Pregenerated sensors for RSPH1 (Homo sapiens)
Ensembl gene IDs: ENSG00000160188Ensembl transcript IDs: ENST00000291536.8, ENST00000398352.3, ENST00000493019.1
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CCTGCCTCAGCCTCTCAAGTAGCTGGAACTAGATACACACAGCACTGCACCCGGTCGGCCGTGCCCTCCTaGTGTCCGTTCACCCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: PASASQVAGTRYTQHCTRSAVPS*CPFTQV Trigger: CACCTGGGTGAACGGACAGCAGGAGGGCACGGCCGA...CCGGGTGCAGTGCTGTGTGTATCTAGTTCCAGCTACTTGAGAGGCTGAGGCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
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| CDS-3UTR CCA 90 bp | CCTGCCTCAGCCTCTCAAGTAGCTGGAACTAGATACACACAGCACTGCACCCGGCGTAGGTGTCCCCGTTaGGTAGCCGTGCCCTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: PASASQVAGTRYTQHCTRRRCPR*VAVPSH Trigger: GTGGGAGGGCACGGCTACCCAACGGGGACACCTACG...CCGGGTGCAGTGCTGTGTGTATCTAGTTCCAGCTACTTGAGAGGCTGAGGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291536.8 |
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| CDS-3UTR GCA 90 bp | CCTGCCTCAGCCTCTCAAGTAGCTGGAACTAGATACACACAGCACTGCACCCGGCTCCCCGGGTTCTCCTaGACTCTCAGCTCCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: PASASQVAGTRYTQHCTRLPGFS*TLSSWS Trigger: GCTCCAGGAGCTGAGAGTGCAGGAGAACCCGGGGAG...CCGGGTGCAGTGCTGTGTGTATCTAGTTCCAGCTACTTGAGAGGCTGAGGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
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| CDS-3UTR TCA 90 bp | CCTGCCTCAGCCTCTCAAGTAGCTGGAACTAGATACACACAGCACTGCACCCGGTGTGGTTCAGGTGAATaGGCTCGGCCGTGCCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PASASQVAGTRYTQHCTRCGSGE*ARPCPP Trigger: AGGAGGGCACGGCCGAGCTCATTCACCTGAACCACA...CCGGGTGCAGTGCTGTGTGTATCTAGTTCCAGCTACTTGAGAGGCTGAGGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
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| CDS-3UTR GCA 90 bp | GCGATCTCCACTCACTGCAACTGCCACTTTCTGGACTCAAGCAATCCTCCTGCCGCCCTCCCACGTCCGTaGCTTTCGCCTGCCTCATTC | + |
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Preference number: 4 (lower is better) Translates to: AISTHCNCHFLDSSNPPAALPRP*LSPASF Trigger: GAATGAGGCAGGCGAAAGGCACGGACGTGGGAGGGC...GGCAGGAGGATTGCTTGAGTCCAGAAAGTGGCAGTTGCAGTGAGTGGAGATCGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291536.8 |
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| CDS-3UTR GCA 90 bp | AGTGGCGCGATCTCCACTCACTGCAACTGCCACTTTCTGGACTCAAGCAATCCTTCGGCCGTGCCCTCCTaGTGTCCGTTCACCCAGGTG | + |
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Preference number: 4 (lower is better) Translates to: SGAISTHCNCHFLDSSNPSAVPS*CPFTQV Trigger: CACCTGGGTGAACGGACAGCAGGAGGGCACGGCCGA...AGGATTGCTTGAGTCCAGAAAGTGGCAGTTGCAGTGAGTGGAGATCGCGCCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291536.8 |
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| CDS-3UTR GCA 90 bp | CAGTGGCGCGATCTCCACTCACTGCAACTGCCACTTTCTGGACTCAAGCAATCCCTCCCCGGGTTCTCCTaGACTCTCAGCTCCTGGAGC | + |
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Preference number: 4 (lower is better) Translates to: QWRDLHSLQLPLSGLKQSLPGFS*TLSSWS Trigger: GCTCCAGGAGCTGAGAGTGCAGGAGAACCCGGGGAG...GGATTGCTTGAGTCCAGAAAGTGGCAGTTGCAGTGAGTGGAGATCGCGCCACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291536.8 |
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| CDS-3UTR CCA 90 bp | GCGATCTCCACTCACTGCAACTGCCACTTTCTGGACTCAAGCAATCCTCCTGCCAGCCCAGGTCCGACATaGTCTCGCCCCAGCCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: AISTHCNCHFLDSSNPPASPGPT*SRPSLD Trigger: ATCCAGGCTGGGGCGAGACCATGTCGGACCTGGGCT...GGCAGGAGGATTGCTTGAGTCCAGAAAGTGGCAGTTGCAGTGAGTGGAGATCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291536.8 |
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| CDS-3UTR CCA 90 bp | CCTGCCTCAGCCTCTCAAGTAGCTGGAACTAGATACACACAGCACTGCACCCGGGCTCCTGGAGCGTCTTaGCCAGGTCCATCCGTAGAG | + |
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Preference number: 4 (lower is better) Translates to: PASASQVAGTRYTQHCTRAPGAS*PGPSVE Trigger: CTCTACGGATGGACCTGGCCAAGACGCTCCAGGAGC...CCGGGTGCAGTGCTGTGTGTATCTAGTTCCAGCTACTTGAGAGGCTGAGGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
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| CDS-3UTR CCA 90 bp | CCTGCCTCAGCCTCTCAAGTAGCTGGAACTAGATACACACAGCACTGCACCCGGTGCACTCTCAGCTCCTaGAGCGTCTTGGCCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: PASASQVAGTRYTQHCTRCTLSS*SVLARS Trigger: GGACCTGGCCAAGACGCTCCAGGAGCTGAGAGTGCA...CCGGGTGCAGTGCTGTGTGTATCTAGTTCCAGCTACTTGAGAGGCTGAGGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
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| CDS-3UTR TCA 90 bp | GGCGCGATCTCCACTCACTGCAACTGCCACTTTCTGGACTCAAGCAATCCTCCTTGTGGTTCAGGTGAATaGGCTCGGCCGTGCCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GAISTHCNCHFLDSSNPPCGSGE*ARPCPP Trigger: AGGAGGGCACGGCCGAGCTCATTCACCTGAACCACA...AGGAGGATTGCTTGAGTCCAGAAAGTGGCAGTTGCAGTGAGTGGAGATCGCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291536.8 |
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| CDS-3UTR GCA 90 bp | CCTGCCTCAGCCTCTCAAGTAGCTGGAACTAGATACACACAGCACTGCACCCGGTATACGCCATGGCCGTaGCGCAGGTCATTTGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: PASASQVAGTRYTQHCTRYTPWP*RRSFAH Trigger: GTGGGCAAATGACCTGCGGCACGGCCATGGCGTATA...CCGGGTGCAGTGCTGTGTGTATCTAGTTCCAGCTACTTGAGAGGCTGAGGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
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| CDS-3UTR CCA 90 bp | GGCGCGATCTCCACTCACTGCAACTGCCACTTTCTGGACTCAAGCAATCCTCCTTGCACTCTCAGCTCCTaGAGCGTCTTGGCCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: GAISTHCNCHFLDSSNPPCTLSS*SVLARS Trigger: GGACCTGGCCAAGACGCTCCAGGAGCTGAGAGTGCA...AGGAGGATTGCTTGAGTCCAGAAAGTGGCAGTTGCAGTGAGTGGAGATCGCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291536.8 |
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| CDS-3UTR TCA 90 bp | AGTGGCGCGATCTCCACTCACTGCAACTGCCACTTTCTGGACTCAAGCAATCCTTACCTGTGGTTCAGGTaGATGAGCTCGGCCGTGCCC | + |
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Preference number: 4 (lower is better) Translates to: SGAISTHCNCHFLDSSNPYLWFR*MSSAVP Trigger: GGGCACGGCCGAGCTCATTCACCTGAACCACAGGTA...AGGATTGCTTGAGTCCAGAAAGTGGCAGTTGCAGTGAGTGGAGATCGCGCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291536.8 |
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| CDS-3UTR GCA 90 bp | CCTGCCTCAGCCTCTCAAGTAGCTGGAACTAGATACACACAGCACTGCACCCGGGTCCGTTCACCCAGGTaGCAACATACTTACTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: PASASQVAGTRYTQHCTRVRSPR*QHTYCP Trigger: CGGGCAGTAAGTATGTTGGCACCTGGGTGAACGGAC...CCGGGTGCAGTGCTGTGTGTATCTAGTTCCAGCTACTTGAGAGGCTGAGGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
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| CDS-3UTR GCA 90 bp | CAGTGGCGCGATCTCCACTCACTGCAACTGCCACTTTCTGGACTCAAGCAATCCGTCCGTTCACCCAGGTaGCAACATACTTACTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: QWRDLHSLQLPLSGLKQSVRSPR*QHTYCP Trigger: CGGGCAGTAAGTATGTTGGCACCTGGGTGAACGGAC...GGATTGCTTGAGTCCAGAAAGTGGCAGTTGCAGTGAGTGGAGATCGCGCCACTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291536.8 |
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| CDS-3UTR GCA 90 bp | CCTGCCTCAGCCTCTCAAGTAGCTGGAACTAGATACACACAGCACTGCACCCGGGTGCCGCAGGTCATTTaGCCACTCTCCTTCATATCT | + |
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Preference number: 4 (lower is better) Translates to: PASASQVAGTRYTQHCTRVPQVI*PLSFIS Trigger: AGATATGAAGGAGAGTGGGCAAATGACCTGCGGCAC...CCGGGTGCAGTGCTGTGTGTATCTAGTTCCAGCTACTTGAGAGGCTGAGGCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
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| CDS-3UTR CCA 90 bp | CCTGCCTCAGCCTCTCAAGTAGCTGGAACTAGATACACACAGCACTGCACCCGGCTTTTTGGGGAGAGTTaGTGTCCACAGGGCCAATTC | + |
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Preference number: 4 (lower is better) Translates to: PASASQVAGTRYTQHCTRLFGES*CPQGQF Trigger: GAATTGGCCCTGTGGACACCAACTCTCCCCAAAAAG...CCGGGTGCAGTGCTGTGTGTATCTAGTTCCAGCTACTTGAGAGGCTGAGGCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
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| CDS-3UTR GCA 90 bp | CAGTGGCGCGATCTCCACTCACTGCAACTGCCACTTTCTGGACTCAAGCAATCCGTGCCGCAGGTCATTTaGCCACTCTCCTTCATATCT | + |
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Preference number: 4 (lower is better) Translates to: QWRDLHSLQLPLSGLKQSVPQVI*PLSFIS Trigger: AGATATGAAGGAGAGTGGGCAAATGACCTGCGGCAC...GGATTGCTTGAGTCCAGAAAGTGGCAGTTGCAGTGAGTGGAGATCGCGCCACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291536.8 |
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| CDS-3UTR TCA 90 bp | CCTGCCTCAGCCTCTCAAGTAGCTGGAACTAGATACACACAGCACTGCACCCGGTTAGTCCTGGAGGTCTaGCTGTCTAGTTTCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: PASASQVAGTRYTQHCTRLVLEV*LSSFFF Trigger: GAAGAAGAAACTAGACAGTCAGACCTCCAGGACTAA...CCGGGTGCAGTGCTGTGTGTATCTAGTTCCAGCTACTTGAGAGGCTGAGGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
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| CDS-3UTR GCA 90 bp | CAGTGGCGCGATCTCCACTCACTGCAACTGCCACTTTCTGGACTCAAGCAATCCCCGCGTATAAATAGGTaGCTTGCCCATGCCTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: QWRDLHSLQLPLSGLKQSPRINR*LAHAFD Trigger: ATCAAAGGCATGGGCAAGGCACCTATTTATACGCGG...GGATTGCTTGAGTCCAGAAAGTGGCAGTTGCAGTGAGTGGAGATCGCGCCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291536.8 |
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| CDS-3UTR GCA 90 bp | CCTGCCTCAGCCTCTCAAGTAGCTGGAACTAGATACACACAGCACTGCACCCGGTGCCAACATACTTACTaGCCGTCTCCGCGTATAAAT | + |
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Preference number: 4 (lower is better) Translates to: PASASQVAGTRYTQHCTRCQHTY*PSPRIN Trigger: ATTTATACGCGGAGACGGGCAGTAAGTATGTTGGCA...CCGGGTGCAGTGCTGTGTGTATCTAGTTCCAGCTACTTGAGAGGCTGAGGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
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| CDS-3UTR CCA 90 bp | AGTGGCGCGATCTCCACTCACTGCAACTGCCACTTTCTGGACTCAAGCAATCCTGCAACTGCCACTTTCTaGACTCAAGCAATCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SGAISTHCNCHFLDSSNPATATF*TQAILL Trigger: CAGGAGGATTGCTTGAGTCCAGAAAGTGGCAGTTGC...AGGATTGCTTGAGTCCAGAAAGTGGCAGTTGCAGTGAGTGGAGATCGCGCCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291536.8 |
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| CDS-3UTR TCA 90 bp | GCGATCTCCACTCACTGCAACTGCCACTTTCTGGACTCAAGCAATCCTCCTGCCTTAGTCCTGGAGGTCTaGCTGTCTAGTTTCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: AISTHCNCHFLDSSNPPALVLEV*LSSFFF Trigger: GAAGAAGAAACTAGACAGTCAGACCTCCAGGACTAA...GGCAGGAGGATTGCTTGAGTCCAGAAAGTGGCAGTTGCAGTGAGTGGAGATCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291536.8 |
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| CDS-3UTR GCA 90 bp | GGCGCGATCTCCACTCACTGCAACTGCCACTTTCTGGACTCAAGCAATCCTCCTTGCCAACATACTTACTaGCCGTCTCCGCGTATAAAT | + |
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Preference number: 4 (lower is better) Translates to: GAISTHCNCHFLDSSNPPCQHTY*PSPRIN Trigger: ATTTATACGCGGAGACGGGCAGTAAGTATGTTGGCA...AGGAGGATTGCTTGAGTCCAGAAAGTGGCAGTTGCAGTGAGTGGAGATCGCGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291536.8 |
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| CDS-3UTR GCA 90 bp | CCTGCCTCAGCCTCTCAAGTAGCTGGAACTAGATACACACAGCACTGCACCCGGTTTTGTTCAAGAACTTaGCCTGGTACCTGTGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: PASASQVAGTRYTQHCTRFCSRT*PGTCGS Trigger: TGAACCACAGGTACCAGGGCAAGTTCTTGAACAAAA...CCGGGTGCAGTGCTGTGTGTATCTAGTTCCAGCTACTTGAGAGGCTGAGGCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
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| CDS-3UTR GCA 90 bp | CAGTGGCGCGATCTCCACTCACTGCAACTGCCACTTTCTGGACTCAAGCAATCCTTTTGTTCAAGAACTTaGCCTGGTACCTGTGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: QWRDLHSLQLPLSGLKQSFCSRT*PGTCGS Trigger: TGAACCACAGGTACCAGGGCAAGTTCTTGAACAAAA...GGATTGCTTGAGTCCAGAAAGTGGCAGTTGCAGTGAGTGGAGATCGCGCCACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291536.8 |
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| CDS-3UTR CCA 90 bp | CCTGCCTCAGCCTCTCAAGTAGCTGGAACTAGATACACACAGCACTGCACCCGGGCCAATTCAGTGATTTaGGTAGCTTTCCATTTTGGA | + |
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Preference number: 4 (lower is better) Translates to: PASASQVAGTRYTQHCTRANSVI*VAFHFG Trigger: TCCAAAATGGAAAGCTACCCAAATCACTGAATTGGC...CCGGGTGCAGTGCTGTGTGTATCTAGTTCCAGCTACTTGAGAGGCTGAGGCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
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| CDS-3UTR TCA 90 bp | CCTGCCTCAGCCTCTCAAGTAGCTGGAACTAGATACACACAGCACTGCACCCGGTGTAGGTGTCATTATTaGTGTAGTAGTATACGCCAT | + |
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Preference number: 4 (lower is better) Translates to: PASASQVAGTRYTQHCTRCRCHY*CSSIRH Trigger: ATGGCGTATACTACTACATCAATAATGACACCTACA...CCGGGTGCAGTGCTGTGTGTATCTAGTTCCAGCTACTTGAGAGGCTGAGGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
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| CDS-3UTR TCA 90 bp | GCGATCTCCACTCACTGCAACTGCCACTTTCTGGACTCAAGCAATCCTCCTGCCTGTAGGTGTCATTATTaGTGTAGTAGTATACGCCAT | + |
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Preference number: 4 (lower is better) Translates to: AISTHCNCHFLDSSNPPACRCHY*CSSIRH Trigger: ATGGCGTATACTACTACATCAATAATGACACCTACA...GGCAGGAGGATTGCTTGAGTCCAGAAAGTGGCAGTTGCAGTGAGTGGAGATCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291536.8 |
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| CDS-3UTR CCA 90 bp | CCTGCCTCAGCCTCTCAAGTAGCTGGAACTAGATACACACAGCACTGCACCCGGATATCTGGATCCATCTaGATATATAAAAGTGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: PASASQVAGTRYTQHCTRISGSI*IYKSAL Trigger: CAAGGCACTTTTATATATCCAGATGGATCCAGATAT...CCGGGTGCAGTGCTGTGTGTATCTAGTTCCAGCTACTTGAGAGGCTGAGGCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
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| CDS-3UTR CCA 90 bp | GCGATCTCCACTCACTGCAACTGCCACTTTCTGGACTCAAGCAATCCTCCTGCCATATCTGGATCCATCTaGATATATAAAAGTGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: AISTHCNCHFLDSSNPPAISGSI*IYKSAL Trigger: CAAGGCACTTTTATATATCCAGATGGATCCAGATAT...GGCAGGAGGATTGCTTGAGTCCAGAAAGTGGCAGTTGCAGTGAGTGGAGATCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291536.8 |
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| CDS CCA 90 bp | CATTCTCTCCCTCCTCCTCCAACTCCTCCGAGCCCAGGTCCGACATaGTCTCGCCCCAGCCTGGATCACAGCCGCAGCGCCTCTAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: HSLPPPPTPPSPGPT*SRPSLDHSRSASSR Trigger: CCTGCTAGAGGCGCTGCGGCTGTGATCCAGGCTGGGGCGAGACCATGTCGGACCTGGGCTCGGAGGAGTTGGAGGAGGAGGGAGAGAATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS CCA 90 bp | GCCCCAAGCACAGGACATTGCCAGAGGCACAGAGGACAGGCCAGCTaGACAGAGGCAAGCCTCCTGTGTGTCAGCTGCTTTCCCCAGGGA | + |
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Preference number: 5 (lower is better) Translates to: APSTGHCQRHRGQAS*TEASLLCVSCFPQG Trigger: TCCCTGGGGAAAGCAGCTGACACACAGGAGGCTTGCCTCTGTCCAGCTGGCCTGTCCTCTGTGCCTCTGGCAATGTCCTGTGCTTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS CCA 90 bp | GGGCAAGAGGAACCACCGAGTCTTCCAAACAGAAACGGCCCACCATaGGTGCTAGAAGCTGGCAAGCCTCCAGACGCAGGGCCAGGCCCT | + |
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Preference number: 5 (lower is better) Translates to: GQEEPPSLPNRNGPP*VLEAGKPPDAGPGP Trigger: AGGGCCTGGCCCTGCGTCTGGAGGCTTGCCAGCTTCTAGCACCCATGGTGGGCCGTTTCTGTTTGGAAGACTCGGTGGTTCCTCTTGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS GCA 90 bp | GAACTCCTCCTGGTCATACTCCCGGCTCTCTTCCCGGAGGACGTCTaGATCTTCATCTCCAGGCCTCATGTCCATCTCACCCTCGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: ELLLVILPALFPEDV*IFISRPHVHLTLEA Trigger: GGCTTCGAGGGTGAGATGGACATGAGGCCTGGAGATGAAGATGCAGACGTCCTCCGGGAAGAGAGCCGGGAGTATGACCAGGAGGAGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291536.8 ENST00000398352.3 ENST00000493019.1 |
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| CDS CCA 90 bp | CATGTCTTTTACCGAATTCGTAGCTCCCTTCGTAGGTGTCCCCGTTaGGTAGCCGTGCCCTCCCACGTCCGTGCCTTTCGCCTGCCTCAT | + |
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Preference number: 5 (lower is better) Translates to: HVFYRIRSSLRRCPR*VAVPSHVRAFRLPH Trigger: ATGAGGCAGGCGAAAGGCACGGACGTGGGAGGGCACGGCTACCCAACGGGGACACCTACGAAGGGAGCTACGAATTCGGTAAAAGACATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000493019.1 |
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| CDS-3UTR CAA 90 bp | CCTGCCTCAGCCTCTCAAGTAGCTGGAACTAGATACACACAGCACTGCACCCGGAGCTCCTGGAGCGTCTaGGCCAGGTCCATCCGTAGA | + |
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Preference number: 5 (lower is better) Translates to: PASASQVAGTRYTQHCTRSSWSV*ARSIRR Trigger: TCTACGGATGGACCTGGCCAAGACGCTCCAGGAGCT...CCGGGTGCAGTGCTGTGTGTATCTAGTTCCAGCTACTTGAGAGGCTGAGGCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
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| CDS GCA 90 bp | CCGTGCCCTCCTGCTGTCCGTTCACCCAGGTGCCAACATACTTACTaGCCGTCTCCGCGTATAAATAGGTGCCTTGCCCATGCCTGGTTA | + |
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Preference number: 5 (lower is better) Translates to: PCPPAVRSPRCQHTY*PSPRINRCLAHAWL Trigger: TAACCAGGCATGGGCAAGGCACCTATTTATACGCGGAGACGGGCAGTAAGTATGTTGGCACCTGGGTGAACGGACAGCAGGAGGGCACGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS GCA 90 bp | CCGTGCCCTCCTGCTGTCCGTTCACCCAGGTGCCAACATACTTACTaGCCGTCTCCGCGTATAAATAGGTGCCTTGCCCATGCCTTTGAT | + |
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Preference number: 5 (lower is better) Translates to: PCPPAVRSPRCQHTY*PSPRINRCLAHAFD Trigger: ATCAAAGGCATGGGCAAGGCACCTATTTATACGCGGAGACGGGCAGTAAGTATGTTGGCACCTGGGTGAACGGACAGCAGGAGGGCACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
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| CDS GCA 90 bp | AGCTTCTATATCTGTGTCCAGTCAGAAGGTGCCCCTTGCTCAGTGTaGCCCAAGCACAGGACATTGCCAGAGGCACAGAGGACAGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: SFYICVQSEGAPCSV*PKHRTLPEAQRTGQ Trigger: CTGGCCTGTCCTCTGTGCCTCTGGCAATGTCCTGTGCTTGGGGCACACTGAGCAAGGGGCACCTTCTGACTGGACACAGATATAGAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS-3UTR CAA 90 bp | CCTGCCTCAGCCTCTCAAGTAGCTGGAACTAGATACACACAGCACTGCACCCGGCGTGCCGCAGGTCATTaGCCCACTCTCCTTCATATC | + |
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Preference number: 5 (lower is better) Translates to: PASASQVAGTRYTQHCTRRAAGH*PTLLHI Trigger: GATATGAAGGAGAGTGGGCAAATGACCTGCGGCACG...CCGGGTGCAGTGCTGTGTGTATCTAGTTCCAGCTACTTGAGAGGCTGAGGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
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| CDS-3UTR CAA 90 bp | CCTGCCTCAGCCTCTCAAGTAGCTGGAACTAGATACACACAGCACTGCACCCGGGCCTTGCCCATGCCTTaGATGAGCAAACCACTCTCC | + |
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Preference number: 5 (lower is better) Translates to: PASASQVAGTRYTQHCTRALPMP*MSKPLS Trigger: GGAGAGTGGTTTGCTCATCAAAGGCATGGGCAAGGC...CCGGGTGCAGTGCTGTGTGTATCTAGTTCCAGCTACTTGAGAGGCTGAGGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
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| CDS-3UTR CAA 90 bp | CCTGCCTCAGCCTCTCAAGTAGCTGGAACTAGATACACACAGCACTGCACCCGGGTAGAGGTCGGCTTTTaGGGGAGAGTTGGTGTCCAC | + |
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Preference number: 5 (lower is better) Translates to: PASASQVAGTRYTQHCTRVEVGF*GRVGVH Trigger: GTGGACACCAACTCTCCCCAAAAAGCCGACCTCTAC...CCGGGTGCAGTGCTGTGTGTATCTAGTTCCAGCTACTTGAGAGGCTGAGGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
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| CDS TCA 90 bp | GATTTTTGTTCAAGAACTTGCCCTGGTACCTGTGGTTCAGGTGAATaGGCTCGGCCGTGCCCTCCTGCTGTCCGTTCACCCAGGTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: DFCSRTCPGTCGSGE*ARPCPPAVRSPRCQ Trigger: TTGGCACCTGGGTGAACGGACAGCAGGAGGGCACGGCCGAGCTCATTCACCTGAACCACAGGTACCAGGGCAAGTTCTTGAACAAAAATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
||
| CDS TCA 90 bp | ACAGGATTTTTGTTCAAGAACTTGCCCTGGTACCTGTGGTTCAGGTaGATGAGCTCGGCCGTGCCCTCCTGCTGTCCGTTCACCCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TGFLFKNLPWYLWFR*MSSAVPSCCPFTQV Trigger: CACCTGGGTGAACGGACAGCAGGAGGGCACGGCCGAGCTCATTCACCTGAACCACAGGTACCAGGGCAAGTTCTTGAACAAAAATCCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
||
| CDS TCA 90 bp | CATTTTTGTTCAAGAACTTGCCCTGGTACCTGTGGTTCAGGTGAATaGGCTCGGCCGTGCCCTCCTGCTGTCCGTTCACCCAGGTGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: HFCSRTCPGTCGSGE*ARPCPPAVRSPRCQ Trigger: TTGGCACCTGGGTGAACGGACAGCAGGAGGGCACGGCCGAGCTCATTCACCTGAACCACAGGTACCAGGGCAAGTTCTTGAACAAAAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000493019.1 |
||
| CDS-3UTR CAA 90 bp | GCGATCTCCACTCACTGCAACTGCCACTTTCTGGACTCAAGCAATCCTCCTGCCCGTGCCGCAGGTCATTaGCCCACTCTCCTTCATATC | + |
|
Preference number: 5 (lower is better) Translates to: AISTHCNCHFLDSSNPPARAAGH*PTLLHI Trigger: GATATGAAGGAGAGTGGGCAAATGACCTGCGGCACG...GGCAGGAGGATTGCTTGAGTCCAGAAAGTGGCAGTTGCAGTGAGTGGAGATCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291536.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCCTCAGCCTCTCAAGTAGCTGGAACTAGATACACACAGCACTGCACCCGGGCTTTTTGGGGAGAGTaGGTGTCCACAGGGCCAATT | + |
|
Preference number: 5 (lower is better) Translates to: PASASQVAGTRYTQHCTRAFWGE*VSTGPI Trigger: AATTGGCCCTGTGGACACCAACTCTCCCCAAAAAGC...CCGGGTGCAGTGCTGTGTGTATCTAGTTCCAGCTACTTGAGAGGCTGAGGCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
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| CDS TCA 90 bp | CTTACATTTTTGTTCAAGAACTTGCCCTGGTACCTGTGGTTCAGGTaGATGAGCTCGGCCGTGCCCTCCTGCTGTCCGTTCACCCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LTFLFKNLPWYLWFR*MSSAVPSCCPFTQV Trigger: CACCTGGGTGAACGGACAGCAGGAGGGCACGGCCGAGCTCATTCACCTGAACCACAGGTACCAGGGCAAGTTCTTGAACAAAAATGTAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS GCA 90 bp | AAGCGATGTAGCTTCTATATCTGTGTCCAGTCAGAAGGTGCCCCTTaGTCAGTGTGCCCCAAGCACAGGACATTGCCAGAGGCACAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KRCSFYICVQSEGAP*SVCPKHRTLPEAQR Trigger: CCTCTGTGCCTCTGGCAATGTCCTGTGCTTGGGGCACACTGAGCAAGGGGCACCTTCTGACTGGACACAGATATAGAAGCTACATCGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493019.1 |
||
| CDS-3UTR CAA 90 bp | CCTGCCTCAGCCTCTCAAGTAGCTGGAACTAGATACACACAGCACTGCACCCGGGGGCCAACAGGATTTTaGTTCAAGAACTTGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PASASQVAGTRYTQHCTRGPTGF*FKNLPW Trigger: CCAGGGCAAGTTCTTGAACAAAAATCCTGTTGGCCC...CCGGGTGCAGTGCTGTGTGTATCTAGTTCCAGCTACTTGAGAGGCTGAGGCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
||
| CDS-3UTR CAA 90 bp | GGCGCGATCTCCACTCACTGCAACTGCCACTTTCTGGACTCAAGCAATCCTCCTGCTTTTTGGGGAGAGTaGGTGTCCACAGGGCCAATT | + |
|
Preference number: 5 (lower is better) Translates to: GAISTHCNCHFLDSSNPPAFWGE*VSTGPI Trigger: AATTGGCCCTGTGGACACCAACTCTCCCCAAAAAGC...AGGAGGATTGCTTGAGTCCAGAAAGTGGCAGTTGCAGTGAGTGGAGATCGCGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000291536.8 |
||
| CDS GCA 90 bp | CCCAGGTGCCAACATACTTACTGCCCGTCTCCGCGTATAAATAGGTaGCTTGCCCATGCCTGGTTAAGACAAGGGGAACATGGTATTTCG | + |
|
Preference number: 5 (lower is better) Translates to: PRCQHTYCPSPRINR*LAHAWLRQGEHGIS Trigger: CGAAATACCATGTTCCCCTTGTCTTAACCAGGCATGGGCAAGGCACCTATTTATACGCGGAGACGGGCAGTAAGTATGTTGGCACCTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493019.1 |
||
| CDS CCA 90 bp | GTCTTGGCCAGGTCCATCCGTAGAGGTCGGCTTTTTGGGGAGAGTTaGTGTCCACAGGGCCAATTCAGTGATTTGGGTAGCTTTCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: VLARSIRRGRLFGES*CPQGQFSDLGSFPF Trigger: AAATGGAAAGCTACCCAAATCACTGAATTGGCCCTGTGGACACCAACTCTCCCCAAAAAGCCGACCTCTACGGATGGACCTGGCCAAGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000291536.8 ENST00000398352.3 ENST00000493019.1 |
||
| CDS-3UTR CAA 90 bp | AGTGGCGCGATCTCCACTCACTGCAACTGCCACTTTCTGGACTCAAGCAATCCTGGGCCAACAGGATTTTaGTTCAAGAACTTGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SGAISTHCNCHFLDSSNPGPTGF*FKNLPW Trigger: CCAGGGCAAGTTCTTGAACAAAAATCCTGTTGGCCC...AGGATTGCTTGAGTCCAGAAAGTGGCAGTTGCAGTGAGTGGAGATCGCGCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291536.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCCTCAGCCTCTCAAGTAGCTGGAACTAGATACACACAGCACTGCACCCGGGGCCAATTCAGTGATTaGGGTAGCTTTCCATTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: PASASQVAGTRYTQHCTRGQFSD*GSFPFW Trigger: CCAAAATGGAAAGCTACCCAAATCACTGAATTGGCC...CCGGGTGCAGTGCTGTGTGTATCTAGTTCCAGCTACTTGAGAGGCTGAGGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
||
| CDS GCA 90 bp | TGGGACTCTTGGGTGAAAGACTCACGTGCTCTGCCCCAACTGAGGTaGAGATGTCAGATACTTGAGTCTACACTTGCACAGAAAGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: WDSWVKDSRALPQLR*RCQILESTLAQKGI Trigger: GATGCCTTTCTGTGCAAGTGTAGACTCAAGTATCTGACATCTGCACCTCAGTTGGGGCAGAGCACGTGAGTCTTTCACCCAAGAGTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493019.1 |
||
| CDS-3UTR CAA 90 bp | GGCGCGATCTCCACTCACTGCAACTGCCACTTTCTGGACTCAAGCAATCCTCCTGGCCAATTCAGTGATTaGGGTAGCTTTCCATTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GAISTHCNCHFLDSSNPPGQFSD*GSFPFW Trigger: CCAAAATGGAAAGCTACCCAAATCACTGAATTGGCC...AGGAGGATTGCTTGAGTCCAGAAAGTGGCAGTTGCAGTGAGTGGAGATCGCGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000291536.8 |
||
| CDS TCA 90 bp | CATGCCTTTGATGAGCAAACCACTCTCCAGTGTAGGTGTCATTATTaGTGTAGTAGTATACGCCATGGCCGTGCCGCAGGTCATTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HAFDEQTTLQCRCHY*CSSIRHGRAAGHLP Trigger: GGGCAAATGACCTGCGGCACGGCCATGGCGTATACTACTACATCAATAATGACACCTACACTGGAGAGTGGTTTGCTCATCAAAGGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
||
| CDS TCA 90 bp | CGAACCTTTGATGAGCAAACCACTCTCCAGTGTAGGTGTCATTATTaGTGTAGTAGTATACGCCATGGCCGTGCCGCAGGTCATTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RTFDEQTTLQCRCHY*CSSIRHGRAAGHLP Trigger: GGGCAAATGACCTGCGGCACGGCCATGGCGTATACTACTACATCAATAATGACACCTACACTGGAGAGTGGTTTGCTCATCAAAGGTTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493019.1 |
||
| CDS TCA 90 bp | AGACTCACGTGCTCTGCCCCAACTGAGGTGCAGATGTCAGATACTTaGGTCTACACTTGCACAGAAAGGCATCCTTGCCTCAAAGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: RLTCSAPTEVQMSDT*VYTCTERHPCLKAI Trigger: TATGGCTTTGAGGCAAGGATGCCTTTCTGTGCAAGTGTAGACTCAAGTATCTGACATCTGCACCTCAGTTGGGGCAGAGCACGTGAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS CCA 90 bp | ACTTACTGCCCGTCTCCGCGTATAAATAGGTGCCTTGCCCATGCCTaGTTAAGACAAGGGGAACATGGTATTTCGTTCCAGCACAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: TYCPSPRINRCLAHA*LRQGEHGISFQHSE Trigger: TTCACTGTGCTGGAACGAAATACCATGTTCCCCTTGTCTTAACCAGGCATGGGCAAGGCACCTATTTATACGCGGAGACGGGCAGTAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493019.1 |
||
| CDS-3UTR CAA 90 bp | CCTGCCTCAGCCTCTCAAGTAGCTGGAACTAGATACACACAGCACTGCACCCGGACGATATTCACCATGTaGTTCACACCCAACATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PASASQVAGTRYTQHCTRTIFTM*FTPNIK Trigger: TTTGATGTTGGGTGTGAACAACATGGTGAATATCGT...CCGGGTGCAGTGCTGTGTGTATCTAGTTCCAGCTACTTGAGAGGCTGAGGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
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| CDS CCA 90 bp | CTCTCGTGTTATATAACAATGCAACAGGTCCCCGCTGAAAGACAGTaGGAATTTGTACTGAGATCCAGAGAAACGGGCCAATCCCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSCYITMQQVPAERQ*EFVLRSRETGQSLP Trigger: AGGGAGGGATTGGCCCGTTTCTCTGGATCTCAGTACAAATTCCCACTGTCTTTCAGCGGGGACCTGTTGCATTGTTATATAACACGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS-3UTR CAA 90 bp | GGCGCGATCTCCACTCACTGCAACTGCCACTTTCTGGACTCAAGCAATCCTCCTACGATATTCACCATGTaGTTCACACCCAACATCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GAISTHCNCHFLDSSNPPTIFTM*FTPNIK Trigger: TTTGATGTTGGGTGTGAACAACATGGTGAATATCGT...AGGAGGATTGCTTGAGTCCAGAAAGTGGCAGTTGCAGTGAGTGGAGATCGCGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000291536.8 |
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| CDS TCA 90 bp | TTCAGATGCCCTCTCGTGTTATATAACAATGCAACAGGTCCCCGCTaGAAGACAGTGGGAATTTGTACTGAGATCCAGAGAAACGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FRCPLVLYNNATGPR*KTVGICTEIQRNGP Trigger: TGGCCCGTTTCTCTGGATCTCAGTACAAATTCCCACTGTCTTTCAGCGGGGACCTGTTGCATTGTTATATAACACGAGAGGGCATCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS TCA 90 bp | TACCAGAGGCTCAGAGAATGGCACAGCTGTCCTGTTCTCCACATTTaGATAGGCCGGACTCAGTTTTCTCTGAGTTTTTGGTATTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: YQRLREWHSCPVLHI*IGRTQFSLSFWYSL Trigger: CAGAGAATACCAAAAACTCAGAGAAAACTGAGTCCGGCCTATTCAAATGTGGAGAACAGGACAGCTGTGCCATTCTCTGAGCCTCTGGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS GCA 90 bp | ACACCATCAATTTGCTCCGCAAATTCTCTCTTCAGGGAAAGTTTCTaGTCAACCCCTGATCAAAGCTACCACGATGGCCTGAGTATTAGC | + |
|
Preference number: 5 (lower is better) Translates to: TPSICSANSLFRESF*STPDQSYHDGLSIS Trigger: GCTAATACTCAGGCCATCGTGGTAGCTTTGATCAGGGGTTGAGCAGAAACTTTCCCTGAAGAGAGAATTTGCGGAGCAAATTGATGGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS TCA 90 bp | GGGCCAACAGGCCCGATTTTTCAGACTGGTTTAGGCTGGACAAGCTaGTTGATTCTTCCAGATTCATTTTCATCAAATTCTCTTCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GPTGPIFQTGLGWTS*LILPDSFSSNSLPL Trigger: CAGAGGAAGAGAATTTGATGAAAATGAATCTGGAAGAATCAATCAGCTTGTCCAGCCTAAACCAGTCTGAAAAATCGGGCCTGTTGGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS GCA 90 bp | ATGTCGCACCTCCCCTTCCAGGGAAACAAAACCCAAACACCTCTATaGTCAATTGCAGGAAATAGATATTTGGTATCTGATTTACCCATG | + |
|
Preference number: 5 (lower is better) Translates to: MSHLPFQGNKTQTPL*SIAGNRYLVSDLPM Trigger: CATGGGTAAATCAGATACCAAATATCTATTTCCTGCAATTGAGCATAGAGGTGTTTGGGTTTTGTTTCCCTGGAAGGGGAGGTGCGACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS GCA 90 bp | GTATCAGCTAAACATTCCCTCTGTCAACTTCTAACACCATCAATTTaGTCCGCAAATTCTCTCTTCAGGGAAAGTTTCTGCTCAACCCCT | + |
|
Preference number: 5 (lower is better) Translates to: VSAKHSLCQLLTPSI*SANSLFRESFCSTP Trigger: AGGGGTTGAGCAGAAACTTTCCCTGAAGAGAGAATTTGCGGAGCAAATTGATGGTGTTAGAAGTTGACAGAGGGAATGTTTAGCTGATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS TCA 90 bp | GGGAAAGTTTCTGCTCAACCCCTGATCAAAGCTACCACGATGGCCTaGGTATTAGCTTCTGAATTATTCAAGGTTTCTCTGTACAATAAG | + |
|
Preference number: 5 (lower is better) Translates to: GKVSAQPLIKATTMA*VLASELFKVSLYNK Trigger: CTTATTGTACAGAGAAACCTTGAATAATTCAGAAGCTAATACTCAGGCCATCGTGGTAGCTTTGATCAGGGGTTGAGCAGAAACTTTCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS CCA 90 bp | CTCAAAGCCATAGAAAGATTGGACCTGCCTGGCAGAGTTGGTAACTaGGCTTTTGTTATGATTCTGTTCCTCAGTAAGTGTAAACAATCT | + |
|
Preference number: 5 (lower is better) Translates to: LKAIERLDLPGRVGN*AFVMILFLSKCKQS Trigger: AGATTGTTTACACTTACTGAGGAACAGAATCATAACAAAAGCCCAGTTACCAACTCTGCCAGGCAGGTCCAATCTTTCTATGGCTTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS TCA 90 bp | TATGCTCAATTGCAGGAAATAGATATTTGGTATCTGATTTACCCATaGGAAGGAATACACACAAGAGGTTCAGATGCCCTCTCGTGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: YAQLQEIDIWYLIYP*EGIHTRGSDALSCY Trigger: ATAACACGAGAGGGCATCTGAACCTCTTGTGTGTATTCCTTCTCATGGGTAAATCAGATACCAAATATCTATTTCCTGCAATTGAGCATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS TCA 90 bp | CACTCTCCTTCATATCTGGATCCATCTGGATATATAAAAGTGCCTTaGCCGTGCTTTTTATTTCTAACATATTCTCCGATATATCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HSPSYLDPSGYIKVP*PCFLFLTYSPIYRA Trigger: TGCTCGATATATCGGAGAATATGTTAGAAATAAAAAGCACGGTCAAGGCACTTTTATATATCCAGATGGATCCAGATATGAAGGAGAGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000291536.8 ENST00000398352.3 ENST00000493019.1 |
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| CDS CCA 72 bp | CCTCCTCCTCCAACTCCTCCGAGCCCAGGTCCGACATaGTCTCGCCCCAGCCTGGATCACAGCCGCAGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: PPPPTPPSPGPT*SRPSLDHSRSA Trigger: GGCGCTGCGGCTGTGATCCAGGCTGGGGCGAGACCATGTCGGACCTGGGCTCGGAGGAGTTGGAGGAGGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000493019.1 |
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| CDS CCA 72 bp | TACCGAATTCGTAGCTCCCTTCGTAGGTGTCCCCGTTaGGTAGCCGTGCCCTCCCACGTCCGTGCCTTTCGC | + |
|
Preference number: 6 (lower is better) Translates to: YRIRSSLRRCPR*VAVPSHVRAFR Trigger: GCGAAAGGCACGGACGTGGGAGGGCACGGCTACCCAACGGGGACACCTACGAAGGGAGCTACGAATTCGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000493019.1 |
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| CDS CAA 72 bp | CCCGGGTTCTCCTGCACTCTCAGCTCCTGGAGCGTCTaGGCCAGGTCCATCCGTAGAGGTCGGCTTTTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PGFSCTLSSWSV*ARSIRRGRLFG Trigger: CCCAAAAAGCCGACCTCTACGGATGGACCTGGCCAAGACGCTCCAGGAGCTGAGAGTGCAGGAGAACCCGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000291536.8 ENST00000398352.3 ENST00000493019.1 |
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| CDS TCA 72 bp | TCAAGAACTTGCCCTGGTACCTGTGGTTCAGGTGAATaGGCTCGGCCGTGCCCTCCTGCTGTCCGTTCACCC | + |
|
Preference number: 6 (lower is better) Translates to: SRTCPGTCGSGE*ARPCPPAVRSP Trigger: GGGTGAACGGACAGCAGGAGGGCACGGCCGAGCTCATTCACCTGAACCACAGGTACCAGGGCAAGTTCTTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291536.8 ENST00000398352.3 ENST00000493019.1 |
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| CDS GCA 72 bp | GCTCGGCCGTGCCCTCCTGCTGTCCGTTCACCCAGGTaGCAACATACTTACTGCCCGTCTCCGCGTATAAAT | + |
|
Preference number: 6 (lower is better) Translates to: ARPCPPAVRSPR*QHTYCPSPRIN Trigger: ATTTATACGCGGAGACGGGCAGTAAGTATGTTGGCACCTGGGTGAACGGACAGCAGGAGGGCACGGCCGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291536.8 ENST00000398352.3 ENST00000493019.1 |
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| CDS CCA 72 bp | GAACCACCGAGTCTTCCAAACAGAAACGGCCCACCATaGGTGCTAGAAGCTGGCAAGCCTCCAGACGCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: EPPSLPNRNGPP*VLEAGKPPDAG Trigger: CCCTGCGTCTGGAGGCTTGCCAGCTTCTAGCACCCATGGTGGGCCGTTTCTGTTTGGAAGACTCGGTGGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS GCA 72 bp | CTGGTCATACTCCCGGCTCTCTTCCCGGAGGACGTCTaGATCTTCATCTCCAGGCCTCATGTCCATCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: LVILPALFPEDV*IFISRPHVHLT Trigger: GGTGAGATGGACATGAGGCCTGGAGATGAAGATGCAGACGTCCTCCGGGAAGAGAGCCGGGAGTATGACCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291536.8 ENST00000398352.3 ENST00000493019.1 |
||
| CDS GCA 72 bp | ATCTGTGTCCAGTCAGAAGGTGCCCCTTGCTCAGTGTaGCCCAAGCACAGGACATTGCCAGAGGCACAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ICVQSEGAPCSV*PKHRTLPEAQR Trigger: CCTCTGTGCCTCTGGCAATGTCCTGTGCTTGGGGCACACTGAGCAAGGGGCACCTTCTGACTGGACACAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493019.1 |
||
| CDS CAA 72 bp | GCGTCTTGGCCAGGTCCATCCGTAGAGGTCGGCTTTTaGGGGAGAGTTGGTGTCCACAGGGCCAATTCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ASWPGPSVEVGF*GRVGVHRANSV Trigger: CACTGAATTGGCCCTGTGGACACCAACTCTCCCCAAAAAGCCGACCTCTACGGATGGACCTGGCCAAGACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000291536.8 ENST00000398352.3 ENST00000493019.1 |
||
| CDS CAA 90 bp | GCTCCTGGAGCGTCTTGGCCAGGTCCATCCGTAGAGGTCGGCTTTTaGGGGAGAGTTGGTGTCCACAGGGCCAATTCAGTGATTTGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: APGASWPGPSVEVGF*GRVGVHRANSVIWV Trigger: TACCCAAATCACTGAATTGGCCCTGTGGACACCAACTCTCCCCAAAAAGCCGACCTCTACGGATGGACCTGGCCAAGACGCTCCAGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000291536.8 ENST00000398352.3 ENST00000493019.1 |
||
| CDS TCA 72 bp | TTGTTCAAGAACTTGCCCTGGTACCTGTGGTTCAGGTaGATGAGCTCGGCCGTGCCCTCCTGCTGTCCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: LFKNLPWYLWFR*MSSAVPSCCPF Trigger: GAACGGACAGCAGGAGGGCACGGCCGAGCTCATTCACCTGAACCACAGGTACCAGGGCAAGTTCTTGAACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291536.8 ENST00000398352.3 ENST00000493019.1 |
||
| CDS GCA 72 bp | CCTGCTGTCCGTTCACCCAGGTGCCAACATACTTACTaGCCGTCTCCGCGTATAAATAGGTGCCTTGCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: PAVRSPRCQHTY*PSPRINRCLAH Trigger: ATGGGCAAGGCACCTATTTATACGCGGAGACGGGCAGTAAGTATGTTGGCACCTGGGTGAACGGACAGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291536.8 ENST00000398352.3 ENST00000493019.1 |
||
| CDS GCA 72 bp | CTCCACTCCCTGGGACTCTTGGGTGAAAGACTCACGTaGTCTGCCCCAACTGAGGTGCAGATGTCAGATACT | + |
|
Preference number: 6 (lower is better) Translates to: LHSLGLLGERLT*SAPTEVQMSDT Trigger: AGTATCTGACATCTGCACCTCAGTTGGGGCAGAGCACGTGAGTCTTTCACCCAAGAGTCCCAGGGAGTGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493019.1 |
||
| CDS TCA 72 bp | AACAGGTCCCCGCTGAAAGACAGTGGGAATTTGTACTaGGATCCAGAGAAACGGGCCAATCCCTCCCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: NRSPLKDSGNLY*DPEKRANPSLP Trigger: GGGAAGGGAGGGATTGGCCCGTTTCTCTGGATCTCAGTACAAATTCCCACTGTCTTTCAGCGGGGACCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493019.1 |
||
| CDS CCA 72 bp | AGGTCCATCCGTAGAGGTCGGCTTTTTGGGGAGAGTTaGTGTCCACAGGGCCAATTCAGTGATTTGGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: RSIRRGRLFGES*CPQGQFSDLGS Trigger: GCTACCCAAATCACTGAATTGGCCCTGTGGACACCAACTCTCCCCAAAAAGCCGACCTCTACGGATGGACCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000291536.8 ENST00000398352.3 ENST00000493019.1 |
||
| CDS TCA 72 bp | TGCTCTGCCCCAACTGAGGTGCAGATGTCAGATACTTaGGTCTACACTTGCACAGAAAGGCATCCTTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: CSAPTEVQMSDT*VYTCTERHPCL Trigger: GAGGCAAGGATGCCTTTCTGTGCAAGTGTAGACTCAAGTATCTGACATCTGCACCTCAGTTGGGGCAGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS GCA 72 bp | TGGGTGAAAGACTCACGTGCTCTGCCCCAACTGAGGTaGAGATGTCAGATACTTGAGTCTACACTTGCACAG | + |
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Preference number: 6 (lower is better) Translates to: WVKDSRALPQLR*RCQILESTLAQ Trigger: CTGTGCAAGTGTAGACTCAAGTATCTGACATCTGCACCTCAGTTGGGGCAGAGCACGTGAGTCTTTCACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS CCA 72 bp | CCGTCTCCGCGTATAAATAGGTGCCTTGCCCATGCCTaGTTAAGACAAGGGGAACATGGTATTTCGTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: PSPRINRCLAHA*LRQGEHGISFQ Trigger: CTGGAACGAAATACCATGTTCCCCTTGTCTTAACCAGGCATGGGCAAGGCACCTATTTATACGCGGAGACGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS TCA 72 bp | GATGAGCAAACCACTCTCCAGTGTAGGTGTCATTATTaGTGTAGTAGTATACGCCATGGCCGTGCCGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: DEQTTLQCRCHY*CSSIRHGRAAG Trigger: ACCTGCGGCACGGCCATGGCGTATACTACTACATCAATAATGACACCTACACTGGAGAGTGGTTTGCTCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000291536.8 ENST00000398352.3 ENST00000493019.1 |
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| CDS GCA 72 bp | CAACATACTTACTGCCCGTCTCCGCGTATAAATAGGTaGCTTGCCCATGCCTTTGATGAGCAAACCACTCTC | + |
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Preference number: 6 (lower is better) Translates to: QHTYCPSPRINR*LAHAFDEQTTL Trigger: GAGAGTGGTTTGCTCATCAAAGGCATGGGCAAGGCACCTATTTATACGCGGAGACGGGCAGTAAGTATGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000291536.8 ENST00000398352.3 |
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| CDS CAA 90 bp | GCAGATGTCAGATACTTGAGTCTACACTTGCACAGAAAGGCATCCTaGCCTCAAAGCCATAGAAAGATTGGACCTGCCTGGCAGAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: ADVRYLSLHLHRKAS*PQSHRKIGPAWQSW Trigger: CCAACTCTGCCAGGCAGGTCCAATCTTTCTATGGCTTTGAGGCAAGGATGCCTTTCTGTGCAAGTGTAGACTCAAGTATCTGACATCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS CAA 90 bp | GTACCAGAGGCTCAGAGAATGGCACAGCTGTCCTGTTCTCCACATTaGAATAGGCCGGACTCAGTTTTCTCTGAGTTTTTGGTATTCTCT | + |
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Preference number: 6 (lower is better) Translates to: VPEAQRMAQLSCSPH*NRPDSVFSEFLVFS Trigger: AGAGAATACCAAAAACTCAGAGAAAACTGAGTCCGGCCTATTCAAATGTGGAGAACAGGACAGCTGTGCCATTCTCTGAGCCTCTGGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS CCA 72 bp | ATACTTTCCAGGGCCAACAGGCCCGATTTTTCAGACTaGTTTAGGCTGGACAAGCTGATTGATTCTTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: ILSRANRPDFSD*FRLDKLIDSSR Trigger: TCTGGAAGAATCAATCAGCTTGTCCAGCCTAAACCAGTCTGAAAAATCGGGCCTGTTGGCCCTGGAAAGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS CAA 72 bp | GTCACACATTTGCACAGGCTGCCAGAGGGGGTTATTTaGTACTTCATTGGCAAATGTCACTTCCCATGGACT | + |
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Preference number: 6 (lower is better) Translates to: VTHLHRLPEGVI*YFIGKCHFPWT Trigger: AGTCCATGGGAAGTGACATTTGCCAATGAAGTACAAAATAACCCCCTCTGGCAGCCTGTGCAAATGTGTGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS TCA 72 bp | CCTCTCGTGTTATATAACAATGCAACAGGTCCCCGCTaGAAGACAGTGGGAATTTGTACTGAGATCCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: PLVLYNNATGPR*KTVGICTEIQR Trigger: TCTCTGGATCTCAGTACAAATTCCCACTGTCTTTCAGCGGGGACCTGTTGCATTGTTATATAACACGAGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS CAA 72 bp | CATTTGAATAGGCCGGACTCAGTTTTCTCTGAGTTTTaGGTATTCTCTGGTCACACATTTGCACAGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: HLNRPDSVFSEF*VFSGHTFAQAA Trigger: GGCAGCCTGTGCAAATGTGTGACCAGAGAATACCAAAAACTCAGAGAAAACTGAGTCCGGCCTATTCAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS TCA 72 bp | TCTGCTCAACCCCTGATCAAAGCTACCACGATGGCCTaGGTATTAGCTTCTGAATTATTCAAGGTTTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: SAQPLIKATTMA*VLASELFKVSL Trigger: CAGAGAAACCTTGAATAATTCAGAAGCTAATACTCAGGCCATCGTGGTAGCTTTGATCAGGGGTTGAGCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS GCA 72 bp | TTACCCATGAGAAGGAATACACACAAGAGGTTCAGATaGCCTCTCGTGTTATATAACAATGCAACAGGTCCC | + |
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Preference number: 6 (lower is better) Translates to: LPMRRNTHKRFR*PLVLYNNATGP Trigger: GGGACCTGTTGCATTGTTATATAACACGAGAGGGCATCTGAACCTCTTGTGTGTATTCCTTCTCATGGGTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS CCA 72 bp | ATAGAAAGATTGGACCTGCCTGGCAGAGTTGGTAACTaGGCTTTTGTTATGATTCTGTTCCTCAGTAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: IERLDLPGRVGN*AFVMILFLSKC Trigger: ACACTTACTGAGGAACAGAATCATAACAAAAGCCCAGTTACCAACTCTGCCAGGCAGGTCCAATCTTTCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS CAA 90 bp | TATTCTCTGGTCACACATTTGCACAGGCTGCCAGAGGGGGTTATTTaGTACTTCATTGGCAAATGTCACTTCCCATGGACTTACATTTTT | + |
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Preference number: 6 (lower is better) Translates to: YSLVTHLHRLPEGVI*YFIGKCHFPWTYIF Trigger: AAAAATGTAAGTCCATGGGAAGTGACATTTGCCAATGAAGTACAAAATAACCCCCTCTGGCAGCCTGTGCAAATGTGTGACCAGAGAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS GCA 72 bp | AAACATTCCCTCTGTCAACTTCTAACACCATCAATTTaGTCCGCAAATTCTCTCTTCAGGGAAAGTTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: KHSLCQLLTPSI*SANSLFRESFC Trigger: GCAGAAACTTTCCCTGAAGAGAGAATTTGCGGAGCAAATTGATGGTGTTAGAAGTTGACAGAGGGAATGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS CAA 90 bp | TTACATAAGCAAATCCCGTTAAGACCCAAGATAGAAACCGAACCTTaGATGAGCAAACCACTCTCCAGTGTAGGTGTCATTATTGATGTA | + |
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Preference number: 6 (lower is better) Translates to: LHKQIPLRPKIETEP*MSKPLSSVGVIIDV Trigger: TACATCAATAATGACACCTACACTGGAGAGTGGTTTGCTCATCAAAGGTTCGGTTTCTATCTTGGGTCTTAACGGGATTTGCTTATGTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS TCA 72 bp | TTGCAGGAAATAGATATTTGGTATCTGATTTACCCATaGGAAGGAATACACACAAGAGGTTCAGATGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: LQEIDIWYLIYP*EGIHTRGSDAL Trigger: GAGGGCATCTGAACCTCTTGTGTGTATTCCTTCTCATGGGTAAATCAGATACCAAATATCTATTTCCTGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS TCA 72 bp | GGCCCGATTTTTCAGACTGGTTTAGGCTGGACAAGCTaGTTGATTCTTCCAGATTCATTTTCATCAAATTCT | + |
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Preference number: 6 (lower is better) Translates to: GPIFQTGLGWTS*LILPDSFSSNS Trigger: AGAATTTGATGAAAATGAATCTGGAAGAATCAATCAGCTTGTCCAGCCTAAACCAGTCTGAAAAATCGGGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS CCA 72 bp | GTCATTTGCCCACTCTCCTTCATATCTGGATCCATCTaGATATATAAAAGTGCCTTGACCGTGCTTTTTATT | + |
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Preference number: 6 (lower is better) Translates to: VICPLSFISGSI*IYKSALTVLFI Trigger: AATAAAAAGCACGGTCAAGGCACTTTTATATATCCAGATGGATCCAGATATGAAGGAGAGTGGGCAAATGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000291536.8 ENST00000398352.3 ENST00000493019.1 |
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| CDS CAA 90 bp | CCACTCTCCTTCATATCTGGATCCATCTGGATATATAAAAGTGCCTaGACCGTGCTTTTTATTTCTAACATATTCTCCGATATATCGAGC | + |
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Preference number: 6 (lower is better) Translates to: PLSFISGSIWIYKSA*TVLFISNIFSDISS Trigger: GCTCGATATATCGGAGAATATGTTAGAAATAAAAAGCACGGTCAAGGCACTTTTATATATCCAGATGGATCCAGATATGAAGGAGAGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000291536.8 ENST00000398352.3 ENST00000493019.1 |
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| CDS CCA 72 bp | CTGTGGTTAGGGCATGAATTATACGTAAATGAAAACTaGGTTCTAAGAGAGTCTGAAGAGACTTCGTTGTAT | + |
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Preference number: 6 (lower is better) Translates to: LWLGHELYVNEN*VLRESEETSLY Trigger: ATACAACGAAGTCTCTTCAGACTCTCTTAGAACCCAGTTTTCATTTACGTATAATTCATGCCCTAACCACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS CCA 72 bp | GTTATTTTGTACTTCATTGGCAAATGTCACTTCCCATaGACTTACATTTTTGTTCAAGAACTTGCCCTGGTA | + |
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Preference number: 6 (lower is better) Translates to: VILYFIGKCHFP*TYIFVQELALV Trigger: TACCAGGGCAAGTTCTTGAACAAAAATGTAAGTCCATGGGAAGTGACATTTGCCAATGAAGTACAAAATAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS CAA 72 bp | CAAACACCTCTATGCTCAATTGCAGGAAATAGATATTaGGTATCTGATTTACCCATGAGAAGGAATACACAC | + |
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Preference number: 6 (lower is better) Translates to: QTPLCSIAGNRY*VSDLPMRRNTH Trigger: GTGTGTATTCCTTCTCATGGGTAAATCAGATACCAAATATCTATTTCCTGCAATTGAGCATAGAGGTGTTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493019.1 |
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| CDS TCA 72 bp | TCATATCTGGATCCATCTGGATATATAAAAGTGCCTTaGCCGTGCTTTTTATTTCTAACATATTCTCCGATA | + |
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Preference number: 6 (lower is better) Translates to: SYLDPSGYIKVP*PCFLFLTYSPI Trigger: TATCGGAGAATATGTTAGAAATAAAAAGCACGGTCAAGGCACTTTTATATATCCAGATGGATCCAGATATGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000291536.8 ENST00000398352.3 ENST00000493019.1 |
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| CDS CAA 72 bp | TTCATATCTGGATCCATCTGGATATATAAAAGTGCCTaGACCGTGCTTTTTATTTCTAACATATTCTCCGAT | + |
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Preference number: 6 (lower is better) Translates to: FISGSIWIYKSA*TVLFISNIFSD Trigger: ATCGGAGAATATGTTAGAAATAAAAAGCACGGTCAAGGCACTTTTATATATCCAGATGGATCCAGATATGAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000291536.8 ENST00000398352.3 ENST00000493019.1 |
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