGGGATGCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000460933.5 ENST00000620660.4 ENST00000623711.4 |
||
| CDS-3UTR CAA 90 bp | CTCCAAGGATCAAGGGTACCTGGAGACAGAGCCTGGCTCTGGATGGCTTGTGGATCAAATGTGAGAATTTaGGTCCAAATATGGCAACTG | + |
|
Preference number: 5 (lower is better) Translates to: LQGSRVPGDRAWLWMACGSNVRI*VQIWQL Trigger: CAGTTGCCATATTTGGACCAAAATTCTCACATTTGA...TCCACAAGCCATCCAGAGCCAGGCTCTGTCTCCAGGTACCCTTGATCCTTGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS-3UTR CAA 90 bp | ACAGAGCCTGGCTCTGGATGGCTTGTGGACCATCTCTCTAGAAAAATGCACTCTGGCCCTGGTAAGAGCTaGTACATGCTTATTGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: TEPGSGWLVDHLSRKMHSGPGKS*YMLIEP Trigger: TGGTTCAATAAGCATGTACAAGCTCTTACCAGGGCC...AGAGTGCATTTTTCTAGAGAGATGGTCCACAAGCCATCCAGAGCCAGGCTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484106.3 |
||
| CDS CCA 90 bp | GAGAAACCAGAGACAGTGATTAGGTCATCTTATTTTTCCTTTGGCTaGGGCTTAATCATCCTCCCTCCTTTCCCTGCACCACTGTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: EKPETVIRSSYFSFG*GLIILPPFPAPLCI Trigger: GATGCACAGTGGTGCAGGGAAAGGAGGGAGGATGATTAAGCCCCAGCCAAAGGAAAAATAAGATGACCTAATCACTGTCTCTGGTTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000464879.1 |
||
| CDS GCA 90 bp | TTATTTTTCCTTTGGCTGGGGCTTAATCATCCTCCCTCCTTTCCCTaGACCACTGTGCATCGATGTGTATGGGCTCCCACATATATACAA | + |
|
Preference number: 5 (lower is better) Translates to: LFFLWLGLNHPPSFP*TTVHRCVWAPTYIQ Trigger: TTGTATATATGTGGGAGCCCATACACATCGATGCACAGTGGTGCAGGGAAAGGAGGGAGGATGATTAAGCCCCAGCCAAAGGAAAAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000464879.1 |
||
| CDS CCA 90 bp | AAAAATATCAGATCTTCATCTGATTCAATACCCTTTGCATTCCCCTaGACCACTAGACTTTCTCTCCAGAGGAGCAAGGGAGATCACATG | + |
|
Preference number: 5 (lower is better) Translates to: KNIRSSSDSIPFAFP*TTRLSLQRSKGDHM Trigger: CATGTGATCTCCCTTGCTCCTCTGGAGAGAAAGTCTAGTGGTCCAGGGGAATGCAAAGGGTATTGAATCAGATGAAGATCTGATATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000473208.5 |
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| CDS CCA 90 bp | TATTTGCAGGAGTTACTAACATGGAAAGCACTGACCCTGAGGAGGTaGGAAAATGAGGACTTAAAGATCAGTAAACCTCTAAGAGGCAAC | + |
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Preference number: 5 (lower is better) Translates to: YLQELLTWKALTLRR*ENEDLKISKPLRGN Trigger: GTTGCCTCTTAGAGGTTTACTGATCTTTAAGTCCTCATTTTCCCACCTCCTCAGGGTCAGTGCTTTCCATGTTAGTAACTCCTGCAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473208.5 |
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| CDS TCA 90 bp | GGAAAAATCATAAACTCAAAGTTGCTTCCTGTGGGCTGGATTCTCTaGAGGCACACTCTAACCACACTATATCTTTACTCCAAAGGGCAA | + |
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Preference number: 5 (lower is better) Translates to: GKIINSKLLPVGWIL*RHTLTTLYLYSKGQ Trigger: TTGCCCTTTGGAGTAAAGATATAGTGTGGTTAGAGTGTGCCTTCAGAGAATCCAGCCCACAGGAAGCAACTTTGAGTTTATGATTTTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000473208.5 |
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| CDS CAA 90 bp | TTCCAGTGGGGCTCCTGTAGGACAAGAATAGGCTTCATCCAGCTGTaGGAGTCAGAAGAGCAGCCAAGAGGGCCCTCCTCCCCTTCAGGA | + |
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Preference number: 6 (lower is better) Translates to: FQWGSCRTRIGFIQL*ESEEQPRGPSSPSG Trigger: TCCTGAAGGGGAGGAGGGCCCTCTTGGCTGCTCTTCTGACTCCAACAGCTGGATGAAGCCTATTCTTGTCCTACAGGAGCCCCACTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484106.3 |
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| CDS GCA 72 bp | CTTTGGCTGGGGCTTAATCATCCTCCCTCCTTTCCCTaGACCACTGTGCATCGATGTGTATGGGCTCCCACA | + |
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Preference number: 6 (lower is better) Translates to: LWLGLNHPPSFP*TTVHRCVWAPT Trigger: TGTGGGAGCCCATACACATCGATGCACAGTGGTGCAGGGAAAGGAGGGAGGATGATTAAGCCCCAGCCAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000464879.1 |
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| CDS CAA 90 bp | CAATCACCAATGCACAAGTGGCAAAGCTGTGCGCTCCCCTCATATTaGCAGGAGTTACTAACATGGAAAGCACTGACCCTGAGGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: QSPMHKWQSCALPSY*QELLTWKALTLRRW Trigger: CCACCTCCTCAGGGTCAGTGCTTTCCATGTTAGTAACTCCTGCAAATATGAGGGGAGCGCACAGCTTTGCCACTTGTGCATTGGTGATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473208.5 |
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| CDS TCA 72 bp | CTTGGCACAAGAACTGCCTCTAATTCTCAGTCTTGTTaGGGGCGTTTGCAGAGGGAGAGCTGTGAGCCATTT | + |
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Preference number: 6 (lower is better) Translates to: LGTRTASNSQSC*GRLQRESCEPF Trigger: AAATGGCTCACAGCTCTCCCTCTGCAAACGCCCTCAACAAGACTGAGAATTAGAGGCAGTTCTTGTGCCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473208.5 |
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| CDS GCA 72 bp | CGTGGCACAATCACCAATGCACAAGTGGCAAAGCTGTaGGCTCCCCTCATATTTGCAGGAGTTACTAACATG | + |
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Preference number: 6 (lower is better) Translates to: RGTITNAQVAKL*APLIFAGVTNM Trigger: CATGTTAGTAACTCCTGCAAATATGAGGGGAGCGCACAGCTTTGCCACTTGTGCATTGGTGATTGTGCCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473208.5 |
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| CDS CAA 72 bp | ATGCACAAGTGGCAAAGCTGTGCGCTCCCCTCATATTaGCAGGAGTTACTAACATGGAAAGCACTGACCCTG | + |
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Preference number: 6 (lower is better) Translates to: MHKWQSCALPSY*QELLTWKALTL Trigger: CAGGGTCAGTGCTTTCCATGTTAGTAACTCCTGCAAATATGAGGGGAGCGCACAGCTTTGCCACTTGTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473208.5 |
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| CDS GCA 72 bp | GGCTTAATCATCCTCCCTCCTTTCCCTGCACCACTGTaGATCGATGTGTATGGGCTCCCACATATATACAAA | + |
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Preference number: 6 (lower is better) Translates to: GLIILPPFPAPL*IDVYGLPHIYK Trigger: TTTGTATATATGTGGGAGCCCATACACATCGATGCACAGTGGTGCAGGGAAAGGAGGGAGGATGATTAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464879.1 |
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| CDS CCA 72 bp | AGTTATAAAACCGTGGCACAATCACCAATGCACAAGTaGCAAAGCTGTGCGCTCCCCTCATATTTGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: SYKTVAQSPMHK*QSCALPSYLQE Trigger: CTCCTGCAAATATGAGGGGAGCGCACAGCTTTGCCACTTGTGCATTGGTGATTGTGCCACGGTTTTATAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473208.5 |
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| CDS CCA 72 bp | GAGACAGTGATTAGGTCATCTTATTTTTCCTTTGGCTaGGGCTTAATCATCCTCCCTCCTTTCCCTGCACCA | + |
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Preference number: 6 (lower is better) Translates to: ETVIRSSYFSFG*GLIILPPFPAP Trigger: TGGTGCAGGGAAAGGAGGGAGGATGATTAAGCCCCAGCCAAAGGAAAAATAAGATGACCTAATCACTGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000464879.1 |
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| CDS TCA 72 bp | ATAAGAAGTGTTCACCATCAGGCATCTTTGGGCCAATaGAGGGGCCAAACTACAAGCAGAAATAGCGCAAGA | + |
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Preference number: 6 (lower is better) Translates to: IRSVHHQASLGQ*RGQTTSRNSAR Trigger: TCTTGCGCTATTTCTGCTTGTAGTTTGGCCCCTTCATTGGCCCAAAGATGCCTGATGGTGAACACTTCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473208.5 |
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| CDS CCA 72 bp | CCCTCCTTTCCCTGCACCACTGTGCATCGATGTGTATaGGCTCCCACATATATACAAATAACTGCTTTCATT | + |
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Preference number: 6 (lower is better) Translates to: PSFPCTTVHRCV*APTYIQITAFI Trigger: AATGAAAGCAGTTATTTGTATATATGTGGGAGCCCATACACATCGATGCACAGTGGTGCAGGGAAAGGAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464879.1 |
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| CDS TCA 72 bp | ATAAACTCAAAGTTGCTTCCTGTGGGCTGGATTCTCTaGAGGCACACTCTAACCACACTATATCTTTACTCC | + |
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Preference number: 6 (lower is better) Translates to: INSKLLPVGWIL*RHTLTTLYLYS Trigger: GGAGTAAAGATATAGTGTGGTTAGAGTGTGCCTTCAGAGAATCCAGCCCACAGGAAGCAACTTTGAGTTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000473208.5 |
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| CDS TCA 72 bp | ATGGGATGCTGCAAAACCTTACAATCTAAAACTGCATaGGACACAACACTGCAAATGCTTGCTCTGAGCATT | + |
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Preference number: 6 (lower is better) Translates to: MGCCKTLQSKTA*DTTLQMLALSI Trigger: AATGCTCAGAGCAAGCATTTGCAGTGTTGTGTCTCATGCAGTTTTAGATTGTAAGGTTTTGCAGCATCCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473208.5 |
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| CDS CAA 90 bp | AAGGCTACAGTGAATATAAAACCGTTTCTTGGGAAAATCCTGGCTTaGTCTACATTTATCCCTGCTACTCACTTCTGTGCTGAAGTGATG | + |
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Preference number: 6 (lower is better) Translates to: KATVNIKPFLGKILA*STFIPATHFCAEVM Trigger: CATCACTTCAGCACAGAAGTGAGTAGCAGGGATAAATGTAGACAAAGCCAGGATTTTCCCAAGAAACGGTTTTATATTCACTGTAGCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000473208.5 |
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| CDS CAA 90 bp | GCCAAAAAGTTCTTAGCTGGTCACACTGGATTTAGAATCAGATTTTaGAATCCTAGATTTACCAATTACTATCAGAGTGACCATCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: AKKFLAGHTGFRIRF*NPRFTNYYQSDHLL Trigger: GAGAAGATGGTCACTCTGATAGTAATTGGTAAATCTAGGATTCAAAAATCTGATTCTAAATCCAGTGTGACCAGCTAAGAACTTTTTGGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000473208.5 |
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