RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RSPO2 (Homo sapiens)

Ensembl gene IDs: ENSG00000147655

Ensembl transcript IDs: ENST00000276659.10, ENST00000517781.5, ENST00000517939.5, ENST00000520026.1, ENST00000521757.1, ENST00000521956.5, ENST00000522333.1, ENST00000666252.1

Found 430 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTCCAGCGGTGTTCTGCAGCCTCACACCTCTAGCATGTCCATGGTaGCGGGGACGGATTCTCTCAGCACACACTGAGCCAAGTCACGGG +
Preference number: 1 (lower is better)
Translates to: PPAVFCSLTPLACPW*RGRILSAHTEPSHG
Trigger: CCCGTGACTTGGCTCAGTGTGTGCTGAGAGAATCCGTCCCCGGCACCATGGACATGCTAGAGGTGTGAGGCTGCAGAACACCGCTGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR CCA 90 bp CGTCCTCCAGCGGTGTTCTGCAGCCTCACACCTCTAGCATGTCCATaGTGCCGGGGACGGATTCTCTCAGCACACACTGAGCCAAGTCAC +
Preference number: 1 (lower is better)
Translates to: RPPAVFCSLTPLACP*CRGRILSAHTEPSH
Trigger: GTGACTTGGCTCAGTGTGTGCTGAGAGAATCCGTCCCCGGCACCATGGACATGCTAGAGGTGTGAGGCTGCAGAACACCGCTGGAGGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR CCA 90 bp GGAACAGCTCCAGTCTACAGCTCCCAGCATGGTCGGAGCAGAAGATaGGTGATTTCTGCATTTCCAACTGAGGAACACAGCTCCTCGCCA +
Preference number: 1 (lower is better)
Translates to: GTAPVYSSQHGRSRR*VISAFPTEEHSSSP
Trigger: TGGCGAGGAGCTGTGTTCCTCAGTTGGAAATGCAGAAATCACCCATCTTCTGCTCCGACCATGCTGGGAGCTGTAGACTGGAGCTGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR CCA 90 bp ATAACACAGGGGCCATGCTGGTGGTGCTTCCTTTCACCATGTTACTaGGAACAGATACTGGGCAGAGCAGCACAAAGGCTGCACACCAGT +
Preference number: 1 (lower is better)
Translates to: ITQGPCWWCFLSPCY*EQILGRAAQRLHTS
Trigger: ACTGGTGTGCAGCCTTTGTGCTGCTCTGCCCAGTATCTGTTCCCAGTAACATGGTGAAAGGAAGCACCACCAGCATGGCCCCTGTGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR CCA 90 bp GGGCTTCTGATTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTaGGACATGTGGAGTGGAGAAGGTCTACCCAATATGCAAACTCTT +
Preference number: 1 (lower is better)
Translates to: GLLIARCRLLLYLYV*DMWSGEGLPNMQTL
Trigger: AAGAGTTTGCATATTGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAATCAGAAGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR GCA 90 bp CAAAGTCATCACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTaGCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTG +
Preference number: 1 (lower is better)
Translates to: QSHHILDSKAVWASD*QMPPAALSICVGHV
Trigger: CACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTGATGACTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR CCA 90 bp CAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTaGAGAAGGTCTACCCAATATGCAAACTCTTTGACACTGGTCATT +
Preference number: 1 (lower is better)
Translates to: QMPPAALSICVGHVE*RRSTQYANSLTLVI
Trigger: AATGACCAGTGTCAAAGAGTTTGCATATTGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR TCA 90 bp TCATCAAAGTCATCACATCTTAGACTCAAAGGCAGTTTGGGCTTCTaGTTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACA +
Preference number: 1 (lower is better)
Translates to: SSKSSHLRLKGSLGF*LPDAACCFIYMCGT
Trigger: TGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTGATGACTTTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR CCA 90 bp TATCAGCTTCCTTTTCTTTTTCTTGTTCCTCTTCTCCTTCGCCTTTaGTGTTCTCTTCCCTCCTGGACAATGCCTCATTGTCATCTTGCA +
Preference number: 1 (lower is better)
Translates to: YQLPFLFLVPLLLRL*CSLPSWTMPHCHLA
Trigger: TGCAAGATGACAATGAGGCATTGTCCAGGAGGGAAGAGAACACCAAAGGCGAAGGAGAAGAGGAACAAGAAAAAGAAAAGGAAGCTGATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR TCA 90 bp GCAGTCAGAAATAATGTTTGTTTGGACAATTCTGTAGCTGGCCTGTaGAACTGGCTACAAGTGACTGGATATAGTCCCTCATGTTTTCAG +
Preference number: 1 (lower is better)
Translates to: AVRNNVCLDNSVAGL*NWLQVTGYSPSCFQ
Trigger: CTGAAAACATGAGGGACTATATCCAGTCACTTGTAGCCAGTTTCACAGGCCAGCTACAGAATTGTCCAAACAAACATTATTTCTGACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR TCA 90 bp CAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAAGGTAACATGCTaGGAATACCATGTGGTAACACTAAGCAGATATCCACACAAACAT +
Preference number: 1 (lower is better)
Translates to: QLKAVSSHNSVKVTC*EYHVVTLSRYPHKH
Trigger: ATGTTTGTGTGGATATCTGCTTAGTGTTACCACATGGTATTCTCAGCATGTTACCTTCACACTGTTGTGCGATGAAACTGCTTTTAGCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR TCA 90 bp AACATATCCTTGAAAATGCACAATGTGAGAAATAAAGGTCACGAGTaGGTAGCGCATTGCCTGCCAAGCATCTTCTTTCACATAAATAGG +
Preference number: 1 (lower is better)
Translates to: NISLKMHNVRNKGHE*VAHCLPSIFFHINR
Trigger: CCTATTTATGTGAAAGAAGATGCTTGGCAGGCAATGCGCTACTCACTCGTGACCTTTATTTCTCACATTGTGCATTTTCAAGGATATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR GCA 90 bp ATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAATATaGAAACTCTTTGACACTGGTCATTTGACTCTATATACAAAAACT +
Preference number: 1 (lower is better)
Translates to: IYMCGTCGVEKVYPI*KLFDTGHLTLYTKT
Trigger: AGTTTTTGTATATAGAGTCAAATGACCAGTGTCAAAGAGTTTGCATATTGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp TCCTCCAGCGGTGTTCTGCAGCCTCACACCTCTAGCATGTCCATGGTGCCGGGGGGGCCATGCTGGTGGTaGTTCCTTTCACCATGTTAC +
Preference number: 2 (lower is better)
Translates to: SSSGVLQPHTSSMSMVPGGPCWW*FLSPCY
Trigger: GTAACATGGTGAAAGGAAGCACCACCAGCATGGCCC...CCCCGGCACCATGGACATGCTAGAGGTGTGAGGCTGCAGAACACCGCTGGAGGA
59% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CCA 90 bp GCCGGGGACGGATTCTCTCAGCACACACTGAGCCAAGTCACGGGCTGTGCACTTCAGGGGCCATGCTGGTaGTGCTTCCTTTCACCATGT +
Preference number: 2 (lower is better)
Translates to: AGDGFSQHTLSQVTGCALQGPCW*CFLSPC
Trigger: ACATGGTGAAAGGAAGCACCACCAGCATGGCCCCTG...AAGTGCACAGCCCGTGACTTGGCTCAGTGTGTGCTGAGAGAATCCGTCCCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp ACTGGGAACAGATACTGGGCAGAGCAGCACAAAGGCTGCACACCAGTGTGCAGGCCTCCAGCGGTGTTCTaGAGCCTCACACCTCTAGCA +
Preference number: 2 (lower is better)
Translates to: TGNRYWAEQHKGCTPVCRPPAVF*SLTPLA
Trigger: TGCTAGAGGTGTGAGGCTGCAGAACACCGCTGGAGG...CCTGCACACTGGTGTGCAGCCTTTGTGCTGCTCTGCCCAGTATCTGTTCCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CCA 90 bp ACTGGGAACAGATACTGGGCAGAGCAGCACAAAGGCTGCACACCAGTGTGCAGGCCTCTAGCATGTCCATaGTGCCGGGGACGGATTCTC +
Preference number: 2 (lower is better)
Translates to: TGNRYWAEQHKGCTPVCRPLACP*CRGRIL
Trigger: GAGAATCCGTCCCCGGCACCATGGACATGCTAGAGG...CCTGCACACTGGTGTGCAGCCTTTGTGCTGCTCTGCCCAGTATCTGTTCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCGAGCAGCACAAAGGCTaGACACCAGTGTGCAGGAGT +
Preference number: 2 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSEQHKG*TPVCRS
Trigger: ACTCCTGCACACTGGTGTGCAGCCTTTGTGCTGCTC...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CCA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCCAGGGGCCATGCTGGTaGTGCTTCCTTTCACCATGT +
Preference number: 2 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSQGPCW*CFLSPC
Trigger: ACATGGTGAAAGGAAGCACCACCAGCATGGCCCCTG...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCGGGCCATGCTGGTGGTaGTTCCTTTCACCATGTTAC +
Preference number: 2 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSGPCWW*FLSPCY
Trigger: GTAACATGGTGAAAGGAAGCACCACCAGCATGGCCC...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp ACTGGGAACAGATACTGGGCAGAGCAGCACAAAGGCTGCACACCAGTGTGCAGGGGGCCATGCTGGTGGTaGTTCCTTTCACCATGTTAC +
Preference number: 2 (lower is better)
Translates to: TGNRYWAEQHKGCTPVCRGPCWW*FLSPCY
Trigger: GTAACATGGTGAAAGGAAGCACCACCAGCATGGCCC...CCTGCACACTGGTGTGCAGCCTTTGTGCTGCTCTGCCCAGTATCTGTTCCCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR TCA 90 bp GCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAGGCAGTTTGGGCTTCTaGTTGCCAGATGCCGCCTGC +
Preference number: 2 (lower is better)
Translates to: ACCFIYMCGTCGVEKVYPGSLGF*LPDAAC
Trigger: GCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCC...TGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp ACTGGGAACAGATACTGGGCAGAGCAGCACAAAGGCTGCACACCAGTGTGCAGGATAACACAGGGGCCATaGTGGTGGTGCTTCCTTTCA +
Preference number: 2 (lower is better)
Translates to: TGNRYWAEQHKGCTPVCRITQGP*WWCFLS
Trigger: TGAAAGGAAGCACCACCAGCATGGCCCCTGTGTTAT...CCTGCACACTGGTGTGCAGCCTTTGTGCTGCTCTGCCCAGTATCTGTTCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CCA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCACCAGTGTGCAGGAGTaGAGAGTAGCTTTGTGCACA +
Preference number: 2 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSTSVQE*RVALCT
Trigger: TGTGCACAAAGCTACTCTCCACTCCTGCACACTGGT...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp ATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTGCTCCAAGTCACGGGCTGTaGACTTACTCCTGCCTTCAC +
Preference number: 2 (lower is better)
Translates to: ILDSKAVWASDCQMPPAAPSHGL*TYSCLH
Trigger: GTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGG...AGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp TGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCTCCAGCGGTGTTCTaGAGCCTCACACCTCTAGCA +
Preference number: 2 (lower is better)
Translates to: CRLLLYLYVWDMWSGEGLPPAVF*SLTPLA
Trigger: TGCTAGAGGTGTGAGGCTGCAGAACACCGCTGGAGG...TAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTGTTTGGGCTTCTGATTaGCAGATGCCGCCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: HILDSKAVWASDCQMPPAVWASD*QMPPAA
Trigger: AGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAAC...AGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CCA 90 bp ATTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGACCTCTAGCATGTCCATaGTGCCGGGGACGGATTCTC +
Preference number: 2 (lower is better)
Translates to: IARCRLLLYLYVWDMWSGPLACP*CRGRIL
Trigger: GAGAATCCGTCCCCGGCACCATGGACATGCTAGAGG...TCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR TCA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCGAAACTGGCTACAAGTaGCTGGATATAGTCCCTCAT +
Preference number: 2 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSETGYK*LDIVPH
Trigger: ATGAGGGACTATATCCAGTCACTTGTAGCCAGTTTC...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR TCA 90 bp ACTGGGAACAGATACTGGGCAGAGCAGCACAAAGGCTGCACACCAGTGTGCAGGAAGAACAACTTCTGTTaGCATCGGCTACACCCATTG +
Preference number: 2 (lower is better)
Translates to: TGNRYWAEQHKGCTPVCRKNNFC*HRLHPL
Trigger: CAATGGGTGTAGCCGATGTCAACAGAAGTTGTTCTT...CCTGCACACTGGTGTGCAGCCTTTGTGCTGCTCTGCCCAGTATCTGTTCCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR-3UTR GCA 90 bp GCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAGTTTGGGCTTCTGATTaGCAGATGCCGCCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: ACCFIYMCGTCGVEKVYPVWASD*QMPPAA
Trigger: AGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAAC...TGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CCA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCCTTTCACCATGTTACTaGGAACAGATACTGGGCAGA +
Preference number: 2 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSLSPCY*EQILGR
Trigger: TCTGCCCAGTATCTGTTCCCAGTAACATGGTGAAAG...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR TCA 90 bp ACTGGGAACAGATACTGGGCAGAGCAGCACAAAGGCTGCACACCAGTGTGCAGGGTGAAGGTAACATGCTaGGAATACCATGTGGTAACA +
Preference number: 2 (lower is better)
Translates to: TGNRYWAEQHKGCTPVCRVKVTC*EYHVVT
Trigger: TGTTACCACATGGTATTCTCAGCATGTTACCTTCAC...CCTGCACACTGGTGTGCAGCCTTTGTGCTGCTCTGCCCAGTATCTGTTCCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CCA 90 bp ATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTGCTACCAGTGTGCAGGAGTaGAGAGTAGCTTTGTGCACA +
Preference number: 2 (lower is better)
Translates to: ILDSKAVWASDCQMPPAATSVQE*RVALCT
Trigger: TGTGCACAAAGCTACTCTCCACTCCTGCACACTGGT...AGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CCA 90 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTACCAGTGTGCAGGAGTaGAGAGTAGCTTTGTGCACA +
Preference number: 2 (lower is better)
Translates to: HILDSKAVWASDCQMPPATSVQE*RVALCT
Trigger: TGTGCACAAAGCTACTCTCCACTCCTGCACACTGGT...AGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR TCA 90 bp ATTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAAATAAAGGTCACGAGTaGGTAGCGCATTGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: IARCRLLLYLYVWDMWSGNKGHE*VAHCLP
Trigger: TGGCAGGCAATGCGCTACTCACTCGTGACCTTTATT...TCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR TCA 90 bp ATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTGCTGGAGCAGAAGATGGGTaGTTTCTGCATTTCCAACTG +
Preference number: 2 (lower is better)
Translates to: ILDSKAVWASDCQMPPAAGAEDG*FLHFQL
Trigger: CAGTTGGAAATGCAGAAATCACCCATCTTCTGCTCC...AGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR-3UTR GCA 90 bp GCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAATAACACAGGGGCCATaGTGGTGGTGCTTCCTTTCA +
Preference number: 2 (lower is better)
Translates to: ACCFIYMCGTCGVEKVYPITQGP*WWCFLS
Trigger: TGAAAGGAAGCACCACCAGCATGGCCCCTGTGTTAT...TGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CCA 90 bp ATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAATATGCAAACTCCCTCTAGCATGTCCATaGTGCCGGGGACGGATTCTC +
Preference number: 2 (lower is better)
Translates to: IYMCGTCGVEKVYPICKLPLACP*CRGRIL
Trigger: GAGAATCCGTCCCCGGCACCATGGACATGCTAGAGG...GAGTTTGCATATTGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CCA 90 bp ATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTGCTGTGGGACATGTGGAGTaGAGAAGGTCTACCCAATAT +
Preference number: 2 (lower is better)
Translates to: ILDSKAVWASDCQMPPAAVGHVE*RRSTQY
Trigger: ATATTGGGTAGACCTTCTCCACTCCACATGTCCCAC...AGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR CAA 90 bp TCTCCTTCGCCTTTGGTGTTCTCTTCCCTCCTGGACAATGCCTCATaGTCATCTTGCATCTCCTGGATTCAGCAATGGTTGGACACAGTA +
Preference number: 2 (lower is better)
Translates to: SPSPLVFSSLLDNAS*SSCISWIQQWLDTV
Trigger: TACTGTGTCCAACCATTGCTGAATCCAGGAGATGCAAGATGACAATGAGGCATTGTCCAGGAGGGAAGAGAACACCAAAGGCGAAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR-3UTR GCA 90 bp ATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAATATGCAAACTCCCAAGTCACGGGCTGTaGACTTACTCCTGCCTTCAC +
Preference number: 2 (lower is better)
Translates to: IYMCGTCGVEKVYPICKLPSHGL*TYSCLH
Trigger: GTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGG...GAGTTTGCATATTGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp TATGTAGCTCCTGCAGTATATGTACATATTAGGGCTGCAGTGAAACTGAGCAGGCCAAGTCACGGGCTGTaGACTTACTCCTGCCTTCAC +
Preference number: 2 (lower is better)
Translates to: YVAPAVYVHIRAAVKLSRPSHGL*TYSCLH
Trigger: GTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGG...CCTGCTCAGTTTCACTGCAGCCCTAATATGTACATATACTGCAGGAGCTACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp TATGTAGCTCCTGCAGTATATGTACATATTAGGGCTGCAGTGAAACTGAGCAGGCTAGCATGTCCATGGTaGCGGGGACGGATTCTCTCA +
Preference number: 2 (lower is better)
Translates to: YVAPAVYVHIRAAVKLSRLACPW*RGRILS
Trigger: TGAGAGAATCCGTCCCCGGCACCATGGACATGCTAG...CCTGCTCAGTTTCACTGCAGCCCTAATATGTACATATACTGCAGGAGCTACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp ATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAATATGCAAACTCCTAGCATGTCCATGGTaGCGGGGACGGATTCTCTCA +
Preference number: 2 (lower is better)
Translates to: IYMCGTCGVEKVYPICKLLACPW*RGRILS
Trigger: TGAGAGAATCCGTCCCCGGCACCATGGACATGCTAG...GAGTTTGCATATTGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp ACTGGGAACAGATACTGGGCAGAGCAGCACAAAGGCTGCACACCAGTGTGCAGGTTCTATTCTGCATCTTaGACATCTGTTCATATCTGG +
Preference number: 2 (lower is better)
Translates to: TGNRYWAEQHKGCTPVCRFYSAS*TSVHIW
Trigger: CCAGATATGAACAGATGTGCAAGATGCAGAATAGAA...CCTGCACACTGGTGTGCAGCCTTTGTGCTGCTCTGCCCAGTATCTGTTCCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR-3UTR CCA 90 bp GCAGTGAAACTGAGCAGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCCAGGGGCCATGCTGGTaGTGCTTCCTTTCACCATGT +
Preference number: 2 (lower is better)
Translates to: AVKLSRNFQSISSAKSSFQGPCW*CFLSPC
Trigger: ACATGGTGAAAGGAAGCACCACCAGCATGGCCCCTG...GAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCTGCTCAGTTTCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CCA 90 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTGCTCTGAAAGTCACCTaGGAAGTTTCCATAGTGTTC +
Preference number: 2 (lower is better)
Translates to: HILDSKAVWASDCQMPPAALKVT*EVSIVF
Trigger: GAACACTATGGAAACTTCCCAGGTGACTTTCAGAGC...AGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR CAA 90 bp GCCTTTGGTGTTCTCTTCCCTCCTGGACAATGCCTCATTGTCATCTaGCATCTCCTGGATTCAGCAATGGTTGGACACAGTATTGTGTCT +
Preference number: 2 (lower is better)
Translates to: AFGVLFPPGQCLIVI*HLLDSAMVGHSIVS
Trigger: AGACACAATACTGTGTCCAACCATTGCTGAATCCAGGAGATGCAAGATGACAATGAGGCATTGTCCAGGAGGGAAGAGAACACCAAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR-3UTR TCA 90 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTTTGAAACAACTGCTCTaGAAGTCACCTGGGAAGTTT +
Preference number: 2 (lower is better)
Translates to: HILDSKAVWASDCQMPPALKQLL*KSPGKF
Trigger: AAACTTCCCAGGTGACTTTCAGAGCAGTTGTTTCAA...AGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CCA 90 bp CATCCTTCCACACATTCCATGGTTTCTTCTAATGGTGCAAAACCATCTGGACATCTACAGCTCCCAGCATaGTCGGAGCAGAAGATGGGT +
Preference number: 2 (lower is better)
Translates to: HPSTHSMVSSNGAKPSGHLQLPA*SEQKMG
Trigger: ACCCATCTTCTGCTCCGACCATGCTGGGAGCTGTAG...ATGTCCAGATGGTTTTGCACCATTAGAAGAAACCATGGAATGTGTGGAAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR-3UTR CCA 90 bp ACTGGGAACAGATACTGGGCAGAGCAGCACAAAGGCTGCACACCAGTGTGCAGGTATTGTGTCTTTCACTaGCTTTTTAACAATTTGCCG +
Preference number: 2 (lower is better)
Translates to: TGNRYWAEQHKGCTPVCRYCVFH*LFNNLP
Trigger: CGGCAAATTGTTAAAAAGCCAGTGAAAGACACAATA...CCTGCACACTGGTGTGCAGCCTTTGTGCTGCTCTGCCCAGTATCTGTTCCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR-3UTR TCA 90 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTAAACCTGTTAAGATCTaGCTGGCAGTCACAGAAATT +
Preference number: 2 (lower is better)
Translates to: HILDSKAVWASDCQMPPAKPVKI*LAVTEI
Trigger: AATTTCTGTGACTGCCAGTCAGATCTTAACAGGTTT...AGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp AGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGGGCCATGCTGGTGGTaGTTCCTTTCACCATGTTAC +
Preference number: 2 (lower is better)
Translates to: RNFQSISSAKSSFIAQQCGPCWW*FLSPCY
Trigger: GTAACATGGTGAAAGGAAGCACCACCAGCATGGCCC...ACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp CTTCCACACATTCCATGGTTTCTTCTAATGGTGCAAAACCATCTGGACATTCATCTAGCATGTCCATGGTaGCGGGGACGGATTCTCTCA +
Preference number: 2 (lower is better)
Translates to: LPHIPWFLLMVQNHLDIHLACPW*RGRILS
Trigger: TGAGAGAATCCGTCCCCGGCACCATGGACATGCTAG...ATGAATGTCCAGATGGTTTTGCACCATTAGAAGAAACCATGGAATGTGTGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR-3UTR GCA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAAGTTTGGGCTTCTGATTaGCAGATGCCGCCTGCTGCT +
Preference number: 2 (lower is better)
Translates to: NFQSISSAKSSFIAQQCEVWASD*QMPPAA
Trigger: AGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAAC...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CCA 90 bp ATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAATATGCAAACTCACCAGTGTGCAGGAGTaGAGAGTAGCTTTGTGCACA +
Preference number: 2 (lower is better)
Translates to: IYMCGTCGVEKVYPICKLTSVQE*RVALCT
Trigger: TGTGCACAAAGCTACTCTCCACTCCTGCACACTGGT...GAGTTTGCATATTGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR CAA 90 bp CTATCAGCTTCCTTTTCTTTTTCTTGTTCCTCTTCTCCTTCGCCTTaGGTGTTCTCTTCCCTCCTGGACAATGCCTCATTGTCATCTTGC +
Preference number: 2 (lower is better)
Translates to: LSASFSFSCSSSPSP*VFSSLLDNASLSSC
Trigger: GCAAGATGACAATGAGGCATTGTCCAGGAGGGAAGAGAACACCAAAGGCGAAGGAGAAGAGGAACAAGAAAAAGAAAAGGAAGCTGATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR-3UTR TCA 90 bp GACATGAAAGGAGGTAACACTTCAGGATTAAATGTAAACCCTAAAGTTGTATACGGCAGTTTGGGCTTCTaGTTGCCAGATGCCGCCTGC +
Preference number: 2 (lower is better)
Translates to: DMKGGNTSGLNVNPKVVYGSLGF*LPDAAC
Trigger: GCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCC...GTATACAACTTTAGGGTTTACATTTAATCCTGAAGTGTTACCTCCTTTCATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR TCA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAATTCTGCATTTCCAACTaGGGAACACAGCTCCTCGCC +
Preference number: 2 (lower is better)
Translates to: NFQSISSAKSSFIAQQCEFCISN*GTQLLA
Trigger: GGCGAGGAGCTGTGTTCCTCAGTTGGAAATGCAGAA...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR-3UTR GCA 90 bp TATGTAGCTCCTGCAGTATATGTACATATTAGGGCTGCAGTGAAACTGAGCAGGCTGTGCACTTACTCCTaGCTTCACAGTCTCCAGATT +
Preference number: 2 (lower is better)
Translates to: YVAPAVYVHIRAAVKLSRLCTYS*LHSLQI
Trigger: AATCTGGAGACTGTGAAGGCAGGAGTAAGTGCACAG...CCTGCTCAGTTTCACTGCAGCCCTAATATGTACATATACTGCAGGAGCTACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CCA 90 bp TGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACTTCCACACATTCCATaGTTTCTTCTAATGGTGCAA +
Preference number: 2 (lower is better)
Translates to: CRLLLYLYVWDMWSGEGLLPHIP*FLLMVQ
Trigger: TTGCACCATTAGAAGAAACCATGGAATGTGTGGAAG...TAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR-3UTR TCA 90 bp CTTCCACACATTCCATGGTTTCTTCTAATGGTGCAAAACCATCTGGACATTCATAATAAAGGTCACGAGTaGGTAGCGCATTGCCTGCCA +
Preference number: 2 (lower is better)
Translates to: LPHIPWFLLMVQNHLDIHNKGHE*VAHCLP
Trigger: TGGCAGGCAATGCGCTACTCACTCGTGACCTTTATT...ATGAATGTCCAGATGGTTTTGCACCATTAGAAGAAACCATGGAATGTGTGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR-3UTR GCA 90 bp AGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTCTGTGCACTTACTCCTaGCTTCACAGTCTCCAGATT +
Preference number: 2 (lower is better)
Translates to: RNFQSISSAKSSFIAQQCLCTYS*LHSLQI
Trigger: AATCTGGAGACTGTGAAGGCAGGAGTAAGTGCACAG...ACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp GACATGAAAGGAGGTAACACTTCAGGATTAAATGTAAACCCTAAAGTTGTATACCCTCCAGCGGTGTTCTaGAGCCTCACACCTCTAGCA +
Preference number: 2 (lower is better)
Translates to: DMKGGNTSGLNVNPKVVYPPAVF*SLTPLA
Trigger: TGCTAGAGGTGTGAGGCTGCAGAACACCGCTGGAGG...GTATACAACTTTAGGGTTTACATTTAATCCTGAAGTGTTACCTCCTTTCATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAACCAGATGCCGCCTGCTaGTTTATCTATATGTGTGGG +
Preference number: 2 (lower is better)
Translates to: NFQSISSAKSSFIAQQCEPDAAC*FIYMCG
Trigger: CCCACACATATAGATAAAGCAGCAGGCGGCATCTGG...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CCA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAATATGTGTGGGACATGTaGAGTGGAGAAGGTCTACCC +
Preference number: 2 (lower is better)
Translates to: NFQSISSAKSSFIAQQCEYVWDM*SGEGLP
Trigger: GGGTAGACCTTCTCCACTCCACATGTCCCACACATA...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR TCA 90 bp TATGTAGCTCCTGCAGTATATGTACATATTAGGGCTGCAGTGAAACTGAGCAGGGTGAAGGTAACATGCTaGGAATACCATGTGGTAACA +
Preference number: 2 (lower is better)
Translates to: YVAPAVYVHIRAAVKLSRVKVTC*EYHVVT
Trigger: TGTTACCACATGGTATTCTCAGCATGTTACCTTCAC...CCTGCTCAGTTTCACTGCAGCCCTAATATGTACATATACTGCAGGAGCTACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp ATTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGATGGAGAGTAGCTTTGTaGACATTTGCAAAAACAAAA +
Preference number: 2 (lower is better)
Translates to: IARCRLLLYLYVWDMWSGWRVAL*TFAKTK
Trigger: TTTTGTTTTTGCAAATGTGCACAAAGCTACTCTCCA...TCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp CTTTTTAACAATTTGCCGTGTTCTGGTTTCCAGACCCCATTTAAATCCACATGTATAACACAGGGGCCATaGTGGTGGTGCTTCCTTTCA +
Preference number: 2 (lower is better)
Translates to: LFNNLPCSGFQTPFKSTCITQGP*WWCFLS
Trigger: TGAAAGGAAGCACCACCAGCATGGCCCCTGTGTTAT...ACATGTGGATTTAAATGGGGTCTGGAAACCAGAACACGGCAAATTGTTAAAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR-3UTR GCA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAACTGTGCACTTACTCCTaGCTTCACAGTCTCCAGATT +
Preference number: 2 (lower is better)
Translates to: NFQSISSAKSSFIAQQCELCTYS*LHSLQI
Trigger: AATCTGGAGACTGTGAAGGCAGGAGTAAGTGCACAG...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp GACATGAAAGGAGGTAACACTTCAGGATTAAATGTAAACCCTAAAGTTGTATACCCAAGTCACGGGCTGTaGACTTACTCCTGCCTTCAC +
Preference number: 2 (lower is better)
Translates to: DMKGGNTSGLNVNPKVVYPSHGL*TYSCLH
Trigger: GTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGG...GTATACAACTTTAGGGTTTACATTTAATCCTGAAGTGTTACCTCCTTTCATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp GACATGAAAGGAGGTAACACTTCAGGATTAAATGTAAACCCTAAAGTTGTATACCTAGCATGTCCATGGTaGCGGGGACGGATTCTCTCA +
Preference number: 2 (lower is better)
Translates to: DMKGGNTSGLNVNPKVVYLACPW*RGRILS
Trigger: TGAGAGAATCCGTCCCCGGCACCATGGACATGCTAG...GTATACAACTTTAGGGTTTACATTTAATCCTGAAGTGTTACCTCCTTTCATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAACTTCTGATTGCCAGATaGCGCCTGCTGCTTTATCTA +
Preference number: 2 (lower is better)
Translates to: NFQSISSAKSSFIAQQCELLIAR*RLLLYL
Trigger: TAGATAAAGCAGCAGGCGGCATCTGGCAATCAGAAG...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CCA 90 bp GACATGAAAGGAGGTAACACTTCAGGATTAAATGTAAACCCTAAAGTTGTATACCAGGGGCCATGCTGGTaGTGCTTCCTTTCACCATGT +
Preference number: 2 (lower is better)
Translates to: DMKGGNTSGLNVNPKVVYQGPCW*CFLSPC
Trigger: ACATGGTGAAAGGAAGCACCACCAGCATGGCCCCTG...GTATACAACTTTAGGGTTTACATTTAATCCTGAAGTGTTACCTCCTTTCATGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CCA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAAGACTCAAAGGCAGTTTaGGCTTCTGATTGCCAGATG +
Preference number: 2 (lower is better)
Translates to: NFQSISSAKSSFIAQQCEDSKAV*ASDCQM
Trigger: CATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTC...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CCA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAAGGTCGGAGCAGAAGATaGGTGATTTCTGCATTTCCA +
Preference number: 2 (lower is better)
Translates to: NFQSISSAKSSFIAQQCEGRSRR*VISAFP
Trigger: TGGAAATGCAGAAATCACCCATCTTCTGCTCCGACC...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR CAA 90 bp AATGGTTGGACACAGTATTGTGTCTTTCACTGGCTTTTTAACAATTaGCCGTGTTCTGGTTTCCAGACCCCATTTAAATCCACATGTGCG +
Preference number: 2 (lower is better)
Translates to: NGWTQYCVFHWLFNN*PCSGFQTPFKSTCA
Trigger: CGCACATGTGGATTTAAATGGGGTCTGGAAACCAGAACACGGCAAATTGTTAAAAAGCCAGTGAAAGACACAATACTGTGTCCAACCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR-3UTR GCA 90 bp GACATGAAAGGAGGTAACACTTCAGGATTAAATGTAAACCCTAAAGTTGTATACATAACACAGGGGCCATaGTGGTGGTGCTTCCTTTCA +
Preference number: 2 (lower is better)
Translates to: DMKGGNTSGLNVNPKVVYITQGP*WWCFLS
Trigger: TGAAAGGAAGCACCACCAGCATGGCCCCTGTGTTAT...GTATACAACTTTAGGGTTTACATTTAATCCTGAAGTGTTACCTCCTTTCATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp GCAGTGAAACTGAGCAGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCTGGAGAGTAGCTTTGTaGACATTTGCAAAAACAAAA +
Preference number: 2 (lower is better)
Translates to: AVKLSRNFQSISSAKSSFWRVAL*TFAKTK
Trigger: TTTTGTTTTTGCAAATGTGCACAAAGCTACTCTCCA...GAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCTGCTCAGTTTCACTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp ATAAAAGCCTACTTTGCACTTGGTACAAAAGTCTTTGCTAAAGCAAGAATCACACTGTGCACTTACTCCTaGCTTCACAGTCTCCAGATT +
Preference number: 2 (lower is better)
Translates to: IKAYFALGTKVFAKARITLCTYS*LHSLQI
Trigger: AATCTGGAGACTGTGAAGGCAGGAGTAAGTGCACAG...TGTGATTCTTGCTTTAGCAAAGACTTTTGTACCAAGTGCAAAGTAGGCTTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR-3UTR GCA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAAAAGGTCTACCCAATATaGAAACTCTTTGACACTGGT +
Preference number: 2 (lower is better)
Translates to: NFQSISSAKSSFIAQQCEKVYPI*KLFDTG
Trigger: ACCAGTGTCAAAGAGTTTGCATATTGGGTAGACCTT...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp GACATGAAAGGAGGTAACACTTCAGGATTAAATGTAAACCCTAAAGTTGTATACCTTCTGATTGCCAGATaGCGCCTGCTGCTTTATCTA +
Preference number: 2 (lower is better)
Translates to: DMKGGNTSGLNVNPKVVYLLIAR*RLLLYL
Trigger: TAGATAAAGCAGCAGGCGGCATCTGGCAATCAGAAG...GTATACAACTTTAGGGTTTACATTTAATCCTGAAGTGTTACCTCCTTTCATGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CCA 90 bp GACATGAAAGGAGGTAACACTTCAGGATTAAATGTAAACCCTAAAGTTGTATACGTGGGACATGTGGAGTaGAGAAGGTCTACCCAATAT +
Preference number: 2 (lower is better)
Translates to: DMKGGNTSGLNVNPKVVYVGHVE*RRSTQY
Trigger: ATATTGGGTAGACCTTCTCCACTCCACATGTCCCAC...GTATACAACTTTAGGGTTTACATTTAATCCTGAAGTGTTACCTCCTTTCATGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CCA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAACTTTATCTATATGTGTaGGACATGTGGAGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: NFQSISSAKSSFIAQQCELYLYV*DMWSGE
Trigger: TTCTCCACTCCACATGTCCCACACATATAGATAAAG...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CCA 90 bp GACATGAAAGGAGGTAACACTTCAGGATTAAATGTAAACCCTAAAGTTGTATACGACTCAAAGGCAGTTTaGGCTTCTGATTGCCAGATG +
Preference number: 2 (lower is better)
Translates to: DMKGGNTSGLNVNPKVVYDSKAV*ASDCQM
Trigger: CATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTC...GTATACAACTTTAGGGTTTACATTTAATCCTGAAGTGTTACCTCCTTTCATGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CCA 90 bp CTTTTTAACAATTTGCCGTGTTCTGGTTTCCAGACCCCATTTAAATCCACATGTGCAATGGAACAAAGCTaGATGGAGAATGACTTTGAC +
Preference number: 2 (lower is better)
Translates to: LFNNLPCSGFQTPFKSTCAMEQS*MENDFD
Trigger: GTCAAAGTCATTCTCCATCCAGCTTTGTTCCATTGC...ACATGTGGATTTAAATGGGGTCTGGAAACCAGAACACGGCAAATTGTTAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR-3UTR TCA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAAAATATGCAAACTCTTTaGCACTGGTCATTTGACTCT +
Preference number: 2 (lower is better)
Translates to: NFQSISSAKSSFIAQQCENMQTL*HWSFDS
Trigger: AGAGTCAAATGACCAGTGTCAAAGAGTTTGCATATT...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR TCA 90 bp GACATGAAAGGAGGTAACACTTCAGGATTAAATGTAAACCCTAAAGTTGTATACGAAACTGGCTACAAGTaGCTGGATATAGTCCCTCAT +
Preference number: 2 (lower is better)
Translates to: DMKGGNTSGLNVNPKVVYETGYK*LDIVPH
Trigger: ATGAGGGACTATATCCAGTCACTTGTAGCCAGTTTC...GTATACAACTTTAGGGTTTACATTTAATCCTGAAGTGTTACCTCCTTTCATGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CCA 90 bp ATAAAAGCCTACTTTGCACTTGGTACAAAAGTCTTTGCTAAAGCAAGAATCACAATAACTAGCAGGGGGTaGTTCCAAGATGGCCAAATA +
Preference number: 2 (lower is better)
Translates to: IKAYFALGTKVFAKARITITSRG*FQDGQI
Trigger: TATTTGGCCATCTTGGAACCACCCCCTGCTAGTTAT...TGTGATTCTTGCTTTAGCAAAGACTTTTGTACCAAGTGCAAAGTAGGCTTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR CAA 90 bp GTGGAGAAGGTCTACCCAATATGCAAACTCTTTGACACTGGTCATTaGACTCTATATACAAAAACTAGTTTATCCTACCCTTACAATGAG +
Preference number: 2 (lower is better)
Translates to: VEKVYPICKLFDTGH*TLYTKTSLSYPYNE
Trigger: CTCATTGTAAGGGTAGGATAAACTAGTTTTTGTATATAGAGTCAAATGACCAGTGTCAAAGAGTTTGCATATTGGGTAGACCTTCTCCAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR TCA 90 bp GACATGAAAGGAGGTAACACTTCAGGATTAAATGTAAACCCTAAAGTTGTATACGTGAAGGTAACATGCTaGGAATACCATGTGGTAACA +
Preference number: 2 (lower is better)
Translates to: DMKGGNTSGLNVNPKVVYVKVTC*EYHVVT
Trigger: TGTTACCACATGGTATTCTCAGCATGTTACCTTCAC...GTATACAACTTTAGGGTTTACATTTAATCCTGAAGTGTTACCTCCTTTCATGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAATGGAGAGTAGCTTTGTaGACATTTGCAAAAACAAAA +
Preference number: 2 (lower is better)
Translates to: NFQSISSAKSSFIAQQCEWRVAL*TFAKTK
Trigger: TTTTGTTTTTGCAAATGTGCACAAAGCTACTCTCCA...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR GCA 90 bp CTTCCACACATTCCATGGTTTCTTCTAATGGTGCAAAACCATCTGGACATTCATTGGAGAGTAGCTTTGTaGACATTTGCAAAAACAAAA +
Preference number: 2 (lower is better)
Translates to: LPHIPWFLLMVQNHLDIHWRVAL*TFAKTK
Trigger: TTTTGTTTTTGCAAATGTGCACAAAGCTACTCTCCA...ATGAATGTCCAGATGGTTTTGCACCATTAGAAGAAACCATGGAATGTGTGGAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR-3UTR GCA 90 bp CTTTTTAACAATTTGCCGTGTTCTGGTTTCCAGACCCCATTTAAATCCACATGTCACAGTTTTCTATTCTaGATCTTGCACATCTGTTCA +
Preference number: 2 (lower is better)
Translates to: LFNNLPCSGFQTPFKSTCHSFLF*ILHICS
Trigger: TGAACAGATGTGCAAGATGCAGAATAGAAAACTGTG...ACATGTGGATTTAAATGGGGTCTGGAAACCAGAACACGGCAAATTGTTAAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR-3UTR CCA 90 bp GACATGAAAGGAGGTAACACTTCAGGATTAAATGTAAACCCTAAAGTTGTATACCTTTATCTATATGTGTaGGACATGTGGAGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: DMKGGNTSGLNVNPKVVYLYLYV*DMWSGE
Trigger: TTCTCCACTCCACATGTCCCACACATATAGATAAAG...GTATACAACTTTAGGGTTTACATTTAATCCTGAAGTGTTACCTCCTTTCATGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CCA 90 bp GACATGAAAGGAGGTAACACTTCAGGATTAAATGTAAACCCTAAAGTTGTATACGTTCTAATTTTCTCCTaGATCAGCCAGGAAGATAAT +
Preference number: 2 (lower is better)
Translates to: DMKGGNTSGLNVNPKVVYVLIFS*ISQEDN
Trigger: ATTATCTTCCTGGCTGATCCAGGAGAAAATTAGAAC...GTATACAACTTTAGGGTTTACATTTAATCCTGAAGTGTTACCTCCTTTCATGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR CCA 72 bp GCGGTGTTCTGCAGCCTCACACCTCTAGCATGTCCATaGTGCCGGGGACGGATTCTCTCAGCACACACTGAG +
Preference number: 3 (lower is better)
Translates to: AVFCSLTPLACP*CRGRILSAHTE
Trigger: CTCAGTGTGTGCTGAGAGAATCCGTCCCCGGCACCATGGACATGCTAGAGGTGTGAGGCTGCAGAACACCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR GCA 72 bp GTGTTCTGCAGCCTCACACCTCTAGCATGTCCATGGTaGCGGGGACGGATTCTCTCAGCACACACTGAGCCA +
Preference number: 3 (lower is better)
Translates to: VFCSLTPLACPW*RGRILSAHTEP
Trigger: TGGCTCAGTGTGTGCTGAGAGAATCCGTCCCCGGCACCATGGACATGCTAGAGGTGTGAGGCTGCAGAACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CAA 90 bp TCCTCCAGCGGTGTTCTGCAGCCTCACACCTCTAGCATGTCCATGGTGCCGGGGGAGTGGAGAGTAGCTTaGTGCACATTTGCAAAAACA +
Preference number: 3 (lower is better)
Translates to: SSSGVLQPHTSSMSMVPGEWRVA*CTFAKT
Trigger: TGTTTTTGCAAATGTGCACAAAGCTACTCTCCACTC...CCCCGGCACCATGGACATGCTAGAGGTGTGAGGCTGCAGAACACCGCTGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CAA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCGAAGAACAACTTCTGTaGACATCGGCTACACCCATT +
Preference number: 3 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSEEQLL*TSATPI
Trigger: AATGGGTGTAGCCGATGTCAACAGAAGTTGTTCTTC...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR-3UTR CAA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCGAGTGGAGAGTAGCTTaGTGCACATTTGCAAAAACA +
Preference number: 3 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSEWRVA*CTFAKT
Trigger: TGTTTTTGCAAATGTGCACAAAGCTACTCTCCACTC...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CAA 90 bp ATTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGACGAGTGAGTAGCGCATaGCCTGCCAAGCATCTTCTT +
Preference number: 3 (lower is better)
Translates to: IARCRLLLYLYVWDMWSGRVSSA*PAKHLL
Trigger: AAGAAGATGCTTGGCAGGCAATGCGCTACTCACTCG...TCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CAA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCTGGCTTTTTAACAATTaGCCGTGTTCTGGTTTCCAG +
Preference number: 3 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSWLFNN*PCSGFQ
Trigger: CTGGAAACCAGAACACGGCAAATTGTTAAAAAGCCA...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR CCA 72 bp CCAAATAGGAACAGCTCCAGTCTACAGCTCCCAGCATaGTCGGAGCAGAAGATGGGTGATTTCTGCATTTCC +
Preference number: 3 (lower is better)
Translates to: PNRNSSSLQLPA*SEQKMGDFCIS
Trigger: GGAAATGCAGAAATCACCCATCTTCTGCTCCGACCATGCTGGGAGCTGTAGACTGGAGCTGTTCCTATTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR CCA 72 bp CCTCTTCTCCTTCGCCTTTGGTGTTCTCTTCCCTCCTaGACAATGCCTCATTGTCATCTTGCATCTCCTGGA +
Preference number: 3 (lower is better)
Translates to: PLLLRLWCSLPS*TMPHCHLASPG
Trigger: TCCAGGAGATGCAAGATGACAATGAGGCATTGTCCAGGAGGGAAGAGAACACCAAAGGCGAAGGAGAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR-3UTR CAA 90 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTACATTGGTAGGTGCCTaGTCATTTAAAGCCAGGGAT +
Preference number: 3 (lower is better)
Translates to: HILDSKAVWASDCQMPPATLVGA*SFKARD
Trigger: ATCCCTGGCTTTAAATGACAAGGCACCTACCAATGT...AGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CAA 90 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTAGTGACCCAAGAACATaGGTAGGTGCCTTGTCATTT +
Preference number: 3 (lower is better)
Translates to: HILDSKAVWASDCQMPPASDPRT*VGALSF
Trigger: AAATGACAAGGCACCTACCAATGTTCTTGGGTCACT...AGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CAA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCTTGGTACAAAAGTCTTaGCTAAAGCAAGAATCACAG +
Preference number: 3 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSLVQKS*LKQESQ
Trigger: CTGTGATTCTTGCTTTAGCAAAGACTTTTGTACCAA...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR-3UTR CAA 90 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTTGGATTCAGCAATGGTaGGACACAGTATTGTGTCTT +
Preference number: 3 (lower is better)
Translates to: HILDSKAVWASDCQMPPAWIQQW*DTVLCL
Trigger: AAGACACAATACTGTGTCCAACCATTGCTGAATCCA...AGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR-3UTR CAA 90 bp ATTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAGTGGAGAGTAGCTTaGTGCACATTTGCAAAAACA +
Preference number: 3 (lower is better)
Translates to: IARCRLLLYLYVWDMWSGEWRVA*CTFAKT
Trigger: TGTTTTTGCAAATGTGCACAAAGCTACTCTCCACTC...TCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CAA 90 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTAGGCTTTACCTTGCTTaGTTTCAAAATCCACAACCA +
Preference number: 3 (lower is better)
Translates to: HILDSKAVWASDCQMPPARLYLA*FQNPQP
Trigger: TGGTTGTGGATTTTGAAACAAAGCAAGGTAAAGCCT...AGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CAA 90 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTACTGAAGAGGTAGTTTaGCCAATGCAAGGTGAAAAA +
Preference number: 3 (lower is better)
Translates to: HILDSKAVWASDCQMPPATEEVV*PMQGEK
Trigger: TTTTTCACCTTGCATTGGCAAAACTACCTCTTCAGT...AGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CAA 90 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTAAGCCTACTTTGCACTaGGTACAAAAGTCTTTGCTA +
Preference number: 3 (lower is better)
Translates to: HILDSKAVWASDCQMPPAKPTLH*VQKSLL
Trigger: TAGCAAAGACTTTTGTACCAAGTGCAAAGTAGGCTT...AGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR GCA 72 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTaGCAGATGCCGCCTGCTGCTTTATCTATATGTGTG +
Preference number: 3 (lower is better)
Translates to: HILDSKAVWASD*QMPPAALSICV
Trigger: CACACATATAGATAAAGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR CCA 72 bp TGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTaGAGTGGAGAAGGTCTACCCAATATGCAAACTCTT +
Preference number: 3 (lower is better)
Translates to: CRLLLYLYVWDM*SGEGLPNMQTL
Trigger: AAGAGTTTGCATATTGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CAA 90 bp GCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAAGGCTTTACCTTGCTTaGTTTCAAAATCCACAACCA +
Preference number: 3 (lower is better)
Translates to: ACCFIYMCGTCGVEKVYPRLYLA*FQNPQP
Trigger: TGGTTGTGGATTTTGAAACAAAGCAAGGTAAAGCCT...TGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CAA 90 bp GCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAACTGAAGAGGTAGTTTaGCCAATGCAAGGTGAAAAA +
Preference number: 3 (lower is better)
Translates to: ACCFIYMCGTCGVEKVYPTEEVV*PMQGEK
Trigger: TTTTTCACCTTGCATTGGCAAAACTACCTCTTCAGT...TGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CAA 90 bp ATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAATATGCAAACTCTGCCTCATTGTCATCTaGCATCTCCTGGATTCAGCA +
Preference number: 3 (lower is better)
Translates to: IYMCGTCGVEKVYPICKLCLIVI*HLLDSA
Trigger: TGCTGAATCCAGGAGATGCAAGATGACAATGAGGCA...GAGTTTGCATATTGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR-3UTR CAA 90 bp ATTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAAATCTACCGGATCTCTaGTTTTATTGGTTAGCTCTG +
Preference number: 3 (lower is better)
Translates to: IARCRLLLYLYVWDMWSGNLPDL*FYWLAL
Trigger: CAGAGCTAACCAATAAAACAAGAGATCCGGTAGATT...TCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR TCA 72 bp TCATCACATCTTAGACTCAAAGGCAGTTTGGGCTTCTaGTTGCCAGATGCCGCCTGCTGCTTTATCTATATG +
Preference number: 3 (lower is better)
Translates to: SSHLRLKGSLGF*LPDAACCFIYM
Trigger: CATATAGATAAAGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CAA 90 bp TGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTATTAATCAGGTATGACTaGTTACCCACAAGAAAGCAT +
Preference number: 3 (lower is better)
Translates to: CRLLLYLYVWDMWSGEGLLIRYD*LPTRKH
Trigger: ATGCTTTCTTGTGGGTAACAAGTCATACCTGATTAA...TAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR TCA 72 bp CGATTATTTCTGCTACAAGTTCCCCATTCGCTCCAATaGCCAACTTCACATCCTTCCACACATTCCATGGTT +
Preference number: 3 (lower is better)
Translates to: RLFLLQVPHSLQ*PTSHPSTHSMV
Trigger: AACCATGGAATGTGTGGAAGGATGTGAAGTTGGTCATTGGAGCGAATGGGGAACTTGTAGCAGAAATAATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR CCA 72 bp CCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTaGAGAAGGTCTACCCAATATGCAAACTCTTTGACA +
Preference number: 3 (lower is better)
Translates to: PAALSICVGHVE*RRSTQYANSLT
Trigger: TGTCAAAGAGTTTGCATATTGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CAA 90 bp ATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAATATGCAAACTCGAGTGGAGAGTAGCTTaGTGCACATTTGCAAAAACA +
Preference number: 3 (lower is better)
Translates to: IYMCGTCGVEKVYPICKLEWRVA*CTFAKT
Trigger: TGTTTTTGCAAATGTGCACAAAGCTACTCTCCACTC...GAGTTTGCATATTGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR TCA 72 bp TTGAAAATGCACAATGTGAGAAATAAAGGTCACGAGTaGGTAGCGCATTGCCTGCCAAGCATCTTCTTTCAC +
Preference number: 3 (lower is better)
Translates to: LKMHNVRNKGHE*VAHCLPSIFFH
Trigger: GTGAAAGAAGATGCTTGGCAGGCAATGCGCTACTCACTCGTGACCTTTATTTCTCACATTGTGCATTTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR TCA 72 bp GCAGTTTCATCGCACAACAGTGTGAAGGTAACATGCTaGGAATACCATGTGGTAACACTAAGCAGATATCCA +
Preference number: 3 (lower is better)
Translates to: AVSSHNSVKVTC*EYHVVTLSRYP
Trigger: TGGATATCTGCTTAGTGTTACCACATGGTATTCTCAGCATGTTACCTTCACACTGTTGTGCGATGAAACTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CAA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAACATCGGCTACACCCATaGTCCTTTGAACAAGACAAA +
Preference number: 3 (lower is better)
Translates to: NFQSISSAKSSFIAQQCEHRLHP*SFEQDK
Trigger: TTTGTCTTGTTCAAAGGACAATGGGTGTAGCCGATG...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR TCA 72 bp AATAATGTTTGTTTGGACAATTCTGTAGCTGGCCTGTaGAACTGGCTACAAGTGACTGGATATAGTCCCTCA +
Preference number: 3 (lower is better)
Translates to: NNVCLDNSVAGL*NWLQVTGYSPS
Trigger: TGAGGGACTATATCCAGTCACTTGTAGCCAGTTTCACAGGCCAGCTACAGAATTGTCCAAACAAACATTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR TCA 72 bp AAACAGATTCTGGCTCAACAGAAACCTGTTAAGATCTaGCTGGCAGTCACAGAAATTCATCCTTTTATCTCC +
Preference number: 3 (lower is better)
Translates to: KQILAQQKPVKI*LAVTEIHPFIS
Trigger: GGAGATAAAAGGATGAATTTCTGTGACTGCCAGTCAGATCTTAACAGGTTTCTGTTGAGCCAGAATCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CAA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAATTTCTATTCTGCATCTaGCACATCTGTTCATATCTG +
Preference number: 3 (lower is better)
Translates to: NFQSISSAKSSFIAQQCEFLFCI*HICSYL
Trigger: CAGATATGAACAGATGTGCAAGATGCAGAATAGAAA...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666252.1
3UTR-3UTR CAA 90 bp GACATGAAAGGAGGTAACACTTCAGGATTAAATGTAAACCCTAAAGTTGTATACACTGAAGAGGTAGTTTaGCCAATGCAAGGTGAAAAA +
Preference number: 3 (lower is better)
Translates to: DMKGGNTSGLNVNPKVVYTEEVV*PMQGEK
Trigger: TTTTTCACCTTGCATTGGCAAAACTACCTCTTCAGT...GTATACAACTTTAGGGTTTACATTTAATCCTGAAGTGTTACCTCCTTTCATGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR-3UTR CAA 90 bp GACATGAAAGGAGGTAACACTTCAGGATTAAATGTAAACCCTAAAGTTGTATACAGAAATAATGTTTGTTaGGACAATTCTGTAGCTGGC +
Preference number: 3 (lower is better)
Translates to: DMKGGNTSGLNVNPKVVYRNNVC*DNSVAG
Trigger: GCCAGCTACAGAATTGTCCAAACAAACATTATTTCT...GTATACAACTTTAGGGTTTACATTTAATCCTGAAGTGTTACCTCCTTTCATGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp ACTGGGAACAGATACTGGGCAGAGCAGCACAAAGGCTGCACACCAGTGTGCAGGGGCGGGTGCAGCCACTaGGATGCTCCGTCCCCGCCC +
Preference number: 4 (lower is better)
Translates to: TGNRYWAEQHKGCTPVCRGGCSH*DAPSPP
Trigger: GGGCGGGGACGGAGCATCCCAGTGGCTGCACCCGCC...CCTGCACACTGGTGTGCAGCCTTTGTGCTGCTCTGCCCAGTATCTGTTCCCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS-3UTR GCA 90 bp GCCGGGGACGGATTCTCTCAGCACACACTGAGCCAAGTCACGGGCTGTGCACTTGGCTGGGGAAAAGTTTaGCGAGACCGGCTGGGAGCG +
Preference number: 4 (lower is better)
Translates to: AGDGFSQHTLSQVTGCALGWGKV*RDRLGA
Trigger: CGCTCCCAGCCGGTCTCGGCAAACTTTTCCCCAGCC...AAGTGCACAGCCCGTGACTTGGCTCAGTGTGTGCTGAGAGAATCCGTCCCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS-3UTR CCA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCAGCGCCTGGCAGCTCTaGAATTCCAGCGGCCGCCGC +
Preference number: 4 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSSAWQL*NSSGRR
Trigger: GCGGCGGCCGCTGGAATTCCAGAGCTGCCAGGCGCT...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS-3UTR TCA 90 bp GCCGGGGACGGATTCTCTCAGCACACACTGAGCCAAGTCACGGGCTGTGCACTTGGCAGTTTGGGCTTCTaGTTGCCAGATGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: AGDGFSQHTLSQVTGCALGSLGF*LPDAAC
Trigger: GCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCC...AAGTGCACAGCCCGTGACTTGGCTCAGTGTGTGCTGAGAGAATCCGTCCCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp ACTGGGAACAGATACTGGGCAGAGCAGCACAAAGGCTGCACACCAGTGTGCAGGTCCCCAGGCAAGGGGTaGGCCCGCTCACACTCTCTG +
Preference number: 4 (lower is better)
Translates to: TGNRYWAEQHKGCTPVCRSPGKG*ARSHSL
Trigger: CAGAGAGTGTGAGCGGGCGCACCCCTTGCCTGGGGA...CCTGCACACTGGTGTGCAGCCTTTGTGCTGCTCTGCCCAGTATCTGTTCCCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS-3UTR GCA 90 bp ATTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGACTCCGCCACGAACCGTaGGCACGTCTCGGGCGGCGC +
Preference number: 4 (lower is better)
Translates to: IARCRLLLYLYVWDMWSGLRHEP*ARLGRR
Trigger: GCGCCGCCCGAGACGTGCGCACGGTTCGTGGCGGAG...TCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS-3UTR GCA 90 bp TCCTCCAGCGGTGTTCTGCAGCCTCACACCTCTAGCATGTCCATGGTGCCGGGGCCAAGTCACGGGCTGTaGACTTACTCCTGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: SSSGVLQPHTSSMSMVPGPSHGL*TYSCLH
Trigger: GTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGG...CCCCGGCACCATGGACATGCTAGAGGTGTGAGGCTGCAGAACACCGCTGGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR TCA 90 bp TCCTCCAGCGGTGTTCTGCAGCCTCACACCTCTAGCATGTCCATGGTGCCGGGGCCCCATTCGCTCCAATaGCCAACTTCACATCCTTCC +
Preference number: 4 (lower is better)
Translates to: SSSGVLQPHTSSMSMVPGPHSLQ*PTSHPS
Trigger: GGAAGGATGTGAAGTTGGTCATTGGAGCGAATGGGG...CCCCGGCACCATGGACATGCTAGAGGTGTGAGGCTGCAGAACACCGCTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517939.5
ENST00000666252.1
CDS-3UTR TCA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCGGCAGTTTGGGCTTCTaGTTGCCAGATGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSGSLGF*LPDAAC
Trigger: GCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCC...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp ACTGGGAACAGATACTGGGCAGAGCAGCACAAAGGCTGCACACCAGTGTGCAGGGAGAAAAGGCGAAACTaGATCTGGGCGGTCGGGCGG +
Preference number: 4 (lower is better)
Translates to: TGNRYWAEQHKGCTPVCREKRRN*IWAVGR
Trigger: CCGCCCGACCGCCCAGATGCAGTTTCGCCTTTTCTC...CCTGCACACTGGTGTGCAGCCTTTGTGCTGCTCTGCCCAGTATCTGTTCCCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000666252.1
CDS-3UTR GCA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCGAGAAAAGGCGAAACTaGATCTGGGCGGTCGGGCGG +
Preference number: 4 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSEKRRN*IWAVGR
Trigger: CCGCCCGACCGCCCAGATGCAGTTTCGCCTTTTCTC...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000666252.1
CDS-3UTR GCA 90 bp TCCTCCAGCGGTGTTCTGCAGCCTCACACCTCTAGCATGTCCATGGTGCCGGGGTGCGTCTCCATCGGTTaGCTTGGCAGTGGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: SSSGVLQPHTSSMSMVPGCVSIG*LGSGCN
Trigger: ATTACAGCCACTGCCAAGGCAACCGATGGAGACGCA...CCCCGGCACCATGGACATGCTAGAGGTGTGAGGCTGCAGAACACCGCTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000666252.1
CDS-3UTR CCA 90 bp GCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCACGCCGGCCGCGCTGCTaGGGAGGACTCAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: ACCFIYMCGTCGVEKVYPRRPRC*GGLRGR
Trigger: TCTCCCTCTGAGTCCTCCCCAGCAGCGCGGCCGGCG...TGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000666252.1
CDS-3UTR CCA 90 bp ATTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGACGCCGGCCGCGCTGCTaGGGAGGACTCAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: IARCRLLLYLYVWDMWSGRRPRC*GGLRGR
Trigger: TCTCCCTCTGAGTCCTCCCCAGCAGCGCGGCCGGCG...TCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000666252.1
CDS-3UTR TCA 90 bp ACTGGGAACAGATACTGGGCAGAGCAGCACAAAGGCTGCACACCAGTGTGCAGGCTCGGGAGGACGAAGTaGTCCGAAGGGATGTGGCAA +
Preference number: 4 (lower is better)
Translates to: TGNRYWAEQHKGCTPVCRLGRTK*SEGMWQ
Trigger: TTGCCACATCCCTTCGGATCACTTCGTCCTCCCGAG...CCTGCACACTGGTGTGCAGCCTTTGTGCTGCTCTGCCCAGTATCTGTTCCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS-3UTR TCA 90 bp TCCTCCAGCGGTGTTCTGCAGCCTCACACCTCTAGCATGTCCATGGTGCCGGGGAATAAAGGTCACGAGTaGGTAGCGCATTGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: SSSGVLQPHTSSMSMVPGNKGHE*VAHCLP
Trigger: TGGCAGGCAATGCGCTACTCACTCGTGACCTTTATT...CCCCGGCACCATGGACATGCTAGAGGTGTGAGGCTGCAGAACACCGCTGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp GCCGGGGACGGATTCTCTCAGCACACACTGAGCCAAGTCACGGGCTGTGCACTTGGGCCATGCTGGTGGTaGTTCCTTTCACCATGTTAC +
Preference number: 4 (lower is better)
Translates to: AGDGFSQHTLSQVTGCALGPCWW*FLSPCY
Trigger: GTAACATGGTGAAAGGAAGCACCACCAGCATGGCCC...AAGTGCACAGCCCGTGACTTGGCTCAGTGTGTGCTGAGAGAATCCGTCCCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCCCTCTAGCATGTCCATaGTGCCGGGGACGGATTCTC +
Preference number: 4 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSPLACP*CRGRIL
Trigger: GAGAATCCGTCCCCGGCACCATGGACATGCTAGAGG...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp TCCTCCAGCGGTGTTCTGCAGCCTCACACCTCTAGCATGTCCATGGTGCCGGGGCTGTGCACTTACTCCTaGCTTCACAGTCTCCAGATT +
Preference number: 4 (lower is better)
Translates to: SSSGVLQPHTSSMSMVPGLCTYS*LHSLQI
Trigger: AATCTGGAGACTGTGAAGGCAGGAGTAAGTGCACAG...CCCCGGCACCATGGACATGCTAGAGGTGTGAGGCTGCAGAACACCGCTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp ATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTGCTCGGCATAATGCGTTGTaGCGGCGCTCCGGGGAAAGG +
Preference number: 4 (lower is better)
Translates to: ILDSKAVWASDCQMPPAARHNAL*RRSGER
Trigger: CCTTTCCCCGGAGCGCCGGCACAACGCATTATGCCG...AGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517781.5
CDS-3UTR CCA 90 bp GCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAAGGCGAAACTGCATCTaGGCGGTCGGGCGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: ACCFIYMCGTCGVEKVYPRRNCI*AVGRGR
Trigger: TCTCCCCCGCCCGACCGCCCAGATGCAGTTTCGCCT...TGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000666252.1
CDS-3UTR CCA 90 bp GCCGGGGACGGATTCTCTCAGCACACACTGAGCCAAGTCACGGGCTGTGCACTTACCAGTGTGCAGGAGTaGAGAGTAGCTTTGTGCACA +
Preference number: 4 (lower is better)
Translates to: AGDGFSQHTLSQVTGCALTSVQE*RVALCT
Trigger: TGTGCACAAAGCTACTCTCCACTCCTGCACACTGGT...AAGTGCACAGCCCGTGACTTGGCTCAGTGTGTGCTGAGAGAATCCGTCCCCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp ACTGGGAACAGATACTGGGCAGAGCAGCACAAAGGCTGCACACCAGTGTGCAGGCTACAGCTCCCAGCATaGTCGGAGCAGAAGATGGGT +
Preference number: 4 (lower is better)
Translates to: TGNRYWAEQHKGCTPVCRLQLPA*SEQKMG
Trigger: ACCCATCTTCTGCTCCGACCATGCTGGGAGCTGTAG...CCTGCACACTGGTGTGCAGCCTTTGTGCTGCTCTGCCCAGTATCTGTTCCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666252.1
CDS-3UTR TCA 90 bp TCCTCCAGCGGTGTTCTGCAGCCTCACACCTCTAGCATGTCCATGGTGCCGGGGGAAACTGGCTACAAGTaGCTGGATATAGTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: SSSGVLQPHTSSMSMVPGETGYK*LDIVPH
Trigger: ATGAGGGACTATATCCAGTCACTTGTAGCCAGTTTC...CCCCGGCACCATGGACATGCTAGAGGTGTGAGGCTGCAGAACACCGCTGGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTGAGAAAAGGCGAAACTaGATCTGGGCGGTCGGGCGG +
Preference number: 4 (lower is better)
Translates to: HILDSKAVWASDCQMPPAEKRRN*IWAVGR
Trigger: CCGCCCGACCGCCCAGATGCAGTTTCGCCTTTTCTC...AGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000666252.1
CDS-3UTR GCA 90 bp GCCGGGGACGGATTCTCTCAGCACACACTGAGCCAAGTCACGGGCTGTGCACTTCTTCTGATTGCCAGATaGCGCCTGCTGCTTTATCTA +
Preference number: 4 (lower is better)
Translates to: AGDGFSQHTLSQVTGCALLLIAR*RLLLYL
Trigger: TAGATAAAGCAGCAGGCGGCATCTGGCAATCAGAAG...AAGTGCACAGCCCGTGACTTGGCTCAGTGTGTGCTGAGAGAATCCGTCCCCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp GCAGTGAAACTGAGCAGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCCGCCGGCCGCGCTGCTaGGGAGGACTCAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: AVKLSRNFQSISSAKSSFRRPRC*GGLRGR
Trigger: TCTCCCTCTGAGTCCTCCCCAGCAGCGCGGCCGGCG...GAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCTGCTCAGTTTCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000666252.1
CDS-3UTR CCA 90 bp TGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACAGCTGCGGCTGCCTTaGTGTGGGTTGCCTACCGTG +
Preference number: 4 (lower is better)
Translates to: CRLLLYLYVWDMWSGEGLQLRLP*CGLPTV
Trigger: CACGGTAGGCAACCCACACCAAGGCAGCCGCAGCTG...TAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517781.5
CDS-3UTR TCA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCAATAAAGGTCACGAGTaGGTAGCGCATTGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSNKGHE*VAHCLP
Trigger: TGGCAGGCAATGCGCTACTCACTCGTGACCTTTATT...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR TCA 90 bp TCCTCCAGCGGTGTTCTGCAGCCTCACACCTCTAGCATGTCCATGGTGCCGGGGGTGAAGGTAACATGCTaGGAATACCATGTGGTAACA +
Preference number: 4 (lower is better)
Translates to: SSSGVLQPHTSSMSMVPGVKVTC*EYHVVT
Trigger: TGTTACCACATGGTATTCTCAGCATGTTACCTTCAC...CCCCGGCACCATGGACATGCTAGAGGTGTGAGGCTGCAGAACACCGCTGGAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR TCA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCTCTGTAGCTGGCCTGTaGAACTGGCTACAAGTGACT +
Preference number: 4 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSSVAGL*NWLQVT
Trigger: AGTCACTTGTAGCCAGTTTCACAGGCCAGCTACAGA...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR TCA 90 bp ACTGGGAACAGATACTGGGCAGAGCAGCACAAAGGCTGCACACCAGTGTGCAGGTCTGTAGCTGGCCTGTaGAACTGGCTACAAGTGACT +
Preference number: 4 (lower is better)
Translates to: TGNRYWAEQHKGCTPVCRSVAGL*NWLQVT
Trigger: AGTCACTTGTAGCCAGTTTCACAGGCCAGCTACAGA...CCTGCACACTGGTGTGCAGCCTTTGTGCTGCTCTGCCCAGTATCTGTTCCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAAGCGCGGAGCGGCGGGTaGAGCCACTGGGATGCTCCG +
Preference number: 4 (lower is better)
Translates to: NFQSISSAKSSFIAQQCEARSGG*SHWDAP
Trigger: CGGAGCATCCCAGTGGCTGCACCCGCCGCTCCGCGC...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS-3UTR GCA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCCCAGATGCCGCCTGCTaGTTTATCTATATGTGTGGG +
Preference number: 4 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSPDAAC*FIYMCG
Trigger: CCCACACATATAGATAAAGCAGCAGGCGGCATCTGG...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp ATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAATATGCAAACTCCCCAAGCGCCGCAGCTaGGGCTGCCTTGGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: IYMCGTCGVEKVYPICKLPKRRS*GCLGVG
Trigger: ACCCACACCAAGGCAGCCGCAGCTGCGGCGCTTGGG...GAGTTTGCATATTGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517781.5
CDS-3UTR GCA 90 bp GCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCATCCAGAGCGGGCAGCTaGGGACGAGTTGGAGAGGAA +
Preference number: 4 (lower is better)
Translates to: ACCFIYMCGTCGVEKVYPSRAGS*GRVGEE
Trigger: TTCCTCTCCAACTCGTCCGCAGCTGCCCGCTCTGGA...TGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517781.5
CDS-3UTR CCA 90 bp ACTGGGAACAGATACTGGGCAGAGCAGCACAAAGGCTGCACACCAGTGTGCAGGTCAAAGTCTAGGAACTaGAGGGTTCGCCCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: TGNRYWAEQHKGCTPVCRSKSRN*RVRPKS
Trigger: GCTCTTTGGGCGAACCCTCCAGTTCCTAGACTTTGA...CCTGCACACTGGTGTGCAGCCTTTGTGCTGCTCTGCCCAGTATCTGTTCCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000666252.1
CDS-3UTR CCA 90 bp GCCGGGGACGGATTCTCTCAGCACACACTGAGCCAAGTCACGGGCTGTGCACTTTCATCTTGCATCTCCTaGATTCAGCAATGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: AGDGFSQHTLSQVTGCALSSCIS*IQQWLD
Trigger: GTCCAACCATTGCTGAATCCAGGAGATGCAAGATGA...AAGTGCACAGCCCGTGACTTGGCTCAGTGTGTGCTGAGAGAATCCGTCCCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp GCCGGGGACGGATTCTCTCAGCACACACTGAGCCAAGTCACGGGCTGTGCACTTGCTCTGAAAGTCACCTaGGAAGTTTCCATAGTGTTC +
Preference number: 4 (lower is better)
Translates to: AGDGFSQHTLSQVTGCALALKVT*EVSIVF
Trigger: GAACACTATGGAAACTTCCCAGGTGACTTTCAGAGC...AAGTGCACAGCCCGTGACTTGGCTCAGTGTGTGCTGAGAGAATCCGTCCCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR TCA 90 bp GCCGGGGACGGATTCTCTCAGCACACACTGAGCCAAGTCACGGGCTGTGCACTTTTGAAACAACTGCTCTaGAAGTCACCTGGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: AGDGFSQHTLSQVTGCALLKQLL*KSPGKF
Trigger: AAACTTCCCAGGTGACTTTCAGAGCAGTTGTTTCAA...AAGTGCACAGCCCGTGACTTGGCTCAGTGTGTGCTGAGAGAATCCGTCCCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp ATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTGCTGAGCAGCACAAAGGCTaGACACCAGTGTGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: ILDSKAVWASDCQMPPAAEQHKG*TPVCRS
Trigger: ACTCCTGCACACTGGTGTGCAGCCTTTGTGCTGCTC...AGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTCTAGCATGTCCATGGTaGCGGGGACGGATTCTCTCA +
Preference number: 4 (lower is better)
Translates to: HILDSKAVWASDCQMPPALACPW*RGRILS
Trigger: TGAGAGAATCCGTCCCCGGCACCATGGACATGCTAG...AGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp ATTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGACCTCCAGCGGTGTTCTaGAGCCTCACACCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: IARCRLLLYLYVWDMWSGPPAVF*SLTPLA
Trigger: TGCTAGAGGTGTGAGGCTGCAGAACACCGCTGGAGG...TCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp GCAGTGAAACTGAGCAGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCCGCCGCAGCTGCGGCTaGCTTGGTGTGGGTTGCCTA +
Preference number: 4 (lower is better)
Translates to: AVKLSRNFQSISSAKSSFRRSCG*LGVGCL
Trigger: TAGGCAACCCACACCAAGGCAGCCGCAGCTGCGGCG...GAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCTGCTCAGTTTCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517781.5
CDS-3UTR CCA 90 bp TATGTAGCTCCTGCAGTATATGTACATATTAGGGCTGCAGTGAAACTGAGCAGGGGGAAGCGAGCCGCTTaGTTAGCACGTGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: YVAPAVYVHIRAAVKLSRGKRAA*LARGLG
Trigger: CCCCAGCCCACGTGCTAACCAAGCGGCTCGCTTCCC...CCTGCTCAGTTTCACTGCAGCCCTAATATGTACATATACTGCAGGAGCTACATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS-3UTR CCA 90 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTCAGGGGCCATGCTGGTaGTGCTTCCTTTCACCATGT +
Preference number: 4 (lower is better)
Translates to: HILDSKAVWASDCQMPPAQGPCW*CFLSPC
Trigger: ACATGGTGAAAGGAAGCACCACCAGCATGGCCCCTG...AGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR TCA 90 bp GCCGGGGACGGATTCTCTCAGCACACACTGAGCCAAGTCACGGGCTGTGCACTTAAACCTGTTAAGATCTaGCTGGCAGTCACAGAAATT +
Preference number: 4 (lower is better)
Translates to: AGDGFSQHTLSQVTGCALKPVKI*LAVTEI
Trigger: AATTTCTGTGACTGCCAGTCAGATCTTAACAGGTTT...AAGTGCACAGCCCGTGACTTGGCTCAGTGTGTGCTGAGAGAATCCGTCCCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp ACTGGGAACAGATACTGGGCAGAGCAGCACAAAGGCTGCACACCAGTGTGCAGGGCCTCATTGTCATCTTaGATCTCCTGGATTCAGCAA +
Preference number: 4 (lower is better)
Translates to: TGNRYWAEQHKGCTPVCRASLSS*ISWIQQ
Trigger: TTGCTGAATCCAGGAGATGCAAGATGACAATGAGGC...CCTGCACACTGGTGTGCAGCCTTTGTGCTGCTCTGCCCAGTATCTGTTCCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp GCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAGAGCAGCACAAAGGCTaGACACCAGTGTGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: ACCFIYMCGTCGVEKVYPEQHKG*TPVCRS
Trigger: ACTCCTGCACACTGGTGTGCAGCCTTTGTGCTGCTC...TGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp ATTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGACCAAGTCACGGGCTGTaGACTTACTCCTGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: IARCRLLLYLYVWDMWSGPSHGL*TYSCLH
Trigger: GTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGG...TCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp TGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCAAGTCACGGGCTGTaGACTTACTCCTGCCTTCAC +
Preference number: 4 (lower is better)
Translates to: CRLLLYLYVWDMWSGEGLPSHGL*TYSCLH
Trigger: GTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGG...TAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp TGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACTAGCATGTCCATGGTaGCGGGGACGGATTCTCTCA +
Preference number: 4 (lower is better)
Translates to: CRLLLYLYVWDMWSGEGLLACPW*RGRILS
Trigger: TGAGAGAATCCGTCCCCGGCACCATGGACATGCTAG...TAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp AGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTTTTGCCGAGACCGGCTaGGAGCGCCTGGCAGCTCTG +
Preference number: 4 (lower is better)
Translates to: RNFQSISSAKSSFIAQQCFAETG*ERLAAL
Trigger: CAGAGCTGCCAGGCGCTCCCAGCCGGTCTCGGCAAA...ACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS-3UTR CCA 90 bp TGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACGCTTGGTTAGCACGTaGGCTGGGGAAAAGTTTGCC +
Preference number: 4 (lower is better)
Translates to: CRLLLYLYVWDMWSGEGLRLVST*AGEKFA
Trigger: GGCAAACTTTTCCCCAGCCCACGTGCTAACCAAGCG...TAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS-3UTR CCA 90 bp ATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTGCTCTTCTCCTTCGCCTTTaGTGTTCTCTTCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ILDSKAVWASDCQMPPAALLLRL*CSLPSW
Trigger: CCAGGAGGGAAGAGAACACCAAAGGCGAAGGAGAAG...AGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp TGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACAGGGGCCATGCTGGTaGTGCTTCCTTTCACCATGT +
Preference number: 4 (lower is better)
Translates to: CRLLLYLYVWDMWSGEGLQGPCW*CFLSPC
Trigger: ACATGGTGAAAGGAAGCACCACCAGCATGGCCCCTG...TAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR TCA 90 bp TATGTAGCTCCTGCAGTATATGTACATATTAGGGCTGCAGTGAAACTGAGCAGGGGCAGTTTGGGCTTCTaGTTGCCAGATGCCGCCTGC +
Preference number: 4 (lower is better)
Translates to: YVAPAVYVHIRAAVKLSRGSLGF*LPDAAC
Trigger: GCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCC...CCTGCTCAGTTTCACTGCAGCCCTAATATGTACATATACTGCAGGAGCTACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR TCA 90 bp ATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTGCTTCTGTAGCTGGCCTGTaGAACTGGCTACAAGTGACT +
Preference number: 4 (lower is better)
Translates to: ILDSKAVWASDCQMPPAASVAGL*NWLQVT
Trigger: AGTCACTTGTAGCCAGTTTCACAGGCCAGCTACAGA...AGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR TCA 90 bp ACTGGGAACAGATACTGGGCAGAGCAGCACAAAGGCTGCACACCAGTGTGCAGGTTGAAACAACTGCTCTaGAAGTCACCTGGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: TGNRYWAEQHKGCTPVCRLKQLL*KSPGKF
Trigger: AAACTTCCCAGGTGACTTTCAGAGCAGTTGTTTCAA...CCTGCACACTGGTGTGCAGCCTTTGTGCTGCTCTGCCCAGTATCTGTTCCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp ATTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGATGCGTCTCCATCGGTTaGCTTGGCAGTGGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: IARCRLLLYLYVWDMWSGCVSIG*LGSGCN
Trigger: ATTACAGCCACTGCCAAGGCAACCGATGGAGACGCA...TCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000666252.1
CDS-3UTR GCA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCATGTGCGATTATTTCTaGTACAAGTTCCCCATTCGC +
Preference number: 4 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSMCDYF*YKFPIR
Trigger: GCGAATGGGGAACTTGTAGCAGAAATAATCGCACAT...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp TGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTAGGGCCATGCTGGTGGTaGTTCCTTTCACCATGTTAC +
Preference number: 4 (lower is better)
Translates to: CRLLLYLYVWDMWSGEGLGPCWW*FLSPCY
Trigger: GTAACATGGTGAAAGGAAGCACCACCAGCATGGCCC...TAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp TCCTCCAGCGGTGTTCTGCAGCCTCACACCTCTAGCATGTCCATGGTGCCGGGGTTTAAAGCCAGGGATTaGTTTAAATTTGGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: SSSGVLQPHTSSMSMVPGFKARD*FKFGGK
Trigger: TTTTCCCCCAAATTTAAAGCAATCCCTGGCTTTAAA...CCCCGGCACCATGGACATGCTAGAGGTGTGAGGCTGCAGAACACCGCTGGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp TGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTATGCATCCTCGCTTACTaGGTCTCCATCGGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: CRLLLYLYVWDMWSGEGLCILAY*VSIGCL
Trigger: AAGGCAACCGATGGAGACGCAGTAAGCGAGGATGCA...TAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517781.5
CDS-3UTR CCA 90 bp ATTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGACTTCTCCTTCGCCTTTaGTGTTCTCTTCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: IARCRLLLYLYVWDMWSGLLLRL*CSLPSW
Trigger: CCAGGAGGGAAGAGAACACCAAAGGCGAAGGAGAAG...TCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp GCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCACTTCTCCTTCGCCTTTaGTGTTCTCTTCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: ACCFIYMCGTCGVEKVYPLLLRL*CSLPSW
Trigger: CCAGGAGGGAAGAGAACACCAAAGGCGAAGGAGAAG...TGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTTATGTGTGGGACATGTaGAGTGGAGAAGGTCTACCC +
Preference number: 4 (lower is better)
Translates to: HILDSKAVWASDCQMPPAYVWDM*SGEGLP
Trigger: GGGTAGACCTTCTCCACTCCACATGTCCCACACATA...AGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR TCA 90 bp GCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAAATAAAGGTCACGAGTaGGTAGCGCATTGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: ACCFIYMCGTCGVEKVYPNKGHE*VAHCLP
Trigger: TGGCAGGCAATGCGCTACTCACTCGTGACCTTTATT...TGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR TCA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCAAACCTGTTAAGATCTaGCTGGCAGTCACAGAAATT +
Preference number: 4 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSKPVKI*LAVTEI
Trigger: AATTTCTGTGACTGCCAGTCAGATCTTAACAGGTTT...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp TGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTAATAACACAGGGGCCATaGTGGTGGTGCTTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: CRLLLYLYVWDMWSGEGLITQGP*WWCFLS
Trigger: TGAAAGGAAGCACCACCAGCATGGCCCCTGTGTTAT...TAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp ATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAATATGCAAACTCCCTCCAGCGGTGTTCTaGAGCCTCACACCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: IYMCGTCGVEKVYPICKLPPAVF*SLTPLA
Trigger: TGCTAGAGGTGTGAGGCTGCAGAACACCGCTGGAGG...GAGTTTGCATATTGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCAAGGTCTACCCAATATaGAAACTCTTTGACACTGGT +
Preference number: 4 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSKVYPI*KLFDTG
Trigger: ACCAGTGTCAAAGAGTTTGCATATTGGGTAGACCTT...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp GCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCATCAAAGTCTAGGAACTaGAGGGTTCGCCCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: ACCFIYMCGTCGVEKVYPSKSRN*RVRPKS
Trigger: GCTCTTTGGGCGAACCCTCCAGTTCCTAGACTTTGA...TGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000666252.1
CDS-3UTR CCA 90 bp GCCGGGGACGGATTCTCTCAGCACACACTGAGCCAAGTCACGGGCTGTGCACTTTATTGTGTCTTTCACTaGCTTTTTAACAATTTGCCG +
Preference number: 4 (lower is better)
Translates to: AGDGFSQHTLSQVTGCALYCVFH*LFNNLP
Trigger: CGGCAAATTGTTAAAAAGCCAGTGAAAGACACAATA...AAGTGCACAGCCCGTGACTTGGCTCAGTGTGTGCTGAGAGAATCCGTCCCCGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp GCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAACCAGTGTGCAGGAGTaGAGAGTAGCTTTGTGCACA +
Preference number: 4 (lower is better)
Translates to: ACCFIYMCGTCGVEKVYPTSVQE*RVALCT
Trigger: TGTGCACAAAGCTACTCTCCACTCCTGCACACTGGT...TGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp GCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCATATGTGTGGGACATGTaGAGTGGAGAAGGTCTACCC +
Preference number: 4 (lower is better)
Translates to: ACCFIYMCGTCGVEKVYPYVWDM*SGEGLP
Trigger: GGGTAGACCTTCTCCACTCCACATGTCCCACACATA...TGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp ATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTGCTGACTCAAAGGCAGTTTaGGCTTCTGATTGCCAGATG +
Preference number: 4 (lower is better)
Translates to: ILDSKAVWASDCQMPPAADSKAV*ASDCQM
Trigger: CATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTC...AGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR TCA 90 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTAAGAACAACTTCTGTTaGCATCGGCTACACCCATTG +
Preference number: 4 (lower is better)
Translates to: HILDSKAVWASDCQMPPAKNNFC*HRLHPL
Trigger: CAATGGGTGTAGCCGATGTCAACAGAAGTTGTTCTT...AGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517939.5
ENST00000666252.1
CDS-3UTR TCA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCAATATGCAAACTCTTTaGCACTGGTCATTTGACTCT +
Preference number: 4 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSNMQTL*HWSFDS
Trigger: AGAGTCAAATGACCAGTGTCAAAGAGTTTGCATATT...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp ACTGGGAACAGATACTGGGCAGAGCAGCACAAAGGCTGCACACCAGTGTGCAGGCACAGTTTTCTATTCTaGATCTTGCACATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: TGNRYWAEQHKGCTPVCRHSFLF*ILHICS
Trigger: TGAACAGATGTGCAAGATGCAGAATAGAAAACTGTG...CCTGCACACTGGTGTGCAGCCTTTGTGCTGCTCTGCCCAGTATCTGTTCCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp ATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTGCTTTCCCTCCTGGACAATaGCTCATTGTCATCTTGCAT +
Preference number: 4 (lower is better)
Translates to: ILDSKAVWASDCQMPPAAFPPGQ*LIVILH
Trigger: ATGCAAGATGACAATGAGGCATTGTCCAGGAGGGAA...AGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTTTCCCTCCTGGACAATaGCTCATTGTCATCTTGCAT +
Preference number: 4 (lower is better)
Translates to: HILDSKAVWASDCQMPPAFPPGQ*LIVILH
Trigger: ATGCAAGATGACAATGAGGCATTGTCCAGGAGGGAA...AGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp ATTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGACTGTGCACTTACTCCTaGCTTCACAGTCTCCAGATT +
Preference number: 4 (lower is better)
Translates to: IARCRLLLYLYVWDMWSGLCTYS*LHSLQI
Trigger: AATCTGGAGACTGTGAAGGCAGGAGTAAGTGCACAG...TCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp TGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACTGTGCACTTACTCCTaGCTTCACAGTCTCCAGATT +
Preference number: 4 (lower is better)
Translates to: CRLLLYLYVWDMWSGEGLLCTYS*LHSLQI
Trigger: AATCTGGAGACTGTGAAGGCAGGAGTAAGTGCACAG...TAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp ATTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGACTTCTGATTGCCAGATaGCGCCTGCTGCTTTATCTA +
Preference number: 4 (lower is better)
Translates to: IARCRLLLYLYVWDMWSGLLIAR*RLLLYL
Trigger: TAGATAAAGCAGCAGGCGGCATCTGGCAATCAGAAG...TCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp GCAGTGAAACTGAGCAGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCGTTTGGGCTTCTGATTaGCAGATGCCGCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: AVKLSRNFQSISSAKSSFVWASD*QMPPAA
Trigger: AGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAAC...GAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCTGCTCAGTTTCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp ATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTGCTTCATCTTGCATCTCCTaGATTCAGCAATGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: ILDSKAVWASDCQMPPAASSCIS*IQQWLD
Trigger: GTCCAACCATTGCTGAATCCAGGAGATGCAAGATGA...AGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTCTTTCACCATGTTACTaGGAACAGATACTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: HILDSKAVWASDCQMPPALSPCY*EQILGR
Trigger: TCTGCCCAGTATCTGTTCCCAGTAACATGGTGAAAG...AGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp TATGTAGCTCCTGCAGTATATGTACATATTAGGGCTGCAGTGAAACTGAGCAGGCAGGGGCCATGCTGGTaGTGCTTCCTTTCACCATGT +
Preference number: 4 (lower is better)
Translates to: YVAPAVYVHIRAAVKLSRQGPCW*CFLSPC
Trigger: ACATGGTGAAAGGAAGCACCACCAGCATGGCCCCTG...CCTGCTCAGTTTCACTGCAGCCCTAATATGTACATATACTGCAGGAGCTACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp GCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAGTGGGACATGTGGAGTaGAGAAGGTCTACCCAATAT +
Preference number: 4 (lower is better)
Translates to: ACCFIYMCGTCGVEKVYPVGHVE*RRSTQY
Trigger: ATATTGGGTAGACCTTCTCCACTCCACATGTCCCAC...TGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
3UTR CAA 72 bp GTTCTCTTCCCTCCTGGACAATGCCTCATTGTCATCTaGCATCTCCTGGATTCAGCAATGGTTGGACACAGT +
Preference number: 4 (lower is better)
Translates to: VLFPPGQCLIVI*HLLDSAMVGHS
Trigger: ACTGTGTCCAACCATTGCTGAATCCAGGAGATGCAAGATGACAATGAGGCATTGTCCAGGAGGGAAGAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666252.1
CDS-3UTR TCA 90 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTGTGAAGGTAACATGCTaGGAATACCATGTGGTAACA +
Preference number: 4 (lower is better)
Translates to: HILDSKAVWASDCQMPPAVKVTC*EYHVVT
Trigger: TGTTACCACATGGTATTCTCAGCATGTTACCTTCAC...AGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR TCA 90 bp TGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTAGAAACTGGCTACAAGTaGCTGGATATAGTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: CRLLLYLYVWDMWSGEGLETGYK*LDIVPH
Trigger: ATGAGGGACTATATCCAGTCACTTGTAGCCAGTTTC...TAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR TCA 90 bp GCAGTGAAACTGAGCAGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCTCTCCGCCACGAACCTaGGAGACAAGAAGCGAAAAC +
Preference number: 4 (lower is better)
Translates to: AVKLSRNFQSISSAKSSFSPPRT*ETRSEN
Trigger: GTTTTCGCTTCTTGTCTCTCAGGTTCGTGGCGGAGA...GAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCTGCTCAGTTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666252.1
CDS-3UTR GCA 90 bp ATTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGCCTCATTGTCATCTTaGATCTCCTGGATTCAGCAA +
Preference number: 4 (lower is better)
Translates to: IARCRLLLYLYVWDMWSGASLSS*ISWIQQ
Trigger: TTGCTGAATCCAGGAGATGCAAGATGACAATGAGGC...TCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp ATTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGATTCCCTCCTGGACAATaGCTCATTGTCATCTTGCAT +
Preference number: 4 (lower is better)
Translates to: IARCRLLLYLYVWDMWSGFPPGQ*LIVILH
Trigger: ATGCAAGATGACAATGAGGCATTGTCCAGGAGGGAA...TCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp AGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTCTAGCATGTCCATGGTaGCGGGGACGGATTCTCTCA +
Preference number: 4 (lower is better)
Translates to: RNFQSISSAKSSFIAQQCLACPW*RGRILS
Trigger: TGAGAGAATCCGTCCCCGGCACCATGGACATGCTAG...ACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp CTTCCACACATTCCATGGTTTCTTCTAATGGTGCAAAACCATCTGGACATTCATCCTCCAGCGGTGTTCTaGAGCCTCACACCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: LPHIPWFLLMVQNHLDIHPPAVF*SLTPLA
Trigger: TGCTAGAGGTGTGAGGCTGCAGAACACCGCTGGAGG...ATGAATGTCCAGATGGTTTTGCACCATTAGAAGAAACCATGGAATGTGTGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666252.1
CDS-3UTR GCA 90 bp TGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTATTGCCAGATGCCGCCTaGTGCTTTATCTATATGTGT +
Preference number: 4 (lower is better)
Translates to: CRLLLYLYVWDMWSGEGLLPDAA*CFIYMC
Trigger: ACACATATAGATAAAGCAGCAGGCGGCATCTGGCAA...TAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp AGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGTTTGGGCTTCTGATTaGCAGATGCCGCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: RNFQSISSAKSSFIAQQCVWASD*QMPPAA
Trigger: AGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAAC...ACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp ATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTGCTTCCTGGATTCAGCAATaGTTGGACACAGTATTGTGT +
Preference number: 4 (lower is better)
Translates to: ILDSKAVWASDCQMPPAASWIQQ*LDTVLC
Trigger: ACACAATACTGTGTCCAACCATTGCTGAATCCAGGA...AGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp TATGTAGCTCCTGCAGTATATGTACATATTAGGGCTGCAGTGAAACTGAGCAGGACGCTGTGTTGCTCCTaGGCCCTTTCTATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: YVAPAVYVHIRAAVKLSRTLCCS*ALSISF
Trigger: GAAGCTGATAGAAAGGGCCCAGGAGCAACACAGCGT...CCTGCTCAGTTTCACTGCAGCCCTAATATGTACATATACTGCAGGAGCTACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp GCAGTGAAACTGAGCAGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCACGCTGTGTTGCTCCTaGGCCCTTTCTATCAGCTTC +
Preference number: 4 (lower is better)
Translates to: AVKLSRNFQSISSAKSSFTLCCS*ALSISF
Trigger: GAAGCTGATAGAAAGGGCCCAGGAGCAACACAGCGT...GAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCTGCTCAGTTTCACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp AGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTCAGGGGCCATGCTGGTaGTGCTTCCTTTCACCATGT +
Preference number: 4 (lower is better)
Translates to: RNFQSISSAKSSFIAQQCQGPCW*CFLSPC
Trigger: ACATGGTGAAAGGAAGCACCACCAGCATGGCCCCTG...ACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAACCTCTAGCATGTCCATaGTGCCGGGGACGGATTCTC +
Preference number: 4 (lower is better)
Translates to: NFQSISSAKSSFIAQQCEPLACP*CRGRIL
Trigger: GAGAATCCGTCCCCGGCACCATGGACATGCTAGAGG...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp ATTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGCTCTGAAAGTCACCTaGGAAGTTTCCATAGTGTTC +
Preference number: 4 (lower is better)
Translates to: IARCRLLLYLYVWDMWSGALKVT*EVSIVF
Trigger: GAACACTATGGAAACTTCCCAGGTGACTTTCAGAGC...TCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp ATTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAATAACTAGCAGGGGGTaGTTCCAAGATGGCCAAATA +
Preference number: 4 (lower is better)
Translates to: IARCRLLLYLYVWDMWSGITSRG*FQDGQI
Trigger: TATTTGGCCATCTTGGAACCACCCCCTGCTAGTTAT...TCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000666252.1
CDS-3UTR TCA 90 bp AGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTCCCCATTCGCTCCAATaGCCAACTTCACATCCCACA +
Preference number: 4 (lower is better)
Translates to: RNFQSISSAKSSFIAQQCPHSLQ*PTSHPT
Trigger: TGTGGGATGTGAAGTTGGTCATTGGAGCGAATGGGG...ACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517781.5
CDS-3UTR GCA 90 bp TGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTAATGTGCGATTATTTCTaGTACAAGTTCCCCATTCGC +
Preference number: 4 (lower is better)
Translates to: CRLLLYLYVWDMWSGEGLMCDYF*YKFPIR
Trigger: GCGAATGGGGAACTTGTAGCAGAAATAATCGCACAT...TAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAAGAGCAGCACAAAGGCTaGACACCAGTGTGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: NFQSISSAKSSFIAQQCEEQHKG*TPVCRS
Trigger: ACTCCTGCACACTGGTGTGCAGCCTTTGTGCTGCTC...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp TATGTAGCTCCTGCAGTATATGTACATATTAGGGCTGCAGTGAAACTGAGCAGGATAACACAGGGGCCATaGTGGTGGTGCTTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: YVAPAVYVHIRAAVKLSRITQGP*WWCFLS
Trigger: TGAAAGGAAGCACCACCAGCATGGCCCCTGTGTTAT...CCTGCTCAGTTTCACTGCAGCCCTAATATGTACATATACTGCAGGAGCTACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTAAGGTCTACCCAATATaGAAACTCTTTGACACTGGT +
Preference number: 4 (lower is better)
Translates to: HILDSKAVWASDCQMPPAKVYPI*KLFDTG
Trigger: ACCAGTGTCAAAGAGTTTGCATATTGGGTAGACCTT...AGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp CATCCTTCCACACATTCCATGGTTTCTTCTAATGGTGCAAAACCATCTGGACATTCCAAGCTCGCTTACTaGGTCTCCATCGGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: HPSTHSMVSSNGAKPSGHSKLAY*VSIGCL
Trigger: AAGGCAACCGATGGAGACGCAGTAAGCGAGCTTGGA...ATGTCCAGATGGTTTTGCACCATTAGAAGAAACCATGGAATGTGTGGAAGGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666252.1
CDS-3UTR CCA 90 bp TGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTATCCTGGATTCAGCAATaGTTGGACACAGTATTGTGT +
Preference number: 4 (lower is better)
Translates to: CRLLLYLYVWDMWSGEGLSWIQQ*LDTVLC
Trigger: ACACAATACTGTGTCCAACCATTGCTGAATCCAGGA...TAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp AGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTCTTCTCCTTCGCCTTTaGTGTTCTCTTCCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RNFQSISSAKSSFIAQQCLLLRL*CSLPSW
Trigger: CCAGGAGGGAAGAGAACACCAAAGGCGAAGGAGAAG...ACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR TCA 90 bp AGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTTCTGTAGCTGGCCTGTaGAACTGGCTACAAGTGACT +
Preference number: 4 (lower is better)
Translates to: RNFQSISSAKSSFIAQQCSVAGL*NWLQVT
Trigger: AGTCACTTGTAGCCAGTTTCACAGGCCAGCTACAGA...ACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp ATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTGCTTTCTATTCTGCATCTTaGACATCTGTTCATATCTGG +
Preference number: 4 (lower is better)
Translates to: ILDSKAVWASDCQMPPAAFYSAS*TSVHIW
Trigger: CCAGATATGAACAGATGTGCAAGATGCAGAATAGAA...AGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp AGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTATAACACAGGGGCCATaGTGGTGGTGCTTCCTTTCA +
Preference number: 4 (lower is better)
Translates to: RNFQSISSAKSSFIAQQCITQGP*WWCFLS
Trigger: TGAAAGGAAGCACCACCAGCATGGCCCCTGTGTTAT...ACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp TATGTAGCTCCTGCAGTATATGTACATATTAGGGCTGCAGTGAAACTGAGCAGGCTTCTGATTGCCAGATaGCGCCTGCTGCTTTATCTA +
Preference number: 4 (lower is better)
Translates to: YVAPAVYVHIRAAVKLSRLLIAR*RLLLYL
Trigger: TAGATAAAGCAGCAGGCGGCATCTGGCAATCAGAAG...CCTGCTCAGTTTCACTGCAGCCCTAATATGTACATATACTGCAGGAGCTACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp CTTTTTAACAATTTGCCGTGTTCTGGTTTCCAGACCCCATTTAAATCCACATGTGTTTGGGCTTCTGATTaGCAGATGCCGCCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: LFNNLPCSGFQTPFKSTCVWASD*QMPPAA
Trigger: AGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAAC...ACATGTGGATTTAAATGGGGTCTGGAAACCAGAACACGGCAAATTGTTAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666252.1
CDS-3UTR CCA 90 bp AGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTTCAAAGTCTAGGAACTaGAGGGTTCGCCCAAAGAGC +
Preference number: 4 (lower is better)
Translates to: RNFQSISSAKSSFIAQQCSKSRN*RVRPKS
Trigger: GCTCTTTGGGCGAACCCTCCAGTTCCTAGACTTTGA...ACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000666252.1
CDS-3UTR CCA 90 bp GCAGTGAAACTGAGCAGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCGTGGGACATGTGGAGTaGAGAAGGTCTACCCAATAT +
Preference number: 4 (lower is better)
Translates to: AVKLSRNFQSISSAKSSFVGHVE*RRSTQY
Trigger: ATATTGGGTAGACCTTCTCCACTCCACATGTCCCAC...GAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCTGCTCAGTTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp GCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCACTTTATCTATATGTGTaGGACATGTGGAGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: ACCFIYMCGTCGVEKVYPLYLYV*DMWSGE
Trigger: TTCTCCACTCCACATGTCCCACACATATAGATAAAG...TGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp GCAGTGAAACTGAGCAGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCGACTCAAAGGCAGTTTaGGCTTCTGATTGCCAGATG +
Preference number: 4 (lower is better)
Translates to: AVKLSRNFQSISSAKSSFDSKAV*ASDCQM
Trigger: CATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTC...GAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCTGCTCAGTTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp ATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTGCTGTTCTAATTTTCTCCTaGATCAGCCAGGAAGATAAT +
Preference number: 4 (lower is better)
Translates to: ILDSKAVWASDCQMPPAAVLIFS*ISQEDN
Trigger: ATTATCTTCCTGGCTGATCCAGGAGAAAATTAGAAC...AGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTGTTCTAATTTTCTCCTaGATCAGCCAGGAAGATAAT +
Preference number: 4 (lower is better)
Translates to: HILDSKAVWASDCQMPPAVLIFS*ISQEDN
Trigger: ATTATCTTCCTGGCTGATCCAGGAGAAAATTAGAAC...AGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR TCA 90 bp GCAGTGAAACTGAGCAGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCAAGAACAACTTCTGTTaGCATCGGCTACACCCATTG +
Preference number: 4 (lower is better)
Translates to: AVKLSRNFQSISSAKSSFKNNFC*HRLHPL
Trigger: CAATGGGTGTAGCCGATGTCAACAGAAGTTGTTCTT...GAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCTGCTCAGTTTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517939.5
ENST00000666252.1
CDS-3UTR TCA 90 bp GCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAAATATGCAAACTCTTTaGCACTGGTCATTTGACTCT +
Preference number: 4 (lower is better)
Translates to: ACCFIYMCGTCGVEKVYPNMQTL*HWSFDS
Trigger: AGAGTCAAATGACCAGTGTCAAAGAGTTTGCATATT...TGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR TCA 90 bp CATCCTTCCACACATTCCATGGTTTCTTCTAATGGTGCAAAACCATCTGGACATGGAGCAGAAGATGGGTaGTTTCTGCATTTCCAACTG +
Preference number: 4 (lower is better)
Translates to: HPSTHSMVSSNGAKPSGHGAEDG*FLHFQL
Trigger: CAGTTGGAAATGCAGAAATCACCCATCTTCTGCTCC...ATGTCCAGATGGTTTTGCACCATTAGAAGAAACCATGGAATGTGTGGAAGGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666252.1
CDS-3UTR GCA 90 bp GCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCATTCTATTCTGCATCTTaGACATCTGTTCATATCTGG +
Preference number: 4 (lower is better)
Translates to: ACCFIYMCGTCGVEKVYPFYSAS*TSVHIW
Trigger: CCAGATATGAACAGATGTGCAAGATGCAGAATAGAA...TGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp TGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACACAGTTTTCTATTCTaGATCTTGCACATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: CRLLLYLYVWDMWSGEGLHSFLF*ILHICS
Trigger: TGAACAGATGTGCAAGATGCAGAATAGAAAACTGTG...TAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp ATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAATATGCAAACTCGCCTCATTGTCATCTTaGATCTCCTGGATTCAGCAA +
Preference number: 4 (lower is better)
Translates to: IYMCGTCGVEKVYPICKLASLSS*ISWIQQ
Trigger: TTGCTGAATCCAGGAGATGCAAGATGACAATGAGGC...GAGTTTGCATATTGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp TATGTAGCTCCTGCAGTATATGTACATATTAGGGCTGCAGTGAAACTGAGCAGGGCCTCATTGTCATCTTaGATCTCCTGGATTCAGCAA +
Preference number: 4 (lower is better)
Translates to: YVAPAVYVHIRAAVKLSRASLSS*ISWIQQ
Trigger: TTGCTGAATCCAGGAGATGCAAGATGACAATGAGGC...CCTGCTCAGTTTCACTGCAGCCCTAATATGTACATATACTGCAGGAGCTACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp TATGTAGCTCCTGCAGTATATGTACATATTAGGGCTGCAGTGAAACTGAGCAGGTTCCCTCCTGGACAATaGCTCATTGTCATCTTGCAT +
Preference number: 4 (lower is better)
Translates to: YVAPAVYVHIRAAVKLSRFPPGQ*LIVILH
Trigger: ATGCAAGATGACAATGAGGCATTGTCCAGGAGGGAA...CCTGCTCAGTTTCACTGCAGCCCTAATATGTACATATACTGCAGGAGCTACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp AGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTCAGCGCGGGAATTGCTaGTTAATTCAGAAAGTTCCC +
Preference number: 4 (lower is better)
Translates to: RNFQSISSAKSSFIAQQCQRGNC*LIQKVP
Trigger: GGGAACTTTCTGAATTAAGCAGCAATTCCCGCGCTG...ACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517939.5
CDS-3UTR CCA 90 bp ATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAATATGCAAACTCTCATCTTGCATCTCCTaGATTCAGCAATGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: IYMCGTCGVEKVYPICKLSSCIS*IQQWLD
Trigger: GTCCAACCATTGCTGAATCCAGGAGATGCAAGATGA...GAGTTTGCATATTGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp ATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAATATGCAAACTCCTTTCACCATGTTACTaGGAACAGATACTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: IYMCGTCGVEKVYPICKLLSPCY*EQILGR
Trigger: TCTGCCCAGTATCTGTTCCCAGTAACATGGTGAAAG...GAGTTTGCATATTGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp AGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGACTCAAAGGCAGTTTaGGCTTCTGATTGCCAGATG +
Preference number: 4 (lower is better)
Translates to: RNFQSISSAKSSFIAQQCDSKAV*ASDCQM
Trigger: CATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTC...ACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp TGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTAGTTCTAATTTTCTCCTaGATCAGCCAGGAAGATAAT +
Preference number: 4 (lower is better)
Translates to: CRLLLYLYVWDMWSGEGLVLIFS*ISQEDN
Trigger: ATTATCTTCCTGGCTGATCCAGGAGAAAATTAGAAC...TAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp ATTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGTTCTAATTTTCTCCTaGATCAGCCAGGAAGATAAT +
Preference number: 4 (lower is better)
Translates to: IARCRLLLYLYVWDMWSGVLIFS*ISQEDN
Trigger: ATTATCTTCCTGGCTGATCCAGGAGAAAATTAGAAC...TCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR TCA 90 bp ATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAATATGCAAACTCGTGAAGGTAACATGCTaGGAATACCATGTGGTAACA +
Preference number: 4 (lower is better)
Translates to: IYMCGTCGVEKVYPICKLVKVTC*EYHVVT
Trigger: TGTTACCACATGGTATTCTCAGCATGTTACCTTCAC...GAGTTTGCATATTGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR TCA 90 bp TATGTAGCTCCTGCAGTATATGTACATATTAGGGCTGCAGTGAAACTGAGCAGGTTGAAACAACTGCTCTaGAAGTCACCTGGGAAGTTT +
Preference number: 4 (lower is better)
Translates to: YVAPAVYVHIRAAVKLSRLKQLL*KSPGKF
Trigger: AAACTTCCCAGGTGACTTTCAGAGCAGTTGTTTCAA...CCTGCTCAGTTTCACTGCAGCCCTAATATGTACATATACTGCAGGAGCTACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR TCA 90 bp GCAGTGAAACTGAGCAGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCGGTGATTATAATCAGTaGATTAGCAACCTCTGCCGA +
Preference number: 4 (lower is better)
Translates to: AVKLSRNFQSISSAKSSFGDYNQ*ISNLCR
Trigger: TCGGCAGAGGTTGCTAATTCACTGATTATAATCACC...GAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCTGCTCAGTTTCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517781.5
CDS-3UTR GCA 90 bp GCAGTGAAACTGAGCAGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATGTGCGATTATTTCTaGTACAAGTTCCCCATTCGC +
Preference number: 4 (lower is better)
Translates to: AVKLSRNFQSISSAKSSFMCDYF*YKFPIR
Trigger: GCGAATGGGGAACTTGTAGCAGAAATAATCGCACAT...GAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCTGCTCAGTTTCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp GCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCATGGAGAGTAGCTTTGTaGACATTTGCAAAAACAAAA +
Preference number: 4 (lower is better)
Translates to: ACCFIYMCGTCGVEKVYPWRVAL*TFAKTK
Trigger: TTTTGTTTTTGCAAATGTGCACAAAGCTACTCTCCA...TGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp TGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTATGGAGAGTAGCTTTGTaGACATTTGCAAAAACAAAA +
Preference number: 4 (lower is better)
Translates to: CRLLLYLYVWDMWSGEGLWRVAL*TFAKTK
Trigger: TTTTGTTTTTGCAAATGTGCACAAAGCTACTCTCCA...TAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp ATAAAAGCCTACTTTGCACTTGGTACAAAAGTCTTTGCTAAAGCAAGAATCACAGAGCAGCACAAAGGCTaGACACCAGTGTGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: IKAYFALGTKVFAKARITEQHKG*TPVCRS
Trigger: ACTCCTGCACACTGGTGTGCAGCCTTTGTGCTGCTC...TGTGATTCTTGCTTTAGCAAAGACTTTTGTACCAAGTGCAAAGTAGGCTTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666252.1
CDS-3UTR GCA 90 bp AGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTTTGCCAGATGCCGCCTaGTGCTTTATCTATATGTGT +
Preference number: 4 (lower is better)
Translates to: RNFQSISSAKSSFIAQQCLPDAA*CFIYMC
Trigger: ACACATATAGATAAAGCAGCAGGCGGCATCTGGCAA...ACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp TGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTATTTAAAGCCAGGGATTaGTTTAAATTTGGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: CRLLLYLYVWDMWSGEGLFKARD*FKFGGK
Trigger: TTTTCCCCCAAATTTAAAGCAATCCCTGGCTTTAAA...TAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp CATCCTTCCACACATTCCATGGTTTCTTCTAATGGTGCAAAACCATCTGGACATGCTCTGAAAGTCACCTaGGAAGTTTCCATAGTGTTC +
Preference number: 4 (lower is better)
Translates to: HPSTHSMVSSNGAKPSGHALKVT*EVSIVF
Trigger: GAACACTATGGAAACTTCCCAGGTGACTTTCAGAGC...ATGTCCAGATGGTTTTGCACCATTAGAAGAAACCATGGAATGTGTGGAAGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666252.1
CDS-3UTR TCA 90 bp CTTCCACACATTCCATGGTTTCTTCTAATGGTGCAAAACCATCTGGACATTCATGAAACTGGCTACAAGTaGCTGGATATAGTCCCTCAT +
Preference number: 4 (lower is better)
Translates to: LPHIPWFLLMVQNHLDIHETGYK*LDIVPH
Trigger: ATGAGGGACTATATCCAGTCACTTGTAGCCAGTTTC...ATGAATGTCCAGATGGTTTTGCACCATTAGAAGAAACCATGGAATGTGTGGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666252.1
CDS-3UTR TCA 90 bp GCAGTGAAACTGAGCAGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCAAACCTGTTAAGATCTaGCTGGCAGTCACAGAAATT +
Preference number: 4 (lower is better)
Translates to: AVKLSRNFQSISSAKSSFKPVKI*LAVTEI
Trigger: AATTTCTGTGACTGCCAGTCAGATCTTAACAGGTTT...GAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCTGCTCAGTTTCACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp GCAGTGAAACTGAGCAGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCAAGGTCTACCCAATATaGAAACTCTTTGACACTGGT +
Preference number: 4 (lower is better)
Translates to: AVKLSRNFQSISSAKSSFKVYPI*KLFDTG
Trigger: ACCAGTGTCAAAGAGTTTGCATATTGGGTAGACCTT...GAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCTGCTCAGTTTCACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp TATGTAGCTCCTGCAGTATATGTACATATTAGGGCTGCAGTGAAACTGAGCAGGCTTCCACACATTCCATaGTTTCTTCTAATGGTGCAA +
Preference number: 4 (lower is better)
Translates to: YVAPAVYVHIRAAVKLSRLPHIP*FLLMVQ
Trigger: TTGCACCATTAGAAGAAACCATGGAATGTGTGGAAG...CCTGCTCAGTTTCACTGCAGCCCTAATATGTACATATACTGCAGGAGCTACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp AGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTTCCTGGATTCAGCAATaGTTGGACACAGTATTGTGT +
Preference number: 4 (lower is better)
Translates to: RNFQSISSAKSSFIAQQCSWIQQ*LDTVLC
Trigger: ACACAATACTGTGTCCAACCATTGCTGAATCCAGGA...ACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAACTTTCACCATGTTACTaGGAACAGATACTGGGCAGA +
Preference number: 4 (lower is better)
Translates to: NFQSISSAKSSFIAQQCELSPCY*EQILGR
Trigger: TCTGCCCAGTATCTGTTCCCAGTAACATGGTGAAAG...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp GCAGTGAAACTGAGCAGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCCTTTATCTATATGTGTaGGACATGTGGAGTGGAGAA +
Preference number: 4 (lower is better)
Translates to: AVKLSRNFQSISSAKSSFLYLYV*DMWSGE
Trigger: TTCTCCACTCCACATGTCCCACACATATAGATAAAG...GAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCTGCTCAGTTTCACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp TATGTAGCTCCTGCAGTATATGTACATATTAGGGCTGCAGTGAAACTGAGCAGGCTGTTAAGATCTGACTaGCAGTCACAGAAATTCATC +
Preference number: 4 (lower is better)
Translates to: YVAPAVYVHIRAAVKLSRLLRSD*QSQKFI
Trigger: GATGAATTTCTGTGACTGCCAGTCAGATCTTAACAG...CCTGCTCAGTTTCACTGCAGCCCTAATATGTACATATACTGCAGGAGCTACATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp GCAGTGAAACTGAGCAGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCCTGTTAAGATCTGACTaGCAGTCACAGAAATTCATC +
Preference number: 4 (lower is better)
Translates to: AVKLSRNFQSISSAKSSFLLRSD*QSQKFI
Trigger: GATGAATTTCTGTGACTGCCAGTCAGATCTTAACAG...GAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCTGCTCAGTTTCACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp ATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAATATGCAAACTCCTGTTAAGATCTGACTaGCAGTCACAGAAATTCATC +
Preference number: 4 (lower is better)
Translates to: IYMCGTCGVEKVYPICKLLLRSD*QSQKFI
Trigger: GATGAATTTCTGTGACTGCCAGTCAGATCTTAACAG...GAGTTTGCATATTGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp GCAGTGAAACTGAGCAGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCCCACACATTCCATaGTTTCTTCTAATGGTGCAA +
Preference number: 4 (lower is better)
Translates to: AVKLSRNFQSISSAKSSFIPHIP*FLLMVQ
Trigger: TTGCACCATTAGAAGAAACCATGGAATGTGTGGGAT...GAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCTGCTCAGTTTCACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517781.5
CDS-3UTR CCA 90 bp CTTTTTAACAATTTGCCGTGTTCTGGTTTCCAGACCCCATTTAAATCCACATGTGGTCGGAGCAGAAGATaGGTGATTTCTGCATTTCCA +
Preference number: 4 (lower is better)
Translates to: LFNNLPCSGFQTPFKSTCGRSRR*VISAFP
Trigger: TGGAAATGCAGAAATCACCCATCTTCTGCTCCGACC...ACATGTGGATTTAAATGGGGTCTGGAAACCAGAACACGGCAAATTGTTAAAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666252.1
CDS-3UTR TCA 90 bp GCAGTGAAACTGAGCAGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCAATATGCAAACTCTTTaGCACTGGTCATTTGACTCT +
Preference number: 4 (lower is better)
Translates to: AVKLSRNFQSISSAKSSFNMQTL*HWSFDS
Trigger: AGAGTCAAATGACCAGTGTCAAAGAGTTTGCATATT...GAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCTGCTCAGTTTCACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp GACATGAAAGGAGGTAACACTTCAGGATTAAATGTAAACCCTAAAGTTGTATACAATTGTGTCGCTTCCTaGGCTTTCTCCACGGTCACT +
Preference number: 4 (lower is better)
Translates to: DMKGGNTSGLNVNPKVVYNCVAS*AFSTVT
Trigger: AGTGACCGTGGAGAAAGCGCAGGAAGCGACACAATT...GTATACAACTTTAGGGTTTACATTTAATCCTGAAGTGTTACCTCCTTTCATGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS-3UTR GCA 90 bp CATCCTTCCACACATTCCATGGTTTCTTCTAATGGTGCAAAACCATCTGGACATAAGGTCTACCCAATATaGAAACTCTTTGACACTGGT +
Preference number: 4 (lower is better)
Translates to: HPSTHSMVSSNGAKPSGHKVYPI*KLFDTG
Trigger: ACCAGTGTCAAAGAGTTTGCATATTGGGTAGACCTT...ATGTCCAGATGGTTTTGCACCATTAGAAGAAACCATGGAATGTGTGGAAGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000666252.1
CDS-3UTR GCA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAAAACCAGCGCGGGAATTaGTGCTTAATTCAGAAAGTT +
Preference number: 4 (lower is better)
Translates to: NFQSISSAKSSFIAQQCENQRGN*CLIQKV
Trigger: AACTTTCTGAATTAAGCAGCAATTCCCGCGCTGGTT...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517939.5
CDS-3UTR CCA 90 bp ATAAAAGCCTACTTTGCACTTGGTACAAAAGTCTTTGCTAAAGCAAGAATCACAACCAGTGTGCAGGAGTaGAGAGTAGCTTTGTGCACA +
Preference number: 4 (lower is better)
Translates to: IKAYFALGTKVFAKARITTSVQE*RVALCT
Trigger: TGTGCACAAAGCTACTCTCCACTCCTGCACACTGGT...TGTGATTCTTGCTTTAGCAAAGACTTTTGTACCAAGTGCAAAGTAGGCTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666252.1
CDS-3UTR TCA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAAAAACCTGTTAAGATCTaGCTGGCAGTCACAGAAATT +
Preference number: 4 (lower is better)
Translates to: NFQSISSAKSSFIAQQCEKPVKI*LAVTEI
Trigger: AATTTCTGTGACTGCCAGTCAGATCTTAACAGGTTT...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp CATCCTTCCACACATTCCATGGTTTCTTCTAATGGTGCAAAACCATCTGGACATCACAGTTTTCTATTCTaGATCTTGCACATCTGTTCA +
Preference number: 4 (lower is better)
Translates to: HPSTHSMVSSNGAKPSGHHSFLF*ILHICS
Trigger: TGAACAGATGTGCAAGATGCAGAATAGAAAACTGTG...ATGTCCAGATGGTTTTGCACCATTAGAAGAAACCATGGAATGTGTGGAAGGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666252.1
CDS-3UTR GCA 90 bp TATGTAGCTCCTGCAGTATATGTACATATTAGGGCTGCAGTGAAACTGAGCAGGTGGAGAGTAGCTTTGTaGACATTTGCAAAAACAAAA +
Preference number: 4 (lower is better)
Translates to: YVAPAVYVHIRAAVKLSRWRVAL*TFAKTK
Trigger: TTTTGTTTTTGCAAATGTGCACAAAGCTACTCTCCA...CCTGCTCAGTTTCACTGCAGCCCTAATATGTACATATACTGCAGGAGCTACATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp GCAGTGAAACTGAGCAGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCTTTAAAGCCAGGGATTaGTTTAAATTTGGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: AVKLSRNFQSISSAKSSFFKARD*FKFGGK
Trigger: TTTTCCCCCAAATTTAAAGCAATCCCTGGCTTTAAA...GAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCTGCTCAGTTTCACTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp TATGTAGCTCCTGCAGTATATGTACATATTAGGGCTGCAGTGAAACTGAGCAGGTATTGTGTCTTTCACTaGCTTTTTAACAATTTGCCG +
Preference number: 4 (lower is better)
Translates to: YVAPAVYVHIRAAVKLSRYCVFH*LFNNLP
Trigger: CGGCAAATTGTTAAAAAGCCAGTGAAAGACACAATA...CCTGCTCAGTTTCACTGCAGCCCTAATATGTACATATACTGCAGGAGCTACATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp ATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAATATGCAAACTCTATTGTGTCTTTCACTaGCTTTTTAACAATTTGCCG +
Preference number: 4 (lower is better)
Translates to: IYMCGTCGVEKVYPICKLYCVFH*LFNNLP
Trigger: CGGCAAATTGTTAAAAAGCCAGTGAAAGACACAATA...GAGTTTGCATATTGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp GACATGAAAGGAGGTAACACTTCAGGATTAAATGTAAACCCTAAAGTTGTATACTTGCCAGATGCCGCCTaGTGCTTTATCTATATGTGT +
Preference number: 4 (lower is better)
Translates to: DMKGGNTSGLNVNPKVVYLPDAA*CFIYMC
Trigger: ACACATATAGATAAAGCAGCAGGCGGCATCTGGCAA...GTATACAACTTTAGGGTTTACATTTAATCCTGAAGTGTTACCTCCTTTCATGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp CTTTTTAACAATTTGCCGTGTTCTGGTTTCCAGACCCCATTTAAATCCACATGTCTGTTAAGATCTGACTaGCAGTCACAGAAATTCATC +
Preference number: 4 (lower is better)
Translates to: LFNNLPCSGFQTPFKSTCLLRSD*QSQKFI
Trigger: GATGAATTTCTGTGACTGCCAGTCAGATCTTAACAG...ACATGTGGATTTAAATGGGGTCTGGAAACCAGAACACGGCAAATTGTTAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000666252.1
CDS-3UTR CCA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAATATTGTGTCTTTCACTaGCTTTTTAACAATTTGCCG +
Preference number: 4 (lower is better)
Translates to: NFQSISSAKSSFIAQQCEYCVFH*LFNNLP
Trigger: CGGCAAATTGTTAAAAAGCCAGTGAAAGACACAATA...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CCA 90 bp GACATGAAAGGAGGTAACACTTCAGGATTAAATGTAAACCCTAAAGTTGTATACTCCTGGATTCAGCAATaGTTGGACACAGTATTGTGT +
Preference number: 4 (lower is better)
Translates to: DMKGGNTSGLNVNPKVVYSWIQQ*LDTVLC
Trigger: ACACAATACTGTGTCCAACCATTGCTGAATCCAGGA...GTATACAACTTTAGGGTTTACATTTAATCCTGAAGTGTTACCTCCTTTCATGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp CTTTTTAACAATTTGCCGTGTTCTGGTTTCCAGACCCCATTTAAATCCACATGTTTTAAAGCCAGGGATTaGTTTAAATTTGGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: LFNNLPCSGFQTPFKSTCFKARD*FKFGGK
Trigger: TTTTCCCCCAAATTTAAAGCAATCCCTGGCTTTAAA...ACATGTGGATTTAAATGGGGTCTGGAAACCAGAACACGGCAAATTGTTAAAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000666252.1
CDS-3UTR CCA 90 bp GACATGAAAGGAGGTAACACTTCAGGATTAAATGTAAACCCTAAAGTTGTATACCTTCCACACATTCCATaGTTTCTTCTAATGGTGCAA +
Preference number: 4 (lower is better)
Translates to: DMKGGNTSGLNVNPKVVYLPHIP*FLLMVQ
Trigger: TTGCACCATTAGAAGAAACCATGGAATGTGTGGAAG...GTATACAACTTTAGGGTTTACATTTAATCCTGAAGTGTTACCTCCTTTCATGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517939.5
ENST00000666252.1
CDS-3UTR GCA 90 bp GACATGAAAGGAGGTAACACTTCAGGATTAAATGTAAACCCTAAAGTTGTATACTTCTATTCTGCATCTTaGACATCTGTTCATATCTGG +
Preference number: 4 (lower is better)
Translates to: DMKGGNTSGLNVNPKVVYFYSAS*TSVHIW
Trigger: CCAGATATGAACAGATGTGCAAGATGCAGAATAGAA...GTATACAACTTTAGGGTTTACATTTAATCCTGAAGTGTTACCTCCTTTCATGTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517939.5
ENST00000666252.1
CDS CCA 90 bp GGTTGGCGACGCCAGGCAGGAGCGCGGAGCGGCGGGTGCAGCCACTaGGATGCTCCGTCCCCGCCCGCGAGCGCGGTCCCCAGGCAAGGG +
Preference number: 5 (lower is better)
Translates to: GWRRQAGARSGGCSH*DAPSPPASAVPRQG
Trigger: CCCTTGCCTGGGGACCGCGCTCGCGGGCGGGGACGGAGCATCCCAGTGGCTGCACCCGCCGCTCCGCGCTCCTGCCTGGCGTCGCCAACC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS CCA 90 bp AGGAACTGGAGGGTTCGCCCAAAGAGCCGGCGCCGGCCGCGCTGCTaGGGAGGACTCAGAGGGAGACTCGCCACTCACCCCCGGGCCGCA +
Preference number: 5 (lower is better)
Translates to: RNWRVRPKSRRRPRC*GGLRGRLATHPRAA
Trigger: TGCGGCCCGGGGGTGAGTGGCGAGTCTCCCTCTGAGTCCTCCCCAGCAGCGCGGCCGGCGCCGGCTCTTTGGGCGAACCCTCCAGTTCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000521956.5
ENST00000522333.1
ENST00000666252.1
CDS GCA 90 bp TCTAGGAACTGGAGGGTTCGCCCAAAGAGCCGGCGCCGGCCGCGCTaGTGGGGAGGACTCAGAGGGAGACTCGCCACTCACCCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: SRNWRVRPKSRRRPR*WGGLRGRLATHPRA
Trigger: GGCCCGGGGGTGAGTGGCGAGTCTCCCTCTGAGTCCTCCCCAGCAGCGCGGCCGGCGCCGGCTCTTTGGGCGAACCCTCCAGTTCCTAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000521956.5
ENST00000522333.1
ENST00000666252.1
CDS CCA 90 bp GGTGCTCCATCCCGGGCTCGGGAAGCGAGCCGCTTGGTTAGCACGTaGGCTGGGGAAAAGTTTGCCGAGACCGGCTGGGAGCGCCTGGCA +
Preference number: 5 (lower is better)
Translates to: GAPSRAREASRLVST*AGEKFAETGWERLA
Trigger: TGCCAGGCGCTCCCAGCCGGTCTCGGCAAACTTTTCCCCAGCCCACGTGCTAACCAAGCGGCTCGCTTCCCGAGCCCGGGATGGAGCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS CCA 90 bp TCCCTAGGCGCGGTGCTCCATCCCGGGCTCGGGAAGCGAGCCGCTTaGTTAGCACGTGGGCTGGGGAAAAGTTTGCCGAGACCGGCTGGG +
Preference number: 5 (lower is better)
Translates to: SLGAVLHPGLGKRAA*LARGLGKSLPRPAG
Trigger: CCCAGCCGGTCTCGGCAAACTTTTCCCCAGCCCACGTGCTAACCAAGCGGCTCGCTTCCCGAGCCCGGGATGGAGCACCGCGCCTAGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS GCA 90 bp CGCGAGCGCGGTCCCCAGGCAAGGGGTGCGCCCGCTCACACTCTCTaGCTCCCTAACCAATTGTGTCGCTTCCTGCGCTTTCTCCACGGT +
Preference number: 5 (lower is better)
Translates to: RERGPQARGAPAHTL*LPNQLCRFLRFLHG
Trigger: ACCGTGGAGAAAGCGCAGGAAGCGACACAATTGGTTAGGGAGGCAGAGAGTGTGAGCGGGCGCACCCCTTGCCTGGGGACCGCGCTCGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS-3UTR CAA 90 bp GCCGGGGACGGATTCTCTCAGCACACACTGAGCCAAGTCACGGGCTGTGCACTTCAGCGGCATAATGCGTaGTGCCGGCGCTCCGGGGAA +
Preference number: 5 (lower is better)
Translates to: AGDGFSQHTLSQVTGCALQRHNA*CRRSGE
Trigger: TTCCCCGGAGCGCCGGCACAACGCATTATGCCGCTG...AAGTGCACAGCCCGTGACTTGGCTCAGTGTGTGCTGAGAGAATCCGTCCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517781.5
CDS TCA 90 bp GCGGGCAGCTGCGGACGAGTTGGAGAGGAAGGTGATTATAATCAGTaGATTAGCAACCTCTGCCGAGCCCTAAGCTCCGACCCAGCGGCA +
Preference number: 5 (lower is better)
Translates to: AGSCGRVGEEGDYNQ*ISNLCRALSSDPAA
Trigger: TGCCGCTGGGTCGGAGCTTAGGGCTCGGCAGAGGTTGCTAATTCACTGATTATAATCACCTTCCTCTCCAACTCGTCCGCAGCTGCCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517781.5
CDS-3UTR CAA 90 bp GCCGGGGACGGATTCTCTCAGCACACACTGAGCCAAGTCACGGGCTGTGCACTTTCTCCATCGGTTGCCTaGGCAGTGGCTGTAATCCAT +
Preference number: 5 (lower is better)
Translates to: AGDGFSQHTLSQVTGCALSPSVA*AVAVIH
Trigger: ATGGATTACAGCCACTGCCAAGGCAACCGATGGAGA...AAGTGCACAGCCCGTGACTTGGCTCAGTGTGTGCTGAGAGAATCCGTCCCCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000666252.1
CDS-3UTR CAA 90 bp TCCTCCAGCGGTGTTCTGCAGCCTCACACCTCTAGCATGTCCATGGTGCCGGGGTGCCTCATTGTCATCTaGCATCTCCTGGATTCAGCA +
Preference number: 5 (lower is better)
Translates to: SSSGVLQPHTSSMSMVPGCLIVI*HLLDSA
Trigger: TGCTGAATCCAGGAGATGCAAGATGACAATGAGGCA...CCCCGGCACCATGGACATGCTAGAGGTGTGAGGCTGCAGAACACCGCTGGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp ATTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGCAGCTGCGGCTGCCTaGGTGTGGGTTGCCTACCGT +
Preference number: 5 (lower is better)
Translates to: IARCRLLLYLYVWDMWSGAAAAA*VWVAYR
Trigger: ACGGTAGGCAACCCACACCAAGGCAGCCGCAGCTGC...TCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517781.5
CDS TCA 90 bp TTCTTTCCGAGCTGTAGAAGGCAGAACGCTCTCGGGAGGACGAAGTaGTCCGAAGGGATGTGGCAAGCGCACTTTCCGATGGAGATGCAG +
Preference number: 5 (lower is better)
Translates to: FFPSCRRQNALGRTK*SEGMWQAHFPMEMQ
Trigger: CTGCATCTCCATCGGAAAGTGCGCTTGCCACATCCCTTCGGATCACTTCGTCCTCCCGAGAGCGTTCTGCCTTCTACAGCTCGGAAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276659.10
ENST00000522333.1
CDS GCA 90 bp TCCATGCAGTTCAGAATGATGAGGGCAAAGGAGAAAAGGCGAAACTaGATCTGGGCGGTCGGGCGGGGGAGAGACGCCTCTCAAAGTCTA +
Preference number: 5 (lower is better)
Translates to: SMQFRMMRAKEKRRN*IWAVGRGRDASQSL
Trigger: TAGACTTTGAGAGGCGTCTCTCCCCCGCCCGACCGCCCAGATGCAGTTTCGCCTTTTCTCCTTTGCCCTCATCATTCTGAACTGCATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000521956.5
ENST00000522333.1
ENST00000666252.1
CDS-3UTR CAA 90 bp GCAGTGAAACTGAGCAGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCCGGGAAGCGAGCCGCTaGGTTAGCACGTGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: AVKLSRNFQSISSAKSSFREASR*VSTWAG
Trigger: CCCAGCCCACGTGCTAACCAAGCGGCTCGCTTCCCG...GAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCTGCTCAGTTTCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS-3UTR CAA 90 bp GCCGGGGACGGATTCTCTCAGCACACACTGAGCCAAGTCACGGGCTGTGCACTTGAAGAACAACTTCTGTaGACATCGGCTACACCCATT +
Preference number: 5 (lower is better)
Translates to: AGDGFSQHTLSQVTGCALEEQLL*TSATPI
Trigger: AATGGGTGTAGCCGATGTCAACAGAAGTTGTTCTTC...AAGTGCACAGCCCGTGACTTGGCTCAGTGTGTGCTGAGAGAATCCGTCCCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp ACTGGGAACAGATACTGGGCAGAGCAGCACAAAGGCTGCACACCAGTGTGCAGGCTGGACAATGCCTCATaGTCATCTTGCATCTCCTGG +
Preference number: 5 (lower is better)
Translates to: TGNRYWAEQHKGCTPVCRLDNAS*SSCISW
Trigger: CCAGGAGATGCAAGATGACAATGAGGCATTGTCCAG...CCTGCACACTGGTGTGCAGCCTTTGTGCTGCTCTGCCCAGTATCTGTTCCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp GCCGGGGACGGATTCTCTCAGCACACACTGAGCCAAGTCACGGGCTGTGCACTTTGGATTCAGCAATGGTaGGACACAGTATTGTGTCTT +
Preference number: 5 (lower is better)
Translates to: AGDGFSQHTLSQVTGCALWIQQW*DTVLCL
Trigger: AAGACACAATACTGTGTCCAACCATTGCTGAATCCA...AAGTGCACAGCCCGTGACTTGGCTCAGTGTGTGCTGAGAGAATCCGTCCCCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp TCCTCCAGCGGTGTTCTGCAGCCTCACACCTCTAGCATGTCCATGGTGCCGGGGAGGCTTTACCTTGCTTaGTTTCAAAATCCACAACCA +
Preference number: 5 (lower is better)
Translates to: SSSGVLQPHTSSMSMVPGRLYLA*FQNPQP
Trigger: TGGTTGTGGATTTTGAAACAAAGCAAGGTAAAGCCT...CCCCGGCACCATGGACATGCTAGAGGTGTGAGGCTGCAGAACACCGCTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp ATTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAACGCTCTTAGGCCATTaGGAGTCCACGGCGGTGTAC +
Preference number: 5 (lower is better)
Translates to: IARCRLLLYLYVWDMWSGTLLGH*ESTAVY
Trigger: GTACACCGCCGTGGACTCCAAATGGCCTAAGAGCGT...TCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517781.5
CDS GCA 90 bp CGCCCGCTCACACTCTCTGCCTCCCTAACCAATTGTGTCGCTTCCTaGGCTTTCTCCACGGTCACTTCACAGCTAAGATTTCTTTCTTTC +
Preference number: 5 (lower is better)
Translates to: RPLTLSASLTNCVAS*AFSTVTSQLRFLSF
Trigger: GAAAGAAAGAAATCTTAGCTGTGAAGTGACCGTGGAGAAAGCGCAGGAAGCGACACAATTGGTTAGGGAGGCAGAGAGTGTGAGCGGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS-3UTR CAA 90 bp AGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGGGCTGGGGAAAAGTTaGCCGAGACCGGCTGGGAGC +
Preference number: 5 (lower is better)
Translates to: RNFQSISSAKSSFIAQQCGLGKS*PRPAGS
Trigger: GCTCCCAGCCGGTCTCGGCAAACTTTTCCCCAGCCC...ACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS-3UTR CAA 90 bp GCCGGGGACGGATTCTCTCAGCACACACTGAGCCAAGTCACGGGCTGTGCACTTAAGCCTACTTTGCACTaGGTACAAAAGTCTTTGCTA +
Preference number: 5 (lower is better)
Translates to: AGDGFSQHTLSQVTGCALKPTLH*VQKSLL
Trigger: TAGCAAAGACTTTTGTACCAAGTGCAAAGTAGGCTT...AAGTGCACAGCCCGTGACTTGGCTCAGTGTGTGCTGAGAGAATCCGTCCCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp GCCGGGGACGGATTCTCTCAGCACACACTGAGCCAAGTCACGGGCTGTGCACTTAATCTACCGGATCTCTaGTTTTATTGGTTAGCTCTG +
Preference number: 5 (lower is better)
Translates to: AGDGFSQHTLSQVTGCALNLPDL*FYWLAL
Trigger: CAGAGCTAACCAATAAAACAAGAGATCCGGTAGATT...AAGTGCACAGCCCGTGACTTGGCTCAGTGTGTGCTGAGAGAATCCGTCCCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp TCCTCCAGCGGTGTTCTGCAGCCTCACACCTCTAGCATGTCCATGGTGCCGGGGAGAAATAATGTTTGTTaGGACAATTCTGTAGCTGGC +
Preference number: 5 (lower is better)
Translates to: SSSGVLQPHTSSMSMVPGRNNVC*DNSVAG
Trigger: GCCAGCTACAGAATTGTCCAAACAAACATTATTTCT...CCCCGGCACCATGGACATGCTAGAGGTGTGAGGCTGCAGAACACCGCTGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCACATTGGTAGGTGCCTaGTCATTTAAAGCCAGGGAT +
Preference number: 5 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSTLVGA*SFKARD
Trigger: ATCCCTGGCTTTAAATGACAAGGCACCTACCAATGT...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCAGTGACCCAAGAACATaGGTAGGTGCCTTGTCATTT +
Preference number: 5 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSSDPRT*VGALSF
Trigger: AAATGACAAGGCACCTACCAATGTTCTTGGGTCACT...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp GCCGGGGACGGATTCTCTCAGCACACACTGAGCCAAGTCACGGGCTGTGCACTTAGGCTTTACCTTGCTTaGTTTCAAAATCCACAACCA +
Preference number: 5 (lower is better)
Translates to: AGDGFSQHTLSQVTGCALRLYLA*FQNPQP
Trigger: TGGTTGTGGATTTTGAAACAAAGCAAGGTAAAGCCT...AAGTGCACAGCCCGTGACTTGGCTCAGTGTGTGCTGAGAGAATCCGTCCCCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS GCA 90 bp AGAGAAGAAGGCTTCAGACGATCAAACTTCTCCAAGCTCGCTTACTaGGTCTCCATCGGTTGCCTTGGCAGTGGCTGTAATCCATGCAGT +
Preference number: 5 (lower is better)
Translates to: REEGFRRSNFSKLAY*VSIGCLGSGCNPCS
Trigger: ACTGCATGGATTACAGCCACTGCCAAGGCAACCGATGGAGACGCAGTAAGCGAGCTTGGAGAAGTTTGATCGTCTGAAGCCTTCTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666252.1
CDS CCA 90 bp AGAGGAAACTCAGAGGCAGAGTTGAGGCCAGAAGCTAAAGCTGAATaGCTCATGGGGATGTCAGACCAGACAGAGGTAGAACTTAGGGCA +
Preference number: 5 (lower is better)
Translates to: RGNSEAELRPEAKAE*LMGMSDQTEVELRA
Trigger: TGCCCTAAGTTCTACCTCTGTCTGGTCTGACATCCCCATGAGCCATTCAGCTTTAGCTTCTGGCCTCAACTCTGCCTCTGAGTTTCCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521757.1
CDS-3UTR CAA 90 bp ACTGGGAACAGATACTGGGCAGAGCAGCACAAAGGCTGCACACCAGTGTGCAGGTGGTTGGACACAGTATaGTGTCTTTCACTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: TGNRYWAEQHKGCTPVCRWLDTV*CLSLAF
Trigger: AAAAGCCAGTGAAAGACACAATACTGTGTCCAACCA...CCTGCACACTGGTGTGCAGCCTTTGTGCTGCTCTGCCCAGTATCTGTTCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCAAGCCTACTTTGCACTaGGTACAAAAGTCTTTGCTA +
Preference number: 5 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSKPTLH*VQKSLL
Trigger: TAGCAAAGACTTTTGTACCAAGTGCAAAGTAGGCTT...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp ATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTGCTTGCCTCATTGTCATCTaGCATCTCCTGGATTCAGCA +
Preference number: 5 (lower is better)
Translates to: ILDSKAVWASDCQMPPAACLIVI*HLLDSA
Trigger: TGCTGAATCCAGGAGATGCAAGATGACAATGAGGCA...AGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCACTGAAGAGGTAGTTTaGCCAATGCAAGGTGAAAAA +
Preference number: 5 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSTEEVV*PMQGEK
Trigger: TTTTTCACCTTGCATTGGCAAAACTACCTCTTCAGT...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCTTTCTATTCTGCATCTaGCACATCTGTTCATATCTG +
Preference number: 5 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSFLFCI*HICSYL
Trigger: CAGATATGAACAGATGTGCAAGATGCAGAATAGAAA...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp TGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTATGCCTCATTGTCATCTaGCATCTCCTGGATTCAGCA +
Preference number: 5 (lower is better)
Translates to: CRLLLYLYVWDMWSGEGLCLIVI*HLLDSA
Trigger: TGCTGAATCCAGGAGATGCAAGATGACAATGAGGCA...TAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp CACACACTGAGCCAAGTCACGGGCTGTGCACTTACTCCTGCCTTCACAGTCTCCTTAATCAGGTATGACTaGTTACCCACAAGAAAGCAT +
Preference number: 5 (lower is better)
Translates to: HTLSQVTGCALTPAFTVSLIRYD*LPTRKH
Trigger: ATGCTTTCTTGTGGGTAACAAGTCATACCTGATTAA...GGAGACTGTGAAGGCAGGAGTAAGTGCACAGCCCGTGACTTGGCTCAGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp ACTGGGAACAGATACTGGGCAGAGCAGCACAAAGGCTGCACACCAGTGTGCAGGAGAAATAATGTTTGTTaGGACAATTCTGTAGCTGGC +
Preference number: 5 (lower is better)
Translates to: TGNRYWAEQHKGCTPVCRRNNVC*DNSVAG
Trigger: GCCAGCTACAGAATTGTCCAAACAAACATTATTTCT...CCTGCACACTGGTGTGCAGCCTTTGTGCTGCTCTGCCCAGTATCTGTTCCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp TATGTAGCTCCTGCAGTATATGTACATATTAGGGCTGCAGTGAAACTGAGCAGGTCTCCATCGGTTGCCTaGGCAGTGGCTGTAATCCAT +
Preference number: 5 (lower is better)
Translates to: YVAPAVYVHIRAAVKLSRSPSVA*AVAVIH
Trigger: ATGGATTACAGCCACTGCCAAGGCAACCGATGGAGA...CCTGCTCAGTTTCACTGCAGCCCTAATATGTACATATACTGCAGGAGCTACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000666252.1
CDS-3UTR CAA 90 bp GCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCACATCGGCTACACCCATaGTCCTTTGAACAAGACAAA +
Preference number: 5 (lower is better)
Translates to: ACCFIYMCGTCGVEKVYPHRLHP*SFEQDK
Trigger: TTTGTCTTGTTCAAAGGACAATGGGTGTAGCCGATG...TGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp TGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTAGAAGAACAACTTCTGTaGACATCGGCTACACCCATT +
Preference number: 5 (lower is better)
Translates to: CRLLLYLYVWDMWSGEGLEEQLL*TSATPI
Trigger: AATGGGTGTAGCCGATGTCAACAGAAGTTGTTCTTC...TAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp ATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTGCTTGGCTTTTTAACAATTaGCCGTGTTCTGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: ILDSKAVWASDCQMPPAAWLFNN*PCSGFQ
Trigger: CTGGAAACCAGAACACGGCAAATTGTTAAAAAGCCA...AGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTTGGTTGGACACAGTATaGTGTCTTTCACTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: HILDSKAVWASDCQMPPAWLDTV*CLSLAF
Trigger: AAAAGCCAGTGAAAGACACAATACTGTGTCCAACCA...AGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTGGATCTCTTGTTTTATaGGTTAGCTCTGTCTGTAGC +
Preference number: 5 (lower is better)
Translates to: HILDSKAVWASDCQMPPAGSLVL*VSSVCS
Trigger: GCTACAGACAGAGCTAACCAATAAAACAAGAGATCC...AGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTGAGTGGAGAGTAGCTTaGTGCACATTTGCAAAAACA +
Preference number: 5 (lower is better)
Translates to: HILDSKAVWASDCQMPPAEWRVA*CTFAKT
Trigger: TGTTTTTGCAAATGTGCACAAAGCTACTCTCCACTC...AGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp ATTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAACATTGGTAGGTGCCTaGTCATTTAAAGCCAGGGAT +
Preference number: 5 (lower is better)
Translates to: IARCRLLLYLYVWDMWSGTLVGA*SFKARD
Trigger: ATCCCTGGCTTTAAATGACAAGGCACCTACCAATGT...TCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp TATGTAGCTCCTGCAGTATATGTACATATTAGGGCTGCAGTGAAACTGAGCAGGGCAGCTGCGGACGAGTaGGAGAGGAAGGTGATTATA +
Preference number: 5 (lower is better)
Translates to: YVAPAVYVHIRAAVKLSRAAADE*ERKVII
Trigger: TATAATCACCTTCCTCTCCAACTCGTCCGCAGCTGC...CCTGCTCAGTTTCACTGCAGCCCTAATATGTACATATACTGCAGGAGCTACATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517781.5
CDS TCA 90 bp CGCCAGCAATGGAACAAAGCTGGATGGAGAATGACTTTGACTAGTTaGGAGAAGAAGGCTTCAGACGATCAAACTTCTCCAAGCTCGCTT +
Preference number: 5 (lower is better)
Translates to: RQQWNKAGWRMTLTS*EKKASDDQTSPSSL
Trigger: AAGCGAGCTTGGAGAAGTTTGATCGTCTGAAGCCTTCTTCTCTCAACTAGTCAAAGTCATTCTCCATCCAGCTTTGTTCCATTGCTGGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666252.1
CDS-3UTR CAA 90 bp AGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTTGCCTCCCTAACCAATaGTGTCGCTTCCTGCGCTTT +
Preference number: 5 (lower is better)
Translates to: RNFQSISSAKSSFIAQQCCLPNQ*CRFLRF
Trigger: AAAGCGCAGGAAGCGACACAATTGGTTAGGGAGGCA...ACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS-3UTR CAA 90 bp ATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTGCTAAGCCTACTTTGCACTaGGTACAAAAGTCTTTGCTA +
Preference number: 5 (lower is better)
Translates to: ILDSKAVWASDCQMPPAAKPTLH*VQKSLL
Trigger: TAGCAAAGACTTTTGTACCAAGTGCAAAGTAGGCTT...AGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp ATTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGATGGCTTTTTAACAATTaGCCGTGTTCTGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: IARCRLLLYLYVWDMWSGWLFNN*PCSGFQ
Trigger: CTGGAAACCAGAACACGGCAAATTGTTAAAAAGCCA...TCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp ATTGCCAGATGCCGCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGATGGATTCAGCAATGGTaGGACACAGTATTGTGTCTT +
Preference number: 5 (lower is better)
Translates to: IARCRLLLYLYVWDMWSGWIQQW*DTVLCL
Trigger: AAGACACAATACTGTGTCCAACCATTGCTGAATCCA...TCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGCGGCATCTGGCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp ATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAATATGCAAACTCCTGGACAATGCCTCATaGTCATCTTGCATCTCCTGG +
Preference number: 5 (lower is better)
Translates to: IYMCGTCGVEKVYPICKLLDNAS*SSCISW
Trigger: CCAGGAGATGCAAGATGACAATGAGGCATTGTCCAG...GAGTTTGCATATTGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp TATGTAGCTCCTGCAGTATATGTACATATTAGGGCTGCAGTGAAACTGAGCAGGCTGGACAATGCCTCATaGTCATCTTGCATCTCCTGG +
Preference number: 5 (lower is better)
Translates to: YVAPAVYVHIRAAVKLSRLDNAS*SSCISW
Trigger: CCAGGAGATGCAAGATGACAATGAGGCATTGTCCAG...CCTGCTCAGTTTCACTGCAGCCCTAATATGTACATATACTGCAGGAGCTACATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp GCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAGAGTGGAGAGTAGCTTaGTGCACATTTGCAAAAACA +
Preference number: 5 (lower is better)
Translates to: ACCFIYMCGTCGVEKVYPEWRVA*CTFAKT
Trigger: TGTTTTTGCAAATGTGCACAAAGCTACTCTCCACTC...TGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp AGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTCGAGTGAGTAGCGCATaGCCTGCCAAGCATCTTCTT +
Preference number: 5 (lower is better)
Translates to: RNFQSISSAKSSFIAQQCRVSSA*PAKHLL
Trigger: AAGAAGATGCTTGGCAGGCAATGCGCTACTCACTCG...ACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp CACATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTTTGGTACAAAAGTCTTaGCTAAAGCAAGAATCACAG +
Preference number: 5 (lower is better)
Translates to: HILDSKAVWASDCQMPPALVQKS*LKQESQ
Trigger: CTGTGATTCTTGCTTTAGCAAAGACTTTTGTACCAA...AGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp ATCTTAGACTCAAAGGCAGTTTGGGCTTCTGATTGCCAGATGCCGCCTGCTGCTTTGGTACAAAAGTCTTaGCTAAAGCAAGAATCACAG +
Preference number: 5 (lower is better)
Translates to: ILDSKAVWASDCQMPPAALVQKS*LKQESQ
Trigger: CTGTGATTCTTGCTTTAGCAAAGACTTTTGTACCAA...AGCAGCAGGCGGCATCTGGCAATCAGAAGCCCAAACTGCCTTTGAGTCTAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp GCCTGCTGCTTTATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAAAGCCTACTTTGCACTaGGTACAAAAGTCTTTGCTA +
Preference number: 5 (lower is better)
Translates to: ACCFIYMCGTCGVEKVYPKPTLH*VQKSLL
Trigger: TAGCAAAGACTTTTGTACCAAGTGCAAAGTAGGCTT...TGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGATAAAGCAGCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp GCAGTGAAACTGAGCAGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCTGCCTCATTGTCATCTaGCATCTCCTGGATTCAGCA +
Preference number: 5 (lower is better)
Translates to: AVKLSRNFQSISSAKSSFCLIVI*HLLDSA
Trigger: TGCTGAATCCAGGAGATGCAAGATGACAATGAGGCA...GAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCTGCTCAGTTTCACTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp AGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTCTGGACAATGCCTCATaGTCATCTTGCATCTCCTGG +
Preference number: 5 (lower is better)
Translates to: RNFQSISSAKSSFIAQQCLDNAS*SSCISW
Trigger: CCAGGAGATGCAAGATGACAATGAGGCATTGTCCAG...ACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAACGAGTGAGTAGCGCATaGCCTGCCAAGCATCTTCTT +
Preference number: 5 (lower is better)
Translates to: NFQSISSAKSSFIAQQCERVSSA*PAKHLL
Trigger: AAGAAGATGCTTGGCAGGCAATGCGCTACTCACTCG...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp ATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAATATGCAAACTCACATTGGTAGGTGCCTaGTCATTTAAAGCCAGGGAT +
Preference number: 5 (lower is better)
Translates to: IYMCGTCGVEKVYPICKLTLVGA*SFKARD
Trigger: ATCCCTGGCTTTAAATGACAAGGCACCTACCAATGT...GAGTTTGCATATTGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp ATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAATATGCAAACTCAGTGACCCAAGAACATaGGTAGGTGCCTTGTCATTT +
Preference number: 5 (lower is better)
Translates to: IYMCGTCGVEKVYPICKLSDPRT*VGALSF
Trigger: AAATGACAAGGCACCTACCAATGTTCTTGGGTCACT...GAGTTTGCATATTGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp GCAGTGAAACTGAGCAGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCAAACCAGCGCGGGAATaGCTGCTTAATTCAGAAAGT +
Preference number: 5 (lower is better)
Translates to: AVKLSRNFQSISSAKSSFKPARE*LLNSES
Trigger: ACTTTCTGAATTAAGCAGCAATTCCCGCGCTGGTTT...GAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCTGCTCAGTTTCACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517939.5
CDS TCA 90 bp TCTTCAATCATGATGCTGCTCAGTGCTGAAGGACAAGAGCCCATGTaGTTTTTACAATTTGAAGCTTCTTGCCCCAAACCTCAAACAGAC +
Preference number: 5 (lower is better)
Translates to: SSIMMLLSAEGQEPM*FLQFEASCPKPQTD
Trigger: GTCTGTTTGAGGTTTGGGGCAAGAAGCTTCAAATTGTAAAAATCACATGGGCTCTTGTCCTTCAGCACTGAGCAGCATCATGATTGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520026.1
CDS-3UTR CAA 90 bp AGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAAGAACAACTTCTGTaGACATCGGCTACACCCATT +
Preference number: 5 (lower is better)
Translates to: RNFQSISSAKSSFIAQQCEEQLL*TSATPI
Trigger: AATGGGTGTAGCCGATGTCAACAGAAGTTGTTCTTC...ACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp TATGTAGCTCCTGCAGTATATGTACATATTAGGGCTGCAGTGAAACTGAGCAGGTGGTTGGACACAGTATaGTGTCTTTCACTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: YVAPAVYVHIRAAVKLSRWLDTV*CLSLAF
Trigger: AAAAGCCAGTGAAAGACACAATACTGTGTCCAACCA...CCTGCTCAGTTTCACTGCAGCCCTAATATGTACATATACTGCAGGAGCTACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp GCAGTGAAACTGAGCAGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCGGATCTCTTGTTTTATaGGTTAGCTCTGTCTGTAGC +
Preference number: 5 (lower is better)
Translates to: AVKLSRNFQSISSAKSSFGSLVL*VSSVCS
Trigger: GCTACAGACAGAGCTAACCAATAAAACAAGAGATCC...GAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCTGCTCAGTTTCACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp TATGTAGCTCCTGCAGTATATGTACATATTAGGGCTGCAGTGAAACTGAGCAGGGAGTGGAGAGTAGCTTaGTGCACATTTGCAAAAACA +
Preference number: 5 (lower is better)
Translates to: YVAPAVYVHIRAAVKLSREWRVA*CTFAKT
Trigger: TGTTTTTGCAAATGTGCACAAAGCTACTCTCCACTC...CCTGCTCAGTTTCACTGCAGCCCTAATATGTACATATACTGCAGGAGCTACATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp GCAGTGAAACTGAGCAGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCGAGTGGAGAGTAGCTTaGTGCACATTTGCAAAAACA +
Preference number: 5 (lower is better)
Translates to: AVKLSRNFQSISSAKSSFEWRVA*CTFAKT
Trigger: TGTTTTTGCAAATGTGCACAAAGCTACTCTCCACTC...GAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCTGCTCAGTTTCACTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp TATGTAGCTCCTGCAGTATATGTACATATTAGGGCTGCAGTGAAACTGAGCAGGAATCTACCGGATCTCTaGTTTTATTGGTTAGCTCTG +
Preference number: 5 (lower is better)
Translates to: YVAPAVYVHIRAAVKLSRNLPDL*FYWLAL
Trigger: CAGAGCTAACCAATAAAACAAGAGATCCGGTAGATT...CCTGCTCAGTTTCACTGCAGCCCTAATATGTACATATACTGCAGGAGCTACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp ATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAATATGCAAACTCAATCTACCGGATCTCTaGTTTTATTGGTTAGCTCTG +
Preference number: 5 (lower is better)
Translates to: IYMCGTCGVEKVYPICKLNLPDL*FYWLAL
Trigger: CAGAGCTAACCAATAAAACAAGAGATCCGGTAGATT...GAGTTTGCATATTGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAAAGTGACCCAAGAACATaGGTAGGTGCCTTGTCATTT +
Preference number: 5 (lower is better)
Translates to: NFQSISSAKSSFIAQQCESDPRT*VGALSF
Trigger: AAATGACAAGGCACCTACCAATGTTCTTGGGTCACT...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp TATGTAGCTCCTGCAGTATATGTACATATTAGGGCTGCAGTGAAACTGAGCAGGTTGGTACAAAAGTCTTaGCTAAAGCAAGAATCACAG +
Preference number: 5 (lower is better)
Translates to: YVAPAVYVHIRAAVKLSRLVQKS*LKQESQ
Trigger: CTGTGATTCTTGCTTTAGCAAAGACTTTTGTACCAA...CCTGCTCAGTTTCACTGCAGCCCTAATATGTACATATACTGCAGGAGCTACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAATGGCTTTTTAACAATTaGCCGTGTTCTGGTTTCCAG +
Preference number: 5 (lower is better)
Translates to: NFQSISSAKSSFIAQQCEWLFNN*PCSGFQ
Trigger: CTGGAAACCAGAACACGGCAAATTGTTAAAAAGCCA...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAAGGATCTCTTGTTTTATaGGTTAGCTCTGTCTGTAGC +
Preference number: 5 (lower is better)
Translates to: NFQSISSAKSSFIAQQCEGSLVL*VSSVCS
Trigger: GCTACAGACAGAGCTAACCAATAAAACAAGAGATCC...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp ATCTATATGTGTGGGACATGTGGAGTGGAGAAGGTCTACCCAATATGCAAACTCTTAATCAGGTATGACTaGTTACCCACAAGAAAGCAT +
Preference number: 5 (lower is better)
Translates to: IYMCGTCGVEKVYPICKLLIRYD*LPTRKH
Trigger: ATGCTTTCTTGTGGGTAACAAGTCATACCTGATTAA...GAGTTTGCATATTGGGTAGACCTTCTCCACTCCACATGTCCCACACATATAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp GCAGTGAAACTGAGCAGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCAGAAATAATGTTTGTTaGGACAATTCTGTAGCTGGC +
Preference number: 5 (lower is better)
Translates to: AVKLSRNFQSISSAKSSFRNNVC*DNSVAG
Trigger: GCCAGCTACAGAATTGTCCAAACAAACATTATTTCT...GAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCTGCTCAGTTTCACTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp AGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTTTTCTATTCTGCATCTaGCACATCTGTTCATATCTG +
Preference number: 5 (lower is better)
Translates to: RNFQSISSAKSSFIAQQCFLFCI*HICSYL
Trigger: CAGATATGAACAGATGTGCAAGATGCAGAATAGAAA...ACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp AGGAATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTTTAATCAGGTATGACTaGTTACCCACAAGAAAGCAT +
Preference number: 5 (lower is better)
Translates to: RNFQSISSAKSSFIAQQCLIRYD*LPTRKH
Trigger: ATGCTTTCTTGTGGGTAACAAGTCATACCTGATTAA...ACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAATTGGTACAAAAGTCTTaGCTAAAGCAAGAATCACAG +
Preference number: 5 (lower is better)
Translates to: NFQSISSAKSSFIAQQCELVQKS*LKQESQ
Trigger: CTGTGATTCTTGCTTTAGCAAAGACTTTTGTACCAA...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp AATTTCCAGAGCATATCCTCAGCTAAAAGCAGTTTCATCGCACAACAGTGTGAATTAATCAGGTATGACTaGTTACCCACAAGAAAGCAT +
Preference number: 5 (lower is better)
Translates to: NFQSISSAKSSFIAQQCELIRYD*LPTRKH
Trigger: ATGCTTTCTTGTGGGTAACAAGTCATACCTGATTAA...TTCACACTGTTGTGCGATGAAACTGCTTTTAGCTGAGGATATGCTCTGGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp GACATGAAAGGAGGTAACACTTCAGGATTAAATGTAAACCCTAAAGTTGTATACTGGTTGGACACAGTATaGTGTCTTTCACTGGCTTTT +
Preference number: 5 (lower is better)
Translates to: DMKGGNTSGLNVNPKVVYWLDTV*CLSLAF
Trigger: AAAAGCCAGTGAAAGACACAATACTGTGTCCAACCA...GTATACAACTTTAGGGTTTACATTTAATCCTGAAGTGTTACCTCCTTTCATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp ATAAAAGCCTACTTTGCACTTGGTACAAAAGTCTTTGCTAAAGCAAGAATCACATGGATTCAGCAATGGTaGGACACAGTATTGTGTCTT +
Preference number: 5 (lower is better)
Translates to: IKAYFALGTKVFAKARITWIQQW*DTVLCL
Trigger: AAGACACAATACTGTGTCCAACCATTGCTGAATCCA...TGTGATTCTTGCTTTAGCAAAGACTTTTGTACCAAGTGCAAAGTAGGCTTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000666252.1
CDS-3UTR CAA 90 bp GACATGAAAGGAGGTAACACTTCAGGATTAAATGTAAACCCTAAAGTTGTATACGGATCTCTTGTTTTATaGGTTAGCTCTGTCTGTAGC +
Preference number: 5 (lower is better)
Translates to: DMKGGNTSGLNVNPKVVYGSLVL*VSSVCS
Trigger: GCTACAGACAGAGCTAACCAATAAAACAAGAGATCC...GTATACAACTTTAGGGTTTACATTTAATCCTGAAGTGTTACCTCCTTTCATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp GACATGAAAGGAGGTAACACTTCAGGATTAAATGTAAACCCTAAAGTTGTATACAATCTACCGGATCTCTaGTTTTATTGGTTAGCTCTG +
Preference number: 5 (lower is better)
Translates to: DMKGGNTSGLNVNPKVVYNLPDL*FYWLAL
Trigger: CAGAGCTAACCAATAAAACAAGAGATCCGGTAGATT...GTATACAACTTTAGGGTTTACATTTAATCCTGAAGTGTTACCTCCTTTCATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS-3UTR CAA 90 bp GACATGAAAGGAGGTAACACTTCAGGATTAAATGTAAACCCTAAAGTTGTATACAGGCTTTACCTTGCTTaGTTTCAAAATCCACAACCA +
Preference number: 5 (lower is better)
Translates to: DMKGGNTSGLNVNPKVVYRLYLA*FQNPQP
Trigger: TGGTTGTGGATTTTGAAACAAAGCAAGGTAAAGCCT...GTATACAACTTTAGGGTTTACATTTAATCCTGAAGTGTTACCTCCTTTCATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000517939.5
ENST00000666252.1
CDS GCA 72 bp GGCAGGAGCGCGGAGCGGCGGGTGCAGCCACTGGGATaGTCCGTCCCCGCCCGCGAGCGCGGTCCCCAGGCA +
Preference number: 6 (lower is better)
Translates to: GRSAERRVQPLG*SVPARERGPQA
Trigger: TGCCTGGGGACCGCGCTCGCGGGCGGGGACGGAGCATCCCAGTGGCTGCACCCGCCGCTCCGCGCTCCTGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS GCA 72 bp GGTTGGCGACGCCAGGCAGGAGCGCGGAGCGGCGGGTaGAGCCACTGGGATGCTCCGTCCCCGCCCGCGAGC +
Preference number: 6 (lower is better)
Translates to: GWRRQAGARSGG*SHWDAPSPPAS
Trigger: GCTCGCGGGCGGGGACGGAGCATCCCAGTGGCTGCACCCGCCGCTCCGCGCTCCTGCCTGGCGTCGCCAACC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS CAA 90 bp CTCCCTAGGCGCGGTGCTCCATCCCGGGCTCGGGAAGCGAGCCGCTaGGTTAGCACGTGGGCTGGGGAAAAGTTTGCCGAGACCGGCTGG +
Preference number: 6 (lower is better)
Translates to: LPRRGAPSRAREASR*VSTWAGEKFAETGW
Trigger: CCAGCCGGTCTCGGCAAACTTTTCCCCAGCCCACGTGCTAACCAAGCGGCTCGCTTCCCGAGCCCGGGATGGAGCACCGCGCCTAGGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS CCA 72 bp TCCCGGGCTCGGGAAGCGAGCCGCTTGGTTAGCACGTaGGCTGGGGAAAAGTTTGCCGAGACCGGCTGGGAG +
Preference number: 6 (lower is better)
Translates to: SRAREASRLVST*AGEKFAETGWE
Trigger: CTCCCAGCCGGTCTCGGCAAACTTTTCCCCAGCCCACGTGCTAACCAAGCGGCTCGCTTCCCGAGCCCGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS CAA 72 bp CGAGCCGCTTGGTTAGCACGTGGGCTGGGGAAAAGTTaGCCGAGACCGGCTGGGAGCGCCTGGCAGCTCTGG +
Preference number: 6 (lower is better)
Translates to: RAAWLARGLGKS*PRPAGSAWQLW
Trigger: CCAGAGCTGCCAGGCGCTCCCAGCCGGTCTCGGCAAACTTTTCCCCAGCCCACGTGCTAACCAAGCGGCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS CAA 72 bp CGCGGTGCTCCATCCCGGGCTCGGGAAGCGAGCCGCTaGGTTAGCACGTGGGCTGGGGAAAAGTTTGCCGAG +
Preference number: 6 (lower is better)
Translates to: RGAPSRAREASR*VSTWAGEKFAE
Trigger: CTCGGCAAACTTTTCCCCAGCCCACGTGCTAACCAAGCGGCTCGCTTCCCGAGCCCGGGATGGAGCACCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS CCA 72 bp GCGGTGCTCCATCCCGGGCTCGGGAAGCGAGCCGCTTaGTTAGCACGTGGGCTGGGGAAAAGTTTGCCGAGA +
Preference number: 6 (lower is better)
Translates to: AVLHPGLGKRAA*LARGLGKSLPR
Trigger: TCTCGGCAAACTTTTCCCCAGCCCACGTGCTAACCAAGCGGCTCGCTTCCCGAGCCCGGGATGGAGCACCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS CAA 90 bp CTCGGGAAGCGAGCCGCTTGGTTAGCACGTGGGCTGGGGAAAAGTTaGCCGAGACCGGCTGGGAGCGCCTGGCAGCTCTGGAATTCCAGC +
Preference number: 6 (lower is better)
Translates to: LGKRAAWLARGLGKS*PRPAGSAWQLWNSS
Trigger: GCTGGAATTCCAGAGCTGCCAGGCGCTCCCAGCCGGTCTCGGCAAACTTTTCCCCAGCCCACGTGCTAACCAAGCGGCTCGCTTCCCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS GCA 72 bp GGTCCCCAGGCAAGGGGTGCGCCCGCTCACACTCTCTaGCTCCCTAACCAATTGTGTCGCTTCCTGCGCTTT +
Preference number: 6 (lower is better)
Translates to: GPQARGAPAHTL*LPNQLCRFLRF
Trigger: AAAGCGCAGGAAGCGACACAATTGGTTAGGGAGGCAGAGAGTGTGAGCGGGCGCACCCCTTGCCTGGGGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS CAA 72 bp GGTGCGCCCGCTCACACTCTCTGCCTCCCTAACCAATaGTGTCGCTTCCTGCGCTTTCTCCACGGTCACTTC +
Preference number: 6 (lower is better)
Translates to: GAPAHTLCLPNQ*CRFLRFLHGHF
Trigger: GAAGTGACCGTGGAGAAAGCGCAGGAAGCGACACAATTGGTTAGGGAGGCAGAGAGTGTGAGCGGGCGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS CAA 90 bp CAGGCAAGGGGTGCGCCCGCTCACACTCTCTGCCTCCCTAACCAATaGTGTCGCTTCCTGCGCTTTCTCCACGGTCACTTCACAGCTAAG +
Preference number: 6 (lower is better)
Translates to: QARGAPAHTLCLPNQ*CRFLRFLHGHFTAK
Trigger: CTTAGCTGTGAAGTGACCGTGGAGAAAGCGCAGGAAGCGACACAATTGGTTAGGGAGGCAGAGAGTGTGAGCGGGCGCACCCCTTGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000276659.10
CDS GCA 72 bp TTCAGAATGATGAGGGCAAAGGAGAAAAGGCGAAACTaGATCTGGGCGGTCGGGCGGGGGAGAGACGCCTCT +
Preference number: 6 (lower is better)
Translates to: FRMMRAKEKRRN*IWAVGRGRDAS
Trigger: AGAGGCGTCTCTCCCCCGCCCGACCGCCCAGATGCAGTTTCGCCTTTTCTCCTTTGCCCTCATCATTCTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000521956.5
ENST00000522333.1
ENST00000666252.1
CDS CCA 72 bp ATGATGAGGGCAAAGGAGAAAAGGCGAAACTGCATCTaGGCGGTCGGGCGGGGGAGAGACGCCTCTCAAAGT +
Preference number: 6 (lower is better)
Translates to: MMRAKEKRRNCI*AVGRGRDASQS
Trigger: ACTTTGAGAGGCGTCTCTCCCCCGCCCGACCGCCCAGATGCAGTTTCGCCTTTTCTCCTTTGCCCTCATCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000276659.10
ENST00000517781.5
ENST00000521956.5
ENST00000522333.1
ENST00000666252.1
CDS CAA 90 bp CGAGCCGCGGAGCGGCTTAATCCAGAGCGGGCAGCTGCGGACGAGTaGGAGAGGAAGGTGATTATAATCAGTGAATTAGCAACCTCTGCC +
Preference number: 6 (lower is better)
Translates to: RAAERLNPERAAADE*ERKVIIISELATSA
Trigger: GGCAGAGGTTGCTAATTCACTGATTATAATCACCTTCCTCTCCAACTCGTCCGCAGCTGCCCGCTCTGGATTAAGCCGCTCCGCGGCTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517781.5
CDS TCA 72 bp AGCTGTAGAAGGCAGAACGCTCTCGGGAGGACGAAGTaGTCCGAAGGGATGTGGCAAGCGCACTTTCCGATG +
Preference number: 6 (lower is better)
Translates to: SCRRQNALGRTK*SEGMWQAHFPM
Trigger: CATCGGAAAGTGCGCTTGCCACATCCCTTCGGATCACTTCGTCCTCCCGAGAGCGTTCTGCCTTCTACAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276659.10
ENST00000522333.1
CDS CCA 72 bp AGTGATCCGAAGGGATGTGGCAAGCGCACTTTCCGATaGAGATGCAGACCGGCTGAGGCTTGGGATGCTTCT +
Preference number: 6 (lower is better)
Translates to: SDPKGCGKRTFR*RCRPAEAWDAS
Trigger: AGAAGCATCCCAAGCCTCAGCCGGTCTGCATCTCCATCGGAAAGTGCGCTTGCCACATCCCTTCGGATCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522333.1
CDS GCA 72 bp GGAGGCGAGGACTCCCCAGAAAACCAGCGCGGGAATTaGTGCTTAATTCAGAAAGTTCCCATCTCGTCGCAG +
Preference number: 6 (lower is better)
Translates to: GGEDSPENQRGN*CLIQKVPISSQ
Trigger: CTGCGACGAGATGGGAACTTTCTGAATTAAGCAGCAATTCCCGCGCTGGTTTTCTGGGGAGTCCTCGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517939.5
CDS CAA 72 bp TGGAGGCGAGGACTCCCCAGAAAACCAGCGCGGGAATaGCTGCTTAATTCAGAAAGTTCCCATCTCGTCGCA +
Preference number: 6 (lower is better)
Translates to: WRRGLPRKPARE*LLNSESSHLVA
Trigger: TGCGACGAGATGGGAACTTTCTGAATTAAGCAGCAATTCCCGCGCTGGTTTTCTGGGGAGTCCTCGCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517939.5
CDS GCA 72 bp GGCTTCAGACGATCAAACTTCTCCAAGCTCGCTTACTaGGTCTCCATCGGTTGCCTTGGCAGTGGCTGTAAT +
Preference number: 6 (lower is better)
Translates to: GFRRSNFSKLAY*VSIGCLGSGCN
Trigger: ATTACAGCCACTGCCAAGGCAACCGATGGAGACGCAGTAAGCGAGCTTGGAGAAGTTTGATCGTCTGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666252.1
CDS TCA 72 bp TGCGGACGAGTTGGAGAGGAAGGTGATTATAATCAGTaGATTAGCAACCTCTGCCGAGCCCTAAGCTCCGAC +
Preference number: 6 (lower is better)
Translates to: CGRVGEEGDYNQ*ISNLCRALSSD
Trigger: GTCGGAGCTTAGGGCTCGGCAGAGGTTGCTAATTCACTGATTATAATCACCTTCCTCTCCAACTCGTCCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517781.5
CDS GCA 72 bp CTATTCTGCATCCTCGCTTACTGCGTCTCCATCGGTTaGCTTGGCAGTGGCTGTAATCCATGCAGTTCAGAA +
Preference number: 6 (lower is better)
Translates to: LFCILAYCVSIG*LGSGCNPCSSE
Trigger: TTCTGAACTGCATGGATTACAGCCACTGCCAAGGCAACCGATGGAGACGCAGTAAGCGAGGATGCAGAATAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517781.5
CDS GCA 72 bp AGCATCTCTCCGCCACGAACCAATTGTGTCGCTTCCTaGGCTTTCTCCACGGTCACTTCACAGCTAAGATTT +
Preference number: 6 (lower is better)
Translates to: SISPPRTNCVAS*AFSTVTSQLRF
Trigger: AAATCTTAGCTGTGAAGTGACCGTGGAGAAAGCGCAGGAAGCGACACAATTGGTTCGTGGCGGAGAGATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522333.1
CDS GCA 72 bp AACTTCTCCAAGCTCGCTTACTGCGTCTCCATCGGTTaGCTTGGCAGTGGCTGTAATCCATGCAGTTCAGAA +
Preference number: 6 (lower is better)
Translates to: NFSKLAYCVSIG*LGSGCNPCSSE
Trigger: TTCTGAACTGCATGGATTACAGCCACTGCCAAGGCAACCGATGGAGACGCAGTAAGCGAGCTTGGAGAAGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666252.1
CDS CAA 72 bp GAGCGGCTTAATCCAGAGCGGGCAGCTGCGGACGAGTaGGAGAGGAAGGTGATTATAATCAGTGAATTAGCA +
Preference number: 6 (lower is better)
Translates to: ERLNPERAAADE*ERKVIIISELA
Trigger: TGCTAATTCACTGATTATAATCACCTTCCTCTCCAACTCGTCCGCAGCTGCCCGCTCTGGATTAAGCCGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517781.5
CDS CAA 72 bp TCTGCATCCTCGCTTACTGCGTCTCCATCGGTTGCCTaGGCAGTGGCTGTAATCCATGCAGTTCAGAATGAT +
Preference number: 6 (lower is better)
Translates to: SASSLTASPSVA*AVAVIHAVQND
Trigger: ATCATTCTGAACTGCATGGATTACAGCCACTGCCAAGGCAACCGATGGAGACGCAGTAAGCGAGGATGCAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517781.5
CDS CAA 72 bp TCTCCAAGCTCGCTTACTGCGTCTCCATCGGTTGCCTaGGCAGTGGCTGTAATCCATGCAGTTCAGAATGAT +
Preference number: 6 (lower is better)
Translates to: SPSSLTASPSVA*AVAVIHAVQND
Trigger: ATCATTCTGAACTGCATGGATTACAGCCACTGCCAAGGCAACCGATGGAGACGCAGTAAGCGAGCTTGGAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666252.1
CDS CAA 90 bp GATCAAACTTCTCCAAGCTCGCTTACTGCGTCTCCATCGGTTGCCTaGGCAGTGGCTGTAATCCATGCAGTTCAGAATGATGAGGGCAAA +
Preference number: 6 (lower is better)
Translates to: DQTSPSSLTASPSVA*AVAVIHAVQNDEGK
Trigger: TTTGCCCTCATCATTCTGAACTGCATGGATTACAGCCACTGCCAAGGCAACCGATGGAGACGCAGTAAGCGAGCTTGGAGAAGTTTGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666252.1
CDS CAA 90 bp GTTTTCTATTCTGCATCCTCGCTTACTGCGTCTCCATCGGTTGCCTaGGCAGTGGCTGTAATCCATGCAGTTCAGAATGATGAGGGCAAA +
Preference number: 6 (lower is better)
Translates to: VFYSASSLTASPSVA*AVAVIHAVQNDEGK
Trigger: TTTGCCCTCATCATTCTGAACTGCATGGATTACAGCCACTGCCAAGGCAACCGATGGAGACGCAGTAAGCGAGGATGCAGAATAGAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517781.5
CDS CAA 72 bp ATAACTAGCTCGCTTACTGCGTCTCCATCGGTTGCCTaGGCAGTGGCTGTAATCCATGCAGTTCAGAATGAT +
Preference number: 6 (lower is better)
Translates to: ITSSLTASPSVA*AVAVIHAVQND
Trigger: ATCATTCTGAACTGCATGGATTACAGCCACTGCCAAGGCAACCGATGGAGACGCAGTAAGCGAGCTAGTTAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276659.10
ENST00000521956.5
ENST00000522333.1
CDS TCA 72 bp TGGAACAAAGCTGGATGGAGAATGACTTTGACTAGTTaGGAGAAGAAGGCTTCAGACGATCAAACTTCTCCA +
Preference number: 6 (lower is better)
Translates to: WNKAGWRMTLTS*EKKASDDQTSP
Trigger: TGGAGAAGTTTGATCGTCTGAAGCCTTCTTCTCTCAACTAGTCAAAGTCATTCTCCATCCAGCTTTGTTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000666252.1