Pregenerated sensors for RTP1 (Homo sapiens)
Ensembl gene IDs: ENSG00000175077Ensembl transcript IDs: ENST00000312295.5
Found 77 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGGAGGCCAGGCCCCTGCTCCTGAATTCTGGCCATCAGCACTGCTaGGAATCTGCTAGACTTGGTCCCCGAACTCTGAAGACCCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: QEARPLLLNSGHQHC*ESARLGPRTLKTLH Trigger: ATGGAGGGTCTTCAGAGTTCGGGGACCAAGTCTAGCAGATTCTCAGCAGTGCTGATGGCCAGAATTCAGGAGCAGGGGCCTGGCCTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR GCA 90 bp | AACAGCCTGATCTCCCACCTCTTGCACTTCAAGGGAAACCTCTGCTaGGTGTGTGAAGGCAGAATCACGGATGAGGCTCACAGGGTGGGC | + |
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Preference number: 1 (lower is better) Translates to: NSLISHLLHFKGNLC*VCEGRITDEAHRVG Trigger: GCCCACCCTGTGAGCCTCATCCGTGATTCTGCCTTCACACACGCAGCAGAGGTTTCCCTTGAAGTGCAAGAGGTGGGAGATCAGGCTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR CCA 90 bp | CTGAAGATACCCCATCCCTGTGGCTTTAGGGGGACAGCTGATCTTTaGCAAGAGGCCTCATGCTTGGCCAATGTGAGAAAGCCATTCAAC | + |
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Preference number: 1 (lower is better) Translates to: LKIPHPCGFRGTADL*QEASCLANVRKPFN Trigger: GTTGAATGGCTTTCTCACATTGGCCAAGCATGAGGCCTCTTGCCAAAGATCAGCTGTCCCCCTAAAGCCACAGGGATGGGGTATCTTCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR TCA 90 bp | AACTATAATTTCAGCAAAGAACCCAGGAGGCCAGGCCCCTGCTCCTaGATTCTGGCCATCAGCACTGCTGAGAATCTGCTAGACTTGGTC | + |
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Preference number: 1 (lower is better) Translates to: NYNFSKEPRRPGPCS*ILAISTAENLLDLV Trigger: GACCAAGTCTAGCAGATTCTCAGCAGTGCTGATGGCCAGAATTCAGGAGCAGGGGCCTGGCCTCCTGGGTTCTTTGCTGAAATTATAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR TCA 90 bp | GCCATCAGCACTGCTGAGAATCTGCTAGACTTGGTCCCCGAACTCTaGAGACCCTCCATTATAATGCCTCCCAGAGATTTTGTGCTTTGC | + |
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Preference number: 1 (lower is better) Translates to: AISTAENLLDLVPEL*RPSIIMPPRDFVLC Trigger: GCAAAGCACAAAATCTCTGGGAGGCATTATAATGGAGGGTCTTCAGAGTTCGGGGACCAAGTCTAGCAGATTCTCAGCAGTGCTGATGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR TCA 90 bp | GGGGGACAGCTGATCTTTGGCAAGAGGCCTCATGCTTGGCCAATGTaGGAAAGCCATTCAACTATAATTTCAGCAAAGAACCCAGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: GGQLIFGKRPHAWPM*ESHSTIISAKNPGG Trigger: GCCTCCTGGGTTCTTTGCTGAAATTATAGTTGAATGGCTTTCTCACATTGGCCAAGCATGAGGCCTCTTGCCAAAGATCAGCTGTCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR GCA 90 bp | CCCTGTGGCTTTAGGGGGACAGCTGATCTTTGGCAAGAGGCCTCATaGTTGGCCAATGTGAGAAAGCCATTCAACTATAATTTCAGCAAA | + |
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Preference number: 1 (lower is better) Translates to: PCGFRGTADLWQEAS*LANVRKPFNYNFSK Trigger: TTTGCTGAAATTATAGTTGAATGGCTTTCTCACATTGGCCAAGCATGAGGCCTCTTGCCAAAGATCAGCTGTCCCCCTAAAGCCACAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR-3UTR TCA 90 bp | CACCCCAACCACCATCTTTCAGGCAGGCAGACCCCAGAATCTGCCCTGAGTGGAAGGCAGAATCACGGATaGGGCTCACAGGGTGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: HPNHHLSGRQTPESALSGRQNHG*GSQGGQ Trigger: TTGCCCACCCTGTGAGCCTCATCCGTGATTCTGCCT...TCCACTCAGGGCAGATTCTGGGGTCTGCCTGCCTGAAAGATGGTGGTTGGGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR-3UTR CCA 90 bp | CACCCCAACCACCATCTTTCAGGCAGGCAGACCCCAGAATCTGCCCTGAGTGGAGAGACCCTGTGTACCTaGCAGCAAAGGAACAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: HPNHHLSGRQTPESALSGETLCT*QQRNSL Trigger: CAGGCTGTTCCTTTGCTGCCAGGTACACAGGGTCTC...TCCACTCAGGGCAGATTCTGGGGTCTGCCTGCCTGAAAGATGGTGGTTGGGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR CAA 90 bp | ACCCTGTGTACCTGGCAGCAAAGGAACAGCCTGATCTCCCACCTCTaGCACTTCAAGGGAAACCTCTGCTGCGTGTGTGAAGGCAGAATC | + |
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Preference number: 2 (lower is better) Translates to: TLCTWQQRNSLISHL*HFKGNLCCVCEGRI Trigger: GATTCTGCCTTCACACACGCAGCAGAGGTTTCCCTTGAAGTGCAAGAGGTGGGAGATCAGGCTGTTCCTTTGCTGCCAGGTACACAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR-3UTR TCA 90 bp | AGGGGCAGGGGTGAGGGACTAATAAGAGCAAGGTCGAGCTCATTACTGTGGAAAAAATCCAAAAGTCCCTaGGGCACCTACGCAGAACTT | + |
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Preference number: 2 (lower is better) Translates to: RGRGEGLIRARSSSLLWKKSKSP*GTYAEL Trigger: AAGTTCTGCGTAGGTGCCTCAGGGACTTTTGGATTT...TTTCCACAGTAATGAGCTCGACCTTGCTCTTATTAGTCCCTCACCCCTGCCCCT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR-3UTR CCA 90 bp | CCCCACTGTCAGAAAGTGTCTCCTCCCATTTCAAGCCATATCACATCTCATTTTCTCGCATCAGCTAACTaGCACCCTCGACAGGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: PHCQKVSPPISSHITSHFLASAN*HPRQAL Trigger: CAGAGCCTGTCGAGGGTGCCAGTTAGCTGATGCGAG...AAAATGAGATGTGATATGGCTTGAAATGGGAGGAGACACTTTCTGACAGTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR-3UTR TCA 90 bp | CCCCACTGTCAGAAAGTGTCTCCTCCCATTTCAAGCCATATCACATCTCATTTTGTCCAAGATCCCCACTaGGTCAGTGACATCACCAGC | + |
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Preference number: 2 (lower is better) Translates to: PHCQKVSPPISSHITSHFVQDPH*VSDITS Trigger: GCTGGTGATGTCACTGACTCAGTGGGGATCTTGGAC...AAAATGAGATGTGATATGGCTTGAAATGGGAGGAGACACTTTCTGACAGTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR-3UTR CCA 90 bp | AGGGGCAGGGGTGAGGGACTAATAAGAGCAAGGTCGAGCTCATTACTGTGGAAAGTAGGAGTTGGAGGATaGGTGTTTAGATCAGGAGTT | + |
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Preference number: 2 (lower is better) Translates to: RGRGEGLIRARSSSLLWKVGVGG*VFRSGV Trigger: AACTCCTGATCTAAACACCCATCCTCCAACTCCTAC...TTTCCACAGTAATGAGCTCGACCTTGCTCTTATTAGTCCCTCACCCCTGCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR CAA 90 bp | TGTGGCTTTAGGGGGACAGCTGATCTTTGGCAAGAGGCCTCATGCTaGGCCAATGTGAGAAAGCCATTCAACTATAATTTCAGCAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: CGFRGTADLWQEASC*ANVRKPFNYNFSKE Trigger: TTCTTTGCTGAAATTATAGTTGAATGGCTTTCTCACATTGGCCAAGCATGAGGCCTCTTGCCAAAGATCAGCTGTCCCCCTAAAGCCACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR-3UTR TCA 90 bp | GGAAGATATCCTGTCTTTATTAAAGTGTCCCATCTTTATATAAGTGACCCCCTTTTGGTCCCCGAACTCTaGAGACCCTCCATTATAATG | + |
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Preference number: 2 (lower is better) Translates to: GRYPVFIKVSHLYISDPLLVPEL*RPSIIM Trigger: CATTATAATGGAGGGTCTTCAGAGTTCGGGGACCAA...AAGGGGGTCACTTATATAAAGATGGGACACTTTAATAAAGACAGGATATCTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR-3UTR TCA 90 bp | GGAAGATATCCTGTCTTTATTAAAGTGTCCCATCTTTATATAAGTGACCCCCTTAAAGTAAAGCTGTTCTaGTCGAAGCAAGAGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: GRYPVFIKVSHLYISDPLKVKLF*SKQEEE Trigger: CTCCTCCTCTTGCTTCGATCAGAACAGCTTTACTTT...AAGGGGGTCACTTATATAAAGATGGGACACTTTAATAAAGACAGGATATCTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR TCA 72 bp | AGGCCCCTGCTCCTGAATTCTGGCCATCAGCACTGCTaGGAATCTGCTAGACTTGGTCCCCGAACTCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: RPLLLNSGHQHC*ESARLGPRTLK Trigger: CTTCAGAGTTCGGGGACCAAGTCTAGCAGATTCTCAGCAGTGCTGATGGCCAGAATTCAGGAGCAGGGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR TCA 72 bp | CCAGTTAATACGCAGTGGGTGAGAAGCCTAACTCTATaGGACCCCACCCCAACCACCATCTTTCAGGCAGGC | + |
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Preference number: 3 (lower is better) Translates to: PVNTQWVRSLTL*DPTPTTIFQAG Trigger: GCCTGCCTGAAAGATGGTGGTTGGGGTGGGGTCTCATAGAGTTAGGCTTCTCACCCACTGCGTATTAACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR-3UTR CAA 90 bp | CACCCCAACCACCATCTTTCAGGCAGGCAGACCCCAGAATCTGCCCTGAGTGGAGAAAAACTGTATAATTaGTCCAAGATCCCCACTGAG | + |
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Preference number: 3 (lower is better) Translates to: HPNHHLSGRQTPESALSGEKLYN*SKIPTE Trigger: CTCAGTGGGGATCTTGGACAAATTATACAGTTTTTC...TCCACTCAGGGCAGATTCTGGGGTCTGCCTGCCTGAAAGATGGTGGTTGGGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR-3UTR CAA 90 bp | GGTGAGAAGCCTAACTCTATGAGACCCCACCCCAACCACCATCTTTCAGGCAGGTGTTTAGATCAGGAGTaGGAGACACCCACTAGCTTA | + |
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Preference number: 3 (lower is better) Translates to: GEKPNSMRPHPNHHLSGRCLDQE*ETPTSL Trigger: TAAGCTAGTGGGTGTCTCCAACTCCTGATCTAAACA...CCTGCCTGAAAGATGGTGGTTGGGGTGGGGTCTCATAGAGTTAGGCTTCTCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR TCA 72 bp | ACTGCTGAGAATCTGCTAGACTTGGTCCCCGAACTCTaGAGACCCTCCATTATAATGCCTCCCAGAGATTTT | + |
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Preference number: 3 (lower is better) Translates to: TAENLLDLVPEL*RPSIIMPPRDF Trigger: AAAATCTCTGGGAGGCATTATAATGGAGGGTCTTCAGAGTTCGGGGACCAAGTCTAGCAGATTCTCAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR GCA 72 bp | TTTAGGGGGACAGCTGATCTTTGGCAAGAGGCCTCATaGTTGGCCAATGTGAGAAAGCCATTCAACTATAAT | + |
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Preference number: 3 (lower is better) Translates to: FRGTADLWQEAS*LANVRKPFNYN Trigger: ATTATAGTTGAATGGCTTTCTCACATTGGCCAAGCATGAGGCCTCTTGCCAAAGATCAGCTGTCCCCCTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR TCA 72 bp | CTGATCTTTGGCAAGAGGCCTCATGCTTGGCCAATGTaGGAAAGCCATTCAACTATAATTTCAGCAAAGAAC | + |
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Preference number: 3 (lower is better) Translates to: LIFGKRPHAWPM*ESHSTIISAKN Trigger: GTTCTTTGCTGAAATTATAGTTGAATGGCTTTCTCACATTGGCCAAGCATGAGGCCTCTTGCCAAAGATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR TCA 72 bp | AACTTTGGGGTCCTGGGTTTCACTATGATAAACCAATaGTCTTGCCCAAACCCTGAGTTTTATAGATGGAAA | + |
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Preference number: 3 (lower is better) Translates to: NFGVLGFTMINQ*SCPNPEFYRWK Trigger: TTTCCATCTATAAAACTCAGGGTTTGGGCAAGATCATTGGTTTATCATAGTGAAACCCAGGACCCCAAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR CCA 90 bp | CCCAACCACCATCTTTCAGGCAGGCAGACCCCAGAATCTGCCCTGAGTGGAAAGCAGCCTGAGCCCGTCTaGTCCTGCGACTTGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: PNHHLSGRQTPESALSGKQPEPV*SCDLVG Trigger: CCCCACCAAGTCGCAGGACCAGACGGGCTCAGGCTG...CTTTCCACTCAGGGCAGATTCTGGGGTCTGCCTGCCTGAAAGATGGTGGTTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR CCA 90 bp | TCTGCTAGACTTGGTCCCCGAACTCTGAAGACCCTCCATTATAATGCCTCCCAGGCGACTTGGTGGGGCTaGGCGCCCGGGAGAAGGTGT | + |
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Preference number: 4 (lower is better) Translates to: SARLGPRTLKTLHYNASQATWWG*APGRRC Trigger: ACACCTTCTCCCGGGCGCCCAGCCCCACCAAGTCGC...CTGGGAGGCATTATAATGGAGGGTCTTCAGAGTTCGGGGACCAAGTCTAGCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR CCA 90 bp | AGGGTGGGCAAAGAAGCTAATTTAAGGCTGCAGCTAGAGAAAGTGGGAGATCATTCTGGTCCTGCGACTTaGTGGGGCTGGGCGCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: RVGKEANLRLQLEKVGDHSGPAT*WGWAPG Trigger: CCCGGGCGCCCAGCCCCACCAAGTCGCAGGACCAGA...ATGATCTCCCACTTTCTCTAGCTGCAGCCTTAAATTAGCTTCTTTGCCCACCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR TCA 90 bp | AAAGTCCCTGAGGCACCTACGCAGAACTTTGGGGTCCTGGGTTTCACTATGATAGCAGAAGTTCCAGCCTaGGCCCGTCTGGTCCTGCGA | + |
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Preference number: 4 (lower is better) Translates to: KVPEAPTQNFGVLGFTMIAEVPA*ARLVLR Trigger: TCGCAGGACCAGACGGGCTCAGGCTGGAACTTCTGC...TATCATAGTGAAACCCAGGACCCCAAAGTTCTGCGTAGGTGCCTCAGGGACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR TCA 90 bp | GGTGAGAAGCCTAACTCTATGAGACCCCACCCCAACCACCATCTTTCAGGCAGGGTCCAAGATCCCCACTaGGTCAGTGACATCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: GEKPNSMRPHPNHHLSGRVQDPH*VSDITS Trigger: GCTGGTGATGTCACTGACTCAGTGGGGATCTTGGAC...CCTGCCTGAAAGATGGTGGTTGGGGTGGGGTCTCATAGAGTTAGGCTTCTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR GCA 90 bp | AGGGTGGGCAAAGAAGCTAATTTAAGGCTGCAGCTAGAGAAAGTGGGAGATCATCAGAACTCTCCGCGGTaGCGCCGGTTGTCCTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: RVGKEANLRLQLEKVGDHQNSPR*RRLSWR Trigger: CCGCCAGGACAACCGGCGGCACCGCGGAGAGTTCTG...ATGATCTCCCACTTTCTCTAGCTGCAGCCTTAAATTAGCTTCTTTGCCCACCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR GCA 90 bp | ACTTTCCAAATCCAAAAGTCCCTGAGGCACCTACGCAGAACTTTGGGGTCCTGGGAGGCCCCTCAAAAGTaGAGCTTGCTGCCTGTCCCC | + |
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Preference number: 4 (lower is better) Translates to: TFQIQKSLRHLRRTLGSWEAPQK*SLLPVP Trigger: GGGGACAGGCAGCAAGCTGCACTTTTGAGGGGCCTC...CCAGGACCCCAAAGTTCTGCGTAGGTGCCTCAGGGACTTTTGGATTTGGAAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR CCA 90 bp | CCCCACTGTCAGAAAGTGTCTCCTCCCATTTCAAGCCATATCACATCTCATTTTGGTCCTGCGACTTGGTaGGGCTGGGCGCCCGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: PHCQKVSPPISSHITSHFGPATW*GWAPGR Trigger: TCTCCCGGGCGCCCAGCCCCACCAAGTCGCAGGACC...AAAATGAGATGTGATATGGCTTGAAATGGGAGGAGACACTTTCTGACAGTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR CCA 90 bp | ACTTTCCAAATCCAAAAGTCCCTGAGGCACCTACGCAGAACTTTGGGGTCCTGGCAGCACCAGGAGCAGTaGAACCTGCCTGAAGCATGC | + |
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Preference number: 4 (lower is better) Translates to: TFQIQKSLRHLRRTLGSWQHQEQ*NLPEAC Trigger: GCATGCTTCAGGCAGGTTCCACTGCTCCTGGTGCTG...CCAGGACCCCAAAGTTCTGCGTAGGTGCCTCAGGGACTTTTGGATTTGGAAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR CCA 90 bp | TTCAAGGGAAACCTCTGCTGCGTGTGTGAAGGCAGAATCACGGATGAGGCTCACGAGACCCTGTGTACCTaGCAGCAAAGGAACAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: FKGNLCCVCEGRITDEAHETLCT*QQRNSL Trigger: CAGGCTGTTCCTTTGCTGCCAGGTACACAGGGTCTC...GTGAGCCTCATCCGTGATTCTGCCTTCACACACGCAGCAGAGGTTTCCCTTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR CAA 72 bp | ACCTGGCAGCAAAGGAACAGCCTGATCTCCCACCTCTaGCACTTCAAGGGAAACCTCTGCTGCGTGTGTGAA | + |
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Preference number: 4 (lower is better) Translates to: TWQQRNSLISHL*HFKGNLCCVCE Trigger: TTCACACACGCAGCAGAGGTTTCCCTTGAAGTGCAAGAGGTGGGAGATCAGGCTGTTCCTTTGCTGCCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR TCA 90 bp | ACTTTCCAAATCCAAAAGTCCCTGAGGCACCTACGCAGAACTTTGGGGTCCTGGAGAAGCCTAACTCTATaGGACCCCACCCCAACCACC | + |
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Preference number: 4 (lower is better) Translates to: TFQIQKSLRHLRRTLGSWRSLTL*DPTPTT Trigger: GGTGGTTGGGGTGGGGTCTCATAGAGTTAGGCTTCT...CCAGGACCCCAAAGTTCTGCGTAGGTGCCTCAGGGACTTTTGGATTTGGAAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR CCA 90 bp | AAAGTCCCTGAGGCACCTACGCAGAACTTTGGGGTCCTGGGTTTCACTATGATAACCCTCGACAGGCTCTaGGCCCAACCACGGAATCTT | + |
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Preference number: 4 (lower is better) Translates to: KVPEAPTQNFGVLGFTMITLDRL*AQPRNL Trigger: AAGATTCCGTGGTTGGGCCCAGAGCCTGTCGAGGGT...TATCATAGTGAAACCCAGGACCCCAAAGTTCTGCGTAGGTGCCTCAGGGACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR TCA 90 bp | AAAGTCCCTGAGGCACCTACGCAGAACTTTGGGGTCCTGGGTTTCACTATGATAAGAACTGCAGGTAGATaGTCAGCAGCAGGACCGTGG | + |
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Preference number: 4 (lower is better) Translates to: KVPEAPTQNFGVLGFTMIRTAGR*SAAGPW Trigger: CCACGGTCCTGCTGCTGATCATCTACCTGCAGTTCT...TATCATAGTGAAACCCAGGACCCCAAAGTTCTGCGTAGGTGCCTCAGGGACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR GCA 90 bp | CCCCACTGTCAGAAAGTGTCTCCTCCCATTTCAAGCCATATCACATCTCATTTTGAGAGTGAGGGTAGGTaGAGGGCAGGGCAGCGCAGT | + |
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Preference number: 4 (lower is better) Translates to: PHCQKVSPPISSHITSHFESEGR*RAGQRS Trigger: ACTGCGCTGCCCTGCCCTGCACCTACCCTCACTCTC...AAAATGAGATGTGATATGGCTTGAAATGGGAGGAGACACTTTCTGACAGTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR GCA 90 bp | TCTGCTAGACTTGGTCCCCGAACTCTGAAGACCCTCCATTATAATGCCTCCCAGTGCAATTCCAGGTACTaGTTCCAACCAGGGCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: SARLGPRTLKTLHYNASQCNSRY*FQPGLS Trigger: GCTGAGCCCTGGTTGGAAGCAGTACCTGGAATTGCA...CTGGGAGGCATTATAATGGAGGGTCTTCAGAGTTCGGGGACCAAGTCTAGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR CCA 90 bp | GGTGAGAAGCCTAACTCTATGAGACCCCACCCCAACCACCATCTTTCAGGCAGGACCTACGCAGAACTTTaGGGTCCTGGGTTTCACTAT | + |
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Preference number: 4 (lower is better) Translates to: GEKPNSMRPHPNHHLSGRTYAEL*GPGFHY Trigger: ATAGTGAAACCCAGGACCCCAAAGTTCTGCGTAGGT...CCTGCCTGAAAGATGGTGGTTGGGGTGGGGTCTCATAGAGTTAGGCTTCTCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR CCA 90 bp | CCCAACCACCATCTTTCAGGCAGGCAGACCCCAGAATCTGCCCTGAGTGGAAAGGTAGGAGTTGGAGGATaGGTGTTTAGATCAGGAGTT | + |
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Preference number: 4 (lower is better) Translates to: PNHHLSGRQTPESALSGKVGVGG*VFRSGV Trigger: AACTCCTGATCTAAACACCCATCCTCCAACTCCTAC...CTTTCCACTCAGGGCAGATTCTGGGGTCTGCCTGCCTGAAAGATGGTGGTTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR TCA 90 bp | AGGGTGGGCAAAGAAGCTAATTTAAGGCTGCAGCTAGAGAAAGTGGGAGATCATAGGCAGAATCACGGATaGGGCTCACAGGGTGGGCAA | + |
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Preference number: 4 (lower is better) Translates to: RVGKEANLRLQLEKVGDHRQNHG*GSQGGQ Trigger: TTGCCCACCCTGTGAGCCTCATCCGTGATTCTGCCT...ATGATCTCCCACTTTCTCTAGCTGCAGCCTTAAATTAGCTTCTTTGCCCACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR TCA 90 bp | AGGGTGGGCAAAGAAGCTAATTTAAGGCTGCAGCTAGAGAAAGTGGGAGATCATCGCCCTCTCTCTTGCTaGAGATACCCCATCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: RVGKEANLRLQLEKVGDHRPLSC*RYPIPV Trigger: CACAGGGATGGGGTATCTTCAGCAAGAGAGAGGGCG...ATGATCTCCCACTTTCTCTAGCTGCAGCCTTAAATTAGCTTCTTTGCCCACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR GCA 90 bp | TTCAAGGGAAACCTCTGCTGCGTGTGTGAAGGCAGAATCACGGATGAGGCTCACAACCTGCCTGAAGCATaGAATTCCAGGTACTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: FKGNLCCVCEGRITDEAHNLPEA*NSRYCF Trigger: GAAGCAGTACCTGGAATTGCATGCTTCAGGCAGGTT...GTGAGCCTCATCCGTGATTCTGCCTTCACACACGCAGCAGAGGTTTCCCTTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR GCA 90 bp | TCTGCTAGACTTGGTCCCCGAACTCTGAAGACCCTCCATTATAATGCCTCCCAGAGGAGCAGTGGAACCTaGCTGAAGCATGCAATTCCA | + |
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Preference number: 4 (lower is better) Translates to: SARLGPRTLKTLHYNASQRSSGT*LKHAIP Trigger: TGGAATTGCATGCTTCAGGCAGGTTCCACTGCTCCT...CTGGGAGGCATTATAATGGAGGGTCTTCAGAGTTCGGGGACCAAGTCTAGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR GCA 90 bp | AAAGTCCCTGAGGCACCTACGCAGAACTTTGGGGTCCTGGGTTTCACTATGATAGCAGACCCCAGAATCTaGCCTGAGTGGAAAGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: KVPEAPTQNFGVLGFTMIADPRI*PEWKEA Trigger: AGCTTCTTTCCACTCAGGGCAGATTCTGGGGTCTGC...TATCATAGTGAAACCCAGGACCCCAAAGTTCTGCGTAGGTGCCTCAGGGACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR GCA 90 bp | GCCTACTTTCCAAATCCAAAAGTCCCTGAGGCACCTACGCAGAACTTTGGGGTCTCTCCCACATATCTGTaGACTTCCCCATGGACAAAG | + |
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Preference number: 4 (lower is better) Translates to: AYFPNPKVPEAPTQNFGVSPTYL*TSPWTK Trigger: CTTTGTCCATGGGGAAGTGCACAGATATGTGGGAGA...GACCCCAAAGTTCTGCGTAGGTGCCTCAGGGACTTTTGGATTTGGAAAGTAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR TCA 90 bp | ACTTTCCAAATCCAAAAGTCCCTGAGGCACCTACGCAGAACTTTGGGGTCCTGGAAAGTAAAGCTGTTCTaGTCGAAGCAAGAGGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: TFQIQKSLRHLRRTLGSWKVKLF*SKQEEE Trigger: CTCCTCCTCTTGCTTCGATCAGAACAGCTTTACTTT...CCAGGACCCCAAAGTTCTGCGTAGGTGCCTCAGGGACTTTTGGATTTGGAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR TCA 90 bp | TTCAAGGGAAACCTCTGCTGCGTGTGTGAAGGCAGAATCACGGATGAGGCTCACCATGCTTGGCCAATGTaGGAAAGCCATTCAACTATA | + |
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Preference number: 4 (lower is better) Translates to: FKGNLCCVCEGRITDEAHHAWPM*ESHSTI Trigger: TATAGTTGAATGGCTTTCTCACATTGGCCAAGCATG...GTGAGCCTCATCCGTGATTCTGCCTTCACACACGCAGCAGAGGTTTCCCTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR CCA 90 bp | AGGGGCAGGGGTGAGGGACTAATAAGAGCAAGGTCGAGCTCATTACTGTGGAAATCTTCCACTCATCTGTaGTCACGCTTTTACACATGG | + |
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Preference number: 4 (lower is better) Translates to: RGRGEGLIRARSSSLLWKSSTHL*SRFYTW Trigger: CCATGTGTAAAAGCGTGACCACAGATGAGTGGAAGA...TTTCCACAGTAATGAGCTCGACCTTGCTCTTATTAGTCCCTCACCCCTGCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR TCA 90 bp | TGTTTAGATCAGGAGTTGGAGACACCCACTAGCTTAGCCTACTTTCCAAATCCAGCAGTGGAACCTGCCTaGAGCATGCAATTCCAGGTA | + |
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Preference number: 4 (lower is better) Translates to: CLDQELETPTSLAYFPNPAVEPA*SMQFQV Trigger: TACCTGGAATTGCATGCTTCAGGCAGGTTCCACTGC...TGGATTTGGAAAGTAGGCTAAGCTAGTGGGTGTCTCCAACTCCTGATCTAAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR TCA 90 bp | CCCCACTGTCAGAAAGTGTCTCCTCCCATTTCAAGCCATATCACATCTCATTTTGGCCATCAGCACTGCTaGGAATCTGCTAGACTTGGT | + |
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Preference number: 4 (lower is better) Translates to: PHCQKVSPPISSHITSHFGHQHC*ESARLG Trigger: ACCAAGTCTAGCAGATTCTCAGCAGTGCTGATGGCC...AAAATGAGATGTGATATGGCTTGAAATGGGAGGAGACACTTTCTGACAGTGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR GCA 90 bp | AGGGTGGGCAAAGAAGCTAATTTAAGGCTGCAGCTAGAGAAAGTGGGAGATCATCTCAAAAGTGCAGCTTaGTGCCTGTCCCCACCAATT | + |
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Preference number: 4 (lower is better) Translates to: RVGKEANLRLQLEKVGDHLKSAA*CLSPPI Trigger: AATTGGTGGGGACAGGCAGCAAGCTGCACTTTTGAG...ATGATCTCCCACTTTCTCTAGCTGCAGCCTTAAATTAGCTTCTTTGCCCACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR CCA 90 bp | TGTTTAGATCAGGAGTTGGAGACACCCACTAGCTTAGCCTACTTTCCAAATCCACCTGCTCCTGAATTCTaGCCATCAGCACTGCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: CLDQELETPTSLAYFPNPPAPEF*PSALLR Trigger: TCTCAGCAGTGCTGATGGCCAGAATTCAGGAGCAGG...TGGATTTGGAAAGTAGGCTAAGCTAGTGGGTGTCTCCAACTCCTGATCTAAACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR GCA 90 bp | CCCCACTGTCAGAAAGTGTCTCCTCCCATTTCAAGCCATATCACATCTCATTTTAAGGGAAACCTCTGCTaGGTGTGTGAAGGCAGAATC | + |
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Preference number: 4 (lower is better) Translates to: PHCQKVSPPISSHITSHFKGNLC*VCEGRI Trigger: GATTCTGCCTTCACACACGCAGCAGAGGTTTCCCTT...AAAATGAGATGTGATATGGCTTGAAATGGGAGGAGACACTTTCTGACAGTGGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR CCA 90 bp | GGAAGATATCCTGTCTTTATTAAAGTGTCCCATCTTTATATAAGTGACCCCCTTTCAGCAGCAGGACCGTaGCCCAAAACAAGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: GRYPVFIKVSHLYISDPLSAAGP*PKTSTR Trigger: CCTGGTGCTTGTTTTGGGCCACGGTCCTGCTGCTGA...AAGGGGGTCACTTATATAAAGATGGGACACTTTAATAAAGACAGGATATCTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR CCA 90 bp | CCCCACTGTCAGAAAGTGTCTCCTCCCATTTCAAGCCATATCACATCTCATTTTCCAGTTAATACGCAGTaGGTGAGAAGCCTAACTCTA | + |
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Preference number: 4 (lower is better) Translates to: PHCQKVSPPISSHITSHFPVNTQ*VRSLTL Trigger: TAGAGTTAGGCTTCTCACCCACTGCGTATTAACTGG...AAAATGAGATGTGATATGGCTTGAAATGGGAGGAGACACTTTCTGACAGTGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR TCA 90 bp | TGCCCAAACCCTGAGTTTTATAGATGGAAAAACTGTATAATTTGTCCAAGATCCAGCAAAGGAACAGCCTaGTCTCCCACCTCTTGCACT | + |
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Preference number: 4 (lower is better) Translates to: CPNPEFYRWKNCIICPRSSKGTA*SPTSCT Trigger: AGTGCAAGAGGTGGGAGATCAGGCTGTTCCTTTGCT...GGATCTTGGACAAATTATACAGTTTTTCCATCTATAAAACTCAGGGTTTGGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR CCA 90 bp | TGCCCAAACCCTGAGTTTTATAGATGGAAAAACTGTATAATTTGTCCAAGATCCGGGACAGCTGATCTTTaGCAAGAGGCCTCATGCTTG | + |
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Preference number: 4 (lower is better) Translates to: CPNPEFYRWKNCIICPRSGTADL*QEASCL Trigger: CAAGCATGAGGCCTCTTGCCAAAGATCAGCTGTCCC...GGATCTTGGACAAATTATACAGTTTTTCCATCTATAAAACTCAGGGTTTGGGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR GCA 90 bp | GGAAGATATCCTGTCTTTATTAAAGTGTCCCATCTTTATATAAGTGACCCCCTTTTCAAGGGAAACCTCTaGTGCGTGTGTGAAGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: GRYPVFIKVSHLYISDPLFKGNL*CVCEGR Trigger: TCTGCCTTCACACACGCAGCAGAGGTTTCCCTTGAA...AAGGGGGTCACTTATATAAAGATGGGACACTTTAATAAAGACAGGATATCTTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| 3UTR CAA 72 bp | AGAGCAAGGTCGAGCTCATTACTGTGGAAAGCCCTTTaGAGATCACCCAGTCCTCTAATTTTCAAACTTTTT | + |
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Preference number: 4 (lower is better) Translates to: RARSSSLLWKAL*RSPSPLIFKLF Trigger: AAAAAGTTTGAAAATTAGAGGACTGGGTGATCTCAAAAGGGCTTTCCACAGTAATGAGCTCGACCTTGCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR TCA 90 bp | TGCCCAAACCCTGAGTTTTATAGATGGAAAAACTGTATAATTTGTCCAAGATCCCCATCTTTATATAAGTaGCCCCCTTCCTCCATCACT | + |
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Preference number: 4 (lower is better) Translates to: CPNPEFYRWKNCIICPRSPSLYK*PPSSIT Trigger: AGTGATGGAGGAAGGGGGTCACTTATATAAAGATGG...GGATCTTGGACAAATTATACAGTTTTTCCATCTATAAAACTCAGGGTTTGGGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR CAA 90 bp | TCTGCTAGACTTGGTCCCCGAACTCTGAAGACCCTCCATTATAATGCCTCCCAGGTCTGGTCCTGCGACTaGGTGGGGCTGGGCGCCCGG | + |
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Preference number: 5 (lower is better) Translates to: SARLGPRTLKTLHYNASQVWSCD*VGLGAR Trigger: CCGGGCGCCCAGCCCCACCAAGTCGCAGGACCAGAC...CTGGGAGGCATTATAATGGAGGGTCTTCAGAGTTCGGGGACCAAGTCTAGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR CAA 90 bp | CACCCCAACCACCATCTTTCAGGCAGGCAGACCCCAGAATCTGCCCTGAGTGGACACCTACGCAGAACTTaGGGGTCCTGGGTTTCACTA | + |
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Preference number: 5 (lower is better) Translates to: HPNHHLSGRQTPESALSGHLRRT*GSWVSL Trigger: TAGTGAAACCCAGGACCCCAAAGTTCTGCGTAGGTG...TCCACTCAGGGCAGATTCTGGGGTCTGCCTGCCTGAAAGATGGTGGTTGGGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR CAA 90 bp | GGTGAGAAGCCTAACTCTATGAGACCCCACCCCAACCACCATCTTTCAGGCAGGCTGTGGAAAGCCCTTTaGAGATCACCCAGTCCTCTA | + |
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Preference number: 5 (lower is better) Translates to: GEKPNSMRPHPNHHLSGRLWKAL*RSPSPL Trigger: TAGAGGACTGGGTGATCTCAAAAGGGCTTTCCACAG...CCTGCCTGAAAGATGGTGGTTGGGGTGGGGTCTCATAGAGTTAGGCTTCTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR CAA 90 bp | AGGGGCAGGGGTGAGGGACTAATAAGAGCAAGGTCGAGCTCATTACTGTGGAAACTGATCTCCCACCTCTaGCACTTCAAGGGAAACCTC | + |
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Preference number: 5 (lower is better) Translates to: RGRGEGLIRARSSSLLWKLISHL*HFKGNL Trigger: GAGGTTTCCCTTGAAGTGCAAGAGGTGGGAGATCAG...TTTCCACAGTAATGAGCTCGACCTTGCTCTTATTAGTCCCTCACCCCTGCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR CAA 90 bp | AAAGTCCCTGAGGCACCTACGCAGAACTTTGGGGTCCTGGGTTTCACTATGATACAAGAGGCCTCATGCTaGGCCAATGTGAGAAAGCCA | + |
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Preference number: 5 (lower is better) Translates to: KVPEAPTQNFGVLGFTMIQEASC*ANVRKP Trigger: TGGCTTTCTCACATTGGCCAAGCATGAGGCCTCTTG...TATCATAGTGAAACCCAGGACCCCAAAGTTCTGCGTAGGTGCCTCAGGGACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR CAA 90 bp | CACCCCAACCACCATCTTTCAGGCAGGCAGACCCCAGAATCTGCCCTGAGTGGACAGAGATTTTGTGCTTaGCTTCTAAAACTCTGTCTT | + |
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Preference number: 5 (lower is better) Translates to: HPNHHLSGRQTPESALSGQRFCA*LLKLCL Trigger: AAGACAGAGTTTTAGAAGCAAAGCACAAAATCTCTG...TCCACTCAGGGCAGATTCTGGGGTCTGCCTGCCTGAAAGATGGTGGTTGGGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR CAA 90 bp | TGTTTAGATCAGGAGTTGGAGACACCCACTAGCTTAGCCTACTTTCCAAATCCATTAACGCCCTCTCTCTaGCTGAAGATACCCCATCCC | + |
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Preference number: 5 (lower is better) Translates to: CLDQELETPTSLAYFPNPLTPSL*LKIPHP Trigger: GGGATGGGGTATCTTCAGCAAGAGAGAGGGCGTTAA...TGGATTTGGAAAGTAGGCTAAGCTAGTGGGTGTCTCCAACTCCTGATCTAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR CAA 90 bp | TCTGCTAGACTTGGTCCCCGAACTCTGAAGACCCTCCATTATAATGCCTCCCAGGAAAAACTGTATAATTaGTCCAAGATCCCCACTGAG | + |
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Preference number: 5 (lower is better) Translates to: SARLGPRTLKTLHYNASQEKLYN*SKIPTE Trigger: CTCAGTGGGGATCTTGGACAAATTATACAGTTTTTC...CTGGGAGGCATTATAATGGAGGGTCTTCAGAGTTCGGGGACCAAGTCTAGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS-3UTR CAA 90 bp | CCCCACTGTCAGAAAGTGTCTCCTCCCATTTCAAGCCATATCACATCTCATTTTTGTTTAGATCAGGAGTaGGAGACACCCACTAGCTTA | + |
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Preference number: 5 (lower is better) Translates to: PHCQKVSPPISSHITSHFCLDQE*ETPTSL Trigger: TAAGCTAGTGGGTGTCTCCAACTCCTGATCTAAACA...AAAATGAGATGTGATATGGCTTGAAATGGGAGGAGACACTTTCTGACAGTGGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS CCA 72 bp | AGCCTGAGCCCGTCTGGTCCTGCGACTTGGTGGGGCTaGGCGCCCGGGAGAAGGTGTAGGTGGTCGCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SLSPSGPATWWG*APGRRCRWSPP Trigger: AGGAGGCGACCACCTACACCTTCTCCCGGGCGCCCAGCCCCACCAAGTCGCAGGACCAGACGGGCTCAGGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS CCA 72 bp | AGAAGTTCCAGCCTGAGCCCGTCTGGTCCTGCGACTTaGTGGGGCTGGGCGCCCGGGAGAAGGTGTAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: RSSSLSPSGPAT*WGWAPGRRCRW Trigger: CCACCTACACCTTCTCCCGGGCGCCCAGCCCCACCAAGTCGCAGGACCAGACGGGCTCAGGCTGGAACTTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS GCA 72 bp | CAGTGGAACCTGCCTGAAGCATGCAATTCCAGGTACTaGTTCCAACCAGGGCTCAGCACATTGTGCTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: QWNLPEACNSRY*FQPGLSTLCLR Trigger: CCTCAAGCACAATGTGCTGAGCCCTGGTTGGAAGCAGTACCTGGAATTGCATGCTTCAGGCAGGTTCCACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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| CDS TCA 72 bp | CTTATACGGAGCTACGGAAAGAGAACTGCAGGTAGATaGTCAGCAGCAGGACCGTGGCCCAAAACAAGCACC | + |
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Preference number: 6 (lower is better) Translates to: LIRSYGKRTAGR*SAAGPWPKTST Trigger: GGTGCTTGTTTTGGGCCACGGTCCTGCTGCTGATCATCTACCTGCAGTTCTCTTTCCGTAGCTCCGTATAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000312295.5 |
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