Pregenerated sensors for RRM2 (Homo sapiens)
Ensembl gene IDs: ENSG00000171848Ensembl transcript IDs: ENST00000304567.10, ENST00000360566.6, ENST00000381786.7, ENST00000459969.5, ENST00000462343.1, ENST00000487591.5, ENST00000498343.5, ENST00000607140.1, ENST00000615152.5, ENST00000641198.1, ENST00000641498.1, ENST00000642996.1, ENST00000646978.1
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACCTCGCTAGGGGCACAGTGGAGCCAGGTAACCCTGACTCAGCGCTaGTTCCCAGGGAGGGGACGCAGCTCTGGGCGAACTCTTTGCCAC | + |
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Preference number: 1 (lower is better) Translates to: TSLGAQWSQVTLTQR*FPGRGRSSGRTLCH Trigger: GTGGCAAAGAGTTCGCCCAGAGCTGCGTCCCCTCCCTGGGAAGCAGCGCTGAGTCAGGGTTACCTGGCTCCACTGTGCCCCTAGCGAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR TCA 90 bp | GTGTGGGCTGGCGGGCTCTGGAGTCAGACATCCCGCTCTGGAAGATaGCCTGAGTGGCTCTGCCTGCGGTGCACAAGCTCCTTGGGCTGT | + |
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Preference number: 1 (lower is better) Translates to: VWAGGLWSQTSRSGR*PEWLCLRCTSSLGC Trigger: ACAGCCCAAGGAGCTTGTGCACCGCAGGCAGAGCCACTCAGGTCATCTTCCAGAGCGGGATGTCTGACTCCAGAGCCCGCCAGCCCACAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR CCA 90 bp | CCCAGGGAGGGGACGCAGCTCTGGGCGAACTCTTTGCCACTGTTCTaGAGGAAATCCAGCTGGAGAGCACTGGAAGTGGAGGGCCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: PREGTQLWANSLPLF*RKSSWRALEVEGQC Trigger: ACACTGGCCCTCCACTTCCAGTGCTCTCCAGCTGGATTTCCTCCAGAACAGTGGCAAAGAGTTCGCCCAGAGCTGCGTCCCCTCCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR CCA 90 bp | CAGCTCTGGGCGAACTCTTTGCCACTGTTCTGGAGGAAATCCAGCTaGAGAGCACTGGAAGTGGAGGGCCAGTGTCTCCCAGGTCAGGCC | + |
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Preference number: 1 (lower is better) Translates to: QLWANSLPLFWRKSS*RALEVEGQCLPGQA Trigger: GGCCTGACCTGGGAGACACTGGCCCTCCACTTCCAGTGCTCTCCAGCTGGATTTCCTCCAGAACAGTGGCAAAGAGTTCGCCCAGAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR CCA 90 bp | AGAGCCCATGTCATTGTGCGAACTTTCACCTCGCTAGGGGCACAGTaGAGCCAGGTAACCCTGACTCAGCGCTGCTTCCCAGGGAGGGGA | + |
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Preference number: 1 (lower is better) Translates to: RAHVIVRTFTSLGAQ*SQVTLTQRCFPGRG Trigger: TCCCCTCCCTGGGAAGCAGCGCTGAGTCAGGGTTACCTGGCTCCACTGTGCCCCTAGCGAGGTGAAAGTTCGCACAATGACATGGGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR GCA 90 bp | GGAGTCAGACATCCCGCTCTGGAAGATGACCTGAGTGGCTCTGCCTaGGGTGCACAAGCTCCTTGGGCTGTAGCCTCCTTATCCTCAACA | + |
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Preference number: 1 (lower is better) Translates to: GVRHPALEDDLSGSA*GAQAPWAVASLSST Trigger: TGTTGAGGATAAGGAGGCTACAGCCCAAGGAGCTTGTGCACCGCAGGCAGAGCCACTCAGGTCATCTTCCAGAGCGGGATGTCTGACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR CCA 90 bp | CTGGAAGATGACCTGAGTGGCTCTGCCTGCGGTGCACAAGCTCCTTaGGCTGTAGCCTCCTTATCCTCAACAGAGAGCCCATGTCATTGT | + |
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Preference number: 1 (lower is better) Translates to: LEDDLSGSACGAQAP*AVASLSSTESPCHC Trigger: ACAATGACATGGGCTCTCTGTTGAGGATAAGGAGGCTACAGCCCAAGGAGCTTGTGCACCGCAGGCAGAGCCACTCAGGTCATCTTCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR TCA 90 bp | GCCCTCCAACCAGAAACATTCCTACCCCGAAATCAAACACTCCTCTaGCCAGAAACATTCCCAACCTGCGATAAGCTCTCCCTCCCTAAA | + |
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Preference number: 1 (lower is better) Translates to: ALQPETFLPRNQTLL*PETFPTCDKLSLPK Trigger: TTTAGGGAGGGAGAGCTTATCGCAGGTTGGGAATGTTTCTGGTCAGAGGAGTGTTTGATTTCGGGGTAGGAATGTTTCTGGTTGGAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| 3UTR TCA 90 bp | GTTTTTAGCTCATCAGCTATCGTTAGTGTTAGTGTATTTTATGTGTaGCACAAGCCAATTCTCCTTCCAATGTGGCCAAGGGAAGCCAAA | + |
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Preference number: 1 (lower is better) Translates to: VFSSSAIVSVSVFYV*HKPILLPMWPREAK Trigger: TTTGGCTTCCCTTGGCCACATTGGAAGGAGAATTGGCTTGTGTCACACATAAAATACACTAACACTAACGATAGCTGATGAGCTAAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR-3UTR TCA 90 bp | CTGCGGTGCACAAGCTCCTTGGGCTGTAGCCTCCTTATCCTCAACAGAGAGCCCGGAGGCATTCTGGACTaGAAGCTGCAACTGCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: LRCTSSLGCSLLILNREPGGILD*KLQLPP Trigger: GGGAGGCAGTTGCAGCTTTCAGTCCAGAATGCCTCC...GGGCTCTCTGTTGAGGATAAGGAGGCTACAGCCCAAGGAGCTTGTGCACCGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR-3UTR CCA 90 bp | CTCTGCCTGCGGTGCACAAGCTCCTTGGGCTGTAGCCTCCTTATCCTCAACAGAGGAGAGCACTGGAAGTaGAGGGCCAGTGTCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: LCLRCTSSLGCSLLILNRGEHWK*RASVSQ Trigger: CTGGGAGACACTGGCCCTCCACTTCCAGTGCTCTCC...TCTGTTGAGGATAAGGAGGCTACAGCCCAAGGAGCTTGTGCACCGCAGGCAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR-3UTR CCA 90 bp | AGACTCAGGCAGACTCAGGCCAGAGAAACCCAGTCCTCAGGAGAGCAGTGTGGGTCGCTAGGGGCACAGTaGAGCCAGGTAACCCTGACT | + |
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Preference number: 2 (lower is better) Translates to: RLRQTQARETQSSGEQCGSLGAQ*SQVTLT Trigger: AGTCAGGGTTACCTGGCTCCACTGTGCCCCTAGCGA...CCCACACTGCTCTCCTGAGGACTGGGTTTCTCTGGCCTGAGTCTGCCTGAGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR-3UTR CCA 90 bp | CAGGGTTCTTCCTGTAGACTCAGGCAGACTCAGGCCAGAGAAACCCAGTCCTCATGGGCTGGCGGGCTCTaGAGTCAGACATCCCGCTCT | + |
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Preference number: 2 (lower is better) Translates to: QGSSCRLRQTQARETQSSWAGGL*SQTSRS Trigger: AGAGCGGGATGTCTGACTCCAGAGCCCGCCAGCCCA...TGAGGACTGGGTTTCTCTGGCCTGAGTCTGCCTGAGTCTACAGGAAGAACCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR-3UTR GCA 90 bp | CAGGGTTCTTCCTGTAGACTCAGGCAGACTCAGGCCAGAGAAACCCAGTCCTCACTGAGTGGCTCTGCCTaGGGTGCACAAGCTCCTTGG | + |
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Preference number: 2 (lower is better) Translates to: QGSSCRLRQTQARETQSSLSGSA*GAQAPW Trigger: CCAAGGAGCTTGTGCACCGCAGGCAGAGCCACTCAG...TGAGGACTGGGTTTCTCTGGCCTGAGTCTGCCTGAGTCTACAGGAAGAACCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR-3UTR CCA 90 bp | CAGGGTTCTTCCTGTAGACTCAGGCAGACTCAGGCCAGAGAAACCCAGTCCTCAGAGGGGACGCAGCTCTaGGCGAACTCTTTGCCACTG | + |
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Preference number: 2 (lower is better) Translates to: QGSSCRLRQTQARETQSSEGTQL*ANSLPL Trigger: CAGTGGCAAAGAGTTCGCCCAGAGCTGCGTCCCCTC...TGAGGACTGGGTTTCTCTGGCCTGAGTCTGCCTGAGTCTACAGGAAGAACCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR-3UTR GCA 90 bp | GGCTGTAGCCTCCTTATCCTCAACAGAGAGCCCATGTCATTGTGCGAACTTTCAACCCTGACTCAGCGCTaGTTCCCAGGGAGGGGACGC | + |
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Preference number: 2 (lower is better) Translates to: GCSLLILNREPMSLCELSTLTQR*FPGRGR Trigger: GCGTCCCCTCCCTGGGAAGCAGCGCTGAGTCAGGGT...TGAAAGTTCGCACAATGACATGGGCTCTCTGTTGAGGATAAGGAGGCTACAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR-3UTR TCA 90 bp | GAGCTGAAAATTAGATGTTTCAGTGGGCGCTGCCTCTGGGCCTCTGAGGCAGAGAAGAGAGAGTGCTCCTaGCAGCAATCGGCCAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: ELKIRCFSGRCLWASEAEKRECS*QQSARS Trigger: GCTTCTGGCCGATTGCTGTCAGGAGCACTCTCTCTT...CTCTGCCTCAGAGGCCCAGAGGCAGCGCCCACTGAAACATCTAATTTTCAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| 3UTR-3UTR GCA 90 bp | TGTGAGCTGAAAATTAGATGTTTCAGTGGGCGCTGCCTCTGGGCCTCTGAGGCACCCATCTCTGAAAGCTaGAACTGCCTCCCGCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: CELKIRCFSGRCLWASEAPISES*NCLPLP Trigger: TGGAAGCGGGAGGCAGTTGCAGCTTTCAGAGATGGG...TGCCTCAGAGGCCCAGAGGCAGCGCCCACTGAAACATCTAATTTTCAGCTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| 3UTR-3UTR GCA 90 bp | CAGGGTTCTTCCTGTAGACTCAGGCAGACTCAGGCCAGAGAAACCCAGTCCTCATTCTGGACTGAAAGCTaGAACTGCCTCCCGCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: QGSSCRLRQTQARETQSSFWTES*NCLPLP Trigger: TGGAAGCGGGAGGCAGTTGCAGCTTTCAGTCCAGAA...TGAGGACTGGGTTTCTCTGGCCTGAGTCTGCCTGAGTCTACAGGAAGAACCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR-3UTR CCA 90 bp | GGCTGTAGCCTCCTTATCCTCAACAGAGAGCCCATGTCATTGTGCGAACTTTCACCAGCTGGAGAGCACTaGAAGTGGAGGGCCAGTGTC | + |
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Preference number: 2 (lower is better) Translates to: GCSLLILNREPMSLCELSPAGEH*KWRASV Trigger: GACACTGGCCCTCCACTTCCAGTGCTCTCCAGCTGG...TGAAAGTTCGCACAATGACATGGGCTCTCTGTTGAGGATAAGGAGGCTACAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR-3UTR CCA 90 bp | CAGGGTTCTTCCTGTAGACTCAGGCAGACTCAGGCCAGAGAAACCCAGTCCTCATCTTTGCCACTGTTCTaGAGGAAATCCAGCTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: QGSSCRLRQTQARETQSSSLPLF*RKSSWR Trigger: TCTCCAGCTGGATTTCCTCCAGAACAGTGGCAAAGA...TGAGGACTGGGTTTCTCTGGCCTGAGTCTGCCTGAGTCTACAGGAAGAACCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR-3UTR TCA 90 bp | AGTAGCCAGAAAGAGCACGTCGCCCCTCATCCTTTTATAACTATAGGGTCTGGAGCAAAACCCCATCTCTaGAAGCTGCAACTGCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: SSQKEHVAPHPFITIGSGAKPHL*KLQLPP Trigger: GGGAGGCAGTTGCAGCTTTCAGAGATGGGGTTTTGC...TCCAGACCCTATAGTTATAAAAGGATGAGGGGCGACGTGCTCTTTCTGGCTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| 3UTR-3UTR TCA 90 bp | CAGGGTTCTTCCTGTAGACTCAGGCAGACTCAGGCCAGAGAAACCCAGTCCTCACTGCTGATGATCAAATaGAGATCAGAGGCGTTTAGG | + |
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Preference number: 2 (lower is better) Translates to: QGSSCRLRQTQARETQSSLLMIK*RSEAFR Trigger: CCTAAACGCCTCTGATCTTCATTTGATCATCAGCAG...TGAGGACTGGGTTTCTCTGGCCTGAGTCTGCCTGAGTCTACAGGAAGAACCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR-3UTR CCA 90 bp | CAGCTATCGTTAGTGTTAGTGTATTTTATGTGTGACACAAGCCAATTCTCCTTCCTCAGGAGAGCAGTGTaGGCTGGCGGGCTCTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: QLSLVLVYFMCDTSQFSFLRRAV*AGGLWS Trigger: ACTCCAGAGCCCGCCAGCCCACACTGCTCTCCTGAG...GAAGGAGAATTGGCTTGTGTCACACATAAAATACACTAACACTAACGATAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR-3UTR GCA 90 bp | CAGCTATCGTTAGTGTTAGTGTATTTTATGTGTGACACAAGCCAATTCTCCTTCAGGGGCTTACTGGGGTaGCAGCAGGGTTCTTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: QLSLVLVYFMCDTSQFSFRGLLG*QQGSSC Trigger: ACAGGAAGAACCCTGCTGGCACCCCAGTAAGCCCCT...GAAGGAGAATTGGCTTGTGTCACACATAAAATACACTAACACTAACGATAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR-3UTR TCA 90 bp | CTAAGCTGTGCTTTCTTGAAGCCCTGTGAGCTGAAAATTAGATGTTTCAGTGGGCCTGTCTTGGACTGTTaGGCCACTTTTCGTGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: LSCAFLKPCELKIRCFSGPVLDC*ATFRVS Trigger: AGAAACACGAAAAGTGGCTCAACAGTCCAAGACAGG...CCCACTGAAACATCTAATTTTCAGCTCACAGGGCTTCAAGAAAGCACAGCTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| 3UTR-3UTR TCA 90 bp | CTAAGCTGTGCTTTCTTGAAGCCCTGTGAGCTGAAAATTAGATGTTTCAGTGGGAATCAAACACTCCTCTaGCCAGAAACATTCCCAACC | + |
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Preference number: 2 (lower is better) Translates to: LSCAFLKPCELKIRCFSGNQTLL*PETFPT Trigger: GGTTGGGAATGTTTCTGGTCAGAGGAGTGTTTGATT...CCCACTGAAACATCTAATTTTCAGCTCACAGGGCTTCAAGAAAGCACAGCTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| 3UTR-3UTR CCA 90 bp | AACCTAAGCTGTGCTTTCTTGAAGCCCTGTGAGCTGAAAATTAGATGTTTCAGTAGTTCAAGACCAGCCTaGCCAACATGCAAAACCCCA | + |
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Preference number: 2 (lower is better) Translates to: NLSCAFLKPCELKIRCFSSSRPA*PTCKTP Trigger: TGGGGTTTTGCATGTTGGCCAGGCTGGTCTTGAACT...ACTGAAACATCTAATTTTCAGCTCACAGGGCTTCAAGAAAGCACAGCTTAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| 3UTR CAA 90 bp | AATCACTTAAGACTTGTGCATTATTCAATTTTGAGACTGAAATACTaGTTTCCCTTTCAACTGATTAGGAAATGGTCTGAGCTGGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: NHLRLVHYSILRLKY*FPFQLIRKWSELAE Trigger: TTCTGCCAGCTCAGACCATTTCCTAATCAGTTGAAAGGGAAACAAGTATTTCAGTCTCAAAATTGAATAATGCACAAGTCTTAAGTGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000304567.10 ENST00000360566.6 ENST00000615152.5 ENST00000641198.1 |
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| 3UTR TCA 72 bp | GGCGGGCTCTGGAGTCAGACATCCCGCTCTGGAAGATaGCCTGAGTGGCTCTGCCTGCGGTGCACAAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: GGLWSQTSRSGR*PEWLCLRCTSS Trigger: GGAGCTTGTGCACCGCAGGCAGAGCCACTCAGGTCATCTTCCAGAGCGGGATGTCTGACTCCAGAGCCCGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR GCA 72 bp | CGTTTAGGCAGAAAGGAGGCATTCTGGACTGAAAGCTaGAACTGCCTCCCGCTTCCACTGGCGCACCCCGAG | + |
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Preference number: 3 (lower is better) Translates to: RLGRKEAFWTES*NCLPLPLAHPE Trigger: CTCGGGGTGCGCCAGTGGAAGCGGGAGGCAGTTGCAGCTTTCAGTCCAGAATGCCTCCTTTCTGCCTAAACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR GCA 72 bp | TTCCCAGGGAGGGGACGCAGCTCTGGGCGAACTCTTTaGCACTGTTCTGGAGGAAATCCAGCTGGAGAGCAC | + |
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Preference number: 3 (lower is better) Translates to: FPGRGRSSGRTL*HCSGGNPAGEH Trigger: GTGCTCTCCAGCTGGATTTCCTCCAGAACAGTGGCAAAGAGTTCGCCCAGAGCTGCGTCCCCTCCCTGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR-3UTR CAA 90 bp | GACTCAGGCAGACTCAGGCCAGAGAAACCCAGTCCTCAGGAGAGCAGTGTGGGCAGAGAGCCCATGTCATaGTGCGAACTTTCACCTCGC | + |
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Preference number: 3 (lower is better) Translates to: DSGRLRPEKPSPQESSVGREPMS*CELSPR Trigger: GCGAGGTGAAAGTTCGCACAATGACATGGGCTCTCT...GCCCACACTGCTCTCCTGAGGACTGGGTTTCTCTGGCCTGAGTCTGCCTGAGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR CCA 72 bp | GTCATTGTGCGAACTTTCACCTCGCTAGGGGCACAGTaGAGCCAGGTAACCCTGACTCAGCGCTGCTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: VIVRTFTSLGAQ*SQVTLTQRCFP Trigger: TGGGAAGCAGCGCTGAGTCAGGGTTACCTGGCTCCACTGTGCCCCTAGCGAGGTGAAAGTTCGCACAATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR-3UTR CAA 90 bp | CTGCGGTGCACAAGCTCCTTGGGCTGTAGCCTCCTTATCCTCAACAGAGAGCCCCTCTGGGCGAACTCTTaGCCACTGTTCTGGAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: LRCTSSLGCSLLILNREPLWANS*PLFWRK Trigger: TTTCCTCCAGAACAGTGGCAAAGAGTTCGCCCAGAG...GGGCTCTCTGTTGAGGATAAGGAGGCTACAGCCCAAGGAGCTTGTGCACCGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR GCA 72 bp | CCCTGTGAGCTGAAAATTAGATGTTTCAGTGGGCGCTaGCTCTGGGCCTCTGAGGCAGAGTGTGCTACCCAG | + |
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Preference number: 3 (lower is better) Translates to: PCELKIRCFSGR*LWASEAECATQ Trigger: CTGGGTAGCACACTCTGCCTCAGAGGCCCAGAGGCAGCGCCCACTGAAACATCTAATTTTCAGCTCACAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| 3UTR CCA 72 bp | GCGAACTCTTTGCCACTGTTCTGGAGGAAATCCAGCTaGAGAGCACTGGAAGTGGAGGGCCAGTGTCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: ANSLPLFWRKSS*RALEVEGQCLP Trigger: TGGGAGACACTGGCCCTCCACTTCCAGTGCTCTCCAGCTGGATTTCCTCCAGAACAGTGGCAAAGAGTTCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR CCA 72 bp | AGAGCAGTTAGAGCTCCAAGGTCTAGAGGGGCTTACTaGGGTGCCAGCAGGGTTCTTCCTGTAGACTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: RAVRAPRSRGAY*GASRVLPVDSG Trigger: GCCTGAGTCTACAGGAAGAACCCTGCTGGCACCCCAGTAAGCCCCTCTAGACCTTGGAGCTCTAACTGCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR CCA 72 bp | GAGCTGAAAATTAGATGTTTCAGTGGGCGCTGCCTCTaGGCCTCTGAGGCAGAGTGTGCTACCCAGAACAAA | + |
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Preference number: 3 (lower is better) Translates to: ELKIRCFSGRCL*ASEAECATQNK Trigger: TTTGTTCTGGGTAGCACACTCTGCCTCAGAGGCCCAGAGGCAGCGCCCACTGAAACATCTAATTTTCAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| 3UTR TCA 72 bp | CAGTGGCTCATGGGTCTGCAGCTGCTGATGATCAAATaGAGATCAGAGGCGTTTAGGCAGAAAGGAGGCATT | + |
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Preference number: 3 (lower is better) Translates to: QWLMGLQLLMIK*RSEAFRQKGGI Trigger: AATGCCTCCTTTCTGCCTAAACGCCTCTGATCTTCATTTGATCATCAGCAGCTGCAGACCCATGAGCCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR TCA 72 bp | GATTGGACACCCCTGCCTTACAGGCTAACTGAAAAGTaGGCTCTGAGAGCAGTTAGAGCTCCAAGGTCTAGA | + |
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Preference number: 3 (lower is better) Translates to: DWTPLPYRLTEK*ALRAVRAPRSR Trigger: TCTAGACCTTGGAGCTCTAACTGCTCTCAGAGCTCACTTTTCAGTTAGCCTGTAAGGCAGGGGTGTCCAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR-3UTR CAA 90 bp | CTAAGCTGTGCTTTCTTGAAGCCCTGTGAGCTGAAAATTAGATGTTTCAGTGGGACTATAGGGTCTGGATaGACAAAGCAGGAGCATCAA | + |
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Preference number: 3 (lower is better) Translates to: LSCAFLKPCELKIRCFSGTIGSG*TKQEHQ Trigger: TTGATGCTCCTGCTTTGTCAATCCAGACCCTATAGT...CCCACTGAAACATCTAATTTTCAGCTCACAGGGCTTCAAGAAAGCACAGCTTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| 3UTR TCA 72 bp | CATTATTCAGCTAATGAGAGACAGAATCCTAAAACCTaGTTCCAACTTCCGCCTGTACCTCACAATGCAAGA | + |
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Preference number: 3 (lower is better) Translates to: HYSANERQNPKT*FQLPPVPHNAR Trigger: TCTTGCATTGTGAGGTACAGGCGGAAGTTGGAATCAGGTTTTAGGATTCTGTCTCTCATTAGCTGAATAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000304567.10 ENST00000360566.6 ENST00000615152.5 ENST00000641198.1 |
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| 3UTR TCA 72 bp | TCATCAGCTATCGTTAGTGTTAGTGTATTTTATGTGTaGCACAAGCCAATTCTCCTTCCAATGTGGCCAAGG | + |
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Preference number: 3 (lower is better) Translates to: SSAIVSVSVFYV*HKPILLPMWPR Trigger: CCTTGGCCACATTGGAAGGAGAATTGGCTTGTGTCACACATAAAATACACTAACACTAACGATAGCTGATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR TCA 72 bp | AGGTTTATTCTCCAAAATAAACCTGTCTTGGACTGTTaGGCCACTTTTCGTGTTTCTTTCTTCTTTCTTCAA | + |
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Preference number: 3 (lower is better) Translates to: RFILQNKPVLDC*ATFRVSFFFLQ Trigger: TTGAAGAAAGAAGAAAGAAACACGAAAAGTGGCTCAACAGTCCAAGACAGGTTTATTTTGGAGAATAAACCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| CDS-3UTR TCA 90 bp | TTCACCTCGCTAGGGGCACAGTGGAGCCAGGTAACCCTGACTCAGCGCTGCTTCTCCCGCTCTGGAAGATaGCCTGAGTGGCTCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: FTSLGAQWSQVTLTQRCFSRSGR*PEWLCL Trigger: CAGGCAGAGCCACTCAGGTCATCTTCCAGAGCGGGA...GAAGCAGCGCTGAGTCAGGGTTACCTGGCTCCACTGTGCCCCTAGCGAGGTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR GCA 90 bp | TCCCAGGGAGGGGACGCAGCTCTGGGCGAACTCTTTGCCACTGTTCTGGAGGAATGGCTCTGCCTGCGGTaGACAAGCTCCTTGGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: SQGGDAALGELFATVLEEWLCLR*TSSLGC Trigger: ACAGCCCAAGGAGCTTGTGCACCGCAGGCAGAGCCA...TTCCTCCAGAACAGTGGCAAAGAGTTCGCCCAGAGCTGCGTCCCCTCCCTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR GCA 90 bp | TCCCAGGGAGGGGACGCAGCTCTGGGCGAACTCTTTGCCACTGTTCTGGAGGAACTGAGTGGCTCTGCCTaGGGTGCACAAGCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SQGGDAALGELFATVLEELSGSA*GAQAPW Trigger: CCAAGGAGCTTGTGCACCGCAGGCAGAGCCACTCAG...TTCCTCCAGAACAGTGGCAAAGAGTTCGCCCAGAGCTGCGTCCCCTCCCTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR CCA 90 bp | ACTCAGGCAGACTCAGGCCAGAGAAACCCAGTCCTCAGGAGAGCAGTGTGGGCTCTCAGGAGAGCAGTGTaGGCTGGCGGGCTCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TQADSGQRNPVLRRAVWALRRAV*AGGLWS Trigger: ACTCCAGAGCCCGCCAGCCCACACTGCTCTCCTGAG...AGCCCACACTGCTCTCCTGAGGACTGGGTTTCTCTGGCCTGAGTCTGCCTGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR TCA 90 bp | AGACTCAGGCAGACTCAGGCCAGAGAAACCCAGTCCTCAGGAGAGCAGTGTGGGCGCACACTGGGTGGGTaGTTGGTCTCCATCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RLRQTQARETQSSGEQCGRTLGG*LVSISL Trigger: GAGGGAGATGGAGACCAATCACCCACCCAGTGTGCG...CCCACACTGCTCTCCTGAGGACTGGGTTTCTCTGGCCTGAGTCTGCCTGAGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR TCA 90 bp | AGACTCAGGCAGACTCAGGCCAGAGAAACCCAGTCCTCAGGAGAGCAGTGTGGGCTCTGGAAGATGACCTaGGTGGCTCTGCCTGCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: RLRQTQARETQSSGEQCGLWKMT*VALPAV Trigger: CACCGCAGGCAGAGCCACTCAGGTCATCTTCCAGAG...CCCACACTGCTCTCCTGAGGACTGGGTTTCTCTGGCCTGAGTCTGCCTGAGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR GCA 90 bp | TCCCAGGGAGGGGACGCAGCTCTGGGCGAACTCTTTGCCACTGTTCTGGAGGAAAGGGGCTTACTGGGGTaGCAGCAGGGTTCTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SQGGDAALGELFATVLEERGLLG*QQGSSC Trigger: ACAGGAAGAACCCTGCTGGCACCCCAGTAAGCCCCT...TTCCTCCAGAACAGTGGCAAAGAGTTCGCCCAGAGCTGCGTCCCCTCCCTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| 3UTR CAA 72 bp | CTTCCCAGGGAGGGGACGCAGCTCTGGGCGAACTCTTaGCCACTGTTCTGGAGGAAATCCAGCTGGAGAGCA | + |
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Preference number: 4 (lower is better) Translates to: LPREGTQLWANS*PLFWRKSSWRA Trigger: TGCTCTCCAGCTGGATTTCCTCCAGAACAGTGGCAAAGAGTTCGCCCAGAGCTGCGTCCCCTCCCTGGGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR TCA 90 bp | TCTGGAGTCAGACATCCCGCTCTGGAAGATGACCTGAGTGGCTCTGCCTGCGGTGGAGGCATTCTGGACTaGAAGCTGCAACTGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SGVRHPALEDDLSGSACGGGILD*KLQLPP Trigger: GGGAGGCAGTTGCAGCTTTCAGTCCAGAATGCCTCC...ACCGCAGGCAGAGCCACTCAGGTCATCTTCCAGAGCGGGATGTCTGACTCCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR GCA 90 bp | CTCCTTCCAATGTGGCCAAGGGAAGCCAAAAGATTGGACACCCCTGCCTTACAGACCCTGACTCAGCGCTaGTTCCCAGGGAGGGGACGC | + |
|
Preference number: 4 (lower is better) Translates to: LLPMWPREAKRLDTPALQTLTQR*FPGRGR Trigger: GCGTCCCCTCCCTGGGAAGCAGCGCTGAGTCAGGGT...CTGTAAGGCAGGGGTGTCCAATCTTTTGGCTTCCCTTGGCCACATTGGAAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR CCA 90 bp | CTGCGGTGCACAAGCTCCTTGGGCTGTAGCCTCCTTATCCTCAACAGAGAGCCCTCGCTAGGGGCACAGTaGAGCCAGGTAACCCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LRCTSSLGCSLLILNREPSLGAQ*SQVTLT Trigger: AGTCAGGGTTACCTGGCTCCACTGTGCCCCTAGCGA...GGGCTCTCTGTTGAGGATAAGGAGGCTACAGCCCAAGGAGCTTGTGCACCGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR CCA 90 bp | GACTCAGGCAGACTCAGGCCAGAGAAACCCAGTCCTCAGGAGAGCAGTGTGGGCGGTGCACAAGCTCCTTaGGCTGTAGCCTCCTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: DSGRLRPEKPSPQESSVGGAQAP*AVASLS Trigger: GGATAAGGAGGCTACAGCCCAAGGAGCTTGTGCACC...GCCCACACTGCTCTCCTGAGGACTGGGTTTCTCTGGCCTGAGTCTGCCTGAGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR CCA 90 bp | CAGGGTTCTTCCTGTAGACTCAGGCAGACTCAGGCCAGAGAAACCCAGTCCTCAGGAGAGCACTGGAAGTaGAGGGCCAGTGTCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QGSSCRLRQTQARETQSSGEHWK*RASVSQ Trigger: CTGGGAGACACTGGCCCTCCACTTCCAGTGCTCTCC...TGAGGACTGGGTTTCTCTGGCCTGAGTCTGCCTGAGTCTACAGGAAGAACCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR CCA 90 bp | CTCCTTCCAATGTGGCCAAGGGAAGCCAAAAGATTGGACACCCCTGCCTTACAGTGGGCTGGCGGGCTCTaGAGTCAGACATCCCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLPMWPREAKRLDTPALQWAGGL*SQTSRS Trigger: AGAGCGGGATGTCTGACTCCAGAGCCCGCCAGCCCA...CTGTAAGGCAGGGGTGTCCAATCTTTTGGCTTCCCTTGGCCACATTGGAAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR CCA 90 bp | TCTGGAGTCAGACATCCCGCTCTGGAAGATGACCTGAGTGGCTCTGCCTGCGGTTCTAGAGGGGCTTACTaGGGTGCCAGCAGGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SGVRHPALEDDLSGSACGSRGAY*GASRVL Trigger: AAGAACCCTGCTGGCACCCCAGTAAGCCCCTCTAGA...ACCGCAGGCAGAGCCACTCAGGTCATCTTCCAGAGCGGGATGTCTGACTCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR TCA 90 bp | GACTCAGGCAGACTCAGGCCAGAGAAACCCAGTCCTCAGGAGAGCAGTGTGGGCGCCTTACAGGCTAACTaGAAAGTGAGCTCTGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DSGRLRPEKPSPQESSVGALQAN*KVSSES Trigger: GCTCTCAGAGCTCACTTTTCAGTTAGCCTGTAAGGC...GCCCACACTGCTCTCCTGAGGACTGGGTTTCTCTGGCCTGAGTCTGCCTGAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR GCA 90 bp | CCCGAAATCAAACACTCCTCTGACCAGAAACATTCCCAACCTGCGATAAGCTCTTCCTCCTCGCGGTCTTaGTGGCCAGGACGCGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PEIKHSSDQKHSQPAISSSSSRS*WPGRGS Trigger: GGACCCGCGTCCTGGCCAGCAAGACCGCGAGGAGGA...AGAGCTTATCGCAGGTTGGGAATGTTTCTGGTCAGAGGAGTGTTTGATTTCGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| CDS-3UTR GCA 90 bp | GCTTACTGGGGTGCCAGCAGGGTTCTTCCTGTAGACTCAGGCAGACTCAGGCCATTCTGGACTGAAAGCTaGAACTGCCTCCCGCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AYWGASRVLPVDSGRLRPFWTES*NCLPLP Trigger: TGGAAGCGGGAGGCAGTTGCAGCTTTCAGTCCAGAA...TGGCCTGAGTCTGCCTGAGTCTACAGGAAGAACCCTGCTGGCACCCCAGTAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR CCA 90 bp | ACCACAAATGACACCTCCAATCAGAAACATTCCAACCCTGAGATAAAGCGCCCTTCCTCGCGGTCTTGCTaGCCAGGACGCGGGTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TTNDTSNQKHSNPEIKRPSSRSC*PGRGSR Trigger: GCGGGACCCGCGTCCTGGCCAGCAAGACCGCGAGGA...AGGGCGCTTTATCTCAGGGTTGGAATGTTTCTGATTGGAGGTGTCATTTGTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| CDS-3UTR CCA 90 bp | GTGTGCTACCCAGAACAAATCGACCTCTTCCACTCCAGCACCATGTTCAGTGTCAGTGGGCGCTGCCTCTaGGCCTCTGAGGCAGAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VCYPEQIDLFHSSTMFSVSGRCL*ASEAEC Trigger: ACACTCTGCCTCAGAGGCCCAGAGGCAGCGCCCACT...GACACTGAACATGGTGCTGGAGTGGAAGAGGTCGATTTGTTCTGGGTAGCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| CDS-3UTR CCA 90 bp | CTCCTTCCAATGTGGCCAAGGGAAGCCAAAAGATTGGACACCCCTGCCTTACAGGAGGGGACGCAGCTCTaGGCGAACTCTTTGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LLPMWPREAKRLDTPALQEGTQL*ANSLPL Trigger: CAGTGGCAAAGAGTTCGCCCAGAGCTGCGTCCCCTC...CTGTAAGGCAGGGGTGTCCAATCTTTTGGCTTCCCTTGGCCACATTGGAAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR CCA 90 bp | CATTGTGCGAACTTTCACCTCGCTAGGGGCACAGTGGAGCCAGGTAACCCTGACTGGAGGAAATCCAGCTaGAGAGCACTGGAAGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HCANFHLARGTVEPGNPDWRKSS*RALEVE Trigger: CTCCACTTCCAGTGCTCTCCAGCTGGATTTCCTCCA...GTCAGGGTTACCTGGCTCCACTGTGCCCCTAGCGAGGTGAAAGTTCGCACAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR CCA 90 bp | TTCACCTCGCTAGGGGCACAGTGGAGCCAGGTAACCCTGACTCAGCGCTGCTTCTCTTTGCCACTGTTCTaGAGGAAATCCAGCTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTSLGAQWSQVTLTQRCFSLPLF*RKSSWR Trigger: TCTCCAGCTGGATTTCCTCCAGAACAGTGGCAAAGA...GAAGCAGCGCTGAGTCAGGGTTACCTGGCTCCACTGTGCCCCTAGCGAGGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR TCA 90 bp | TCCCAGGGAGGGGACGCAGCTCTGGGCGAACTCTTTGCCACTGTTCTGGAGGAAAGGCTAACTGAAAAGTaGGCTCTGAGAGCAGTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQGGDAALGELFATVLEERLTEK*ALRAVR Trigger: TCTAACTGCTCTCAGAGCTCACTTTTCAGTTAGCCT...TTCCTCCAGAACAGTGGCAAAGAGTTCGCCCAGAGCTGCGTCCCCTCCCTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR CCA 90 bp | TGTGAGCTGAAAATTAGATGTTTCAGTGGGCGCTGCCTCTGGGCCTCTGAGGCACACTGGGTGGGTGATTaGTCTCCATCTCCCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: CELKIRCFSGRCLWASEAHWVGD*SPSPSL Trigger: CAGTGAGGGAGATGGAGACCAATCACCCACCCAGTG...TGCCTCAGAGGCCCAGAGGCAGCGCCCACTGAAACATCTAATTTTCAGCTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| CDS-3UTR TCA 90 bp | CTGACAGCAATCGGCCAGAAGCCCCTCTCAGGTTTATTCTCCAAAATAAACCTGCGCACACTGGGTGGGTaGTTGGTCTCCATCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LTAIGQKPLSGLFSKINLRTLGG*LVSISL Trigger: GAGGGAGATGGAGACCAATCACCCACCCAGTGTGCG...CAGGTTTATTTTGGAGAATAAACCTGAGAGGGGCTTCTGGCCGATTGCTGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| CDS-3UTR TCA 90 bp | CCAGGGAGGGGACGCAGCTCTGGGCGAACTCTTTGCCACTGTTCTGGAGGAAATCTGCTGATGATCAAATaGAGATCAGAGGCGTTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGRGRSSGRTLCHCSGGNLLMIK*RSEAFR Trigger: CCTAAACGCCTCTGATCTTCATTTGATCATCAGCAG...ATTTCCTCCAGAACAGTGGCAAAGAGTTCGCCCAGAGCTGCGTCCCCTCCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR CCA 90 bp | AGCCTCCTTATCCTCAACAGAGAGCCCATGTCATTGTGCGAACTTTCACCTCGCCACTGGGTGGGTGATTaGTCTCCATCTCCCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SLLILNREPMSLCELSPRHWVGD*SPSPSL Trigger: CAGTGAGGGAGATGGAGACCAATCACCCACCCAGTG...GCGAGGTGAAAGTTCGCACAATGACATGGGCTCTCTGTTGAGGATAAGGAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR CCA 90 bp | GAGCTGAAAATTAGATGTTTCAGTGGGCGCTGCCTCTGGGCCTCTGAGGCAGAGAGTTCAAGACCAGCCTaGCCAACATGCAAAACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ELKIRCFSGRCLWASEAESSRPA*PTCKTP Trigger: TGGGGTTTTGCATGTTGGCCAGGCTGGTCTTGAACT...CTCTGCCTCAGAGGCCCAGAGGCAGCGCCCACTGAAACATCTAATTTTCAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| CDS-3UTR CCA 90 bp | TCAAATGAAGATCAGAGGCGTTTAGGCAGAAAGGAGGCATTCTGGACTGAAAGCGAGAGCAGTGTGGGCTaGCGGGCTCTGGAGTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SNEDQRRLGRKEAFWTESESSVG*RALESD Trigger: GTCTGACTCCAGAGCCCGCCAGCCCACACTGCTCTC...GCTTTCAGTCCAGAATGCCTCCTTTCTGCCTAAACGCCTCTGATCTTCATTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR TCA 90 bp | GAGCTGAAAATTAGATGTTTCAGTGGGCGCTGCCTCTGGGCCTCTGAGGCAGAGCCTGTCTTGGACTGTTaGGCCACTTTTCGTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ELKIRCFSGRCLWASEAEPVLDC*ATFRVS Trigger: AGAAACACGAAAAGTGGCTCAACAGTCCAAGACAGG...CTCTGCCTCAGAGGCCCAGAGGCAGCGCCCACTGAAACATCTAATTTTCAGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| CDS-3UTR TCA 90 bp | CAGAAACATTCCTACCCCGAAATCAAACACTCCTCTGACCAGAAACATTCCCAACTGCCTCTGGGCCTCTaGGGCAGAGTGTGCTACCCA | + |
|
Preference number: 4 (lower is better) Translates to: QKHSYPEIKHSSDQKHSQLPLGL*GRVCYP Trigger: TGGGTAGCACACTCTGCCTCAGAGGCCCAGAGGCAG...TTGGGAATGTTTCTGGTCAGAGGAGTGTTTGATTTCGGGGTAGGAATGTTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| CDS-3UTR TCA 90 bp | GAGCTGAAAATTAGATGTTTCAGTGGGCGCTGCCTCTGGGCCTCTGAGGCAGAGAATCAAACACTCCTCTaGCCAGAAACATTCCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: ELKIRCFSGRCLWASEAENQTLL*PETFPT Trigger: GGTTGGGAATGTTTCTGGTCAGAGGAGTGTTTGATT...CTCTGCCTCAGAGGCCCAGAGGCAGCGCCCACTGAAACATCTAATTTTCAGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| CDS-3UTR TCA 90 bp | ACCACAAATGACACCTCCAATCAGAAACATTCCAACCCTGAGATAAAGCGCCCTGCAAAACCCCATCTCTaGAAGCTGCAACTGCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TTNDTSNQKHSNPEIKRPAKPHL*KLQLPP Trigger: GGGAGGCAGTTGCAGCTTTCAGAGATGGGGTTTTGC...AGGGCGCTTTATCTCAGGGTTGGAATGTTTCTGATTGGAGGTGTCATTTGTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| CDS-3UTR TCA 90 bp | ACTCAGGCAGACTCAGGCCAGAGAAACCCAGTCCTCAGGAGAGCAGTGTGGGCTAGTGTATTTTATGTGTaGCACAAGCCAATTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TQADSGQRNPVLRRAVWASVFYV*HKPILL Trigger: AAGGAGAATTGGCTTGTGTCACACATAAAATACACT...AGCCCACACTGCTCTCCTGAGGACTGGGTTTCTCTGGCCTGAGTCTGCCTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR TCA 90 bp | CAGAAACATTCCTACCCCGAAATCAAACACTCCTCTGACCAGAAACATTCCCAAAAGAGAGAGTGCTCCTaGCAGCAATCGGCCAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QKHSYPEIKHSSDQKHSQKRECS*QQSARS Trigger: GCTTCTGGCCGATTGCTGTCAGGAGCACTCTCTCTT...TTGGGAATGTTTCTGGTCAGAGGAGTGTTTGATTTCGGGGTAGGAATGTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| CDS-3UTR GCA 90 bp | CCCGAAATCAAACACTCCTCTGACCAGAAACATTCCCAACCTGCGATAAGCTCTGAAACATTCCCAACCTaGGATAAGCTCTCCCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: PEIKHSSDQKHSQPAISSETFPT*DKLSLP Trigger: AGGGAGGGAGAGCTTATCGCAGGTTGGGAATGTTTC...AGAGCTTATCGCAGGTTGGGAATGTTTCTGGTCAGAGGAGTGTTTGATTTCGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| CDS-3UTR GCA 90 bp | TCAAATGAAGATCAGAGGCGTTTAGGCAGAAAGGAGGCATTCTGGACTGAAAGCTCTGGGCGAACTCTTTaGCACTGTTCTGGAGGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SNEDQRRLGRKEAFWTESSGRTL*HCSGGN Trigger: ATTTCCTCCAGAACAGTGGCAAAGAGTTCGCCCAGA...GCTTTCAGTCCAGAATGCCTCCTTTCTGCCTAAACGCCTCTGATCTTCATTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR CCA 90 bp | ATCGGCCAGAAGCCCCTCTCAGGTTTATTCTCCAAAATAAACCTGTCTTGGACTAAAATAAACCTGTCTTaGACTGTTGAGCCACTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IGQKPLSGLFSKINLSWTKINLS*TVEPLF Trigger: GAAAAGTGGCTCAACAGTCCAAGACAGGTTTATTTT...AGTCCAAGACAGGTTTATTTTGGAGAATAAACCTGAGAGGGGCTTCTGGCCGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| CDS GCA 90 bp | GCCCTTCCCATTGGCTGTGCCATGCCTCCGACCCTTCCCATTGGCTaGGCCTTGCCCCTACCCAGGCTGGCCGCGGGGCCGCGCGCGATT | + |
|
Preference number: 5 (lower is better) Translates to: ALPIGCAMPPTLPIG*ALPLPRLAAGPRAI Trigger: AATCGCGCGCGGCCCCGCGGCCAGCCTGGGTAGGGGCAAGGCGCAGCCAATGGGAAGGGTCGGAGGCATGGCACAGCCAATGGGAAGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360566.6 |
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| CDS GCA 90 bp | CCATTGGCTGTGCCATGCCTCCGACCCTTCCCATTGGCTGCGCCTTaGCCCTACCCAGGCTGGCCGCGGGGCCGCGCGCGATTTTCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PLAVPCLRPFPLAAP*PYPGWPRGRARFSS Trigger: GCTTGAAAATCGCGCGCGGCCCCGCGGCCAGCCTGGGTAGGGGCAAGGCGCAGCCAATGGGAAGGGTCGGAGGCATGGCACAGCCAATGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360566.6 |
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| CDS GCA 90 bp | CAGCGAAGCAGAGCGAGCAGCCAGGACAGGACGGCTGGGACAGGGTaGACGGGCGACCCCTCACTCCAGCAGCCTTTAAATCTCCCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: QRSRASSQDRTAGTG*TGDPSLQQPLNLPR Trigger: GCGCGGGAGATTTAAAGGCTGCTGGAGTGAGGGGTCGCCCGTGCACCCTGTCCCAGCCGTCCTGTCCTGGCTGCTCGCTCTGCTTCGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360566.6 |
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| CDS GCA 90 bp | GGTCGCTCCAGGGGTGTCCCTGTCTGGAAGGGACTCTGGGTGTCTTaGTGTGAGCACCACGGTGGCTCTCCCTTCACAATGAGGGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRSRGVPVWKGLWVS*CEHHGGSPFTMRAG Trigger: CCCAGCCCTCATTGTGAAGGGAGAGCCACCGTGGTGCTCACAGCAAGACACCCAGAGTCCCTTCCAGACAGGGACACCCCTGGAGCGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS GCA 90 bp | CTTCTGCTGGTGCAGGGTGCCCAGGATGAGTGTGAGAAGGAGGGCTaGCATGGTTCCCCTGCAGCCACCTCTGACTCTCGGCAGGTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLLVQGAQDECEKEG*HGSPAATSDSRQVG Trigger: GCCTACCTGCCGAGAGTCAGAGGTGGCTGCAGGGGAACCATGGCAGCCCTCCTTCTCACACTCATCCTGGGCACCCTGCACCAGCAGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642996.1 |
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| CDS CCA 90 bp | GTCCTTTCCATTGGCGGCAATTTCACGGGGCCCGATGTGAAAACGTaGCTGTCCCGTCGCACTCCGTGGGTCGCAGCAGAGGAGCGCACG | + |
|
Preference number: 5 (lower is better) Translates to: VLSIGGNFTGPDVKT*LSRRTPWVAAEERT Trigger: CGTGCGCTCCTCTGCTGCGACCCACGGAGTGCGACGGGACAGCCACGTTTTCACATCGGGCCCCGTGAAATTGCCGCCAATGGAAAGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615152.5 |
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| CDS GCA 90 bp | CCCGCACACTGGGTGGGTGATTGGTCTCCATCTCCCTCACTGGCGTaGTGTCTCCCCGAGGGCCTGGACTCCATCTGCTTTGCACTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PAHWVGDWSPSPSLA*CLPEGLDSICFALH Trigger: GTGAAGTGCAAAGCAGATGGAGTCCAGGCCCTCGGGGAGACAGCACGCCAGTGAGGGAGATGGAGACCAATCACCCACCCAGTGTGCGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381786.7 ENST00000641498.1 ENST00000646978.1 |
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| CDS TCA 90 bp | CTCCAGGGGTGTCCCTGTCTGGAAGGGACTCTGGGTGTCTTGCTGTaGGCACCACGGTGGCTCTCCCTTCACAATGAGGGCTGGGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LQGCPCLEGTLGVLL*APRWLSLHNEGWAS Trigger: AGAAGCCCAGCCCTCATTGTGAAGGGAGAGCCACCGTGGTGCTCACAGCAAGACACCCAGAGTCCCTTCCAGACAGGGACACCCCTGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS TCA 90 bp | TGGACCAAGTCCTTTCCATTGGCGGCAATTTCACGGGGCCCGATGTaGAAACGTGGCTGTCCCGTCGCACTCCGTGGGTCGCAGCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WTKSFPLAAISRGPM*KRGCPVALRGSQQR Trigger: CCTCTGCTGCGACCCACGGAGTGCGACGGGACAGCCACGTTTTCACATCGGGCCCCGTGAAATTGCCGCCAATGGAAAGGACTTGGTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615152.5 |
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| CDS GCA 90 bp | CTCACTGGCGTGCTGTCTCCCCGAGGGCCTGGACTCCATCTGCTTTaGACTTCACGGTCTCCCAGCACCCTCCTCCGTGTGATCTTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: LTGVLSPRGPGLHLL*TSRSPSTLLRVILE Trigger: TTCCAAGATCACACGGAGGAGGGTGCTGGGAGACCGTGAAGTGCAAAGCAGATGGAGTCCAGGCCCTCGGGGAGACAGCACGCCAGTGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS GCA 90 bp | CTCACTGGCGTGCTGTCTCCCCGAGGGCCTGGACTCCATCTGCTTTaGACTTCACGGTCTCCCAGCACCTTGCTAAAACCCAGTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LTGVLSPRGPGLHLL*TSRSPSTLLKPSSS Trigger: GCTGGAACTGGGTTTTAGCAAGGTGCTGGGAGACCGTGAAGTGCAAAGCAGATGGAGTCCAGGCCCTCGGGGAGACAGCACGCCAGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000641498.1 ENST00000646978.1 |
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| CDS TCA 90 bp | CCACCTGCTCCGCAGGCCTGTGTGGAGTCCAGTGAAAGGATATGCTaGAGCTTGGAGCCCAGCGCCCTCTGTGCATTCTTGGTGAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PPAPQACVESSERIC*SLEPSALCAFLVSS Trigger: GGAACTCACCAAGAATGCACAGAGGGCGCTGGGCTCCAAGCTTCAGCATATCCTTTCACTGGACTCCACACAGGCCTGCGGAGCAGGTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS-3UTR CAA 90 bp | CCAGGGAGGGGACGCAGCTCTGGGCGAACTCTTTGCCACTGTTCTGGAGGAAATCGGTGCACAAGCTCCTaGGGCTGTAGCCTCCTTATC | + |
|
Preference number: 5 (lower is better) Translates to: PGRGRSSGRTLCHCSGGNRCTSS*GCSLLI Trigger: GATAAGGAGGCTACAGCCCAAGGAGCTTGTGCACCG...ATTTCCTCCAGAACAGTGGCAAAGAGTTCGCCCAGAGCTGCGTCCCCTCCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS TCA 90 bp | CCCTGGCCTGCAGGCTTTGCGGGTTCCATTTCCCCCACTCCGGCATaGGAGGCAGTGGGTGTGATTGAAAGCAGCAGATCTGCTGTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: PWPAGFAGSISPTPA*EAVGVIESSRSAVY Trigger: ATAGACAGCAGATCTGCTGCTTTCAATCACACCCACTGCCTCTCATGCCGGAGTGGGGGAAATGGAACCCGCAAAGCCTGCAGGCCAGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS TCA 90 bp | TCTCCAGACTCTGCAGTGAGAGAACTGGTTGAGATCCTGGAAGACTaGAAGCTGCAACTGCCTCCCGCTTCCACTGGCGCACCCCGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SPDSAVRELVEILED*KLQLPPASTGAPRV Trigger: TACTCGGGGTGCGCCAGTGGAAGCGGGAGGCAGTTGCAGCTTTCAGTCTTCCAGGATCTCAACCAGTTCTCTCACTGCAGAGTCTGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS GCA 90 bp | AAGGGGCTAGGGATGGGTGATTGTACATGTAAACCCTTCTGCTGGTaGAGGGTGCCCAGGATGAGTGTGAGAAGGAGGGCTGCCATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KGLGMGDCTCKPFCW*RVPRMSVRRRAAMV Trigger: AACCATGGCAGCCCTCCTTCTCACACTCATCCTGGGCACCCTGCACCAGCAGAAGGGTTTACATGTACAATCACCCATCCCTAGCCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642996.1 |
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| CDS-3UTR CAA 90 bp | CTCCTTCCAATGTGGCCAAGGGAAGCCAAAAGATTGGACACCCCTGCCTTACAGCGGTCTCCCAGCACCTaGCTAAAACCCAGTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLPMWPREAKRLDTPALQRSPST*LKPSSS Trigger: GCTGGAACTGGGTTTTAGCAAGGTGCTGGGAGACCG...CTGTAAGGCAGGGGTGTCCAATCTTTTGGCTTCCCTTGGCCACATTGGAAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS TCA 90 bp | GGCTCTCCCTTCACAATGAGGGCTGGGCTTCTCCAGACTCTGCAGTaGGAGAACTGGTTGAGATCCTGGAAGACTGAAAGCTGCAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: GSPFTMRAGLLQTLQ*ENWLRSWKTESCNC Trigger: GCAGTTGCAGCTTTCAGTCTTCCAGGATCTCAACCAGTTCTCTCACTGCAGAGTCTGGAGAAGCCCAGCCCTCATTGTGAAGGGAGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS TCA 90 bp | GGAGTTATGAAACCACAGCTTCTGGATCCTCAACACGCCTCACGATaGCAGGACCCCTCTTGCTGCTTAGGGAGCTGCCCCAAGTCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GVMKPQLLDPQHASR*QDPSCCLGSCPKSL Trigger: AAGAGACTTGGGGCAGCTCCCTAAGCAGCAAGAGGGGTCCTGTCATCGTGAGGCGTGTTGAGGATCCAGAAGCTGTGGTTTCATAACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642996.1 |
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| CDS-3UTR CAA 90 bp | ATCGGCCAGAAGCCCCTCTCAGGTTTATTCTCCAAAATAAACCTGTCTTGGACTGGCGGCGTGTTCTCCTaGTCGACCAAGCTGAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: IGQKPLSGLFSKINLSWTGGVFS*STKLSP Trigger: GGGGCTCAGCTTGGTCGACAAGGAGAACACGCCGCC...AGTCCAAGACAGGTTTATTTTGGAGAATAAACCTGAGAGGGGCTTCTGGCCGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| CDS GCA 90 bp | TCTCCCAGCACCCTCCTCCGTGTGATCTTGGAATCCTTAAGCACATaGATTCTTGACTCCAAGACCAGACACCAGGCCTCCTCCATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPSTLLRVILESLST*ILDSKTRHQASSIP Trigger: TGGAATGGAGGAGGCCTGGTGTCTGGTCTTGGAGTCAAGAATGCATGTGCTTAAGGATTCCAAGATCACACGGAGGAGGGTGCTGGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS GCA 90 bp | AATTTATTTCTCACAGCTCTGGGGGCTGGAAATCTCACAGCAAGGTaGCGGCAGGTTTGGTGTCTGGTGAGGCCTCTCTTCTTGGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: NLFLTALGAGNLTAR*RQVWCLVRPLFLAC Trigger: ACAAGCCAAGAAGAGAGGCCTCACCAGACACCAAACCTGCCGGCACCTTGCTGTGAGATTTCCAGCCCCCAGAGCTGTGAGAAATAAATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS GCA 90 bp | CCTGGCCACGTAATTAACATAGCCATTGTAGAAGACGCCGAAAGATaGGTACGTGTTGTTAAAGGCCGGGTGAAGTCGCCATCCTCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PGHVINIAIVEDAER*VRVVKGRVKSPSSP Trigger: AGGGGAGGATGGCGACTTCACCCGGCCTTTAACAACACGTACGCATCTTTCGGCGTCTTCTACAATGGCTATGTTAATTACGTGGCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000607140.1 ENST00000641198.1 |
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| CDS-3UTR CAA 90 bp | ACCACAAATGACACCTCCAATCAGAAACATTCCAACCCTGAGATAAAGCGCCCTCGGTCTCCCAGCACCTaGCTAAAACCCAGTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TTNDTSNQKHSNPEIKRPRSPST*LKPSSS Trigger: GCTGGAACTGGGTTTTAGCAAGGTGCTGGGAGACCG...AGGGCGCTTTATCTCAGGGTTGGAATGTTTCTGATTGGAGGTGTCATTTGTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| CDS-3UTR CAA 90 bp | TCAAATGAAGATCAGAGGCGTTTAGGCAGAAAGGAGGCATTCTGGACTGAAAGCAGAGAGCCCATGTCATaGTGCGAACTTTCACCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SNEDQRRLGRKEAFWTESREPMS*CELSPR Trigger: GCGAGGTGAAAGTTCGCACAATGACATGGGCTCTCT...GCTTTCAGTCCAGAATGCCTCCTTTCTGCCTAAACGCCTCTGATCTTCATTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS-3UTR CAA 90 bp | AGTAGCCAGAAAGAGCACGTCGCCCCTCATCCTTTTATAACTATAGGGTCTGGACTAAGCTGTGCTTTCTaGAAGCCCTGTGAGCTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSQKEHVAPHPFITIGSGLSCAF*KPCELK Trigger: TTTCAGCTCACAGGGCTTCAAGAAAGCACAGCTTAG...TCCAGACCCTATAGTTATAAAAGGATGAGGGGCGACGTGCTCTTTCTGGCTACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| CDS TCA 90 bp | ACATTTAATGAAATGGCTTTCAGACACCACACAGTGACGGAGTTATaGAACCACAGCTTCTGGATCCTCAACACGCCTCACGATGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: TFNEMAFRHHTVTEL*NHSFWILNTPHDDR Trigger: CCTGTCATCGTGAGGCGTGTTGAGGATCCAGAAGCTGTGGTTTCATAACTCCGTCACTGTGTGGTGTCTGAAAGCCATTTCATTAAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642996.1 |
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| CDS-3UTR CAA 90 bp | CCCGAAATCAAACACTCCTCTGACCAGAAACATTCCCAACCTGCGATAAGCTCTAGGAGCATCAACATTTaGGACAAACAGCAGCATTTT | + |
|
Preference number: 5 (lower is better) Translates to: PEIKHSSDQKHSQPAISSRSINI*DKQQHF Trigger: AAAATGCTGCTGTTTGTCCAAAATGTTGATGCTCCT...AGAGCTTATCGCAGGTTGGGAATGTTTCTGGTCAGAGGAGTGTTTGATTTCGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| CDS-3UTR CAA 90 bp | CAGAAACATTCCTACCCCGAAATCAAACACTCCTCTGACCAGAAACATTCCCAAACTATAGGGTCTGGATaGACAAAGCAGGAGCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: QKHSYPEIKHSSDQKHSQTIGSG*TKQEHQ Trigger: TTGATGCTCCTGCTTTGTCAATCCAGACCCTATAGT...TTGGGAATGTTTCTGGTCAGAGGAGTGTTTGATTTCGGGGTAGGAATGTTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000641498.1 |
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| CDS-3UTR CAA 90 bp | CAGCTATCGTTAGTGTTAGTGTATTTTATGTGTGACACAAGCCAATTCTCCTTCCTCTGGGCGAACTCTTaGCCACTGTTCTGGAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QLSLVLVYFMCDTSQFSFLWANS*PLFWRK Trigger: TTTCCTCCAGAACAGTGGCAAAGAGTTCGCCCAGAG...GAAGGAGAATTGGCTTGTGTCACACATAAAATACACTAACACTAACGATAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000646978.1 |
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| CDS TCA 90 bp | GACGAGGAAAGCGAACTAGTTCGACCTCAGATCGTCAACGTCAAATaGATGAAAGATGTTTTGGAAACTCACCAAGTTTTCATTTACTAT | + |
|
Preference number: 5 (lower is better) Translates to: DEESELVRPQIVNVK*MKDVLETHQVFIYY Trigger: ATAGTAAATGAAAACTTGGTGAGTTTCCAAAACATCTTTCATTCATTTGACGTTGACGATCTGAGGTCGAACTAGTTCGCTTTCCTCGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000459969.5 |
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| CDS CAA 90 bp | GGTCCCGCGGGACCAGGGCCGCAGCCCCTGAGGGTCTCGGCGGCCTaGGCGCGCGCGGGCCCCGGTTCGCCCGGGAACCGTTTAGGATTG | + |
|
Preference number: 6 (lower is better) Translates to: GPAGPGPQPLRVSAA*ARAGPGSPGNRLGL Trigger: CAATCCTAAACGGTTCCCGGGCGAACCGGGGCCCGCGCGCGCCAAGGCCGCCGAGACCCTCAGGGGCTGCGGCCCTGGTCCCGCGGGACC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000360566.6 |
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| CDS CCA 72 bp | AAATCTCCCGCGCCGCGCGCTCCCGGCCCTTCCCATTaGCTTTGGTGCCCCGGCCCTTCCCATTGGCTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: KSPAPRAPGPSH*LWCPGPSHWLC Trigger: GCACAGCCAATGGGAAGGGCCGGGGCACCAAAGCCAATGGGAAGGGCCGGGAGCGCGCGGCGCGGGAGATTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360566.6 |
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| CDS CCA 72 bp | GCAGCGAAGCAGAGCGAGCAGCCAGGACAGGACGGCTaGGACAGGGTGCACGGGCGACCCCTCACTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: AAKQSEQPGQDG*DRVHGRPLTPA Trigger: TGCTGGAGTGAGGGGTCGCCCGTGCACCCTGTCCCAGCCGTCCTGTCCTGGCTGCTCGCTCTGCTTCGCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000360566.6 ENST00000459969.5 |
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| CDS CAA 90 bp | CGCTCCCGGCCCTTCCCATTGGCTTTGGTGCCCCGGCCCTTCCCATaGGCTGTGCCATGCCTCCGACCCTTCCCATTGGCTGCGCCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: RSRPFPLALVPRPFP*AVPCLRPFPLAAPC Trigger: GCAAGGCGCAGCCAATGGGAAGGGTCGGAGGCATGGCACAGCCAATGGGAAGGGCCGGGGCACCAAAGCCAATGGGAAGGGCCGGGAGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360566.6 |
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| CDS CCA 72 bp | CCCGATGTGAAAACGTGGCTGTCCCGTCGCACTCCGTaGGTCGCAGCAGAGGAGCGCACGCCCGAACCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PDVKTWLSRRTP*VAAEERTPEPG Trigger: TCCCGGTTCGGGCGTGCGCTCCTCTGCTGCGACCCACGGAGTGCGACGGGACAGCCACGTTTTCACATCGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615152.5 |
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| CDS CAA 72 bp | TTCCCATTGGCTGTGCCATGCCTCCGACCCTTCCCATaGGCTGCGCCTTGCCCCTACCCAGGCTGGCCGCGG | + |
|
Preference number: 6 (lower is better) Translates to: FPLAVPCLRPFP*AAPCPYPGWPR Trigger: CCGCGGCCAGCCTGGGTAGGGGCAAGGCGCAGCCAATGGGAAGGGTCGGAGGCATGGCACAGCCAATGGGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000360566.6 |
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| CDS CCA 72 bp | AAGTCTCTTGAGGCCTGGGGCCCAGGACCACTGAGGTaGGGTCTTCACTGCGGAGTCCCTGGGGTCTGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: KSLEAWGPGPLR*GLHCGVPGVCP Trigger: GGGGCAGACCCCAGGGACTCCGCAGTGAAGACCCCACCTCAGTGGTCCTGGGCCCCAGGCCTCAAGAGACTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000642996.1 |
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| CDS GCA 72 bp | CTGGCGTGCTGTCTCCCCGAGGGCCTGGACTCCATCTaGTTTGCACTTCACGGTCTCCCAGCACCCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LACCLPEGLDSI*FALHGLPAPSS Trigger: GGAGGAGGGTGCTGGGAGACCGTGAAGTGCAAAGCAGATGGAGTCCAGGCCCTCGGGGAGACAGCACGCCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS GCA 72 bp | GGCTCACATCACCCCAGTTTCCCACCCTCCCTGGCCTaGAGGCTTTGCGGGTTCCATTTCCCCCACTCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: GSHHPSFPPSLA*RLCGFHFPHSG Trigger: GCCGGAGTGGGGGAAATGGAACCCGCAAAGCCTGCAGGCCAGGGAGGGTGGGAAACTGGGGTGATGTGAGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS CCA 72 bp | GGTCGCTCCAGGGGTGTCCCTGTCTGGAAGGGACTCTaGGTGTCTTGCTGTGAGCACCACGGTGGCTCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GRSRGVPVWKGL*VSCCEHHGGSP Trigger: GGGAGAGCCACCGTGGTGCTCACAGCAAGACACCCAGAGTCCCTTCCAGACAGGGACACCCCTGGAGCGACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS CAA 90 bp | GGGCTCACATCACCCCAGTTTCCCACCCTCCCTGGCCTGCAGGCTTaGCGGGTTCCATTTCCCCCACTCCGGCATGAGAGGCAGTGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: GLTSPQFPTLPGLQA*RVPFPPLRHERQWV Trigger: CACCCACTGCCTCTCATGCCGGAGTGGGGGAAATGGAACCCGCAAAGCCTGCAGGCCAGGGAGGGTGGGAAACTGGGGTGATGTGAGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS GCA 72 bp | GTGCTGTCTCCCCGAGGGCCTGGACTCCATCTGCTTTaGACTTCACGGTCTCCCAGCACCCTCCTCCGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: VLSPRGPGLHLL*TSRSPSTLLRV Trigger: CACACGGAGGAGGGTGCTGGGAGACCGTGAAGTGCAAAGCAGATGGAGTCCAGGCCCTCGGGGAGACAGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS GCA 72 bp | GTGCAGGGTGCCCAGGATGAGTGTGAGAAGGAGGGCTaGCATGGTTCCCCTGCAGCCACCTCTGACTCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: VQGAQDECEKEG*HGSPAATSDSR Trigger: CCGAGAGTCAGAGGTGGCTGCAGGGGAACCATGGCAGCCCTCCTTCTCACACTCATCCTGGGCACCCTGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642996.1 |
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| CDS CCA 72 bp | CCCGAGCTTCTCATCCCCGCACACTGGGTGGGTGATTaGTCTCCATCTCCCTCACTGGCGTGCTGTCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: PELLIPAHWVGD*SPSPSLACCLP Trigger: GGGGAGACAGCACGCCAGTGAGGGAGATGGAGACCAATCACCCACCCAGTGTGCGGGGATGAGAAGCTCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381786.7 ENST00000641498.1 ENST00000646978.1 |
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| CDS CAA 72 bp | CGTGCTGTCTCCCCGAGGGCCTGGACTCCATCTGCTTaGCACTTCACGGTCTCCCAGCACCCTCCTCCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: RAVSPRAWTPSA*HFTVSQHPPPC Trigger: ACACGGAGGAGGGTGCTGGGAGACCGTGAAGTGCAAAGCAGATGGAGTCCAGGCCCTCGGGGAGACAGCACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS CAA 90 bp | CCTCACTGGCGTGCTGTCTCCCCGAGGGCCTGGACTCCATCTGCTTaGCACTTCACGGTCTCCCAGCACCCTCCTCCGTGTGATCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PHWRAVSPRAWTPSA*HFTVSQHPPPCDLG Trigger: TCCAAGATCACACGGAGGAGGGTGCTGGGAGACCGTGAAGTGCAAAGCAGATGGAGTCCAGGCCCTCGGGGAGACAGCACGCCAGTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS TCA 72 bp | GGGTCCACCTGCTCCGCAGGCCTGTGTGGAGTCCAGTaGAAGGATATGCTGAAGCTTGGAGCCCAGCGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GSTCSAGLCGVQ*KDMLKLGAQRP Trigger: AGGGCGCTGGGCTCCAAGCTTCAGCATATCCTTTCACTGGACTCCACACAGGCCTGCGGAGCAGGTGGACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS CCA 72 bp | CACACTGGGTGGGTGATTGGTCTCCATCTCCCTCACTaGCGTGCTGTCTCCCCGAGGGCCTGGACTCCATCT | + |
|
Preference number: 6 (lower is better) Translates to: HTGWVIGLHLPH*RAVSPRAWTPS Trigger: AGATGGAGTCCAGGCCCTCGGGGAGACAGCACGCCAGTGAGGGAGATGGAGACCAATCACCCACCCAGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000381786.7 ENST00000641498.1 ENST00000646978.1 |
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| CDS CCA 72 bp | ATTGGCGGCAATTTCACGGGGCCCGATGTGAAAACGTaGCTGTCCCGTCGCACTCCGTGGGTCGCAGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: IGGNFTGPDVKT*LSRRTPWVAAE Trigger: CTCTGCTGCGACCCACGGAGTGCGACGGGACAGCCACGTTTTCACATCGGGCCCCGTGAAATTGCCGCCAAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000615152.5 |
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| CDS TCA 72 bp | TCCTTTCCATTGGCGGCAATTTCACGGGGCCCGATGTaGAAACGTGGCTGTCCCGTCGCACTCCGTGGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SFPLAAISRGPM*KRGCPVALRGS Trigger: CGACCCACGGAGTGCGACGGGACAGCCACGTTTTCACATCGGGCCCCGTGAAATTGCCGCCAATGGAAAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000615152.5 |
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| CDS TCA 72 bp | TGTCCCTGTCTGGAAGGGACTCTGGGTGTCTTGCTGTaGGCACCACGGTGGCTCTCCCTTCACAATGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: CPCLEGTLGVLL*APRWLSLHNEG Trigger: GCCCTCATTGTGAAGGGAGAGCCACCGTGGTGCTCACAGCAAGACACCCAGAGTCCCTTCCAGACAGGGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS TCA 72 bp | CCCTTGCCAACGGGAACCTCCAAGTGCATTTATGTCTaGGGCGTGACGGTCACCCCTGCAGGGGTCTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: PLPTGTSKCIYV*GVTVTPAGVFW Trigger: CCAGAAGACCCCTGCAGGGGTGACCGTCACGCCTCAGACATAAATGCACTTGGAGGTTCCCGTTGGCAAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000498343.5 |
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| CDS GCA 72 bp | AGGGGTGTCCCTGTCTGGAAGGGACTCTGGGTGTCTTaGTGTGAGCACCACGGTGGCTCTCCCTTCACAATG | + |
|
Preference number: 6 (lower is better) Translates to: RGVPVWKGLWVS*CEHHGGSPFTM Trigger: CATTGTGAAGGGAGAGCCACCGTGGTGCTCACAGCAAGACACCCAGAGTCCCTTCCAGACAGGGACACCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS GCA 72 bp | CTCACAGCTCTGGGGGCTGGAAATCTCACAGCAAGGTaGCGGCAGGTTTGGTGTCTGGTGAGGCCTCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LTALGAGNLTAR*RQVWCLVRPLF Trigger: GAAGAGAGGCCTCACCAGACACCAAACCTGCCGGCACCTTGCTGTGAGATTTCCAGCCCCCAGAGCTGTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS GCA 72 bp | GTGCTGTCTCCCCGAGGGCCTGGACTCCATCTGCTTTaGACTTCACGGTCTCCCAGCACCTTGCTAAAACCC | + |
|
Preference number: 6 (lower is better) Translates to: VLSPRGPGLHLL*TSRSPSTLLKP Trigger: GGGTTTTAGCAAGGTGCTGGGAGACCGTGAAGTGCAAAGCAGATGGAGTCCAGGCCCTCGGGGAGACAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000641498.1 ENST00000646978.1 |
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| CDS CAA 72 bp | CGTGCTGTCTCCCCGAGGGCCTGGACTCCATCTGCTTaGCACTTCACGGTCTCCCAGCACCTTGCTAAAACC | + |
|
Preference number: 6 (lower is better) Translates to: RAVSPRAWTPSA*HFTVSQHLAKT Trigger: GGTTTTAGCAAGGTGCTGGGAGACCGTGAAGTGCAAAGCAGATGGAGTCCAGGCCCTCGGGGAGACAGCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000641498.1 ENST00000646978.1 |
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| CDS TCA 72 bp | CTTGCTGTGAGCACCACGGTGGCTCTCCCTTCACAATaGGGGCTGGGCTTCTCCAGACTCTGCAGTGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: LAVSTTVALPSQ*GLGFSRLCSER Trigger: TCTCTCACTGCAGAGTCTGGAGAAGCCCAGCCCTCATTGTGAAGGGAGAGCCACCGTGGTGCTCACAGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS TCA 72 bp | CCATTTCCCCCACTCCGGCATGAGAGGCAGTGGGTGTaGTTGAAAGCAGCAGATCTGCTGTCTATGGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: PFPPLRHERQWV*LKAADLLSMGP Trigger: GGGCCCCATAGACAGCAGATCTGCTGCTTTCAATCACACCCACTGCCTCTCATGCCGGAGTGGGGGAAATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS TCA 72 bp | AAACCACAGCTTCTGGATCCTCAACACGCCTCACGATaGCAGGACCCCTCTTGCTGCTTAGGGAGCTGCCCC | + |
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Preference number: 6 (lower is better) Translates to: KPQLLDPQHASR*QDPSCCLGSCP Trigger: GGGGCAGCTCCCTAAGCAGCAAGAGGGGTCCTGTCATCGTGAGGCGTGTTGAGGATCCAGAAGCTGTGGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642996.1 |
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| CDS GCA 72 bp | CCCTCTTGCCAATCCAGTGTTGTTCTAACTGAAAGCTaGAACTGCCTCCCGCTTCCACTGGCGCACCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: PSCQSSVVLTES*NCLPLPLAHPE Trigger: CTCGGGGTGCGCCAGTGGAAGCGGGAGGCAGTTGCAGCTTTCAGTTAGAACAACACTGGATTGGCAAGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642996.1 |
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| CDS GCA 72 bp | GGGATGGGTGATTGTACATGTAAACCCTTCTGCTGGTaGAGGGTGCCCAGGATGAGTGTGAGAAGGAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: GMGDCTCKPFCW*RVPRMSVRRRA Trigger: AGCCCTCCTTCTCACACTCATCCTGGGCACCCTGCACCAGCAGAAGGGTTTACATGTACAATCACCCATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642996.1 |
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| CDS GCA 72 bp | GGGCTAGGGATGGGTGATTGTACATGTAAACCCTTCTaGTGGTGCAGGGTGCCCAGGATGAGTGTGAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: GLGMGDCTCKPF*WCRVPRMSVRR Trigger: CCTTCTCACACTCATCCTGGGCACCCTGCACCAGCAGAAGGGTTTACATGTACAATCACCCATCCCTAGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642996.1 |
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| CDS TCA 72 bp | CTGGGCTTCTCCAGACTCTGCAGTGAGAGAACTGGTTaGGATCCTGGAAGACTGAAAGCTGCAACTGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LGFSRLCSERTG*DPGRLKAATAS Trigger: GGAGGCAGTTGCAGCTTTCAGTCTTCCAGGATCTCAACCAGTTCTCTCACTGCAGAGTCTGGAGAAGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS TCA 72 bp | TCAGTCTCCCTCTTGCCAATCCAGTGTTGTTCTAACTaGAAGCTGCAACTGCCTCCCGCTTCCACTGGCGCA | + |
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Preference number: 6 (lower is better) Translates to: SVSLLPIQCCSN*KLQLPPASTGA Trigger: TGCGCCAGTGGAAGCGGGAGGCAGTTGCAGCTTTCAGTTAGAACAACACTGGATTGGCAAGAGGGAGACTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642996.1 |
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| CDS CCA 72 bp | CTAGGGATGGGTGATTGTACATGTAAACCCTTCTGCTaGTGCAGGGTGCCCAGGATGAGTGTGAGAAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: LGMGDCTCKPFC*CRVPRMSVRRR Trigger: CCTCCTTCTCACACTCATCCTGGGCACCCTGCACCAGCAGAAGGGTTTACATGTACAATCACCCATCCCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642996.1 |
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| CDS GCA 72 bp | ACCCTCCTCCGTGTGATCTTGGAATCCTTAAGCACATaGATTCTTGACTCCAAGACCAGACACCAGGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: TLLRVILESLST*ILDSKTRHQAS Trigger: GGAGGCCTGGTGTCTGGTCTTGGAGTCAAGAATGCATGTGCTTAAGGATTCCAAGATCACACGGAGGAGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS CAA 90 bp | CTGCTTTGCACTTCACGGTCTCCCAGCACCCTCCTCCGTGTGATCTaGGAATCCTTAAGCACATGCATTCTTGACTCCAAGACCAGACAC | + |
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Preference number: 6 (lower is better) Translates to: LLCTSRSPSTLLRVI*ESLSTCILDSKTRH Trigger: GTGTCTGGTCTTGGAGTCAAGAATGCATGTGCTTAAGGATTCCAAGATCACACGGAGGAGGGTGCTGGGAGACCGTGAAGTGCAAAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS TCA 72 bp | TTCACAATGAGGGCTGGGCTTCTCCAGACTCTGCAGTaGGAGAACTGGTTGAGATCCTGGAAGACTGAAAGC | + |
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Preference number: 6 (lower is better) Translates to: FTMRAGLLQTLQ*ENWLRSWKTES Trigger: GCTTTCAGTCTTCCAGGATCTCAACCAGTTCTCTCACTGCAGAGTCTGGAGAAGCCCAGCCCTCATTGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS TCA 72 bp | GGATATATGCCATCTAGCATCTCAGGTCCCCGTCAGTaGACACAAGAGCATGCCCGAGTTGTGTTTGGGGTT | + |
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Preference number: 6 (lower is better) Translates to: GYMPSSISGPRQ*TQEHARVVFGV Trigger: AACCCCAAACACAACTCGGGCATGCTCTTGTGTTCACTGACGGGGACCTGAGATGCTAGATGGCATATATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000462343.1 |
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| CDS GCA 72 bp | GGATATCTCTTCTGTAAAGTGTCTGTTGAGGTCGTTTaGCCGTCCTCCTCTCGGCTTGCCTGTCTTCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: GYLFCKVSVEVV*PSSSRLACLLA Trigger: AGCAAGAAGACAGGCAAGCCGAGAGGAGGACGGGCAAACGACCTCAACAGACACTTTACAGAAGAGATATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS CAA 72 bp | ACTTCACGGTCTCCCAGCACCCTCCTCCGTGTGATCTaGGAATCCTTAAGCACATGCATTCTTGACTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: TSRSPSTLLRVI*ESLSTCILDSK Trigger: CTTGGAGTCAAGAATGCATGTGCTTAAGGATTCCAAGATCACACGGAGGAGGGTGCTGGGAGACCGTGAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS CAA 72 bp | CAGGTCCCCGTCAGTGAACACAAGAGCATGCCCGAGTaGTGTTTGGGGTTTAGGTCACCCTATTATTTGACT | + |
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Preference number: 6 (lower is better) Translates to: QVPVSEHKSMPE*CLGFRSPYYLT Trigger: AGTCAAATAATAGGGTGACCTAAACCCCAAACACAACTCGGGCATGCTCTTGTGTTCACTGACGGGGACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000462343.1 |
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| CDS TCA 72 bp | CGTCCTCCTCTCGGCTTGCCTGTCTTCTTGCTGACTTaGAGGAGTTCTTCATATTCTAATTTCCCATCTCAG | + |
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Preference number: 6 (lower is better) Translates to: RPPLGLPVFLLT*RSSSYSNFPSQ Trigger: CTGAGATGGGAAATTAGAATATGAAGAACTCCTTCAAGTCAGCAAGAAGACAGGCAAGCCGAGAGGAGGACG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS TCA 72 bp | TTGCCCGTCCTCCTCTCGGCTTGCCTGTCTTCTTGCTaGCTTGAAGGAGTTCTTCATATTCTAATTTCCCAT | + |
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Preference number: 6 (lower is better) Translates to: LPVLLSACLSSC*LEGVLHILISH Trigger: ATGGGAAATTAGAATATGAAGAACTCCTTCAAGTCAGCAAGAAGACAGGCAAGCCGAGAGGAGGACGGGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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| CDS GCA 72 bp | GTAATTAACATAGCCATTGTAGAAGACGCCGAAAGATaGGTACGTGTTGTTAAAGGCCGGGTGAAGTCGCCA | + |
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Preference number: 6 (lower is better) Translates to: VINIAIVEDAER*VRVVKGRVKSP Trigger: TGGCGACTTCACCCGGCCTTTAACAACACGTACGCATCTTTCGGCGTCTTCTACAATGGCTATGTTAATTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000607140.1 ENST00000641198.1 |
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| CDS CCA 72 bp | AGGCTATTCTGGTTCCAATTCAGAATCCCTGGCTCCTaGCTCAATGGGCTTTGTCCCAGAGATGTAATTTCT | + |
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Preference number: 6 (lower is better) Translates to: RLFWFQFRIPGS*LNGLCPRDVIS Trigger: AGAAATTACATCTCTGGGACAAAGCCCATTGAGCCAGGAGCCAGGGATTCTGAATTGGAACCAGAATAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000642996.1 |
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| CDS CAA 72 bp | AGGGGGCAGATGTGGTGGCCACAAAGAGTCATCACATaGCTACCACTTAATATTGTCTCAGCTTCTCTAGAG | + |
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Preference number: 6 (lower is better) Translates to: RGQMWWPQRVIT*LPLNIVSASLE Trigger: CTCTAGAGAAGCTGAGACAATATTAAGTGGTAGCAATGTGATGACTCTTTGTGGCCACCACATCTGCCCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000459969.5 |
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| CDS CAA 72 bp | GATAAGAGCTCTGGGACAAAGGCCAAATTCAAGTATTaGCCAATCCTCTTCCTAAAGGAAGAACTCACACCG | + |
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Preference number: 6 (lower is better) Translates to: DKSSGTKAKFKY*PILFLKEELTP Trigger: CGGTGTGAGTTCTTCCTTTAGGAAGAGGATTGGCAAATACTTGAATTTGGCCTTTGTCCCAGAGCTCTTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487591.5 |
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| CDS TCA 72 bp | CCGAGTTGTGTTTGGGGTTTAGGTCACCCTATTATTTaGCTTAGACTCACCTCATCTCTGCTAATAAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: PSCVWGLGHPII*LRLTSSLLISS Trigger: TGAACTTATTAGCAGAGATGAGGTGAGTCTAAGTCAAATAATAGGGTGACCTAAACCCCAAACACAACTCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462343.1 |
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| CDS CAA 72 bp | GAGAAATTCCCTAGTAGGCACATACGGTATCAGCAATaGAAGCATTACAGTAAAAGACCTCCGATTACCAAC | + |
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Preference number: 6 (lower is better) Translates to: EKFPSRHIRYQQ*KHYSKRPPITN Trigger: GTTGGTAATCGGAGGTCTTTTACTGTAATGCTTCAATTGCTGATACCGTATGTGCCTACTAGGGAATTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000462343.1 ENST00000487591.5 |
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| CDS CAA 90 bp | CAACTGCTAGATAAGAGCTCTGGGACAAAGGCCAAATTCAAGTATTaGCCAATCCTCTTCCTAAAGGAAGAACTCACACCGAAATGTTTT | + |
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Preference number: 6 (lower is better) Translates to: QLLDKSSGTKAKFKY*PILFLKEELTPKCF Trigger: AAAACATTTCGGTGTGAGTTCTTCCTTTAGGAAGAGGATTGGCAAATACTTGAATTTGGCCTTTGTCCCAGAGCTCTTATCTAGCAGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000487591.5 |
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| CDS TCA 72 bp | AGCGAACTAGTTCGACCTCAGATCGTCAACGTCAAATaGATGAAAGATGTTTTGGAAACTCACCAAGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: SELVRPQIVNVK*MKDVLETHQVF Trigger: GAAAACTTGGTGAGTTTCCAAAACATCTTTCATTCATTTGACGTTGACGATCTGAGGTCGAACTAGTTCGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000459969.5 |
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| CDS TCA 72 bp | AGAAATTCCCTAGTAGGCACATACGGTATCAGCAATTaGAGCATTACAGTAAAAGACCTCCGATTACCAACT | + |
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Preference number: 6 (lower is better) Translates to: RNSLVGTYGISN*SITVKDLRLPT Trigger: AGTTGGTAATCGGAGGTCTTTTACTGTAATGCTTCAATTGCTGATACCGTATGTGCCTACTAGGGAATTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000462343.1 ENST00000487591.5 |
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| CDS CAA 72 bp | AAATTCACTTTCCATATGAATATCTGCTCAGTCAGCTaGGGCTACTGTAACAAAATATTGAGTGCCTTAAAC | + |
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Preference number: 6 (lower is better) Translates to: KFTFHMNICSVS*GYCNKILSALN Trigger: GTTTAAGGCACTCAATATTTTGTTACAGTAGCCCAAGCTGACTGAGCAGATATTCATATGGAAAGTGAATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381786.7 |
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