RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RTL5 (Homo sapiens)

Ensembl gene IDs: ENSG00000242732

Ensembl transcript IDs: ENST00000479991.1, ENST00000609883.1

Found 489 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AATGTTGGGCGCTGTCCACCGGGGGTGCCCAGGAGGGCAATGTGGTaGGAGGAAAGGGCTCCAGATGTGTGGCAAGTCAGTCCAAGAGCC +
Preference number: 1 (lower is better)
Translates to: NVGRCPPGVPRRAMW*EERAPDVWQVSPRA
Trigger: GGCTCTTGGACTGACTTGCCACACATCTGGAGCCCTTTCCTCTCACCACATTGCCCTCCTGGGCACCCCCGGTGGACAGCGCCCAACATT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CCA 90 bp GCCAAGAGGGCAGCTATTGCTGATCCCTCCTTTCCCAGGTGGCCCTaGTTGGGCACACGTCGCTCTCTGGTCACGGTTGCAAGATGGTCT +
Preference number: 1 (lower is better)
Translates to: AKRAAIADPSFPRWP*LGTRRSLVTVARWS
Trigger: AGACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGCCCAACCAGGGCCACCTGGGAAAGGAGGGATCAGCAATAGCTGCCCTCTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CCA 90 bp GGAAGAGGGTCAAAGGGAAGCCCAAGCCCCTCCTGCCCCAGAGGGTaGAAACCAGCTCACTGCTCATCTGCTCTATCCCTGGCTGTAGCT +
Preference number: 1 (lower is better)
Translates to: GRGSKGSPSPSCPRG*KPAHCSSALSLAVA
Trigger: AGCTACAGCCAGGGATAGAGCAGATGAGCAGTGAGCTGGTTTCCACCCTCTGGGGCAGGAGGGGCTTGGGCTTCCCTTTGACCCTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR CCA 90 bp AGAGGGCAGCTATTGCTGATCCCTCCTTTCCCAGGTGGCCCTGGTTaGGCACACGTCGCTCTCTGGTCACGGTTGCAAGATGGTCTGGAA +
Preference number: 1 (lower is better)
Translates to: RGQLLLIPPFPGGPG*AHVALWSRLQDGLE
Trigger: TTCCAGACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGCCCAACCAGGGCCACCTGGGAAAGGAGGGATCAGCAATAGCTGCCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CCA 90 bp GTACATGCCAAGAGGGCAGCTATTGCTGATCCCTCCTTTCCCAGGTaGCCCTGGTTGGGCACACGTCGCTCTCTGGTCACGGTTGCAAGA +
Preference number: 1 (lower is better)
Translates to: VHAKRAAIADPSFPR*PWLGTRRSLVTVAR
Trigger: TCTTGCAACCGTGACCAGAGAGCGACGTGTGCCCAACCAGGGCCACCTGGGAAAGGAGGGATCAGCAATAGCTGCCCTCTTGGCATGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR GCA 90 bp TCCCAGGTGGCCCTGGTTGGGCACACGTCGCTCTCTGGTCACGGTTaGAAGATGGTCTGGAATTCTGCAGGTCTTCTTCAGGTTCTGCAG +
Preference number: 1 (lower is better)
Translates to: SQVALVGHTSLSGHG*KMVWNSAGLLQVLQ
Trigger: CTGCAGAACCTGAAGAAGACCTGCAGAATTCCAGACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGCCCAACCAGGGCCACCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR GCA 90 bp CTAACTGGCTACCCTTTAGGCAACATCAAGGAAAGTTGTGGAGCCTaGAATGTTGGGCGCTGTCCACCGGGGGTGCCCAGGAGGGCAATG +
Preference number: 1 (lower is better)
Translates to: LTGYPLGNIKESCGA*NVGRCPPGVPRRAM
Trigger: CATTGCCCTCCTGGGCACCCCCGGTGGACAGCGCCCAACATTGCAGGCTCCACAACTTTCCTTGATGTTGCCTAAAGGGTAGCCAGTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR GCA 90 bp TTTGGCCACAAACCCTGGCTGCACTTGCTCTGCTGCCAGTCACTGTaGAGAAAGTCCAGTGTCCAGGGGCAGTTCAGGCCAGCAGTGGAT +
Preference number: 1 (lower is better)
Translates to: FGHKPWLHLLCCQSL*RKSSVQGQFRPAVD
Trigger: ATCCACTGCTGGCCTGAACTGCCCCTGGACACTGGACTTTCTGCACAGTGACTGGCAGCAGAGCAAGTGCAGCCAGGGTTTGTGGCCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CCA 90 bp CTACCCTTTAGGCAACATCAAGGAAAGTTGTGGAGCCTGCAATGTTaGGCGCTGTCCACCGGGGGTGCCCAGGAGGGCAATGTGGTGAGA +
Preference number: 1 (lower is better)
Translates to: LPFRQHQGKLWSLQC*ALSTGGAQEGNVVR
Trigger: TCTCACCACATTGCCCTCCTGGGCACCCCCGGTGGACAGCGCCCAACATTGCAGGCTCCACAACTTTCCTTGATGTTGCCTAAAGGGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR TCA 90 bp TATGGGAACAGGCCCAGAAACTTGCTCTCCAGCTCGTGGCCGGACTaGGCAGAGTACATGCCAAGAGGGCAGCTATTGCTGATCCCTCCT +
Preference number: 1 (lower is better)
Translates to: YGNRPRNLLSSSWPD*AEYMPRGQLLLIPP
Trigger: AGGAGGGATCAGCAATAGCTGCCCTCTTGGCATGTACTCTGCTCAGTCCGGCCACGAGCTGGAGAGCAAGTTTCTGGGCCTGTTCCCATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR GCA 90 bp TGCTTTCTTCCCTTTGGCCACAAACCCTGGCTGCACTTGCTCTGCTaGCAGTCACTGTGCAGAAAGTCCAGTGTCCAGGGGCAGTTCAGG +
Preference number: 1 (lower is better)
Translates to: CFLPFGHKPWLHLLC*QSLCRKSSVQGQFR
Trigger: CCTGAACTGCCCCTGGACACTGGACTTTCTGCACAGTGACTGGCAGCAGAGCAAGTGCAGCCAGGGTTTGTGGCCAAAGGGAAGAAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CCA 90 bp ATCCCTCCTTTCCCAGGTGGCCCTGGTTGGGCACACGTCGCTCTCTaGTCACGGTTGCAAGATGGTCTGGAATTCTGCAGGTCTTCTTCA +
Preference number: 1 (lower is better)
Translates to: IPPFPGGPGWAHVAL*SRLQDGLEFCRSSS
Trigger: TGAAGAAGACCTGCAGAATTCCAGACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGCCCAACCAGGGCCACCTGGGAAAGGAGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR GCA 90 bp ACTCCAAGGATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGGGCTaGAGTCCAAGGCCTGGCAAGGGGAGAAGACCACCATCCCTAAGG +
Preference number: 1 (lower is better)
Translates to: TPRIESVLQRPLTGG*SPRPGKGRRPPSLR
Trigger: CCTTAGGGATGGTGGTCTTCTCCCCTTGCCAGGCCTTGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGACACTTTCTATCCTTGGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR GCA 90 bp CTATGCTTTCTTCCCTTTGGCCACAAACCCTGGCTGCACTTGCTCTaGTGCCAGTCACTGTGCAGAAAGTCCAGTGTCCAGGGGCAGTTC +
Preference number: 1 (lower is better)
Translates to: LCFLPFGHKPWLHLL*CQSLCRKSSVQGQF
Trigger: GAACTGCCCCTGGACACTGGACTTTCTGCACAGTGACTGGCAGCAGAGCAAGTGCAGCCAGGGTTTGTGGCCAAAGGGAAGAAAGCATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CCA 90 bp TGGCCCTGGTTGGGCACACGTCGCTCTCTGGTCACGGTTGCAAGATaGTCTGGAATTCTGCAGGTCTTCTTCAGGTTCTGCAGGTCTGAA +
Preference number: 1 (lower is better)
Translates to: WPWLGTRRSLVTVAR*SGILQVFFRFCRSE
Trigger: TTCAGACCTGCAGAACCTGAAGAAGACCTGCAGAATTCCAGACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGCCCAACCAGGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CCA 90 bp CTCCGTCAAGTTGTCCATTTGACATGTGGCTTTGCACACTCTCACTaGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGAGGTGT +
Preference number: 1 (lower is better)
Translates to: LRQVVHLTCGFAHSH*ARCRVLFQALCWRC
Trigger: ACACCTCCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAAAGCCACATGTCAAATGGACAACTTGACGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CCA 90 bp CTCTGCAACTCCAAGGATAGAAAGTGTCCTGCAAAGACCTTTGACTaGGGGCTGCAGTCCAAGGCCTGGCAAGGGGAGAAGACCACCATC +
Preference number: 1 (lower is better)
Translates to: LCNSKDRKCPAKTFD*GLQSKAWQGEKTTI
Trigger: GATGGTGGTCTTCTCCCCTTGCCAGGCCTTGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGACACTTTCTATCCTTGGAGTTGCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CCA 90 bp AAGTGTCCTGCAAAGACCTTTGACTGGGGGCTGCAGTCCAAGGCCTaGCAAGGGGAGAAGACCACCATCCCTAAGGAAAGAGTCACTCTT +
Preference number: 1 (lower is better)
Translates to: KCPAKTFDWGLQSKA*QGEKTTIPKERVTL
Trigger: AAGAGTGACTCTTTCCTTAGGGATGGTGGTCTTCTCCCCTTGCCAGGCCTTGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGACACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR TCA 90 bp GCCTGCACAGTCAGTCAAGGGCAAATCTCCGTCAAGTTGTCCATTTaGCATGTGGCTTTGCACACTCTCACTGGGCTAGATGTCGGGTCC +
Preference number: 1 (lower is better)
Translates to: ACTVSQGQISVKLSI*HVALHTLTGLDVGS
Trigger: GGACCCGACATCTAGCCCAGTGAGAGTGTGCAAAGCCACATGTCAAATGGACAACTTGACGGAGATTTGCCCTTGACTGACTGTGCAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR GCA 90 bp GCACACGTCGCTCTCTGGTCACGGTTGCAAGATGGTCTGGAATTCTaGAGGTCTTCTTCAGGTTCTGCAGGTCTGAAACTCCCTGAAGTC +
Preference number: 1 (lower is better)
Translates to: AHVALWSRLQDGLEF*RSSSGSAGLKLPEV
Trigger: GACTTCAGGGAGTTTCAGACCTGCAGAACCTGAAGAAGACCTGCAGAATTCCAGACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR GCA 90 bp TACAAGAGGGTGACCAGTTCATTTATGGGAACAGGCCCAGAAACTTaGTCTCCAGCTCGTGGCCGGACTGAGCAGAGTACATGCCAAGAG +
Preference number: 1 (lower is better)
Translates to: YKRVTSSFMGTGPET*SPARGRTEQSTCQE
Trigger: CTCTTGGCATGTACTCTGCTCAGTCCGGCCACGAGCTGGAGAGCAAGTTTCTGGGCCTGTTCCCATAAATGAACTGGTCACCCTCTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR GCA 90 bp ATTTACTATGCTTTCTTCCCTTTGGCCACAAACCCTGGCTGCACTTaGTCTGCTGCCAGTCACTGTGCAGAAAGTCCAGTGTCCAGGGGC +
Preference number: 1 (lower is better)
Translates to: IYYAFFPLATNPGCT*SAASHCAESPVSRG
Trigger: GCCCCTGGACACTGGACTTTCTGCACAGTGACTGGCAGCAGAGCAAGTGCAGCCAGGGTTTGTGGCCAAAGGGAAGAAAGCATAGTAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR TCA 90 bp CTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGAGGTGTGGCATaGAATGAGTGTAGGATTCTAGGGACATTTCTGGATACCATCCTG +
Preference number: 1 (lower is better)
Translates to: LDVGSSSRPSAGGVA*NECRILGTFLDTIL
Trigger: CAGGATGGTATCCAGAAATGTCCCTAGAATCCTACACTCATTTCATGCCACACCTCCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR GCA 90 bp CCTCTCTCTGTCTGTCCCAGAAGGAATGGCCAATCAGGCCTCCTCTaGAACTCCAAGGATAGAAAGTGTCCTGCAAAGACCTTTGACTGG +
Preference number: 1 (lower is better)
Translates to: PLSVCPRRNGQSGLL*NSKDRKCPAKTFDW
Trigger: CCAGTCAAAGGTCTTTGCAGGACACTTTCTATCCTTGGAGTTGCAGAGGAGGCCTGATTGGCCATTCCTTCTGGGACAGACAGAGAGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CCA 90 bp TCTCCTCCTCCTCTTCTTCCTCCTTCTCCTCTCCGGAACCCTAACTaGCTACCCTTTAGGCAACATCAAGGAAAGTTGTGGAGCCTGCAA +
Preference number: 1 (lower is better)
Translates to: SPPPLLPPSPLRNPN*LPFRQHQGKLWSLQ
Trigger: TTGCAGGCTCCACAACTTTCCTTGATGTTGCCTAAAGGGTAGCCAGTTAGGGTTCCGGAGAGGAGAAGGAGGAAGAAGAGGAGGAGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR TCA 90 bp AAGATGGTCTGGAATTCTGCAGGTCTTCTTCAGGTTCTGCAGGTCTaGAACTCCCTGAAGTCCTGGTCAGCAAATGGGGCAGGTATGGCA +
Preference number: 1 (lower is better)
Translates to: KMVWNSAGLLQVLQV*NSLKSWSANGAGMA
Trigger: TGCCATACCTGCCCCATTTGCTGACCAGGACTTCAGGGAGTTTCAGACCTGCAGAACCTGAAGAAGACCTGCAGAATTCCAGACCATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR TCA 90 bp GGTCCGCCTGAGATTATCGGTCAGACTCCCATGAGGAACAGAGGTTaGATTTACTATGCTTTCTTCCCTTTGGCCACAAACCCTGGCTGC +
Preference number: 1 (lower is better)
Translates to: GPPEIIGQTPMRNRG*IYYAFFPLATNPGC
Trigger: GCAGCCAGGGTTTGTGGCCAAAGGGAAGAAAGCATAGTAAATTCAACCTCTGTTCCTCATGGGAGTCTGACCGATAATCTCAGGCGGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR TCA 90 bp GAGAGGAAAGGGCTCCAGATGTGTGGCAAGTCAGTCCAAGAGCCCTaGTACAGGAATCTGTGCAAAGGTAAACTCAAGTGCTGTAAGTGG +
Preference number: 1 (lower is better)
Translates to: ERKGLQMCGKSVQEP*YRNLCKGKLKCCKW
Trigger: CCACTTACAGCACTTGAGTTTACCTTTGCACAGATTCCTGTATCAGGGCTCTTGGACTGACTTGCCACACATCTGGAGCCCTTTCCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CCA 90 bp CAGAGGTTGAATTTACTATGCTTTCTTCCCTTTGGCCACAAACCCTaGCTGCACTTGCTCTGCTGCCAGTCACTGTGCAGAAAGTCCAGT +
Preference number: 1 (lower is better)
Translates to: QRLNLLCFLPFGHKP*LHLLCCQSLCRKSS
Trigger: ACTGGACTTTCTGCACAGTGACTGGCAGCAGAGCAAGTGCAGCCAGGGTTTGTGGCCAAAGGGAAGAAAGCATAGTAAATTCAACCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR TCA 90 bp GCCCAAGATCCTAAGGTCCGCCTGAGATTATCGGTCAGACTCCCATaGGGAACAGAGGTTGAATTTACTATGCTTTCTTCCCTTTGGCCA +
Preference number: 1 (lower is better)
Translates to: AQDPKVRLRLSVRLP*GTEVEFTMLSSLWP
Trigger: TGGCCAAAGGGAAGAAAGCATAGTAAATTCAACCTCTGTTCCTCATGGGAGTCTGACCGATAATCTCAGGCGGACCTTAGGATCTTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR GCA 90 bp GATTATCGGTCAGACTCCCATGAGGAACAGAGGTTGAATTTACTATaGTTTCTTCCCTTTGGCCACAAACCCTGGCTGCACTTGCTCTGC +
Preference number: 1 (lower is better)
Translates to: DYRSDSHEEQRLNLL*FLPFGHKPWLHLLC
Trigger: GCAGAGCAAGTGCAGCCAGGGTTTGTGGCCAAAGGGAAGAAAGCATAGTAAATTCAACCTCTGTTCCTCATGGGAGTCTGACCGATAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR TCA 90 bp TTCAGTATGCATGACTGCACAGGTGGCAGCCATTTTAAATCCTGCTaGTCAAGAACTGGCAGGGTGATCTCAGCTTTGACAAGACATAGC +
Preference number: 1 (lower is better)
Translates to: FSMHDCTGGSHFKSC*SRTGRVISALTRHS
Trigger: GCTATGTCTTGTCAAAGCTGAGATCACCCTGCCAGTTCTTGATCAGCAGGATTTAAAATGGCTGCCACCTGTGCAGTCATGCATACTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609883.1
3UTR GCA 90 bp GATGGGGAAAACCAGACAATTGAAAGGTCCAACAAATTAGGAGAATaGTTAAATGAATTATTCAGTATGCATGACTGCACAGGTGGCAGC +
Preference number: 1 (lower is better)
Translates to: DGENQTIERSNKLGE*LNELFSMHDCTGGS
Trigger: GCTGCCACCTGTGCAGTCATGCATACTGAATAATTCATTTAAGCATTCTCCTAATTTGTTGGACCTTTCAATTGTCTGGTTTTCCCCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609883.1
3UTR-3UTR CCA 90 bp ATGGGCCCTCTCTCTGTCTGTCCCAGAAGGAATGGCCAATCAGGCCTCCTCTGCCCAGGTGGCCCTGGTTaGGCACACGTCGCTCTCTGG +
Preference number: 2 (lower is better)
Translates to: MGPLSVCPRRNGQSGLLCPGGPG*AHVALW
Trigger: CCAGAGAGCGACGTGTGCCCAACCAGGGCCACCTGG...GCAGAGGAGGCCTGATTGGCCATTCCTTCTGGGACAGACAGAGAGAGGGCCCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CCA 90 bp CACAGGGACATGGGGCAGCAGGGCCAGAGTGTTGACCATCAGCAAACAGGGTCCCCCTCCTTTCCCAGGTaGCCCTGGTTGGGCACACGT +
Preference number: 2 (lower is better)
Translates to: HRDMGQQGQSVDHQQTGSPSFPR*PWLGTR
Trigger: ACGTGTGCCCAACCAGGGCCACCTGGGAAAGGAGGG...GGACCCTGTTTGCTGATGGTCAACACTCTGGCCCTGCTGCCCCATGTCCCTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR-3UTR GCA 90 bp CACAGGGACATGGGGCAGCAGGGCCAGAGTGTTGACCATCAGCAAACAGGGTCCACAGGCCCAGAAACTTaGTCTCCAGCTCGTGGCCGG +
Preference number: 2 (lower is better)
Translates to: HRDMGQQGQSVDHQQTGSTGPET*SPARGR
Trigger: CCGGCCACGAGCTGGAGAGCAAGTTTCTGGGCCTGT...GGACCCTGTTTGCTGATGGTCAACACTCTGGCCCTGCTGCCCCATGTCCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR-3UTR CCA 90 bp TTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGACCCTCCTTTCCCAGGTaGCCCTGGTTGGGCACACGT +
Preference number: 2 (lower is better)
Translates to: LHTLTGLDVGSSSRPSAGPSFPR*PWLGTR
Trigger: ACGTGTGCCCAACCAGGGCCACCTGGGAAAGGAGGG...TCCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CCA 90 bp ATGGGCCCTCTCTCTGTCTGTCCCAGAAGGAATGGCCAATCAGGCCTCCTCTGCCTGCAGTCCAAGGCCTaGCAAGGGGAGAAGACCACC +
Preference number: 2 (lower is better)
Translates to: MGPLSVCPRRNGQSGLLCLQSKA*QGEKTT
Trigger: GGTGGTCTTCTCCCCTTGCCAGGCCTTGGACTGCAG...GCAGAGGAGGCCTGATTGGCCATTCCTTCTGGGACAGACAGAGAGAGGGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CAA 90 bp AAGAGGGCAGCTATTGCTGATCCCTCCTTTCCCAGGTGGCCCTGGTaGGGCACACGTCGCTCTCTGGTCACGGTTGCAAGATGGTCTGGA +
Preference number: 2 (lower is better)
Translates to: KRAAIADPSFPRWPW*GTRRSLVTVARWSG
Trigger: TCCAGACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGCCCAACCAGGGCCACCTGGGAAAGGAGGGATCAGCAATAGCTGCCCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CAA 90 bp CTCCGGAACCCTAACTGGCTACCCTTTAGGCAACATCAAGGAAAGTaGTGGAGCCTGCAATGTTGGGCGCTGTCCACCGGGGGTGCCCAG +
Preference number: 2 (lower is better)
Translates to: LRNPNWLPFRQHQGK*WSLQCWALSTGGAQ
Trigger: CTGGGCACCCCCGGTGGACAGCGCCCAACATTGCAGGCTCCACAACTTTCCTTGATGTTGCCTAAAGGGTAGCCAGTTAGGGTTCCGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CCA 90 bp GTGCTGAAGGGTCCCTGGAAGTGTGGGTTTAAGGCACCCGTCCTTCACACTTCTTGGAGCCTGCAATGTTaGGCGCTGTCCACCGGGGGT +
Preference number: 2 (lower is better)
Translates to: VLKGPWKCGFKAPVLHTSWSLQC*ALSTGG
Trigger: ACCCCCGGTGGACAGCGCCCAACATTGCAGGCTCCA...AGAAGTGTGAAGGACGGGTGCCTTAAACCCACACTTCCAGGGACCCTTCAGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR-3UTR CCA 90 bp CACAGGGACATGGGGCAGCAGGGCCAGAGTGTTGACCATCAGCAAACAGGGTCCTTTGGCCACAAACCCTaGCTGCACTTGCTCTGCTGC +
Preference number: 2 (lower is better)
Translates to: HRDMGQQGQSVDHQQTGSFGHKP*LHLLCC
Trigger: GCAGCAGAGCAAGTGCAGCCAGGGTTTGTGGCCAAA...GGACCCTGTTTGCTGATGGTCAACACTCTGGCCCTGCTGCCCCATGTCCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR-3UTR CCA 90 bp CACAGGGACATGGGGCAGCAGGGCCAGAGTGTTGACCATCAGCAAACAGGGTCCAACCAGTCAGAGGACTaGGTTTCTCTGCGACTCCTC +
Preference number: 2 (lower is better)
Translates to: HRDMGQQGQSVDHQQTGSNQSED*VSLRLL
Trigger: GAGGAGTCGCAGAGAAACCCAGTCCTCTGACTGGTT...GGACCCTGTTTGCTGATGGTCAACACTCTGGCCCTGCTGCCCCATGTCCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR CAA 90 bp TTCCCAGGTGGCCCTGGTTGGGCACACGTCGCTCTCTGGTCACGGTaGCAAGATGGTCTGGAATTCTGCAGGTCTTCTTCAGGTTCTGCA +
Preference number: 2 (lower is better)
Translates to: FPGGPGWAHVALWSR*QDGLEFCRSSSGSA
Trigger: TGCAGAACCTGAAGAAGACCTGCAGAATTCCAGACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGCCCAACCAGGGCCACCTGGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CAA 90 bp GCCTCAGTGGCTTTAGGAGTTCAGGGTAGCCTGTCCTCTTGCTCATaGGGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAG +
Preference number: 2 (lower is better)
Translates to: ASVALGVQGSLSSCS*GQISEALGEVLVGQ
Trigger: CTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCCCAATGAGCAAGAGGACAGGCTACCCTGAACTCCTAAAGCCACTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CAA 90 bp CCTTCACACTTCTCCACAGGGACATGGGGCAGCAGGGCCAGAGTGTaGACCATCAGCAAACAGGGTCCACTGCCTCGAAGAATAGCAGGT +
Preference number: 2 (lower is better)
Translates to: PSHFSTGTWGSRARV*TISKQGPLPRRIAG
Trigger: ACCTGCTATTCTTCGAGGCAGTGGACCCTGTTTGCTGATGGTCAACACTCTGGCCCTGCTGCCCCATGTCCCTGTGGAGAAGTGTGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR-3UTR TCA 90 bp GATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGGGCTGCAGTCCAAGGCCTGGAGCTCGTGGCCGGACTaGGCAGAGTACATGCCAAGA +
Preference number: 2 (lower is better)
Translates to: DRKCPAKTFDWGLQSKAWSSWPD*AEYMPR
Trigger: TCTTGGCATGTACTCTGCTCAGTCCGGCCACGAGCT...CCAGGCCTTGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGACACTTTCTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR TCA 90 bp GTGCTGAAGGGTCCCTGGAAGTGTGGGTTTAAGGCACCCGTCCTTCACACTTCTGCAGGGCCAGAGTGTTaGCCATCAGCAAACAGGGTC +
Preference number: 2 (lower is better)
Translates to: VLKGPWKCGFKAPVLHTSAGPEC*PSANRV
Trigger: GACCCTGTTTGCTGATGGTCAACACTCTGGCCCTGC...AGAAGTGTGAAGGACGGGTGCCTTAAACCCACACTTCCAGGGACCCTTCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR-3UTR GCA 90 bp GTCCCTGGAAGTGTGGGTTTAAGGCACCCGTCCTTCACACTTCTCCACAGGGACAACCCTGGCTGCACTTaGTCTGCTGCCAGTCACTGT +
Preference number: 2 (lower is better)
Translates to: VPGSVGLRHPSFTLLHRDNPGCT*SAASHC
Trigger: ACAGTGACTGGCAGCAGAGCAAGTGCAGCCAGGGTT...GTCCCTGTGGAGAAGTGTGAAGGACGGGTGCCTTAAACCCACACTTCCAGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR-3UTR CCA 90 bp TTTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGGTCCTGGTCAGCAAATaGGGCAGGTATGGCAGCAAT +
Preference number: 2 (lower is better)
Translates to: FAHSHWARCRVLFQALCWVLVSK*GRYGSN
Trigger: ATTGCTGCCATACCTGCCCCATTTGCTGACCAGGAC...CCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CCA 90 bp GGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAAACCAGGTGGCCCTGGTTaGGCACACGTCGCTCTCTGG +
Preference number: 2 (lower is better)
Translates to: GRSVRHWVKSWWVSQRIKPGGPG*AHVALW
Trigger: CCAGAGAGCGACGTGTGCCCAACCAGGGCCACCTGG...TTTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR GCA 90 bp CACAGGGACATGGGGCAGCAGGGCCAGAGTGTTGACCATCAGCAAACAGGGTCCCAATCAGGCCTCCTCTaGAACTCCAAGGATAGAAAG +
Preference number: 2 (lower is better)
Translates to: HRDMGQQGQSVDHQQTGSQSGLL*NSKDRK
Trigger: CTTTCTATCCTTGGAGTTGCAGAGGAGGCCTGATTG...GGACCCTGTTTGCTGATGGTCAACACTCTGGCCCTGCTGCCCCATGTCCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR-3UTR CCA 90 bp GTGCTGAAGGGTCCCTGGAAGTGTGGGTTTAAGGCACCCGTCCTTCACACTTCTAGGGCTCCAGATGTGTaGCAAGTCAGTCCAAGAGCC +
Preference number: 2 (lower is better)
Translates to: VLKGPWKCGFKAPVLHTSRAPDV*QVSPRA
Trigger: GGCTCTTGGACTGACTTGCCACACATCTGGAGCCCT...AGAAGTGTGAAGGACGGGTGCCTTAAACCCACACTTCCAGGGACCCTTCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR-3UTR CCA 90 bp AATAGCAGGTCCCCTCGAAGAATAGCAGGTCCCCTTCTGGAATGCACTCTTGAGCTGCAGTCCAAGGCCTaGCAAGGGGAGAAGACCACC +
Preference number: 2 (lower is better)
Translates to: NSRSPRRIAGPLLECTLELQSKA*QGEKTT
Trigger: GGTGGTCTTCTCCCCTTGCCAGGCCTTGGACTGCAG...CTCAAGAGTGCATTCCAGAAGGGGACCTGCTATTCTTCGAGGGGACCTGCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR-3UTR TCA 90 bp CGGAACCCTAACTGGCTACCCTTTAGGCAACATCAAGGAAAGTTGTGGAGCCTGGAGGGCAGCTATTGCTaGTCCCTCCTTTCCCAGGTG +
Preference number: 2 (lower is better)
Translates to: RNPNWLPFRQHQGKLWSLEGSYC*SLLSQV
Trigger: CACCTGGGAAAGGAGGGATCAGCAATAGCTGCCCTC...CAGGCTCCACAACTTTCCTTGATGTTGCCTAAAGGGTAGCCAGTTAGGGTTCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR TCA 90 bp ATGGGCCCTCTCTCTGTCTGTCCCAGAAGGAATGGCCAATCAGGCCTCCTCTGCGCTGGAGGTGTGGCATaGAATGAGTGTAGGATTCTA +
Preference number: 2 (lower is better)
Translates to: MGPLSVCPRRNGQSGLLCAGGVA*NECRIL
Trigger: TAGAATCCTACACTCATTTCATGCCACACCTCCAGC...GCAGAGGAGGCCTGATTGGCCATTCCTTCTGGGACAGACAGAGAGAGGGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR GCA 90 bp ATGGGCCCTCTCTCTGTCTGTCCCAGAAGGAATGGCCAATCAGGCCTCCTCTGCCTCTCTGGTCACGGTTaGAAGATGGTCTGGAATTCT +
Preference number: 2 (lower is better)
Translates to: MGPLSVCPRRNGQSGLLCLSGHG*KMVWNS
Trigger: AGAATTCCAGACCATCTTGCAACCGTGACCAGAGAG...GCAGAGGAGGCCTGATTGGCCATTCCTTCTGGGACAGACAGAGAGAGGGCCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR GCA 90 bp GGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAAAACAGGCCCAGAAACTTaGTCTCCAGCTCGTGGCCGG +
Preference number: 2 (lower is better)
Translates to: GRSVRHWVKSWWVSQRIKTGPET*SPARGR
Trigger: CCGGCCACGAGCTGGAGAGCAAGTTTCTGGGCCTGT...TTTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR TCA 90 bp GGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAACAGGTTCTGCAGGTCTaGAACTCCCTGAAGTCCTGG +
Preference number: 2 (lower is better)
Translates to: GQISEALGEVLVGQSENKQVLQV*NSLKSW
Trigger: CCAGGACTTCAGGGAGTTTCAGACCTGCAGAACCTG...TTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR TCA 90 bp GGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAAAAGCTCGTGGCCGGACTaGGCAGAGTACATGCCAAGA +
Preference number: 2 (lower is better)
Translates to: GRSVRHWVKSWWVSQRIKSSWPD*AEYMPR
Trigger: TCTTGGCATGTACTCTGCTCAGTCCGGCCACGAGCT...TTTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR TCA 90 bp GCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCTCCTGCAAAGACCTTTaGCTGGGGGCTGCAGTCCAA +
Preference number: 2 (lower is better)
Translates to: AEAVLSGLKASSGSLYKGSCKDL*LGAAVQ
Trigger: TTGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGA...GCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR GCA 90 bp GATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGGGCTGCAGTCCAAGGCCTGGACTGAGCAGAGTACATaGCAAGAGGGCAGCTATTGC +
Preference number: 2 (lower is better)
Translates to: DRKCPAKTFDWGLQSKAWTEQST*QEGSYC
Trigger: GCAATAGCTGCCCTCTTGGCATGTACTCTGCTCAGT...CCAGGCCTTGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGACACTTTCTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR GCA 90 bp GCCTCCTCTGCAACTCCAAGGATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGCTCTTCCAGGCCCTCTaGTGGAGGTGTGGCATGAAA +
Preference number: 2 (lower is better)
Translates to: ASSATPRIESVLQRPLTGLFQAL*WRCGMK
Trigger: TTTCATGCCACACCTCCAGCAGAGGGCCTGGAAGAG...CCCAGTCAAAGGTCTTTGCAGGACACTTTCTATCCTTGGAGTTGCAGAGGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR GCA 90 bp GTCCCTGGAAGTGTGGGTTTAAGGCACCCGTCCTTCACACTTCTCCACAGGGACTGGCAGAATGATCGTTaGTGCTTCTTTCTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: VPGSVGLRHPSFTLLHRDWQNDR*CFFLLL
Trigger: GAGGAGGAGAAAGAAGCAGCAACGATCATTCTGCCA...GTCCCTGTGGAGAAGTGTGAAGGACGGGTGCCTTAAACCCACACTTCCAGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR-3UTR GCA 90 bp AATAGCAGGTCCCCTCGAAGAATAGCAGGTCCCCTTCTGGAATGCACTCTTGAGTGGCTGCACTTGCTCTaGTGCCAGTCACTGTGCAGA +
Preference number: 2 (lower is better)
Translates to: NSRSPRRIAGPLLECTLEWLHLL*CQSLCR
Trigger: TCTGCACAGTGACTGGCAGCAGAGCAAGTGCAGCCA...CTCAAGAGTGCATTCCAGAAGGGGACCTGCTATTCTTCGAGGGGACCTGCTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR-3UTR CCA 90 bp ATGGGCCCTCTCTCTGTCTGTCCCAGAAGGAATGGCCAATCAGGCCTCCTCTGCGGTTGCAAGATGGTCTaGAATTCTGCAGGTCTTCTT +
Preference number: 2 (lower is better)
Translates to: MGPLSVCPRRNGQSGLLCGCKMV*NSAGLL
Trigger: AAGAAGACCTGCAGAATTCCAGACCATCTTGCAACC...GCAGAGGAGGCCTGATTGGCCATTCCTTCTGGGACAGACAGAGAGAGGGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CCA 90 bp CGGAACCCTAACTGGCTACCCTTTAGGCAACATCAAGGAAAGTTGTGGAGCCTGGCACACGTCGCTCTCTaGTCACGGTTGCAAGATGGT +
Preference number: 2 (lower is better)
Translates to: RNPNWLPFRQHQGKLWSLAHVAL*SRLQDG
Trigger: ACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGC...CAGGCTCCACAACTTTCCTTGATGTTGCCTAAAGGGTAGCCAGTTAGGGTTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CAA 90 bp AGCCTGCACAGTCAGTCAAGGGCAAATCTCCGTCAAGTTGTCCATTaGACATGTGGCTTTGCACACTCTCACTGGGCTAGATGTCGGGTC +
Preference number: 2 (lower is better)
Translates to: SLHSQSRANLRQVVH*TCGFAHSHWARCRV
Trigger: GACCCGACATCTAGCCCAGTGAGAGTGTGCAAAGCCACATGTCAAATGGACAACTTGACGGAGATTTGCCCTTGACTGACTGTGCAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CAA 90 bp AATTTACTATGCTTTCTTCCCTTTGGCCACAAACCCTGGCTGCACTaGCTCTGCTGCCAGTCACTGTGCAGAAAGTCCAGTGTCCAGGGG +
Preference number: 2 (lower is better)
Translates to: NLLCFLPFGHKPWLH*LCCQSLCRKSSVQG
Trigger: CCCCTGGACACTGGACTTTCTGCACAGTGACTGGCAGCAGAGCAAGTGCAGCCAGGGTTTGTGGCCAAAGGGAAGAAAGCATAGTAAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR TCA 90 bp CGGAACCCTAACTGGCTACCCTTTAGGCAACATCAAGGAAAGTTGTGGAGCCTGGAAACGCAGGAGAGGTaGGGGTTAGGAACAACCAGA +
Preference number: 2 (lower is better)
Translates to: RNPNWLPFRQHQGKLWSLETQER*GLGTTR
Trigger: TCTGGTTGTTCCTAACCCTCACCTCTCCTGCGTTTC...CAGGCTCCACAACTTTCCTTGATGTTGCCTAAAGGGTAGCCAGTTAGGGTTCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR TCA 90 bp GATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGGGCTGCAGTCCAAGGCCTGGGCTGGAGGTGTGGCATaGAATGAGTGTAGGATTCTA +
Preference number: 2 (lower is better)
Translates to: DRKCPAKTFDWGLQSKAWAGGVA*NECRIL
Trigger: TAGAATCCTACACTCATTTCATGCCACACCTCCAGC...CCAGGCCTTGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGACACTTTCTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR TCA 90 bp GATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGGGCTGCAGTCCAAGGCCTGGTCAGTCCAAGAGCCCTaGTACAGGAATCTGTGCAAA +
Preference number: 2 (lower is better)
Translates to: DRKCPAKTFDWGLQSKAWSVQEP*YRNLCK
Trigger: TTTGCACAGATTCCTGTATCAGGGCTCTTGGACTGA...CCAGGCCTTGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGACACTTTCTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR GCA 90 bp GCCGGACTGAGCAGAGTACATGCCAAGAGGGCAGCTATTGCTGATCCCTCCTTTCTCTCTGGTCACGGTTaGAAGATGGTCTGGAATTCT +
Preference number: 2 (lower is better)
Translates to: AGLSRVHAKRAAIADPSFLSGHG*KMVWNS
Trigger: AGAATTCCAGACCATCTTGCAACCGTGACCAGAGAG...AAAGGAGGGATCAGCAATAGCTGCCCTCTTGGCATGTACTCTGCTCAGTCCGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR GCA 90 bp CACAGGGACATGGGGCAGCAGGGCCAGAGTGTTGACCATCAGCAAACAGGGTCCTTCTGGATACCATCCTaGTCACCATCGATTATATCT +
Preference number: 2 (lower is better)
Translates to: HRDMGQQGQSVDHQQTGSFWIPS*SPSIIS
Trigger: AGATATAATCGATGGTGAGCAGGATGGTATCCAGAA...GGACCCTGTTTGCTGATGGTCAACACTCTGGCCCTGCTGCCCCATGTCCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR-3UTR GCA 90 bp AATAGCAGGTCCCCTCGAAGAATAGCAGGTCCCCTTCTGGAATGCACTCTTGAGTGCTGCCAGTCACTGTaGAGAAAGTCCAGTGTCCAG +
Preference number: 2 (lower is better)
Translates to: NSRSPRRIAGPLLECTLECCQSL*RKSSVQ
Trigger: CTGGACACTGGACTTTCTGCACAGTGACTGGCAGCA...CTCAAGAGTGCATTCCAGAAGGGGACCTGCTATTCTTCGAGGGGACCTGCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR-3UTR CCA 90 bp GACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCACCTGAGTTTGTACCTAGAAAGAAGGGTGTGTTCTaGGTGGCCATCTGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: DSRQAVGLFIRAPEFVPRKKGVF*VAIWPQ
Trigger: CTGGGGCCAGATGGCCACCCAGAACACACCCTTCTT...TCTAGGTACAAACTCAGGTGCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CCA 90 bp GCCTCCTCTGCAACTCCAAGGATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGGTCCTGGTCAGCAAATaGGGCAGGTATGGCAGCAAT +
Preference number: 2 (lower is better)
Translates to: ASSATPRIESVLQRPLTGVLVSK*GRYGSN
Trigger: ATTGCTGCCATACCTGCCCCATTTGCTGACCAGGAC...CCCAGTCAAAGGTCTTTGCAGGACACTTTCTATCCTTGGAGTTGCAGAGGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CCA 90 bp CATTTCTGGATACCATCCTGCTCACCATCGATTATATCTAGCAACTGGCCTCAGTTTCCCAGGTGGCCCTaGTTGGGCACACGTCGCTCT +
Preference number: 2 (lower is better)
Translates to: HFWIPSCSPSIISSNWPQFPRWP*LGTRRS
Trigger: AGAGCGACGTGTGCCCAACCAGGGCCACCTGGGAAA...CTGAGGCCAGTTGCTAGATATAATCGATGGTGAGCAGGATGGTATCCAGAAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CCA 90 bp ATGGGCCCTCTCTCTGTCTGTCCCAGAAGGAATGGCCAATCAGGCCTCCTCTGCAGTCACTCTTTACAATaGCAGAATGATCGTTGCTGC +
Preference number: 2 (lower is better)
Translates to: MGPLSVCPRRNGQSGLLCSHSLQ*QNDRCC
Trigger: GCAGCAACGATCATTCTGCCATTGTAAAGAGTGACT...GCAGAGGAGGCCTGATTGGCCATTCCTTCTGGGACAGACAGAGAGAGGGCCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR TCA 90 bp ACTGCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGCAGGTTCTGCAGGTCTaGAACTCCCTGAAGTCCTGG +
Preference number: 2 (lower is better)
Translates to: TAEAVLSGLKASSGSLYKQVLQV*NSLKSW
Trigger: CCAGGACTTCAGGGAGTTTCAGACCTGCAGAACCTG...CTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR TCA 90 bp ACTGCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGCTTTACTGTGTCACTaGAGCACAGCAGCAGGCCAG +
Preference number: 2 (lower is better)
Translates to: TAEAVLSGLKASSGSLYKALLCH*STAAGQ
Trigger: CTGGCCTGCTGCTGTGCTTCAGTGACACAGTAAAGC...CTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CCA 90 bp CACCCCTCTTTCAACCCAAGAAAGCTCCCAAAGCCCACAGTTCCTCTTACAGCTGTCACGGTTGCAAGATaGTCTGGAATTCTGCAGGTC +
Preference number: 2 (lower is better)
Translates to: HPSFNPRKLPKPTVPLTAVTVAR*SGILQV
Trigger: GACCTGCAGAATTCCAGACCATCTTGCAACCGTGAC...AGCTGTAAGAGGAACTGTGGGCTTTGGGAGCTTTCTTGGGTTGAAAGAGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR-3UTR CCA 90 bp GCCTCCTCTGCAACTCCAAGGATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGGTCACGGTTGCAAGATaGTCTGGAATTCTGCAGGTC +
Preference number: 2 (lower is better)
Translates to: ASSATPRIESVLQRPLTGVTVAR*SGILQV
Trigger: GACCTGCAGAATTCCAGACCATCTTGCAACCGTGAC...CCCAGTCAAAGGTCTTTGCAGGACACTTTCTATCCTTGGAGTTGCAGAGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CCA 90 bp GGCAGGGTGATCTCAGCTTTGACAAGACATAGCAAGAACACACTAGAAAGGAAATTTCCCAGGTGGCCCTaGTTGGGCACACGTCGCTCT +
Preference number: 2 (lower is better)
Translates to: GRVISALTRHSKNTLERKFPRWP*LGTRRS
Trigger: AGAGCGACGTGTGCCCAACCAGGGCCACCTGGGAAA...TTTCCTTTCTAGTGTGTTCTTGCTATGTCTTGTCAAAGCTGAGATCACCCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609883.1
3UTR-3UTR CCA 90 bp CGGAACCCTAACTGGCTACCCTTTAGGCAACATCAAGGAAAGTTGTGGAGCCTGCCTCTGCTGGAGGTGTaGCATGAAATGAGTGTAGGA +
Preference number: 2 (lower is better)
Translates to: RNPNWLPFRQHQGKLWSLPLLEV*HEMSVG
Trigger: TCCTACACTCATTTCATGCCACACCTCCAGCAGAGG...CAGGCTCCACAACTTTCCTTGATGTTGCCTAAAGGGTAGCCAGTTAGGGTTCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CCA 90 bp CACCCCTCTTTCAACCCAAGAAAGCTCCCAAAGCCCACAGTTCCTCTTACAGCTCTCAAGTGCTGTAAGTaGAACCAGCCTGCACAGTCA +
Preference number: 2 (lower is better)
Translates to: HPSFNPRKLPKPTVPLTALKCCK*NQPAQS
Trigger: TGACTGTGCAGGCTGGTTCCACTTACAGCACTTGAG...AGCTGTAAGAGGAACTGTGGGCTTTGGGAGCTTTCTTGGGTTGAAAGAGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR-3UTR CCA 90 bp CACCCCTCTTTCAACCCAAGAAAGCTCCCAAAGCCCACAGTTCCTCTTACAGCTAGAAGCAGTGCTTTCTaGACTCAAGGCAAGCAGTGG +
Preference number: 2 (lower is better)
Translates to: HPSFNPRKLPKPTVPLTARSSAF*TQGKQW
Trigger: CCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCT...AGCTGTAAGAGGAACTGTGGGCTTTGGGAGCTTTCTTGGGTTGAAAGAGGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR-3UTR TCA 90 bp GATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGGGCTGCAGTCCAAGGCCTGGGGAAATACAAGAGGGTaGCCAGTTCATTTATGGGAA +
Preference number: 2 (lower is better)
Translates to: DRKCPAKTFDWGLQSKAWGNTRG*PVHLWE
Trigger: TTCCCATAAATGAACTGGTCACCCTCTTGTATTTCC...CCAGGCCTTGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGACACTTTCTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR TCA 90 bp GGCAAATCTCCGTCAAGTTGTCCATTTGACATGTGGCTTTGCACACTCTCACTGGAAACGCAGGAGAGGTaGGGGTTAGGAACAACCAGA +
Preference number: 2 (lower is better)
Translates to: GKSPSSCPFDMWLCTLSLETQER*GLGTTR
Trigger: TCTGGTTGTTCCTAACCCTCACCTCTCCTGCGTTTC...CAGTGAGAGTGTGCAAAGCCACATGTCAAATGGACAACTTGACGGAGATTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CCA 90 bp CACCCCTCTTTCAACCCAAGAAAGCTCCCAAAGCCCACAGTTCCTCTTACAGCTCATTGGGTGAAGTCCTaGTGGGTCAGTCAGAGAATA +
Preference number: 2 (lower is better)
Translates to: HPSFNPRKLPKPTVPLTAHWVKS*WVSQRI
Trigger: TATTCTCTGACTGACCCACCAGGACTTCACCCAATG...AGCTGTAAGAGGAACTGTGGGCTTTGGGAGCTTTCTTGGGTTGAAAGAGGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR-3UTR CCA 90 bp GTGCTGAAGGGTCCCTGGAAGTGTGGGTTTAAGGCACCCGTCCTTCACACTTCTAGCAGTGGATTTGGCTaGCATTTTATGGCCAAAACT +
Preference number: 2 (lower is better)
Translates to: VLKGPWKCGFKAPVLHTSSSGFG*HFMAKT
Trigger: AGTTTTGGCCATAAAATGCCAGCCAAATCCACTGCT...AGAAGTGTGAAGGACGGGTGCCTTAAACCCACACTTCCAGGGACCCTTCAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR-3UTR TCA 90 bp ACTGCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGAGGTCTGAAACTCCCTaGAGTCCTGGTCAGCAAATG +
Preference number: 2 (lower is better)
Translates to: TAEAVLSGLKASSGSLYKRSETP*SPGQQM
Trigger: CATTTGCTGACCAGGACTTCAGGGAGTTTCAGACCT...CTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR TCA 90 bp AGAATGATCGTTGCTGCTTCTTTCTCCTCCTCCTCTTCTTCCTCCTTCTCCTCTAGGTCTGAAACTCCCTaGAGTCCTGGTCAGCAAATG +
Preference number: 2 (lower is better)
Translates to: RMIVAASFSSSSSSSFSSRSETP*SPGQQM
Trigger: CATTTGCTGACCAGGACTTCAGGGAGTTTCAGACCT...AGAGGAGAAGGAGGAAGAAGAGGAGGAGGAGAAAGAAGCAGCAACGATCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR TCA 90 bp CGGAACCCTAACTGGCTACCCTTTAGGCAACATCAAGGAAAGTTGTGGAGCCTGGTCAAGTTGTCCATTTaGCATGTGGCTTTGCACACT +
Preference number: 2 (lower is better)
Translates to: RNPNWLPFRQHQGKLWSLVKLSI*HVALHT
Trigger: AGTGTGCAAAGCCACATGTCAAATGGACAACTTGAC...CAGGCTCCACAACTTTCCTTGATGTTGCCTAAAGGGTAGCCAGTTAGGGTTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR GCA 90 bp GACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCACCTGAGTTTGTACCTAGAACTGAGCAGAGTACATaGCAAGAGGGCAGCTATTGC +
Preference number: 2 (lower is better)
Translates to: DSRQAVGLFIRAPEFVPRTEQST*QEGSYC
Trigger: GCAATAGCTGCCCTCTTGGCATGTACTCTGCTCAGT...TCTAGGTACAAACTCAGGTGCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CCA 90 bp TCAGACTCCCATGAGGAACAGAGGTTGAATTTACTATGCTTTCTTCCCTTTGGCGCACACGTCGCTCTCTaGTCACGGTTGCAAGATGGT +
Preference number: 2 (lower is better)
Translates to: SDSHEEQRLNLLCFLPFGAHVAL*SRLQDG
Trigger: ACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGC...GCCAAAGGGAAGAAAGCATAGTAAATTCAACCTCTGTTCCTCATGGGAGTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CCA 90 bp ACTGCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGCTCAAGTGCTGTAAGTaGAACCAGCCTGCACAGTCA +
Preference number: 2 (lower is better)
Translates to: TAEAVLSGLKASSGSLYKLKCCK*NQPAQS
Trigger: TGACTGTGCAGGCTGGTTCCACTTACAGCACTTGAG...CTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR TCA 90 bp GCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCGGAAATACAAGAGGGTaGCCAGTTCATTTATGGGAA +
Preference number: 2 (lower is better)
Translates to: AEAVLSGLKASSGSLYKGGNTRG*PVHLWE
Trigger: TTCCCATAAATGAACTGGTCACCCTCTTGTATTTCC...GCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR GCA 90 bp GCCTCCTCTGCAACTCCAAGGATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGAAAGGTAAACTCAAGTaGTGTAAGTGGAACCAGCCT +
Preference number: 2 (lower is better)
Translates to: ASSATPRIESVLQRPLTGKGKLK*CKWNQP
Trigger: AGGCTGGTTCCACTTACAGCACTTGAGTTTACCTTT...CCCAGTCAAAGGTCTTTGCAGGACACTTTCTATCCTTGGAGTTGCAGAGGAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR GCA 90 bp ACTGCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGCAGAATGATCGTTGCTaGTTCTTTCTCCTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: TAEAVLSGLKASSGSLYKQNDRC*FFLLLL
Trigger: GAGGAGGAGGAGAAAGAAGCAGCAACGATCATTCTG...CTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR GCA 90 bp GACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCACCTGAGTTTGTACCTAGACAGAATGATCGTTGCTaGTTCTTTCTCCTCCTCCTC +
Preference number: 2 (lower is better)
Translates to: DSRQAVGLFIRAPEFVPRQNDRC*FFLLLL
Trigger: GAGGAGGAGGAGAAAGAAGCAGCAACGATCATTCTG...TCTAGGTACAAACTCAGGTGCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CCA 90 bp ACTGCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGCATTGGGTGAAGTCCTaGTGGGTCAGTCAGAGAATA +
Preference number: 2 (lower is better)
Translates to: TAEAVLSGLKASSGSLYKHWVKS*WVSQRI
Trigger: TATTCTCTGACTGACCCACCAGGACTTCACCCAATG...CTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CCA 90 bp CACCCCTCTTTCAACCCAAGAAAGCTCCCAAAGCCCACAGTTCCTCTTACAGCTAGTCACTCTTTACAATaGCAGAATGATCGTTGCTGC +
Preference number: 2 (lower is better)
Translates to: HPSFNPRKLPKPTVPLTASHSLQ*QNDRCC
Trigger: GCAGCAACGATCATTCTGCCATTGTAAAGAGTGACT...AGCTGTAAGAGGAACTGTGGGCTTTGGGAGCTTTCTTGGGTTGAAAGAGGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR-3UTR CCA 90 bp GGCAGGGTGATCTCAGCTTTGACAAGACATAGCAAGAACACACTAGAAAGGAAAAACCAGTCAGAGGACTaGGTTTCTCTGCGACTCCTC +
Preference number: 2 (lower is better)
Translates to: GRVISALTRHSKNTLERKNQSED*VSLRLL
Trigger: GAGGAGTCGCAGAGAAACCCAGTCCTCTGACTGGTT...TTTCCTTTCTAGTGTGTTCTTGCTATGTCTTGTCAAAGCTGAGATCACCCTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609883.1
3UTR-3UTR GCA 90 bp GACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCACCTGAGTTTGTACCTAGAGATGGTCTGGAATTCTaGAGGTCTTCTTCAGGTTCT +
Preference number: 2 (lower is better)
Translates to: DSRQAVGLFIRAPEFVPRDGLEF*RSSSGS
Trigger: AGAACCTGAAGAAGACCTGCAGAATTCCAGACCATC...TCTAGGTACAAACTCAGGTGCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CCA 90 bp GAAAGCTTTAGCATACAGAGCAGCTTCTTATCTTCACAACACAGTAATGCAACAAAGAAGGGTGTGTTCTaGGTGGCCATCTGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: ESFSIQSSFLSSQHSNATKKGVF*VAIWPQ
Trigger: CTGGGGCCAGATGGCCACCCAGAACACACCCTTCTT...TGTTGCATTACTGTGTTGTGAAGATAAGAAGCTGCTCTGTATGCTAAAGCTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR-3UTR CCA 90 bp GACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCACCTGAGTTTGTACCTAGATGTCCATTTGACATGTaGCTTTGCACACTCTCACTG +
Preference number: 2 (lower is better)
Translates to: DSRQAVGLFIRAPEFVPRCPFDM*LCTLSL
Trigger: CAGTGAGAGTGTGCAAAGCCACATGTCAAATGGACA...TCTAGGTACAAACTCAGGTGCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR TCA 90 bp TCAGACTCCCATGAGGAACAGAGGTTGAATTTACTATGCTTTCTTCCCTTTGGCTCAGTCCAAGAGCCCTaGTACAGGAATCTGTGCAAA +
Preference number: 2 (lower is better)
Translates to: SDSHEEQRLNLLCFLPFGSVQEP*YRNLCK
Trigger: TTTGCACAGATTCCTGTATCAGGGCTCTTGGACTGA...GCCAAAGGGAAGAAAGCATAGTAAATTCAACCTCTGTTCCTCATGGGAGTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CCA 90 bp TCAGACTCCCATGAGGAACAGAGGTTGAATTTACTATGCTTTCTTCCCTTTGGCAGCAGTGGATTTGGCTaGCATTTTATGGCCAAAACT +
Preference number: 2 (lower is better)
Translates to: SDSHEEQRLNLLCFLPFGSSGFG*HFMAKT
Trigger: AGTTTTGGCCATAAAATGCCAGCCAAATCCACTGCT...GCCAAAGGGAAGAAAGCATAGTAAATTCAACCTCTGTTCCTCATGGGAGTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR TCA 90 bp GAAAGCTTTAGCATACAGAGCAGCTTCTTATCTTCACAACACAGTAATGCAACATCGGTCAGACTCCCATaGGGAACAGAGGTTGAATTT +
Preference number: 2 (lower is better)
Translates to: ESFSIQSSFLSSQHSNATSVRLP*GTEVEF
Trigger: AAATTCAACCTCTGTTCCTCATGGGAGTCTGACCGA...TGTTGCATTACTGTGTTGTGAAGATAAGAAGCTGCTCTGTATGCTAAAGCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR-3UTR CAA 90 bp TTTATGGGAACAGGCCCAGAAACTTGCTCTCCAGCTCGTGGCCGGACTGAGCAGCCCAGGTGGCCCTGGTaGGGCACACGTCGCTCTCTG +
Preference number: 3 (lower is better)
Translates to: FMGTGPETCSPARGRTEQPRWPW*GTRRSL
Trigger: CAGAGAGCGACGTGTGCCCAACCAGGGCCACCTGGG...CTGCTCAGTCCGGCCACGAGCTGGAGAGCAAGTTTCTGGGCCTGTTCCCATAAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CAA 90 bp ATGGGCCCTCTCTCTGTCTGTCCCAGAAGGAATGGCCAATCAGGCCTCCTCTGCAACAGGCCCAGAAACTaGCTCTCCAGCTCGTGGCCG +
Preference number: 3 (lower is better)
Translates to: MGPLSVCPRRNGQSGLLCNRPRN*LSSSWP
Trigger: CGGCCACGAGCTGGAGAGCAAGTTTCTGGGCCTGTT...GCAGAGGAGGCCTGATTGGCCATTCCTTCTGGGACAGACAGAGAGAGGGCCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CCA 72 bp TTCCCAGGTGGCCCTGGTTGGGCACACGTCGCTCTCTaGTCACGGTTGCAAGATGGTCTGGAATTCTGCAGG +
Preference number: 3 (lower is better)
Translates to: FPGGPGWAHVAL*SRLQDGLEFCR
Trigger: CCTGCAGAATTCCAGACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGCCCAACCAGGGCCACCTGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CCA 72 bp TCAAAGGGAAGCCCAAGCCCCTCCTGCCCCAGAGGGTaGAAACCAGCTCACTGCTCATCTGCTCTATCCCTG +
Preference number: 3 (lower is better)
Translates to: SKGSPSPSCPRG*KPAHCSSALSL
Trigger: CAGGGATAGAGCAGATGAGCAGTGAGCTGGTTTCCACCCTCTGGGGCAGGAGGGGCTTGGGCTTCCCTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR-3UTR CAA 90 bp AATAGCAGGTCCCCTCGAAGAATAGCAGGTCCCCTTCTGGAATGCACTCTTGAGCCCAGGTGGCCCTGGTaGGGCACACGTCGCTCTCTG +
Preference number: 3 (lower is better)
Translates to: NSRSPRRIAGPLLECTLEPRWPW*GTRRSL
Trigger: CAGAGAGCGACGTGTGCCCAACCAGGGCCACCTGGG...CTCAAGAGTGCATTCCAGAAGGGGACCTGCTATTCTTCGAGGGGACCTGCTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR-3UTR CAA 90 bp TTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGACAGATCAGTGAGGCATaGGGTGAAGTCCTGGTGGGT +
Preference number: 3 (lower is better)
Translates to: LHTLTGLDVGSSSRPSAGQISEA*GEVLVG
Trigger: ACCCACCAGGACTTCACCCAATGCCTCACTGATCTG...TCCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR TCA 72 bp AGGCCCAGAAACTTGCTCTCCAGCTCGTGGCCGGACTaGGCAGAGTACATGCCAAGAGGGCAGCTATTGCTG +
Preference number: 3 (lower is better)
Translates to: RPRNLLSSSWPD*AEYMPRGQLLL
Trigger: CAGCAATAGCTGCCCTCTTGGCATGTACTCTGCTCAGTCCGGCCACGAGCTGGAGAGCAAGTTTCTGGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR TCA 72 bp TGCTCTATCCCTGGCTGTAGCTCTGAGGGTTCAGGGTaGGAAGCACCATGGGAACAGGCAGGACCTGTGCTG +
Preference number: 3 (lower is better)
Translates to: CSIPGCSSEGSG*EAPWEQAGPVL
Trigger: CAGCACAGGTCCTGCCTGTTCCCATGGTGCTTCTCACCCTGAACCCTCAGAGCTACAGCCAGGGATAGAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR GCA 72 bp TACCCTTTAGGCAACATCAAGGAAAGTTGTGGAGCCTaGAATGTTGGGCGCTGTCCACCGGGGGTGCCCAGG +
Preference number: 3 (lower is better)
Translates to: YPLGNIKESCGA*NVGRCPPGVPR
Trigger: CCTGGGCACCCCCGGTGGACAGCGCCCAACATTGCAGGCTCCACAACTTTCCTTGATGTTGCCTAAAGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR GCA 72 bp AAACCCTGGCTGCACTTGCTCTGCTGCCAGTCACTGTaGAGAAAGTCCAGTGTCCAGGGGCAGTTCAGGCCA +
Preference number: 3 (lower is better)
Translates to: KPWLHLLCCQSL*RKSSVQGQFRP
Trigger: TGGCCTGAACTGCCCCTGGACACTGGACTTTCTGCACAGTGACTGGCAGCAGAGCAAGTGCAGCCAGGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CCA 72 bp CTATTGCTGATCCCTCCTTTCCCAGGTGGCCCTGGTTaGGCACACGTCGCTCTCTGGTCACGGTTGCAAGAT +
Preference number: 3 (lower is better)
Translates to: LLLIPPFPGGPG*AHVALWSRLQD
Trigger: ATCTTGCAACCGTGACCAGAGAGCGACGTGTGCCCAACCAGGGCCACCTGGGAAAGGAGGGATCAGCAATAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR GCA 72 bp GCCCTGGTTGGGCACACGTCGCTCTCTGGTCACGGTTaGAAGATGGTCTGGAATTCTGCAGGTCTTCTTCAG +
Preference number: 3 (lower is better)
Translates to: ALVGHTSLSGHG*KMVWNSAGLLQ
Trigger: CTGAAGAAGACCTGCAGAATTCCAGACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGCCCAACCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR GCA 72 bp CTTCCCTTTGGCCACAAACCCTGGCTGCACTTGCTCTaGTGCCAGTCACTGTGCAGAAAGTCCAGTGTCCAG +
Preference number: 3 (lower is better)
Translates to: LPFGHKPWLHLL*CQSLCRKSSVQ
Trigger: CTGGACACTGGACTTTCTGCACAGTGACTGGCAGCAGAGCAAGTGCAGCCAGGGTTTGTGGCCAAAGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CCA 72 bp GCAAAGACCTTTGACTGGGGGCTGCAGTCCAAGGCCTaGCAAGGGGAGAAGACCACCATCCCTAAGGAAAGA +
Preference number: 3 (lower is better)
Translates to: AKTFDWGLQSKA*QGEKTTIPKER
Trigger: TCTTTCCTTAGGGATGGTGGTCTTCTCCCCTTGCCAGGCCTTGGACTGCAGCCCCCAGTCAAAGGTCTTTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CAA 90 bp GGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAAAACAGGCCCAGAAACTaGCTCTCCAGCTCGTGGCCG +
Preference number: 3 (lower is better)
Translates to: GQISEALGEVLVGQSENKNRPRN*LSSSWP
Trigger: CGGCCACGAGCTGGAGAGCAAGTTTCTGGGCCTGTT...TTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR TCA 72 bp TCTCTTGCCTCCAGGCCCAAGATCCTAAGGTCCGCCTaGGATTATCGGTCAGACTCCCATGAGGAACAGAGG +
Preference number: 3 (lower is better)
Translates to: SLASRPKILRSA*DYRSDSHEEQR
Trigger: CCTCTGTTCCTCATGGGAGTCTGACCGATAATCTCAGGCGGACCTTAGGATCTTGGGCCTGGAGGCAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR GCA 72 bp ATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGGGCTaGAGTCCAAGGCCTGGCAAGGGGAGAAGACCACCA +
Preference number: 3 (lower is better)
Translates to: IESVLQRPLTGG*SPRPGKGRRPP
Trigger: TGGTGGTCTTCTCCCCTTGCCAGGCCTTGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGACACTTTCTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CCA 72 bp GTTGTCCATTTGACATGTGGCTTTGCACACTCTCACTaGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGC +
Preference number: 3 (lower is better)
Translates to: VVHLTCGFAHSH*ARCRVLFQALC
Trigger: GCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAAAGCCACATGTCAAATGGACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR TCA 72 bp CAGGTCTTCTTCAGGTTCTGCAGGTCTGAAACTCCCTaGAGTCCTGGTCAGCAAATGGGGCAGGTATGGCAG +
Preference number: 3 (lower is better)
Translates to: QVFFRFCRSETP*SPGQQMGQVWQ
Trigger: CTGCCATACCTGCCCCATTTGCTGACCAGGACTTCAGGGAGTTTCAGACCTGCAGAACCTGAAGAAGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CCA 72 bp CACACGTCGCTCTCTGGTCACGGTTGCAAGATGGTCTaGAATTCTGCAGGTCTTCTTCAGGTTCTGCAGGTC +
Preference number: 3 (lower is better)
Translates to: HTSLSGHGCKMV*NSAGLLQVLQV
Trigger: GACCTGCAGAACCTGAAGAAGACCTGCAGAATTCCAGACCATCTTGCAACCGTGACCAGAGAGCGACGTGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CAA 90 bp GCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCCAGATCAGTGAGGCATaGGGTGAAGTCCTGGTGGGT +
Preference number: 3 (lower is better)
Translates to: AEAVLSGLKASSGSLYKGQISEA*GEVLVG
Trigger: ACCCACCAGGACTTCACCCAATGCCTCACTGATCTG...GCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CAA 90 bp GGCAAATCTCCGTCAAGTTGTCCATTTGACATGTGGCTTTGCACACTCTCACTGCCAAGAGGGCAGCTATaGCTGATCCCTCCTTTCCCA +
Preference number: 3 (lower is better)
Translates to: GKSPSSCPFDMWLCTLSLPRGQL*LIPPFP
Trigger: TGGGAAAGGAGGGATCAGCAATAGCTGCCCTCTTGG...CAGTGAGAGTGTGCAAAGCCACATGTCAAATGGACAACTTGACGGAGATTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CAA 90 bp GCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCAAGGGTTCCTTGAAATaGAAGGGAGCTCAGAGCAGG +
Preference number: 3 (lower is better)
Translates to: AEAVLSGLKASSGSLYKGKGSLK*KGAQSR
Trigger: CCTGCTCTGAGCTCCCTTCAATTTCAAGGAACCCTT...GCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR TCA 72 bp TGGAATTCTGCAGGTCTTCTTCAGGTTCTGCAGGTCTaGAACTCCCTGAAGTCCTGGTCAGCAAATGGGGCA +
Preference number: 3 (lower is better)
Translates to: WNSAGLLQVLQV*NSLKSWSANGA
Trigger: TGCCCCATTTGCTGACCAGGACTTCAGGGAGTTTCAGACCTGCAGAACCTGAAGAAGACCTGCAGAATTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR TCA 72 bp GGGCTCCAGATGTGTGGCAAGTCAGTCCAAGAGCCCTaGTACAGGAATCTGTGCAAAGGTAAACTCAAGTGC +
Preference number: 3 (lower is better)
Translates to: GLQMCGKSVQEP*YRNLCKGKLKC
Trigger: GCACTTGAGTTTACCTTTGCACAGATTCCTGTATCAGGGCTCTTGGACTGACTTGCCACACATCTGGAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR GCA 72 bp GCTCTCTGGTCACGGTTGCAAGATGGTCTGGAATTCTaGAGGTCTTCTTCAGGTTCTGCAGGTCTGAAACTC +
Preference number: 3 (lower is better)
Translates to: ALWSRLQDGLEF*RSSSGSAGLKL
Trigger: GAGTTTCAGACCTGCAGAACCTGAAGAAGACCTGCAGAATTCCAGACCATCTTGCAACCGTGACCAGAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CAA 90 bp GACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCACCTGAGTTTGTACCTAGAGCTCTCTGGTCACGGTaGCAAGATGGTCTGGAATTC +
Preference number: 3 (lower is better)
Translates to: DSRQAVGLFIRAPEFVPRALWSR*QDGLEF
Trigger: GAATTCCAGACCATCTTGCAACCGTGACCAGAGAGC...TCTAGGTACAAACTCAGGTGCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CAA 90 bp GGCAAATCTCCGTCAAGTTGTCCATTTGACATGTGGCTTTGCACACTCTCACTGGCTCTCTGGTCACGGTaGCAAGATGGTCTGGAATTC +
Preference number: 3 (lower is better)
Translates to: GKSPSSCPFDMWLCTLSLALWSR*QDGLEF
Trigger: GAATTCCAGACCATCTTGCAACCGTGACCAGAGAGC...CAGTGAGAGTGTGCAAAGCCACATGTCAAATGGACAACTTGACGGAGATTTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CCA 72 bp AATTTACTATGCTTTCTTCCCTTTGGCCACAAACCCTaGCTGCACTTGCTCTGCTGCCAGTCACTGTGCAGA +
Preference number: 3 (lower is better)
Translates to: NLLCFLPFGHKP*LHLLCCQSLCR
Trigger: TCTGCACAGTGACTGGCAGCAGAGCAAGTGCAGCCAGGGTTTGTGGCCAAAGGGAAGAAAGCATAGTAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CAA 90 bp GACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCACCTGAGTTTGTACCTAGACGTCAAGTTGTCCATTaGACATGTGGCTTTGCACAC +
Preference number: 3 (lower is better)
Translates to: DSRQAVGLFIRAPEFVPRRQVVH*TCGFAH
Trigger: GTGTGCAAAGCCACATGTCAAATGGACAACTTGACG...TCTAGGTACAAACTCAGGTGCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR-3UTR CAA 90 bp AGAATGATCGTTGCTGCTTCTTTCTCCTCCTCCTCTTCTTCCTCCTTCTCCTCTCGTCAAGTTGTCCATTaGACATGTGGCTTTGCACAC +
Preference number: 3 (lower is better)
Translates to: RMIVAASFSSSSSSSFSSRQVVH*TCGFAH
Trigger: GTGTGCAAAGCCACATGTCAAATGGACAACTTGACG...AGAGGAGAAGGAGGAAGAAGAGGAGGAGGAGAAAGAAGCAGCAACGATCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR TCA 72 bp CCTAAGGTCCGCCTGAGATTATCGGTCAGACTCCCATaGGGAACAGAGGTTGAATTTACTATGCTTTCTTCC +
Preference number: 3 (lower is better)
Translates to: PKVRLRLSVRLP*GTEVEFTMLSS
Trigger: GGAAGAAAGCATAGTAAATTCAACCTCTGTTCCTCATGGGAGTCTGACCGATAATCTCAGGCGGACCTTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CCA 72 bp AGGAATCTGTGCAAAGGTAAACTCAAGTGCTGTAAGTaGAACCAGCCTGCACAGTCAGTCAAGGGCAAATCT +
Preference number: 3 (lower is better)
Translates to: RNLCKGKLKCCK*NQPAQSVKGKS
Trigger: AGATTTGCCCTTGACTGACTGTGCAGGCTGGTTCCACTTACAGCACTTGAGTTTACCTTTGCACAGATTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR TCA 72 bp TCGAAGAATAGCAGGTCCCCTTCTGGAATGCACTCTTaGGGAAATCAGATAAAATCAGCTCCCACTGATGAA +
Preference number: 3 (lower is better)
Translates to: SKNSRSPSGMHS*GNQIKSAPTDE
Trigger: TTCATCAGTGGGAGCTGATTTTATCTGATTTCCTCAAGAGTGCATTCCAGAAGGGGACCTGCTATTCTTCGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR TCA 90 bp TTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGACGGGGGCGGTTCCTTTaGCGCGGGCGGAGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: LHTLTGLDVGSSSRPSAGRGRFL*RGRRQR
Trigger: GCGCTGCCTCCGCCCGCGTCAAAGGAACCGCCCCCG...TCCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp CACAGGGACATGGGGCAGCAGGGCCAGAGTGTTGACCATCAGCAAACAGGGTCCCGGAGGAGGCCGAAATaGGGCGGCGGGGCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: HRDMGQQGQSVDHQQTGSRRRPK*GGGARE
Trigger: CTCCCGAGCCCCGCCGCCGCATTTCGGCCTCCTCCG...GGACCCTGTTTGCTGATGGTCAACACTCTGGCCCTGCTGCCCCATGTCCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR GCA 90 bp TTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGAAGGCCGCTCCAGCGGTaGCAGAGGGGGTTGCGGGGG +
Preference number: 4 (lower is better)
Translates to: LHTLTGLDVGSSSRPSAGRPLQR*QRGLRG
Trigger: CCCCCGCAACCCCCTCTGGCACCGCTGGAGCGGCCT...TCCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp TTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGACGGGCCCGTCGGGGGTaGTGCGATCCTGGATCACGT +
Preference number: 4 (lower is better)
Translates to: LHTLTGLDVGSSSRPSAGRARRG*CDPGSR
Trigger: ACGTGATCCAGGATCGCAGCACCCCCGACGGGCCCG...TCCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp CGGAACCCTAACTGGCTACCCTTTAGGCAACATCAAGGAAAGTTGTGGAGCCTGCGGGGGCGGTTCCTTTaGCGCGGGCGGAGGCAGCGC +
Preference number: 4 (lower is better)
Translates to: RNPNWLPFRQHQGKLWSLRGRFL*RGRRQR
Trigger: GCGCTGCCTCCGCCCGCGTCAAAGGAACCGCCCCCG...CAGGCTCCACAACTTTCCTTGATGTTGCCTAAAGGGTAGCCAGTTAGGGTTCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp ATGGGCCCTCTCTCTGTCTGTCCCAGAAGGAATGGCCAATCAGGCCTCCTCTGCGCGCCCCCGGGGAAATaGACCTCATGGTCGGCTATG +
Preference number: 4 (lower is better)
Translates to: MGPLSVCPRRNGQSGLLCAPPGK*TSWSAM
Trigger: CATAGCCGACCATGAGGTTCATTTCCCCGGGGGCGC...GCAGAGGAGGCCTGATTGGCCATTCCTTCTGGGACAGACAGAGAGAGGGCCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp GGGCACACGTCGCTCTCTGGTCACGGTTGCAAGATGGTCTGGAATTCTGCAGGTCCCCCTGTCTCGGAGTaGGGCGGAAAAGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: GHTSLSGHGCKMVWNSAGPPVSE*GGKAQG
Trigger: CCCCTGTGCTTTTCCGCCTCACTCCGAGACAGGGGG...ACCTGCAGAATTCCAGACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp ATGGGCCCTCTCTCTGTCTGTCCCAGAAGGAATGGCCAATCAGGCCTCCTCTGCTGGGGAAAGGGGAACTaGAACTACGGGCGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: MGPLSVCPRRNGQSGLLCWGKGN*NYGRPE
Trigger: CTCCGGCCGCCCGTAGTTCCAGTTCCCCTTTCCCCA...GCAGAGGAGGCCTGATTGGCCATTCCTTCTGGGACAGACAGAGAGAGGGCCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TCTTGCTCATTGGGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGCAAGCCCAGGGGCCCTaGGGCTCCGTGGTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: SCSLGQISEALGEVLVGQQAQGP*GSVVGK
Trigger: TTTCCCCACCACGGAGCCCCAGGGCCCCTGGGCTTG...CTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCCCAATGAGCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp GGGCACACGTCGCTCTCTGGTCACGGTTGCAAGATGGTCTGGAATTCTGCAGGTCTCTGGTCCTTGGAGTaGAGCCTGTGCCTGCGTGCC +
Preference number: 4 (lower is better)
Translates to: GHTSLSGHGCKMVWNSAGLWSLE*SLCLRA
Trigger: GGCACGCAGGCACAGGCTTCACTCCAAGGACCAGAG...ACCTGCAGAATTCCAGACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp CACAGGGACATGGGGCAGCAGGGCCAGAGTGTTGACCATCAGCAAACAGGGTCCGTCTGGGATGACGCGTaGACAAAGGTCGGCTCCATC +
Preference number: 4 (lower is better)
Translates to: HRDMGQQGQSVDHQQTGSVWDDA*TKVGSI
Trigger: GATGGAGCCGACCTTTGTTCACGCGTCATCCCAGAC...GGACCCTGTTTGCTGATGGTCAACACTCTGGCCCTGCTGCCCCATGTCCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR GCA 90 bp TTTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGCCTTTGACTGGGGGCTaGAGTCCAAGGCCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: FAHSHWARCRVLFQALCWPLTGG*SPRPGK
Trigger: CTTGCCAGGCCTTGGACTGCAGCCCCCAGTCAAAGG...CCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TTTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGCTGCAGTCCAAGGCCTaGCAAGGGGAGAAGACCACC +
Preference number: 4 (lower is better)
Translates to: FAHSHWARCRVLFQALCWLQSKA*QGEKTT
Trigger: GGTGGTCTTCTCCCCTTGCCAGGCCTTGGACTGCAG...CCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp ATGGGCCCTCTCTCTGTCTGTCCCAGAAGGAATGGCCAATCAGGCCTCCTCTGCGCCTCTGGGAGACCTTaGGCTGCCTTCATACCCCTG +
Preference number: 4 (lower is better)
Translates to: MGPLSVCPRRNGQSGLLCASGRP*AAFIPL
Trigger: CAGGGGTATGAAGGCAGCCCAAGGTCTCCCAGAGGC...GCAGAGGAGGCCTGATTGGCCATTCCTTCTGGGACAGACAGAGAGAGGGCCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CCA 90 bp TTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGATTCCTCCCGAGCCTCTaGGAGACCTTGGGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LHTLTGLDVGSSSRPSAGFLPSL*ETLGCL
Trigger: AAGGCAGCCCAAGGTCTCCCAGAGGCTCGGGAGGAA...TCCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR GCA 90 bp GGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAACGGGCCCGTCGGGGGTaGTGCGATCCTGGATCACGT +
Preference number: 4 (lower is better)
Translates to: GQISEALGEVLVGQSENKRARRG*CDPGSR
Trigger: ACGTGATCCAGGATCGCAGCACCCCCGACGGGCCCG...TTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGAAGGGCTCTCCCGAGCTaGAGGCCCAAATTGGCATTC +
Preference number: 4 (lower is better)
Translates to: LHTLTGLDVGSSSRPSAGRALPS*RPKLAF
Trigger: GAATGCCAATTTGGGCCTCCAGCTCGGGAGAGCCCT...TCCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGAGGGCACTATGGGTACTaGCCAGCGGATGTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: LHTLTGLDVGSSSRPSAGGHYGY*PADVAG
Trigger: TCCAGCTACATCCGCTGGCCAGTACCCATAGTGCCC...TCCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TTTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGCAAGGACGGGCACTATaGGTACTGGCCAGCGGATGT +
Preference number: 4 (lower is better)
Translates to: FAHSHWARCRVLFQALCWQGRAL*VLASGC
Trigger: ACATCCGCTGGCCAGTACCCATAGTGCCCGTCCTTG...CCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TTTATGGGAACAGGCCCAGAAACTTGCTCTCCAGCTCGTGGCCGGACTGAGCAGAGGGTGTGTTCTGGGTaGCCATCTGGCCCCAGCACT +
Preference number: 4 (lower is better)
Translates to: FMGTGPETCSPARGRTEQRVCSG*PSGPST
Trigger: AGTGCTGGGGCCAGATGGCCACCCAGAACACACCCT...CTGCTCAGTCCGGCCACGAGCTGGAGAGCAAGTTTCTGGGCCTGTTCCCATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp CACAGGGACATGGGGCAGCAGGGCCAGAGTGTTGACCATCAGCAAACAGGGTCCGCACACGTCGCTCTCTaGTCACGGTTGCAAGATGGT +
Preference number: 4 (lower is better)
Translates to: HRDMGQQGQSVDHQQTGSAHVAL*SRLQDG
Trigger: ACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGC...GGACCCTGTTTGCTGATGGTCAACACTCTGGCCCTGCTGCCCCATGTCCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR TCA 90 bp TTTATGGGAACAGGCCCAGAAACTTGCTCTCCAGCTCGTGGCCGGACTGAGCAGGCCAGAAGTCTGGGATaGCGCGTGAACAAAGGTCGG +
Preference number: 4 (lower is better)
Translates to: FMGTGPETCSPARGRTEQARSLG*RVNKGR
Trigger: CCGACCTTTGTTCACGCGTCATCCCAGACTTCTGGC...CTGCTCAGTCCGGCCACGAGCTGGAGAGCAAGTTTCTGGGCCTGTTCCCATAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp ATGGGCCCTCTCTCTGTCTGTCCCAGAAGGAATGGCCAATCAGGCCTCCTCTGCGGAGCTGTAGAATGGTaGATTGGTGCCTGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: MGPLSVCPRRNGQSGLLCGAVEW*IGAWKA
Trigger: GGCCTTCCAGGCACCAATTCACCATTCTACAGCTCC...GCAGAGGAGGCCTGATTGGCCATTCCTTCTGGGACAGACAGAGAGAGGGCCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp AATAGCAGGTCCCCTCGAAGAATAGCAGGTCCCCTTCTGGAATGCACTCTTGAGCCCCCTGTCTCGGAGTaGGGCGGAAAAGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: NSRSPRRIAGPLLECTLEPPVSE*GGKAQG
Trigger: CCCCTGTGCTTTTCCGCCTCACTCCGAGACAGGGGG...CTCAAGAGTGCATTCCAGAAGGGGACCTGCTATTCTTCGAGGGGACCTGCTATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR TCA 90 bp GGGCACACGTCGCTCTCTGGTCACGGTTGCAAGATGGTCTGGAATTCTGCAGGTAGCTCGTGGCCGGACTaGGCAGAGTACATGCCAAGA +
Preference number: 4 (lower is better)
Translates to: GHTSLSGHGCKMVWNSAGSSWPD*AEYMPR
Trigger: TCTTGGCATGTACTCTGCTCAGTCCGGCCACGAGCT...ACCTGCAGAATTCCAGACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GCCGGACTGAGCAGAGTACATGCCAAGAGGGCAGCTATTGCTGATCCCTCCTTTCGCGGGAAGTTGGCATaGAAGGGGCTTCCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: AGLSRVHAKRAAIADPSFRGKLA*KGLPSW
Trigger: CCAGGAAGGAAGCCCCTTGCATGCCAACTTCCCGCG...AAAGGAGGGATCAGCAATAGCTGCCCTCTTGGCATGTACTCTGCTCAGTCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp TTTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGGCTGAAAAGCCCTCATaGGCTTCCTCTGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: FAHSHWARCRVLFQALCWAEKPS*ASSGPW
Trigger: CCAAGGACCAGAGGAAGCGCATGAGGGCTTTTCAGC...CCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp TTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGATCAGTCCCTGGATCCTaGTGTGGCTCTCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LHTLTGLDVGSSSRPSAGSVPGS*CGSPSG
Trigger: ACCAGAAGGAGAGCCACAGCAGGATCCAGGGACTGA...TCCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGGGCTGCAGTCCAAGGCCTGGACAGGCCCAGAAACTTaGTCTCCAGCTCGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: DRKCPAKTFDWGLQSKAWTGPET*SPARGR
Trigger: CCGGCCACGAGCTGGAGAGCAAGTTTCTGGGCCTGT...CCAGGCCTTGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGACACTTTCTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GGCAAATCTCCGTCAAGTTGTCCATTTGACATGTGGCTTTGCACACTCTCACTGGTCGGGCTCCGCGCGTaGGGGAGGCCGGCACAAGAA +
Preference number: 4 (lower is better)
Translates to: GKSPSSCPFDMWLCTLSLVGLRA*GRPAQE
Trigger: TTCTTGTGCCGGCCTCCCCCACGCGCGGAGCCCGAC...CAGTGAGAGTGTGCAAAGCCACATGTCAAATGGACAACTTGACGGAGATTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GTGCTGAAGGGTCCCTGGAAGTGTGGGTTTAAGGCACCCGTCCTTCACACTTCTAAGGGGCTTCCTTCCTaGGTGACCGAGATGGCCCAG +
Preference number: 4 (lower is better)
Translates to: VLKGPWKCGFKAPVLHTSKGLPS*VTEMAQ
Trigger: CTGGGCCATCTCGGTCACCCAGGAAGGAAGCCCCTT...AGAAGTGTGAAGGACGGGTGCCTTAAACCCACACTTCCAGGGACCCTTCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CCA 90 bp GGGCACACGTCGCTCTCTGGTCACGGTTGCAAGATGGTCTGGAATTCTGCAGGTGGAAGCGCGGGAAGTTaGCATGCAAGGGGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: GHTSLSGHGCKMVWNSAGGSAGS*HARGFL
Trigger: AAGGAAGCCCCTTGCATGCCAACTTCCCGCGCTTCC...ACCTGCAGAATTCCAGACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TCTTGCTCATTGGGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGAGGGTGTGTTCTGGGTaGCCATCTGGCCCCAGCACT +
Preference number: 4 (lower is better)
Translates to: SCSLGQISEALGEVLVGQRVCSG*PSGPST
Trigger: AGTGCTGGGGCCAGATGGCCACCCAGAACACACCCT...CTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCCCAATGAGCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp TCTTGCTCATTGGGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGGAGGGCAGCTATTGCTaGTCCCTCCTTTCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SCSLGQISEALGEVLVGQEGSYC*SLLSQV
Trigger: CACCTGGGAAAGGAGGGATCAGCAATAGCTGCCCTC...CTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCCCAATGAGCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp TCAGAGAATAAAACTGTAGAACATAGGGTGAAGAAACGCAGGAGAGGTGAGGGTCGGAGGAGGCCGAAATaGGGCGGCGGGGCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: SENKTVEHRVKKRRRGEGRRRPK*GGGARE
Trigger: CTCCCGAGCCCCGCCGCCGCATTTCGGCCTCCTCCG...ACCCTCACCTCTCCTGCGTTTCTTCACCCTATGTTCTACAGTTTTATTCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GCCGGACTGAGCAGAGTACATGCCAAGAGGGCAGCTATTGCTGATCCCTCCTTTAGGGTACAGTGGCCCTaGTTGAGCTTGCGAATGGCC +
Preference number: 4 (lower is better)
Translates to: AGLSRVHAKRAAIADPSFRVQWP*LSLRMA
Trigger: GGCCATTCGCAAGCTCAAGCAGGGCCACTGTACCCT...AAAGGAGGGATCAGCAATAGCTGCCCTCTTGGCATGTACTCTGCTCAGTCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp CACCCCTCTTTCAACCCAAGAAAGCTCCCAAAGCCCACAGTTCCTCTTACAGCTTGGGGAAAGGGGAACTaGAACTACGGGCGGCCGGAG +
Preference number: 4 (lower is better)
Translates to: HPSFNPRKLPKPTVPLTAWGKGN*NYGRPE
Trigger: CTCCGGCCGCCCGTAGTTCCAGTTCCCCTTTCCCCA...AGCTGTAAGAGGAACTGTGGGCTTTGGGAGCTTTCTTGGGTTGAAAGAGGGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CCA 90 bp GCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCCCTGGGGCTCCGTGGTaGGGAAAGGGGAACTGGAAC +
Preference number: 4 (lower is better)
Translates to: AEAVLSGLKASSGSLYKGPGAPW*GKGNWN
Trigger: GTTCCAGTTCCCCTTTCCCCACCACGGAGCCCCAGG...GCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAACCTGGGGCTCCGTGGTaGGGAAAGGGGAACTGGAAC +
Preference number: 4 (lower is better)
Translates to: GQISEALGEVLVGQSENKPGAPW*GKGNWN
Trigger: GTTCCAGTTCCCCTTTCCCCACCACGGAGCCCCAGG...TTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp ATGGGCCCTCTCTCTGTCTGTCCCAGAAGGAATGGCCAATCAGGCCTCCTCTGCGTCCTGGTCAGCAAATaGGGCAGGTATGGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: MGPLSVCPRRNGQSGLLCVLVSK*GRYGSN
Trigger: ATTGCTGCCATACCTGCCCCATTTGCTGACCAGGAC...GCAGAGGAGGCCTGATTGGCCATTCCTTCTGGGACAGACAGAGAGAGGGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp CGGAACCCTAACTGGCTACCCTTTAGGCAACATCAAGGAAAGTTGTGGAGCCTGTGGAGCCTGCAATGTTaGGCGCTGTCCACCGGGGGT +
Preference number: 4 (lower is better)
Translates to: RNPNWLPFRQHQGKLWSLWSLQC*ALSTGG
Trigger: ACCCCCGGTGGACAGCGCCCAACATTGCAGGCTCCA...CAGGCTCCACAACTTTCCTTGATGTTGCCTAAAGGGTAGCCAGTTAGGGTTCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TCTTGCTCATTGGGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGGCAAAGACCTTTGACTaGGGGCTGCAGTCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SCSLGQISEALGEVLVGQAKTFD*GLQSKA
Trigger: GGCCTTGGACTGCAGCCCCCAGTCAAAGGTCTTTGC...CTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCCCAATGAGCAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TTTATGGGAACAGGCCCAGAAACTTGCTCTCCAGCTCGTGGCCGGACTGAGCAGTTTGGCCACAAACCCTaGCTGCACTTGCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FMGTGPETCSPARGRTEQFGHKP*LHLLCC
Trigger: GCAGCAGAGCAAGTGCAGCCAGGGTTTGTGGCCAAA...CTGCTCAGTCCGGCCACGAGCTGGAGAGCAAGTTTCTGGGCCTGTTCCCATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TTTATGGGAACAGGCCCAGAAACTTGCTCTCCAGCTCGTGGCCGGACTGAGCAGTTACTCCTGCCCTGGTaGGGATGGGGAAAACCAGAC +
Preference number: 4 (lower is better)
Translates to: FMGTGPETCSPARGRTEQLLLPW*GWGKPD
Trigger: GTCTGGTTTTCCCCATCCCCACCAGGGCAGGAGTAA...CTGCTCAGTCCGGCCACGAGCTGGAGAGCAAGTTTCTGGGCCTGTTCCCATAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609883.1
CDS-3UTR TCA 90 bp TTTATGGGAACAGGCCCAGAAACTTGCTCTCCAGCTCGTGGCCGGACTGAGCAGTACAGTGGCCCTGCTTaGGCTTGCGAATGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: FMGTGPETCSPARGRTEQYSGPA*ACEWPF
Trigger: AAAAGGCCATTCGCAAGCTCAAGCAGGGCCACTGTA...CTGCTCAGTCCGGCCACGAGCTGGAGAGCAAGTTTCTGGGCCTGTTCCCATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp GCCGGACTGAGCAGAGTACATGCCAAGAGGGCAGCTATTGCTGATCCCTCCTTTCAGGTTCTGCAGGTCTaGAACTCCCTGAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: AGLSRVHAKRAAIADPSFQVLQV*NSLKSW
Trigger: CCAGGACTTCAGGGAGTTTCAGACCTGCAGAACCTG...AAAGGAGGGATCAGCAATAGCTGCCCTCTTGGCATGTACTCTGCTCAGTCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp TCTTGCTCATTGGGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCCTGCAAAGACCTTTaGCTGGGGGCTGCAGTCCAA +
Preference number: 4 (lower is better)
Translates to: SCSLGQISEALGEVLVGQSCKDL*LGAAVQ
Trigger: TTGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGA...CTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCCCAATGAGCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp TCTTGCTCATTGGGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGAAGCATCTGCATAGCTaGCGAGGGTACAGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: SCSLGQISEALGEVLVGQKHLHS*RGYSGP
Trigger: AGGGCCACTGTACCCTCGGCAGCTATGCAGATGCTT...CTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCCCAATGAGCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGGGCTGCAGTCCAAGGCCTGGAAGCATCTGCATAGCTaGCGAGGGTACAGTGGCCCT +
Preference number: 4 (lower is better)
Translates to: DRKCPAKTFDWGLQSKAWKHLHS*RGYSGP
Trigger: AGGGCCACTGTACCCTCGGCAGCTATGCAGATGCTT...CCAGGCCTTGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGACACTTTCTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp TTTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGACTGAGCAGAGTACATaGCAAGAGGGCAGCTATTGC +
Preference number: 4 (lower is better)
Translates to: FAHSHWARCRVLFQALCWTEQST*QEGSYC
Trigger: GCAATAGCTGCCCTCTTGGCATGTACTCTGCTCAGT...CCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GGGCACACGTCGCTCTCTGGTCACGGTTGCAAGATGGTCTGGAATTCTGCAGGTGAAAGTTGTGGAGCCTaGAATGTTGGGCGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GHTSLSGHGCKMVWNSAGESCGA*NVGRCP
Trigger: TGGACAGCGCCCAACATTGCAGGCTCCACAACTTTC...ACCTGCAGAATTCCAGACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp CGGAACCCTAACTGGCTACCCTTTAGGCAACATCAAGGAAAGTTGTGGAGCCTGCCTTTGACTGGGGGCTaGAGTCCAAGGCCTGGCAAG +
Preference number: 4 (lower is better)
Translates to: RNPNWLPFRQHQGKLWSLPLTGG*SPRPGK
Trigger: CTTGCCAGGCCTTGGACTGCAGCCCCCAGTCAAAGG...CAGGCTCCACAACTTTCCTTGATGTTGCCTAAAGGGTAGCCAGTTAGGGTTCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GGGCACACGTCGCTCTCTGGTCACGGTTGCAAGATGGTCTGGAATTCTGCAGGTCTGCACTTGCTCTGCTaGCAGTCACTGTGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: GHTSLSGHGCKMVWNSAGLHLLC*QSLCRK
Trigger: CTTTCTGCACAGTGACTGGCAGCAGAGCAAGTGCAG...ACCTGCAGAATTCCAGACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGGGCTGCAGTCCAAGGCCTGGAACCCTGGCTGCACTTaGTCTGCTGCCAGTCACTGT +
Preference number: 4 (lower is better)
Translates to: DRKCPAKTFDWGLQSKAWNPGCT*SAASHC
Trigger: ACAGTGACTGGCAGCAGAGCAAGTGCAGCCAGGGTT...CCAGGCCTTGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGACACTTTCTATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GTCCCTGGAAGTGTGGGTTTAAGGCACCCGTCCTTCACACTTCTCCACAGGGACAGCTCACTGCTCATCTaGTCTATCCCTGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: VPGSVGLRHPSFTLLHRDSSLLI*SIPGCS
Trigger: GCTACAGCCAGGGATAGAGCAGATGAGCAGTGAGCT...GTCCCTGTGGAGAAGTGTGAAGGACGGGTGCCTTAAACCCACACTTCCAGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR GCA 90 bp ATGGGCCCTCTCTCTGTCTGTCCCAGAAGGAATGGCCAATCAGGCCTCCTCTGCTGGAAACCAGCTCACTaGTCATCTGCTCTATCCCTG +
Preference number: 4 (lower is better)
Translates to: MGPLSVCPRRNGQSGLLCWKPAH*SSALSL
Trigger: CAGGGATAGAGCAGATGAGCAGTGAGCTGGTTTCCA...GCAGAGGAGGCCTGATTGGCCATTCCTTCTGGGACAGACAGAGAGAGGGCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CCA 90 bp AATAGCAGGTCCCCTCGAAGAATAGCAGGTCCCCTTCTGGAATGCACTCTTGAGGCTGGAGGCCCAAATTaGCATTCTCCCCGCGAAGGG +
Preference number: 4 (lower is better)
Translates to: NSRSPRRIAGPLLECTLEAGGPN*HSPREG
Trigger: CCCTTCGCGGGGAGAATGCCAATTTGGGCCTCCAGC...CTCAAGAGTGCATTCCAGAAGGGGACCTGCTATTCTTCGAGGGGACCTGCTATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CCA 90 bp CACCCCTCTTTCAACCCAAGAAAGCTCCCAAAGCCCACAGTTCCTCTTACAGCTGCCAGCGGATGTAGCTaGAGACATTGCCCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: HPSFNPRKLPKPTVPLTAASGCS*RHCPAR
Trigger: CCTTGCGGGGCAATGTCTCCAGCTACATCCGCTGGC...AGCTGTAAGAGGAACTGTGGGCTTTGGGAGCTTTCTTGGGTTGAAAGAGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CCA 90 bp CGGAACCCTAACTGGCTACCCTTTAGGCAACATCAAGGAAAGTTGTGGAGCCTGAAGGGGCTTCCTTCCTaGGTGACCGAGATGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RNPNWLPFRQHQGKLWSLKGLPS*VTEMAQ
Trigger: CTGGGCCATCTCGGTCACCCAGGAAGGAAGCCCCTT...CAGGCTCCACAACTTTCCTTGATGTTGCCTAAAGGGTAGCCAGTTAGGGTTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCCTGCCGAGGGTACAGTaGCCCTGCTTGAGCTTGCGA +
Preference number: 4 (lower is better)
Translates to: AEAVLSGLKASSGSLYKGLPRVQ*PCLSLR
Trigger: TCGCAAGCTCAAGCAGGGCCACTGTACCCTCGGCAG...GCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGAAGGCCTTTGAGGAATTaGTTTTGGAGGCGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: LHTLTGLDVGSSSRPSAGRPLRN*FWRRQS
Trigger: TGACTGCCGCCTCCAAAACCAATTCCTCAAAGGCCT...TCCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TCTTGCTCATTGGGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGAGTGGGACTCGATTCTaGTTCCTCCGTCTGCTAGGC +
Preference number: 4 (lower is better)
Translates to: SCSLGQISEALGEVLVGQSGTRF*FLRLLG
Trigger: GCCTAGCAGACGGAGGAACCAGAATCGAGTCCCACT...CTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCCCAATGAGCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp ATGGGCCCTCTCTCTGTCTGTCCCAGAAGGAATGGCCAATCAGGCCTCCTCTGCGTCACGGTTGCAAGATaGTCTGGAATTCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: MGPLSVCPRRNGQSGLLCVTVAR*SGILQV
Trigger: GACCTGCAGAATTCCAGACCATCTTGCAACCGTGAC...GCAGAGGAGGCCTGATTGGCCATTCCTTCTGGGACAGACAGAGAGAGGGCCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp ACTGCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGCCAGGTGGCCCTGGTTaGGCACACGTCGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: TAEAVLSGLKASSGSLYKPGGPG*AHVALW
Trigger: CCAGAGAGCGACGTGTGCCCAACCAGGGCCACCTGG...CTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAAACCCTCCTTTCCCAGGTaGCCCTGGTTGGGCACACGT +
Preference number: 4 (lower is better)
Translates to: GRSVRHWVKSWWVSQRIKPSFPR*PWLGTR
Trigger: ACGTGTGCCCAACCAGGGCCACCTGGGAAAGGAGGG...TTTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GGGCACACGTCGCTCTCTGGTCACGGTTGCAAGATGGTCTGGAATTCTGCAGGTTTTGCACACTCTCACTaGGCTAGATGTCGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: GHTSLSGHGCKMVWNSAGFAHSH*ARCRVL
Trigger: GAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAAA...ACCTGCAGAATTCCAGACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TTTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGCATCAAGGAAAGTTGTaGAGCCTGCAATGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: FAHSHWARCRVLFQALCWHQGKL*SLQCWA
Trigger: CGCCCAACATTGCAGGCTCCACAACTTTCCTTGATG...CCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp GATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGGGCTGCAGTCCAAGGCCTGGGCTGTTGAGATTTCCTaGCGCCTCAGACATCTCGAC +
Preference number: 4 (lower is better)
Translates to: DRKCPAKTFDWGLQSKAWAVEIS*RLRHLD
Trigger: GTCGAGATGTCTGAGGCGTCAGGAAATCTCAACAGC...CCAGGCCTTGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGACACTTTCTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp GGGCACACGTCGCTCTCTGGTCACGGTTGCAAGATGGTCTGGAATTCTGCAGGTATTCCGACAGGCCTTTaGGGAATTGGTTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GHTSLSGHGCKMVWNSAGIPTGL*GIGFGG
Trigger: GCCTCCAAAACCAATTCCTCAAAGGCCTGTCGGAAT...ACCTGCAGAATTCCAGACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp ACTGCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGCTCTGGTCCTTGGAGTaGAGCCTGTGCCTGCGTGCC +
Preference number: 4 (lower is better)
Translates to: TAEAVLSGLKASSGSLYKLWSLE*SLCLRA
Trigger: GGCACGCAGGCACAGGCTTCACTCCAAGGACCAGAG...CTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp GGGCACACGTCGCTCTCTGGTCACGGTTGCAAGATGGTCTGGAATTCTGCAGGTTCCTTCATCTCTTGCTaGAAAGCCCTCATGCGCTTC +
Preference number: 4 (lower is better)
Translates to: GHTSLSGHGCKMVWNSAGSFISC*KALMRF
Trigger: GAAGCGCATGAGGGCTTTTCAGCAAGAGATGAAGGA...ACCTGCAGAATTCCAGACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp AATAGCAGGTCCCCTCGAAGAATAGCAGGTCCCCTTCTGGAATGCACTCTTGAGGCCAGAAGTCTGGGATaGCGCGTGAACAAAGGTCGG +
Preference number: 4 (lower is better)
Translates to: NSRSPRRIAGPLLECTLEARSLG*RVNKGR
Trigger: CCGACCTTTGTTCACGCGTCATCCCAGACTTCTGGC...CTCAAGAGTGCATTCCAGAAGGGGACCTGCTATTCTTCGAGGGGACCTGCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR TCA 90 bp GGGCACACGTCGCTCTCTGGTCACGGTTGCAAGATGGTCTGGAATTCTGCAGGTAGGTCTGAAACTCCCTaGAGTCCTGGTCAGCAAATG +
Preference number: 4 (lower is better)
Translates to: GHTSLSGHGCKMVWNSAGRSETP*SPGQQM
Trigger: CATTTGCTGACCAGGACTTCAGGGAGTTTCAGACCT...ACCTGCAGAATTCCAGACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp GGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAAAGCTCGTGGCCGGACTaGGCAGAGTACATGCCAAGA +
Preference number: 4 (lower is better)
Translates to: GQISEALGEVLVGQSENKSSWPD*AEYMPR
Trigger: TCTTGGCATGTACTCTGCTCAGTCCGGCCACGAGCT...TTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp GATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGGGCTGCAGTCCAAGGCCTGGGAAACGCAGGAGAGGTaGGGGTTAGGAACAACCAGA +
Preference number: 4 (lower is better)
Translates to: DRKCPAKTFDWGLQSKAWETQER*GLGTTR
Trigger: TCTGGTTGTTCCTAACCCTCACCTCTCCTGCGTTTC...CCAGGCCTTGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGACACTTTCTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GCCTCCTCTGCAACTCCAAGGATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGAGGGTACAGTGGCCCTaGTTGAGCTTGCGAATGGCC +
Preference number: 4 (lower is better)
Translates to: ASSATPRIESVLQRPLTGRVQWP*LSLRMA
Trigger: GGCCATTCGCAAGCTCAAGCAGGGCCACTGTACCCT...CCCAGTCAAAGGTCTTTGCAGGACACTTTCTATCCTTGGAGTTGCAGAGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp TTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGAAGAATGGTGAATTGGTaGCTGGAAGGCCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: LHTLTGLDVGSSSRPSAGRMVNW*LEGLPE
Trigger: TTCTGGAAGGCCTTCCAGGCACCAATTCACCATTCT...TCCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp TTTATGGGAACAGGCCCAGAAACTTGCTCTCCAGCTCGTGGCCGGACTGAGCAGACTGAGCAGAGTACATaGCAAGAGGGCAGCTATTGC +
Preference number: 4 (lower is better)
Translates to: FMGTGPETCSPARGRTEQTEQST*QEGSYC
Trigger: GCAATAGCTGCCCTCTTGGCATGTACTCTGCTCAGT...CTGCTCAGTCCGGCCACGAGCTGGAGAGCAAGTTTCTGGGCCTGTTCCCATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAAAGCTGGAGGCCCAAATTaGCATTCTCCCCGCGAAGGG +
Preference number: 4 (lower is better)
Translates to: GRSVRHWVKSWWVSQRIKAGGPN*HSPREG
Trigger: CCCTTCGCGGGGAGAATGCCAATTTGGGCCTCCAGC...TTTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCCAAGGACGGGCACTATaGGTACTGGCCAGCGGATGT +
Preference number: 4 (lower is better)
Translates to: AEAVLSGLKASSGSLYKGQGRAL*VLASGC
Trigger: ACATCCGCTGGCCAGTACCCATAGTGCCCGTCCTTG...GCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp AATAGCAGGTCCCCTCGAAGAATAGCAGGTCCCCTTCTGGAATGCACTCTTGAGTTCTGGGTGGCCATCTaGCCCCAGCACTCAAACTCG +
Preference number: 4 (lower is better)
Translates to: NSRSPRRIAGPLLECTLEFWVAI*PQHSNS
Trigger: CGAGTTTGAGTGCTGGGGCCAGATGGCCACCCAGAA...CTCAAGAGTGCATTCCAGAAGGGGACCTGCTATTCTTCGAGGGGACCTGCTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CCA 90 bp TTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGACATTGGGTGAAGTCCTaGTGGGTCAGTCAGAGAATA +
Preference number: 4 (lower is better)
Translates to: LHTLTGLDVGSSSRPSAGHWVKS*WVSQRI
Trigger: TATTCTCTGACTGACCCACCAGGACTTCACCCAATG...TCCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp AGAATGATCGTTGCTGCTTCTTTCTCCTCCTCCTCTTCTTCCTCCTTCTCCTCTTGGAGCCTGCAATGTTaGGCGCTGTCCACCGGGGGT +
Preference number: 4 (lower is better)
Translates to: RMIVAASFSSSSSSSFSSWSLQC*ALSTGG
Trigger: ACCCCCGGTGGACAGCGCCCAACATTGCAGGCTCCA...AGAGGAGAAGGAGGAAGAAGAGGAGGAGGAGAAAGAAGCAGCAACGATCATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TTTATGGGAACAGGCCCAGAAACTTGCTCTCCAGCTCGTGGCCGGACTGAGCAGAGAAGCAGTGCTTTCTaGACTCAAGGCAAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: FMGTGPETCSPARGRTEQRSSAF*TQGKQW
Trigger: CCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCT...CTGCTCAGTCCGGCCACGAGCTGGAGAGCAAGTTTCTGGGCCTGTTCCCATAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCTCCTGCCCCAGAGGGTaGAAACCAGCTCACTGCTCA +
Preference number: 4 (lower is better)
Translates to: AEAVLSGLKASSGSLYKGSCPRG*KPAHCS
Trigger: TGAGCAGTGAGCTGGTTTCCACCCTCTGGGGCAGGA...GCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
3UTR CAA 72 bp TGCTTTCTTCCCTTTGGCCACAAACCCTGGCTGCACTaGCTCTGCTGCCAGTCACTGTGCAGAAAGTCCAGT +
Preference number: 4 (lower is better)
Translates to: CFLPFGHKPWLH*LCCQSLCRKSS
Trigger: ACTGGACTTTCTGCACAGTGACTGGCAGCAGAGCAAGTGCAGCCAGGGTTTGTGGCCAAAGGGAAGAAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp CATTTCTGGATACCATCCTGCTCACCATCGATTATATCTAGCAACTGGCCTCAGGCGCCCCCGGGGAAATaGACCTCATGGTCGGCTATG +
Preference number: 4 (lower is better)
Translates to: HFWIPSCSPSIISSNWPQAPPGK*TSWSAM
Trigger: CATAGCCGACCATGAGGTTCATTTCCCCGGGGGCGC...CTGAGGCCAGTTGCTAGATATAATCGATGGTGAGCAGGATGGTATCCAGAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp GCCGGACTGAGCAGAGTACATGCCAAGAGGGCAGCTATTGCTGATCCCTCCTTTCCTTGGCTTCGCCAGTaGAAAAGGAGATCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: AGLSRVHAKRAAIADPSFPWLRQ*KRRSER
Trigger: CCTTTCTGATCTCCTTTTTCACTGGCGAAGCCAAGG...AAAGGAGGGATCAGCAATAGCTGCCCTCTTGGCATGTACTCTGCTCAGTCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp TCTTGCTCATTGGGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCCTTCATCTCTTGCTaGAAAGCCCTCATGCGCTTC +
Preference number: 4 (lower is better)
Translates to: SCSLGQISEALGEVLVGQSFISC*KALMRF
Trigger: GAAGCGCATGAGGGCTTTTCAGCAAGAGATGAAGGA...CTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCCCAATGAGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp TCTTGCTCATTGGGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGAGGTCTGAAACTCCCTaGAGTCCTGGTCAGCAAATG +
Preference number: 4 (lower is better)
Translates to: SCSLGQISEALGEVLVGQRSETP*SPGQQM
Trigger: CATTTGCTGACCAGGACTTCAGGGAGTTTCAGACCT...CTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCCCAATGAGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp GGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAAGCTTTACTGTGTCACTaGAGCACAGCAGCAGGCCAG +
Preference number: 4 (lower is better)
Translates to: GQISEALGEVLVGQSENKALLCH*STAAGQ
Trigger: CTGGCCTGCTGCTGTGCTTCAGTGACACAGTAAAGC...TTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp TTTATGGGAACAGGCCCAGAAACTTGCTCTCCAGCTCGTGGCCGGACTGAGCAGATGAAGGTCTCTAGCTaGATCAGGAATTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: FMGTGPETCSPARGRTEQMKVSS*IRNSAR
Trigger: CCTGGCTGAATTCCTGATGCAGCTAGAGACCTTCAT...CTGCTCAGTCCGGCCACGAGCTGGAGAGCAAGTTTCTGGGCCTGTTCCCATAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAAGCTGAAAAGCCCTCATaGGCTTCCTCTGGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GQISEALGEVLVGQSENKAEKPS*ASSGPW
Trigger: CCAAGGACCAGAGGAAGCGCATGAGGGCTTTTCAGC...TTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCTCAGTCCCTGGATCCTaGTGTGGCTCTCCTTCTGGT +
Preference number: 4 (lower is better)
Translates to: AEAVLSGLKASSGSLYKGSVPGS*CGSPSG
Trigger: ACCAGAAGGAGAGCCACAGCAGGATCCAGGGACTGA...GCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp ATGGGCCCTCTCTCTGTCTGTCCCAGAAGGAATGGCCAATCAGGCCTCCTCTGCGATGGTCTGGAATTCTaGAGGTCTTCTTCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: MGPLSVCPRRNGQSGLLCDGLEF*RSSSGS
Trigger: AGAACCTGAAGAAGACCTGCAGAATTCCAGACCATC...GCAGAGGAGGCCTGATTGGCCATTCCTTCTGGGACAGACAGAGAGAGGGCCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCACCTGAGTTTGTACCTAGAACAGGCCCAGAAACTTaGTCTCCAGCTCGTGGCCGG +
Preference number: 4 (lower is better)
Translates to: DSRQAVGLFIRAPEFVPRTGPET*SPARGR
Trigger: CCGGCCACGAGCTGGAGAGCAAGTTTCTGGGCCTGT...TCTAGGTACAAACTCAGGTGCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp TCAGAGAATAAAACTGTAGAACATAGGGTGAAGAAACGCAGGAGAGGTGAGGGTGCTGTCCACCGGGGGTaGCCAGGAGGGCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: SENKTVEHRVKKRRRGEGAVHRG*PGGQCG
Trigger: ACCACATTGCCCTCCTGGGCACCCCCGGTGGACAGC...ACCCTCACCTCTCCTGCGTTTCTTCACCCTATGTTCTACAGTTTTATTCTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp TCAGACTCCCATGAGGAACAGAGGTTGAATTTACTATGCTTTCTTCCCTTTGGCGCTGTCCACCGGGGGTaGCCAGGAGGGCAATGTGGT +
Preference number: 4 (lower is better)
Translates to: SDSHEEQRLNLLCFLPFGAVHRG*PGGQCG
Trigger: ACCACATTGCCCTCCTGGGCACCCCCGGTGGACAGC...GCCAAAGGGAAGAAAGCATAGTAAATTCAACCTCTGTTCCTCATGGGAGTCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GCCGGACTGAGCAGAGTACATGCCAAGAGGGCAGCTATTGCTGATCCCTCCTTTAAAGTTGTTTACTCCTaGCCTGGTGGGGATGGGGAA +
Preference number: 4 (lower is better)
Translates to: AGLSRVHAKRAAIADPSFKVVYS*PGGDGE
Trigger: TTCCCCATCCCCACCAGGGCAGGAGTAAACAACTTT...AAAGGAGGGATCAGCAATAGCTGCCCTCTTGGCATGTACTCTGCTCAGTCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609883.1
CDS-3UTR CCA 90 bp AGAATGATCGTTGCTGCTTCTTTCTCCTCCTCCTCTTCTTCCTCCTTCTCCTCTGCCAGCGGATGTAGCTaGAGACATTGCCCCGCAAGG +
Preference number: 4 (lower is better)
Translates to: RMIVAASFSSSSSSSFSSASGCS*RHCPAR
Trigger: CCTTGCGGGGCAATGTCTCCAGCTACATCCGCTGGC...AGAGGAGAAGGAGGAAGAAGAGGAGGAGGAGAAAGAAGCAGCAACGATCATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GTCCCTGGAAGTGTGGGTTTAAGGCACCCGTCCTTCACACTTCTCCACAGGGACGGGGTGCTGCGATCCTaGATCACGTTAATCAAAAGA +
Preference number: 4 (lower is better)
Translates to: VPGSVGLRHPSFTLLHRDGVLRS*ITLIKR
Trigger: TCTTTTGATTAACGTGATCCAGGATCGCAGCACCCC...GTCCCTGTGGAGAAGTGTGAAGGACGGGTGCCTTAAACCCACACTTCCAGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CCA 90 bp TTTATGGGAACAGGCCCAGAAACTTGCTCTCCAGCTCGTGGCCGGACTGAGCAGTTGAGGAATTGGTTTTaGAGGCGGCAGTCATCCCAA +
Preference number: 4 (lower is better)
Translates to: FMGTGPETCSPARGRTEQLRNWF*RRQSSQ
Trigger: TTGGGATGACTGCCGCCTCCAAAACCAATTCCTCAA...CTGCTCAGTCCGGCCACGAGCTGGAGAGCAAGTTTCTGGGCCTGTTCCCATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp CGGAACCCTAACTGGCTACCCTTTAGGCAACATCAAGGAAAGTTGTGGAGCCTGAGTGGGACTCGATTCTaGTTCCTCCGTCTGCTAGGC +
Preference number: 4 (lower is better)
Translates to: RNPNWLPFRQHQGKLWSLSGTRF*FLRLLG
Trigger: GCCTAGCAGACGGAGGAACCAGAATCGAGTCCCACT...CAGGCTCCACAACTTTCCTTGATGTTGCCTAAAGGGTAGCCAGTTAGGGTTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GTCCCTGGAAGTGTGGGTTTAAGGCACCCGTCCTTCACACTTCTCCACAGGGACTGTAGAATGGTGAATTaGTGCCTGGAAGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: VPGSVGLRHPSFTLLHRDCRMVN*CLEGLP
Trigger: TGGAAGGCCTTCCAGGCACCAATTCACCATTCTACA...GTCCCTGTGGAGAAGTGTGAAGGACGGGTGCCTTAAACCCACACTTCCAGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CCA 90 bp TGCAACAATAACACATGTATTCCAAAAGGGTTTCCTCCCGAGCCTCTGGGAGACTTTCCCAGGTGGCCCTaGTTGGGCACACGTCGCTCT +
Preference number: 4 (lower is better)
Translates to: CNNNTCIPKGFPPEPLGDFPRWP*LGTRRS
Trigger: AGAGCGACGTGTGCCCAACCAGGGCCACCTGGGAAA...GTCTCCCAGAGGCTCGGGAGGAAACCCTTTTGGAATACATGTGTTATTGTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CCA 90 bp TCTTGCTCATTGGGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGCCTCTGCTGGAGGTGTaGCATGAAATGAGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: SCSLGQISEALGEVLVGQPLLEV*HEMSVG
Trigger: TCCTACACTCATTTCATGCCACACCTCCAGCAGAGG...CTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCCCAATGAGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGATGTCCATTTGACATGTaGCTTTGCACACTCTCACTG +
Preference number: 4 (lower is better)
Translates to: LHTLTGLDVGSSSRPSAGCPFDM*LCTLSL
Trigger: CAGTGAGAGTGTGCAAAGCCACATGTCAAATGGACA...TCCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCAGGGCTCCAGATGTGTaGCAAGTCAGTCCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: AEAVLSGLKASSGSLYKGRAPDV*QVSPRA
Trigger: GGCTCTTGGACTGACTTGCCACACATCTGGAGCCCT...GCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TCTTGCTCATTGGGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGCATCAAGGAAAGTTGTaGAGCCTGCAATGTTGGGCG +
Preference number: 4 (lower is better)
Translates to: SCSLGQISEALGEVLVGQHQGKL*SLQCWA
Trigger: CGCCCAACATTGCAGGCTCCACAACTTTCCTTGATG...CTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCCCAATGAGCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCGTGCTTGCCTCTGTGTaGTGGGACTCTGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: AEAVLSGLKASSGSLYKGVLASV*WDSEWL
Trigger: CAGCCATTCAGAGTCCCACCACACAGAGGCAAGCAC...GCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609883.1
CDS-3UTR TCA 90 bp GGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAAGCTGTTGAGATTTCCTaGCGCCTCAGACATCTCGAC +
Preference number: 4 (lower is better)
Translates to: GQISEALGEVLVGQSENKAVEIS*RLRHLD
Trigger: GTCGAGATGTCTGAGGCGTCAGGAAATCTCAACAGC...TTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp TCAGAGAATAAAACTGTAGAACATAGGGTGAAGAAACGCAGGAGAGGTGAGGGTGGCTTCCTTCCTGGGTaGCCGAGATGGCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: SENKTVEHRVKKRRRGEGGFLPG*PRWPSP
Trigger: AGGACTGGGCCATCTCGGTCACCCAGGAAGGAAGCC...ACCCTCACCTCTCCTGCGTTTCTTCACCCTATGTTCTACAGTTTTATTCTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp GGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAAAGGAGCTGTAGAATGGTaGATTGGTGCCTGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: GRSVRHWVKSWWVSQRIKGAVEW*IGAWKA
Trigger: GGCCTTCCAGGCACCAATTCACCATTCTACAGCTCC...TTTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp GGGCACACGTCGCTCTCTGGTCACGGTTGCAAGATGGTCTGGAATTCTGCAGGTGTCAAGTTGTCCATTTaGCATGTGGCTTTGCACACT +
Preference number: 4 (lower is better)
Translates to: GHTSLSGHGCKMVWNSAGVKLSI*HVALHT
Trigger: AGTGTGCAAAGCCACATGTCAAATGGACAACTTGAC...ACCTGCAGAATTCCAGACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp GCCGGACTGAGCAGAGTACATGCCAAGAGGGCAGCTATTGCTGATCCCTCCTTTTCAGTCCAAGAGCCCTaGTACAGGAATCTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: AGLSRVHAKRAAIADPSFSVQEP*YRNLCK
Trigger: TTTGCACAGATTCCTGTATCAGGGCTCTTGGACTGA...AAAGGAGGGATCAGCAATAGCTGCCCTCTTGGCATGTACTCTGCTCAGTCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp GATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGGGCTGCAGTCCAAGGCCTGGTCGGTCAGACTCCCATaGGGAACAGAGGTTGAATTT +
Preference number: 4 (lower is better)
Translates to: DRKCPAKTFDWGLQSKAWSVRLP*GTEVEF
Trigger: AAATTCAACCTCTGTTCCTCATGGGAGTCTGACCGA...CCAGGCCTTGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGACACTTTCTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp GCCTCCTCTGCAACTCCAAGGATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGATCCTAAGGTCCGCCTaGGATTATCGGTCAGACTCC +
Preference number: 4 (lower is better)
Translates to: ASSATPRIESVLQRPLTGILRSA*DYRSDS
Trigger: GGAGTCTGACCGATAATCTCAGGCGGACCTTAGGAT...CCCAGTCAAAGGTCTTTGCAGGACACTTTCTATCCTTGGAGTTGCAGAGGAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp GACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCACCTGAGTTTGTACCTAGAGCAGGGCCAGAGTGTTaGCCATCAGCAAACAGGGTC +
Preference number: 4 (lower is better)
Translates to: DSRQAVGLFIRAPEFVPRAGPEC*PSANRV
Trigger: GACCCTGTTTGCTGATGGTCAACACTCTGGCCCTGC...TCTAGGTACAAACTCAGGTGCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR GCA 90 bp GCCGGACTGAGCAGAGTACATGCCAAGAGGGCAGCTATTGCTGATCCCTCCTTTATGAAGGTCTCTAGCTaGATCAGGAATTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: AGLSRVHAKRAAIADPSFMKVSS*IRNSAR
Trigger: CCTGGCTGAATTCCTGATGCAGCTAGAGACCTTCAT...AAAGGAGGGATCAGCAATAGCTGCCCTCTTGGCATGTACTCTGCTCAGTCCGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp CGGAACCCTAACTGGCTACCCTTTAGGCAACATCAAGGAAAGTTGTGGAGCCTGAGTGAAGCCTGTGCCTaGGTGCCTCTTGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: RNPNWLPFRQHQGKLWSLSEACA*VPLGLH
Trigger: ATGAAGACCAAGAGGCACGCAGGCACAGGCTTCACT...CAGGCTCCACAACTTTCCTTGATGTTGCCTAAAGGGTAGCCAGTTAGGGTTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGGGCTGCAGTCCAAGGCCTGGCAATCAGGCCTCCTCTaGAACTCCAAGGATAGAAAG +
Preference number: 4 (lower is better)
Translates to: DRKCPAKTFDWGLQSKAWQSGLL*NSKDRK
Trigger: CTTTCTATCCTTGGAGTTGCAGAGGAGGCCTGATTG...CCAGGCCTTGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGACACTTTCTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp TTTATGGGAACAGGCCCAGAAACTTGCTCTCCAGCTCGTGGCCGGACTGAGCAGGTGTGTGTTTTTCACTaGAGAAGCAGTGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: FMGTGPETCSPARGRTEQVCVFH*RSSAFW
Trigger: CCAGAAAGCACTGCTTCTGCAGTGAAAAACACACAC...CTGCTCAGTCCGGCCACGAGCTGGAGAGCAAGTTTCTGGGCCTGTTCCCATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp ACTGCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGTGGGAGACCTTGGGCTaGCTTCATACCCCTGCATGC +
Preference number: 4 (lower is better)
Translates to: TAEAVLSGLKASSGSLYKWETLG*LHTPAC
Trigger: GCATGCAGGGGTATGAAGGCAGCCCAAGGTCTCCCA...CTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CCA 90 bp GAAAGCTTTAGCATACAGAGCAGCTTCTTATCTTCACAACACAGTAATGCAACAGTCGGGCTCCGCGCGTaGGGGAGGCCGGCACAAGAA +
Preference number: 4 (lower is better)
Translates to: ESFSIQSSFLSSQHSNATVGLRA*GRPAQE
Trigger: TTCTTGTGCCGGCCTCCCCCACGCGCGGAGCCCGAC...TGTTGCATTACTGTGTTGTGAAGATAAGAAGCTGCTCTGTATGCTAAAGCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CCA 90 bp GATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGGGCTGCAGTCCAAGGCCTGGTTGAGGAATTGGTTTTaGAGGCGGCAGTCATCCCAA +
Preference number: 4 (lower is better)
Translates to: DRKCPAKTFDWGLQSKAWLRNWF*RRQSSQ
Trigger: TTGGGATGACTGCCGCCTCCAAAACCAATTCCTCAA...CCAGGCCTTGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGACACTTTCTATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAAAGCACACGTCGCTCTCTaGTCACGGTTGCAAGATGGT +
Preference number: 4 (lower is better)
Translates to: GRSVRHWVKSWWVSQRIKAHVAL*SRLQDG
Trigger: ACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGC...TTTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp CACCCCTCTTTCAACCCAAGAAAGCTCCCAAAGCCCACAGTTCCTCTTACAGCTAACCAGTCAGAGGACTaGGTTTCTCTGCGACTCCTC +
Preference number: 4 (lower is better)
Translates to: HPSFNPRKLPKPTVPLTANQSED*VSLRLL
Trigger: GAGGAGTCGCAGAGAAACCCAGTCCTCTGACTGGTT...AGCTGTAAGAGGAACTGTGGGCTTTGGGAGCTTTCTTGGGTTGAAAGAGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CCA 90 bp CGGAACCCTAACTGGCTACCCTTTAGGCAACATCAAGGAAAGTTGTGGAGCCTGAACCAGTCAGAGGACTaGGTTTCTCTGCGACTCCTC +
Preference number: 4 (lower is better)
Translates to: RNPNWLPFRQHQGKLWSLNQSED*VSLRLL
Trigger: GAGGAGTCGCAGAGAAACCCAGTCCTCTGACTGGTT...CAGGCTCCACAACTTTCCTTGATGTTGCCTAAAGGGTAGCCAGTTAGGGTTCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCACCTGAGTTTGTACCTAGACTTGCCTCTGTGTGGTaGGACTCTGAATGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: DSRQAVGLFIRAPEFVPRLASVW*DSEWLG
Trigger: CCCCAGCCATTCAGAGTCCCACCACACAGAGGCAAG...TCTAGGTACAAACTCAGGTGCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609883.1
CDS-3UTR TCA 90 bp GCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCATTCCGACAGGCCTTTaGGGAATTGGTTTTGGAGGC +
Preference number: 4 (lower is better)
Translates to: AEAVLSGLKASSGSLYKGIPTGL*GIGFGG
Trigger: GCCTCCAAAACCAATTCCTCAAAGGCCTGTCGGAAT...GCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp GACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCACCTGAGTTTGTACCTAGACAGGTTCTGCAGGTCTaGAACTCCCTGAAGTCCTGG +
Preference number: 4 (lower is better)
Translates to: DSRQAVGLFIRAPEFVPRQVLQV*NSLKSW
Trigger: CCAGGACTTCAGGGAGTTTCAGACCTGCAGAACCTG...TCTAGGTACAAACTCAGGTGCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp ATGGGCCCTCTCTCTGTCTGTCCCAGAAGGAATGGCCAATCAGGCCTCCTCTGCTTTACAATGGCAGAATaGTCGTTGCTGCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: MGPLSVCPRRNGQSGLLCFTMAE*SLLLLS
Trigger: AGAAAGAAGCAGCAACGATCATTCTGCCATTGTAAA...GCAGAGGAGGCCTGATTGGCCATTCCTTCTGGGACAGACAGAGAGAGGGCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp TGCAACAATAACACATGTATTCCAAAAGGGTTTCCTCCCGAGCCTCTGGGAGACTCCTGCAAAGACCTTTaGCTGGGGGCTGCAGTCCAA +
Preference number: 4 (lower is better)
Translates to: CNNNTCIPKGFPPEPLGDSCKDL*LGAAVQ
Trigger: TTGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGA...GTCTCCCAGAGGCTCGGGAGGAAACCCTTTTGGAATACATGTGTTATTGTTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR TCA 90 bp AGAATGATCGTTGCTGCTTCTTTCTCCTCCTCCTCTTCTTCCTCCTTCTCCTCTTCTGAGGGTTCAGGGTaGGAAGCACCATGGGAACAG +
Preference number: 4 (lower is better)
Translates to: RMIVAASFSSSSSSSFSSSEGSG*EAPWEQ
Trigger: CTGTTCCCATGGTGCTTCTCACCCTGAACCCTCAGA...AGAGGAGAAGGAGGAAGAAGAGGAGGAGGAGAAAGAAGCAGCAACGATCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR GCA 90 bp TCAGACTCCCATGAGGAACAGAGGTTGAATTTACTATGCTTTCTTCCCTTTGGCCGCGGGAAGTTGGCATaGAAGGGGCTTCCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SDSHEEQRLNLLCFLPFGRGKLA*KGLPSW
Trigger: CCAGGAAGGAAGCCCCTTGCATGCCAACTTCCCGCG...GCCAAAGGGAAGAAAGCATAGTAAATTCAACCTCTGTTCCTCATGGGAGTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp TTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGATTCTGGATACCATCCTaGTCACCATCGATTATATCT +
Preference number: 4 (lower is better)
Translates to: LHTLTGLDVGSSSRPSAGFWIPS*SPSIIS
Trigger: AGATATAATCGATGGTGAGCAGGATGGTATCCAGAA...TCCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp AGAATGATCGTTGCTGCTTCTTTCTCCTCCTCCTCTTCTTCCTCCTTCTCCTCTCTCTTCCAGGCCCTCTaGTGGAGGTGTGGCATGAAA +
Preference number: 4 (lower is better)
Translates to: RMIVAASFSSSSSSSFSSLFQAL*WRCGMK
Trigger: TTTCATGCCACACCTCCAGCAGAGGGCCTGGAAGAG...AGAGGAGAAGGAGGAAGAAGAGGAGGAGGAGAAAGAAGCAGCAACGATCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GTCCCTGGAAGTGTGGGTTTAAGGCACCCGTCCTTCACACTTCTCCACAGGGACAAAGGTAAACTCAAGTaGTGTAAGTGGAACCAGCCT +
Preference number: 4 (lower is better)
Translates to: VPGSVGLRHPSFTLLHRDKGKLK*CKWNQP
Trigger: AGGCTGGTTCCACTTACAGCACTTGAGTTTACCTTT...GTCCCTGTGGAGAAGTGTGAAGGACGGGTGCCTTAAACCCACACTTCCAGGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR GCA 90 bp TCTTGCTCATTGGGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGGTGTGTGTTTTTCACTaGAGAAGCAGTGCTTTCTGG +
Preference number: 4 (lower is better)
Translates to: SCSLGQISEALGEVLVGQVCVFH*RSSAFW
Trigger: CCAGAAAGCACTGCTTCTGCAGTGAAAAACACACAC...CTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCCCAATGAGCAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAAACTGCACTTGCTCTGCTaGCAGTCACTGTGCAGAAAG +
Preference number: 4 (lower is better)
Translates to: GRSVRHWVKSWWVSQRIKLHLLC*QSLCRK
Trigger: CTTTCTGCACAGTGACTGGCAGCAGAGCAAGTGCAG...TTTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GGCAAATCTCCGTCAAGTTGTCCATTTGACATGTGGCTTTGCACACTCTCACTGTGGCTGCACTTGCTCTaGTGCCAGTCACTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: GKSPSSCPFDMWLCTLSLWLHLL*CQSLCR
Trigger: TCTGCACAGTGACTGGCAGCAGAGCAAGTGCAGCCA...CAGTGAGAGTGTGCAAAGCCACATGTCAAATGGACAACTTGACGGAGATTTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TGCAACAATAACACATGTATTCCAAAAGGGTTTCCTCCCGAGCCTCTGGGAGACCCCTGGATCCTGCTGTaGCTCTCCTTCTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: CNNNTCIPKGFPPEPLGDPWILL*LSFWFL
Trigger: CAGAAACCAGAAGGAGAGCCACAGCAGGATCCAGGG...GTCTCCCAGAGGCTCGGGAGGAAACCCTTTTGGAATACATGTGTTATTGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CCA 90 bp AGAATGATCGTTGCTGCTTCTTTCTCCTCCTCCTCTTCTTCCTCCTTCTCCTCTCCCTGGATCCTGCTGTaGCTCTCCTTCTGGTTTCTG +
Preference number: 4 (lower is better)
Translates to: RMIVAASFSSSSSSSFSSPWILL*LSFWFL
Trigger: CAGAAACCAGAAGGAGAGCCACAGCAGGATCCAGGG...AGAGGAGAAGGAGGAAGAAGAGGAGGAGGAGAAAGAAGCAGCAACGATCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp CATTTCTGGATACCATCCTGCTCACCATCGATTATATCTAGCAACTGGCCTCAGAAGAAGGGTGTGTTCTaGGTGGCCATCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: HFWIPSCSPSIISSNWPQKKGVF*VAIWPQ
Trigger: CTGGGGCCAGATGGCCACCCAGAACACACCCTTCTT...CTGAGGCCAGTTGCTAGATATAATCGATGGTGAGCAGGATGGTATCCAGAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCGTCACGGTTGCAAGATaGTCTGGAATTCTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: AEAVLSGLKASSGSLYKGVTVAR*SGILQV
Trigger: GACCTGCAGAATTCCAGACCATCTTGCAACCGTGAC...GCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TCAGAGAATAAAACTGTAGAACATAGGGTGAAGAAACGCAGGAGAGGTGAGGGTTTTCCCAGGTGGCCCTaGTTGGGCACACGTCGCTCT +
Preference number: 4 (lower is better)
Translates to: SENKTVEHRVKKRRRGEGFPRWP*LGTRRS
Trigger: AGAGCGACGTGTGCCCAACCAGGGCCACCTGGGAAA...ACCCTCACCTCTCCTGCGTTTCTTCACCCTATGTTCTACAGTTTTATTCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TCTTGCTCATTGGGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTGGGTGAAGTCCTGGTaGGTCAGTCAGAGAATAAAA +
Preference number: 4 (lower is better)
Translates to: SCSLGQISEALGEVLVGQWVKSW*VSQRIK
Trigger: TTTTATTCTCTGACTGACCCACCAGGACTTCACCCA...CTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCCCAATGAGCAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCACCTGAGTTTGTACCTAGAAGGGCTCCAGATGTGTaGCAAGTCAGTCCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: DSRQAVGLFIRAPEFVPRRAPDV*QVSPRA
Trigger: GGCTCTTGGACTGACTTGCCACACATCTGGAGCCCT...TCTAGGTACAAACTCAGGTGCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TCAGACTCCCATGAGGAACAGAGGTTGAATTTACTATGCTTTCTTCCCTTTGGCCTGCAGTCCAAGGCCTaGCAAGGGGAGAAGACCACC +
Preference number: 4 (lower is better)
Translates to: SDSHEEQRLNLLCFLPFGLQSKA*QGEKTT
Trigger: GGTGGTCTTCTCCCCTTGCCAGGCCTTGGACTGCAG...GCCAAAGGGAAGAAAGCATAGTAAATTCAACCTCTGTTCCTCATGGGAGTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TGCAACAATAACACATGTATTCCAAAAGGGTTTCCTCCCGAGCCTCTGGGAGACTTTGGCCACAAACCCTaGCTGCACTTGCTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: CNNNTCIPKGFPPEPLGDFGHKP*LHLLCC
Trigger: GCAGCAGAGCAAGTGCAGCCAGGGTTTGTGGCCAAA...GTCTCCCAGAGGCTCGGGAGGAAACCCTTTTGGAATACATGTGTTATTGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CCA 90 bp GGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAAATGCTTTCTTCCCTTTaGCCACAAACCCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: GQISEALGEVLVGQSENKMLSSL*PQTLAA
Trigger: TGCAGCCAGGGTTTGTGGCCAAAGGGAAGAAAGCAT...TTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp TCAGAGAATAAAACTGTAGAACATAGGGTGAAGAAACGCAGGAGAGGTGAGGGTGTCTGGGATGACGCGTaGACAAAGGTCGGCTCCATC +
Preference number: 4 (lower is better)
Translates to: SENKTVEHRVKKRRRGEGVWDDA*TKVGSI
Trigger: GATGGAGCCGACCTTTGTTCACGCGTCATCCCAGAC...ACCCTCACCTCTCCTGCGTTTCTTCACCCTATGTTCTACAGTTTTATTCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp GCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCCTGTATTATGGGAGGTaGTGCACCCAGGAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: AEAVLSGLKASSGSLYKGLYYGR*CTQEVF
Trigger: GAAAACTTCCTGGGTGCATCACCTCCCATAATACAG...GCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp GCCGGACTGAGCAGAGTACATGCCAAGAGGGCAGCTATTGCTGATCCCTCCTTTGGAAATACAAGAGGGTaGCCAGTTCATTTATGGGAA +
Preference number: 4 (lower is better)
Translates to: AGLSRVHAKRAAIADPSFGNTRG*PVHLWE
Trigger: TTCCCATAAATGAACTGGTCACCCTCTTGTATTTCC...AAAGGAGGGATCAGCAATAGCTGCCCTCTTGGCATGTACTCTGCTCAGTCCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp GCCTCCTCTGCAACTCCAAGGATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGTCAGTCCAAGAGCCCTaGTACAGGAATCTGTGCAAA +
Preference number: 4 (lower is better)
Translates to: ASSATPRIESVLQRPLTGSVQEP*YRNLCK
Trigger: TTTGCACAGATTCCTGTATCAGGGCTCTTGGACTGA...CCCAGTCAAAGGTCTTTGCAGGACACTTTCTATCCTTGGAGTTGCAGAGGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp GACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCACCTGAGTTTGTACCTAGAATCCTAAGGTCCGCCTaGGATTATCGGTCAGACTCC +
Preference number: 4 (lower is better)
Translates to: DSRQAVGLFIRAPEFVPRILRSA*DYRSDS
Trigger: GGAGTCTGACCGATAATCTCAGGCGGACCTTAGGAT...TCTAGGTACAAACTCAGGTGCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GCCTCCTCTGCAACTCCAAGGATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGGAACTGAAAAGCATCTaGATAGCTGCCGAGGGTACA +
Preference number: 4 (lower is better)
Translates to: ASSATPRIESVLQRPLTGELKSI*IAAEGT
Trigger: TGTACCCTCGGCAGCTATGCAGATGCTTTTCAGTTC...CCCAGTCAAAGGTCTTTGCAGGACACTTTCTATCCTTGGAGTTGCAGAGGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp ACTGCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGAGTGAAGCCTGTGCCTaGGTGCCTCTTGGTCTTCAT +
Preference number: 4 (lower is better)
Translates to: TAEAVLSGLKASSGSLYKSEACA*VPLGLH
Trigger: ATGAAGACCAAGAGGCACGCAGGCACAGGCTTCACT...CTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCCAATCAGGCCTCCTCTaGAACTCCAAGGATAGAAAG +
Preference number: 4 (lower is better)
Translates to: AEAVLSGLKASSGSLYKGQSGLL*NSKDRK
Trigger: CTTTCTATCCTTGGAGTTGCAGAGGAGGCCTGATTG...GCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCACCTGAGTTTGTACCTAGATGCTGCCAGTCACTGTaGAGAAAGTCCAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: DSRQAVGLFIRAPEFVPRCCQSL*RKSSVQ
Trigger: CTGGACACTGGACTTTCTGCACAGTGACTGGCAGCA...TCTAGGTACAAACTCAGGTGCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GGGCACACGTCGCTCTCTGGTCACGGTTGCAAGATGGTCTGGAATTCTGCAGGTAGGTTGAATTTACTATaGTTTCTTCCCTTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: GHTSLSGHGCKMVWNSAGRLNLL*FLPFGH
Trigger: GTGGCCAAAGGGAAGAAAGCATAGTAAATTCAACCT...ACCTGCAGAATTCCAGACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TCAGAGAATAAAACTGTAGAACATAGGGTGAAGAAACGCAGGAGAGGTGAGGGTAGGGCTCTCCCGAGCTaGAGGCCCAAATTGGCATTC +
Preference number: 4 (lower is better)
Translates to: SENKTVEHRVKKRRRGEGRALPS*RPKLAF
Trigger: GAATGCCAATTTGGGCCTCCAGCTCGGGAGAGCCCT...ACCCTCACCTCTCCTGCGTTTCTTCACCCTATGTTCTACAGTTTTATTCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TCAGACTCCCATGAGGAACAGAGGTTGAATTTACTATGCTTTCTTCCCTTTGGCGGGCACTATGGGTACTaGCCAGCGGATGTAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SDSHEEQRLNLLCFLPFGGHYGY*PADVAG
Trigger: TCCAGCTACATCCGCTGGCCAGTACCCATAGTGCCC...GCCAAAGGGAAGAAAGCATAGTAAATTCAACCTCTGTTCCTCATGGGAGTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TCAGAGAATAAAACTGTAGAACATAGGGTGAAGAAACGCAGGAGAGGTGAGGGTGGAAGCGCGGGAAGTTaGCATGCAAGGGGCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SENKTVEHRVKKRRRGEGGSAGS*HARGFL
Trigger: AAGGAAGCCCCTTGCATGCCAACTTCCCGCGCTTCC...ACCCTCACCTCTCCTGCGTTTCTTCACCCTATGTTCTACAGTTTTATTCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp AATAGCAGGTCCCCTCGAAGAATAGCAGGTCCCCTTCTGGAATGCACTCTTGAGCACTTTCTTCCTCATTaGGACTCGGAGCAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: NSRSPRRIAGPLLECTLEHFLPH*DSEQKG
Trigger: TCCCTTTTGCTCCGAGTCCCAATGAGGAAGAAAGTG...CTCAAGAGTGCATTCCAGAAGGGGACCTGCTATTCTTCGAGGGGACCTGCTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CCA 90 bp GGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAACACTTTCTTCCTCATTaGGACTCGGAGCAAAAGGGA +
Preference number: 4 (lower is better)
Translates to: GQISEALGEVLVGQSENKHFLPH*DSEQKG
Trigger: TCCCTTTTGCTCCGAGTCCCAATGAGGAAGAAAGTG...TTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TCAGACTCCCATGAGGAACAGAGGTTGAATTTACTATGCTTTCTTCCCTTTGGCGCTTCCTCTGGTCCTTaGAGTGAAGCCTGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SDSHEEQRLNLLCFLPFGASSGP*SEACAC
Trigger: GCAGGCACAGGCTTCACTCCAAGGACCAGAGGAAGC...GCCAAAGGGAAGAAAGCATAGTAAATTCAACCTCTGTTCCTCATGGGAGTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TCAGAGAATAAAACTGTAGAACATAGGGTGAAGAAACGCAGGAGAGGTGAGGGTGCTTCCTCTGGTCCTTaGAGTGAAGCCTGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SENKTVEHRVKKRRRGEGASSGP*SEACAC
Trigger: GCAGGCACAGGCTTCACTCCAAGGACCAGAGGAAGC...ACCCTCACCTCTCCTGCGTTTCTTCACCCTATGTTCTACAGTTTTATTCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp CATTTCTGGATACCATCCTGCTCACCATCGATTATATCTAGCAACTGGCCTCAGCGTGGTAACCACTTGTaGGGCCAGAAGTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: HFWIPSCSPSIISSNWPQRGNHL*GQKSGM
Trigger: CATCCCAGACTTCTGGCCCCACAAGTGGTTACCACG...CTGAGGCCAGTTGCTAGATATAATCGATGGTGAGCAGGATGGTATCCAGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp CGGAACCCTAACTGGCTACCCTTTAGGCAACATCAAGGAAAGTTGTGGAGCCTGTGTAGAATGGTGAATTaGTGCCTGGAAGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: RNPNWLPFRQHQGKLWSLCRMVN*CLEGLP
Trigger: TGGAAGGCCTTCCAGGCACCAATTCACCATTCTACA...CAGGCTCCACAACTTTCCTTGATGTTGCCTAAAGGGTAGCCAGTTAGGGTTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp AGAATGATCGTTGCTGCTTCTTTCTCCTCCTCCTCTTCTTCCTCCTTCTCCTCTGGGCGTCTTCGAACTTaGCGTTGTCCTAAACGACCT +
Preference number: 4 (lower is better)
Translates to: RMIVAASFSSSSSSSFSSGRLRT*RCPKRP
Trigger: AGGTCGTTTAGGACAACGCCAAGTTCGAAGACGCCC...AGAGGAGAAGGAGGAAGAAGAGGAGGAGGAGAAAGAAGCAGCAACGATCATTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GGCAAATCTCCGTCAAGTTGTCCATTTGACATGTGGCTTTGCACACTCTCACTGGGGCGTCTTCGAACTTaGCGTTGTCCTAAACGACCT +
Preference number: 4 (lower is better)
Translates to: GKSPSSCPFDMWLCTLSLGRLRT*RCPKRP
Trigger: AGGTCGTTTAGGACAACGCCAAGTTCGAAGACGCCC...CAGTGAGAGTGTGCAAAGCCACATGTCAAATGGACAACTTGACGGAGATTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GGCAGGGTGATCTCAGCTTTGACAAGACATAGCAAGAACACACTAGAAAGGAAATTCTGGGTGGCCATCTaGCCCCAGCACTCAAACTCG +
Preference number: 4 (lower is better)
Translates to: GRVISALTRHSKNTLERKFWVAI*PQHSNS
Trigger: CGAGTTTGAGTGCTGGGGCCAGATGGCCACCCAGAA...TTTCCTTTCTAGTGTGTTCTTGCTATGTCTTGTCAAAGCTGAGATCACCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609883.1
CDS-3UTR CCA 90 bp TCAGAGAATAAAACTGTAGAACATAGGGTGAAGAAACGCAGGAGAGGTGAGGGTAAGAAGGGTGTGTTCTaGGTGGCCATCTGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: SENKTVEHRVKKRRRGEGKKGVF*VAIWPQ
Trigger: CTGGGGCCAGATGGCCACCCAGAACACACCCTTCTT...ACCCTCACCTCTCCTGCGTTTCTTCACCCTATGTTCTACAGTTTTATTCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp AGAATGATCGTTGCTGCTTCTTTCTCCTCCTCCTCTTCTTCCTCCTTCTCCTCTTTTGCACACTCTCACTaGGCTAGATGTCGGGTCCTC +
Preference number: 4 (lower is better)
Translates to: RMIVAASFSSSSSSSFSSFAHSH*ARCRVL
Trigger: GAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAAA...AGAGGAGAAGGAGGAAGAAGAGGAGGAGGAGAAAGAAGCAGCAACGATCATTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TCAGAGAATAAAACTGTAGAACATAGGGTGAAGAAACGCAGGAGAGGTGAGGGTGCAAAGACCTTTGACTaGGGGCTGCAGTCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SENKTVEHRVKKRRRGEGAKTFD*GLQSKA
Trigger: GGCCTTGGACTGCAGCCCCCAGTCAAAGGTCTTTGC...ACCCTCACCTCTCCTGCGTTTCTTCACCCTATGTTCTACAGTTTTATTCTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGGGCTGCAGTCCAAGGCCTGGAGCAGTGGATTTGGCTaGCATTTTATGGCCAAAACT +
Preference number: 4 (lower is better)
Translates to: DRKCPAKTFDWGLQSKAWSSGFG*HFMAKT
Trigger: AGTTTTGGCCATAAAATGCCAGCCAAATCCACTGCT...CCAGGCCTTGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGACACTTTCTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp ACTGCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGTGCTGAAGGGTCCCTaGAAGTGTGGGTTTAAGGCA +
Preference number: 4 (lower is better)
Translates to: TAEAVLSGLKASSGSLYKVLKGP*KCGFKA
Trigger: TGCCTTAAACCCACACTTCCAGGGACCCTTCAGCAC...CTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR TCA 90 bp AGAATGATCGTTGCTGCTTCTTTCTCCTCCTCCTCTTCTTCCTCCTTCTCCTCTCCTTGGCTTCGCCAGTaGAAAAGGAGATCAGAAAGG +
Preference number: 4 (lower is better)
Translates to: RMIVAASFSSSSSSSFSSPWLRQ*KRRSER
Trigger: CCTTTCTGATCTCCTTTTTCACTGGCGAAGCCAAGG...AGAGGAGAAGGAGGAAGAAGAGGAGGAGGAGAAAGAAGCAGCAACGATCATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp GAAAGCTTTAGCATACAGAGCAGCTTCTTATCTTCACAACACAGTAATGCAACAGGCTTCCTTCCTGGGTaGCCGAGATGGCCCAGTCCT +
Preference number: 4 (lower is better)
Translates to: ESFSIQSSFLSSQHSNATGFLPG*PRWPSP
Trigger: AGGACTGGGCCATCTCGGTCACCCAGGAAGGAAGCC...TGTTGCATTACTGTGTTGTGAAGATAAGAAGCTGCTCTGTATGCTAAAGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR TCA 90 bp CATTTCTGGATACCATCCTGCTCACCATCGATTATATCTAGCAACTGGCCTCAGTACAGTGGCCCTGCTTaGGCTTGCGAATGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: HFWIPSCSPSIISSNWPQYSGPA*ACEWPF
Trigger: AAAAGGCCATTCGCAAGCTCAAGCAGGGCCACTGTA...CTGAGGCCAGTTGCTAGATATAATCGATGGTGAGCAGGATGGTATCCAGAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp GGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAAGAGCAAAAGGGAAGATaGTATTTCGAACTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GQISEALGEVLVGQSENKEQKGR*YFELQG
Trigger: TCCCTGGAGTTCGAAATATCATCTTCCCTTTTGCTC...TTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAAAAGAATGGTGAATTGGTaGCTGGAAGGCCTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: GRSVRHWVKSWWVSQRIKRMVNW*LEGLPE
Trigger: TTCTGGAAGGCCTTCCAGGCACCAATTCACCATTCT...TTTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp CGGAACCCTAACTGGCTACCCTTTAGGCAACATCAAGGAAAGTTGTGGAGCCTGGATGGTCTGGAATTCTaGAGGTCTTCTTCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: RNPNWLPFRQHQGKLWSLDGLEF*RSSSGS
Trigger: AGAACCTGAAGAAGACCTGCAGAATTCCAGACCATC...CAGGCTCCACAACTTTCCTTGATGTTGCCTAAAGGGTAGCCAGTTAGGGTTCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp TCAGACTCCCATGAGGAACAGAGGTTGAATTTACTATGCTTTCTTCCCTTTGGCCTCTTCCAGGCCCTCTaGTGGAGGTGTGGCATGAAA +
Preference number: 4 (lower is better)
Translates to: SDSHEEQRLNLLCFLPFGLFQAL*WRCGMK
Trigger: TTTCATGCCACACCTCCAGCAGAGGGCCTGGAAGAG...GCCAAAGGGAAGAAAGCATAGTAAATTCAACCTCTGTTCCTCATGGGAGTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp TCAGACTCCCATGAGGAACAGAGGTTGAATTTACTATGCTTTCTTCCCTTTGGCTGGCTGCACTTGCTCTaGTGCCAGTCACTGTGCAGA +
Preference number: 4 (lower is better)
Translates to: SDSHEEQRLNLLCFLPFGWLHLL*CQSLCR
Trigger: TCTGCACAGTGACTGGCAGCAGAGCAAGTGCAGCCA...GCCAAAGGGAAGAAAGCATAGTAAATTCAACCTCTGTTCCTCATGGGAGTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GGCAGGGTGATCTCAGCTTTGACAAGACATAGCAAGAACACACTAGAAAGGAAAAACCCTGGCTGCACTTaGTCTGCTGCCAGTCACTGT +
Preference number: 4 (lower is better)
Translates to: GRVISALTRHSKNTLERKNPGCT*SAASHC
Trigger: ACAGTGACTGGCAGCAGAGCAAGTGCAGCCAGGGTT...TTTCCTTTCTAGTGTGTTCTTGCTATGTCTTGTCAAAGCTGAGATCACCCTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609883.1
CDS-3UTR CCA 90 bp GGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAAAGGGGTGCTGCGATCCTaGATCACGTTAATCAAAAGA +
Preference number: 4 (lower is better)
Translates to: GRSVRHWVKSWWVSQRIKGVLRS*ITLIKR
Trigger: TCTTTTGATTAACGTGATCCAGGATCGCAGCACCCC...TTTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCACCTGAGTTTGTACCTAGAAGGCCTTTGAGGAATTaGTTTTGGAGGCGGCAGTCA +
Preference number: 4 (lower is better)
Translates to: DSRQAVGLFIRAPEFVPRRPLRN*FWRRQS
Trigger: TGACTGCCGCCTCCAAAACCAATTCCTCAAAGGCCT...TCTAGGTACAAACTCAGGTGCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GGCAAATCTCCGTCAAGTTGTCCATTTGACATGTGGCTTTGCACACTCTCACTGTCTCCTTCTGGTTTCTaGCCCCCATCCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: GKSPSSCPFDMWLCTLSLSPSGF*PPSSSS
Trigger: TGAAGATGAGGATGGGGGCCAGAAACCAGAAGGAGA...CAGTGAGAGTGTGCAAAGCCACATGTCAAATGGACAACTTGACGGAGATTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GAAAGCTTTAGCATACAGAGCAGCTTCTTATCTTCACAACACAGTAATGCAACACCCTCCTTTCCCAGGTaGCCCTGGTTGGGCACACGT +
Preference number: 4 (lower is better)
Translates to: ESFSIQSSFLSSQHSNATPSFPR*PWLGTR
Trigger: ACGTGTGCCCAACCAGGGCCACCTGGGAAAGGAGGG...TGTTGCATTACTGTGTTGTGAAGATAAGAAGCTGCTCTGTATGCTAAAGCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CCA 90 bp GCCTCCTCTGCAACTCCAAGGATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGTGGGTGAAGTCCTGGTaGGTCAGTCAGAGAATAAAA +
Preference number: 4 (lower is better)
Translates to: ASSATPRIESVLQRPLTGWVKSW*VSQRIK
Trigger: TTTTATTCTCTGACTGACCCACCAGGACTTCACCCA...CCCAGTCAAAGGTCTTTGCAGGACACTTTCTATCCTTGGAGTTGCAGAGGAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAAACATTGGGTGAAGTCCTaGTGGGTCAGTCAGAGAATA +
Preference number: 4 (lower is better)
Translates to: GRSVRHWVKSWWVSQRIKHWVKS*WVSQRI
Trigger: TATTCTCTGACTGACCCACCAGGACTTCACCCAATG...TTTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GGCAAATCTCCGTCAAGTTGTCCATTTGACATGTGGCTTTGCACACTCTCACTGCCTCTGCTGGAGGTGTaGCATGAAATGAGTGTAGGA +
Preference number: 4 (lower is better)
Translates to: GKSPSSCPFDMWLCTLSLPLLEV*HEMSVG
Trigger: TCCTACACTCATTTCATGCCACACCTCCAGCAGAGG...CAGTGAGAGTGTGCAAAGCCACATGTCAAATGGACAACTTGACGGAGATTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
3UTR CAA 72 bp AGTCAGTCAAGGGCAAATCTCCGTCAAGTTGTCCATTaGACATGTGGCTTTGCACACTCTCACTGGGCTAGA +
Preference number: 4 (lower is better)
Translates to: SQSRANLRQVVH*TCGFAHSHWAR
Trigger: TCTAGCCCAGTGAGAGTGTGCAAAGCCACATGTCAAATGGACAACTTGACGGAGATTTGCCCTTGACTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp TCAGAGAATAAAACTGTAGAACATAGGGTGAAGAAACGCAGGAGAGGTGAGGGTGTAGACTGGGTCTCCTaGAAAGGGCTCTATCTCAGG +
Preference number: 4 (lower is better)
Translates to: SENKTVEHRVKKRRRGEGVDWVS*KGLYLR
Trigger: CCTGAGATAGAGCCCTTTTCAGGAGACCCAGTCTAC...ACCCTCACCTCTCCTGCGTTTCTTCACCCTATGTTCTACAGTTTTATTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp TCAGAGAATAAAACTGTAGAACATAGGGTGAAGAAACGCAGGAGAGGTGAGGGTCCTCATGGTCGGCTATaGAGGTCTCTAGCTGCATCA +
Preference number: 4 (lower is better)
Translates to: SENKTVEHRVKKRRRGEGPHGRL*RSLAAS
Trigger: TGATGCAGCTAGAGACCTTCATAGCCGACCATGAGG...ACCCTCACCTCTCCTGCGTTTCTTCACCCTATGTTCTACAGTTTTATTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp GGCAGGGTGATCTCAGCTTTGACAAGACATAGCAAGAACACACTAGAAAGGAAACCTCATGGTCGGCTATaGAGGTCTCTAGCTGCATCA +
Preference number: 4 (lower is better)
Translates to: GRVISALTRHSKNTLERKPHGRL*RSLAAS
Trigger: TGATGCAGCTAGAGACCTTCATAGCCGACCATGAGG...TTTCCTTTCTAGTGTGTTCTTGCTATGTCTTGTCAAAGCTGAGATCACCCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609883.1
CDS-3UTR TCA 90 bp GGCAAATCTCCGTCAAGTTGTCCATTTGACATGTGGCTTTGCACACTCTCACTGTCGGTCAGACTCCCATaGGGAACAGAGGTTGAATTT +
Preference number: 4 (lower is better)
Translates to: GKSPSSCPFDMWLCTLSLSVRLP*GTEVEF
Trigger: AAATTCAACCTCTGTTCCTCATGGGAGTCTGACCGA...CAGTGAGAGTGTGCAAAGCCACATGTCAAATGGACAACTTGACGGAGATTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp ACTGCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGATTATTCAGTATGCATaGCTGCACAGGTGGCAGCCA +
Preference number: 4 (lower is better)
Translates to: TAEAVLSGLKASSGSLYKIIQYA*LHRWQP
Trigger: TGGCTGCCACCTGTGCAGTCATGCATACTGAATAAT...CTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609883.1
CDS-3UTR GCA 90 bp GACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCACCTGAGTTTGTACCTAGAGAACTGAAAAGCATCTaGATAGCTGCCGAGGGTACA +
Preference number: 4 (lower is better)
Translates to: DSRQAVGLFIRAPEFVPRELKSI*IAAEGT
Trigger: TGTACCCTCGGCAGCTATGCAGATGCTTTTCAGTTC...TCTAGGTACAAACTCAGGTGCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp TGCAACAATAACACATGTATTCCAAAAGGGTTTCCTCCCGAGCCTCTGGGAGACCAGAATGATCGTTGCTaGTTCTTTCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: CNNNTCIPKGFPPEPLGDQNDRC*FFLLLL
Trigger: GAGGAGGAGGAGAAAGAAGCAGCAACGATCATTCTG...GTCTCCCAGAGGCTCGGGAGGAAACCCTTTTGGAATACATGTGTTATTGTTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR GCA 90 bp AGAATGATCGTTGCTGCTTCTTTCTCCTCCTCCTCTTCTTCCTCCTTCTCCTCTTGGCAGAATGATCGTTaGTGCTTCTTTCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RMIVAASFSSSSSSSFSSWQNDR*CFFLLL
Trigger: GAGGAGGAGAAAGAAGCAGCAACGATCATTCTGCCA...AGAGGAGAAGGAGGAAGAAGAGGAGGAGGAGAAAGAAGCAGCAACGATCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GGCAAATCTCCGTCAAGTTGTCCATTTGACATGTGGCTTTGCACACTCTCACTGTGGCAGAATGATCGTTaGTGCTTCTTTCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GKSPSSCPFDMWLCTLSLWQNDR*CFFLLL
Trigger: GAGGAGGAGAAAGAAGCAGCAACGATCATTCTGCCA...CAGTGAGAGTGTGCAAAGCCACATGTCAAATGGACAACTTGACGGAGATTTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GGCAGGGTGATCTCAGCTTTGACAAGACATAGCAAGAACACACTAGAAAGGAAATGCTGCCAGTCACTGTaGAGAAAGTCCAGTGTCCAG +
Preference number: 4 (lower is better)
Translates to: GRVISALTRHSKNTLERKCCQSL*RKSSVQ
Trigger: CTGGACACTGGACTTTCTGCACAGTGACTGGCAGCA...TTTCCTTTCTAGTGTGTTCTTGCTATGTCTTGTCAAAGCTGAGATCACCCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609883.1
CDS-3UTR CCA 90 bp CATTTCTGGATACCATCCTGCTCACCATCGATTATATCTAGCAACTGGCCTCAGTCTCCTTCTGGTTTCTaGCCCCCATCCTCATCTTCA +
Preference number: 4 (lower is better)
Translates to: HFWIPSCSPSIISSNWPQSPSGF*PPSSSS
Trigger: TGAAGATGAGGATGGGGGCCAGAAACCAGAAGGAGA...CTGAGGCCAGTTGCTAGATATAATCGATGGTGAGCAGGATGGTATCCAGAAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAAATGTCCATTTGACATGTaGCTTTGCACACTCTCACTG +
Preference number: 4 (lower is better)
Translates to: GRSVRHWVKSWWVSQRIKCPFDM*LCTLSL
Trigger: CAGTGAGAGTGTGCAAAGCCACATGTCAAATGGACA...TTTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAAAGCAGTGGATTTGGCTaGCATTTTATGGCCAAAACT +
Preference number: 4 (lower is better)
Translates to: GQISEALGEVLVGQSENKSSGFG*HFMAKT
Trigger: AGTTTTGGCCATAAAATGCCAGCCAAATCCACTGCT...TTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp ACTGCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGAGCAAAAGGGAAGATaGTATTTCGAACTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: TAEAVLSGLKASSGSLYKEQKGR*YFELQG
Trigger: TCCCTGGAGTTCGAAATATCATCTTCCCTTTTGCTC...CTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp ACTGCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGTCAAGTTGTCCATTTaGCATGTGGCTTTGCACACT +
Preference number: 4 (lower is better)
Translates to: TAEAVLSGLKASSGSLYKVKLSI*HVALHT
Trigger: AGTGTGCAAAGCCACATGTCAAATGGACAACTTGAC...CTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp ACTGCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGCATTTTAAATCCTGCTaGTCAAGAACTGGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: TAEAVLSGLKASSGSLYKHFKSC*SRTGRV
Trigger: CACCCTGCCAGTTCTTGATCAGCAGGATTTAAAATG...CTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609883.1
CDS-3UTR TCA 90 bp CGGAACCCTAACTGGCTACCCTTTAGGCAACATCAAGGAAAGTTGTGGAGCCTGGGAAAACCAGACAATTaGAAGGTCCAACAAATTAGG +
Preference number: 4 (lower is better)
Translates to: RNPNWLPFRQHQGKLWSLGKPDN*KVQQIR
Trigger: CCTAATTTGTTGGACCTTTCAATTGTCTGGTTTTCC...CAGGCTCCACAACTTTCCTTGATGTTGCCTAAAGGGTAGCCAGTTAGGGTTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609883.1
CDS-3UTR GCA 90 bp GCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCTTCTGGATACCATCCTaGTCACCATCGATTATATCT +
Preference number: 4 (lower is better)
Translates to: AEAVLSGLKASSGSLYKGFWIPS*SPSIIS
Trigger: AGATATAATCGATGGTGAGCAGGATGGTATCCAGAA...GCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCAGGTTGAATTTACTATaGTTTCTTCCCTTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: AEAVLSGLKASSGSLYKGRLNLL*FLPFGH
Trigger: GTGGCCAAAGGGAAGAAAGCATAGTAAATTCAACCT...GCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp AGAATGATCGTTGCTGCTTCTTTCTCCTCCTCCTCTTCTTCCTCCTTCTCCTCTGGTTGCAAGATGGTCTaGAATTCTGCAGGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RMIVAASFSSSSSSSFSSGCKMV*NSAGLL
Trigger: AAGAAGACCTGCAGAATTCCAGACCATCTTGCAACC...AGAGGAGAAGGAGGAAGAAGAGGAGGAGGAGAAAGAAGCAGCAACGATCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TCAGAGAATAAAACTGTAGAACATAGGGTGAAGAAACGCAGGAGAGGTGAGGGTCTCAAGTGCTGTAAGTaGAACCAGCCTGCACAGTCA +
Preference number: 4 (lower is better)
Translates to: SENKTVEHRVKKRRRGEGLKCCK*NQPAQS
Trigger: TGACTGTGCAGGCTGGTTCCACTTACAGCACTTGAG...ACCCTCACCTCTCCTGCGTTTCTTCACCCTATGTTCTACAGTTTTATTCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TCAGACTCCCATGAGGAACAGAGGTTGAATTTACTATGCTTTCTTCCCTTTGGCCTCCGGAACCCTAACTaGCTACCCTTTAGGCAACAT +
Preference number: 4 (lower is better)
Translates to: SDSHEEQRLNLLCFLPFGLRNPN*LPFRQH
Trigger: ATGTTGCCTAAAGGGTAGCCAGTTAGGGTTCCGGAG...GCCAAAGGGAAGAAAGCATAGTAAATTCAACCTCTGTTCCTCATGGGAGTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TCAGAGAATAAAACTGTAGAACATAGGGTGAAGAAACGCAGGAGAGGTGAGGGTCTCCGGAACCCTAACTaGCTACCCTTTAGGCAACAT +
Preference number: 4 (lower is better)
Translates to: SENKTVEHRVKKRRRGEGLRNPN*LPFRQH
Trigger: ATGTTGCCTAAAGGGTAGCCAGTTAGGGTTCCGGAG...ACCCTCACCTCTCCTGCGTTTCTTCACCCTATGTTCTACAGTTTTATTCTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAAAAGTCACTCTTTACAATaGCAGAATGATCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: GRSVRHWVKSWWVSQRIKSHSLQ*QNDRCC
Trigger: GCAGCAACGATCATTCTGCCATTGTAAAGAGTGACT...TTTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp TCAGACTCCCATGAGGAACAGAGGTTGAATTTACTATGCTTTCTTCCCTTTGGCAGAAGCAGTGCTTTCTaGACTCAAGGCAAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: SDSHEEQRLNLLCFLPFGRSSAF*TQGKQW
Trigger: CCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCT...GCCAAAGGGAAGAAAGCATAGTAAATTCAACCTCTGTTCCTCATGGGAGTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp TCAGAGAATAAAACTGTAGAACATAGGGTGAAGAAACGCAGGAGAGGTGAGGGTCTGTATTATGGGAGGTaGTGCACCCAGGAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: SENKTVEHRVKKRRRGEGLYYGR*CTQEVF
Trigger: GAAAACTTCCTGGGTGCATCACCTCCCATAATACAG...ACCCTCACCTCTCCTGCGTTTCTTCACCCTATGTTCTACAGTTTTATTCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp TCAGACTCCCATGAGGAACAGAGGTTGAATTTACTATGCTTTCTTCCCTTTGGCGCTGGAGGTGTGGCATaGAATGAGTGTAGGATTCTA +
Preference number: 4 (lower is better)
Translates to: SDSHEEQRLNLLCFLPFGAGGVA*NECRIL
Trigger: TAGAATCCTACACTCATTTCATGCCACACCTCCAGC...GCCAAAGGGAAGAAAGCATAGTAAATTCAACCTCTGTTCCTCATGGGAGTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp TCAGACTCCCATGAGGAACAGAGGTTGAATTTACTATGCTTTCTTCCCTTTGGCCAGAATGATCGTTGCTaGTTCTTTCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SDSHEEQRLNLLCFLPFGQNDRC*FFLLLL
Trigger: GAGGAGGAGGAGAAAGAAGCAGCAACGATCATTCTG...GCCAAAGGGAAGAAAGCATAGTAAATTCAACCTCTGTTCCTCATGGGAGTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp TCAGACTCCCATGAGGAACAGAGGTTGAATTTACTATGCTTTCTTCCCTTTGGCTCACTGCAGAAGCAGTaGTTTCTGGACTCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: SDSHEEQRLNLLCFLPFGSLQKQ*FLDSRQ
Trigger: TTGCCTTGAGTCCAGAAAGCACTGCTTCTGCAGTGA...GCCAAAGGGAAGAAAGCATAGTAAATTCAACCTCTGTTCCTCATGGGAGTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAAAATGAATTATTCAGTATaGATGACTGCACAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GRSVRHWVKSWWVSQRIKMNYSV*MTAQVA
Trigger: TGCCACCTGTGCAGTCATGCATACTGAATAATTCAT...TTTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000609883.1
CDS-3UTR CCA 90 bp GAAAGCTTTAGCATACAGAGCAGCTTCTTATCTTCACAACACAGTAATGCAACACGTGGTAACCACTTGTaGGGCCAGAAGTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: ESFSIQSSFLSSQHSNATRGNHL*GQKSGM
Trigger: CATCCCAGACTTCTGGCCCCACAAGTGGTTACCACG...TGTTGCATTACTGTGTTGTGAAGATAAGAAGCTGCTCTGTATGCTAAAGCTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR TCA 90 bp CATTTCTGGATACCATCCTGCTCACCATCGATTATATCTAGCAACTGGCCTCAGGGAAATACAAGAGGGTaGCCAGTTCATTTATGGGAA +
Preference number: 4 (lower is better)
Translates to: HFWIPSCSPSIISSNWPQGNTRG*PVHLWE
Trigger: TTCCCATAAATGAACTGGTCACCCTCTTGTATTTCC...CTGAGGCCAGTTGCTAGATATAATCGATGGTGAGCAGGATGGTATCCAGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR TCA 90 bp GACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCACCTGAGTTTGTACCTAGATTTACAATGGCAGAATaGTCGTTGCTGCTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: DSRQAVGLFIRAPEFVPRFTMAE*SLLLLS
Trigger: AGAAAGAAGCAGCAACGATCATTCTGCCATTGTAAA...TCTAGGTACAAACTCAGGTGCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GAAAGCTTTAGCATACAGAGCAGCTTCTTATCTTCACAACACAGTAATGCAACAGAAAGTTGTGGAGCCTaGAATGTTGGGCGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: ESFSIQSSFLSSQHSNATESCGA*NVGRCP
Trigger: TGGACAGCGCCCAACATTGCAGGCTCCACAACTTTC...TGTTGCATTACTGTGTTGTGAAGATAAGAAGCTGCTCTGTATGCTAAAGCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CCA 90 bp GAAAGCTTTAGCATACAGAGCAGCTTCTTATCTTCACAACACAGTAATGCAACAGTCCTGGTCAGCAAATaGGGCAGGTATGGCAGCAAT +
Preference number: 4 (lower is better)
Translates to: ESFSIQSSFLSSQHSNATVLVSK*GRYGSN
Trigger: ATTGCTGCCATACCTGCCCCATTTGCTGACCAGGAC...TGTTGCATTACTGTGTTGTGAAGATAAGAAGCTGCTCTGTATGCTAAAGCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR GCA 90 bp TCAGACTCCCATGAGGAACAGAGGTTGAATTTACTATGCTTTCTTCCCTTTGGCAAAGGTAAACTCAAGTaGTGTAAGTGGAACCAGCCT +
Preference number: 4 (lower is better)
Translates to: SDSHEEQRLNLLCFLPFGKGKLK*CKWNQP
Trigger: AGGCTGGTTCCACTTACAGCACTTGAGTTTACCTTT...GCCAAAGGGAAGAAAGCATAGTAAATTCAACCTCTGTTCCTCATGGGAGTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CCA 90 bp GAAAGCTTTAGCATACAGAGCAGCTTCTTATCTTCACAACACAGTAATGCAACACTCAAGTGCTGTAAGTaGAACCAGCCTGCACAGTCA +
Preference number: 4 (lower is better)
Translates to: ESFSIQSSFLSSQHSNATLKCCK*NQPAQS
Trigger: TGACTGTGCAGGCTGGTTCCACTTACAGCACTTGAG...TGTTGCATTACTGTGTTGTGAAGATAAGAAGCTGCTCTGTATGCTAAAGCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CCA 90 bp TCAGAGAATAAAACTGTAGAACATAGGGTGAAGAAACGCAGGAGAGGTGAGGGTAGTCACTCTTTACAATaGCAGAATGATCGTTGCTGC +
Preference number: 4 (lower is better)
Translates to: SENKTVEHRVKKRRRGEGSHSLQ*QNDRCC
Trigger: GCAGCAACGATCATTCTGCCATTGTAAAGAGTGACT...ACCCTCACCTCTCCTGCGTTTCTTCACCCTATGTTCTACAGTTTTATTCTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR GCA 90 bp GAAAGCTTTAGCATACAGAGCAGCTTCTTATCTTCACAACACAGTAATGCAACATCACTGCAGAAGCAGTaGTTTCTGGACTCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: ESFSIQSSFLSSQHSNATSLQKQ*FLDSRQ
Trigger: TTGCCTTGAGTCCAGAAAGCACTGCTTCTGCAGTGA...TGTTGCATTACTGTGTTGTGAAGATAAGAAGCTGCTCTGTATGCTAAAGCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CCA 90 bp CATTTCTGGATACCATCCTGCTCACCATCGATTATATCTAGCAACTGGCCTCAGCTCTTACAGCTCTTATaGCTGTTACATCACAACAAA +
Preference number: 4 (lower is better)
Translates to: HFWIPSCSPSIISSNWPQLLQLL*LLHHNK
Trigger: TTTGTTGTGATGTAACAGCCATAAGAGCTGTAAGAG...CTGAGGCCAGTTGCTAGATATAATCGATGGTGAGCAGGATGGTATCCAGAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS TCA 90 bp TTCGCGCAGGGCCACATTCGCCATGCGGAGGCTGTTGAGATTTCCTaGCGCCTCAGACATCTCGACAAGCCCAGGGGCCCTGGGGCTCCG +
Preference number: 5 (lower is better)
Translates to: FAQGHIRHAEAVEIS*RLRHLDKPRGPGAP
Trigger: CGGAGCCCCAGGGCCCCTGGGCTTGTCGAGATGTCTGAGGCGTCAGGAAATCTCAACAGCCTCCGCATGGCGAATGTGGCCCTGCGCGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp TTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGACCCAGGTGGCCCTGGTaGGGCACACGTCGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: LHTLTGLDVGSSSRPSAGPRWPW*GTRRSL
Trigger: CAGAGAGCGACGTGTGCCCAACCAGGGCCACCTGGG...TCCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS TCA 90 bp CCACCCGCTCGGCGCCCCCGGGGAAATGAACCTCATGGTCGGCTATaGAGGTCTCTAGCTGCATCAGGAATTCAGCCAGGTAGACTGGGT +
Preference number: 5 (lower is better)
Translates to: PPARRPRGNEPHGRL*RSLAASGIQPGRLG
Trigger: ACCCAGTCTACCTGGCTGAATTCCTGATGCAGCTAGAGACCTTCATAGCCGACCATGAGGTTCATTTCCCCGGGGGCGCCGAGCGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp TGCAACAATAACACATGTATTCCAAAAGGGTTTCCTCCCGAGCCTCTGGGAGACGCGGGGGCGGTTCCTTaGACGCGGGCGGAGGCAGCG +
Preference number: 5 (lower is better)
Translates to: CNNNTCIPKGFPPEPLGDAGAVP*TRAEAA
Trigger: CGCTGCCTCCGCCCGCGTCAAAGGAACCGCCCCCGC...GTCTCCCAGAGGCTCGGGAGGAAACCCTTTTGGAATACATGTGTTATTGTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CAA 90 bp TTTATGGGAACAGGCCCAGAAACTTGCTCTCCAGCTCGTGGCCGGACTGAGCAGCGGCGTGGTAACCACTaGTGGGGCCAGAAGTCTGGG +
Preference number: 5 (lower is better)
Translates to: FMGTGPETCSPARGRTEQRRGNH*WGQKSG
Trigger: CCCAGACTTCTGGCCCCACAAGTGGTTACCACGCCG...CTGCTCAGTCCGGCCACGAGCTGGAGAGCAAGTTTCTGGGCCTGTTCCCATAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp TTTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGAACAGGCCCAGAAACTaGCTCTCCAGCTCGTGGCCG +
Preference number: 5 (lower is better)
Translates to: FAHSHWARCRVLFQALCWNRPRN*LSSSWP
Trigger: CGGCCACGAGCTGGAGAGCAAGTTTCTGGGCCTGTT...CCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CCA 90 bp TCATCCAGGAAGCGCGGGAAGTTGGCATGCAAGGGGCTTCCTTCCTaGGTGACCGAGATGGCCCAGTCCTTGGCTTCGCCAGTGAAAAAG +
Preference number: 5 (lower is better)
Translates to: SSRKRGKLACKGLPS*VTEMAQSLASPVKK
Trigger: CTTTTTCACTGGCGAAGCCAAGGACTGGGCCATCTCGGTCACCCAGGAAGGAAGCCCCTTGCATGCCAACTTCCCGCGCTTCCTGGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp TTTATGGGAACAGGCCCAGAAACTTGCTCTCCAGCTCGTGGCCGGACTGAGCAGAGCTGGAGGCCCAAATaGGCATTCTCCCCGCGAAGG +
Preference number: 5 (lower is better)
Translates to: FMGTGPETCSPARGRTEQSWRPK*AFSPRR
Trigger: CCTTCGCGGGGAGAATGCCAATTTGGGCCTCCAGCT...CTGCTCAGTCCGGCCACGAGCTGGAGAGCAAGTTTCTGGGCCTGTTCCCATAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp ATGGGCCCTCTCTCTGTCTGTCCCAGAAGGAATGGCCAATCAGGCCTCCTCTGCGGGAGCGGGATAGGCTaGGGAACGCGCACTTTTCTT +
Preference number: 5 (lower is better)
Translates to: MGPLSVCPRRNGQSGLLCGSGIG*GTRTFL
Trigger: AAGAAAAGTGCGCGTTCCCAAGCCTATCCCGCTCCC...GCAGAGGAGGCCTGATTGGCCATTCCTTCTGGGACAGACAGAGAGAGGGCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp GGGCACACGTCGCTCTCTGGTCACGGTTGCAAGATGGTCTGGAATTCTGCAGGTAACAGGCCCAGAAACTaGCTCTCCAGCTCGTGGCCG +
Preference number: 5 (lower is better)
Translates to: GHTSLSGHGCKMVWNSAGNRPRN*LSSSWP
Trigger: CGGCCACGAGCTGGAGAGCAAGTTTCTGGGCCTGTT...ACCTGCAGAATTCCAGACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp TTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGAAAACCCTGGCTGCACTaGCTCTGCTGCCAGTCACTG +
Preference number: 5 (lower is better)
Translates to: LHTLTGLDVGSSSRPSAGKPWLH*LCCQSL
Trigger: CAGTGACTGGCAGCAGAGCAAGTGCAGCCAGGGTTT...TCCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CCA 90 bp CGCGAACTCCAAGTTCTCCTCCGCAAGGACGGGCACTATGGGTACTaGCCAGCGGATGTAGCTGGAGACATTGCCCCGCAAGGAATTAAC +
Preference number: 5 (lower is better)
Translates to: RELQVLLRKDGHYGY*PADVAGDIAPQGIN
Trigger: GTTAATTCCTTGCGGGGCAATGTCTCCAGCTACATCCGCTGGCCAGTACCCATAGTGCCCGTCCTTGCGGAGGAGAACTTGGAGTTCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CCA 90 bp TGGGAGGTGATGCACCCAGGAAGTTTTCGGCGTGGTAACCACTTGTaGGGCCAGAAGTCTGGGATGACGCGTGAACAAAGGTCGGCTCCA +
Preference number: 5 (lower is better)
Translates to: WEVMHPGSFRRGNHL*GQKSGMTREQRSAP
Trigger: TGGAGCCGACCTTTGTTCACGCGTCATCCCAGACTTCTGGCCCCACAAGTGGTTACCACGCCGAAAACTTCCTGGGTGCATCACCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp GTGCTGAAGGGTCCCTGGAAGTGTGGGTTTAAGGCACCCGTCCTTCACACTTCTAGGAAGCGCGGGAAGTaGGCATGCAAGGGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: VLKGPWKCGFKAPVLHTSRKRGK*ACKGLP
Trigger: AGGAAGCCCCTTGCATGCCAACTTCCCGCGCTTCCT...AGAAGTGTGAAGGACGGGTGCCTTAAACCCACACTTCCAGGGACCCTTCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CAA 90 bp TCTTGCTCATTGGGGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGAGCCTCTGGGAGACCTaGGGCTGCCTTCATACCCCT +
Preference number: 5 (lower is better)
Translates to: SCSLGQISEALGEVLVGQSLWET*GCLHTP
Trigger: AGGGGTATGAAGGCAGCCCAAGGTCTCCCAGAGGCT...CTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCCCCAATGAGCAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS GCA 90 bp CAGAATTCCTTACGGATTTCATCCAGGAAGCGCGGGAAGTTGGCATaGAAGGGGCTTCCTTCCTGGGTGACCGAGATGGCCCAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: QNSLRISSRKRGKLA*KGLPSWVTEMAQSL
Trigger: CAAGGACTGGGCCATCTCGGTCACCCAGGAAGGAAGCCCCTTGCATGCCAACTTCCCGCGCTTCCTGGATGAAATCCGTAAGGAATTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp GATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGGGCTGCAGTCCAAGGCCTGGGCCATGCGGAGGCTGTaGAGATTTCCTGACGCCTCA +
Preference number: 5 (lower is better)
Translates to: DRKCPAKTFDWGLQSKAWAMRRL*RFPDAS
Trigger: TGAGGCGTCAGGAAATCTCAACAGCCTCCGCATGGC...CCAGGCCTTGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGACACTTTCTATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp TTTATGGGAACAGGCCCAGAAACTTGCTCTCCAGCTCGTGGCCGGACTGAGCAGCCAAGAGGGCAGCTATaGCTGATCCCTCCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: FMGTGPETCSPARGRTEQPRGQL*LIPPFP
Trigger: TGGGAAAGGAGGGATCAGCAATAGCTGCCCTCTTGG...CTGCTCAGTCCGGCCACGAGCTGGAGAGCAAGTTTCTGGGCCTGTTCCCATAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS TCA 90 bp GACTCGATTCTGGTTCCTCCGTCTGCTAGGCTGTATTATGGGAGGTaGTGCACCCAGGAAGTTTTCGGCGTGGTAACCACTTGTGGGGCC +
Preference number: 5 (lower is better)
Translates to: DSILVPPSARLYYGR*CTQEVFGVVTTCGA
Trigger: GGCCCCACAAGTGGTTACCACGCCGAAAACTTCCTGGGTGCATCACCTCCCATAATACAGCCTAGCAGACGGAGGAACCAGAATCGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp GCCGGACTGAGCAGAGTACATGCCAAGAGGGCAGCTATTGCTGATCCCTCCTTTGTACAGTGGCCCTGCTaGAGCTTGCGAATGGCCTTT +
Preference number: 5 (lower is better)
Translates to: AGLSRVHAKRAAIADPSFVQWPC*SLRMAF
Trigger: AAAGGCCATTCGCAAGCTCAAGCAGGGCCACTGTAC...AAAGGAGGGATCAGCAATAGCTGCCCTCTTGGCATGTACTCTGCTCAGTCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp TTTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGTTTGAGGAATTGGTTTaGGAGGCGGCAGTCATCCCA +
Preference number: 5 (lower is better)
Translates to: FAHSHWARCRVLFQALCWFEELV*EAAVIP
Trigger: TGGGATGACTGCCGCCTCCAAAACCAATTCCTCAAA...CCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp TTGCACACTCTCACTGGGCTAGATGTCGGGTCCTCTTCCAGGCCCTCTGCTGGACCTTCCTCCTCATTCTaGTTCCTTATCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LHTLTGLDVGSSSRPSAGPSSSF*FLISSS
Trigger: GGAGGAGGAGATAAGGAACAAGAATGAGGAGGAAGG...TCCAGCAGAGGGCCTGGAAGAGGACCCGACATCTAGCCCAGTGAGAGTGTGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp GCCGGACTGAGCAGAGTACATGCCAAGAGGGCAGCTATTGCTGATCCCTCCTTTCAGATCAGTGAGGCATaGGGTGAAGTCCTGGTGGGT +
Preference number: 5 (lower is better)
Translates to: AGLSRVHAKRAAIADPSFQISEA*GEVLVG
Trigger: ACCCACCAGGACTTCACCCAATGCCTCACTGATCTG...AAAGGAGGGATCAGCAATAGCTGCCCTCTTGGCATGTACTCTGCTCAGTCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CCA 90 bp CCTTCATCTCTTGCTGAAAAGCCCTCATGCGCTTCCTCTGGTCCTTaGAGTGAAGCCTGTGCCTGCGTGCCTCTTGGTCTTCATCTTCAC +
Preference number: 5 (lower is better)
Translates to: PSSLAEKPSCASSGP*SEACACVPLGLHLH
Trigger: GTGAAGATGAAGACCAAGAGGCACGCAGGCACAGGCTTCACTCCAAGGACCAGAGGAAGCGCATGAGGGCTTTTCAGCAAGAGATGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp GTCCCTGGAAGTGTGGGTTTAAGGCACCCGTCCTTCACACTTCTCCACAGGGACTTTGAGGAATTGGTTTaGGAGGCGGCAGTCATCCCA +
Preference number: 5 (lower is better)
Translates to: VPGSVGLRHPSFTLLHRDFEELV*EAAVIP
Trigger: TGGGATGACTGCCGCCTCCAAAACCAATTCCTCAAA...GTCCCTGTGGAGAAGTGTGAAGGACGGGTGCCTTAAACCCACACTTCCAGGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CAA 90 bp GGGCACACGTCGCTCTCTGGTCACGGTTGCAAGATGGTCTGGAATTCTGCAGGTGACCATAAGAGCTCTTaGCGGAAGAATTCCGACAGG +
Preference number: 5 (lower is better)
Translates to: GHTSLSGHGCKMVWNSAGDHKSS*RKNSDR
Trigger: CCTGTCGGAATTCTTCCGCAAAGAGCTCTTATGGTC...ACCTGCAGAATTCCAGACCATCTTGCAACCGTGACCAGAGAGCGACGTGTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp GTCCCTGGAAGTGTGGGTTTAAGGCACCCGTCCTTCACACTTCTCCACAGGGACCTTCTCCTTCATCTCTaGCTGAAAAGCCCTCATGCG +
Preference number: 5 (lower is better)
Translates to: VPGSVGLRHPSFTLLHRDLLLHL*LKSPHA
Trigger: CGCATGAGGGCTTTTCAGCAAGAGATGAAGGAGAAG...GTCCCTGTGGAGAAGTGTGAAGGACGGGTGCCTTAAACCCACACTTCCAGGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CAA 90 bp ACTGCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGCGGCGTGGTAACCACTaGTGGGGCCAGAAGTCTGGG +
Preference number: 5 (lower is better)
Translates to: TAEAVLSGLKASSGSLYKRRGNH*WGQKSG
Trigger: CCCAGACTTCTGGCCCCACAAGTGGTTACCACGCCG...CTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp GCCGGACTGAGCAGAGTACATGCCAAGAGGGCAGCTATTGCTGATCCCTCCTTTGCTCTCTGGTCACGGTaGCAAGATGGTCTGGAATTC +
Preference number: 5 (lower is better)
Translates to: AGLSRVHAKRAAIADPSFALWSR*QDGLEF
Trigger: GAATTCCAGACCATCTTGCAACCGTGACCAGAGAGC...AAAGGAGGGATCAGCAATAGCTGCCCTCTTGGCATGTACTCTGCTCAGTCCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp GATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGGGCTGCAGTCCAAGGCCTGGTATGCTTTCTTCCCTTaGGCCACAAACCCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: DRKCPAKTFDWGLQSKAWYAFFP*ATNPGC
Trigger: GCAGCCAGGGTTTGTGGCCAAAGGGAAGAAAGCATA...CCAGGCCTTGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGACACTTTCTATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp GCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCTGGCCCTGCTTGAGCTaGCGAATGGCCTTTTTAGCC +
Preference number: 5 (lower is better)
Translates to: AEAVLSGLKASSGSLYKGWPCLS*RMAFLA
Trigger: GGCTAAAAAGGCCATTCGCAAGCTCAAGCAGGGCCA...GCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp CACCCCTCTTTCAACCCAAGAAAGCTCCCAAAGCCCACAGTTCCTCTTACAGCTGTACAGTGGCCCTGCTaGAGCTTGCGAATGGCCTTT +
Preference number: 5 (lower is better)
Translates to: HPSFNPRKLPKPTVPLTAVQWPC*SLRMAF
Trigger: AAAGGCCATTCGCAAGCTCAAGCAGGGCCACTGTAC...AGCTGTAAGAGGAACTGTGGGCTTTGGGAGCTTTCTTGGGTTGAAAGAGGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CAA 90 bp GCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCCAGGCCTTTGAGGAATaGGTTTTGGAGGCGGCAGTC +
Preference number: 5 (lower is better)
Translates to: AEAVLSGLKASSGSLYKGQAFEE*VLEAAV
Trigger: GACTGCCGCCTCCAAAACCAATTCCTCAAAGGCCTG...GCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp GATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGGGCTGCAGTCCAAGGCCTGGTCACTTTCTTCCTCATaGGGACTCGGAGCAAAAGGG +
Preference number: 5 (lower is better)
Translates to: DRKCPAKTFDWGLQSKAWSLSSS*GLGAKG
Trigger: CCCTTTTGCTCCGAGTCCCAATGAGGAAGAAAGTGA...CCAGGCCTTGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGACACTTTCTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp GATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGGGCTGCAGTCCAAGGCCTGGCTTCTCCTTCATCTCTaGCTGAAAAGCCCTCATGCG +
Preference number: 5 (lower is better)
Translates to: DRKCPAKTFDWGLQSKAWLLLHL*LKSPHA
Trigger: CGCATGAGGGCTTTTCAGCAAGAGATGAAGGAGAAG...CCAGGCCTTGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGACACTTTCTATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp GCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCCCAAGAGGGCAGCTATaGCTGATCCCTCCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: AEAVLSGLKASSGSLYKGPRGQL*LIPPFP
Trigger: TGGGAAAGGAGGGATCAGCAATAGCTGCCCTCTTGG...GCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS GCA 90 bp CCTCATGCGCTTCCTCTGGTCCTTGGAGTGAAGCCTGTGCCTGCGTaGCTCTTGGTCTTCATCTTCACTGTAGTACTCTTCATCTTCACT +
Preference number: 5 (lower is better)
Translates to: PHALPLVLGVKPVPA*LLVFIFTVVLFIFT
Trigger: AGTGAAGATGAAGAGTACTACAGTGAAGATGAAGACCAAGAGGCACGCAGGCACAGGCTTCACTCCAAGGACCAGAGGAAGCGCATGAGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS GCA 90 bp AAGCCCTCATGCGCTTCCTCTGGTCCTTGGAGTGAAGCCTGTGCCTaGGTGCCTCTTGGTCTTCATCTTCACTGTAGTACTCTTCATCTT +
Preference number: 5 (lower is better)
Translates to: KPSCASSGPWSEACA*VPLGLHLHCSTLHL
Trigger: AAGATGAAGAGTACTACAGTGAAGATGAAGACCAAGAGGCACGCAGGCACAGGCTTCACTCCAAGGACCAGAGGAAGCGCATGAGGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp ACTGCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGCCATGCGGAGGCTGTaGAGATTTCCTGACGCCTCA +
Preference number: 5 (lower is better)
Translates to: TAEAVLSGLKASSGSLYKAMRRL*RFPDAS
Trigger: TGAGGCGTCAGGAAATCTCAACAGCCTCCGCATGGC...CTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp CATTTCTGGATACCATCCTGCTCACCATCGATTATATCTAGCAACTGGCCTCAGAGGAAGCGCGGGAAGTaGGCATGCAAGGGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: HFWIPSCSPSIISSNWPQRKRGK*ACKGLP
Trigger: AGGAAGCCCCTTGCATGCCAACTTCCCGCGCTTCCT...CTGAGGCCAGTTGCTAGATATAATCGATGGTGAGCAGGATGGTATCCAGAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp ACTGCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGGAGCGGGATAGGCTaGGGAACGCGCACTTTTCTT +
Preference number: 5 (lower is better)
Translates to: TAEAVLSGLKASSGSLYKGSGIG*GTRTFL
Trigger: AAGAAAAGTGCGCGTTCCCAAGCCTATCCCGCTCCC...CTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp GACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCACCTGAGTTTGTACCTAGAGTCCTGCAAAGACCTTaGACTGGGGGCTGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: DSRQAVGLFIRAPEFVPRVLQRP*TGGCSP
Trigger: TGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGAC...TCTAGGTACAAACTCAGGTGCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp ACTGCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGTCCTGCAAAGACCTTaGACTGGGGGCTGCAGTCCA +
Preference number: 5 (lower is better)
Translates to: TAEAVLSGLKASSGSLYKVLQRP*TGGCSP
Trigger: TGGACTGCAGCCCCCAGTCAAAGGTCTTTGCAGGAC...CTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp ACTGCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGAAACCCTGGCTGCACTaGCTCTGCTGCCAGTCACTG +
Preference number: 5 (lower is better)
Translates to: TAEAVLSGLKASSGSLYKKPWLH*LCCQSL
Trigger: CAGTGACTGGCAGCAGAGCAAGTGCAGCCAGGGTTT...CTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CCA 90 bp CATAAGAGCTCTTTGCGGAAGAATTCCGACAGGCCTTTGAGGAATTaGTTTTGGAGGCGGCAGTCATCCCAAGACAAGAATTGGGCCAGG +
Preference number: 5 (lower is better)
Translates to: HKSSLRKNSDRPLRN*FWRRQSSQDKNWAR
Trigger: CCTGGCCCAATTCTTGTCTTGGGATGACTGCCGCCTCCAAAACCAATTCCTCAAAGGCCTGTCGGAATTCTTCCGCAAAGAGCTCTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp TCAGAGAATAAAACTGTAGAACATAGGGTGAAGAAACGCAGGAGAGGTGAGGGTAGCTGGAGGCCCAAATaGGCATTCTCCCCGCGAAGG +
Preference number: 5 (lower is better)
Translates to: SENKTVEHRVKKRRRGEGSWRPK*AFSPRR
Trigger: CCTTCGCGGGGAGAATGCCAATTTGGGCCTCCAGCT...ACCCTCACCTCTCCTGCGTTTCTTCACCCTATGTTCTACAGTTTTATTCTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp GACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCACCTGAGTTTGTACCTAGAGAGATGGCCCAGTCCTaGGCTTCGCCAGTGAAAAAG +
Preference number: 5 (lower is better)
Translates to: DSRQAVGLFIRAPEFVPREMAQS*ASPVKK
Trigger: CTTTTTCACTGGCGAAGCCAAGGACTGGGCCATCTC...TCTAGGTACAAACTCAGGTGCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp GGCAAATCTCCGTCAAGTTGTCCATTTGACATGTGGCTTTGCACACTCTCACTGTGGCCCTGCTTGAGCTaGCGAATGGCCTTTTTAGCC +
Preference number: 5 (lower is better)
Translates to: GKSPSSCPFDMWLCTLSLWPCLS*RMAFLA
Trigger: GGCTAAAAAGGCCATTCGCAAGCTCAAGCAGGGCCA...CAGTGAGAGTGTGCAAAGCCACATGTCAAATGGACAACTTGACGGAGATTTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp AGAATGATCGTTGCTGCTTCTTTCTCCTCCTCCTCTTCTTCCTCCTTCTCCTCTCAGATCAGTGAGGCATaGGGTGAAGTCCTGGTGGGT +
Preference number: 5 (lower is better)
Translates to: RMIVAASFSSSSSSSFSSQISEA*GEVLVG
Trigger: ACCCACCAGGACTTCACCCAATGCCTCACTGATCTG...AGAGGAGAAGGAGGAAGAAGAGGAGGAGGAGAAAGAAGCAGCAACGATCATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp CATTTCTGGATACCATCCTGCTCACCATCGATTATATCTAGCAACTGGCCTCAGCAGGCCTTTGAGGAATaGGTTTTGGAGGCGGCAGTC +
Preference number: 5 (lower is better)
Translates to: HFWIPSCSPSIISSNWPQQAFEE*VLEAAV
Trigger: GACTGCCGCCTCCAAAACCAATTCCTCAAAGGCCTG...CTGAGGCCAGTTGCTAGATATAATCGATGGTGAGCAGGATGGTATCCAGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp GGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAAAGACCATAAGAGCTCTTaGCGGAAGAATTCCGACAGG +
Preference number: 5 (lower is better)
Translates to: GRSVRHWVKSWWVSQRIKDHKSS*RKNSDR
Trigger: CCTGTCGGAATTCTTCCGCAAAGAGCTCTTATGGTC...TTTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp GCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCCGTCAAGTTGTCCATTaGACATGTGGCTTTGCACAC +
Preference number: 5 (lower is better)
Translates to: AEAVLSGLKASSGSLYKGRQVVH*TCGFAH
Trigger: GTGTGCAAAGCCACATGTCAAATGGACAACTTGACG...GCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp CGGAACCCTAACTGGCTACCCTTTAGGCAACATCAAGGAAAGTTGTGGAGCCTGCAACATCAAGGAAAGTaGTGGAGCCTGCAATGTTGG +
Preference number: 5 (lower is better)
Translates to: RNPNWLPFRQHQGKLWSLQHQGK*WSLQCW
Trigger: CCAACATTGCAGGCTCCACAACTTTCCTTGATGTTG...CAGGCTCCACAACTTTCCTTGATGTTGCCTAAAGGGTAGCCAGTTAGGGTTCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp GCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCCAACATCAAGGAAAGTaGTGGAGCCTGCAATGTTGG +
Preference number: 5 (lower is better)
Translates to: AEAVLSGLKASSGSLYKGQHQGK*WSLQCW
Trigger: CCAACATTGCAGGCTCCACAACTTTCCTTGATGTTG...GCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp GGCAGATCAGTGAGGCATTGGGTGAAGTCCTGGTGGGTCAGTCAGAGAATAAAAAAGGGTTCCTTGAAATaGAAGGGAGCTCAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: GRSVRHWVKSWWVSQRIKKGSLK*KGAQSR
Trigger: CCTGCTCTGAGCTCCCTTCAATTTCAAGGAACCCTT...TTTTATTCTCTGACTGACCCACCAGGACTTCACCCAATGCCTCACTGATCTGCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp ACTGCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGAGGCCAGCAGTGGATTaGGCTGGCATTTTATGGCCA +
Preference number: 5 (lower is better)
Translates to: TAEAVLSGLKASSGSLYKRPAVD*AGILWP
Trigger: TGGCCATAAAATGCCAGCCAAATCCACTGCTGGCCT...CTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp ATGGGCCCTCTCTCTGTCTGTCCCAGAAGGAATGGCCAATCAGGCCTCCTCTGCCATGAGGAACAGAGGTaGAATTTACTATGCTTTCTT +
Preference number: 5 (lower is better)
Translates to: MGPLSVCPRRNGQSGLLCHEEQR*NLLCFL
Trigger: AAGAAAGCATAGTAAATTCAACCTCTGTTCCTCATG...GCAGAGGAGGCCTGATTGGCCATTCCTTCTGGGACAGACAGAGAGAGGGCCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp GACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCACCTGAGTTTGTACCTAGAGGTCGGCCATTTCTGTaGACCATAAGAGCTCTTTGC +
Preference number: 5 (lower is better)
Translates to: DSRQAVGLFIRAPEFVPRGRPFL*TIRALC
Trigger: GCAAAGAGCTCTTATGGTCAACAGAAATGGCCGACC...TCTAGGTACAAACTCAGGTGCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp ACTGCAGAAGCAGTGCTTTCTGGACTCAAGGCAAGCAGTGGGTCTCTTTATAAGAAGGGTTCCTTGAAATaGAAGGGAGCTCAGAGCAGG +
Preference number: 5 (lower is better)
Translates to: TAEAVLSGLKASSGSLYKKGSLK*KGAQSR
Trigger: CCTGCTCTGAGCTCCCTTCAATTTCAAGGAACCCTT...CTTATAAAGAGACCCACTGCTTGCCTTGAGTCCAGAAAGCACTGCTTCTGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp GCCTCCTCTGCAACTCCAAGGATAGAAAGTGTCCTGCAAAGACCTTTGACTGGGAGAACTAAGGGTTCCTaGAAATTGAAGGGAGCTCAG +
Preference number: 5 (lower is better)
Translates to: ASSATPRIESVLQRPLTGRTKGS*KLKGAQ
Trigger: CTGAGCTCCCTTCAATTTCAAGGAACCCTTAGTTCT...CCCAGTCAAAGGTCTTTGCAGGACACTTTCTATCCTTGGAGTTGCAGAGGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS TCA 90 bp CTGTTGACCATAAGAGCTCTTTGCGGAAGAATTCCGACAGGCCTTTaGGGAATTGGTTTTGGAGGCGGCAGTCATCCCAAGACAAGAATT +
Preference number: 5 (lower is better)
Translates to: LLTIRALCGRIPTGL*GIGFGGGSHPKTRI
Trigger: AATTCTTGTCTTGGGATGACTGCCGCCTCCAAAACCAATTCCTCAAAGGCCTGTCGGAATTCTTCCGCAAAGAGCTCTTATGGTCAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp CATTTCTGGATACCATCCTGCTCACCATCGATTATATCTAGCAACTGGCCTCAGCCTTCCTCCTCATTCTaGTTCCTTATCTCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: HFWIPSCSPSIISSNWPQPSSSF*FLISSS
Trigger: GGAGGAGGAGATAAGGAACAAGAATGAGGAGGAAGG...CTGAGGCCAGTTGCTAGATATAATCGATGGTGAGCAGGATGGTATCCAGAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp TCAGAGAATAAAACTGTAGAACATAGGGTGAAGAAACGCAGGAGAGGTGAGGGTGCTCTCTGGTCACGGTaGCAAGATGGTCTGGAATTC +
Preference number: 5 (lower is better)
Translates to: SENKTVEHRVKKRRRGEGALWSR*QDGLEF
Trigger: GAATTCCAGACCATCTTGCAACCGTGACCAGAGAGC...ACCCTCACCTCTCCTGCGTTTCTTCACCCTATGTTCTACAGTTTTATTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp TCAGAGAATAAAACTGTAGAACATAGGGTGAAGAAACGCAGGAGAGGTGAGGGTAGGCCAGCAGTGGATTaGGCTGGCATTTTATGGCCA +
Preference number: 5 (lower is better)
Translates to: SENKTVEHRVKKRRRGEGRPAVD*AGILWP
Trigger: TGGCCATAAAATGCCAGCCAAATCCACTGCTGGCCT...ACCCTCACCTCTCCTGCGTTTCTTCACCCTATGTTCTACAGTTTTATTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp TCAGAGAATAAAACTGTAGAACATAGGGTGAAGAAACGCAGGAGAGGTGAGGGTTATGCTTTCTTCCCTTaGGCCACAAACCCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: SENKTVEHRVKKRRRGEGYAFFP*ATNPGC
Trigger: GCAGCCAGGGTTTGTGGCCAAAGGGAAGAAAGCATA...ACCCTCACCTCTCCTGCGTTTCTTCACCCTATGTTCTACAGTTTTATTCTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp TCAGACTCCCATGAGGAACAGAGGTTGAATTTACTATGCTTTCTTCCCTTTGGCGGTCGGCCATTTCTGTaGACCATAAGAGCTCTTTGC +
Preference number: 5 (lower is better)
Translates to: SDSHEEQRLNLLCFLPFGGRPFL*TIRALC
Trigger: GCAAAGAGCTCTTATGGTCAACAGAAATGGCCGACC...GCCAAAGGGAAGAAAGCATAGTAAATTCAACCTCTGTTCCTCATGGGAGTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp TCAGACTCCCATGAGGAACAGAGGTTGAATTTACTATGCTTTCTTCCCTTTGGCTCACTTTCTTCCTCATaGGGACTCGGAGCAAAAGGG +
Preference number: 5 (lower is better)
Translates to: SDSHEEQRLNLLCFLPFGSLSSS*GLGAKG
Trigger: CCCTTTTGCTCCGAGTCCCAATGAGGAAGAAAGTGA...GCCAAAGGGAAGAAAGCATAGTAAATTCAACCTCTGTTCCTCATGGGAGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp AGAATGATCGTTGCTGCTTCTTTCTCCTCCTCCTCTTCTTCCTCCTTCTCCTCTAGAACTAAGGGTTCCTaGAAATTGAAGGGAGCTCAG +
Preference number: 5 (lower is better)
Translates to: RMIVAASFSSSSSSSFSSRTKGS*KLKGAQ
Trigger: CTGAGCTCCCTTCAATTTCAAGGAACCCTTAGTTCT...AGAGGAGAAGGAGGAAGAAGAGGAGGAGGAGAAAGAAGCAGCAACGATCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp AGAATGATCGTTGCTGCTTCTTTCTCCTCCTCCTCTTCTTCCTCCTTCTCCTCTAGGGTGATCTCAGCTTaGACAAGACATAGCAAGAAC +
Preference number: 5 (lower is better)
Translates to: RMIVAASFSSSSSSSFSSRVISA*TRHSKN
Trigger: GTTCTTGCTATGTCTTGTCAAAGCTGAGATCACCCT...AGAGGAGAAGGAGGAAGAAGAGGAGGAGGAGAAAGAAGCAGCAACGATCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000609883.1
CDS-3UTR CAA 90 bp CGGAACCCTAACTGGCTACCCTTTAGGCAACATCAAGGAAAGTTGTGGAGCCTGATTTTCTTTACAAAGTaGTTTACTCCTGCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: RNPNWLPFRQHQGKLWSLIFFTK*FTPALV
Trigger: CACCAGGGCAGGAGTAAACAACTTTGTAAAGAAAAT...CAGGCTCCACAACTTTCCTTGATGTTGCCTAAAGGGTAGCCAGTTAGGGTTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000609883.1
CDS-3UTR CAA 90 bp TCAGAGAATAAAACTGTAGAACATAGGGTGAAGAAACGCAGGAGAGGTGAGGGTAATTCCGACAGGCCTTaGAGGAATTGGTTTTGGAGG +
Preference number: 5 (lower is better)
Translates to: SENKTVEHRVKKRRRGEGNSDRP*RNWFWR
Trigger: CCTCCAAAACCAATTCCTCAAAGGCCTGTCGGAATT...ACCCTCACCTCTCCTGCGTTTCTTCACCCTATGTTCTACAGTTTTATTCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp TCAGACTCCCATGAGGAACAGAGGTTGAATTTACTATGCTTTCTTCCCTTTGGCAATTCCGACAGGCCTTaGAGGAATTGGTTTTGGAGG +
Preference number: 5 (lower is better)
Translates to: SDSHEEQRLNLLCFLPFGNSDRP*RNWFWR
Trigger: CCTCCAAAACCAATTCCTCAAAGGCCTGTCGGAATT...GCCAAAGGGAAGAAAGCATAGTAAATTCAACCTCTGTTCCTCATGGGAGTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS-3UTR CAA 90 bp CACCCCTCTTTCAACCCAAGAAAGCTCCCAAAGCCCACAGTTCCTCTTACAGCTCATGAGGAACAGAGGTaGAATTTACTATGCTTTCTT +
Preference number: 5 (lower is better)
Translates to: HPSFNPRKLPKPTVPLTAHEEQR*NLLCFL
Trigger: AAGAAAGCATAGTAAATTCAACCTCTGTTCCTCATG...AGCTGTAAGAGGAACTGTGGGCTTTGGGAGCTTTCTTGGGTTGAAAGAGGGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CAA 90 bp GGCAAATCTCCGTCAAGTTGTCCATTTGACATGTGGCTTTGCACACTCTCACTGTTCTGGAATGCACTCTaGAGGAAATCAGATAAAATC +
Preference number: 5 (lower is better)
Translates to: GKSPSSCPFDMWLCTLSLFWNAL*RKSDKI
Trigger: GATTTTATCTGATTTCCTCAAGAGTGCATTCCAGAA...CAGTGAGAGTGTGCAAAGCCACATGTCAAATGGACAACTTGACGGAGATTTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479991.1
CDS-3UTR CAA 90 bp GACTCAAGGCAAGCAGTGGGTCTCTTTATAAGGGCACCTGAGTTTGTACCTAGAGTATTACTTTTCTCTTaGGAGAGAGGGGATCTTTTT +
Preference number: 5 (lower is better)
Translates to: DSRQAVGLFIRAPEFVPRVLLFS*ERGDLF
Trigger: AAAAAGATCCCCTCTCTCCAAAGAGAAAAGTAATAC...TCTAGGTACAAACTCAGGTGCCCTTATAAAGAGACCCACTGCTTGCCTTGAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000609883.1
CDS CCA 72 bp CAAAAGATCATCCGAGATACAGTCGGGCTCCGCGCGTaGGGGAGGCCGGCACAAGAAGGGCAGTTCTCCCCC +
Preference number: 6 (lower is better)
Translates to: QKIIRDTVGLRA*GRPAQEGQFSP
Trigger: GGGGGAGAACTGCCCTTCTTGTGCCGGCCTCCCCCACGCGCGGAGCCCGACTGTATCTCGGATGATCTTTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CCA 72 bp CGCAAGGAATTAACCTCGGCCAGGGCTCTCCCGAGCTaGAGGCCCAAATTGGCATTCTCCCCGCGAAGGGCA +
Preference number: 6 (lower is better)
Translates to: RKELTSARALPS*RPKLAFSPRRA
Trigger: TGCCCTTCGCGGGGAGAATGCCAATTTGGGCCTCCAGCTCGGGAGAGCCCTGGCCGAGGTTAATTCCTTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CCA 72 bp AAGCGCGGGAAGTTGGCATGCAAGGGGCTTCCTTCCTaGGTGACCGAGATGGCCCAGTCCTTGGCTTCGCCA +
Preference number: 6 (lower is better)
Translates to: KRGKLACKGLPS*VTEMAQSLASP
Trigger: TGGCGAAGCCAAGGACTGGGCCATCTCGGTCACCCAGGAAGGAAGCCCCTTGCATGCCAACTTCCCGCGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS TCA 72 bp GGCCACATTCGCCATGCGGAGGCTGTTGAGATTTCCTaGCGCCTCAGACATCTCGACAAGCCCAGGGGCCCT +
Preference number: 6 (lower is better)
Translates to: GHIRHAEAVEIS*RLRHLDKPRGP
Trigger: AGGGCCCCTGGGCTTGTCGAGATGTCTGAGGCGTCAGGAAATCTCAACAGCCTCCGCATGGCGAATGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS TCA 72 bp ATCAGAAAGGCCACCCGCTCGGCGCCCCCGGGGAAATaGACCTCATGGTCGGCTATGAAGGTCTCTAGCTGC +
Preference number: 6 (lower is better)
Translates to: IRKATRSAPPGK*TSWSAMKVSSC
Trigger: GCAGCTAGAGACCTTCATAGCCGACCATGAGGTTCATTTCCCCGGGGGCGCCGAGCGGGTGGCCTTTCTGAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CCA 72 bp CCTCGGCCAGGGCTCTCCCGAGCTGGAGGCCCAAATTaGCATTCTCCCCGCGAAGGGCATTTAATTCTTCGC +
Preference number: 6 (lower is better)
Translates to: PRPGLSRAGGPN*HSPREGHLILR
Trigger: GCGAAGAATTAAATGCCCTTCGCGGGGAGAATGCCAATTTGGGCCTCCAGCTCGGGAGAGCCCTGGCCGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CAA 90 bp GCATGCAAGGGGCTTCCTTCCTGGGTGACCGAGATGGCCCAGTCCTaGGCTTCGCCAGTGAAAAAGGAGATCAGAAAGGCCACCCGCTCG +
Preference number: 6 (lower is better)
Translates to: ACKGLPSWVTEMAQS*ASPVKKEIRKATRS
Trigger: CGAGCGGGTGGCCTTTCTGATCTCCTTTTTCACTGGCGAAGCCAAGGACTGGGCCATCTCGGTCACCCAGGAAGGAAGCCCCTTGCATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CCA 72 bp CAAGTTCTCCTCCGCAAGGACGGGCACTATGGGTACTaGCCAGCGGATGTAGCTGGAGACATTGCCCCGCAA +
Preference number: 6 (lower is better)
Translates to: QVLLRKDGHYGY*PADVAGDIAPQ
Trigger: TTGCGGGGCAATGTCTCCAGCTACATCCGCTGGCCAGTACCCATAGTGCCCGTCCTTGCGGAGGAGAACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CCA 72 bp CTCCTCCTCCACCTCACCATAGGTCTCCTCAGTCCCTaGATCCTGCTGTGGCTCTCCTTCTGGTTTCTGGCC +
Preference number: 6 (lower is better)
Translates to: LLLHLTIGLLSP*ILLWLSFWFLA
Trigger: GGCCAGAAACCAGAAGGAGAGCCACAGCAGGATCCAGGGACTGAGGAGACCTATGGTGAGGTGGAGGAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CAA 90 bp GGGCCACAGAATTCCTTACGGATTTCATCCAGGAAGCGCGGGAAGTaGGCATGCAAGGGGCTTCCTTCCTGGGTGACCGAGATGGCCCAG +
Preference number: 6 (lower is better)
Translates to: GPQNSLRISSRKRGK*ACKGLPSWVTEMAQ
Trigger: CTGGGCCATCTCGGTCACCCAGGAAGGAAGCCCCTTGCATGCCAACTTCCCGCGCTTCCTGGATGAAATCCGTAAGGAATTCTGTGGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CAA 90 bp GCATTTAATTCTTCGCGCAGGGCCACATTCGCCATGCGGAGGCTGTaGAGATTTCCTGACGCCTCAGACATCTCGACAAGCCCAGGGGCC +
Preference number: 6 (lower is better)
Translates to: AFNSSRRATFAMRRL*RFPDASDISTSPGA
Trigger: GGCCCCTGGGCTTGTCGAGATGTCTGAGGCGTCAGGAAATCTCAACAGCCTCCGCATGGCGAATGTGGCCCTGCGCGAAGAATTAAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS TCA 72 bp CGGCGCCCCCGGGGAAATGAACCTCATGGTCGGCTATaGAGGTCTCTAGCTGCATCAGGAATTCAGCCAGGT +
Preference number: 6 (lower is better)
Translates to: RRPRGNEPHGRL*RSLAASGIQPG
Trigger: ACCTGGCTGAATTCCTGATGCAGCTAGAGACCTTCATAGCCGACCATGAGGTTCATTTCCCCGGGGGCGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS TCA 72 bp GGCGTGGTAACCACTTGTGGGGCCAGAAGTCTGGGATaGCGCGTGAACAAAGGTCGGCTCCATCTCCATCAG +
Preference number: 6 (lower is better)
Translates to: GVVTTCGARSLG*RVNKGRLHLHQ
Trigger: CTGATGGAGATGGAGCCGACCTTTGTTCACGCGTCATCCCAGACTTCTGGCCCCACAAGTGGTTACCACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS GCA 72 bp TTACGGATTTCATCCAGGAAGCGCGGGAAGTTGGCATaGAAGGGGCTTCCTTCCTGGGTGACCGAGATGGCC +
Preference number: 6 (lower is better)
Translates to: LRISSRKRGKLA*KGLPSWVTEMA
Trigger: GGCCATCTCGGTCACCCAGGAAGGAAGCCCCTTGCATGCCAACTTCCCGCGCTTCCTGGATGAAATCCGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CCA 72 bp CGAACTCCAAGTTCTCCTCCGCAAGGACGGGCACTATaGGTACTGGCCAGCGGATGTAGCTGGAGACATTGC +
Preference number: 6 (lower is better)
Translates to: RTPSSPPQGRAL*VLASGCSWRHC
Trigger: GCAATGTCTCCAGCTACATCCGCTGGCCAGTACCCATAGTGCCCGTCCTTGCGGAGGAGAACTTGGAGTTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CCA 72 bp CTCACCATAGGTCTCCTCAGTCCCTGGATCCTGCTGTaGCTCTCCTTCTGGTTTCTGGCCCCCATCCTCATC +
Preference number: 6 (lower is better)
Translates to: LTIGLLSPWILL*LSFWFLAPILI
Trigger: GATGAGGATGGGGGCCAGAAACCAGAAGGAGAGCCACAGCAGGATCCAGGGACTGAGGAGACCTATGGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CCA 72 bp GGGATGCAAAAGAAGGGTGTGTTCTGGGTGGCCATCTaGCCCCAGCACTCAAACTCGAATTCGGCCACGAGC +
Preference number: 6 (lower is better)
Translates to: GMQKKGVFWVAI*PQHSNSNSATS
Trigger: GCTCGTGGCCGAATTCGAGTTTGAGTGCTGGGGCCAGATGGCCACCCAGAACACACCCTTCTTTTGCATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CAA 72 bp TCTTCGCGCAGGGCCACATTCGCCATGCGGAGGCTGTaGAGATTTCCTGACGCCTCAGACATCTCGACAAGC +
Preference number: 6 (lower is better)
Translates to: SSRRATFAMRRL*RFPDASDISTS
Trigger: GCTTGTCGAGATGTCTGAGGCGTCAGGAAATCTCAACAGCCTCCGCATGGCGAATGTGGCCCTGCGCGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CAA 72 bp GGGCTTCCTTCCTGGGTGACCGAGATGGCCCAGTCCTaGGCTTCGCCAGTGAAAAAGGAGATCAGAAAGGCC +
Preference number: 6 (lower is better)
Translates to: GLPSWVTEMAQS*ASPVKKEIRKA
Trigger: GGCCTTTCTGATCTCCTTTTTCACTGGCGAAGCCAAGGACTGGGCCATCTCGGTCACCCAGGAAGGAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CCA 72 bp CTTGCTGAAAAGCCCTCATGCGCTTCCTCTGGTCCTTaGAGTGAAGCCTGTGCCTGCGTGCCTCTTGGTCTT +
Preference number: 6 (lower is better)
Translates to: LAEKPSCASSGP*SEACACVPLGL
Trigger: AAGACCAAGAGGCACGCAGGCACAGGCTTCACTCCAAGGACCAGAGGAAGCGCATGAGGGCTTTTCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS GCA 72 bp CCTCCTTCTCCTTCATCTCTTGCTGAAAAGCCCTCATaGGCTTCCTCTGGTCCTTGGAGTGAAGCCTGTGCC +
Preference number: 6 (lower is better)
Translates to: PPSPSSLAEKPS*ASSGPWSEACA
Trigger: GGCACAGGCTTCACTCCAAGGACCAGAGGAAGCGCATGAGGGCTTTTCAGCAAGAGATGAAGGAGAAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CCA 72 bp CTCCTCAGTCCCTGGATCCTGCTGTGGCTCTCCTTCTaGTTTCTGGCCCCCATCCTCATCTTCATCTTCTTC +
Preference number: 6 (lower is better)
Translates to: LLSPWILLWLSF*FLAPILIFIFF
Trigger: GAAGAAGATGAAGATGAGGATGGGGGCCAGAAACCAGAAGGAGAGCCACAGCAGGATCCAGGGACTGAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CCA 72 bp ATGCACCCAGGAAGTTTTCGGCGTGGTAACCACTTGTaGGGCCAGAAGTCTGGGATGACGCGTGAACAAAGG +
Preference number: 6 (lower is better)
Translates to: MHPGSFRRGNHL*GQKSGMTREQR
Trigger: CCTTTGTTCACGCGTCATCCCAGACTTCTGGCCCCACAAGTGGTTACCACGCCGAAAACTTCCTGGGTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CAA 72 bp AATTCCTTACGGATTTCATCCAGGAAGCGCGGGAAGTaGGCATGCAAGGGGCTTCCTTCCTGGGTGACCGAG +
Preference number: 6 (lower is better)
Translates to: NSLRISSRKRGK*ACKGLPSWVTE
Trigger: CTCGGTCACCCAGGAAGGAAGCCCCTTGCATGCCAACTTCCCGCGCTTCCTGGATGAAATCCGTAAGGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS TCA 72 bp CTGGTTCCTCCGTCTGCTAGGCTGTATTATGGGAGGTaGTGCACCCAGGAAGTTTTCGGCGTGGTAACCACT +
Preference number: 6 (lower is better)
Translates to: LVPPSARLYYGR*CTQEVFGVVTT
Trigger: AGTGGTTACCACGCCGAAAACTTCCTGGGTGCATCACCTCCCATAATACAGCCTAGCAGACGGAGGAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CAA 72 bp GCGGAAGAATTCCGACAGGCCTTTGAGGAATTGGTTTaGGAGGCGGCAGTCATCCCAAGACAAGAATTGGGC +
Preference number: 6 (lower is better)
Translates to: AEEFRQAFEELV*EAAVIPRQELG
Trigger: GCCCAATTCTTGTCTTGGGATGACTGCCGCCTCCAAAACCAATTCCTCAAAGGCCTGTCGGAATTCTTCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CAA 90 bp GAGCTCTTTGCGGAAGAATTCCGACAGGCCTTTGAGGAATTGGTTTaGGAGGCGGCAGTCATCCCAAGACAAGAATTGGGCCAGGAACTG +
Preference number: 6 (lower is better)
Translates to: ELFAEEFRQAFEELV*EAAVIPRQELGQEL
Trigger: CAGTTCCTGGCCCAATTCTTGTCTTGGGATGACTGCCGCCTCCAAAACCAATTCCTCAAAGGCCTGTCGGAATTCTTCCGCAAAGAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CAA 90 bp TTCTTCCTCCTTCTTCATCTCCTCCTCCTCCTTCTCCTTCATCTCTaGCTGAAAAGCCCTCATGCGCTTCCTCTGGTCCTTGGAGTGAAG +
Preference number: 6 (lower is better)
Translates to: FFLLLHLLLLLLLHL*LKSPHALPLVLGVK
Trigger: CTTCACTCCAAGGACCAGAGGAAGCGCATGAGGGCTTTTCAGCAAGAGATGAAGGAGAAGGAGGAGGAGGAGATGAAGAAGGAGGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS TCA 72 bp ATAAGAGCTCTTTGCGGAAGAATTCCGACAGGCCTTTaGGGAATTGGTTTTGGAGGCGGCAGTCATCCCAAG +
Preference number: 6 (lower is better)
Translates to: IRALCGRIPTGL*GIGFGGGSHPK
Trigger: CTTGGGATGACTGCCGCCTCCAAAACCAATTCCTCAAAGGCCTGTCGGAATTCTTCCGCAAAGAGCTCTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CAA 72 bp TCCAGGTCGGCCATTTCTGTTGACCATAAGAGCTCTTaGCGGAAGAATTCCGACAGGCCTTTGAGGAATTGG +
Preference number: 6 (lower is better)
Translates to: SRSAISVDHKSS*RKNSDRPLRNW
Trigger: CCAATTCCTCAAAGGCCTGTCGGAATTCTTCCGCAAAGAGCTCTTATGGTCAACAGAAATGGCCGACCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CAA 90 bp ATCAGCTCATCCAGGTCGGCCATTTCTGTTGACCATAAGAGCTCTTaGCGGAAGAATTCCGACAGGCCTTTGAGGAATTGGTTTTGGAGG +
Preference number: 6 (lower is better)
Translates to: ISSSRSAISVDHKSS*RKNSDRPLRNWFWR
Trigger: CCTCCAAAACCAATTCCTCAAAGGCCTGTCGGAATTCTTCCGCAAAGAGCTCTTATGGTCAACAGAAATGGCCGACCTGGATGAGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CCA 72 bp TCTTTGCGGAAGAATTCCGACAGGCCTTTGAGGAATTaGTTTTGGAGGCGGCAGTCATCCCAAGACAAGAAT +
Preference number: 6 (lower is better)
Translates to: SLRKNSDRPLRN*FWRRQSSQDKN
Trigger: ATTCTTGTCTTGGGATGACTGCCGCCTCCAAAACCAATTCCTCAAAGGCCTGTCGGAATTCTTCCGCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CAA 90 bp GCAAAAGGGAAGATGATATTTCGAACTCCAGGGAGCGGGATAGGCTaGGGAACGCGCACTTTTCTTTCTATCTCCACACATTCGAGAATC +
Preference number: 6 (lower is better)
Translates to: AKGKMIFRTPGSGIG*GTRTFLSISTHSRI
Trigger: GATTCTCGAATGTGTGGAGATAGAAAGAAAAGTGCGCGTTCCCAAGCCTATCCCGCTCCCTGGAGTTCGAAATATCATCTTCCCTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CAA 72 bp ATTCGAGAATCAGCTCATCCAGGTCGGCCATTTCTGTaGACCATAAGAGCTCTTTGCGGAAGAATTCCGACA +
Preference number: 6 (lower is better)
Translates to: IRESAHPGRPFL*TIRALCGRIPT
Trigger: TGTCGGAATTCTTCCGCAAAGAGCTCTTATGGTCAACAGAAATGGCCGACCTGGATGAGCTGATTCTCGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1
CDS CAA 72 bp AAGATGATATTTCGAACTCCAGGGAGCGGGATAGGCTaGGGAACGCGCACTTTTCTTTCTATCTCCACACAT +
Preference number: 6 (lower is better)
Translates to: KMIFRTPGSGIG*GTRTFLSISTH
Trigger: ATGTGTGGAGATAGAAAGAAAAGTGCGCGTTCCCAAGCCTATCCCGCTCCCTGGAGTTCGAAATATCATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479991.1
ENST00000609883.1