RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RREB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000124782

Ensembl transcript IDs: ENST00000334984.10, ENST00000349384.10, ENST00000379933.7, ENST00000379938.7, ENST00000467782.5, ENST00000471433.5, ENST00000475946.5, ENST00000483150.1, ENST00000491191.5, ENST00000611109.1

Found 2021 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTTAAGGCACTGGAATCGGCACGGGCTGTGGCCTCCCGCGCAGGCTaGGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTG +
Preference number: 1 (lower is better)
Translates to: VKALESARAVASRAG*GKAMALSEQPRSCL
Trigger: CAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCCTGCGCGGGAGGCCACAGCCCGTGCCGATTCCAGTGCCTTAAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
3UTR CCA 90 bp GGGACCCCTGAGGTCTTGGCTGAGGGACCAGGAGCTCAGGTGCAGTaGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTC +
Preference number: 1 (lower is better)
Translates to: GTPEVLAEGPGAQVQ*GTFSSLQAETVREV
Trigger: GACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCCCTCAGCCAAGACCTCAGGGGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR TCA 90 bp TTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTaGGCTGCTCCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCT +
Preference number: 1 (lower is better)
Translates to: LMPVPWMHASSLHPL*AAPGPCLGRLLTAP
Trigger: AGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGGAGCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR GCA 90 bp GCAGGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTaGTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT +
Preference number: 1 (lower is better)
Translates to: AGCGKAMALSEQPRS*LSLSLSLSLSLSLS
Trigger: AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCCTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
3UTR GCA 90 bp GGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTaGTCCAGGCACGGCCCTGGCTTCTTGATGCCTGTTCCCTGGATG +
Preference number: 1 (lower is better)
Translates to: GHWVTALLSPKSSLQ*SRHGPGFLMPVPWM
Trigger: CATCCAGGGAACAGGCATCAAGAAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR GCA 90 bp AAGAAAGGCTTGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTaGCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTG +
Preference number: 1 (lower is better)
Translates to: KKGLSHYSRRATTRG*QPQPQAHVNTGTWV
Trigger: CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACAAGCCTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
3UTR CCA 90 bp TTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTaGCTTCTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCA +
Preference number: 1 (lower is better)
Translates to: FAFSKVISAVLQARP*LLDACSLDACILTP
Trigger: TGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAGAAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR TCA 90 bp CTCTCTCTCACTCCTCAACAGCCAAAGGGCACTGAGGAAACCCCATaGAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGG +
Preference number: 1 (lower is better)
Translates to: LSLTPQQPKGTEETP*SIDALLCWLLSVLR
Trigger: CCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCCTCAGTGCCCTTTGGCTGTTGAGGAGTGAGAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
3UTR CCA 90 bp AGGAAGACTGGGAATACCTCGCTCACGAGTAATGTGCCTGGTCACTaGGTCACTGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCC +
Preference number: 1 (lower is better)
Translates to: RKTGNTSLTSNVPGH*VTALLSPKSSLQCS
Trigger: GGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAGCGAGGTATTCCCAGTCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR GCA 90 bp GGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTaGCTGCACAGGATGCTCATGGGTAAAAATAACCCTGCCTTTTTG +
Preference number: 1 (lower is better)
Translates to: GTFSSLQAETVREVY*LHRMLMGKNNPAFL
Trigger: CAAAAAGGCAGGGTTATTTTTACCCATGAGCATCCTGTGCAGGCAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR TCA 90 bp TCTCTCTCTCTCTCTCTCTCTCACTCCTCAACAGCCAAAGGGCACTaGGGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTT +
Preference number: 1 (lower is better)
Translates to: SLSLSLSHSSTAKGH*GNPMKYRRFALLAF
Trigger: AAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCCTCAGTGCCCTTTGGCTGTTGAGGAGTGAGAGAGAGAGAGAGAGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
3UTR GCA 90 bp TTAGGCTTAGCAGGAAGACTGGGAATACCTCGCTCACGAGTAATGTaGCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATCTC +
Preference number: 1 (lower is better)
Translates to: LGLAGRLGIPRSRVM*LVTGSLLCFLQSHL
Trigger: GAGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAGCGAGGTATTCCCAGTCTTCCTGCTAAGCCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR TCA 90 bp ATCTATCTTCCTGTGAAGTCTGGGAGGTTGGATTTCAGAAACTGGTaGAGTGGCGGAGAAAAGGGGGCGTGCACGTTTCTGTGTGAACAA +
Preference number: 1 (lower is better)
Translates to: IYLPVKSGRLDFRNW*SGGEKGACTFLCEQ
Trigger: TTGTTCACACAGAAACGTGCACGCCCCCTTTTCTCCGCCACTTCACCAGTTTCTGAAATCCAACCTCCCAGACTTCACAGGAAGATAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR GCA 90 bp CCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTaGAGTGACAGAAGAAAGGCTTGTCTCATTACAGTAGAAGAGCTA +
Preference number: 1 (lower is better)
Translates to: PGPCLGRLLTAPSKF*SDRRKACLITVEEL
Trigger: TAGCTCTTCTACTGTAATGAGACAAGCCTTTCTTCTGTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR GCA 90 bp GCACAGGTCTCCCAGGACAAATATTGCCCATTTGATTCTGCTCACTaGAGAGAACAGCAAACTGATGAACTAATAATAATAATAATAATA +
Preference number: 1 (lower is better)
Translates to: AQVSQDKYCPFDSAH*REQQTDELIIIIII
Trigger: TATTATTATTATTATTATTAGTTCATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGGAGACCTGTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
3UTR-3UTR TCA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCTCACTCCACCCTCTCTaGGCTGCTCCTGGACCATGC +
Preference number: 2 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGSLHPL*AAPGPC
Trigger: GCATGGTCCAGGAGCAGCTCAGAGAGGGTGGAGTGA...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR-3UTR GCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGACACGGGGACCTGGGTaGGGCACAGGTCTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: CLITVEELPPEGANHNRRTRGPG*GTGLPG
Trigger: TCCTGGGAGACCTGTGCCGCACCCAGGTCCCCGTGT...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
3UTR-3UTR GCA 90 bp CCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACACACGGGGACCTGGGTaGGGCACAGGTCTCCCAGGA +
Preference number: 2 (lower is better)
Translates to: PGPCLGRLLTAPSKFCSDTRGPG*GTGLPG
Trigger: TCCTGGGAGACCTGTGCCGCACCCAGGTCCCCGTGT...GTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR-3UTR CCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTCCAGGCACGGCCCTaGCTTCTTGATGCCTGTTCC +
Preference number: 2 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSLQARP*LLDACS
Trigger: GGAACAGGCATCAAGAAGCCAGGGCCGTGCCTGGAG...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR-3UTR GCA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGAAGTCATCTCTGCAGTaGTCCAGGCACGGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLKSSLQ*SRHGPG
Trigger: GCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTT...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR-3UTR CCA 90 bp CTGAGGGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGTTGATGCCTGTTCCCTaGATGCATGCATCCTCACTC +
Preference number: 2 (lower is better)
Translates to: LRDQELRCSGVHSPPCRRLMPVP*MHASSL
Trigger: GAGTGAGGATGCATGCATCCAGGGAACAGGCATCAA...CCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR CAA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTaGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC +
Preference number: 2 (lower is better)
Translates to: GCGKAMALSEQPRSC*SLSLSLSLSLSLSL
Trigger: GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
3UTR CAA 90 bp TCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCTaGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTC +
Preference number: 2 (lower is better)
Translates to: SPKSSLQCSRHGPGF*MPVPWMHASSLHPL
Trigger: GAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAGAAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR-3UTR GCA 90 bp CTGAGGGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGATAGACGCTTTGCTCTaGTGGCTTTTGTCTGTGCTG +
Preference number: 2 (lower is better)
Translates to: LRDQELRCSGVHSPPCRRIDALL*WLLSVL
Trigger: CAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTAT...CCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR-3UTR GCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCGCTCACGAGTAATGTaGCTGGTCACTGGGTCACTG +
Preference number: 2 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSRSRVM*LVTGSL
Trigger: CAGTGACCCAGTGACCAGGCACATTACTCGTGAGCG...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR-3UTR CCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAATCGGCACGGGCTGTaGCCTCCCGCGCAGGCTGCG +
Preference number: 2 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWNRHGL*PPAQAA
Trigger: CGCAGCCTGCGCGGGAGGCCACAGCCCGTGCCGATT...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
3UTR-3UTR TCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCACTGAGGAAACCCCATaGAGTATAGACGCTTTGCTC +
Preference number: 2 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLTEETP*SIDALL
Trigger: GAGCAAAGCGTCTATACTTCATGGGGTTTCCTCAGT...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
3UTR-3UTR CCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTTCTCTGAGCTGCTCCTaGACCATGCTTGGGAAGACT +
Preference number: 2 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSSLSCS*TMLGKT
Trigger: AGTCTTCCCAAGCATGGTCCAGGAGCAGCTCAGAGA...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR-3UTR GCA 90 bp AAGACTGGGAATACCTCGCTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTGCTGCTCCTGGACCATaGTTGGGAAGACTGCTCACG +
Preference number: 2 (lower is better)
Translates to: KTGNTSLTSNVPGHWVTAAAPGP*LGRLLT
Trigger: CGTGAGCAGTCTTCCCAAGCATGGTCCAGGAGCAGC...AGCAGTGACCCAGTGACCAGGCACATTACTCGTGAGCGAGGTATTCCCAGTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR CAA 90 bp AATACCTCGCTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTaGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCT +
Preference number: 2 (lower is better)
Translates to: NTSLTSNVPGHWVTA*LSPKSSLQCSRHGP
Trigger: AGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAGCGAGGTATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR-3UTR TCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTACTGAGGAAACCCCATaGAGTATAGACGCTTTGCTC +
Preference number: 2 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSTEETP*SIDALL
Trigger: GAGCAAAGCGTCTATACTTCATGGGGTTTCCTCAGT...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR-3UTR GCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTAGCCTCCCGCGCAGGCTaGGGTAAGGCTATGGCACTG +
Preference number: 2 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLASRAG*GKAMAL
Trigger: CAGTGCCATAGCCTTACCGCAGCCTGCGCGGGAGGC...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
3UTR-3UTR GCA 90 bp GCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCCATGCTTGGGAAGACTaGTCACGGCCCCTTCTAAAT +
Preference number: 2 (lower is better)
Translates to: ALLSPKSSLQCSRHGPGFHAWED*SRPLLN
Trigger: ATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATG...GAAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR-3UTR CCA 90 bp GGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAACACCCATGATAATATaGAGGGATCCGGTAAGTAGT +
Preference number: 2 (lower is better)
Translates to: GPGAQVQWGTFSSLQAETTPMII*RDPVSS
Trigger: ACTACTTACCGGATCCCTCCATATTATCATGGGTGT...TGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR-3UTR TCA 90 bp CTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGCTGCACTGAGGAAACCCCATaGAGTATAGACGCTTTGCTC +
Preference number: 2 (lower is better)
Translates to: LDACSLDACILTPPSLSCTEETP*SIDALL
Trigger: GAGCAAAGCGTCTATACTTCATGGGGTTTCCTCAGT...GCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR-3UTR TCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACAGCCAAAGGGCACTaGGGAAACCCCATGAAGTAT +
Preference number: 2 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLTAKGH*GNPMKY
Trigger: ATACTTCATGGGGTTTCCTCAGTGCCCTTTGGCTGT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
3UTR-3UTR TCA 90 bp CTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGCTGCACGCTAATGCTCAAATaGAGAGGTCCTCTCCAGACA +
Preference number: 2 (lower is better)
Translates to: LDACSLDACILTPPSLSCTLMLK*RGPLQT
Trigger: TGTCTGGAGAGGACCTCTTCATTTGAGCATTAGCGT...GCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR-3UTR GCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATAGACGCTTTGCTCTaGTGGCTTTTGTCTGTGCTG +
Preference number: 2 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLIDALL*WLLSVL
Trigger: CAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTAT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
3UTR-3UTR CCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATAATCGGCACGGGCTGTaGCCTCCCGCGCAGGCTGCG +
Preference number: 2 (lower is better)
Translates to: TEREEEAIKYILSVHVFHNRHGL*PPAQAA
Trigger: CGCAGCCTGCGCGGGAGGCCACAGCCCGTGCCGATT...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
3UTR-3UTR TCA 90 bp CTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGCTGCTCCCTGGTTTTGGCCTaGAACCATATTGGAAACCTT +
Preference number: 2 (lower is better)
Translates to: LDACSLDACILTPPSLSCSLVLA*NHIGNL
Trigger: AAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGA...GCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR-3UTR GCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATAGACGCTTTGCTCTaGTGGCTTTTGTCTGTGCTG +
Preference number: 2 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLIDALL*WLLSVL
Trigger: CAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTAT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
3UTR-3UTR GCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATAGACGCTTTGCTCTaGTGGCTTTTGTCTGTGCTG +
Preference number: 2 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLIDALL*WLLSVL
Trigger: CAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTAT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
3UTR-3UTR GCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAGCCTCCCGCGCAGGCTaGGGTAAGGCTATGGCACTG +
Preference number: 2 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSASRAG*GKAMAL
Trigger: CAGTGCCATAGCCTTACCGCAGCCTGCGCGGGAGGC...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
3UTR-3UTR GCA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGACTGGGTCACTGCTTTaGTTTCTCCAAAGTCATCTC +
Preference number: 2 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLTGSLL*FLQSHL
Trigger: GAGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGT...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR-3UTR TCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCGTAAGGCTATGGCACTaGGCGAGCAGCCACGCTCCT +
Preference number: 2 (lower is better)
Translates to: NLPWFWPETILETFINHIVRLWH*ASSHAP
Trigger: AGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTAC...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
3UTR-3UTR TCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGGTAAGGCTATGGCACTaGGCGAGCAGCCACGCTCCT +
Preference number: 2 (lower is better)
Translates to: RTNIAHLILLTAENSKLMVRLWH*ASSHAP
Trigger: AGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTAC...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
3UTR-3UTR GCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCGCCTCCCGCGCAGGCTaGGGTAAGGCTATGGCACTG +
Preference number: 2 (lower is better)
Translates to: YTEREEEAIKYILSVHVFASRAG*GKAMAL
Trigger: CAGTGCCATAGCCTTACCGCAGCCTGCGCGGGAGGC...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
3UTR-3UTR GCA 90 bp ATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTCATGCTTGGGAAGACTaGTCACGGCCCCTTCTAAAT +
Preference number: 2 (lower is better)
Translates to: MCLVTGSLLCFLQSHLCSHAWED*SRPLLN
Trigger: ATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATG...ACTGCAGAGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR-3UTR TCA 90 bp TGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTGGATGTCTTGAAACTTaGACAGTGACCATGTCTAAT +
Preference number: 2 (lower is better)
Translates to: CFAFSKVISAVLQARPWLGCLET*TVTMSN
Trigger: ATTAGACATGGTCACTGTTCAAGTTTCAAGACATCC...AAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR-3UTR TCA 90 bp CTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACACAAATATTGCCCATTTaGTTCTGCTCACTGCAGAGA +
Preference number: 2 (lower is better)
Translates to: LDHAWEDCSRPLLNSAVTQILPI*FCSLQR
Trigger: TCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTG...TGTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR-3UTR CCA 90 bp AAGACTGGGAATACCTCGCTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTTTCTTCCAGTTATTaGCTATGGGTACCCAAGGGT +
Preference number: 2 (lower is better)
Translates to: KTGNTSLTSNVPGHWVTAFSSSY*LWVPKG
Trigger: ACCCTTGGGTACCCATAGCCAATAACTGGAAGAAAA...AGCAGTGACCCAGTGACCAGGCACATTACTCGTGAGCGAGGTATTCCCAGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR-3UTR TCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCGTAAGGCTATGGCACTaGGCGAGCAGCCACGCTCCT +
Preference number: 2 (lower is better)
Translates to: YTEREEEAIKYILSVHVFVRLWH*ASSHAP
Trigger: AGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTAC...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
3UTR-3UTR TCA 90 bp ATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTTCCCTGGTTTTGGCCTaGAACCATATTGGAAACCTT +
Preference number: 2 (lower is better)
Translates to: MCLVTGSLLCFLQSHLCSSLVLA*NHIGNL
Trigger: AAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGA...ACTGCAGAGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR-3UTR TCA 90 bp AAGACTGGGAATACCTCGCTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGAAACTTGAACAGTaGCCATGTCTAATGCTGACA +
Preference number: 2 (lower is better)
Translates to: KTGNTSLTSNVPGHWVTALKLEQ*PCLMLT
Trigger: TGTCAGCATTAGACATGGTCACTGTTCAAGTTTCAA...AGCAGTGACCCAGTGACCAGGCACATTACTCGTGAGCGAGGTATTCCCAGTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR-3UTR TCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGACGCTAATGCTCAAATaGAGAGGTCCTCTCCAGACA +
Preference number: 2 (lower is better)
Translates to: PRTNIAHLILLTAENSKLTLMLK*RGPLQT
Trigger: TGTCTGGAGAGGACCTCTTCATTTGAGCATTAGCGT...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
3UTR-3UTR GCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCATAGACGCTTTGCTCTaGTGGCTTTTGTCTGTGCTG +
Preference number: 2 (lower is better)
Translates to: NLPWFWPETILETFINHIIDALL*WLLSVL
Trigger: CAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTAT...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
3UTR-3UTR GCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGTCACAGAACAAACGGTaGTATCACAGATTCACAAGA +
Preference number: 2 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWSQNKR*YHRFTR
Trigger: TCTTGTGAATCTGTGATAGCACCGTTTGTTCTGTGA...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
3UTR-3UTR TCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATACGCTAATGCTCAAATaGAGAGGTCCTCTCCAGACA +
Preference number: 2 (lower is better)
Translates to: TEREEEAIKYILSVHVFHTLMLK*RGPLQT
Trigger: TGTCTGGAGAGGACCTCTTCATTTGAGCATTAGCGT...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
3UTR-3UTR CCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCATCCAGTTATTGGCTATaGGTACCCAAGGGTATGTTT +
Preference number: 2 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSSSYWL*VPKGMF
Trigger: AAACATACCCTTGGGTACCCATAGCCAATAACTGGA...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
3UTR-3UTR TCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAACTGAGGAAACCCCATaGAGTATAGACGCTTTGCTC +
Preference number: 2 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKTEETP*SIDALL
Trigger: GAGCAAAGCGTCTATACTTCATGGGGTTTCCTCAGT...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
3UTR-3UTR CCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATTTTTCTTCCAGTTATTaGCTATGGGTACCCAAGGGT +
Preference number: 2 (lower is better)
Translates to: TEREEEAIKYILSVHVFHFSSSY*LWVPKG
Trigger: ACCCTTGGGTACCCATAGCCAATAACTGGAAGAAAA...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
3UTR-3UTR GCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATTCACAGAACAAACGGTaGTATCACAGATTCACAAGA +
Preference number: 2 (lower is better)
Translates to: TEREEEAIKYILSVHVFHSQNKR*YHRFTR
Trigger: TCTTGTGAATCTGTGATAGCACCGTTTGTTCTGTGA...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
3UTR-3UTR CCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCACACCCATGATAATATaGAGGGATCCGGTAAGTAGT +
Preference number: 2 (lower is better)
Translates to: YTEREEEAIKYILSVHVFTPMII*RDPVSS
Trigger: ACTACTTACCGGATCCCTCCATATTATCATGGGTGT...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
3UTR GCA 72 bp CTGGAATCGGCACGGGCTGTGGCCTCCCGCGCAGGCTaGGGTAAGGCTATGGCACTGAGCGAGCAGCCACGC +
Preference number: 3 (lower is better)
Translates to: LESARAVASRAG*GKAMALSEQPR
Trigger: GCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCCTGCGCGGGAGGCCACAGCCCGTGCCGATTCCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
3UTR TCA 72 bp TGGCCTCCCGCGCAGGCTGCGGTAAGGCTATGGCACTaGGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTC +
Preference number: 3 (lower is better)
Translates to: WPPAQAAVRLWH*ASSHAPACLSL
Trigger: GAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCCTGCGCGGGAGGCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
3UTR CCA 72 bp GAGGTCTTGGCTGAGGGACCAGGAGCTCAGGTGCAGTaGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTG +
Preference number: 3 (lower is better)
Translates to: EVLAEGPGAQVQ*GTFSSLQAETV
Trigger: CACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCCCTCAGCCAAGACCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR-3UTR CAA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGATTTTCTTCCAGTTATaGGCTATGGGTACCCAAGGG +
Preference number: 3 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVIFFQL*AMGTQG
Trigger: CCCTTGGGTACCCATAGCCAATAACTGGAAGAAAAT...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
3UTR GCA 72 bp GGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTaGTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC +
Preference number: 3 (lower is better)
Translates to: GKAMALSEQPRS*LSLSLSLSLSL
Trigger: GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
3UTR CCA 72 bp TCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTaGCTTCTTGATGCCTGTTCCCTGGATGCATGCATC +
Preference number: 3 (lower is better)
Translates to: SKVISAVLQARP*LLDACSLDACI
Trigger: GATGCATGCATCCAGGGAACAGGCATCAAGAAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR GCA 72 bp TTGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTaGCAACCACAACCGCAGGCACACGTTAACACGGGG +
Preference number: 3 (lower is better)
Translates to: LSHYSRRATTRG*QPQPQAHVNTG
Trigger: CCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
3UTR GCA 72 bp GTCACTGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTaGTCCAGGCACGGCCCTGGCTTCTTGATGCCTGTT +
Preference number: 3 (lower is better)
Translates to: VTALLSPKSSLQ*SRHGPGFLMPV
Trigger: AACAGGCATCAAGAAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGCAGTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR GCA 72 bp GCAGGAAGACTGGGAATACCTCGCTCACGAGTAATGTaGCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAA +
Preference number: 3 (lower is better)
Translates to: AGRLGIPRSRVM*LVTGSLLCFLQ
Trigger: TTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAGCGAGGTATTCCCAGTCTTCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR-3UTR CAA 90 bp GCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCACAAATATTGCCCATTaGATTCTGCTCACTGCAGAG +
Preference number: 3 (lower is better)
Translates to: ALLSPKSSLQCSRHGPGFTNIAH*ILLTAE
Trigger: CTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGT...GAAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR TCA 72 bp ACTCCTCAACAGCCAAAGGGCACTGAGGAAACCCCATaGAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCT +
Preference number: 3 (lower is better)
Translates to: TPQQPKGTEETP*SIDALLCWLLS
Trigger: AGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCCTCAGTGCCCTTTGGCTGTTGAGGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
3UTR GCA 72 bp TGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTaGAGTGACAGAAGAAAGGCTTGTCTCATTACAGTA +
Preference number: 3 (lower is better)
Translates to: CLGRLLTAPSKF*SDRRKACLITV
Trigger: TACTGTAATGAGACAAGCCTTTCTTCTGTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR-3UTR CAA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGTGGCCTGAAACCATATaGGAAACCTTCATCAACCAC +
Preference number: 3 (lower is better)
Translates to: PRTNIAHLILLTAENSKLWPETI*ETFINH
Trigger: GTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCA...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGTGCGCAGGTGGCGGATaGGCGCGGCCTTGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVCAGGG*ARPCRR
Trigger: CCGCCGACAAGGCCGCGCTCATCCGCCACCTGCGCA...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGAGCTCCGCCCGCGGCTaGTGCAGGGAGAGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVSSARG*CRESRV
Trigger: CACGCGGCTCTCCCTGCAGCAGCCGCGGGCGGAGCT...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGGGGCAGGGAGAGGGCTaGTCGCTGCTCCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVGQGEG*SLLPAS
Trigger: GGAGGCGGGGAGCAGCGAGCAGCCCTCTCCCTGCCC...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CTGAGGGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGGCCGCGGCCGCAGTaGGTGCGCATGTGGATGCGC +
Preference number: 4 (lower is better)
Translates to: LRDQELRCSGVHSPPCRRRPRPQ*VRMWMR
Trigger: GCGCATCCACATGCGCACGCACTGCGGCCGCGGCCT...CCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCCCTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCGGGCAGGGAGAGGGCTaGTCGCTGCTCCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLGQGEG*SLLPAS
Trigger: GGAGGCGGGGAGCAGCGAGCAGCCCTCTCCCTGCCC...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCGCGGGGGCGTGGAGGTaGCCACCACCGTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLAGAWR*PPPSVV
Trigger: CACCACGGACGGTGGTGGCCACCTCCACGCCCCCGC...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGGTGGCCGCGTGGGGCTaGGTCCCGGACTTGGACTGC +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVVAAWG*VPDLDC
Trigger: GCAGTCCAAGTCCGGGACCCAGCCCCACGCGGCCAC...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCCCGTGCGCCTTCCGGTaGCGGCTCAGGGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLPCAFR*RLRVPR
Trigger: CCTGGGCACCCTGAGCCGCCACCGGAAGGCGCACGG...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCCGCGGCCGCAGTGCGTaGGCATGTGGATGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLRGRSA*ACGCAG
Trigger: CCCTGCGCATCCACATGCGCACGCACTGCGGCCGCG...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGTGCACTCGAAGGGCTTaGGGCCCTTGTGGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVCTRRA*GPCGPR
Trigger: GCGGGGGCCACAAGGGCCGCAAGCCCTTCGAGTGCA...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGTTCGCCCGCGGCGGCTaGAGTCTCCGCATCCGACTG +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVFARGG*SLRIRL
Trigger: CAGTCGGATGCGGAGACTGCAGCCGCCGCGGGCGAA...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCGCAGGCGAGCTTCTaGTCCTGCGAGGCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLSQASF*SCEAAP
Trigger: GGGCGCGGCCTCGCAGGAGCAGAAGCTCGCCTGCGA...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCGGCGAGATGCCCAGGTaGGAGCGCACGTGGGCACGC +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLGEMPR*ERTWAR
Trigger: GCGTGCCCACGTGCGCTCCCACCTGGGCATCTCGCC...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCGGGAGAGGCAGCCTCTaGGCTGCTGGCTGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLGRGSL*AAGWSG
Trigger: CCCGCTCCAGCCAGCAGCCCAGAGGCTGCCTCTCCC...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCCTGGGCCCTGCTCGGTaGGAGAGGCAGCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLLGPAR*ERQPLG
Trigger: GCCCAGAGGCTGCCTCTCCCACCGAGCAGGGCCCAG...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCCGGCGGGGGCAGGCCTaGCGTCTTTGGTGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLRRGQA*RLWCAA
Trigger: TGCAGCACACCAAAGACGTCAGGCCTGCCCCCGCCG...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCGCCACTCAGGAGGGCTaGGCTGCCCACGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGATQEG*AAHEWR
Trigger: CCTCCACTCGTGGGCAGCTCAGCCCTCCTGAGTGGC...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGCCTTCCGGCTCCGGGTaGCAGCCATGTGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVPSGSG*QPCGCW
Trigger: CCAGCAACCACATGGCTGTCACCCGGAGCCGGAAGG...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGTGCTTGAAGATCGCCTaGAGTGGGGCGGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVCLKIA*SGAAGA
Trigger: GGCCCCTGCCGCCCCACTGCAGGCGATCTTCAAGCA...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTAGCTCCGCCCGCGGCTaGTGCAGGGAGAGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSSSARG*CRESRV
Trigger: CACGCGGCTCTCCCTGCAGCAGCCGCGGGCGGAGCT...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGGTTACTGCCAGTGCTTaGGGGCCCTGGGTCCGCCAC +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVVTASA*GPWVRH
Trigger: GTGGCGGACCCAGGGCCCGCAAGCACTGGCAGTAAC...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCCCCTCTTCTTCGACGTaGCCGCTGGGCCCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLPSSST*PLGPAR
Trigger: CCGAGCAGGGCCCAGCGGGCACGTCGAAGAAGAGGG...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCCCGTGCTCTTCCCGGTaGACCGGCGAGGCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGPCSSR*TGEAVS
Trigger: GGAAACGGCCTCGCCGGTGCACCGGGAAGAGCACGG...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGGCCAGGAAGCCCTTCTaGTCCAGGGCGTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVARKPF*SRASPG
Trigger: GCCTGGTGACGCCCTGGACCAGAAGGGCTTCCTGGC...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCCCCGGGGAAGCCTGCTaGGCGTTGATGAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLPGEAC*ALMRGG
Trigger: CCCGCCTCTCATCAACGCCCAGCAGGCTTCCCCGGG...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCGAGCTTCAGGGGCGGTaGCGGCAGGCTGGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLELQGR*RQAGAD
Trigger: ATCAGCCCCAGCCTGCCGCCACCGCCCCTGAAGCTC...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCGCAGCAGGTGGGCGTTaGAGGCCGCCTCCACTGAGC +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLAAGGR*RPPPLS
Trigger: GCTCAGTGGAGGCGGCCTCCAACGCCCACCTGCTGC...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCCGGGGGTGGCGGTGGTaGCGGCTTTGGGGACAGAAC +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLRGWRW*RLWGQN
Trigger: GTTCTGTCCCCAAAGCCGCCACCACCGCCACCCCCG...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCCGGGGGTGGCGGTGGTaGCGGCTTTGGGGACAGAAC +
Preference number: 4 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGRGWRW*RLWGQN
Trigger: GTTCTGTCCCCAAAGCCGCCACCACCGCCACCCCCG...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCCACCCCGCCGCTGTTaGCGCGGGGTCGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSPPRRC*RGVGSS
Trigger: TGAGGAGCCGACCCCGCGCCAACAGCGGCGGGGTGG...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCGGCCGCCGGGCTCTCTaGGTTAAGGTCACCCTGGCC +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLGRRAL*VKVTLA
Trigger: GGCCAGGGTGACCTTAACCCAGAGAGCCCGGCGGCC...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CTGAGGGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGGTGGCCAGGATTGGGTaGGCAGGCCTCTTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: LRDQELRCSGVHSPPCRRVARIG*AGLLLR
Trigger: GCGCAGCAAGAGGCCTGCCCACCCAATCCTGGCCAC...CCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCCCTCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGGCAGCAGGGCCTCGATaGTGCTGTCCTGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVAAGPR*CCPAPA
Trigger: AGCTGGAGCAGGACAGCATCATCGAGGCCCTGCTGC...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGCCTTGCGGGTGGCCTTaGGGTGCTTCTTGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVPCGWP*GASCAG
Trigger: ACCTGCGCAAGAAGCACCTCAAGGCCACCCGCAAGG...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGGCTGCTGACCAGGGCTaGGGAGTAGATTGGGACCGC +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVAADQG*GVDWDR
Trigger: GCGGTCCCAATCTACTCCTCAGCCCTGGTCAGCAGC...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCCCTTCCGGCTCCGGGTaGCAGCCATGTGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLPSGSG*QPCGCW
Trigger: CCAGCAACCACATGGCTGTCACCCGGAGCCGGAAGG...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTGGGGACGTGTTACTaGGCGGCCGCGGCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLLGTCY*AAAAAA
Trigger: CGCCGCCGCCGCGGCCGCTCAGTAACACGTCCCCAG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379933.7
CDS-3UTR TCA 90 bp GGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACACTTGGCTCCCTGGCATaGTGCGTTGGGGACCGGTGG +
Preference number: 4 (lower is better)
Translates to: GPGAQVQWGTFSSLQAETLGSLA*CVGDRW
Trigger: CCACCGGTCCCCAACGCATCATGCCAGGGAGCCAAG...TGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR GCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCCAGCCCGGGGAAGCCTaGTGGGCGTTGATGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLQPGEA*WALMRG
Trigger: GCCTCTCATCAACGCCCAGCAGGCTTCCCCGGGCTG...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACACGGGTGGCCTTGAGGTaGTTCTTGCGCAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: GPGAQVQWGTFSSLQAETRVALR*FLRRCR
Trigger: GCGGCACCTGCGCAAGAAGCACCTCAAGGCCACCCG...TGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCCGGCGCTGCACTCCTTaGACTCGAAGGGCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLRRCTP*TRRACG
Trigger: GCCGCAAGCCCTTCGAGTGCAAGGAGTGCAGCGCCG...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGGCAGGGAGAGGGCTaGTCGCTGCTCCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSGQGEG*SLLPAS
Trigger: GGAGGCGGGGAGCAGCGAGCAGCCCTCTCCCTGCCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGGGGCAGGGAGAGGGCTaGTCGCTGCTCCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLGQGEG*SLLPAS
Trigger: GGAGGCGGGGAGCAGCGAGCAGCCCTCTCCCTGCCC...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCGCCAGGAAGCCCTTCTaGTCCAGGGCGTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGARKPF*SRASPG
Trigger: GCCTGGTGACGCCCTGGACCAGAAGGGCTTCCTGGC...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGACAGGCTCAGCAGGTTaGTGCAGCCGGGGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVTGSAG*CSRGPE
Trigger: CTCAGGACCCCGGCTGCACCAACCTGCTGAGCCTGT...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp CTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGCTGCGCGGGGGCGTGGAGGTaGCCACCACCGTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: LDACSLDACILTPPSLSCAGAWR*PPPSVV
Trigger: CACCACGGACGGTGGTGGCCACCTCCACGCCCCCGC...GCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTTGGACTGCAGCAGGTaGGCGTTGGAGGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLLDCSR*ALEAAS
Trigger: GGAGGCGGCCTCCAACGCCCACCTGCTGCAGTCCAA...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp CTGAGGGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGGAGGTGGAGGCTGGGTaGGGCCCCTGTGAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: LRDQELRCSGVHSPPCRREVEAG*GPCEES
Trigger: GCTTTCTTCACAGGGGCCCCACCCAGCCTCCACCTC...CCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACATGGCAAACTCCCCGCTaGAGTCCAGGTCCACCCCGC +
Preference number: 4 (lower is better)
Translates to: GPGAQVQWGTFSSLQAETWQTPR*SPGPPR
Trigger: GCGGGGTGGACCTGGACTCCAGCGGGGAGTTTGCCA...TGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTGGCAAACTCCCCGCTaGAGTCCAGGTCCACCCCGC +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLWQTPR*SPGPPR
Trigger: GCGGGGTGGACCTGGACTCCAGCGGGGAGTTTGCCA...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCGTGGCCAGGATTGGGTaGGCAGGCCTCTTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLVARIG*AGLLLR
Trigger: GCGCAGCAAGAGGCCTGCCCACCCAATCCTGGCCAC...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CTGAGGGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGTCCATCCCCACGAGCTaGGAGGCGCCATCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: LRDQELRCSGVHSPPCRRSIPTS*EAPSAV
Trigger: CACAGCTGATGGCGCCTCCCAGCTCGTGGGGATGGA...CCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCCCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTGCATCCCCTGCGACCTaGCGGAGCTCAGTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSASPAT*RSSVAP
Trigger: GGGCGCCACTGAGCTCCGCCAGGTCGCAGGGGATGC...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCGTGCGCCTTCCGGTaGCGGCTCAGGGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLPCAFR*RLRVPR
Trigger: CCTGGGCACCCTGAGCCGCCACCGGAAGGCGCACGG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCGGCGGGGGCAGGCCTaGCGTCTTTGGTGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSRRGQA*RLWCAA
Trigger: TGCAGCACACCAAAGACGTCAGGCCTGCCCCCGCCG...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCGGCAGGCTGGGGCTaGTACAGCCCGGGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSAAGWG*YSPGKP
Trigger: AGGCTTCCCCGGGCTGTATCAGCCCCAGCCTGCCGC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCCCGGCCACCTCATCCTaGGTGTTGTCCTCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLPATSS*VLSSAV
Trigger: GACAGCGGAGGACAACACTCAGGATGAGGTGGCCGG...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACATGTGCTGAGGGGGACTaGGGCTGTCACTCCATCCCC +
Preference number: 4 (lower is better)
Translates to: GPGAQVQWGTFSSLQAETCAEGD*GCHSIP
Trigger: GGGGATGGAGTGACAGCCTCAGTCCCCCTCAGCACA...TGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGTCACTCCACCCTCTCTaGGCTGCTCCTGGACCATGC +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVSLHPL*AAPGPC
Trigger: GCATGGTCCAGGAGCAGCTCAGAGAGGGTGGAGTGA...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCCCCACGCCCGTaGTCTTCCCGGTGCACCGGC +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLLSPRP*SSRCTG
Trigger: GCCGGTGCACCGGGAAGAGCACGGGCGTGGGGAGAG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCCTCTCCCCACGCCCGTaGTCTTCCCGGTGCACCGGC +
Preference number: 4 (lower is better)
Translates to: ALLSPKSSLQCSRHGPGFLSPRP*SSRCTG
Trigger: GCCGGTGCACCGGGAAGAGCACGGGCGTGGGGAGAG...GAAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGGTCCAGGCTCTGGTTaGTCGACGCGTCCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: GPGAQVQWGTFSSLQAETGPGSG*STRPLP
Trigger: CGGAAGAGGACGCGTCGAGCAACCAGAGCCTGGACC...TGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCCCGGGGAAGCCTGCTaGGCGTTGATGAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSPGEAC*ALMRGG
Trigger: CCCGCCTCTCATCAACGCCCAGCAGGCTTCCCCGGG...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGGCCGCGTGGGGCTaGGTCCCGGACTTGGACTGC +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSVAAWG*VPDLDC
Trigger: GCAGTCCAAGTCCGGGACCCAGCCCCACGCGGCCAC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGCCGCGTGGCCGCGTaGGGCTGGGTCCCGGACTTG +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLSRVAA*GWVPDL
Trigger: CAAGTCCGGGACCCAGCCCCACGCGGCCACGCGGCT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGCGAGATGCCCAGGTaGGAGCGCACGTGGGCACGC +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSGEMPR*ERTWAR
Trigger: GCGTGCCCACGTGCGCTCCCACCTGGGCATCTCGCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGCGAGATGCCCAGGTaGGAGCGCACGTGGGCACGC +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLGEMPR*ERTWAR
Trigger: GCGTGCCCACGTGCGCTCCCACCTGGGCATCTCGCC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCCTCTGGGCTGCTGGCTaGAGCGGGAGGCTCACTAGA +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLLWAAG*SGRLTR
Trigger: TCTAGTGAGCCTCCCGCTCCAGCCAGCAGCCCAGAG...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCACCCCGCCGCTGTTaGCGCGGGGTCGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLPPRRC*RGVGSS
Trigger: TGAGGAGCCGACCCCGCGCCAACAGCGGCGGGGTGG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTGGGCCCATGGTaGTCGGCAGGGGCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLSLGPW*SAGAPA
Trigger: GGCCGGAGCCCCTGCCGACCACCATGGGCCCAGTGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CTGAGGGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGTGGTGGATCCGCTGGTaGCGAACCAGGCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LRDQELRCSGVHSPPCRRWWIRW*RTRLCF
Trigger: GAAGCACAGCCTGGTTCGCCACCAGCGGATCCACCA...CCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCAGTCCTTGGTGGCACTaGCCAAGCCCTCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLSPWWH*PSPPSG
Trigger: GCCGGAAGGAGGGCTTGGCCAGTGCCACCAAGGACT...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAATCGGCACGGGCTGTaGCCTCCCGCGCAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLNRHGL*PPAQAA
Trigger: CGCAGCCTGCGCGGGAGGCCACAGCCCGTGCCGATT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCCTGGCGGAGCTCAGTaGCGCCCTCCGACGGCTGCT +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSPGGAQ*RPPTAA
Trigger: AGCAGCCGTCGGAGGGCGCCACTGAGCTCCGCCAGG...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGCTCCTGGACCATGCTTaGGAAGACTGCTCACGGCCC +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVLLDHA*EDCSRP
Trigger: GGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGGAG...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCGGACCCCTGAGGTCTTaGCTGAGGGACCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGGPLRS*LRDQEL
Trigger: GAGCTCCTGGTCCCTCAGCCAAGACCTCAGGGGTCC...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCTCCGCAGATGCTGCATaGGTGGTCGGCTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGSADAA*VVGSSS
Trigger: ACTGGAGGAGCCGACCACTCATGCAGCATCTGCGGA...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp GGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACATCGCGGGGAGAACTGTaGGAGAACCGCCTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: GPGAQVQWGTFSSLQAETSRGEL*ENRLGK
Trigger: CTTCCCTAGGCGGTTCTCTCACAGTTCTCCCCGCGA...TGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCGCGGGGAGAACTGTaGGAGAACCGCCTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLSRGEL*ENRLGK
Trigger: CTTCCCTAGGCGGTTCTCTCACAGTTCTCCCCGCGA...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp AAGACTGGGAATACCTCGCTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTGCGCAGGTGGCGGATaGGCGCGGCCTTGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: KTGNTSLTSNVPGHWVTACAGGG*ARPCRR
Trigger: CCGCCGACAAGGCCGCGCTCATCCGCCACCTGCGCA...AGCAGTGACCCAGTGACCAGGCACATTACTCGTGAGCGAGGTATTCCCAGTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTGGGCACGATAGTGCTTaGGGTCCTCGCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSGHDSA*GPRRTA
Trigger: GGCTGTGCGGCGAGGACCTCAAGCACTATCGTGCCC...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCCACTCAGGAGGGCTaGGCTGCCCACGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLATQEG*AAHEWR
Trigger: CCTCCACTCGTGGGCAGCTCAGCCCTCCTGAGTGGC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp CTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGCTGCGCCACTCAGGAGGGCTaGGCTGCCCACGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LDACSLDACILTPPSLSCATQEG*AAHEWR
Trigger: CCTCCACTCGTGGGCAGCTCAGCCCTCCTGAGTGGC...GCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGGGCTGTGCTTCAAGGTaGAGGTTCGCTCGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVGCASR*RFARRS
Trigger: AGACCTGCGAGCGAACCTTCACCTTGAAGCACAGCC...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCCTCAGCCTCGTTCTCTaGGACGGCGTTGTTGCCGCT +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLLSLVL*DGVVAA
Trigger: AGCGGCAACAACGCCGTCTCAGAGAACGAGGCTGAG...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCGTAAGGCTATGGCACTaGGCGAGCAGCCACGCTCCT +
Preference number: 4 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGVRLWH*ASSHAP
Trigger: AGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTAC...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGCTGACGTCTTTGGTGTaGTGCAGGCCAAGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVLTSLV*CRPSKA
Trigger: GGCCTTGCTTGGCCTGCAGCACACCAAAGACGTCAG...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCGCGTGCGCATGTGGATaGGCAGGGCACGATAGTGCT +
Preference number: 4 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGACACG*AGHDSA
Trigger: AGCACTATCGTGCCCTGCGCATCCACATGCGCACGC...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp TGGCTTCTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGCGCGGCCGCAGTGCGTaGGCATGTGGATGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: WLLDACSLDACILTPPSLRGRSA*ACGCAG
Trigger: CCCTGCGCATCCACATGCGCACGCACTGCGGCCGCG...CAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAGAAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACATCGGGCACGTGCAGGTaGTGCTTGAGGATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: GPGAQVQWGTFSSLQAETSGTCR*CLRMWW
Trigger: CCACCACATCCTCAAGCAGCACCTGCACGTGCCCGA...TGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCTCTTCTTCGACGTaGCCGCTGGGCCCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLPSSST*PLGPAR
Trigger: CCGAGCAGGGCCCAGCGGGCACGTCGAAGAAGAGGG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCGGGCAGGCCTCTTGCTaGGCGGCTCCAGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: ALLSPKSSLQCSRHGPGFGQASC*AAPAGP
Trigger: AGGACCTGCTGGAGCCGCGCAGCAAGAGGCCTGCCC...GAAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTGGGCAGGCCTCTTGCTaGGCGGCTCCAGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSGQASC*AAPAGP
Trigger: AGGACCTGCTGGAGCCGCGCAGCAAGAGGCCTGCCC...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCGCCCGCGGCGGCTaGAGTCTCCGCATCCGACTG +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLFARGG*SLRIRL
Trigger: CAGTCGGATGCGGAGACTGCAGCCGCCGCGGGCGAA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTCCCCACGCCCGTaGTCTTCCCGGTGCACCGGC +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLLSPRP*SSRCTG
Trigger: GCCGGTGCACCGGGAAGAGCACGGGCGTGGGGAGAG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGTCGCAGGCGAGCTTCTaGTCCTGCGAGGCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRSQASF*SCEAAP
Trigger: GGGCGCGGCCTCGCAGGAGCAGAAGCTCGCCTGCGA...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGTCCTCTTGTCTGCCTTaGTGGCCACGCTTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVSSCLP*WPRFWG
Trigger: CCCCCAAAAGCGTGGCCAGCAAGGCAGACAAGAGGA...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTGGGGCTGAACCTGGCTaGGCCCAAACGTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSGAEPG*AQTWAG
Trigger: CCCTGCCCACGTTTGGGCCCAGCCAGGTTCAGCCCC...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCAGCTGCCCTCCTTATTaGGGGGCTGAACCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLSCPPY*GAEPGW
Trigger: CCAGCCAGGTTCAGCCCCCCAATAAGGAGGGCAGCT...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCGGGGGCGTGGAGGTaGCCACCACCGTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSAGAWR*PPPSVV
Trigger: CACCACGGACGGTGGTGGCCACCTCCACGCCCCCGC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTGAGCTTCAGGGGCGGTaGCGGCAGGCTGGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSELQGR*RQAGAD
Trigger: ATCAGCCCCAGCCTGCCGCCACCGCCCCTGAAGCTC...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTGGCCGCGTGGGGCTaGGTCCCGGACTTGGACTGC +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLVAAWG*VPDLDC
Trigger: GCAGTCCAAGTCCGGGACCCAGCCCCACGCGGCCAC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp CTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACAAGCCGCGTGGCCGCGTaGGGCTGGGTCCCGGACTTG +
Preference number: 4 (lower is better)
Translates to: LDHAWEDCSRPLLNSAVTSRVAA*GWVPDL
Trigger: CAAGTCCGGGACCCAGCCCCACGCGGCCACGCGGCT...TGTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTAGGTGGGAGCGCACGTaGGCACGCAAGACCCCCGAG +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSRWERT*ARKTPE
Trigger: CTCGGGGGTCTTGCGTGCCCACGTGCGCTCCCACCT...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGGTGGGAGCGCACGTaGGCACGCAAGACCCCCGAG +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLRWERT*ARKTPE
Trigger: CTCGGGGGTCTTGCGTGCCCACGTGCGCTCCCACCT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp CTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGCTGCAGGTGGGAGCGCACGTaGGCACGCAAGACCCCCGAG +
Preference number: 4 (lower is better)
Translates to: LDACSLDACILTPPSLSCRWERT*ARKTPE
Trigger: CTCGGGGGTCTTGCGTGCCCACGTGCGCTCCCACCT...GCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTGGATGCAGTTGCGCTTaGCCGCGAACGCGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSGCSCA*PRTRRC
Trigger: GCAGCGCCGCGTTCGCGGCCAAGCGCAACTGCATCC...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGGCTTGGGCCGCAGTaGACGCAGCAAGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSGLGPQ*TQQGCA
Trigger: GGCACAGCCTTGCTGCGTCCACTGCGGCCCAAGCCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAAGTGCTTGCGGGCCCTaGGTCCGCCACCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: GPGAQVQWGTFSSLQAETSACGP*VRHLGF
Trigger: AAAACCAAGGTGGCGGACCCAGGGCCCGCAAGCACT...TGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCGGGGGTGGCGGTGGTaGCGGCTTTGGGGACAGAAC +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSRGWRW*RLWGQN
Trigger: GTTCTGTCCCCAAAGCCGCCACCACCGCCACCCCCG...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGGAGAGGCAGCCTCTaGGCTGCTGGCTGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLGRGSL*AAGWSG
Trigger: CCCGCTCCAGCCAGCAGCCCAGAGGCTGCCTCTCCC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTGGGCCCTGCTCGGTaGGAGAGGCAGCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLLGPAR*ERQPLG
Trigger: GCCCAGAGGCTGCCTCTCCCACCGAGCAGGGCCCAG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTTCGACGTGCCCGCTaGGCCCTGCTCGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSLRRAR*ALLGGR
Trigger: TCTCCCACCGAGCAGGGCCCAGCGGGCACGTCGAAG...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACACCACCCCGCCGCTGTTaGCGCGGGGTCGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LDHAWEDCSRPLLNSAVTPPRRC*RGVGSS
Trigger: TGAGGAGCCGACCCCGCGCCAACAGCGGCGGGGTGG...TGTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTGGTGGATCCGCTGGTaGCGAACCAGGCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLWWIRW*RTRLCF
Trigger: GAAGCACAGCCTGGTTCGCCACCAGCGGATCCACCA...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTTCTGGTGGATCCGCTaGTGGCGAACCAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLFWWIR*WRTRLC
Trigger: GCACAGCCTGGTTCGCCACCAGCGGATCCACCAGAA...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTGCCTGGCTTTCTGGTaGATCCGCTGGTGGCGAACC +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLCLAFW*IRWWRT
Trigger: GGTTCGCCACCAGCGGATCCACCAGAAAGCCAGGCA...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCGCATGCCTGGCTTTCTaGTGGATCCGCTGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLACLAF*WIRWWR
Trigger: TCGCCACCAGCGGATCCACCAGAAAGCCAGGCATGC...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCAGCTGTGGCCAGGATTaGGTGGGCAGGCCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLSCGQD*VGRPLA
Trigger: AGCAAGAGGCCTGCCCACCCAATCCTGGCCACAGCT...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TGGCTTCTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAATCGGCACGGGCTGTaGCCTCCCGCGCAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: WLLDACSLDACILTPPSLNRHGL*PPAQAA
Trigger: CGCAGCCTGCGCGGGAGGCCACAGCCCGTGCCGATT...CAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAGAAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTGGCGGAGCTCAGTaGCGCCCTCCGACGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLPGGAQ*RPPTAA
Trigger: AGCAGCCGTCGGAGGGCGCCACTGAGCTCCGCCAGG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCTGTTCAGGGGCGGGCTaGGGCCCCTCCTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: ALLSPKSSLQCSRHGPGFCSGAG*GPSSAV
Trigger: CACTGCAGAGGAGGGGCCCCAGCCCGCCCCTGAACA...GAAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTTCAGGGGCGGGCTaGGGCCCCTCCTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSCSGAG*GPSSAV
Trigger: CACTGCAGAGGAGGGGCCCCAGCCCGCCCCTGAACA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTTGTTCAGGGGCGGGCTaGGGCCCCTCCTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSCSGAG*GPSSAV
Trigger: CACTGCAGAGGAGGGGCCCCAGCCCGCCCCTGAACA...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTGGACAAGCGCGTTGTaGCGCAGCAGTCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLWTSAL*RSSPRC
Trigger: ACATCGAGGACTGCTGCGTCACAACGCGCTTGTCCA...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCCGCCAGAGATGGGCTTaGCCACAATGCTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLRQRWA*PQCCCQ
Trigger: CTGACAGCAGCATTGTGGTCAAGCCCATCTCTGGCG...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACGCGGCAGGCTGGGGCTaGTACAGCCCGGGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDAAGWG*YSPGKP
Trigger: AGGCTTCCCCGGGCTGTATCAGCCCCAGCCTGCCGC...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTGGAGGCCGCCTCCACTaGGCCTTTGAGGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSGGRLH*AFEELQ
Trigger: CTGAAGCTCCTCAAAGGCTCAGTGGAGGCGGCCTCC...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTGCAGCAGGGCCTCGATaGTGCTGTCCTGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSAAGPR*CCPAPA
Trigger: AGCTGGAGCAGGACAGCATCATCGAGGCCCTGCTGC...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGCGCAGGTGGCGGATaGGCGCGGCCTTGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSCAGGG*ARPCRR
Trigger: CCGCCGACAAGGCCGCGCTCATCCGCCACCTGCGCA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTGGGCACGATAGTGCTTaGGGTCCTCGCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSGHDSA*GPRRTA
Trigger: GGCTGTGCGGCGAGGACCTCAAGCACTATCGTGCCC...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCGTTCCAGGAAGGCAGTaGGGGGCTTGCAGTCACCAA +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLVPGRQ*GACSHQ
Trigger: TTGGTGACTGCAAGCCCCTCACTGCCTTCCTGGAAC...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp TGGCTTCTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGATTGGGACCGCCAGCTaGACAGGGCCCTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: WLLDACSLDACILTPPSLIGTAS*TGPCRG
Trigger: GCCCCTGCAGGGCCCTGTTCAGCTGGCGGTCCCAAT...CAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAGAAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTGGGACCGCCAGCTaGACAGGGCCCTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLIGTAS*TGPCRG
Trigger: GCCCCTGCAGGGCCCTGTTCAGCTGGCGGTCCCAAT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGCCTTCCGGCTCCGGGTaGCAGCCATGTGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLPSGSG*QPCGCW
Trigger: CCAGCAACCACATGGCTGTCACCCGGAGCCGGAAGG...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTGCAGGCGGAGACAGTaGGGGAAGTCTATTGCCTGC +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLCRRRQ*GKSIAC
Trigger: GCAGGCAATAGACTTCCCTCACTGTCTCCGCCTGCA...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp CTGAGGGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGGTGACTTTCCGCAGATaGTGCATGAGTGGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: LRDQELRCSGVHSPPCRRVTFRR*CMSGRL
Trigger: GAGCCGACCACTCATGCAGCATCTGCGGAAAGTCAC...CCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGCTTGAAGATCGCCTaGAGTGGGGCGGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSCLKIA*SGAAGA
Trigger: GGCCCCTGCCGCCCCACTGCAGGCGATCTTCAAGCA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGCTCCGCCCGCGGCTaGTGCAGGGAGAGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSSSARG*CRESRV
Trigger: CACGCGGCTCTCCCTGCAGCAGCCGCGGGCGGAGCT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCGGGTGGCCTTGAGGTaGTTCTTGCGCAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSRVALR*FLRRCR
Trigger: GCGGCACCTGCGCAAGAAGCACCTCAAGGCCACCCG...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCGGCCGCAGTGCGTaGGCATGTGGATGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSRGRSA*ACGCAG
Trigger: CCCTGCGCATCCACATGCGCACGCACTGCGGCCGCG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACAGGCCGCGGCCGCAGTaGGTGCGCATGTGGATGCGC +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDRPRPQ*VRMWMR
Trigger: GCGCATCCACATGCGCACGCACTGCGGCCGCGGCCT...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCACTCGAAGGGCTTaGGGCCCTTGTGGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLCTRRA*GPCGPR
Trigger: GCGGGGGCCACAAGGGCCGCAAGCCCTTCGAGTGCA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCCGCGAACGCGGCGCTaGACTCCTTGCACTCGAAGG +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSPRTRR*TPCTRR
Trigger: CCTTCGAGTGCAAGGAGTGCAGCGCCGCGTTCGCGG...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGGCAGGGAGAGGGCTaGTCGCTGCTCCCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSGQGEG*SLLPAS
Trigger: GGAGGCGGGGAGCAGCGAGCAGCCCTCTCCCTGCCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACCCCTCTTCTTCGACGTaGCCGCTGGGCCCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: PGPCLGRLLTAPSKFCSDPSSST*PLGPAR
Trigger: CCGAGCAGGGCCCAGCGGGCACGTCGAAGAAGAGGG...GTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGTGGCGAACCAGGCTGTaGTTCAAGGTGAAGGTTCGC +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVWRTRL*FKVKVR
Trigger: GCGAACCTTCACCTTGAAGCACAGCCTGGTTCGCCA...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCGCCTCCCGCGCAGGCTaGGGTAAGGCTATGGCACTG +
Preference number: 4 (lower is better)
Translates to: ALLSPKSSLQCSRHGPGFASRAG*GKAMAL
Trigger: CAGTGCCATAGCCTTACCGCAGCCTGCGCGGGAGGC...GAAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCCTCCCGCGCAGGCTaGGGTAAGGCTATGGCACTG +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLASRAG*GKAMAL
Trigger: CAGTGCCATAGCCTTACCGCAGCCTGCGCGGGAGGC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCCTCCCGCGCAGGCTaGGGTAAGGCTATGGCACTG +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSASRAG*GKAMAL
Trigger: CAGTGCCATAGCCTTACCGCAGCCTGCGCGGGAGGC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTACACGGGGACCTGGGTaGGGCACAGGTCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSTRGPG*GTGLPG
Trigger: TCCTGGGAGACCTGTGCCGCACCCAGGTCCCCGTGT...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTTCCGCCGTGGCCTaGTCCACAGGCGCATCCCCT +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSVSAVA*STGASP
Trigger: AGGGGATGCGCCTGTGGAGCAGGCCACGGCGGAAAC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGCTGCGTTTCCGCCGTGGCCTaGTCCACAGGCGCATCCCCT +
Preference number: 4 (lower is better)
Translates to: LDACSLDACILTPPSLSCVSAVA*STGASP
Trigger: AGGGGATGCGCCTGTGGAGCAGGCCACGGCGGAAAC...GCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp CACAGCTGGGTAAGGCTTGGATTAGGCTTAGCAGGAAGACTGGGAATACCTCGCTCGCAGGCGAGCTTCTaGTCCTGCGAGGCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: HSWVRLGLGLAGRLGIPRSQASF*SCEAAP
Trigger: GGGCGCGGCCTCGCAGGAGCAGAAGCTCGCCTGCGA...GCGAGGTATTCCCAGTCTTCCTGCTAAGCCTAATCCAAGCCTTACCCAGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGGGAGCGCATGTaGCGGGTCAGGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSVWERM*RVRSCS
Trigger: GCTGCAGGACCTGACCCGGCACATGCGCTCCCACAC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCATCACGTGTTGCTCCTaGGAGTCTCCTGGGGACGTG +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLITCCS*ESPGDV
Trigger: CACGTCCCCAGGAGACTCGCAGGAGCAACACGTGAT...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379933.7
CDS-3UTR CCA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCCCAGTGAGCAGAGCATaGGGAACGCCTTGTCACAGG +
Preference number: 4 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGPVSRA*GTPCHR
Trigger: CCTGTGACAAGGCGTTCCCCATGCTCTGCTCACTGG...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCACCAGGCAGGGGCGTaGCCTGCGGCTTTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSHQAGA*PAAFLD
Trigger: GTCAAGAAAAGCCGCAGGCCACGCCCCTGCCTGGTG...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGAAGATCGCCTGCAGTaGGGCGGCAGGGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLEDRLQ*GGRGLG
Trigger: TCCAAGGCCCCTGCCGCCCCACTGCAGGCGATCTTC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTGTGACCAGGGGCTTTaGCTTCAGAGGGGGCATGTG +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLCDQGL*LQRGHV
Trigger: CACATGCCCCCTCTGAAGCCAAAGCCCCTGGTCACA...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCGGGGAAGCCTGCTaGGCGTTGATGAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLPGEAC*ALMRGG
Trigger: CCCGCCTCTCATCAACGCCCAGCAGGCTTCCCCGGG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTGGACTGCAGCAGGTaGGCGTTGGAGGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSLDCSR*ALEAAS
Trigger: GGAGGCGGCCTCCAACGCCCACCTGCTGCAGTCCAA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCTGGGTCCCGGACTTaGACTGCAGCAGGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSAGSRT*TAAGGR
Trigger: ACGCCCACCTGCTGCAGTCCAAGTCCGGGACCCAGC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGGGATGCAGTTGCGCTTaGCCGCGAACGCGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRGCSCA*PRTRRC
Trigger: GCAGCGCCGCGTTCGCGGCCAAGCGCAACTGCATCC...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGATGCAGTTGCGCTTaGCCGCGAACGCGGCGCTGC +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLGCSCA*PRTRRC
Trigger: GCAGCGCCGCGTTCGCGGCCAAGCGCAACTGCATCC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGGCTTGGGCCGCAGTaGACGCAGCAAGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLGLGPQ*TQQGCA
Trigger: GGCACAGCCTTGCTGCGTCCACTGCGGCCCAAGCCC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGGGGCTTGGGCCGCAGTaGACGCAGCAAGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRGLGPQ*TQQGCA
Trigger: GGCACAGCCTTGCTGCGTCCACTGCGGCCCAAGCCC...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACGGGCTTGGGCCGCAGTaGACGCAGCAAGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PGPCLGRLLTAPSKFCSDGLGPQ*TQQGCA
Trigger: GGCACAGCCTTGCTGCGTCCACTGCGGCCCAAGCCC...GTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGGGGGTGGCGGTGGTaGCGGCTTTGGGGACAGAAC +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLRGWRW*RLWGQN
Trigger: GTTCTGTCCCCAAAGCCGCCACCACCGCCACCCCCG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGCGGGGGTGGCGGTaGTGGCGGCTTTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSQRGWR*WRLWGQ
Trigger: CTGTCCCCAAAGCCGCCACCACCGCCACCCCCGCTG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACACTCACTAGACTCTTTTaGGCTGGTGGTGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: GPGAQVQWGTFSSLQAETLTRLF*AGGGSG
Trigger: CCCGCTGCCACCACCAGCCCAAAAGAGTCTAGTGAG...TGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGGAGAGGCAGCCTCTaGGCTGCTGGCTGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSGRGSL*AAGWSG
Trigger: CCCGCTCCAGCCAGCAGCCCAGAGGCTGCCTCTCCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AAGACTGGGAATACCTCGCTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTCTGGGCCCTGCTCGGTaGGAGAGGCAGCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: KTGNTSLTSNVPGHWVTALGPAR*ERQPLG
Trigger: GCCCAGAGGCTGCCTCTCCCACCGAGCAGGGCCCAG...AGCAGTGACCCAGTGACCAGGCACATTACTCGTGAGCGAGGTATTCCCAGTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTCGACGTGCCCGCTaGGCCCTGCTCGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLLRRAR*ALLGGR
Trigger: TCTCCCACCGAGCAGGGCCCAGCGGGCACGTCGAAG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCACCCCGCCGCTGTTaGCGCGGGGTCGGCTCCTCA +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSPPRRC*RGVGSS
Trigger: TGAGGAGCCGACCCCGCGCCAACAGCGGCGGGGTGG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGTGGCAAACTCCCCGCTaGAGTCCAGGTCCACCCCGC +
Preference number: 4 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLWQTPR*SPGPPR
Trigger: GCGGGGTGGACCTGGACTCCAGCGGGGAGTTTGCCA...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp CACAGCTGGGTAAGGCTTGGATTAGGCTTAGCAGGAAGACTGGGAATACCTCGCTCACTGGGCCCATGGTaGTCGGCAGGGGCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: HSWVRLGLGLAGRLGIPRSLGPW*SAGAPA
Trigger: GGCCGGAGCCCCTGCCGACCACCATGGGCCCAGTGA...GCGAGGTATTCCCAGTCTTCCTGCTAAGCCTAATCCAAGCCTTACCCAGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTTCATCACTGGGCCCATaGTGGTCGGCAGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSSSLGP*WSAGAP
Trigger: CGGAGCCCCTGCCGACCACCATGGGCCCAGTGATGA...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGAAAACCCGGGGACAGTaGGGACAGGTGATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVKTRGQ*GQVIFC
Trigger: GCAGAAGATCACCTGTCCCCACTGTCCCCGGGTTTT...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CTGAGGGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGTGTTGCCGCTGTGGGTaGACTCATTCTCGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LRDQELRCSGVHSPPCRRCCRCG*THSRCP
Trigger: AGGACAGCGAGAATGAGTCCACCCACAGCGGCAACA...CCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCGCGTTGTTGCCGCTGTaGGTGGACTCATTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLALLPL*VDSFSL
Trigger: CAGCGAGAATGAGTCCACCCACAGCGGCAACAACGC...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCTGTGGTTGCTGGCATTaGGAGCCAGCTCAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGCGCWH*EPAQPR
Trigger: ACGAGGCTGAGCTGGCTCCCAATGCCAGCAACCACA...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGCCGCCGGGCTCTCTaGGTTAAGGTCACCCTGGCC +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLGRRAL*VKVTLA
Trigger: GGCCAGGGTGACCTTAACCCAGAGAGCCCGGCGGCC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCATCCCCTGCGACCTaGCGGAGCTCAGTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSASPAT*RSSVAP
Trigger: GGGCGCCACTGAGCTCCGCCAGGTCGCAGGGGATGC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGGCCGTTTCCGCCGTaGCCTGCTCCACAGGCGCAT +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSRPFPP*PAPQAH
Trigger: ATGCGCCTGTGGAGCAGGCCACGGCGGAAACGGCCT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGTGCGCCTTCCGGTaGCGGCTCAGGGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSPCAFR*RLRVPR
Trigger: CCTGGGCACCCTGAGCCGCCACCGGAAGGCGCACGG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCGTCCTTGGGCTCCTaGCGGCCGTGCGCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSSSLGS*RPCAFR
Trigger: CCGGAAGGCGCACGGCCGCCAGGAGCCCAAGGACGA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCCCTTCTCGTCCTTaGGCTCCTGGCGGCCGTGCG +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLLPSRP*APGGRA
Trigger: CGCACGGCCGCCAGGAGCCCAAGGACGAGAAGGGAG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCCAGCGGGCGAACTTaGCGTCATTGGGACAGGGGT +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLASGRT*RHWDRG
Trigger: ACCCCTGTCCCAATGACGTCAAGTTCGCCCGCTGGC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTGCCAGCGGGCGAACTTaGCGTCATTGGGACAGGGGT +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSASGRT*RHWDRG
Trigger: ACCCCTGTCCCAATGACGTCAAGTTCGCCCGCTGGC...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGCCCATTGGTGGTAAATaGCTGGCCACACACAGTGCA +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVPIGGK*LATHSA
Trigger: TGCACTGTGTGTGGCCAGTCATTTACCACCAATGGG...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTTGTGCAGAGCCAGTaGGCAGAGCATGGGGAACGC +
Preference number: 4 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSLVQSQ*AEHGER
Trigger: GCGTTCCCCATGCTCTGCTCACTGGCTCTGCACAAG...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp CACAGCTGGGTAAGGCTTGGATTAGGCTTAGCAGGAAGACTGGGAATACCTCGCCGGCGGGGGCAGGCCTaGCGTCTTTGGTGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: HSWVRLGLGLAGRLGIPRRRGQA*RLWCAA
Trigger: TGCAGCACACCAAAGACGTCAGGCCTGCCCCCGCCG...GCGAGGTATTCCCAGTCTTCCTGCTAAGCCTAATCCAAGCCTTACCCAGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCCACCGTCCGTGGTGTaGCCAGGGGCTTTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSPPSVV*PGALAS
Trigger: TGAAGCCAAAGCCCCTGGTCACACCACGGACGGTGG...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCAGCAGGGCCTCGATaGTGCTGTCCTGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSAAGPR*CCPAPA
Trigger: AGCTGGAGCAGGACAGCATCATCGAGGCCCTGCTGC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGGCACGATAGTGCTTaGGGTCCTCGCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLGHDSA*GPRRTA
Trigger: GGCTGTGCGGCGAGGACCTCAAGCACTATCGTGCCC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCTGCTGACCAGGGCTaGGGAGTAGATTGGGACCGC +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSAADQG*GVDWDR
Trigger: GCGGTCCCAATCTACTCCTCAGCCCTGGTCAGCAGC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTCAGCCTCGTTCTCTaGGACGGCGTTGTTGCCGCT +
Preference number: 4 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSLSLVL*DGVVAA
Trigger: AGCGGCAACAACGCCGTCTCAGAGAACGAGGCTGAG...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTGTCCCGTGAGGTaGGGTCTAGCACTTCGCCCG +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSLCPVR*GLALRP
Trigger: CGGGCGAAGTGCTAGACCTCACCTCACGGGACAGAG...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAACATGGGTCTGCTTGTaGAGAGCCAGTGAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: GPGAQVQWGTFSSLQAETTWVCL*RASEQS
Trigger: GCTCTGCTCACTGGCTCTGCACAAGCAGACCCATGT...TGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGAATTTGCTGGATGTCTaGCAGCTCGATGGCCGACTC +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVNLLDV*QLDGRL
Trigger: GAGTCGGCCATCGAGCTGGCAGACATCCAGCAAATT...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGCCCGGGGAAGCCTaGTGGGCGTTGATGAGAGGC +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLQPGEA*WALMRG
Trigger: GCCTCTCATCAACGCCCAGCAGGCTTCCCCGGGCTG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTCCCGGACTTGGACTaGAGCAGGTGGGCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLVPDLD*SRWALE
Trigger: CTCCAACGCCCACCTGCTGCAGTCCAAGTCCGGGAC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp CTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCAAGCTCCGCCCGCGGCTaGTGCAGGGAGAGCCGCGTG +
Preference number: 4 (lower is better)
Translates to: LTSNVPGHWVTALLSPKSSSARG*CRESRV
Trigger: CACGCGGCTCTCCCTGCAGCAGCCGCGGGCGGAGCT...TGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCAGGCAAACACCTGGTTaGAGAAGCGGCAGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLRQTPG*RSGRGR
Trigger: TCTACCCCTGCCGCTTCTGCAACCAGGTGTTTGCCT...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGGGTGGCCTTGAGGTaGTTCTTGCGCAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLRVALR*FLRRCR
Trigger: GCGGCACCTGCGCAAGAAGCACCTCAAGGCCACCCG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCGGCCGCAGTGCGTaGGCATGTGGATGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSRGRSA*ACGCAG
Trigger: CCCTGCGCATCCACATGCGCACGCACTGCGGCCGCG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGCACTCGAAGGGCTTaGGGCCCTTGTGGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSCTRRA*GPCGPR
Trigger: GCGGGGGCCACAAGGGCCGCAAGCCCTTCGAGTGCA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCGCGAACGCGGCGCTaGACTCCTTGCACTCGAAGG +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLPRTRR*TPCTRR
Trigger: CCTTCGAGTGCAAGGAGTGCAGCGCCGCGTTCGCGG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGGGCCAGGCCCTTCTaGGAGAAGTCCAGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLRARPF*EKSRGS
Trigger: TGAGCCCCTGGACTTCTCGCAGAAGGGCCTGGCCCT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGACGCAGCAAGGCTGTaGCACTCAGGAGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSDAARL*HSGGLS
Trigger: GCTCAGCCCTCCTGAGTGGCACAGCCTTGCTGCGTC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGGTTACTGCCAGTGCTTaGGGGCCCTGGGTCCGCCAC +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRVTASA*GPWVRH
Trigger: GTGGCGGACCCAGGGCCCGCAAGCACTGGCAGTAAC...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTGTCTTCTGGGGGACTaGCCTGCTCTTCATCACTGG +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLCLLGD*PALHHW
Trigger: CCAGTGATGAAGAGCAGGGCAGTCCCCCAGAAGACA...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CTGAGGGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGGGACAGGTGATCTTCTaGAGGCAGTTGGTGTACGAG +
Preference number: 4 (lower is better)
Translates to: LRDQELRCSGVHSPPCRRGQVIF*RQLVYE
Trigger: CTCGTACACCAACTGCCTGCAGAAGATCACCTGTCC...CCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGGGACAGGTGATCTTCTaGAGGCAGTTGGTGTACGAG +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVGQVIF*RQLVYE
Trigger: CTCGTACACCAACTGCCTGCAGAAGATCACCTGTCC...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCTGGCGAACCAGGCTGTaGTTCAAGGTGAAGGTTCGC +
Preference number: 4 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGWRTRL*FKVKVR
Trigger: GCGAACCTTCACCTTGAAGCACAGCCTGGTTCGCCA...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp CTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACAGGGCAGGCCTCTTGCTaGGCGGCTCCAGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: LDHAWEDCSRPLLNSAVTGQASC*AAPAGP
Trigger: AGGACCTGCTGGAGCCGCGCAGCAAGAGGCCTGCCC...TGTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACGGTGGGCAGGCCTCTTaGTGCGCGGCTCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDGGQAS*CAAPAG
Trigger: ACCTGCTGGAGCCGCGCAGCAAGAGGCCTGCCCACC...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACATTCGCCCGCGGCGGCTaGAGTCTCCGCATCCGACTG +
Preference number: 4 (lower is better)
Translates to: LDHAWEDCSRPLLNSAVTFARGG*SLRIRL
Trigger: CAGTCGGATGCGGAGACTGCAGCCGCCGCGGGCGAA...TGTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCGCCCTCCGACGGCTaGTCTCTGTCCCGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSAPSDG*SLSREV
Trigger: CACCTCACGGGACAGAGAGCAGCCGTCGGAGGGCGC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp TGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCACAGGCGCATCCCCTaGGACCTGGCGGAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: CFAFSKVISAVLQARPWLHRRIP*DLAELS
Trigger: ACTGAGCTCCGCCAGGTCGCAGGGGATGCGCCTGTG...AAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCACAGGCGCATCCCCTaGGACCTGGCGGAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLHRRIP*DLAELS
Trigger: ACTGAGCTCCGCCAGGTCGCAGGGGATGCGCCTGTG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACCCGTGCTCTTCCCGGTaGACCGGCGAGGCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDPCSSR*TGEAVS
Trigger: GGAAACGGCCTCGCCGGTGCACCGGGAAGAGCACGG...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTGGTCCAGGCTCTGGTTaGTCGACGCGTCCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSGPGSG*STRPLP
Trigger: CGGAAGAGGACGCGTCGAGCAACCAGAGCCTGGACC...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGCTGCGCCCCTCCTCTGCAGTaGTGGCGCCATCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: LDACSLDACILTPPSLSCAPPLQ*WRHLPS
Trigger: AGAAGGGAGATGGCGCCAGCACTGCAGAGGAGGGGC...GCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCCCCTCCTCTGCAGTaGTGGCGCCATCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLAPPLQ*WRHLPS
Trigger: AGAAGGGAGATGGCGCCAGCACTGCAGAGGAGGGGC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTTGCCGGGTCAGGTCCTaGAGCGACCAGAACCGCTTG +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSCRVRS*SDQNRL
Trigger: CAAGCGGTTCTGGTCGCTGCAGGACCTGACCCGGCA...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCCACCCTCTCTGAGCTaGTCCTGGACCATGCTTGGG +
Preference number: 4 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSPPSLS*SWTMLG
Trigger: CCCAAGCATGGTCCAGGAGCAGCTCAGAGAGGGTGG...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACACGCTCACGAGTAATGTaGCTGGTCACTGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: GPGAQVQWGTFSSLQAETRSRVM*LVTGSL
Trigger: CAGTGACCCAGTGACCAGGCACATTACTCGTGAGCG...TGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTGGCTGGGCCCAAACGTaGGCAGGGTCACACCTCAGA +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSGWAQT*AGSHLR
Trigger: TCTGAGGTGTGACCCTGCCCACGTTTGGGCCCAGCC...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGGGCTGAACCTGGCTaGGCCCAAACGTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSGAEPG*AQTWAG
Trigger: CCCTGCCCACGTTTGGGCCCAGCCAGGTTCAGCCCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp AAGACTGGGAATACCTCGCTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTGGGGCTGAACCTGGCTaGGCCCAAACGTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: KTGNTSLTSNVPGHWVTAGAEPG*AQTWAG
Trigger: CCCTGCCCACGTTTGGGCCCAGCCAGGTTCAGCCCC...AGCAGTGACCCAGTGACCAGGCACATTACTCGTGAGCGAGGTATTCCCAGTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGAATCCGATTTGGTCCTaGAGGCTTCGAGGGGGACTT +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVNPIWS*RLRGGL
Trigger: AAGTCCCCCTCGAAGCCTCCAGGACCAAATCGGATT...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCCAGATGCTGCATGAGTaGTCGGCTCCTCCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGQMLHE*SAPPVS
Trigger: AGACACTGGAGGAGCCGACCACTCATGCAGCATCTG...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACCAGGCAGGGGCGTaGCCTGCGGCTTTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSHQAGA*PAAFLD
Trigger: GTCAAGAAAAGCCGCAGGCCACGCCCCTGCCTGGTG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACAGGCTCAGCAGGTTaGTGCAGCCGGGGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSTGSAG*CSRGPE
Trigger: CTCAGGACCCCGGCTGCACCAACCTGCTGAGCCTGT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGATGCTGCTGTCAGGCTaGATGATGAAGCCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVMLLSG*MMKPFW
Trigger: CCAGAAGGGCTTCATCATCCAGCCTGACAGCAGCAT...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGGGCCACCACCGTCCGTaGTGTGACCAGGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRGHHRP*CDQGLW
Trigger: CCAAAGCCCCTGGTCACACCACGGACGGTGGTGGCC...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGCGGGGGCGTGGAGGTaGCCACCACCGTCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEAGAWR*PPPSVV
Trigger: CACCACGGACGGTGGTGGCCACCTCCACGCCCCCGC...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACGAGCTTCAGGGGCGGTaGCGGCAGGCTGGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDELQGR*RQAGAD
Trigger: ATCAGCCCCAGCCTGCCGCCACCGCCCCTGAAGCTC...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp CTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACAGCAGCAGGTGGGCGTTaGAGGCCGCCTCCACTGAGC +
Preference number: 4 (lower is better)
Translates to: LDHAWEDCSRPLLNSAVTAAGGR*RPPPLS
Trigger: GCTCAGTGGAGGCGGCCTCCAACGCCCACCTGCTGC...TGTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCAGCAGGTGGGCGTTaGAGGCCGCCTCCACTGAGC +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSAAGGR*RPPPLS
Trigger: GCTCAGTGGAGGCGGCCTCCAACGCCCACCTGCTGC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTGGGTCCCGGACTTaGACTGCAGCAGGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLAGSRT*TAAGGR
Trigger: ACGCCCACCTGCTGCAGTCCAAGTCCGGGACCCAGC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp TGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTGCTGGGTCCCGGACTTaGACTGCAGCAGGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: CFAFSKVISAVLQARPWLAGSRT*TAAGGR
Trigger: ACGCCCACCTGCTGCAGTCCAAGTCCGGGACCCAGC...AAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGGCCGCGTGGGGCTaGGTCCCGGACTTGGACTGC +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSVAAWG*VPDLDC
Trigger: GCAGTCCAAGTCCGGGACCCAGCCCCACGCGGCCAC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGAGCCGCGTGGCCGCGTaGGGCTGGGTCCCGGACTTG +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAESRVAA*GWVPDL
Trigger: CAAGTCCGGGACCCAGCCCCACGCGGCCACGCGGCT...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp CTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGCTGCAGAGCACCTTGCGCATaGCGGGCGTCTTCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: LDACSLDACILTPPSLSCRAPCA*RASSCR
Trigger: GCGGCAAGAAGACGCCCGCCATGCGCAAGGTGCTCT...GCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCGATGTTGCACTGGTATaGCGAGATGCCCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGDVALV*RDAQVG
Trigger: TCCCACCTGGGCATCTCGCCATACCAGTGCAACATC...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTGCTTGAGGATGTGGTaGATGCAGTTGCGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLCLRMW*MQLRLA
Trigger: GGCCAAGCGCAACTGCATCCACCACATCCTCAAGCA...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTGGCTTCGCTGGGAGTaGCCAAATCCTTGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLWLRWE*PNPCPL
Trigger: AAGGGGACAAGGATTTGGCCACTCCCAGCGAAGCCA...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCGGAGCAGGGGCCATaGGGCTTTCCAGGATTCCGC +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLPEQGP*GFPGFR
Trigger: GCGGAATCCTGGAAAGCCCCATGGCCCCTGCTCCGG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TGGCTTCTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGCCGGAGCAGGGGCCATaGGGCTTTCCAGGATTCCGC +
Preference number: 4 (lower is better)
Translates to: WLLDACSLDACILTPPSLPEQGP*GFPGFR
Trigger: GCGGAATCCTGGAAAGCCCCATGGCCCCTGCTCCGG...CAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAGAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACATGGTTTTCAGCAGGGTaGGGGCCGAGGATACAGATG +
Preference number: 4 (lower is better)
Translates to: GPGAQVQWGTFSSLQAETWFSAG*GPRIQM
Trigger: CATCTGTATCCTCGGCCCCCACCCTGCTGAAAACCA...TGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGAGCTGTCTGAAGCCGTaGTGTTACTGCCAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVSCLKP*CYCQCL
Trigger: CAAGCACTGGCAGTAACACCACGGCTTCAGACAGCT...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGACTCTTTTGGGCTGGTaGTGGCAGCGGGGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRTLLGW*WQRGWR
Trigger: CCGCCACCCCCGCTGCCACCACCAGCCCAAAAGAGT...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTACTCTTTTGGGCTGGTaGTGGCAGCGGGGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: CFAFSKVISAVLQARPWLTLLGW*WQRGWR
Trigger: CCGCCACCCCCGCTGCCACCACCAGCCCAAAAGAGT...AAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGGAGAGGCAGCCTCTaGGCTGCTGGCTGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSGRGSL*AAGWSG
Trigger: CCCGCTCCAGCCAGCAGCCCAGAGGCTGCCTCTCCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CACAGCTGGGTAAGGCTTGGATTAGGCTTAGCAGGAAGACTGGGAATACCTCGCCTTCGACGTGCCCGCTaGGCCCTGCTCGGTGGGAGA +
Preference number: 4 (lower is better)
Translates to: HSWVRLGLGLAGRLGIPRLRRAR*ALLGGR
Trigger: TCTCCCACCGAGCAGGGCCCAGCGGGCACGTCGAAG...GCGAGGTATTCCCAGTCTTCCTGCTAAGCCTAATCCAAGCCTTACCCAGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCACTGGGCCCATaGTGGTCGGCAGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLSSLGP*WSAGAP
Trigger: CGGAGCCCCTGCCGACCACCATGGGCCCAGTGATGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGTCTTCTGCAGGCAGTTaGTGTACGAGTTCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVSSAGS*CTSSAW
Trigger: CCAAGCGGAACTCGTACACCAACTGCCTGCAGAAGA...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCAAAACCCGGGGACAGTaGGGACAGGTGATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLKTRGQ*GQVIFC
Trigger: GCAGAAGATCACCTGTCCCCACTGTCCCCGGGTTTT...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCCCTTCCCGTGGTGTTTaGCATGCCTGGCTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLPSRGV*HAWLSG
Trigger: ACCAGAAAGCCAGGCATGCCAAACACCACGGGAAGG...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGCTGCAGTCCTTGGTGGCACTaGCCAAGCCCTCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: LDACSLDACILTPPSLSCSPWWH*PSPPSG
Trigger: GCCGGAAGGAGGGCTTGGCCAGTGCCACCAAGGACT...GCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp CTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGCTGCGGCTGCAGTCCTTGGTaGCACTGGCCAAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LDACSLDACILTPPSLSCGCSPW*HWPSPP
Trigger: AGGAGGGCTTGGCCAGTGCCACCAAGGACTGCAGCC...GCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGCTGCAGTCCTTGGTaGCACTGGCCAAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSGCSPW*HWPSPP
Trigger: AGGAGGGCTTGGCCAGTGCCACCAAGGACTGCAGCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGGTTAAGGTCACCCTaGCCAGGCTCAGACGGCCAC +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLGLRSP*PGSDGH
Trigger: GTGGCCGTCTGAGCCTGGCCAGGGTGACCTTAACCC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGGGGTTAAGGTCACCCTaGCCAGGCTCAGACGGCCAC +
Preference number: 4 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLGLRSP*PGSDGH
Trigger: GTGGCCGTCTGAGCCTGGCCAGGGTGACCTTAACCC...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAATCGGCACGGGCTGTaGCCTCCCGCGCAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSNRHGL*PPAQAA
Trigger: CGCAGCCTGCGCGGGAGGCCACAGCCCGTGCCGATT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTAACACGGGGACCTaGGTGCGGCACAGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLVNTGT*VRHRSP
Trigger: GGGAGACCTGTGCCGCACCCAGGTCCCCGTGTTAAC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTAACACGGGGACCTaGGTGCGGCACAGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSVNTGT*VRHRSP
Trigger: GGGAGACCTGTGCCGCACCCAGGTCCCCGTGTTAAC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTGGCGGAGCTCAGTaGCGCCCTCCGACGGCTGCT +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSPGGAQ*RPPTAA
Trigger: AGCAGCCGTCGGAGGGCGCCACTGAGCTCCGCCAGG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCGTCCTTGGGCTCCTaGCGGCCGTGCGCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSSSLGS*RPCAFR
Trigger: CCGGAAGGCGCACGGCCGCCAGGAGCCCAAGGACGA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACCTCCCTTCTCGTCCTTaGGCTCCTGGCGGCCGTGCG +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDLPSRP*APGGRA
Trigger: CGCACGGCCGCCAGGAGCCCAAGGACGAGAAGGGAG...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGCCTTTCCCCTGTGTaGGAGCGCATGTGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLGLSPV*ERMCRV
Trigger: GACCCGGCACATGCGCTCCCACACAGGGGAAAGGCC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGGGCCTTTCCCCTGTGTaGGAGCGCATGTGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRGLSPV*ERMCRV
Trigger: GACCCGGCACATGCGCTCCCACACAGGGGAAAGGCC...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGTCTCTGAGCTGCTCCTaGACCATGCTTGGGAAGACT +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVSLSCS*TMLGKT
Trigger: AGTCTTCCCAAGCATGGTCCAGGAGCAGCTCAGAGA...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGCAGCAGGCTGGCTaGGGACCCCTGAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLQQQAG*GPLRSW
Trigger: CCAAGACCTCAGGGGTCCCCAGCCAGCCTGCTGCTG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGTGCGTTGGGGACCGGTaGGCTTCAGGGAGAGACCGA +
Preference number: 4 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLCVGDR*ASGRDR
Trigger: TCGGTCTCTCCCTGAAGCCCACCGGTCCCCAACGCA...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGACGCTTGGCTCCCTaGCATGATGCGTTGGGGACC +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSGRLAP*HDALGT
Trigger: GGTCCCCAACGCATCATGCCAGGGAGCCAAGCGTCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR TCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTGACTCGGCATCGTaGCTCAGTTTCCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLSDSAS*LSFLLE
Trigger: CTCCAAGAGGAAACTGAGTCACGATGCCGAGTCAGA...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTTGTGCAGAGCCAGTaGGCAGAGCATGGGGAACGC +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSLVQSQ*AEHGER
Trigger: GCGTTCCCCATGCTCTGCTCACTGGCTCTGCACAAG...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGTTGAGTGTCTGGAGCTaGATTGCCTGGTTGTCATCC +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVLSVWS*IAWLSS
Trigger: GGATGACAACCAGGCAATTCAGCTCCAGACACTCAA...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGCCACCGTCCGTGGTGTaGCCAGGGGCTTTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRPPSVV*PGALAS
Trigger: TGAAGCCAAAGCCCCTGGTCACACCACGGACGGTGG...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp CCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACCCACCGTCCGTGGTGTaGCCAGGGGCTTTGGCTTCA +
Preference number: 4 (lower is better)
Translates to: PGPCLGRLLTAPSKFCSDPPSVV*PGALAS
Trigger: TGAAGCCAAAGCCCCTGGTCACACCACGGACGGTGG...GTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp ATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCGGCAGGCTGGGGCTaGTACAGCCCGGGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: MCLVTGSLLCFLQSHLCSAAGWG*YSPGKP
Trigger: AGGCTTCCCCGGGCTGTATCAGCCCCAGCCTGCCGC...ACTGCAGAGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGCCTCCACTGAGCCTTTaGGGAGCTTCAGGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRPPLSL*GASGAV
Trigger: CACCGCCCCTGAAGCTCCTCAAAGGCTCAGTGGAGG...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCCACTGAGCCTTTaGGGAGCTTCAGGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLPPLSL*GASGAV
Trigger: CACCGCCCCTGAAGCTCCTCAAAGGCTCAGTGGAGG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp TGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCCTTGCGGGTGGCCTTaGGGTGCTTCTTGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: CFAFSKVISAVLQARPWLPCGWP*GASCAG
Trigger: ACCTGCGCAAGAAGCACCTCAAGGCCACCCGCAAGG...AAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGGCGGGCTCCAACTTaGTCGAGACATGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSWRAPT*SRHGEV
Trigger: CACCTCCCCATGTCTCGATCAAGTTGGAGCCCGCCA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp TGGCTTCTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGGCTGCTGACCAGGGCTaGGGAGTAGATTGGGACCGC +
Preference number: 4 (lower is better)
Translates to: WLLDACSLDACILTPPSLAADQG*GVDWDR
Trigger: GCGGTCCCAATCTACTCCTCAGCCCTGGTCAGCAGC...CAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAGAAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGGCTGCTGACCAGGGCTaGGGAGTAGATTGGGACCGC +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRAADQG*GVDWDR
Trigger: GCGGTCCCAATCTACTCCTCAGCCCTGGTCAGCAGC...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCGGCCGAGGATACAGATaGGATGATCTGGGCAATGGA +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLGRGYR*DDLGNG
Trigger: TCCATTGCCCAGATCATCTCATCTGTATCCTCGGCC...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGTCTGCAGAAACGGACTaGACTTGTTGGTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVSAETD*TCWCLW
Trigger: CCACAGACACCAACAAGTTCAGTCCGTTTCTGCAGA...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCGGCCACCTCATCCTaGGTGTTGTCCTCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLPATSS*VLSSAV
Trigger: GACAGCGGAGGACAACACTCAGGATGAGGTGGCCGG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCAGCCTCGTTCTCTaGGACGGCGTTGTTGCCGCT +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSLSLVL*DGVVAA
Trigger: AGCGGCAACAACGCCGTCTCAGAGAACGAGGCTGAG...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACCCTTCCGGCTCCGGGTaGCAGCCATGTGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDPSGSG*QPCGCW
Trigger: CCAGCAACCACATGGCTGTCACCCGGAGCCGGAAGG...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp CTGAGGGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGACAGCCAAAGGGCACTaGGGAAACCCCATGAAGTAT +
Preference number: 4 (lower is better)
Translates to: LRDQELRCSGVHSPPCRRTAKGH*GNPMKY
Trigger: ATACTTCATGGGGTTTCCTCAGTGCCCTTTGGCTGT...CCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTAAGGCTATGGCACTaGGCGAGCAGCCACGCTCCT +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLVRLWH*ASSHAP
Trigger: AGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTAC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGGCCGCCACATGGGTCTaGTTGTGCAGAGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLAATWV*LCRASE
Trigger: CTCACTGGCTCTGCACAAGCAGACCCATGTGGCGGC...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCAATTTGCTGGATGTCTaGCAGCTCGATGGCCGACTC +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLNLLDV*QLDGRL
Trigger: GAGTCGGCCATCGAGCTGGCAGACATCCAGCAAATT...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp TGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTGTCCCGGACTTGGACTaGAGCAGGTGGGCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: CFAFSKVISAVLQARPWLVPDLD*SRWALE
Trigger: CTCCAACGCCCACCTGCTGCAGTCCAAGTCCGGGAC...AAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTCCCGGACTTGGACTaGAGCAGGTGGGCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLVPDLD*SRWALE
Trigger: CTCCAACGCCCACCTGCTGCAGTCCAAGTCCGGGAC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp TGGCTTCTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGGTCCCGGACTTGGACTaGAGCAGGTGGGCGTTGGAG +
Preference number: 4 (lower is better)
Translates to: WLLDACSLDACILTPPSLVPDLD*SRWALE
Trigger: CTCCAACGCCCACCTGCTGCAGTCCAAGTCCGGGAC...CAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAGAAGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCGATGATGCTGTCCTaGTCCAGCTGCGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLSMMLS*SSCVFI
Trigger: GATGAAGACGCAGCTGGAGCAGGACAGCATCATCGA...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACTGGTATGGCGAGATaGCCAGGTGGGAGCGCACGT +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSTGMAR*PGGSAR
Trigger: ACGTGCGCTCCCACCTGGGCATCTCGCCATACCAGT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGGTGGCCTTGAGGTaGTTCTTGCGCAGGTGCCGC +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSRVALR*FLRRCR
Trigger: GCGGCACCTGCGCAAGAAGCACCTCAAGGCCACCCG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGCGCTGCACTCCTTaGACTCGAAGGGCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSRRCTP*TRRACG
Trigger: GCCGCAAGCCCTTCGAGTGCAAGGAGTGCAGCGCCG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGTGTGGTGGATGCAGTTaGGCTTGGCCGCGAACGCGG +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRCGGCS*AWPRTR
Trigger: CCGCGTTCGCGGCCAAGCGCAACTGCATCCACCACA...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCTCGGGCACGTGCAGGTaGTGCTTGAGGATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ALLSPKSSLQCSRHGPGFSGTCR*CLRMWW
Trigger: CCACCACATCCTCAAGCAGCACCTGCACGTGCCCGA...GAAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGGGCCAGGCCCTTCTaGGAGAAGTCCAGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLRARPF*EKSRGS
Trigger: TGAGCCCCTGGACTTCTCGCAGAAGGGCCTGGCCCT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGGACGCAGCAAGGCTGTaGCACTCAGGAGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRDAARL*HSGGLS
Trigger: GCTCAGCCCTCCTGAGTGGCACAGCCTTGCTGCGTC...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTACTGCCAGTGCTTaGGGGCCCTGGGTCCGCCAC +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSVTASA*GPWVRH
Trigger: GTGGCGGACCCAGGGCCCGCAAGCACTGGCAGTAAC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CTGAGGGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGTTGTCCTCCGCTGTCTaGAGAAACGGACTGAACTTG +
Preference number: 4 (lower is better)
Translates to: LRDQELRCSGVHSPPCRRLSSAV*RNGLNL
Trigger: CAAGTTCAGTCCGTTTCTGCAGACAGCGGAGGACAA...CCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCGGACAGGTGATCTTCTaGAGGCAGTTGGTGTACGAG +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLGQVIF*RQLVYE
Trigger: CTCGTACACCAACTGCCTGCAGAAGATCACCTGTCC...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGCTCAGACGGCCACCCTaGCGTGACCTTCTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRLRRPP*RDLLLP
Trigger: AGGGAGGAGAAGGTCACGGCAGGGTGGCCGTCTGAG...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGGCAGGCCTCTTGCTaGGCGGCTCCAGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSGQASC*AAPAGP
Trigger: AGGACCTGCTGGAGCCGCGCAGCAAGAGGCCTGCCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGTGGGCAGGCCTCTTaGTGCGCGGCTCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSGGQAS*CAAPAG
Trigger: ACCTGCTGGAGCCGCGCAGCAAGAGGCCTGCCCACC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCCTCCCGCGCAGGCTaGGGTAAGGCTATGGCACTG +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSASRAG*GKAMAL
Trigger: CAGTGCCATAGCCTTACCGCAGCCTGCGCGGGAGGC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACACGGGGACCTGGGTaGGGCACAGGTCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSTRGPG*GTGLPG
Trigger: TCCTGGGAGACCTGTGCCGCACCCAGGTCCCCGTGT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACGTTTCCGCCGTGGCCTaGTCCACAGGCGCATCCCCT +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDVSAVA*STGASP
Trigger: AGGGGATGCGCCTGTGGAGCAGGCCACGGCGGAAAC...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGTCGGCGTCCCCAGTaGTCTCCTCAGTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLRRRPQ*SPQCHA
Trigger: AGCATGGCACTGAGGAGAGCACTGGGGACGCCGACG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTGCTGCTCCTGGACCATaGTTGGGAAGACTGCTCACG +
Preference number: 4 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSAAPGP*LGRLLT
Trigger: CGTGAGCAGTCTTCCCAAGCATGGTCCAGGAGCAGC...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGAGCTGCCCTCCTTATTaGGGGGCTGAACCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLSCPPY*GAEPGW
Trigger: CCAGCCAGGTTCAGCCCCCCAATAAGGAGGGCAGCT...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAAATCCGATTTGGTCCTaGAGGCTTCGAGGGGGACTT +
Preference number: 4 (lower is better)
Translates to: GPGAQVQWGTFSSLQAETNPIWS*RLRGGL
Trigger: AAGTCCCCCTCGAAGCCTCCAGGACCAAATCGGATT...TGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACGAAGATCGCCTGCAGTaGGGCGGCAGGGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDEDRLQ*GGRGLG
Trigger: TCCAAGGCCCCTGCCGCCCCACTGCAGGCGATCTTC...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTTGTGACCAGGGGCTTTaGCTTCAGAGGGGGCATGTG +
Preference number: 4 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSCDQGL*LQRGHV
Trigger: CACATGCCCCCTCTGAAGCCAAAGCCCCTGGTCACA...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGCCACCACCGTCCGTaGTGTGACCAGGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSGHHRP*CDQGLW
Trigger: CCAAAGCCCCTGGTCACACCACGGACGGTGGTGGCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTGCTGCTTGAGGATGTaGTGGATGCAGTTGCGCTTG +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLCCLRM*WMQLRL
Trigger: CAAGCGCAACTGCATCCACCACATCCTCAAGCAGCA...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp TGGCTTCTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGCTGGGTCCGCCACCTTaGTTTTCAGCAGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: WLLDACSLDACILTPPSLLGPPP*FSAGWG
Trigger: CCCCCACCCTGCTGAAAACCAAGGTGGCGGACCCAG...CAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAGAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGTGCTTGCGGGCCCTaGGTCCGCCACCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLSACGP*VRHLGF
Trigger: AAAACCAAGGTGGCGGACCCAGGGCCCGCAAGCACT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTGGGCTGCTGGCTaGAGCGGGAGGCTCACTAGA +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLLWAAG*SGRLTR
Trigger: TCTAGTGAGCCTCCCGCTCCAGCCAGCAGCCCAGAG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCTCTGGGCTGCTGGCTaGAGCGGGAGGCTCACTAGA +
Preference number: 4 (lower is better)
Translates to: CFAFSKVISAVLQARPWLLWAAG*SGRLTR
Trigger: TCTAGTGAGCCTCCCGCTCCAGCCAGCAGCCCAGAG...AAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGACTTGTTGGTGTCTGTaGTGGCCAGCATCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVTCWCL*WPASSR
Trigger: TCGAGAAGATGCTGGCCACCACAGACACCAACAAGT...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGTCACTGGGCCCATGGTaGTCGGCAGGGGCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAESLGPW*SAGAPA
Trigger: GGCCGGAGCCCCTGCCGACCACCATGGGCCCAGTGA...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACTCATCACTGGGCCCATaGTGGTCGGCAGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDSSLGP*WSAGAP
Trigger: CGGAGCCCCTGCCGACCACCATGGGCCCAGTGATGA...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCCTGCTCTTCATCACTaGGCCCATGGTGGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSPALHH*AHGGRQ
Trigger: CTGCCGACCACCATGGGCCCAGTGATGAAGAGCAGG...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTTCTGCAGGCAGTTaGTGTACGAGTTCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLSSAGS*CTSSAW
Trigger: CCAAGCGGAACTCGTACACCAACTGCCTGCAGAAGA...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTTTCTGGTGGATCCGCTaGTGGCGAACCAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSFWWIR*WRTRLC
Trigger: GCACAGCCTGGTTCGCCACCAGCGGATCCACCAGAA...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCTGCCTGGCTTTCTGGTaGATCCGCTGGTGGCGAACC +
Preference number: 4 (lower is better)
Translates to: ALLSPKSSLQCSRHGPGFCLAFW*IRWWRT
Trigger: GGTTCGCCACCAGCGGATCCACCAGAAAGCCAGGCA...GAAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCGGGTGACAGCCATGTaGTTGCTGGCATTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSRVTAM*LLALGA
Trigger: GGCTCCCAATGCCAGCAACCACATGGCTGTCACCCG...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGCGGGTGACAGCCATGTaGTTGCTGGCATTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLRVTAM*LLALGA
Trigger: GGCTCCCAATGCCAGCAACCACATGGCTGTCACCCG...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGTCCTTGGTGGCACTaGCCAAGCCCTCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLSPWWH*PSPPSG
Trigger: GCCGGAAGGAGGGCTTGGCCAGTGCCACCAAGGACT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGCCGCCGGGCTCTCTaGGTTAAGGTCACCCTGGCC +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSGRRAL*VKVTLA
Trigger: GGCCAGGGTGACCTTAACCCAGAGAGCCCGGCGGCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACGTGGCCAGGATTGGGTaGGCAGGCCTCTTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDVARIG*AGLLLR
Trigger: GCGCAGCAAGAGGCCTGCCCACCCAATCCTGGCCAC...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTAGCTGTGGCCAGGATTaGGTGGGCAGGCCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSSCGQD*VGRPLA
Trigger: AGCAAGAGGCCTGCCCACCCAATCCTGGCCACAGCT...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGCTGTGGCCAGGATTaGGTGGGCAGGCCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLSCGQD*VGRPLA
Trigger: AGCAAGAGGCCTGCCCACCCAATCCTGGCCACAGCT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCATCCCCACGAGCTaGGAGGCGCCATCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLSIPTS*EAPSAV
Trigger: CACAGCTGATGGCGCCTCCCAGCTCGTGGGGATGGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGTCCATCCCCACGAGCTaGGAGGCGCCATCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRSIPTS*EAPSAV
Trigger: CACAGCTGATGGCGCCTCCCAGCTCGTGGGGATGGA...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGCCTGGCGGAGCTCAGTaGCGCCCTCCGACGGCTGCT +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEPGGAQ*RPPTAA
Trigger: AGCAGCCGTCGGAGGGCGCCACTGAGCTCCGCCAGG...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGGCCGTTTCCGCCGTaGCCTGCTCCACAGGCGCAT +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSRPFPP*PAPQAH
Trigger: ATGCGCCTGTGGAGCAGGCCACGGCGGAAACGGCCT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGTCGTCCTTGGGCTCCTaGCGGCCGTGCGCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAESSLGS*RPCAFR
Trigger: CCGGAAGGCGCACGGCCGCCAGGAGCCCAAGGACGA...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTGCTGGCCACGCTTTTaGGGGAGTCTGTCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLCWPRF*GSLSLV
Trigger: AACCAAAGACAGACTCCCCCAAAAGCGTGGCCAGCA...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACAGGCCTTTCCCCTGTGTaGGAGCGCATGTGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: LDHAWEDCSRPLLNSAVTGLSPV*ERMCRV
Trigger: GACCCGGCACATGCGCTCCCACACAGGGGAAAGGCC...TGTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGCCTTTCCCCTGTGTaGGAGCGCATGTGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSGLSPV*ERMCRV
Trigger: GACCCGGCACATGCGCTCCCACACAGGGGAAAGGCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCCTGCGAGTCTCCTaGGGACGTGTTACTGAGCGG +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSLLRVS*GRVTER
Trigger: CCGCTCAGTAACACGTCCCCAGGAGACTCGCAGGAG...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379933.7
CDS-3UTR CCA 90 bp CTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACAGCCGGGCAGGACGCTTaGCTCCCTGGCATGATGCGT +
Preference number: 4 (lower is better)
Translates to: LDHAWEDCSRPLLNSAVTAGQDA*LPGMMR
Trigger: ACGCATCATGCCAGGGAGCCAAGCGTCCTGCCCGGC...TGTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR TCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTGGCCGAGCTCAGTaGCTTTCCGCAGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLAGRAQ*LSADAA
Trigger: TGCAGCATCTGCGGAAAGTCACTGAGCTCGGCCAGC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGACAAGCGCGTTGTaGCGCAGCAGTCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLWTSAL*RSSPRC
Trigger: ACATCGAGGACTGCTGCGTCACAACGCGCTTGTCCA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGAAGGGCGGAAGACTaGTCTGAGGGGGAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSRRAED*SEGEPR
Trigger: CCTCGGCTCCCCCTCAGATCAGTCTTCCGCCCTTCT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGAGGCCGCCTCCACTaGGCCTTTGAGGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSGGRLH*AFEELQ
Trigger: CTGAAGCTCCTCAAAGGCTCAGTGGAGGCGGCCTCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACGCAGCAGGGCCTCGATaGTGCTGTCCTGCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDAAGPR*CCPAPA
Trigger: AGCTGGAGCAGGACAGCATCATCGAGGCCCTGCTGC...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACCCTTGCGGGTGGCCTTaGGGTGCTTCTTGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDPCGWP*GASCAG
Trigger: ACCTGCGCAAGAAGCACCTCAAGGCCACCCGCAAGG...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp CTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGCTGCGTTCCAGGAAGGCAGTaGGGGGCTTGCAGTCACCAA +
Preference number: 4 (lower is better)
Translates to: LDACSLDACILTPPSLSCVPGRQ*GACSHQ
Trigger: TTGGTGACTGCAAGCCCCTCACTGCCTTCCTGGAAC...GCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGCGGGCTCCAACTTaGTCGAGACATGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLWRAPT*SRHGEV
Trigger: CACCTCCCCATGTCTCGATCAAGTTGGAGCCCGCCA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGTGGCGGGCTCCAACTTaGTCGAGACATGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRWRAPT*SRHGEV
Trigger: CACCTCCCCATGTCTCGATCAAGTTGGAGCCCGCCA...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCCGCATCCGACTaGCTGTCAGTGTGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSVSASD*LSVCVS
Trigger: GCTCACACACACTGACAGTCAGTCGGATGCGGAGAC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000611109.1
CDS-3UTR TCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTCTCCGCATCCGACTaGCTGTCAGTGTGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLVSASD*LSVCVS
Trigger: GCTCACACACACTGACAGTCAGTCGGATGCGGAGAC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000611109.1
CDS-3UTR TCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCCCGTGAGGTaGGGTCTAGCACTTCGCCCG +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSLCPVR*GLALRP
Trigger: CGGGCGAAGTGCTAGACCTCACCTCACGGGACAGAG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCACCAGGCCTGAGAAATaGGAGGAAACTTCCTACAGG +
Preference number: 4 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGTRPEK*EETSYR
Trigger: CCTGTAGGAAGTTTCCTCGCATTTCTCAGGCCTGGT...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCCGCCACATGGGTCTaGTTGTGCAGAGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLAATWV*LCRASE
Trigger: CTCACTGGCTCTGCACAAGCAGACCCATGTGGCGGC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTACGTCTTTGGTGTGCTaGAGGCCAAGCAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSTSLVC*RPSKAR
Trigger: CCTGGCCTTGCTTGGCCTGCAGCACACCAAAGACGT...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTGACGTCTTTGGTGTaGTGCAGGCCAAGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSLTSLV*CRPSKA
Trigger: GGCCTTGCTTGGCCTGCAGCACACCAAAGACGTCAG...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGGACAGGTGCTTTATaGTGTCCTTGGTCGCGGGGA +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLGTGAL*CPWSRG
Trigger: TCCCCGCGACCAAGGACAGCATAAAGCACCTGTCCC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTAGGGGGAGCCGAGGCTaGCATCTTCAGAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSRGSRG*HLQNLL
Trigger: CAGCAAATTCTGAAGATGGCAGCCTCGGCTCCCCCT...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTGTCCTGCTCCAGCTaGGTCTTCATCTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLLSCSS*VFISGW
Trigger: CCAGCCTGAGATGAAGACGCAGCTGGAGCAGGACAG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp CCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACAGGGGTAGAGCACCTTaGGCATGGCGGGCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: PGPCLGRLLTAPSKFCSDRGRAP*AWRASS
Trigger: AGAAGACGCCCGCCATGCGCAAGGTGCTCTACCCCT...GTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGCTTCTTGCGCAGGTaGCGCTCGCAGTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSCFLRR*RSQLAL
Trigger: CAAAGCCAACTGCGAGCGGCACCTGCGCAAGAAGCA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCCAGCTCGGCCGCGCTaGTACTCACATACTCGATGT +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSPARPR*YSHTRC
Trigger: ACATCGAGTATGTGAGTAGCAGCGCGGCCGAGCTGG...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCCCAGCTCGGCCGCGCTaGTACTCACATACTCGATGT +
Preference number: 4 (lower is better)
Translates to: ALLSPKSSLQCSRHGPGFPARPR*YSHTRC
Trigger: ACATCGAGTATGTGAGTAGCAGCGCGGCCGAGCTGG...GAAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCGTGCGCATGTGGATaGGCAGGGCACGATAGTGCT +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLACACG*AGHDSA
Trigger: AGCACTATCGTGCCCTGCGCATCCACATGCGCACGC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAGGCCGCGGCCGCAGTaGGTGCGCATGTGGATGCGC +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWRPRPQ*VRMWMR
Trigger: GCGCATCCACATGCGCACGCACTGCGGCCGCGGCCT...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp CTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATGCACTCGAAGGGCTTaGGGCCCTTGTGGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: LTSNVPGHWVTALLSPKSCTRRA*GPCGPR
Trigger: GCGGGGGCCACAAGGGCCGCAAGCCCTTCGAGTGCA...TGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGCGAACGCGGCGCTaGACTCCTTGCACTCGAAGG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSPRTRR*TPCTRR
Trigger: CCTTCGAGTGCAAGGAGTGCAGCGCCGCGTTCGCGG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGTCGGGCACGTGCAGGTaGTGCTTGAGGATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRSGTCR*CLRMWW
Trigger: CCACCACATCCTCAAGCAGCACCTGCACGTGCCCGA...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGGCACGTGCAGGTaGTGCTTGAGGATGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLSGTCR*CLRMWW
Trigger: CCACCACATCCTCAAGCAGCACCTGCACGTGCCCGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp CCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACTCCTGCTCGGGCACGTaGAGGTGCTGCTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: PGPCLGRLLTAPSKFCSDSCSGT*RCCLRM
Trigger: CATCCTCAAGCAGCACCTGCACGTGCCCGAGCAGGA...GTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACAGGGCCAGGCCCTTCTaGGAGAAGTCCAGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDRARPF*EKSRGS
Trigger: TGAGCCCCTGGACTTCTCGCAGAAGGGCCTGGCCCT...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTACTGCCAGTGCTTaGGGGCCCTGGGTCCGCCAC +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSVTASA*GPWVRH
Trigger: GTGGCGGACCCAGGGCCCGCAAGCACTGGCAGTAAC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACAAGCCGTGGTGTTACTaGCAGTGCTTGCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PGPCLGRLLTAPSKFCSDKPWCY*QCLRAL
Trigger: CAGGGCCCGCAAGCACTGGCAGTAACACCACGGCTT...GTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp TGGCTTCTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAAGCCGTGGTGTTACTaGCAGTGCTTGCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: WLLDACSLDACILTPPSLKPWCY*QCLRAL
Trigger: CAGGGCCCGCAAGCACTGGCAGTAACACCACGGCTT...CAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAGAAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGCATCTTCTCGATaGTGGCAAACTCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSPASSR*WQTPRW
Trigger: CCAGCGGGGAGTTTGCCAGCATCGAGAAGATGCTGG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGCCAGCATCTTCTCGATaGTGGCAAACTCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLPASSR*WQTPRW
Trigger: CCAGCGGGGAGTTTGCCAGCATCGAGAAGATGCTGG...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCTTGTCCTCCGCTGTCTaGAGAAACGGACTGAACTTG +
Preference number: 4 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGLSSAV*RNGLNL
Trigger: CAAGTTCAGTCCGTTTCTGCAGACAGCGGAGGACAA...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTGTGAGCATGTaGCTCTGTAGGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSVCVSM*LCRELA
Trigger: GGCCAGCTCCCTACAGAGGCACATGCTCACACACAC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGATGGCCTTTCCCCTGTaGTATCATGGGATCCAACAT +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVMAFPL*YHGIQH
Trigger: ATGTTGGATCCCATGATAGCACAGGGGAAAGGCCAT...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000334984.10
CDS-3UTR GCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAGACGGCGTTGTTaGCGCTGTGGGTGGACTCAT +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSLRRRC*RCGWTH
Trigger: ATGAGTCCACCCACAGCGGCAACAACGCCGTCTCAG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGACGGCCACCCTaGCGTGACCTTCTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSLRRPP*RDLLLP
Trigger: AGGGAGGAGAAGGTCACGGCAGGGTGGCCGTCTGAG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGTGGGCAGGCCTCTTaGTGCGCGGCTCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEGGQAS*CAAPAG
Trigger: ACCTGCTGGAGCCGCGCAGCAAGAGGCCTGCCCACC...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACACGGGGACCTGGGTaGGGCACAGGTCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSTRGPG*GTGLPG
Trigger: TCCTGGGAGACCTGTGCCGCACCCAGGTCCCCGTGT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CACAGCTGGGTAAGGCTTGGATTAGGCTTAGCAGGAAGACTGGGAATACCTCGCGCTACCACCCGAGGGTaGCAACCACAACCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: HSWVRLGLGLAGRLGIPRATTRG*QPQPQA
Trigger: TGCCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGC...GCGAGGTATTCCCAGTCTTCCTGCTAAGCCTAATCCAAGCCTTACCCAGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGTTCGCCCGCGGCGGCTaGAGTCTCCGCATCCGACTG +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEFARGG*SLRIRL
Trigger: CAGTCGGATGCGGAGACTGCAGCCGCCGCGGGCGAA...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGCGCCCTCCGACGGCTaGTCTCTGTCCCGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEAPSDG*SLSREV
Trigger: CACCTCACGGGACAGAGAGCAGCCGTCGGAGGGCGC...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACAGGCGCATCCCCTaGGACCTGGCGGAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSHRRIP*DLAELS
Trigger: ACTGAGCTCCGCCAGGTCGCAGGGGATGCGCCTGTG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACCGTCGGCGTCCCCAGTaGTCTCCTCAGTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDRRRPQ*SPQCHA
Trigger: AGCATGGCACTGAGGAGAGCACTGGGGACGCCGACG...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTCTGGGGCCCCTCCTCTaGAGTGCTGGCGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: MCLVTGSLLCFLQSHLCSLGPLL*SAGAIS
Trigger: GGAGATGGCGCCAGCACTGCAGAGGAGGGGCCCCAG...ACTGCAGAGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGCTGGGGCCCCTCCTCTaGAGTGCTGGCGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAELGPLL*SAGAIS
Trigger: GGAGATGGCGCCAGCACTGCAGAGGAGGGGCCCCAG...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGCCACCCTCTCTGAGCTaGTCCTGGACCATGCTTGGG +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRPPSLS*SWTMLG
Trigger: CCCAAGCATGGTCCAGGAGCAGCTCAGAGAGGGTGG...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCAGATGCTGCATGAGTaGTCGGCTCCTCCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSQMLHE*SAPPVS
Trigger: AGACACTGGAGGAGCCGACCACTCATGCAGCATCTG...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGTGAGCAGAGCATaGGGAACGCCTTGTCACAGG +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSPVSRA*GTPCHR
Trigger: CCTGTGACAAGGCGTTCCCCATGCTCTGCTCACTGG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACCACCAGGCAGGGGCGTaGCCTGCGGCTTTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDHQAGA*PAAFLD
Trigger: GTCAAGAAAAGCCGCAGGCCACGCCCCTGCCTGGTG...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp CTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACACACCAGGCAGGGGCGTaGCCTGCGGCTTTTCTTGAC +
Preference number: 4 (lower is better)
Translates to: LDHAWEDCSRPLLNSAVTHQAGA*PAAFLD
Trigger: GTCAAGAAAAGCCGCAGGCCACGCCCCTGCCTGGTG...TGTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTGCCAGCTCGATaGCCGACTCGCCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLCLPAR*PTRQRW
Trigger: CCATCTCTGGCGAGTCGGCCATCGAGCTGGCAGACA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp CTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCAAGGTGGGAGCGCACGTaGGCACGCAAGACCCCCGAG +
Preference number: 4 (lower is better)
Translates to: LTSNVPGHWVTALLSPKSRWERT*ARKTPE
Trigger: CTCGGGGGTCTTGCGTGCCCACGTGCGCTCCCACCT...TGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTTGCTTGAGGATGTGGTaGATGCAGTTGCGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSCLRMW*MQLRLA
Trigger: GGCCAAGCGCAACTGCATCCACCACATCCTCAAGCA...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAGGTGGAGGCTGGGTaGGGCCCCTGTGAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSEVEAG*GPCEES
Trigger: GCTTTCTTCACAGGGGCCCCACCCAGCCTCCACCTC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGCCTCCTCAGGCTTCTTaGCTTCGCTGGGAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRPPQAS*LRWEWP
Trigger: TGGCCACTCCCAGCGAAGCCAAGAAGCCTGAGGAGG...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCCTCAGGCTTCTTaGCTTCGCTGGGAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLPPQAS*LRWEWP
Trigger: TGGCCACTCCCAGCGAAGCCAAGAAGCCTGAGGAGG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCTTTCCAGGATTCCGCTaGGCCCCAAAGTTACAGGAA +
Preference number: 4 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGFPGFR*APKLQE
Trigger: TTCCTGTAACTTTGGGGCCCAGCGGAATCCTGGAAA...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGGTCCGCCACCTTaGTTTTCAGCAGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSLGPPP*FSAGWG
Trigger: CCCCCACCCTGCTGAAAACCAAGGTGGCGGACCCAG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGTGCTTGCGGGCCCTaGGTCCGCCACCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLSACGP*VRHLGF
Trigger: AAAACCAAGGTGGCGGACCCAGGGCCCGCAAGCACT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGCAGCGGGGGTGGCGGTaGTGGCGGCTTTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWQRGWR*WRLWGQ
Trigger: CTGTCCCCAAAGCCGCCACCACCGCCACCCCCGCTG...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCATCACTGGGCCCATaGTGGTCGGCAGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSSSLGP*WSAGAP
Trigger: CGGAGCCCCTGCCGACCACCATGGGCCCAGTGATGA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGCCTGCTCTTCATCACTaGGCCCATGGTGGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRPALHH*AHGGRQ
Trigger: CTGCCGACCACCATGGGCCCAGTGATGAAGAGCAGG...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCAGCAGCTTGTCTTCTaGGGGACTGCCCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSQQLVF*GTALLF
Trigger: GAAGAGCAGGGCAGTCCCCCAGAAGACAAGCTGCTG...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGCAGCAGCTTGTCTTCTaGGGGACTGCCCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLQQLVF*GTALLF
Trigger: GAAGAGCAGGGCAGTCCCCCAGAAGACAAGCTGCTG...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTGGTGGATCCGCTaGTGGCGAACCAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLFWWIR*WRTRLC
Trigger: GCACAGCCTGGTTCGCCACCAGCGGATCCACCAGAA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGTTCTGGTGGATCCGCTaGTGGCGAACCAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRFWWIR*WRTRLC
Trigger: GCACAGCCTGGTTCGCCACCAGCGGATCCACCAGAA...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCATGCCTGGCTTTCTaGTGGATCCGCTGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLACLAF*WIRWWR
Trigger: TCGCCACCAGCGGATCCACCAGAAAGCCAGGCATGC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTGTCCTTCCCGTaGTGTTTGGCATGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLSLSFP*CLACLA
Trigger: AGCCAGGCATGCCAAACACCACGGGAAGGACAGCGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTGCGTTGTTGCCGCTGTaGGTGGACTCATTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSALLPL*VDSFSL
Trigger: CAGCGAGAATGAGTCCACCCACAGCGGCAACAACGC...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGCCATGTGGTTGCTaGCATTGGGAGCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSQPCGC*HWEPAQ
Trigger: CTGAGCTGGCTCCCAATGCCAGCAACCACATGGCTG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGGGTGACAGCCATGTaGTTGCTGGCATTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLRVTAM*LLALGA
Trigger: GGCTCCCAATGCCAGCAACCACATGGCTGTCACCCG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGGTCCAGGCTCTaGTTGCTCGACGCGTCCTCT +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLSRSRL*LLDASS
Trigger: AGAGGACGCGTCGAGCAACCAGAGCCTGGACCTGGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTCTCCCTTCTCGTCCTTaGGCTCCTGGCGGCCGTGCG +
Preference number: 4 (lower is better)
Translates to: MCLVTGSLLCFLQSHLCSLPSRP*APGGRA
Trigger: CGCACGGCCGCCAGGAGCCCAAGGACGAGAAGGGAG...ACTGCAGAGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCCTCTGCAGTGCTaGCGCCATCTCCCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLPPLQC*RHLPSR
Trigger: ACGAGAAGGGAGATGGCGCCAGCACTGCAGAGGAGG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGCCTCCTCTGCAGTGCTaGCGCCATCTCCCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRPPLQC*RHLPSR
Trigger: ACGAGAAGGGAGATGGCGCCAGCACTGCAGAGGAGG...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCCTCTGCAGTGCTaGCGCCATCTCCCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLPPLQC*RHLPSR
Trigger: ACGAGAAGGGAGATGGCGCCAGCACTGCAGAGGAGG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACGGACCCCTGAGGTCTTaGCTGAGGGACCAGGAGCTC +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDGPLRS*LRDQEL
Trigger: GAGCTCCTGGTCCCTCAGCCAAGACCTCAGGGGTCC...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTGGCATGATGCGTTaGGGACCGGTGGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSPGMMR*GPVGFR
Trigger: CCTGAAGCCCACCGGTCCCCAACGCATCATGCCAGG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379938.7
3UTR CAA 72 bp TCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCTaGATGCCTGTTCCCTGGATGCATGCATCCTCACTC +
Preference number: 4 (lower is better)
Translates to: SSLQCSRHGPGF*MPVPWMHASSL
Trigger: GAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAGAAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCCAGCGGGCGAACTTaGCGTCATTGGGACAGGGGT +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSASGRT*RHWDRG
Trigger: ACCCCTGTCCCAATGACGTCAAGTTCGCCCGCTGGC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCCTTCCCTACACTCATaGCCGCCGACATCATGGTGT +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSPSLHS*PPTSWC
Trigger: ACACCATGATGTCGGCGGTCATGAGTGTAGGGAAGG...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCTGGCCGAGCTCAGTaGCTTTCCGCAGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSAGRAQ*LSADAA
Trigger: TGCAGCATCTGCGGAAAGTCACTGAGCTCGGCCAGC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAACGGTGTTGCTCGCTaGTGCACCTCCGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLNGVAR*CTSAGL
Trigger: CAAACCTGCGGAGGTGCATCAGCGAGCAACACCGTT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp CTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACATCGCGGGGAGAACTGTaGGAGAACCGCCTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LDHAWEDCSRPLLNSAVTSRGEL*ENRLGK
Trigger: CTTCCCTAGGCGGTTCTCTCACAGTTCTCCCCGCGA...TGTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTGCGGGTGGCCTTaGGGTGCTTCTTGCGCAGGT +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSPCGWP*GASCAG
Trigger: ACCTGCGCAAGAAGCACCTCAAGGCCACCCGCAAGG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTCCAGGAAGGCAGTaGGGGGCTTGCAGTCACCAA +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLVPGRQ*GACSHQ
Trigger: TTGGTGACTGCAAGCCCCTCACTGCCTTCCTGGAAC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp CCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACGTTCCAGGAAGGCAGTaGGGGGCTTGCAGTCACCAA +
Preference number: 4 (lower is better)
Translates to: PGPCLGRLLTAPSKFCSDVPGRQ*GACSHQ
Trigger: TTGGTGACTGCAAGCCCCTCACTGCCTTCCTGGAAC...GTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGTCCAGGGGCTCATTaGAGTCCACCGCAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLSPGAH*SPPQSY
Trigger: GTAGCTTTGCGGTGGACTTCAATGAGCCCCTGGACT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAAACATCACTCTCTTTTaGCTGGGGGATAAGCCCGTT +
Preference number: 4 (lower is better)
Translates to: GPGAQVQWGTFSSLQAETNITLF*LGDKPV
Trigger: AACGGGCTTATCCCCCAGTCAAAAGAGAGTGATGTT...TGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR TCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGCCTTCCGGCTCCGGGTaGCAGCCATGTGGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEPSGSG*QPCGCW
Trigger: CCAGCAACCACATGGCTGTCACCCGGAGCCGGAAGG...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTGCTGAGGGGGACTaGGGCTGTCACTCCATCCCC +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSCAEGD*GCHSIP
Trigger: GGGGATGGAGTGACAGCCTCAGTCCCCCTCAGCACA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp CACAGCTGGGTAAGGCTTGGATTAGGCTTAGCAGGAAGACTGGGAATACCTCGCGTAAGGCTATGGCACTaGGCGAGCAGCCACGCTCCT +
Preference number: 4 (lower is better)
Translates to: HSWVRLGLGLAGRLGIPRVRLWH*ASSHAP
Trigger: AGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTAC...GCGAGGTATTCCCAGTCTTCCTGCTAAGCCTAATCCAAGCCTTACCCAGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCGTCGCTCTTCTCTaGGGACCTTTTCTCGGCCGC +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLIVALL*GPFLGR
Trigger: GCGGCCGAGAAAAGGTCCTCAGAGAAGAGCGACGAT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTTTGTGCTGGCGAATGTaGATGGTCAGCTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSLCWRM*MVSWCW
Trigger: CCAGCACCAGCTGACCATGCACATTCGCCAGCACAA...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACTTTCCGCAGATGCTaGATGAGTGGTCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSTFRRC*MSGRLL
Trigger: GAGGAGCCGACCACTCATGCAGCATCTGCGGAAAGT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTTTCCGCAGATGCTaGATGAGTGGTCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLTFRRC*MSGRLL
Trigger: GAGGAGCCGACCACTCATGCAGCATCTGCGGAAAGT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGACTTTCCGCAGATaGTGCATGAGTGGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSVTFRR*CMSGRL
Trigger: GAGCCGACCACTCATGCAGCATCTGCGGAAAGTCAC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCCAAGTCACCTGACTaGCCGTCTTCTACCATCTTT +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLSKSPD*PSSTIF
Trigger: AAAGATGGTAGAAGACGGGCAGTCAGGTGACTTGGA...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCGAAAGGTCTGCCCATTaGATCCCTGGGAAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLERSAH*IPGKLF
Trigger: AAACAACTTCCCAGGGATGCAATGGGCAGACCTTTC...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCGAAAGGTCTGCCCATTaGATCCCTGGGAAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGERSAH*IPGKLF
Trigger: AAACAACTTCCCAGGGATGCAATGGGCAGACCTTTC...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACATGGGTCTGCTTGTaGAGAGCCAGTGAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLTWVCL*RASEQS
Trigger: GCTCTGCTCACTGGCTCTGCACAAGCAGACCCATGT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTGACCCTGGTCTaGCGCCACATGGGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLFLTLV*RHMGLL
Trigger: AAGCAGACCCATGTGGCGGCAGACCAGGGTCAAGAA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp CCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACCTGACGTCTTTGGTGTaGTGCAGGCCAAGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: PGPCLGRLLTAPSKFCSDLTSLV*CRPSKA
Trigger: GGCCTTGCTTGGCCTGCAGCACACCAAAGACGTCAG...GTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGGACAGGTGCTTTATaGTGTCCTTGGTCGCGGGGA +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLGTGAL*CPWSRG
Trigger: TCCCCGCGACCAAGGACAGCATAAAGCACCTGTCCC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTCTGGAAGGGCTaGAGGGACAGGTGCTTTATG +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSPFWKG*RDRCFM
Trigger: CATAAAGCACCTGTCCCTGCAGCCCTTCCAGAAGGG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGTGCTTGAAGATCGCCTaGAGTGGGGCGGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAECLKIA*SGAAGA
Trigger: GGCCCCTGCCGCCCCACTGCAGGCGATCTTCAAGCA...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGCAGCCCGGGGAAGCCTaGTGGGCGTTGATGAGAGGC +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEQPGEA*WALMRG
Trigger: GCCTCTCATCAACGCCCAGCAGGCTTCCCCGGGCTG...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACAGGGGTAGAGCACCTTaGGCATGGCGGGCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDRGRAP*AWRASS
Trigger: AGAAGACGCCCGCCATGCGCAAGGTGCTCTACCCCT...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTAGGCAAACACCTGGTTaGAGAAGCGGCAGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSRQTPG*RSGRGR
Trigger: TCTACCCCTGCCGCTTCTGCAACCAGGTGTTTGCCT...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp CTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACAACTGGTATGGCGAGATaGCCAGGTGGGAGCGCACGT +
Preference number: 4 (lower is better)
Translates to: LDHAWEDCSRPLLNSAVTTGMAR*PGGSAR
Trigger: ACGTGCGCTCCCACCTGGGCATCTCGCCATACCAGT...TGTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTGGTAGTGGCAGATCTTaGAAATGTAGGGCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSGSGRS*KCRAAP
Trigger: GGGAGCGGCCCTACATTTGCAAGATCTGCCACTACC...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCTTCTTGCGCAGGTaGCGCTCGCAGTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLCFLRR*RSQLAL
Trigger: CAAAGCCAACTGCGAGCGGCACCTGCGCAAGAAGCA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGCGGCGCTGCACTCCTTaGACTCGAAGGGCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAERRCTP*TRRACG
Trigger: GCCGCAAGCCCTTCGAGTGCAAGGAGTGCAGCGCCG...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp CTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCACCGCGAACGCGGCGCTaGACTCCTTGCACTCGAAGG +
Preference number: 4 (lower is better)
Translates to: LTSNVPGHWVTALLSPKSPRTRR*TPCTRR
Trigger: CCTTCGAGTGCAAGGAGTGCAGCGCCGCGTTCGCGG...TGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp TGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCCAGCATCTTCTCGATaGTGGCAAACTCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: CFAFSKVISAVLQARPWLPASSR*WQTPRW
Trigger: CCAGCGGGGAGTTTGCCAGCATCGAGAAGATGCTGG...AAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGTGGTGTTTGGCATaGCTGGCTTTCTGGTGGATC +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSPWCLA*LAFWWI
Trigger: GATCCACCAGAAAGCCAGGCATGCCAAACACCACGG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACATCTCCTCCCTGTGGCTaGAGTCCTTGGTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: LDHAWEDCSRPLLNSAVTSPPCG*SPWWHW
Trigger: CCAGTGCCACCAAGGACTGCAGCCACAGGGAGGAGA...TGTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCCTCCCTGTGGCTaGAGTCCTTGGTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSSPPCG*SPWWHW
Trigger: CCAGTGCCACCAAGGACTGCAGCCACAGGGAGGAGA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCATAGACGCTTTGCTCTaGTGGCTTTTGTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLIDALL*WLLSVL
Trigger: CAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTAT...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACCTCTCCTCAGTGCCATaGTCCTCCTCCGGCTCATGG +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDLSSVP*SSSGSW
Trigger: CCATGAGCCGGAGGAGGAGCATGGCACTGAGGAGAG...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTATCGCAGGCGAGCTTCTaGTCCTGCGAGGCCGCGCCC +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLSQASF*SCEAAP
Trigger: GGGCGCGGCCTCGCAGGAGCAGAAGCTCGCCTGCGA...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTTGTCTGCCTTaGTGGCCACGCTTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLSSCLP*WPRFWG
Trigger: CCCCCAAAAGCGTGGCCAGCAAGGCAGACAAGAGGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACAAAGTCATCTCTGCAGTaGTCCAGGCACGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LDHAWEDCSRPLLNSAVTKSSLQ*SRHGPG
Trigger: GCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTT...TGTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp CTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGCTGCGACCAGGAGCTCAGGTaGAGTGGGGTACATTCTCCT +
Preference number: 4 (lower is better)
Translates to: LDACSLDACILTPPSLSCDQELR*SGVHSP
Trigger: AGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTC...GCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp CCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACAGAGGCTCCATACACTaGAGCAAGCACAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: PGPCLGRLLTAPSKFCSDRGSIH*SKHRGP
Trigger: GGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCT...GTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCCCGACTGACTGTCTGTaGTATCATGGGATCCAACAT +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLPTDCL*YHGIQH
Trigger: ATGTTGGATCCCATGATAGCACAGACAGTCAGTCGG...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR CCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACAGCTGCCCTCCTTATTaGGGGGCTGAACCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDSCPPY*GAEPGW
Trigger: CCAGCCAGGTTCAGCCCCCCAATAAGGAGGGCAGCT...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCATGGTCAGCTGGTGCTaGGTAGTGCAAATCTTCTCA +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLMVSWC*VVQIFS
Trigger: TGAGAAGATTTGCACTACCCAGCACCAGCTGACCAT...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCATGGTCAGCTGGTGCTaGGTAGTGCAAATCTTCTCA +
Preference number: 4 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGMVSWC*VVQIFS
Trigger: TGAGAAGATTTGCACTACCCAGCACCAGCTGACCAT...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCTTGGTGGTAAATGACTaGCCACACACAGTGCACTTG +
Preference number: 4 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGLVVND*PHTVHL
Trigger: CAAGTGCACTGTGTGTGGCCAGTCATTTACCACCAA...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACATTGGTGGTAAATGACTaGCCACACACAGTGCACTTG +
Preference number: 4 (lower is better)
Translates to: GPGAQVQWGTFSSLQAETLVVND*PHTVHL
Trigger: CAAGTGCACTGTGTGTGGCCAGTCATTTACCACCAA...TGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGTACCATCTTTTTAGCTaGTGCTGGGTCTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVYHLFS*CWVFSL
Trigger: GAGAGAGAAGACCCAGCACCAGCTAAAAAGATGGTA...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp CTGAGGGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGGTGAATCCTAAGTCGTaGAAGCCAGCAGGAATTGAA +
Preference number: 4 (lower is better)
Translates to: LRDQELRCSGVHSPPCRRVNPKS*KPAGIE
Trigger: TTCAATTCCTGCTGGCTTCCACGACTTAGGATTCAC...CCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGCCAGTGAGCAGAGCATaGGGAACGCCTTGTCACAGG +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRPVSRA*GTPCHR
Trigger: CCTGTGACAAGGCGTTCCCCATGCTCTGCTCACTGG...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGGTCTGCCGCCACATaGGTCTGCTTGTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSWSAAT*VCLCRA
Trigger: GGCTCTGCACAAGCAGACCCATGTGGCGGCAGACCA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp CTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACATGGTCTGCCGCCACATaGGTCTGCTTGTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LDHAWEDCSRPLLNSAVTWSAAT*VCLCRA
Trigger: GGCTCTGCACAAGCAGACCCATGTGGCGGCAGACCA...TGTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGCCAGGAAGCCCTTCTaGTCCAGGGCGTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEARKPF*SRASPG
Trigger: GCCTGGTGACGCCCTGGACCAGAAGGGCTTCCTGGC...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp AAGACTGGGAATACCTCGCTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTGTCTGCCAGCTCGATaGCCGACTCGCCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: KTGNTSLTSNVPGHWVTACLPAR*PTRQRW
Trigger: CCATCTCTGGCGAGTCGGCCATCGAGCTGGCAGACA...AGCAGTGACCCAGTGACCAGGCACATTACTCGTGAGCGAGGTATTCCCAGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGATCTTCAGAATTTGCTaGATGTCTGCCAGCTCGATG +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVIFRIC*MSASSM
Trigger: CATCGAGCTGGCAGACATCCAGCAAATTCTGAAGAT...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGACCAGGGGCTTTaGCTTCAGAGGGGGCATGTG +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLCDQGL*LQRGHV
Trigger: CACATGCCCCCTCTGAAGCCAAAGCCCCTGGTCACA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGCCACCACCGTCCGTaGTGTGACCAGGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEGHHRP*CDQGLW
Trigger: CCAAAGCCCCTGGTCACACCACGGACGGTGGTGGCC...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGAGAAGGCAAACACCTaGTTGCAGAAGCGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLEKANT*LQKRQG
Trigger: CCCCTGCCGCTTCTGCAACCAGGTGTTTGCCTTCTC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGAGAAGGCAAACACCTaGTTGCAGAAGCGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLEKANT*LQKRQG
Trigger: CCCCTGCCGCTTCTGCAACCAGGTGTTTGCCTTCTC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp CCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACGAGAAGGCAAACACCTaGTTGCAGAAGCGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: PGPCLGRLLTAPSKFCSDEKANT*LQKRQG
Trigger: CCCCTGCCGCTTCTGCAACCAGGTGTTTGCCTTCTC...GTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTGATGTTGCACTGGTATaGCGAGATGCCCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSDVALV*RDAQVG
Trigger: TCCCACCTGGGCATCTCGCCATACCAGTGCAACATC...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGATGTTGCACTGGTATaGCGAGATGCCCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSDVALV*RDAQVG
Trigger: TCCCACCTGGGCATCTCGCCATACCAGTGCAACATC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCTCGCAGATGTTGCACTaGTATGGCGAGATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: ALLSPKSSLQCSRHGPGFSQMLH*YGEMPR
Trigger: CCTGGGCATCTCGCCATACCAGTGCAACATCTGCGA...GAAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTTGCTGCTTGAGGATGTaGTGGATGCAGTTGCGCTTG +
Preference number: 4 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSCCLRM*WMQLRL
Trigger: CAAGCGCAACTGCATCCACCACATCCTCAAGCAGCA...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCTGGCTTCGCTGGGAGTaGCCAAATCCTTGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: ALLSPKSSLQCSRHGPGFWLRWE*PNPCPL
Trigger: AAGGGGACAAGGATTTGGCCACTCCCAGCGAAGCCA...GAAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp CTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGCTGCACAGATGAGATGATCTaGGCAATGGAGGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: LDACSLDACILTPPSLSCTDEMI*AMEASG
Trigger: CCCGCTGGCCTCCATTGCCCAGATCATCTCATCTGT...GCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACAGATGAGATGATCTaGGCAATGGAGGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSTDEMI*AMEASG
Trigger: CCCGCTGGCCTCCATTGCCCAGATCATCTCATCTGT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGACAGATGAGATGATCTaGGCAATGGAGGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLTDEMI*AMEASG
Trigger: CCCGCTGGCCTCCATTGCCCAGATCATCTCATCTGT...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGTTTTCAGCAGGGTaGGGGCCGAGGATACAGATG +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLWFSAG*GPRIQM
Trigger: CATCTGTATCCTCGGCCCCCACCCTGCTGAAAACCA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGGTTTTCAGCAGGGTaGGGGCCGAGGATACAGATG +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSWFSAG*GPRIQM
Trigger: CATCTGTATCCTCGGCCCCCACCCTGCTGAAAACCA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACCGGTGGTGGCGGCTTTaGGGACAGAACCTCCTAAGC +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDRWWRL*GQNLLS
Trigger: GCTTAGGAGGTTCTGTCCCCAAAGCCGCCACCACCG...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACACGGTGGTGGCGGCTTTaGGGACAGAACCTCCTAAGC +
Preference number: 4 (lower is better)
Translates to: LDHAWEDCSRPLLNSAVTRWWRL*GQNLLS
Trigger: GCTTAGGAGGTTCTGTCCCCAAAGCCGCCACCACCG...TGTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGACTCTTTTGGGCTGGTaGTGGCAGCGGGGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAETLLGW*WQRGWR
Trigger: CCGCCACCCCCGCTGCCACCACCAGCCCAAAAGAGT...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGCTCACTAGACTCTTTTaGGCTGGTGGTGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRLTRLF*AGGGSG
Trigger: CCCGCTGCCACCACCAGCCCAAAAGAGTCTAGTGAG...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCATCTTCTCGATGCTaGCAAACTCCCCGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSASSRC*QTPRWS
Trigger: ACTCCAGCGGGGAGTTTGCCAGCATCGAGAAGATGC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCATCTTCTCGATGCTaGCAAACTCCCCGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLASSRC*QTPRWS
Trigger: ACTCCAGCGGGGAGTTTGCCAGCATCGAGAAGATGC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGGCATCTTCTCGATGCTaGCAAACTCCCCGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLASSRC*QTPRWS
Trigger: ACTCCAGCGGGGAGTTTGCCAGCATCGAGAAGATGC...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGCAGCTTGTCTTCTaGGGGACTGCCCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLQQLVF*GTALLF
Trigger: GAAGAGCAGGGCAGTCCCCCAGAAGACAAGCTGCTG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTTCTTCTGCAGGCAGTTaGTGTACGAGTTCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSSSAGS*CTSSAW
Trigger: CCAAGCGGAACTCGTACACCAACTGCCTGCAGAAGA...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp CTGAGGGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGTGTTTGCGCAACTGGTaGCGTTCACAGTTAGATTTG +
Preference number: 4 (lower is better)
Translates to: LRDQELRCSGVHSPPCRRCLRNW*RSQLDL
Trigger: CAAATCTAACTGTGAACGCCACCAGTTGCGCAAACA...CCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGGTGGATCCGCTGGTaGCGAACCAGGCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSWWIRW*RTRLCF
Trigger: GAAGCACAGCCTGGTTCGCCACCAGCGGATCCACCA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGCCTGGCTTTCTGGTaGATCCGCTGGTGGCGAACC +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSCLAFW*IRWWRT
Trigger: GGTTCGCCACCAGCGGATCCACCAGAAAGCCAGGCA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCCTTCCCGTGGTGTTTaGCATGCCTGGCTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSPSRGV*HAWLSG
Trigger: ACCAGAAAGCCAGGCATGCCAAACACCACGGGAAGG...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTGTCCTTCCCGTaGTGTTTGGCATGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLSLSFP*CLACLA
Trigger: AGCCAGGCATGCCAAACACCACGGGAAGGACAGCGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGCTGCTGTTGCCGCTGTGGGTaGACTCATTCTCGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LDACSLDACILTPPSLSCCCRCG*THSRCP
Trigger: AGGACAGCGAGAATGAGTCCACCCACAGCGGCAACA...GCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTTGCCGCTGTGGGTaGACTCATTCTCGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSCCRCG*THSRCP
Trigger: AGGACAGCGAGAATGAGTCCACCCACAGCGGCAACA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTTGTTGCCGCTGTGGGTaGACTCATTCTCGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSCCRCG*THSRCP
Trigger: AGGACAGCGAGAATGAGTCCACCCACAGCGGCAACA...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGGTTGCTGGCATTaGGAGCCAGCTCAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLCGCWH*EPAQPR
Trigger: ACGAGGCTGAGCTGGCTCCCAATGCCAGCAACCACA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGGGCCGCCGGGCTCTCTaGGTTAAGGTCACCCTGGCC +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWGRRAL*VKVTLA
Trigger: GGCCAGGGTGACCTTAACCCAGAGAGCCCGGCGGCC...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AAGACTGGGAATACCTCGCTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTAGCTGTGGCCAGGATTaGGTGGGCAGGCCTCTTGCT +
Preference number: 4 (lower is better)
Translates to: KTGNTSLTSNVPGHWVTASCGQD*VGRPLA
Trigger: AGCAAGAGGCCTGCCCACCCAATCCTGGCCACAGCT...AGCAGTGACCCAGTGACCAGGCACATTACTCGTGAGCGAGGTATTCCCAGTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTAGCATCCCCTGCGACCTaGCGGAGCTCAGTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLASPAT*RSSVAP
Trigger: GGGCGCCACTGAGCTCCGCCAGGTCGCAGGGGATGC...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCAAGGCCGTTTCCGCCGTaGCCTGCTCCACAGGCGCAT +
Preference number: 4 (lower is better)
Translates to: LTSNVPGHWVTALLSPKSRPFPP*PAPQAH
Trigger: ATGCGCCTGTGGAGCAGGCCACGGCGGAAACGGCCT...TGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp CTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACACCTCCTCTGCAGTGCTaGCGCCATCTCCCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: LDHAWEDCSRPLLNSAVTPPLQC*RHLPSR
Trigger: ACGAGAAGGGAGATGGCGCCAGCACTGCAGAGGAGG...TGTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTGTCTGCCTTGCTaGCCACGCTTTTGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSSCLPC*PRFWGS
Trigger: ACTCCCCCAAAAGCGTGGCCAGCAAGGCAGACAAGA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTTCTTGTCTGCCTTGCTaGCCACGCTTTTGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSSCLPC*PRFWGS
Trigger: ACTCCCCCAAAAGCGTGGCCAGCAAGGCAGACAAGA...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGTGCACAGGATGCTCATaGGTAAAAATAACCCTGCCT +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVCTGCS*VKITLP
Trigger: AGGCAGGGTTATTTTTACCCATGAGCATCCTGTGCA...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp TGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCCTTCCCTACACTCATaGCCGCCGACATCATGGTGT +
Preference number: 4 (lower is better)
Translates to: CFAFSKVISAVLQARPWLPSLHS*PPTSWC
Trigger: ACACCATGATGTCGGCGGTCATGAGTGTAGGGAAGG...AAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCGCAGATGCTGCATaGGTGGTCGGCTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSSADAA*VVGSSS
Trigger: ACTGGAGGAGCCGACCACTCATGCAGCATCTGCGGA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCAAGGGTTGTTCTGTATaGAAGGTCTGCCCATTGCAT +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLKGCSV*KVCPLH
Trigger: ATGCAATGGGCAGACCTTTCATACAGAACAACCCTT...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACAACGGTGTTGCTCGCTaGTGCACCTCCGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDNGVAR*CTSAGL
Trigger: CAAACCTGCGGAGGTGCATCAGCGAGCAACACCGTT...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTGCAGAGCCAGTaGGCAGAGCATGGGGAACGC +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSLVQSQ*AEHGER
Trigger: GCGTTCCCCATGCTCTGCTCACTGGCTCTGCACAAG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACCGCCAGAGATGGGCTTaGCCACAATGCTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDRQRWA*PQCCCQ
Trigger: CTGACAGCAGCATTGTGGTCAAGCCCATCTCTGGCG...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGAGAAGGGCGGAAGACTaGTCTGAGGGGGAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAERRAED*SEGEPR
Trigger: CCTCGGCTCCCCCTCAGATCAGTCTTCCGCCCTTCT...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGCCTCCACTGAGCCTTTaGGGAGCTTCAGGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEPPLSL*GASGAV
Trigger: CACCGCCCCTGAAGCTCCTCAAAGGCTCAGTGGAGG...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGTCCAGGGGCTCATTaGAGTCCACCGCAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLSPGAH*SPPQSY
Trigger: GTAGCTTTGCGGTGGACTTCAATGAGCCCCTGGACT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTAGCCACTCAGGAGGGCTaGGCTGCCCACGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLATQEG*AAHEWR
Trigger: CCTCCACTCGTGGGCAGCTCAGCCCTCCTGAGTGGC...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACGGCTGTGCTTCAAGGTaGAGGTTCGCTCGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDGCASR*RFARRS
Trigger: AGACCTGCGAGCGAACCTTCACCTTGAAGCACAGCC...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp CTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACAGGCTGTGCTTCAAGGTaGAGGTTCGCTCGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LDHAWEDCSRPLLNSAVTGCASR*RFARRS
Trigger: AGACCTGCGAGCGAACCTTCACCTTGAAGCACAGCC...TGTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGTGTGCTGAGGGGGACTaGGGCTGTCACTCCATCCCC +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAECAEGD*GCHSIP
Trigger: GGGGATGGAGTGACAGCCTCAGTCCCCCTCAGCACA...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCCCTGGTTTTGGCCTaGAACCATATTGGAAACCTT +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLSLVLA*NHIGNL
Trigger: AAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGA...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACGTCTCCGCATCCGACTaGCTGTCAGTGTGTGTGAGC +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDVSASD*LSVCVS
Trigger: GCTCACACACACTGACAGTCAGTCGGATGCGGAGAC...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000611109.1
CDS-3UTR TCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCGTCGCTCTTCTCTaGGGACCTTTTCTCGGCCGC +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSIVALL*GPFLGR
Trigger: GCGGCCGAGAAAAGGTCCTCAGAGAAGAGCGACGAT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp TGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTACTTTCCGCAGATGCTaGATGAGTGGTCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: CFAFSKVISAVLQARPWLTFRRC*MSGRLL
Trigger: GAGGAGCCGACCACTCATGCAGCATCTGCGGAAAGT...AAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGACTTTCCGCAGATGCTaGATGAGTGGTCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRTFRRC*MSGRLL
Trigger: GAGGAGCCGACCACTCATGCAGCATCTGCGGAAAGT...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGCAGACAAAACGGTGTTaGTCGCTGATGCACCTCCGC +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRQTKRC*SLMHLR
Trigger: GCGGAGGTGCATCAGCGAGCAACACCGTTTTGTCTG...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACGTCTTTGGTGTGCTaGAGGCCAAGCAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSTSLVC*RPSKAR
Trigger: CCTGGCCTTGCTTGGCCTGCAGCACACCAAAGACGT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACCTGACGTCTTTGGTGTaGTGCAGGCCAAGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDLTSLV*CRPSKA
Trigger: GGCCTTGCTTGGCCTGCAGCACACCAAAGACGTCAG...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCTTCTGGAAGGGCTaGAGGGACAGGTGCTTTATG +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLPFWKG*RDRCFM
Trigger: CATAAAGCACCTGTCCCTGCAGCCCTTCCAGAAGGG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAATTTGCTGGATGTCTaGCAGCTCGATGGCCGACTC +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSNLLDV*QLDGRL
Trigger: GAGTCGGCCATCGAGCTGGCAGACATCCAGCAAATT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp TGGCTTCTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGGGGGAGCCGAGGCTaGCATCTTCAGAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: WLLDACSLDACILTPPSLRGSRG*HLQNLL
Trigger: CAGCAAATTCTGAAGATGGCAGCCTCGGCTCCCCCT...CAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAGAAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGTTCAGAGGGGGCATGTaGTTGAAGATCGCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLFRGGM*LKIACS
Trigger: ACTGCAGGCGATCTTCAAGCACATGCCCCCTCTGAA...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTTTCAGAGGGGGCATGTaGTTGAAGATCGCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSFRGGM*LKIACS
Trigger: ACTGCAGGCGATCTTCAAGCACATGCCCCCTCTGAA...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGTCGATGATGCTGTCCTaGTCCAGCTGCGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLSMMLS*SSCVFI
Trigger: GATGAAGACGCAGCTGGAGCAGGACAGCATCATCGA...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGTAGTGGCAGATCTTaGAAATGTAGGGCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLGSGRS*KCRAAP
Trigger: GGGAGCGGCCCTACATTTGCAAGATCTGCCACTACC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGCTCGGCCGCGCTaGTACTCACATACTCGATGT +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSPARPR*YSHTRC
Trigger: ACATCGAGTATGTGAGTAGCAGCGCGGCCGAGCTGG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCGTGCGCATGTGGATaGGCAGGGCACGATAGTGCT +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSACACG*AGHDSA
Trigger: AGCACTATCGTGCCCTGCGCATCCACATGCGCACGC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGTGTGGTGGATGCAGTTaGGCTTGGCCGCGAACGCGG +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAECGGCS*AWPRTR
Trigger: CCGCGTTCGCGGCCAAGCGCAACTGCATCCACCACA...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCTGCTCGGGCACGTaGAGGTGCTGCTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSSCSGT*RCCLRM
Trigger: CATCCTCAAGCAGCACCTGCACGTGCCCGAGCAGGA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTTCTGGGGGACTaGCCTGCTCTTCATCACTGG +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLCLLGD*PALHHW
Trigger: CCAGTGATGAAGAGCAGGGCAGTCCCCCAGAAGACA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCGTGGTGTTTGGCATaGCTGGCTTTCTGGTGGATC +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLPWCLA*LAFWWI
Trigger: GATCCACCAGAAAGCCAGGCATGCCAAACACCACGG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACCTGAGACGGCGTTGTTaGCGCTGTGGGTGGACTCAT +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDLRRRC*RCGWTH
Trigger: ATGAGTCCACCCACAGCGGCAACAACGCCGTCTCAG...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAGACGGCGTTGTTaGCGCTGTGGGTGGACTCAT +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSLRRRC*RCGWTH
Trigger: ATGAGTCCACCCACAGCGGCAACAACGCCGTCTCAG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCCTCCCTGTGGCTaGAGTCCTTGGTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSSPPCG*SPWWHW
Trigger: CCAGTGCCACCAAGGACTGCAGCCACAGGGAGGAGA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTAGCGCCCTCCGACGGCTaGTCTCTGTCCCGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLAPSDG*SLSREV
Trigger: CACCTCACGGGACAGAGAGCAGCCGTCGGAGGGCGC...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGCCGTGCTCTTCCCGGTaGACCGGCGAGGCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLPCSSR*TGEAVS
Trigger: GGAAACGGCCTCGCCGGTGCACCGGGAAGAGCACGG...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGCCCCTCCTCTGCAGTaGTGGCGCCATCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEAPPLQ*WRHLPS
Trigger: AGAAGGGAGATGGCGCCAGCACTGCAGAGGAGGGGC...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGTGCCGGGTCAGGTCCTaGAGCGACCAGAACCGCTTG +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAECRVRS*SDQNRL
Trigger: CAAGCGGTTCTGGTCGCTGCAGGACCTGACCCGGCA...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACCAGAGCCACCACTCCTaGAACACACAGTCGGAGCAA +
Preference number: 4 (lower is better)
Translates to: PGPCLGRLLTAPSKFCSDQSHHS*NTQSEQ
Trigger: TTGCTCCGACTGTGTGTTCCAGGAGTGGTGGCTCTG...GTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGAGCCACCACTCCTaGAACACACAGTCGGAGCAA +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLQSHHS*NTQSEQ
Trigger: TTGCTCCGACTGTGTGTTCCAGGAGTGGTGGCTCTG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp TGGCTTCTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGCAGAGCCACCACTCCTaGAACACACAGTCGGAGCAA +
Preference number: 4 (lower is better)
Translates to: WLLDACSLDACILTPPSLQSHHS*NTQSEQ
Trigger: TTGCTCCGACTGTGTGTTCCAGGAGTGGTGGCTCTG...CAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAGAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAATCCGATTTGGTCCTaGAGGCTTCGAGGGGGACTT +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLNPIWS*RLRGGL
Trigger: AAGTCCCCCTCGAAGCCTCCAGGACCAAATCGGATT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTGTGTCTGTGTTGTGCTaGCGAATGTGCATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSVSVLC*RMCMVS
Trigger: GCTGACCATGCACATTCGCCAGCACAACACAGACAC...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACGTTTCAGAGGAGATaGAGGGGCTGTGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSTFQRR*RGCGCG
Trigger: GCCACAGCCACAGCCCCTCCATCTCCTCTGAAACGT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACACGTTTCAGAGGAGATaGAGGGGCTGTGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDTFQRR*RGCGCG
Trigger: GCCACAGCCACAGCCCCTCCATCTCCTCTGAAACGT...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTGAATGGGTCTCCATGTaGGTCTCCAGTCCATACTTG +
Preference number: 4 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSEWVSM*VSSPYL
Trigger: CAAGTATGGACTGGAGACCCACATGGAGACCCATTC...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGACAGGCTCAGCAGGTTaGTGCAGCCGGGGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAETGSAG*CSRGPE
Trigger: CTCAGGACCCCGGCTGCACCAACCTGCTGAGCCTGT...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp CACAGCTGGGTAAGGCTTGGATTAGGCTTAGCAGGAAGACTGGGAATACCTCGCTGTGACCAGGGGCTTTaGCTTCAGAGGGGGCATGTG +
Preference number: 4 (lower is better)
Translates to: HSWVRLGLGLAGRLGIPRCDQGL*LQRGHV
Trigger: CACATGCCCCCTCTGAAGCCAAAGCCCCTGGTCACA...GCGAGGTATTCCCAGTCTTCCTGCTAAGCCTAATCCAAGCCTTACCCAGCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTAGCCGCGTGGCCGCGTaGGGCTGGGTCCCGGACTTG +
Preference number: 4 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTASRVAA*GWVPDL
Trigger: CAAGTCCGGGACCCAGCCCCACGCGGCCACGCGGCT...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGAGAGCACCTTGCGCATaGCGGGCGTCTTCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAERAPCA*RASSCR
Trigger: GCGGCAAGAAGACGCCCGCCATGCGCAAGGTGCTCT...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAGAAGGCAAACACCTaGTTGCAGAAGCGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSEKANT*LQKRQG
Trigger: CCCCTGCCGCTTCTGCAACCAGGTGTTTGCCTTCTC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCAGATGTTGCACTaGTATGGCGAGATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLSQMLH*YGEMPR
Trigger: CCTGGGCATCTCGCCATACCAGTGCAACATCTGCGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGAACTTGATCGAGACATaGGGAGGTGGAGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRNLIET*GGGGWV
Trigger: CACCCAGCCTCCACCTCCCCATGTCTCGATCAAGTT...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCTTCTTGGCTTCGCTaGGAGTGGCCAAATCCTTGT +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSASWLR*EWPNPC
Trigger: ACAAGGATTTGGCCACTCCCAGCGAAGCCAAGAAGC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTGCTTCTTGGCTTCGCTaGGAGTGGCCAAATCCTTGT +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSASWLR*EWPNPC
Trigger: ACAAGGATTTGGCCACTCCCAGCGAAGCCAAGAAGC...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTTCTTGGCTTCGCTaGGAGTGGCCAAATCCTTGT +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLASWLR*EWPNPC
Trigger: ACAAGGATTTGGCCACTCCCAGCGAAGCCAAGAAGC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCCTCAGGCTTCTTaGCTTCGCTGGGAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSPPQAS*LRWEWP
Trigger: TGGCCACTCCCAGCGAAGCCAAGAAGCCTGAGGAGG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGCCGGAGCAGGGGCCATaGGGCTTTCCAGGATTCCGC +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWPEQGP*GFPGFR
Trigger: GCGGAATCCTGGAAAGCCCCATGGCCCCTGCTCCGG...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTAGCTGTCTGAAGCCGTaGTGTTACTGCCAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSSCLKP*CYCQCL
Trigger: CAAGCACTGGCAGTAACACCACGGCTTCAGACAGCT...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTACGGGGGTGGCGGTGGTaGCGGCTTTGGGGACAGAAC +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLRGWRW*RLWGQN
Trigger: GTTCTGTCCCCAAAGCCGCCACCACCGCCACCCCCG...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTAGACTCTTTTaGGCTGGTGGTGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSLTRLF*AGGGSG
Trigger: CCCGCTGCCACCACCAGCCCAAAAGAGTCTAGTGAG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACCTCACTAGACTCTTTTaGGCTGGTGGTGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDLTRLF*AGGGSG
Trigger: CCCGCTGCCACCACCAGCCCAAAAGAGTCTAGTGAG...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTTGTTGGTGTCTGTGGTaGCCAGCATCTTCTCGATGC +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSCWCLW*PASSRC
Trigger: GCATCGAGAAGATGCTGGCCACCACAGACACCAACA...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTTGGTGTCTGTGGTaGCCAGCATCTTCTCGATGC +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSCWCLW*PASSRC
Trigger: GCATCGAGAAGATGCTGGCCACCACAGACACCAACA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGCAGCTTGTCTTCTaGGGGACTGCCCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSQQLVF*GTALLF
Trigger: GAAGAGCAGGGCAGTCCCCCAGAAGACAAGCTGCTG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACACAGCAGCTTGTCTTCTaGGGGACTGCCCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: LDHAWEDCSRPLLNSAVTQQLVF*GTALLF
Trigger: GAAGAGCAGGGCAGTCCCCCAGAAGACAAGCTGCTG...TGTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTGGTGGATCCGCTaGTGGCGAACCAGGCTGTGC +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSFWWIR*WRTRLC
Trigger: GCACAGCCTGGTTCGCCACCAGCGGATCCACCAGAA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGCCTGGCTTTCTGGTaGATCCGCTGGTGGCGAACC +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSCLAFW*IRWWRT
Trigger: GGTTCGCCACCAGCGGATCCACCAGAAAGCCAGGCA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCATGCCTGGCTTTCTaGTGGATCCGCTGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSACLAF*WIRWWR
Trigger: TCGCCACCAGCGGATCCACCAGAAAGCCAGGCATGC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGTGTTTGGCATGCCTaGCTTTCTGGTGGATCCGCT +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLGVWHA*LSGGSA
Trigger: AGCGGATCCACCAGAAAGCCAGGCATGCCAAACACC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTCCCGTGGTGTTTaGCATGCCTGGCTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLPSRGV*HAWLSG
Trigger: ACCAGAAAGCCAGGCATGCCAAACACCACGGGAAGG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACCAGCCATGTGGTTGCTaGCATTGGGAGCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDQPCGC*HWEPAQ
Trigger: CTGAGCTGGCTCCCAATGCCAGCAACCACATGGCTG...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCAGGCTGCAGTCCTTGGTaGCACTGGCCAAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: LTSNVPGHWVTALLSPKSGCSPW*HWPSPP
Trigger: AGGAGGGCTTGGCCAGTGCCACCAAGGACTGCAGCC...TGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGCTGCAGTCCTTGGTaGCACTGGCCAAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEGCSPW*HWPSPP
Trigger: AGGAGGGCTTGGCCAGTGCCACCAAGGACTGCAGCC...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGTTAAGGTCACCCTaGCCAGGCTCAGACGGCCAC +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEGLRSP*PGSDGH
Trigger: GTGGCCGTCTGAGCCTGGCCAGGGTGACCTTAACCC...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCAGGTCCAGGCTCTaGTTGCTCGACGCGTCCTCT +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSSRSRL*LLDASS
Trigger: AGAGGACGCGTCGAGCAACCAGAGCCTGGACCTGGA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGCTGCTGCTGGCCACGCTTTTaGGGGAGTCTGTCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: LDACSLDACILTPPSLSCCWPRF*GSLSLV
Trigger: AACCAAAGACAGACTCCCCCAAAAGCGTGGCCAGCA...GCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp TGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTTCTTGTCTGCCTTGCTaGCCACGCTTTTGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: CFAFSKVISAVLQARPWLSCLPC*PRFWGS
Trigger: ACTCCCCCAAAAGCGTGGCCAGCAAGGCAGACAAGA...AAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCTGCACAGGATGCTCATaGGTAAAAATAACCCTGCCT +
Preference number: 4 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGCTGCS*VKITLP
Trigger: AGGCAGGGTTATTTTTACCCATGAGCATCCTGTGCA...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
3UTR CAA 72 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTaGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSC*SLSLSLSLSLS
Trigger: AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTCTCCAAGTCACCTaGCTGCCCGTCTTCTACCAT +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLLLQVT*LPVFYH
Trigger: ATGGTAGAAGACGGGCAGTCAGGTGACTTGGAGAAG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCGATGTGTTCGAAAGGTaGCACAACAAATGTCACATC +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLDVFER*HNKCHI
Trigger: GATGTGACATTTGTTGTGTCACCTTTCGAACACATC...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGGACAAGCGCGTTGTaGCGCAGCAGTCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSWTSAL*RSSPRC
Trigger: ACATCGAGGACTGCTGCGTCACAACGCGCTTGTCCA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTTACAGGAGAAGTCCGTaGATCCTAAGTCGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSYRRSP*ILSRGS
Trigger: GCTTCCACGACTTAGGATTCACGGACTTCTCCTGTA...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTACAGGAGAAGTCCGTaGATCCTAAGTCGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSYRRSP*ILSRGS
Trigger: GCTTCCACGACTTAGGATTCACGGACTTCTCCTGTA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTGAGTGTCTGGAGCTaGATTGCCTGGTTGTCATCC +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSLSVWS*IAWLSS
Trigger: GGATGACAACCAGGCAATTCAGCTCCAGACACTCAA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGAGGTAGCTGACACTTaGGTGTCTGGAGCTGAATTG +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLEVADT*VSGAEL
Trigger: CAATTCAGCTCCAGACACTCAAGTGTCAGCTACCTC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACAGCAGCTTCGAAAGGTaGCAGGCTCAGCAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDSSFER*QAQQVG
Trigger: ACCAACCTGCTGAGCCTGTCACCTTTCGAAGCTGCT...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGCAGCTTCGAAAGGTaGCAGGCTCAGCAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSSSFER*QAQQVG
Trigger: ACCAACCTGCTGAGCCTGTCACCTTTCGAAGCTGCT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCCAGAGATGGGCTTaGCCACAATGCTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSRQRWA*PQCCCQ
Trigger: CTGACAGCAGCATTGTGGTCAAGCCCATCTCTGGCG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAGCGGCAGGCTGGGGCTaGTACAGCCCGGGGAAGCCT +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSAAGWG*YSPGKP
Trigger: AGGCTTCCCCGGGCTGTATCAGCCCCAGCCTGCCGC...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGAGGATACAGATGAGATaGTCTGGGCAATGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLRIQMR*SGQWRP
Trigger: TGGCCTCCATTGCCCAGATCATCTCATCTGTATCCT...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCAGAAACGGACTaGACTTGTTGGTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLSAETD*TCWCLW
Trigger: CCACAGACACCAACAAGTTCAGTCCGTTTCTGCAGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGACAGTGGGGACAGGTaGTCTTCTGCAGGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSDSGDR*SSAGSW
Trigger: CCAACTGCCTGCAGAAGATCACCTGTCCCCACTGTC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp CCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACCAAGGGAAGGGTTTCTaGCCAGTGTGTGTGAGCATG +
Preference number: 4 (lower is better)
Translates to: PGPCLGRLLTAPSKFCSDQGKGF*PVCVSM
Trigger: CATGCTCACACACACTGGTCAGAAACCCTTCCCTTG...GTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR TCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTTCGCTCGCAGGTCTaGCATTTGTATGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLVRSQV*HLYGLS
Trigger: GGAAAGGCCATACAAATGTCAGACCTGCGAGCGAAC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGCTGTGCTTCAAGGTaGAGGTTCGCTCGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSGCASR*RFARRS
Trigger: AGACCTGCGAGCGAACCTTCACCTTGAAGCACAGCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTACAGCCAAAGGGCACTaGGGAAACCCCATGAAGTAT +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSTAKGH*GNPMKY
Trigger: ATACTTCATGGGGTTTCCTCAGTGCCCTTTGGCTGT...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACAGCCAAAGGGCACTaGGGAAACCCCATGAAGTAT +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSTAKGH*GNPMKY
Trigger: ATACTTCATGGGGTTTCCTCAGTGCCCTTTGGCTGT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCGTGCACGTTTCTGTGTaGACAAGTCTATGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGVHVSV*TSLCKG
Trigger: TCCTTTACATAGACTTGTTCACACAGAAACGTGCAC...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp AAGACTGGGAATACCTCGCTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTCACGTCGCTGGGAGCTaGTTACTGCTACATCTCACC +
Preference number: 4 (lower is better)
Translates to: KTGNTSLTSNVPGHWVTAHVAGS*LLLHLT
Trigger: GGTGAGATGTAGCAGTAATCAGCTCCCAGCGACGTG...AGCAGTGACCCAGTGACCAGGCACATTACTCGTGAGCGAGGTATTCCCAGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR GCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTTTTCCTGGTTCCTTCTaGCAATCCGATTTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSFPGSF*QSDLVL
Trigger: CAGGACCAAATCGGATTGGCAGAAGGAACCAGGAAA...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp CTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGCTGCTGCATGGTCAGCTGGTaGTGGGTAGTGCAAATCTTC +
Preference number: 4 (lower is better)
Translates to: LDACSLDACILTPPSLSCCMVSW*WVVQIF
Trigger: GAAGATTTGCACTACCCAGCACCAGCTGACCATGCA...GCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTTGCATGGTCAGCTGGTaGTGGGTAGTGCAAATCTTC +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSCMVSW*WVVQIF
Trigger: GAAGATTTGCACTACCCAGCACCAGCTGACCATGCA...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AAGACTGGGAATACCTCGCTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGTGCTGGCGAATGTaGATGGTCAGCTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: KTGNTSLTSNVPGHWVTALCWRM*MVSWCW
Trigger: CCAGCACCAGCTGACCATGCACATTCGCCAGCACAA...AGCAGTGACCCAGTGACCAGGCACATTACTCGTGAGCGAGGTATTCCCAGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTACCAGGCCTGAGAAATaGGAGGAAACTTCCTACAGG +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSTRPEK*EETSYR
Trigger: CCTGTAGGAAGTTTCCTCGCATTTCTCAGGCCTGGT...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp CTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACACAGACAAAACGGTGTTaGTCGCTGATGCACCTCCGC +
Preference number: 4 (lower is better)
Translates to: LDHAWEDCSRPLLNSAVTQTKRC*SLMHLR
Trigger: GCGGAGGTGCATCAGCGAGCAACACCGTTTTGTCTG...TGTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp CACAGCTGGGTAAGGCTTGGATTAGGCTTAGCAGGAAGACTGGGAATACCTCGCACATGGGTCTGCTTGTaGAGAGCCAGTGAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: HSWVRLGLGLAGRLGIPRTWVCL*RASEQS
Trigger: GCTCTGCTCACTGGCTCTGCACAAGCAGACCCATGT...GCGAGGTATTCCCAGTCTTCCTGCTAAGCCTAATCCAAGCCTTACCCAGCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGCCGCCACATGGGTCTaGTTGTGCAGAGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEAATWV*LCRASE
Trigger: CTCACTGGCTCTGCACAAGCAGACCCATGTGGCGGC...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp CTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACATTCTTGACCCTGGTCTaGCGCCACATGGGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: LDHAWEDCSRPLLNSAVTFLTLV*RHMGLL
Trigger: AAGCAGACCCATGTGGCGGCAGACCAGGGTCAAGAA...TGTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AAGACTGGGAATACCTCGCTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTGGCTGCAGGGACAGGTaGTTTATGCTGTCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: KTGNTSLTSNVPGHWVTAGCRDR*FMLSLV
Trigger: GACCAAGGACAGCATAAAGCACCTGTCCCTGCAGCC...AGCAGTGACCCAGTGACCAGGCACATTACTCGTGAGCGAGGTATTCCCAGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGCTGCAGGGACAGGTaGTTTATGCTGTCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSGCRDR*FMLSLV
Trigger: GACCAAGGACAGCATAAAGCACCTGTCCCTGCAGCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCCTCTGTGATCTCCTaGTTGATCTTGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLPSVIS*LILASM
Trigger: CATGGAGGCCAAGATCAAGCAGGAGATCACAGAGGG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp TGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCCCTCTGTGATCTCCTaGTTGATCTTGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: CFAFSKVISAVLQARPWLPSVIS*LILASM
Trigger: CATGGAGGCCAAGATCAAGCAGGAGATCACAGAGGG...AAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTAGTCGCAGATGTTaGACTGGTATGGCGAGATGC +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLCSRRC*TGMARC
Trigger: GCATCTCGCCATACCAGTGCAACATCTGCGACTACA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp CTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGCTGCTGTAGTCGCAGATGTTaGACTGGTATGGCGAGATGC +
Preference number: 4 (lower is better)
Translates to: LDACSLDACILTPPSLSCCSRRC*TGMARC
Trigger: GCATCTCGCCATACCAGTGCAACATCTGCGACTACA...GCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAAGGCCGCGGCCGCAGTaGGTGCGCATGTGGATGCGC +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSRPRPQ*VRMWMR
Trigger: GCGCATCCACATGCGCACGCACTGCGGCCGCGGCCT...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTACGGCGCTGCACTCCTTaGACTCGAAGGGCTTGCGGC +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLRRCTP*TRRACG
Trigger: GCCGCAAGCCCTTCGAGTGCAAGGAGTGCAGCGCCG...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGGACGCAGCAAGGCTGTaGCACTCAGGAGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWDAARL*HSGGLS
Trigger: GCTCAGCCCTCCTGAGTGGCACAGCCTTGCTGCGTC...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGAAGCCGTGGTGTTACTaGCAGTGCTTGCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEKPWCY*QCLRAL
Trigger: CAGGGCCCGCAAGCACTGGCAGTAACACCACGGCTT...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGGCGAACCAGGCTGTaGTTCAAGGTGAAGGTTCGC +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSWRTRL*FKVKVR
Trigger: GCGAACCTTCACCTTGAAGCACAGCCTGGTTCGCCA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp AAGACTGGGAATACCTCGCTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTCCGTGGTGTTTGGCATaGCTGGCTTTCTGGTGGATC +
Preference number: 4 (lower is better)
Translates to: KTGNTSLTSNVPGHWVTAPWCLA*LAFWWI
Trigger: GATCCACCAGAAAGCCAGGCATGCCAAACACCACGG...AGCAGTGACCCAGTGACCAGGCACATTACTCGTGAGCGAGGTATTCCCAGTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGTCACAGAACAAACGGTaGTATCACAGATTCACAAGA +
Preference number: 4 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVSQNKR*YHRFTR
Trigger: TCTTGTGAATCTGTGATAGCACCGTTTGTTCTGTGA...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGCTCTCCTCAGTGCCATaGTCCTCCTCCGGCTCATGG +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAELSSVP*SSSGSW
Trigger: CCATGAGCCGGAGGAGGAGCATGGCACTGAGGAGAG...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGCGTCGGCGTCCCCAGTaGTCTCCTCAGTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWRRRPQ*SPQCHA
Trigger: AGCATGGCACTGAGGAGAGCACTGGGGACGCCGACG...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTTGTTGCACACGCTaGAGACCTTCTTCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLACCTR*RPSSSC
Trigger: ACAAGAGGAAGAAGGTCTGCAGCGTGTGCAACAAGC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACCAGAACCGCTTGTTaGACACGCTGCAGACCTTCT +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLTRTAC*TRCRPS
Trigger: AGAAGGTCTGCAGCGTGTGCAACAAGCGGTTCTGGT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTCCCTGGATGCATaGATCCTCACTCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLCSLDA*ILTPPS
Trigger: AGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGAAGTCATCTCTGCAGTaGTCCAGGCACGGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEKSSLQ*SRHGPG
Trigger: GCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTT...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTATAACCCTGCCTTTTTaGATCCAGGGGTGTGGGCTA +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSITLPF*IQGCGL
Trigger: TAGCCCACACCCCTGGATGCAAAAAGGCAGGGTTAT...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGACCAGGAGCTCAGGTaGAGTGGGGTACATTCTCCT +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSDQELR*SGVHSP
Trigger: AGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAATCCGATTTGGTCCTaGAGGCTTCGAGGGGGACTT +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLNPIWS*RLRGGL
Trigger: AAGTCCCCCTCGAAGCCTCCAGGACCAAATCGGATT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACTCTGCCAATCCGATTTaGTCCTGGAGGCTTCGAGGG +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDSANPI*SWRLRG
Trigger: CCCTCGAAGCCTCCAGGACCAAATCGGATTGGCAGA...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCATGTGCATGGTCAGCTaGTGCTGGGTAGTGCAAATC +
Preference number: 4 (lower is better)
Translates to: ALLSPKSSLQCSRHGPGFMCMVS*CWVVQI
Trigger: GATTTGCACTACCCAGCACCAGCTGACCATGCACAT...GAAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATGCTGCTGTCAGGCTaGATGATGAAGCCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLMLLSG*MMKPFW
Trigger: CCAGAAGGGCTTCATCATCCAGCCTGACAGCAGCAT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp CTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATGTCTGCCAGCTCGATaGCCGACTCGCCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: LTSNVPGHWVTALLSPKSCLPAR*PTRQRW
Trigger: CCATCTCTGGCGAGTCGGCCATCGAGCTGGCAGACA...TGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTATTGGACTGCAGCAGGTaGGCGTTGGAGGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLLDCSR*ALEAAS
Trigger: GGAGGCGGCCTCCAACGCCCACCTGCTGCAGTCCAA...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAGAGCACCTTGCGCATaGCGGGCGTCTTCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWRAPCA*RASSCR
Trigger: GCGGCAAGAAGACGCCCGCCATGCGCAAGGTGCTCT...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGGGCGAGATGCCCAGGTaGGAGCGCACGTGGGCACGC +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMGEMPR*ERTWAR
Trigger: GCGTGCCCACGTGCGCTCCCACCTGGGCATCTCGCC...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACTCGCAGATGTTGCACTaGTATGGCGAGATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDSQMLH*YGEMPR
Trigger: CCTGGGCATCTCGCCATACCAGTGCAACATCTGCGA...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACAGATGAGATGATCTaGGCAATGGAGGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSTDEMI*AMEASG
Trigger: CCCGCTGGCCTCCATTGCCCAGATCATCTCATCTGT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGCTGGGTCCGCCACCTTaGTTTTCAGCAGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWLGPPP*FSAGWG
Trigger: CCCCCACCCTGCTGAAAACCAAGGTGGCGGACCCAG...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGAGTGCTTGCGGGCCCTaGGTCCGCCACCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAESACGP*VRHLGF
Trigger: AAAACCAAGGTGGCGGACCCAGGGCCCGCAAGCACT...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTCAGCGGGGGTGGCGGTaGTGGCGGCTTTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTAQRGWR*WRLWGQ
Trigger: CTGTCCCCAAAGCCGCCACCACCGCCACCCCCGCTG...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGCAGCGGGGGTGGCGGTaGTGGCGGCTTTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMQRGWR*WRLWGQ
Trigger: CTGTCCCCAAAGCCGCCACCACCGCCACCCCCGCTG...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGCTCTGGGCTGCTGGCTaGAGCGGGAGGCTCACTAGA +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWLWAAG*SGRLTR
Trigger: TCTAGTGAGCCTCCCGCTCCAGCCAGCAGCCCAGAG...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAGGGAGAGGCAGCCTCTaGGCTGCTGGCTGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSGRGSL*AAGWSG
Trigger: CCCGCTCCAGCCAGCAGCCCAGAGGCTGCCTCTCCC...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TGGCTTCTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGTGTTGGTGTCTGTGGTaGCCAGCATCTTCTCGATGC +
Preference number: 4 (lower is better)
Translates to: WLLDACSLDACILTPPSLCWCLW*PASSRC
Trigger: GCATCGAGAAGATGCTGGCCACCACAGACACCAACA...CAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAGAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACTTGTTGGTGTCTGTaGTGGCCAGCATCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSTCWCL*WPASSR
Trigger: TCGAGAAGATGCTGGCCACCACAGACACCAACAAGT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCATCACTGGGCCCATGGTaGTCGGCAGGGGCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSSLGPW*SAGAPA
Trigger: GGCCGGAGCCCCTGCCGACCACCATGGGCCCAGTGA...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCTCACTGGGCCCATGGTaGTCGGCAGGGGCTCCGGCC +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHISLGPW*SAGAPA
Trigger: GGCCGGAGCCCCTGCCGACCACCATGGGCCCAGTGA...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTACGAGTTCCGCTTaGCCCTCAGCAGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLCTSSA*PSAACL
Trigger: AAGACAAGCTGCTGAGGGCCAAGCGGAACTCGTACA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGTCTTCTGCAGGCAGTTaGTGTACGAGTTCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRSSAGS*CTSSAW
Trigger: CCAAGCGGAACTCGTACACCAACTGCCTGCAGAAGA...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCCGTGTTTGCGCAACTaGTGGCGTTCACAGTTAGAT +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSPCLRN*WRSQLD
Trigger: ATCTAACTGTGAACGCCACCAGTTGCGCAAACACGG...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334984.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGTGGTGGATCCGCTGGTaGCGAACCAGGCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEWWIRW*RTRLCF
Trigger: GAAGCACAGCCTGGTTCGCCACCAGCGGATCCACCA...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACGGTGTTTGGCATGCCTaGCTTTCTGGTGGATCCGCT +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDGVWHA*LSGGSA
Trigger: AGCGGATCCACCAGAAAGCCAGGCATGCCAAACACC...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCGTTGTTGCCGCTGTaGGTGGACTCATTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSALLPL*VDSFSL
Trigger: CAGCGAGAATGAGTCCACCCACAGCGGCAACAACGC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAGTCCTTGGTGGCACTaGCCAAGCCCTCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWSPWWH*PSPPSG
Trigger: GCCGGAAGGAGGGCTTGGCCAGTGCCACCAAGGACT...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCAATCGGCACGGGCTGTaGCCTCCCGCGCAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHINRHGL*PPAQAA
Trigger: CGCAGCCTGCGCGGGAGGCCACAGCCCGTGCCGATT...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAAATCGGCACGGGCTGTaGCCTCCCGCGCAGGCTGCG +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSNRHGL*PPAQAA
Trigger: CGCAGCCTGCGCGGGAGGCCACAGCCCGTGCCGATT...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTTTTCTTCCAGTTATTaGCTATGGGTACCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLFSSSY*LWVPKG
Trigger: ACCCTTGGGTACCCATAGCCAATAACTGGAAGAAAA...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTTCCAGGTCCAGGCTCTaGTTGCTCGACGCGTCCTCT +
Preference number: 4 (lower is better)
Translates to: MCLVTGSLLCFLQSHLCSSRSRL*LLDASS
Trigger: AGAGGACGCGTCGAGCAACCAGAGCCTGGACCTGGA...ACTGCAGAGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGGGGAGTCTGTCTTTaGTTTCTTGTCATCGTCGCT +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSGGVCL*FLVIVA
Trigger: AGCGACGATGACAAGAAACCAAAGACAGACTCCCCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCTTGATGCCTGTTCCCTaGATGCATGCATCCTCACTC +
Preference number: 4 (lower is better)
Translates to: ALLSPKSSLQCSRHGPGFLMPVP*MHASSL
Trigger: GAGTGAGGATGCATGCATCCAGGGAACAGGCATCAA...GAAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGCAGCAGCAGGCTGGCTaGGGACCCCTGAGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLQQQAG*GPLRSW
Trigger: CCAAGACCTCAGGGGTCCCCAGCCAGCCTGCTGCTG...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTAAAGGAGGAGCACTaGGGCCAGAAAAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSVKEEH*GQKRPG
Trigger: CCCTGGCCTTTTCTGGCCCCAGTGCTCCTCCTTTAC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACCAGAAACTGGTGAAGTaGCGGAGAAAAGGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDQKLVK*RRKGGV
Trigger: CACGCCCCCTTTTCTCCGCCACTTCACCAGTTTCTG...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGCTACACACGTCGCTaGGAGCTGATTACTGCTACA +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSSYTRR*ELITAT
Trigger: TGTAGCAGTAATCAGCTCCCAGCGACGTGTGTAGCT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR TCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCGACATCATGGTGTTaGTGGAAGATAGGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLPTSWC*WKIGLN
Trigger: GTTCAGACCTATCTTCCATCAACACCATGATGTCGG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp CTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGCTGCCCGACATCATGGTGTTaGTGGAAGATAGGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: LDACSLDACILTPPSLSCPTSWC*WKIGLN
Trigger: GTTCAGACCTATCTTCCATCAACACCATGATGTCGG...GCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTCCCTACACTCATaGCCGCCGACATCATGGTGT +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSPSLHS*PPTSWC
Trigger: ACACCATGATGTCGGCGGTCATGAGTGTAGGGAAGG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp AAGACTGGGAATACCTCGCTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTCCCATTGGTGGTAAATaGCTGGCCACACACAGTGCA +
Preference number: 4 (lower is better)
Translates to: KTGNTSLTSNVPGHWVTAPIGGK*LATHSA
Trigger: TGCACTGTGTGTGGCCAGTCATTTACCACCAATGGG...AGCAGTGACCCAGTGACCAGGCACATTACTCGTGAGCGAGGTATTCCCAGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCATTGGTGGTAAATaGCTGGCCACACACAGTGCA +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSPIGGK*LATHSA
Trigger: TGCACTGTGTGTGGCCAGTCATTTACCACCAATGGG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACCCCATTGGTGGTAAATaGCTGGCCACACACAGTGCA +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDPIGGK*LATHSA
Trigger: TGCACTGTGTGTGGCCAGTCATTTACCACCAATGGG...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp TGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTTTGAGTGTCTGGAGCTaGATTGCCTGGTTGTCATCC +
Preference number: 4 (lower is better)
Translates to: CFAFSKVISAVLQARPWLLSVWS*IAWLSS
Trigger: GGATGACAACCAGGCAATTCAGCTCCAGACACTCAA...AAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGAGGTAGCTGACACTTaGGTGTCTGGAGCTGAATTG +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLEVADT*VSGAEL
Trigger: CAATTCAGCTCCAGACACTCAAGTGTCAGCTACCTC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp CCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACGAGGTAGCTGACACTTaGGTGTCTGGAGCTGAATTG +
Preference number: 4 (lower is better)
Translates to: PGPCLGRLLTAPSKFCSDEVADT*VSGAEL
Trigger: CAATTCAGCTCCAGACACTCAAGTGTCAGCTACCTC...GTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTATTGGGACCGCCAGCTaGACAGGGCCCTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTAIGTAS*TGPCRG
Trigger: GCCCCTGCAGGGCCCTGTTCAGCTGGCGGTCCCAAT...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGATTGGGACCGCCAGCTaGACAGGGCCCTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMIGTAS*TGPCRG
Trigger: GCCCCTGCAGGGCCCTGTTCAGCTGGCGGTCCCAAT...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTAGCTGCTGACCAGGGCTaGGGAGTAGATTGGGACCGC +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLAADQG*GVDWDR
Trigger: GCGGTCCCAATCTACTCCTCAGCCCTGGTCAGCAGC...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGGATACAGATGAGATaGTCTGGGCAATGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLRIQMR*SGQWRP
Trigger: TGGCCTCCATTGCCCAGATCATCTCATCTGTATCCT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGAGGATACAGATGAGATaGTCTGGGCAATGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRRIQMR*SGQWRP
Trigger: TGGCCTCCATTGCCCAGATCATCTCATCTGTATCCT...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGCCGAGGATACAGATaGGATGATCTGGGCAATGGA +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSGRGYR*DDLGNG
Trigger: TCCATTGCCCAGATCATCTCATCTGTATCCTCGGCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCAGAAACGGACTaGACTTGTTGGTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLSAETD*TCWCLW
Trigger: CCACAGACACCAACAAGTTCAGTCCGTTTCTGCAGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGCCGGCCACCTCATCCTaGGTGTTGTCCTCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLPATSS*VLSSAV
Trigger: GACAGCGGAGGACAACACTCAGGATGAGGTGGCCGG...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACCAAGGGAAGGGTTTCTaGCCAGTGTGTGTGAGCATG +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDQGKGF*PVCVSM
Trigger: CATGCTCACACACACTGGTCAGAAACCCTTCCCTTG...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334984.10
ENST00000379938.7
CDS-3UTR TCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTCGCTCGCAGGTCTaGCATTTGTATGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSVRSQV*HLYGLS
Trigger: GGAAAGGCCATACAAATGTCAGACCTGCGAGCGAAC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGCTCAGCCTCGTTCTCTaGGACGGCGTTGTTGCCGCT +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWLSLVL*DGVVAA
Trigger: AGCGGCAACAACGCCGTCTCAGAGAACGAGGCTGAG...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGCTCTGTCCCGTGAGGTaGGGTCTAGCACTTCGCCCG +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLLCPVR*GLALRP
Trigger: CGGGCGAAGTGCTAGACCTCACCTCACGGGACAGAG...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp CCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACGATTTCAGAAACTGGTaGAGTGGCGGAGAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: PGPCLGRLLTAPSKFCSDDFRNW*SGGEKG
Trigger: CCCCTTTTCTCCGCCACTTCACCAGTTTCTGAAATC...GTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGTCAGAACGCATGGTaGATCTTCCAAAACTGGCAT +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSGQNAW*IFQNWH
Trigger: ATGCCAGTTTTGGAAGATTCACCATGCGTTCTGACC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR GCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTTTTCCTGGTTCCTTCTaGCAATCCGATTTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSFPGSF*QSDLVL
Trigger: CAGGACCAAATCGGATTGGCAGAAGGAACCAGGAAA...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGTTTCCTGGTTCCTTCTaGCAATCCGATTTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLFPGSF*QSDLVL
Trigger: CAGGACCAAATCGGATTGGCAGAAGGAACCAGGAAA...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTGTGCTGGCGAATGTaGATGGTCAGCTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSLCWRM*MVSWCW
Trigger: CCAGCACCAGCTGACCATGCACATTCGCCAGCACAA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTGAAAGGTCTGCCCATTaGATCCCTGGGAAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSERSAH*IPGKLF
Trigger: AAACAACTTCCCAGGGATGCAATGGGCAGACCTTTC...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTCTGGAGCTGAATTaGCTGGTTGTCATCCGGCAG +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSCLELN*LVVIRQ
Trigger: CTGCCGGATGACAACCAGGCAATTCAGCTCCAGACA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTCTGGAAGGGCTaGAGGGACAGGTGCTTTATG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSPFWKG*RDRCFM
Trigger: CATAAAGCACCTGTCCCTGCAGCCCTTCCAGAAGGG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGGGGGAGCCGAGGCTaGCATCTTCAGAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSRGSRG*HLQNLL
Trigger: CAGCAAATTCTGAAGATGGCAGCCTCGGCTCCCCCT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAGGGGTAGAGCACCTTaGGCATGGCGGGCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWRGRAP*AWRASS
Trigger: AGAAGACGCCCGCCATGCGCAAGGTGCTCTACCCCT...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGACTGGTATGGCGAGATaGCCAGGTGGGAGCGCACGT +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWTGMAR*PGGSAR
Trigger: ACGTGCGCTCCCACCTGGGCATCTCGCCATACCAGT...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTAGTCGCAGATGTTaGACTGGTATGGCGAGATGC +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLCSRRC*TGMARC
Trigger: GCATCTCGCCATACCAGTGCAACATCTGCGACTACA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGGCGTGCGCATGTGGATaGGCAGGGCACGATAGTGCT +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWACACG*AGHDSA
Trigger: AGCACTATCGTGCCCTGCGCATCCACATGCGCACGC...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGTGTGGTGGATGCAGTTaGGCTTGGCCGCGAACGCGG +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLCGGCS*AWPRTR
Trigger: CCGCGTTCGCGGCCAAGCGCAACTGCATCCACCACA...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGCCCTCTTCTTCGACGTaGCCGCTGGGCCCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMPSSST*PLGPAR
Trigger: CCGAGCAGGGCCCAGCGGGCACGTCGAAGAAGAGGG...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGCCAGCATCTTCTCGATaGTGGCAAACTCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEPASSR*WQTPRW
Trigger: CCAGCGGGGAGTTTGCCAGCATCGAGAAGATGCTGG...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTCTTCTGGGGGACTaGCCTGCTCTTCATCACTGG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSCLLGD*PALHHW
Trigger: CCAGTGATGAAGAGCAGGGCAGTCCCCCAGAAGACA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGACAGGTGATCTTCTaGAGGCAGTTGGTGTACGAG +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSGQVIF*RQLVYE
Trigger: CTCGTACACCAACTGCCTGCAGAAGATCACCTGTCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGTGTGTGTGAGCATGTaGCTCTGTAGGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEVCVSM*LCRELA
Trigger: GGCCAGCTCCCTACAGAGGCACATGCTCACACACAC...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGGGTGGGCAGGCCTCTTaGTGCGCGGCTCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMGGQAS*CAAPAG
Trigger: ACCTGCTGGAGCCGCGCAGCAAGAGGCCTGCCCACC...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGCTCTCCTCAGTGCCATaGTCCTCCTCCGGCTCATGG +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWLSSVP*SSSGSW
Trigger: CCATGAGCCGGAGGAGGAGCATGGCACTGAGGAGAG...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGGCCCCTCCTCTGCAGTaGTGGCGCCATCTCCCTTCT +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLAPPLQ*WRHLPS
Trigger: AGAAGGGAGATGGCGCCAGCACTGCAGAGGAGGGGC...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCCTGGGGCCCCTCCTCTaGAGTGCTGGCGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHILGPLL*SAGAIS
Trigger: GGAGATGGCGCCAGCACTGCAGAGGAGGGGCCCCAG...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCACTGGGGCCCCTCCTCTaGAGTGCTGGCGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSLGPLL*SAGAIS
Trigger: GGAGATGGCGCCAGCACTGCAGAGGAGGGGCCCCAG...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTCTTCCTCTTGTCTaGCTTGCTGGCCACGCTTTT +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLLLPLV*LAGHAF
Trigger: AAAAGCGTGGCCAGCAAGGCAGACAAGAGGAAGAAG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGCTTCTTCCTCTTGTCTaGCTTGCTGGCCACGCTTTT +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRLLPLV*LAGHAF
Trigger: AAAAGCGTGGCCAGCAAGGCAGACAAGAGGAAGAAG...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGCATGCTTGGGAAGACTaGTCACGGCCCCTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRHAWED*SRPLLN
Trigger: ATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATG...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGAGAAAAGGGGGCGTaGACGTTTCTGTGTGAACAA +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLGEKGA*TFLCEQ
Trigger: TTGTTCACACAGAAACGTGCACGCCCCCTTTTCTCC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCTCTTTCGTTTCCTaGTTCCTTCTGCCAATCCGA +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSSSFVS*FLLPIR
Trigger: TCGGATTGGCAGAAGGAACCAGGAAACGAAAGAGGA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGATGCTGCATGAGTaGTCGGCTCCTCCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSQMLHE*SAPPVS
Trigger: AGACACTGGAGGAGCCGACCACTCATGCAGCATCTG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGACTCAGTTTCCTCTTaGAGGACAATCGCCTACGTT +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSDSVSS*RTIAYV
Trigger: AACGTAGGCGATTGTCCTCCAAGAGGAAACTGAGTC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTGACTCAGTTTCCTCTTaGAGGACAATCGCCTACGTT +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSDSVSS*RTIAYV
Trigger: AACGTAGGCGATTGTCCTCCAAGAGGAAACTGAGTC...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp AAGACTGGGAATACCTCGCTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTGCTGCTTGAGGATGTaGTGGATGCAGTTGCGCTTG +
Preference number: 4 (lower is better)
Translates to: KTGNTSLTSNVPGHWVTACCLRM*WMQLRL
Trigger: CAAGCGCAACTGCATCCACCACATCCTCAAGCAGCA...AGCAGTGACCCAGTGACCAGGCACATTACTCGTGAGCGAGGTATTCCCAGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAACTTGATCGAGACATaGGGAGGTGGAGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSNLIET*GGGGWV
Trigger: CACCCAGCCTCCACCTCCCCATGTCTCGATCAAGTT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTGGGCTTGGGCCGCAGTaGACGCAGCAAGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTAGLGPQ*TQQGCA
Trigger: GGCACAGCCTTGCTGCGTCCACTGCGGCCCAAGCCC...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CACAGCTGGGTAAGGCTTGGATTAGGCTTAGCAGGAAGACTGGGAATACCTCGCAGCTGTCTGAAGCCGTaGTGTTACTGCCAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: HSWVRLGLGLAGRLGIPRSCLKP*CYCQCL
Trigger: CAAGCACTGGCAGTAACACCACGGCTTCAGACAGCT...GCGAGGTATTCCCAGTCTTCCTGCTAAGCCTAATCCAAGCCTTACCCAGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGCGGTGGTGGCGGCTTTaGGGACAGAACCTCCTAAGC +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWRWWRL*GQNLLS
Trigger: GCTTAGGAGGTTCTGTCCCCAAAGCCGCCACCACCG...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTTGTTGGTGTCTGTaGTGGCCAGCATCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLTCWCL*WPASSR
Trigger: TCGAGAAGATGCTGGCCACCACAGACACCAACAAGT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCGTGTTTGCGCAACTaGTGGCGTTCACAGTTAGAT +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLPCLRN*WRSQLD
Trigger: ATCTAACTGTGAACGCCACCAGTTGCGCAAACACGG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334984.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCCCTGTGCTATCATaGGATCCAACATCACTCTCT +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSSPVLS*DPTSLS
Trigger: AGAGAGTGATGTTGGATCCCATGATAGCACAGGGGA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334984.10
CDS-3UTR CCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGTGTGGTTGCTGGCATTaGGAGCCAGCTCAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAECGCWH*EPAQPR
Trigger: ACGAGGCTGAGCTGGCTCCCAATGCCAGCAACCACA...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGCAGCCATGTGGTTGCTaGCATTGGGAGCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEQPCGC*HWEPAQ
Trigger: CTGAGCTGGCTCCCAATGCCAGCAACCACATGGCTG...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGGGGTTAAGGTCACCCTaGCCAGGCTCAGACGGCCAC +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLGLRSP*PGSDGH
Trigger: GTGGCCGTCTGAGCCTGGCCAGGGTGACCTTAACCC...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCCGTGCGCCTTCCGGTaGCGGCTCAGGGTGCCCAGG +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFPCAFR*RLRVPR
Trigger: CCTGGGCACCCTGAGCCGCCACCGGAAGGCGCACGG...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATTCGTCCTTGGGCTCCTaGCGGCCGTGCGCCTTCCGG +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHSSLGS*RPCAFR
Trigger: CCGGAAGGCGCACGGCCGCCAGGAGCCCAAGGACGA...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGCTCCCTTCTCGTCCTTaGGCTCCTGGCGGCCGTGCG +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMLPSRP*APGGRA
Trigger: CGCACGGCCGCCAGGAGCCCAAGGACGAGAAGGGAG...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCTGTTCAGGGGCGGGCTaGGGCCCCTCCTCTGCAGTG +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHICSGAG*GPSSAV
Trigger: CACTGCAGAGGAGGGGCCCCAGCCCGCCCCTGAACA...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGTCTGACATTTGTATaGCCTTTCCCCTGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLGLTFV*PFPCVG
Trigger: TCCCACACAGGGGAAAGGCCATACAAATGTCAGACC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGTTGATGCCTGTTCCCTaGATGCATGCATCCTCACTC +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRLMPVP*MHASSL
Trigger: GAGTGAGGATGCATGCATCCAGGGAACAGGCATCAA...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp TGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCCGACATCATGGTGTTaGTGGAAGATAGGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: CFAFSKVISAVLQARPWLPTSWC*WKIGLN
Trigger: GTTCAGACCTATCTTCCATCAACACCATGATGTCGG...AAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTATCCGCAGATGCTGCATaGGTGGTCGGCTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLSADAA*VVGSSS
Trigger: ACTGGAGGAGCCGACCACTCATGCAGCATCTGCGGA...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTGACTCGGCATCGTaGCTCAGTTTCCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSSDSAS*LSFLLE
Trigger: CTCCAAGAGGAAACTGAGTCACGATGCCGAGTCAGA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCCAAGTCACCTaGCTGCCCGTCTTCTACCAT +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSLLQVT*LPVFYH
Trigger: ATGGTAGAAGACGGGCAGTCAGGTGACTTGGAGAAG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp CACAGCTGGGTAAGGCTTGGATTAGGCTTAGCAGGAAGACTGGGAATACCTCGCTACAGGAGAAGTCCGTaGATCCTAAGTCGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: HSWVRLGLGLAGRLGIPRYRRSP*ILSRGS
Trigger: GCTTCCACGACTTAGGATTCACGGACTTCTCCTGTA...GCGAGGTATTCCCAGTCTTCCTGCTAAGCCTAATCCAAGCCTTACCCAGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTGAGTGTCTGGAGCTaGATTGCCTGGTTGTCATCC +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSLSVWS*IAWLSS
Trigger: GGATGACAACCAGGCAATTCAGCTCCAGACACTCAA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp CTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCAAGCAGCTTCGAAAGGTaGCAGGCTCAGCAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: LTSNVPGHWVTALLSPKSSSFER*QAQQVG
Trigger: ACCAACCTGCTGAGCCTGTCACCTTTCGAAGCTGCT...TGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAATGCGCAGGTGGCGGATaGGCGCGGCCTTGTCGGCGG +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKCAGGG*ARPCRR
Trigger: CCGCCGACAAGGCCGCGCTCATCCGCCACCTGCGCA...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp CTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCAAGTCCAGGGGCTCATTaGAGTCCACCGCAAAGCTAC +
Preference number: 4 (lower is better)
Translates to: LTSNVPGHWVTALLSPKSSPGAH*SPPQSY
Trigger: GTAGCTTTGCGGTGGACTTCAATGAGCCCCTGGACT...TGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGCCGAGGATACAGATaGGATGATCTGGGCAATGGA +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSGRGYR*DDLGNG
Trigger: TCCATTGCCCAGATCATCTCATCTGTATCCTCGGCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGAACATCACTCTCTTTTaGCTGGGGGATAAGCCCGTT +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRNITLF*LGDKPV
Trigger: AACGGGCTTATCCCCCAGTCAAAAGAGAGTGATGTT...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334984.10
ENST00000379938.7
CDS-3UTR TCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTCGCTCGCAGGTCTaGCATTTGTATGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSVRSQV*HLYGLS
Trigger: GGAAAGGCCATACAAATGTCAGACCTGCGAGCGAAC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTGAGGAAACCCCATaGAGTATAGACGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLTEETP*SIDALL
Trigger: GAGCAAAGCGTCTATACTTCATGGGGTTTCCTCAGT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACACAGCCAAAGGGCACTaGGGAAACCCCATGAAGTAT +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDTAKGH*GNPMKY
Trigger: ATACTTCATGGGGTTTCCTCAGTGCCCTTTGGCTGT...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTTCCCTGGTTTTGGCCTaGAACCATATTGGAAACCTT +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSSLVLA*NHIGNL
Trigger: AAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGA...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCCTGGTTTTGGCCTaGAACCATATTGGAAACCTT +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSSLVLA*NHIGNL
Trigger: AAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTATCACTCCACCCTCTCTaGGCTGCTCCTGGACCATGC +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLSLHPL*AAPGPC
Trigger: GCATGGTCCAGGAGCAGCTCAGAGAGGGTGGAGTGA...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTATATCTATCTTCCTGTaGAGTCTGGGAGGTTGGATT +
Preference number: 4 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSISIFL*SLGGWI
Trigger: AATCCAACCTCCCAGACTTCACAGGAAGATAGATAT...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCCTGGTTCCTTCTaGCAATCCGATTTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLFPGSF*QSDLVL
Trigger: CAGGACCAAATCGGATTGGCAGAAGGAACCAGGAAA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp CTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATTGTGCTGGCGAATGTaGATGGTCAGCTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: LTSNVPGHWVTALLSPKSLCWRM*MVSWCW
Trigger: CCAGCACCAGCTGACCATGCACATTCGCCAGCACAA...TGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp TGGCTTCTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGTCCAAGTCACCTGACTaGCCGTCTTCTACCATCTTT +
Preference number: 4 (lower is better)
Translates to: WLLDACSLDACILTPPSLSKSPD*PSSTIF
Trigger: AAAGATGGTAGAAGACGGGCAGTCAGGTGACTTGGA...CAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAGAAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp CCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACGAAAGGTCTGCCCATTaGATCCCTGGGAAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: PGPCLGRLLTAPSKFCSDERSAH*IPGKLF
Trigger: AAACAACTTCCCAGGGATGCAATGGGCAGACCTTTC...GTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACCAGGCCTGAGAAATaGGAGGAAACTTCCTACAGG +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSTRPEK*EETSYR
Trigger: CCTGTAGGAAGTTTCCTCGCATTTCTCAGGCCTGGT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGCAGACAAAACGGTGTTaGTCGCTGATGCACCTCCGC +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEQTKRC*SLMHLR
Trigger: GCGGAGGTGCATCAGCGAGCAACACCGTTTTGTCTG...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGACATGGGTCTGCTTGTaGAGAGCCAGTGAGCAGAGC +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAETWVCL*RASEQS
Trigger: GCTCTGCTCACTGGCTCTGCACAAGCAGACCCATGT...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTCTGGAGCTGAATTaGCTGGTTGTCATCCGGCAG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSCLELN*LVVIRQ
Trigger: CTGCCGGATGACAACCAGGCAATTCAGCTCCAGACA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGCCCTTCTGGAAGGGCTaGAGGGACAGGTGCTTTATG +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEPFWKG*RDRCFM
Trigger: CATAAAGCACCTGTCCCTGCAGCCCTTCCAGAAGGG...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AAGACTGGGAATACCTCGCTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTGCCATCTTCAGAATTTaGTGGATGTCTGCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: KTGNTSLTSNVPGHWVTAAIFRI*WMSASS
Trigger: CGAGCTGGCAGACATCCAGCAAATTCTGAAGATGGC...AGCAGTGACCCAGTGACCAGGCACATTACTCGTGAGCGAGGTATTCCCAGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACGCCATCTTCAGAATTTaGTGGATGTCTGCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDAIFRI*WMSASS
Trigger: CGAGCTGGCAGACATCCAGCAAATTCTGAAGATGGC...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCACAGCCCGGGGAAGCCTaGTGGGCGTTGATGAGAGGC +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSQPGEA*WALMRG
Trigger: GCCTCTCATCAACGCCCAGCAGGCTTCCCCGGGCTG...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGCTGTCCTGCTCCAGCTaGGTCTTCATCTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWLSCSS*VFISGW
Trigger: CCAGCCTGAGATGAAGACGCAGCTGGAGCAGGACAG...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTGTGATCTCCTaGTTGATCTTGGCCTCCATG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSPSVIS*LILASM
Trigger: CATGGAGGCCAAGATCAAGCAGGAGATCACAGAGGG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp ATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTAGGCAAACACCTGGTTaGAGAAGCGGCAGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: MCLVTGSLLCFLQSHLCSRQTPG*RSGRGR
Trigger: TCTACCCCTGCCGCTTCTGCAACCAGGTGTTTGCCT...ACTGCAGAGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGAGGCAAACACCTGGTTaGAGAAGCGGCAGGGGTAGA +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAERQTPG*RSGRGR
Trigger: TCTACCCCTGCCGCTTCTGCAACCAGGTGTTTGCCT...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGTCCTGCTCGGGCACGTaGAGGTGCTGCTTGAGGATG +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLSCSGT*RCCLRM
Trigger: CATCCTCAAGCAGCACCTGCACGTGCCCGAGCAGGA...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGAAGCCGTGGTGTTACTaGCAGTGCTTGCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLKPWCY*QCLRAL
Trigger: CAGGGCCCGCAAGCACTGGCAGTAACACCACGGCTT...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGGTGTGTGTGAGCATGTaGCTCTGTAGGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWVCVSM*LCRELA
Trigger: GGCCAGCTCCCTACAGAGGCACATGCTCACACACAC...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGCTGAGACGGCGTTGTTaGCGCTGTGGGTGGACTCAT +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWLRRRC*RCGWTH
Trigger: ATGAGTCCACCCACAGCGGCAACAACGCCGTCTCAG...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATGGGCAGGCCTCTTGCTaGGCGGCTCCAGCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHGQASC*AAPAGP
Trigger: AGGACCTGCTGGAGCCGCGCAGCAAGAGGCCTGCCC...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCGCCTCCCGCGCAGGCTaGGGTAAGGCTATGGCACTG +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHIASRAG*GKAMAL
Trigger: CAGTGCCATAGCCTTACCGCAGCCTGCGCGGGAGGC...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATGCGCCCTCCGACGGCTaGTCTCTGTCCCGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHAPSDG*SLSREV
Trigger: CACCTCACGGGACAGAGAGCAGCCGTCGGAGGGCGC...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCACACAGGCGCATCCCCTaGGACCTGGCGGAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSHRRIP*DLAELS
Trigger: ACTGAGCTCCGCCAGGTCGCAGGGGATGCGCCTGTG...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCTCTCCCCACGCCCGTaGTCTTCCCGGTGCACCGGC +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFLSPRP*SSRCTG
Trigger: GCCGGTGCACCGGGAAGAGCACGGGCGTGGGGAGAG...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTACTGGGTCACTGCTTTaGTTTCTCCAAAGTCATCTC +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSTGSLL*FLQSHL
Trigger: GAGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGT...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp ATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTCGCTCACGAGTAATGTaGCTGGTCACTGGGTCACTG +
Preference number: 4 (lower is better)
Translates to: MCLVTGSLLCFLQSHLCSRSRVM*LVTGSL
Trigger: CAGTGACCCAGTGACCAGGCACATTACTCGTGAGCG...ACTGCAGAGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTAGTAGTATTTCCTTaGTTTGCAAATGACAGTAGC +
Preference number: 4 (lower is better)
Translates to: GPGAQVQWGTFSSLQAETVVVFP*FANDSS
Trigger: GCTACTGTCATTTGCAAAGCAAGGAAATACTACTAC...TGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTATTGCCTGCACAGGATaGTCATGGGTAAAAATAACC +
Preference number: 4 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSIACTG*SWVKIT
Trigger: GGTTATTTTTACCCATGAGCATCCTGTGCAGGCAAT...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACGGGAAGTCTATTGCCTaGACAGGATGCTCATGGGTA +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDGKSIA*TGCSWV
Trigger: TACCCATGAGCATCCTGTGCAGGCAATAGACTTCCC...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACGTGAGGGAAGTCTATTaGCTGCACAGGATGCTCATG +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDVREVY*LHRMLM
Trigger: CATGAGCATCCTGTGCAGGCAATAGACTTCCCTCAC...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATGGGGCTGAACCTGGCTaGGCCCAAACGTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHGAEPG*AQTWAG
Trigger: CCCTGCCCACGTTTGGGCCCAGCCAGGTTCAGCCCC...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTTTCGTTTCCTaGTTCCTTCTGCCAATCCGA +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLSSFVS*FLLPIR
Trigger: TCGGATTGGCAGAAGGAACCAGGAAACGAAAGAGGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACATGTGCATGGTCAGCTaGTGCTGGGTAGTGCAAATC +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDMCMVS*CWVVQI
Trigger: GATTTGCACTACCCAGCACCAGCTGACCATGCACAT...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGGTGGTAAATGACTaGCCACACACAGTGCACTTG +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLLVVND*PHTVHL
Trigger: CAAGTGCACTGTGTGTGGCCAGTCATTTACCACCAA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGGTGGTAAATGACTaGCCACACACAGTGCACTTG +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLLVVND*PHTVHL
Trigger: CAAGTGCACTGTGTGTGGCCAGTCATTTACCACCAA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACAGTGGGTTATCTGAATaGGTCTCCATGTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDSGLSE*VSMWVS
Trigger: GGAGACCCACATGGAGACCCATTCAGATAACCCACT...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGTGCCCATTGCATCCCTaGGAAGTTGTTTGTGGACAA +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRCPLHP*EVVCGQ
Trigger: TTGTCCACAAACAACTTCCCAGGGATGCAATGGGCA...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCGAAGATCGCCTGCAGTaGGGCGGCAGGGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHIEDRLQ*GGRGLG
Trigger: TCCAAGGCCCCTGCCGCCCCACTGCAGGCGATCTTC...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAGAAGATCGCCTGCAGTaGGGCGGCAGGGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSEDRLQ*GGRGLG
Trigger: TCCAAGGCCCCTGCCGCCCCACTGCAGGCGATCTTC...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCGGCCACCACCGTCCGTaGTGTGACCAGGGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHIGHHRP*CDQGLW
Trigger: CCAAAGCCCCTGGTCACACCACGGACGGTGGTGGCC...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp CACCTCACTAATAAAATGTGGCAAGACCTTATTGACTACGAGGGTACAGATCAAGAGCTTCAGGGGCGGTaGCGGCAGGCTGGGGCTGAT +
Preference number: 4 (lower is better)
Translates to: HLTNKMWQDLIDYEGTDQELQGR*RQAGAD
Trigger: ATCAGCCCCAGCCTGCCGCCACCGCCCCTGAAGCTC...TTGATCTGTACCCTCGTAGTCAATAAGGTCTTGCCACATTTTATTAGTGAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR CCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGTTGGACTGCAGCAGGTaGGCGTTGGAGGCCGCCTCC +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMLDCSR*ALEAAS
Trigger: GGAGGCGGCCTCCAACGCCCACCTGCTGCAGTCCAA...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGGCTGGGTCCCGGACTTaGACTGCAGCAGGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMAGSRT*TAAGGR
Trigger: ACGCCCACCTGCTGCAGTCCAAGTCCGGGACCCAGC...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGCTGCTTGAGGATGTaGTGGATGCAGTTGCGCTTG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSCCLRM*WMQLRL
Trigger: CAAGCGCAACTGCATCCACCACATCCTCAAGCAGCA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp ATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTAACTTGATCGAGACATaGGGAGGTGGAGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: MCLVTGSLLCFLQSHLCSNLIET*GGGGWV
Trigger: CACCCAGCCTCCACCTCCCCATGTCTCGATCAAGTT...ACTGCAGAGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTTGGCTTCGCTGGGAGTaGCCAAATCCTTGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: MCLVTGSLLCFLQSHLCSWLRWE*PNPCPL
Trigger: AAGGGGACAAGGATTTGGCCACTCCCAGCGAAGCCA...ACTGCAGAGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGACAGATGAGATGATCTaGGCAATGGAGGCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAETDEMI*AMEASG
Trigger: CCCGCTGGCCTCCATTGCCCAGATCATCTCATCTGT...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCAGCGGGGGTGGCGGTaGTGGCGGCTTTGGGGACAG +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFQRGWR*WRLWGQ
Trigger: CTGTCCCCAAAGCCGCCACCACCGCCACCCCCGCTG...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCTGGGCCCTGCTCGGTaGGAGAGGCAGCCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFLGPAR*ERQPLG
Trigger: GCCCAGAGGCTGCCTCTCCCACCGAGCAGGGCCCAG...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTTGGTGTCTGTGGTaGCCAGCATCTTCTCGATGC +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSCWCLW*PASSRC
Trigger: GCATCGAGAAGATGCTGGCCACCACAGACACCAACA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACTTGTTGGTGTCTGTaGTGGCCAGCATCTTCTCGA +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSTCWCL*WPASSR
Trigger: TCGAGAAGATGCTGGCCACCACAGACACCAACAAGT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCTCATCACTGGGCCCATaGTGGTCGGCAGGGGCTCCG +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHISSLGP*WSAGAP
Trigger: CGGAGCCCCTGCCGACCACCATGGGCCCAGTGATGA...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGCCTGCTCTTCATCACTaGGCCCATGGTGGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLPALHH*AHGGRQ
Trigger: CTGCCGACCACCATGGGCCCAGTGATGAAGAGCAGG...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGAAAACCCGGGGACAGTaGGGACAGGTGATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEKTRGQ*GQVIFC
Trigger: GCAGAAGATCACCTGTCCCCACTGTCCCCGGGTTTT...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGGCATGCCTGGCTTTCTaGTGGATCCGCTGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLACLAF*WIRWWR
Trigger: TCGCCACCAGCGGATCCACCAGAAAGCCAGGCATGC...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGGTGTTTGGCATGCCTaGCTTTCTGGTGGATCCGCT +
Preference number: 4 (lower is better)
Translates to: MCLVTGSLLCFLQSHLCSGVWHA*LSGGSA
Trigger: AGCGGATCCACCAGAAAGCCAGGCATGCCAAACACC...ACTGCAGAGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATGGCCGCCGGGCTCTCTaGGTTAAGGTCACCCTGGCC +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHGRRAL*VKVTLA
Trigger: GGCCAGGGTGACCTTAACCCAGAGAGCCCGGCGGCC...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTGTGGCCAGGATTGGGTaGGCAGGCCTCTTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTAVARIG*AGLLLR
Trigger: GCGCAGCAAGAGGCCTGCCCACCCAATCCTGGCCAC...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGCTGGCCACGCTTTTaGGGGAGTCTGTCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSCWPRF*GSLSLV
Trigger: AACCAAAGACAGACTCCCCCAAAAGCGTGGCCAGCA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGTCTTGTCTGCCTTGCTaGCCACGCTTTTGGGGGAGT +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAESCLPC*PRFWGS
Trigger: ACTCCCCCAAAAGCGTGGCCAGCAAGGCAGACAAGA...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGCCTTCCCTACACTCATaGCCGCCGACATCATGGTGT +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWPSLHS*PPTSWC
Trigger: ACACCATGATGTCGGCGGTCATGAGTGTAGGGAAGG...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp ATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTCTTCTCCAAGTCACCTaGCTGCCCGTCTTCTACCAT +
Preference number: 4 (lower is better)
Translates to: MCLVTGSLLCFLQSHLCSLLQVT*LPVFYH
Trigger: ATGGTAGAAGACGGGCAGTCAGGTGACTTGGAGAAG...ACTGCAGAGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGCTTCTCCAAGTCACCTaGCTGCCCGTCTTCTACCAT +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAELLQVT*LPVFYH
Trigger: ATGGTAGAAGACGGGCAGTCAGGTGACTTGGAGAAG...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAACATACTGGGCAGTaGAAGACTTCATCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSKHTGQ*KTSSAF
Trigger: GAAAGCTGATGAAGTCTTTCACTGCCCAGTATGTTT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTTGCAAACAAACTCCTTaGAACATACTGGGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSCKQTP*NILGSE
Trigger: TTCACTGCCCAGTATGTTTCAAGGAGTTTGTTTGCA...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAGGGTTGTTCTGTATaGAAGGTCTGCCCATTGCAT +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLKGCSV*KVCPLH
Trigger: ATGCAATGGGCAGACCTTTCATACAGAACAACCCTT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp TGGCTTCTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGGAAGCCAGCAGGAATTaGAGGGTTGTTCTGTATGAA +
Preference number: 4 (lower is better)
Translates to: WLLDACSLDACILTPPSLEASRN*RVVLYE
Trigger: TTCATACAGAACAACCCTTCAATTCCTGCTGGCTTC...CAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAGAAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGAAGCCAGCAGGAATTaGAGGGTTGTTCTGTATGAA +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLEASRN*RVVLYE
Trigger: TTCATACAGAACAACCCTTCAATTCCTGCTGGCTTC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGAACGGTGTTGCTCGCTaGTGCACCTCCGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLNGVAR*CTSAGL
Trigger: CAAACCTGCGGAGGTGCATCAGCGAGCAACACCGTT...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGAGAAGGGCGGAAGACTaGTCTGAGGGGGAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMRRAED*SEGEPR
Trigger: CCTCGGCTCCCCCTCAGATCAGTCTTCCGCCCTTCT...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCCCTCCACTGAGCCTTTaGGGAGCTTCAGGGGCGGTG +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHIPPLSL*GASGAV
Trigger: CACCGCCCCTGAAGCTCCTCAAAGGCTCAGTGGAGG...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGGTTCCAGGAAGGCAGTaGGGGGCTTGCAGTCACCAA +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLVPGRQ*GACSHQ
Trigger: TTGGTGACTGCAAGCCCCTCACTGCCTTCCTGGAAC...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGCCGAGGATACAGATaGGATGATCTGGGCAATGGA +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEGRGYR*DDLGNG
Trigger: TCCATTGCCCAGATCATCTCATCTGTATCCTCGGCC...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTGCAGAAACGGACTaGACTTGTTGGTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSSAETD*TCWCLW
Trigger: CCACAGACACCAACAAGTTCAGTCCGTTTCTGCAGA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCACCGGCCACCTCATCCTaGGTGTTGTCCTCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSPATSS*VLSSAV
Trigger: GACAGCGGAGGACAACACTCAGGATGAGGTGGCCGG...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTAGACAGTGGGGACAGGTaGTCTTCTGCAGGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLDSGDR*SSAGSW
Trigger: CCAACTGCCTGCAGAAGATCACCTGTCCCCACTGTC...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGTGTGCTGAGGGGGACTaGGGCTGTCACTCCATCCCC +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMCAEGD*GCHSIP
Trigger: GGGGATGGAGTGACAGCCTCAGTCCCCCTCAGCACA...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACTGAGGAAACCCCATaGAGTATAGACGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSTEETP*SIDALL
Trigger: GAGCAAAGCGTCTATACTTCATGGGGTTTCCTCAGT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACACGCTAATGCTCAAATaGAGAGGTCCTCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDTLMLK*RGPLQT
Trigger: TGTCTGGAGAGGACCTCTTCATTTGAGCATTAGCGT...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACGCTAATGCTCAAATaGAGAGGTCCTCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSTLMLK*RGPLQT
Trigger: TGTCTGGAGAGGACCTCTTCATTTGAGCATTAGCGT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTGGTTTTGGCCTaGAACCATATTGGAAACCTT +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLSLVLA*NHIGNL
Trigger: AAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCACTCTGTCCCGTGAGGTaGGGTCTAGCACTTCGCCCG +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSLCPVR*GLALRP
Trigger: CGGGCGAAGTGCTAGACCTCACCTCACGGGACAGAG...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGCATGGTCAGCTGGTaGTGGGTAGTGCAAATCTTC +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSCMVSW*WVVQIF
Trigger: GAAGATTTGCACTACCCAGCACCAGCTGACCATGCA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACTCCAAGTCACCTGACTaGCCGTCTTCTACCATCTTT +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDSKSPD*PSSTIF
Trigger: AAAGATGGTAGAAGACGGGCAGTCAGGTGACTTGGA...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp CTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACATCCAAGTCACCTGACTaGCCGTCTTCTACCATCTTT +
Preference number: 4 (lower is better)
Translates to: LDHAWEDCSRPLLNSAVTSKSPD*PSSTIF
Trigger: AAAGATGGTAGAAGACGGGCAGTCAGGTGACTTGGA...TGTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGCAGACAAAACGGTGTTaGTCGCTGATGCACCTCCGC +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWQTKRC*SLMHLR
Trigger: GCGGAGGTGCATCAGCGAGCAACACCGTTTTGTCTG...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp CTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATGTCTGGAGCTGAATTaGCTGGTTGTCATCCGGCAG +
Preference number: 4 (lower is better)
Translates to: LTSNVPGHWVTALLSPKSCLELN*LVVIRQ
Trigger: CTGCCGGATGACAACCAGGCAATTCAGCTCCAGACA...TGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTAGGGACAGGTGCTTTATaGTGTCCTTGGTCGCGGGGA +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLGTGAL*CPWSRG
Trigger: TCCCCGCGACCAAGGACAGCATAAAGCACCTGTCCC...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGTCGATGATGCTGTCCTaGTCCAGCTGCGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAESMMLS*SSCVFI
Trigger: GATGAAGACGCAGCTGGAGCAGGACAGCATCATCGA...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGGGTAGTGGCAGATCTTaGAAATGTAGGGCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWGSGRS*KCRAAP
Trigger: GGGAGCGGCCCTACATTTGCAAGATCTGCCACTACC...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGTGCTTCTTGCGCAGGTaGCGCTCGCAGTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLCFLRR*RSQLAL
Trigger: CAAAGCCAACTGCGAGCGGCACCTGCGCAAGAAGCA...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCGACGCAGCAAGGCTGTaGCACTCAGGAGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHIDAARL*HSGGLS
Trigger: GCTCAGCCCTCCTGAGTGGCACAGCCTTGCTGCGTC...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CACCTCACTAATAAAATGTGGCAAGACCTTATTGACTACGAGGGTACAGATCAAGTTACTGCCAGTGCTTaGGGGCCCTGGGTCCGCCAC +
Preference number: 4 (lower is better)
Translates to: HLTNKMWQDLIDYEGTDQVTASA*GPWVRH
Trigger: GTGGCGGACCCAGGGCCCGCAAGCACTGGCAGTAAC...TTGATCTGTACCCTCGTAGTCAATAAGGTCTTGCCACATTTTATTAGTGAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR GCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTGTCCTCCGCTGTCTaGAGAAACGGACTGAACTTG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSLSSAV*RNGLNL
Trigger: CAAGTTCAGTCCGTTTCTGCAGACAGCGGAGGACAA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGCCGTGGTGTTTGGCATaGCTGGCTTTCTGGTGGATC +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWPWCLA*LAFWWI
Trigger: GATCCACCAGAAAGCCAGGCATGCCAAACACCACGG...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCCTCAGACGGCCACCCTaGCGTGACCTTCTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHILRRPP*RDLLLP
Trigger: AGGGAGGAGAAGGTCACGGCAGGGTGGCCGTCTGAG...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTCTCAGACGGCCACCCTaGCGTGACCTTCTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTALRRPP*RDLLLP
Trigger: AGGGAGGAGAAGGTCACGGCAGGGTGGCCGTCTGAG...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCGGTGGGCAGGCCTCTTaGTGCGCGGCTCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFGGQAS*CAAPAG
Trigger: ACCTGCTGGAGCCGCGCAGCAAGAGGCCTGCCCACC...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACATAGACGCTTTGCTCTaGTGGCTTTTGTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDIDALL*WLLSVL
Trigger: CAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTAT...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTTCACAGAACAAACGGTaGTATCACAGATTCACAAGA +
Preference number: 4 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSSQNKR*YHRFTR
Trigger: TCTTGTGAATCTGTGATAGCACCGTTTGTTCTGTGA...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGGCTACCACCCGAGGGTaGCAACCACAACCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMATTRG*QPQPQA
Trigger: TGCCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGC...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTGCTACCACCCGAGGGTaGCAACCACAACCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTAATTRG*QPQPQA
Trigger: TGCCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGC...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATGTTTCCGCCGTGGCCTaGTCCACAGGCGCATCCCCT +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHVSAVA*STGASP
Trigger: AGGGGATGCGCCTGTGGAGCAGGCCACGGCGGAAAC...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGTCCTCTTGTCTGCCTTaGTGGCCACGCTTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLSSCLP*WPRFWG
Trigger: CCCCCAAAAGCGTGGCCAGCAAGGCAGACAAGAGGA...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCTGCCGGGTCAGGTCCTaGAGCGACCAGAACCGCTTG +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHICRVRS*SDQNRL
Trigger: CAAGCGGTTCTGGTCGCTGCAGGACCTGACCCGGCA...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATGTGTGGGAGCGCATGTaGCGGGTCAGGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHVWERM*RVRSCS
Trigger: GCTGCAGGACCTGACCCGGCACATGCGCTCCCACAC...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTAGCTGCTCCTGGACCATaGTTGGGAAGACTGCTCACG +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLAAPGP*LGRLLT
Trigger: CGTGAGCAGTCTTCCCAAGCATGGTCCAGGAGCAGC...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTATTGCCTGCACAGGATaGTCATGGGTAAAAATAACC +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSIACTG*SWVKIT
Trigger: GGTTATTTTTACCCATGAGCATCCTGTGCAGGCAAT...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGAGGGAAGTCTATTaGCTGCACAGGATGCTCATG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSVREVY*LHRMLM
Trigger: CATGAGCATCCTGTGCAGGCAATAGACTTCCCTCAC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGCAGAGCCACCACTCCTaGAACACACAGTCGGAGCAA +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWQSHHS*NTQSEQ
Trigger: TTGCTCCGACTGTGTGTTCCAGGAGTGGTGGCTCTG...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGTCTGCCAATCCGATTTaGTCCTGGAGGCTTCGAGGG +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWSANPI*SWRLRG
Trigger: CCCTCGAAGCCTCCAGGACCAAATCGGATTGGCAGA...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGTGCATGGTCAGCTaGTGCTGGGTAGTGCAAATC +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSMCMVS*CWVVQI
Trigger: GATTTGCACTACCCAGCACCAGCTGACCATGCACAT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGTGTCTGTGTTGTGCTaGCGAATGTGCATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEVSVLC*RMCMVS
Trigger: GCTGACCATGCACATTCGCCAGCACAACACAGACAC...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTAGGGTCCTTCTCATaGATCTTCATATGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSLGSFS*IFICLC
Trigger: GCACAGACATATGAAGATCCATGAGAAGGACCCTAA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp CACAGCTGGGTAAGGCTTGGATTAGGCTTAGCAGGAAGACTGGGAATACCTCGCGACTCAGTTTCCTCTTaGAGGACAATCGCCTACGTT +
Preference number: 4 (lower is better)
Translates to: HSWVRLGLGLAGRLGIPRDSVSS*RTIAYV
Trigger: AACGTAGGCGATTGTCCTCCAAGAGGAAACTGAGTC...GCGAGGTATTCCCAGTCTTCCTGCTAAGCCTAATCCAAGCCTTACCCAGCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTGAAACATACTaGGCAGTGAAAGACTTCATC +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSLLETY*AVKDFI
Trigger: GATGAAGTCTTTCACTGCCCAGTATGTTTCAAGGAG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAATGGGTCTCCATGTaGGTCTCCAGTCCATACTTG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSEWVSM*VSSPYL
Trigger: CAAGTATGGACTGGAGACCCACATGGAGACCCATTC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACTGCCCATTGCATCCCTaGGAAGTTGTTTGTGGACAA +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDCPLHP*EVVCGQ
Trigger: TTGTCCACAAACAACTTCCCAGGGATGCAATGGGCA...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTACCAGTGAGCAGAGCATaGGGAACGCCTTGTCACAGG +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLPVSRA*GTPCHR
Trigger: CCTGTGACAAGGCGTTCCCCATGCTCTGCTCACTGG...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATGCCAGGAAGCCCTTCTaGTCCAGGGCGTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHARKPF*SRASPG
Trigger: GCCTGGTGACGCCCTGGACCAGAAGGGCTTCCTGGC...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCTTCAGAATTTGCTaGATGTCTGCCAGCTCGATG +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLIFRIC*MSASSM
Trigger: CATCGAGCTGGCAGACATCCAGCAAATTCTGAAGAT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCAGAGCACCTTGCGCATaGCGGGCGTCTTCTTGCCGC +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHIRAPCA*RASSCR
Trigger: GCGGCAAGAAGACGCCCGCCATGCGCAAGGTGCTCT...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGGAGGTGGAGGCTGGGTaGGGCCCCTGTGAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMEVEAG*GPCEES
Trigger: GCTTTCTTCACAGGGGCCCCACCCAGCCTCCACCTC...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAACTTGATCGAGACATaGGGAGGTGGAGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWNLIET*GGGGWV
Trigger: CACCCAGCCTCCACCTCCCCATGTCTCGATCAAGTT...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTCCAGGATTCCGCTaGGCCCCAAAGTTACAGGAA +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSFPGFR*APKLQE
Trigger: TTCCTGTAACTTTGGGGCCCAGCGGAATCCTGGAAA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCCTGGGTCCGCCACCTTaGTTTTCAGCAGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHILGPPP*FSAGWG
Trigger: CCCCCACCCTGCTGAAAACCAAGGTGGCGGACCCAG...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCCTCTGGGCTGCTGGCTaGAGCGGGAGGCTCACTAGA +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHILWAAG*SGRLTR
Trigger: TCTAGTGAGCCTCCCGCTCCAGCCAGCAGCCCAGAG...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATTGGCAAACTCCCCGCTaGAGTCCAGGTCCACCCCGC +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHWQTPR*SPGPPR
Trigger: GCGGGGTGGACCTGGACTCCAGCGGGGAGTTTGCCA...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGTGTACGAGTTCCGCTTaGCCCTCAGCAGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAECTSSA*PSAACL
Trigger: AAGACAAGCTGCTGAGGGCCAAGCGGAACTCGTACA...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTTCTTCTGCAGGCAGTTaGTGTACGAGTTCCGCTTGG +
Preference number: 4 (lower is better)
Translates to: MCLVTGSLLCFLQSHLCSSSAGS*CTSSAW
Trigger: CCAAGCGGAACTCGTACACCAACTGCCTGCAGAAGA...ACTGCAGAGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp CCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACTCACTCTCTTTTGACTaGGGGATAAGCCCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: PGPCLGRLLTAPSKFCSDSLSFD*GISPFL
Trigger: AAGAAACGGGCTTATCCCCCAGTCAAAAGAGAGTGA...GTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR CCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGTGTGGTTGCTGGCATTaGGAGCCAGCTCAGCCTCGT +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLCGCWH*EPAQPR
Trigger: ACGAGGCTGAGCTGGCTCCCAATGCCAGCAACCACA...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTACAGCCATGTGGTTGCTaGCATTGGGAGCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLQPCGC*HWEPAQ
Trigger: CTGAGCTGGCTCCCAATGCCAGCAACCACATGGCTG...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCAGTTATTGGCTATaGGTACCCAAGGGTATGTTT +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSSSYWL*VPKGMF
Trigger: AAACATACCCTTGGGTACCCATAGCCAATAACTGGA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGCTGCTCCAGTTATTGGCTATaGGTACCCAAGGGTATGTTT +
Preference number: 4 (lower is better)
Translates to: LDACSLDACILTPPSLSCSSYWL*VPKGMF
Trigger: AAACATACCCTTGGGTACCCATAGCCAATAACTGGA...GCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGTTTTCTTCCAGTTATTaGCTATGGGTACCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLFSSSY*LWVPKG
Trigger: ACCCTTGGGTACCCATAGCCAATAACTGGAAGAAAA...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAGTTAACACGGGGACCTaGGTGCGGCACAGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSVNTGT*VRHRSP
Trigger: GGGAGACCTGTGCCGCACCCAGGTCCCCGTGTTAAC...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAGCATCCCCTGCGACCTaGCGGAGCTCAGTGGCGCCC +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKASPAT*RSSVAP
Trigger: GGGCGCCACTGAGCTCCGCCAGGTCGCAGGGGATGC...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGGGGAGTCTGTCTTTaGTTTCTTGTCATCGTCGCT +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSGGVCL*FLVIVA
Trigger: AGCGACGATGACAAGAAACCAAAGACAGACTCCCCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCGCTGGCCGAGCTCAGTaGCTTTCCGCAGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHIAGRAQ*LSADAA
Trigger: TGCAGCATCTGCGGAAAGTCACTGAGCTCGGCCAGC...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGGATGTGTTCGAAAGGTaGCACAACAAATGTCACATC +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRDVFER*HNKCHI
Trigger: GATGTGACATTTGTTGTGTCACCTTTCGAACACATC...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGATGTGTTCGAAAGGTaGCACAACAAATGTCACATC +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLDVFER*HNKCHI
Trigger: GATGTGACATTTGTTGTGTCACCTTTCGAACACATC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCCTTGTGCAGAGCCAGTaGGCAGAGCATGGGGAACGC +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHILVQSQ*AEHGER
Trigger: GCGTTCCCCATGCTCTGCTCACTGGCTCTGCACAAG...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGTCGCGGGGAGAACTGTaGGAGAACCGCCTAGGGAAG +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMSRGEL*ENRLGK
Trigger: CTTCCCTAGGCGGTTCTCTCACAGTTCTCCCCGCGA...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAGCCACTCAGGAGGGCTaGGCTGCCCACGAGTGGAGG +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKATQEG*AAHEWR
Trigger: CCTCCACTCGTGGGCAGCTCAGCCCTCCTGAGTGGC...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp CTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCAAGGATACAGATGAGATaGTCTGGGCAATGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: LTSNVPGHWVTALLSPKSRIQMR*SGQWRP
Trigger: TGGCCTCCATTGCCCAGATCATCTCATCTGTATCCT...TGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGGTTCGCTCGCAGGTCTaGCATTTGTATGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWVRSQV*HLYGLS
Trigger: GGAAAGGCCATACAAATGTCAGACCTGCGAGCGAAC...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCACTCAGCCTCGTTCTCTaGGACGGCGTTGTTGCCGCT +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSLSLVL*DGVVAA
Trigger: AGCGGCAACAACGCCGTCTCAGAGAACGAGGCTGAG...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATTGTGCTGAGGGGGACTaGGGCTGTCACTCCATCCCC +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHCAEGD*GCHSIP
Trigger: GGGGATGGAGTGACAGCCTCAGTCCCCCTCAGCACA...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGAAACTTGAACAGTaGCCATGTCTAATGCTGACA +
Preference number: 4 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLLKLEQ*PCLMLT
Trigger: TGTCAGCATTAGACATGGTCACTGTTCAAGTTTCAA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGATGTCTTGAAACTTaGACAGTGACCATGTCTAAT +
Preference number: 4 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSGCLET*TVTMSN
Trigger: ATTAGACATGGTCACTGTTCAAGTTTCAAGACATCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGTATGAAACTTTCCCCTaGTGTAGCTATCATTCACAC +
Preference number: 4 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLYETFP*CSYHSH
Trigger: GTGTGAATGATAGCTACAGCAGGGGAAAGTTTCATA...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGGTGACTTTCCGCAGATaGTGCATGAGTGGTCGGCTC +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLVTFRR*CMSGRL
Trigger: GAGCCGACCACTCATGCAGCATCTGCGGAAAGTCAC...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTATCTTCATATGTCTGTaGATGTTCCCATTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSIFICL*MFPLVV
Trigger: TACCACCAATGGGAACATGCACAGACATATGAAGAT...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGTGTCTGGAGCTGAATTaGCTGGTTGTCATCCGGCAG +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWCLELN*LVVIRQ
Trigger: CTGCCGGATGACAACCAGGCAATTCAGCTCCAGACA...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTACTGGTATGGCGAGATaGCCAGGTGGGAGCGCACGT +
Preference number: 4 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTATGMAR*PGGSAR
Trigger: ACGTGCGCTCCCACCTGGGCATCTCGCCATACCAGT...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGAAGCCGTGGTGTTACTaGCAGTGCTTGCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMKPWCY*QCLRAL
Trigger: CAGGGCCCGCAAGCACTGGCAGTAACACCACGGCTT...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAACCCTCTTCTTCGACGTaGCCGCTGGGCCCTGCTCGG +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKPSSST*PLGPAR
Trigger: CCGAGCAGGGCCCAGCGGGCACGTCGAAGAAGAGGG...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTATGTCTTCTGGGGGACTaGCCTGCTCTTCATCACTGG +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLCLLGD*PALHHW
Trigger: CCAGTGATGAAGAGCAGGGCAGTCCCCCAGAAGACA...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGTGGCGAACCAGGCTGTaGTTCAAGGTGAAGGTTCGC +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLWRTRL*FKVKVR
Trigger: GCGAACCTTCACCTTGAAGCACAGCCTGGTTCGCCA...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGCCGTGGTGTTTGGCATaGCTGGCTTTCTGGTGGATC +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLPWCLA*LAFWWI
Trigger: GATCCACCAGAAAGCCAGGCATGCCAAACACCACGG...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCATCTCCTCCCTGTGGCTaGAGTCCTTGGTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSSPPCG*SPWWHW
Trigger: CCAGTGCCACCAAGGACTGCAGCCACAGGGAGGAGA...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATCTCAGACGGCCACCCTaGCGTGACCTTCTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHLRRPP*RDLLLP
Trigger: AGGGAGGAGAAGGTCACGGCAGGGTGGCCGTCTGAG...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATAGACGCTTTGCTCTaGTGGCTTTTGTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSIDALL*WLLSVL
Trigger: CAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTAT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAACCGTGCTCTTCCCGGTaGACCGGCGAGGCCGTTTCC +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKPCSSR*TGEAVS
Trigger: GGAAACGGCCTCGCCGGTGCACCGGGAAGAGCACGG...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CACCTCACTAATAAAATGTGGCAAGACCTTATTGACTACGAGGGTACAGATCAACGTCGGCGTCCCCAGTaGTCTCCTCAGTGCCATGCT +
Preference number: 4 (lower is better)
Translates to: HLTNKMWQDLIDYEGTDQRRRPQ*SPQCHA
Trigger: AGCATGGCACTGAGGAGAGCACTGGGGACGCCGACG...TTGATCTGTACCCTCGTAGTCAATAAGGTCTTGCCACATTTTATTAGTGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR GCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGCTTCTTCCTCTTGTCTaGCTTGCTGGCCACGCTTTT +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAELLPLV*LAGHAF
Trigger: AAAAGCGTGGCCAGCAAGGCAGACAAGAGGAAGAAG...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATTGCCGGGTCAGGTCCTaGAGCGACCAGAACCGCTTG +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHCRVRS*SDQNRL
Trigger: CAAGCGGTTCTGGTCGCTGCAGGACCTGACCCGGCA...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCGTGTGGGAGCGCATGTaGCGGGTCAGGTCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFVWERM*RVRSCS
Trigger: GCTGCAGGACCTGACCCGGCACATGCGCTCCCACAC...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGGTCAGCTGGTGCTaGGTAGTGCAAATCTTCTCA +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSMVSWC*VVQIFS
Trigger: TGAGAAGATTTGCACTACCCAGCACCAGCTGACCAT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACTACCATCTTTTTAGCTaGTGCTGGGTCTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDYHLFS*CWVFSL
Trigger: GAGAGAGAAGACCCAGCACCAGCTAAAAAGATGGTA...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACGTGAATCCTAAGTCGTaGAAGCCAGCAGGAATTGAA +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDVNPKS*KPAGIE
Trigger: TTCAATTCCTGCTGGCTTCCACGACTTAGGATTCAC...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGTGTCTGCCAGCTCGATaGCCGACTCGCCAGAGATGG +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMCLPAR*PTRQRW
Trigger: CCATCTCTGGCGAGTCGGCCATCGAGCTGGCAGACA...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAACCCGGGGAAGCCTGCTaGGCGTTGATGAGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKPGEAC*ALMRGG
Trigger: CCCGCCTCTCATCAACGCCCAGCAGGCTTCCCCGGG...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAGCAGCAGGTGGGCGTTaGAGGCCGCCTCCACTGAGC +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKAAGGR*RPPPLS
Trigger: GCTCAGTGGAGGCGGCCTCCAACGCCCACCTGCTGC...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTAGATGTTGCACTGGTATaGCGAGATGCCCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLDVALV*RDAQVG
Trigger: TCCCACCTGGGCATCTCGCCATACCAGTGCAACATC...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGTGCTTGAGGATGTGGTaGATGCAGTTGCGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLCLRMW*MQLRLA
Trigger: GGCCAAGCGCAACTGCATCCACCACATCCTCAAGCA...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTAAACTTGATCGAGACATaGGGAGGTGGAGGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLNLIET*GGGGWV
Trigger: CACCCAGCCTCCACCTCCCCATGTCTCGATCAAGTT...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTATGGCTTCGCTGGGAGTaGCCAAATCCTTGTCCCCTT +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLWLRWE*PNPCPL
Trigger: AAGGGGACAAGGATTTGGCCACTCCCAGCGAAGCCA...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGCCTCCTCAGGCTTCTTaGCTTCGCTGGGAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMPPQAS*LRWEWP
Trigger: TGGCCACTCCCAGCGAAGCCAAGAAGCCTGAGGAGG...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCCCTCCTCAGGCTTCTTaGCTTCGCTGGGAGTGGCCA +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHIPPQAS*LRWEWP
Trigger: TGGCCACTCCCAGCGAAGCCAAGAAGCCTGAGGAGG...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCCGGTGGTGGCGGCTTTaGGGACAGAACCTCCTAAGC +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHIRWWRL*GQNLLS
Trigger: GCTTAGGAGGTTCTGTCCCCAAAGCCGCCACCACCG...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCGCATGCCTGGCTTTCTaGTGGATCCGCTGGTGGCGA +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHIACLAF*WIRWWR
Trigger: TCGCCACCAGCGGATCCACCAGAAAGCCAGGCATGC...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGCCTTCCCGTGGTGTTTaGCATGCCTGGCTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLPSRGV*HAWLSG
Trigger: ACCAGAAAGCCAGGCATGCCAAACACCACGGGAAGG...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCACGGGTGACAGCCATGTaGTTGCTGGCATTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSRVTAM*LLALGA
Trigger: GGCTCCCAATGCCAGCAACCACATGGCTGTCACCCG...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGCGGGTGACAGCCATGTaGTTGCTGGCATTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMRVTAM*LLALGA
Trigger: GGCTCCCAATGCCAGCAACCACATGGCTGTCACCCG...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATAGTCCTTGGTGGCACTaGCCAAGCCCTCCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHSPWWH*PSPPSG
Trigger: GCCGGAAGGAGGGCTTGGCCAGTGCCACCAAGGACT...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATTCCATCCCCACGAGCTaGGAGGCGCCATCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHSIPTS*EAPSAV
Trigger: CACAGCTGATGGCGCCTCCCAGCTCGTGGGGATGGA...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CACCTCACTAATAAAATGTGGCAAGACCTTATTGACTACGAGGGTACAGATCAATCCATCCCCACGAGCTaGGAGGCGCCATCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: HLTNKMWQDLIDYEGTDQSIPTS*EAPSAV
Trigger: CACAGCTGATGGCGCCTCCCAGCTCGTGGGGATGGA...TTGATCTGTACCCTCGTAGTCAATAAGGTCTTGCCACATTTTATTAGTGAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR CCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGACACCCATGATAATATaGAGGGATCCGGTAAGTAGT +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRTPMII*RDPVSS
Trigger: ACTACTTACCGGATCCCTCCATATTATCATGGGTGT...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TGGCTTCTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGACACCCATGATAATATaGAGGGATCCGGTAAGTAGT +
Preference number: 4 (lower is better)
Translates to: WLLDACSLDACILTPPSLTPMII*RDPVSS
Trigger: ACTACTTACCGGATCCCTCCATATTATCATGGGTGT...CAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAGAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACCCATGATAATATaGAGGGATCCGGTAAGTAGT +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLTPMII*RDPVSS
Trigger: ACTACTTACCGGATCCCTCCATATTATCATGGGTGT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTTTTTCTTCCAGTTATTaGCTATGGGTACCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: CFAFSKVISAVLQARPWLFSSSY*LWVPKG
Trigger: ACCCTTGGGTACCCATAGCCAATAACTGGAAGAAAA...AAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGCA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTCTTCCAGTTATTaGCTATGGGTACCCAAGGGT +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLFSSSY*LWVPKG
Trigger: ACCCTTGGGTACCCATAGCCAATAACTGGAAGAAAA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCAGGTCTGACATTTGTATaGCCTTTCCCCTGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: LTSNVPGHWVTALLSPKSGLTFV*PFPCVG
Trigger: TCCCACACAGGGGAAAGGCCATACAAATGTCAGACC...TGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGCTCCAGGCACGGCCCTaGCTTCTTGATGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMLQARP*LLDACS
Trigger: GGAACAGGCATCAAGAAGCCAGGGCCGTGCCTGGAG...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGTCTTCCTGTGAAGTCTaGGAGGTTGGATTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: CLITVEELPPEGANHNRRSSCEV*EVGFQK
Trigger: TTTCTGAAATCCAACCTCCCAGACTTCACAGGAAGA...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AAGACTGGGAATACCTCGCTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTGGAACACAGCCCTCTaGGTTGTTTTGTTTTCACAG +
Preference number: 4 (lower is better)
Translates to: KTGNTSLTSNVPGHWVTAWNTAL*VVLFSQ
Trigger: CTGTGAAAACAAAACAACCCAGAGGGCTGTGTTCCA...AGCAGTGACCCAGTGACCAGGCACATTACTCGTGAGCGAGGTATTCCCAGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR TCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAAATGAGTCTGTGTTaGCCTCTTGTCTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLKMSLC*PLVFFS
Trigger: AGAGAAGAAGACAAGAGGTCAACACAGACTCATTTT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATTCCGCAGATGCTGCATaGGTGGTCGGCTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHSADAA*VVGSSS
Trigger: ACTGGAGGAGCCGACCACTCATGCAGCATCTGCGGA...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTATCTGACTCGGCATCGTaGCTCAGTTTCCTCTTGGAG +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLSDSAS*LSFLLE
Trigger: CTCCAAGAGGAAACTGAGTCACGATGCCGAGTCAGA...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACTGCAAACAAACTCCTTaGAACATACTGGGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDCKQTP*NILGSE
Trigger: TTCACTGCCCAGTATGTTTCAAGGAGTTTGTTTGCA...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp CACAGCTGGGTAAGGCTTGGATTAGGCTTAGCAGGAAGACTGGGAATACCTCGCTGCAAACAAACTCCTTaGAACATACTGGGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: HSWVRLGLGLAGRLGIPRCKQTP*NILGSE
Trigger: TTCACTGCCCAGTATGTTTCAAGGAGTTTGTTTGCA...GCGAGGTATTCCCAGTCTTCCTGCTAAGCCTAATCCAAGCCTTACCCAGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCATGGACAAGCGCGTTGTaGCGCAGCAGTCCTCGATGT +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSWTSAL*RSSPRC
Trigger: ACATCGAGGACTGCTGCGTCACAACGCGCTTGTCCA...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAGGGTTGTTCTGTATaGAAGGTCTGCCCATTGCAT +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSKGCSV*KVCPLH
Trigger: ATGCAATGGGCAGACCTTTCATACAGAACAACCCTT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTAACGGTGTTGCTCGCTaGTGCACCTCCGCAGGTTTG +
Preference number: 4 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTANGVAR*CTSAGL
Trigger: CAAACCTGCGGAGGTGCATCAGCGAGCAACACCGTT...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCAGAAGGGCGGAAGACTaGTCTGAGGGGGAGCCGAGG +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFRRAED*SEGEPR
Trigger: CCTCGGCTCCCCCTCAGATCAGTCTTCCGCCCTTCT...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCGGAGGCCGCCTCCACTaGGCCTTTGAGGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFGGRLH*AFEELQ
Trigger: CTGAAGCTCCTCAAAGGCTCAGTGGAGGCGGCCTCC...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAGGGCACGATAGTGCTTaGGGTCCTCGCCGCACAGCC +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKGHDSA*GPRRTA
Trigger: GGCTGTGCGGCGAGGACCTCAAGCACTATCGTGCCC...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATTGGCGGGCTCCAACTTaGTCGAGACATGGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHWRAPT*SRHGEV
Trigger: CACCTCCCCATGTCTCGATCAAGTTGGAGCCCGCCA...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGGACAGTGGGGACAGGTaGTCTTCTGCAGGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMDSGDR*SSAGSW
Trigger: CCAACTGCCTGCAGAAGATCACCTGTCCCCACTGTC...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTGGCTGTGCTTCAAGGTaGAGGTTCGCTCGCAGGTCT +
Preference number: 4 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTAGCASR*RFARRS
Trigger: AGACCTGCGAGCGAACCTTCACCTTGAAGCACAGCC...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGATGTCTTGAAACTTaGACAGTGACCATGTCTAAT +
Preference number: 4 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLGCLET*TVTMSN
Trigger: ATTAGACATGGTCACTGTTCAAGTTTCAAGACATCC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAATATTGCCCATTTaGTTCTGCTCACTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSQILPI*FCSLQR
Trigger: TCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTATCGTCGCTCTTCTCTaGGGACCTTTTCTCGGCCGC +
Preference number: 4 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTAIVALL*GPFLGR
Trigger: GCGGCCGAGAAAAGGTCCTCAGAGAAGAGCGACGAT...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCATGCAGGCGGAGACAGTaGGGGAAGTCTATTGCCTGC +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSCRRRQ*GKSIAC
Trigger: GCAGGCAATAGACTTCCCTCACTGTCTCCGCCTGCA...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp CTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACACCAAAACCAAACTTGTaGTTCTCTGTTCATGTGGCA +
Preference number: 4 (lower is better)
Translates to: LDHAWEDCSRPLLNSAVTPKPNL*FSVHVA
Trigger: TGCCACATGAACAGAGAATCACAAGTTTGGTTTTGG...TGTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCTTCATATGTCTGTaGATGTTCCCATTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLIFICL*MFPLVV
Trigger: TACCACCAATGGGAACATGCACAGACATATGAAGAT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCACGTCTTTGGTGTGCTaGAGGCCAAGCAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHITSLVC*RPSKAR
Trigger: CCTGGCCTTGCTTGGCCTGCAGCACACCAAAGACGT...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCGGGACAGGTGCTTTATaGTGTCCTTGGTCGCGGGGA +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHIGTGAL*CPWSRG
Trigger: TCCCCGCGACCAAGGACAGCATAAAGCACCTGTCCC...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGGCCATCTTCAGAATTTaGTGGATGTCTGCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWAIFRI*WMSASS
Trigger: CGAGCTGGCAGACATCCAGCAAATTCTGAAGATGGC...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAATGCTTGAAGATCGCCTaGAGTGGGGCGGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKCLKIA*SGAAGA
Trigger: GGCCCCTGCCGCCCCACTGCAGGCGATCTTCAAGCA...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTCTGTCCTGCTCCAGCTaGGTCTTCATCTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTALSCSS*VFISGW
Trigger: CCAGCCTGAGATGAAGACGCAGCTGGAGCAGGACAG...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTTGCTTCTTGCGCAGGTaGCGCTCGCAGTTGGCTTTG +
Preference number: 4 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTACFLRR*RSQLAL
Trigger: CAAAGCCAACTGCGAGCGGCACCTGCGCAAGAAGCA...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCTGTGGTGGATGCAGTTaGGCTTGGCCGCGAACGCGG +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFCGGCS*AWPRTR
Trigger: CCGCGTTCGCGGCCAAGCGCAACTGCATCCACCACA...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGTTGTCCTCCGCTGTCTaGAGAAACGGACTGAACTTG +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWLSSAV*RNGLNL
Trigger: CAAGTTCAGTCCGTTTCTGCAGACAGCGGAGGACAA...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCACTGAGACGGCGTTGTTaGCGCTGTGGGTGGACTCAT +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSLRRRC*RCGWTH
Trigger: ATGAGTCCACCCACAGCGGCAACAACGCCGTCTCAG...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCATCCTCTTGTCTGCCTTaGTGGCCACGCTTTTGGGGG +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSSSCLP*WPRFWG
Trigger: CCCCCAAAAGCGTGGCCAGCAAGGCAGACAAGAGGA...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGGCTTGTTGCACACGCTaGAGACCTTCTTCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWACCTR*RPSSSC
Trigger: ACAAGAGGAAGAAGGTCTGCAGCGTGTGCAACAAGC...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACTGGGTCACTGCTTTaGTTTCTCCAAAGTCATCTC +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSTGSLL*FLQSHL
Trigger: GAGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGGTAGTAGTATTTCCTTaGTTTGCAAATGACAGTAGC +
Preference number: 4 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLVVVFP*FANDSS
Trigger: GCTACTGTCATTTGCAAAGCAAGGAAATACTACTAC...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGGGAGAAAAGGGGGCGTaGACGTTTCTGTGTGAACAA +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWGEKGA*TFLCEQ
Trigger: TTGTTCACACAGAAACGTGCACGCCCCCTTTTCTCC...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATAGCTGCCCTCCTTATTaGGGGGCTGAACCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHSCPPY*GAEPGW
Trigger: CCAGCCAGGTTCAGCCCCCCAATAAGGAGGGCAGCT...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTAGTGTCTGTGTTGTGCTaGCGAATGTGCATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLVSVLC*RMCMVS
Trigger: GCTGACCATGCACATTCGCCAGCACAACACAGACAC...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AAGACTGGGAATACCTCGCTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTAGGGTCCTTCTCATaGATCTTCATATGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: KTGNTSLTSNVPGHWVTALGSFS*IFICLC
Trigger: GCACAGACATATGAAGATCCATGAGAAGGACCCTAA...AGCAGTGACCCAGTGACCAGGCACATTACTCGTGAGCGAGGTATTCCCAGTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTACCATCTTTTTAGCTaGTGCTGGGTCTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSYHLFS*CWVFSL
Trigger: GAGAGAGAAGACCCAGCACCAGCTAAAAAGATGGTA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGAATCCTAAGTCGTaGAAGCCAGCAGGAATTGAA +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSVNPKS*KPAGIE
Trigger: TTCAATTCCTGCTGGCTTCCACGACTTAGGATTCAC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCACAGGCTCAGCAGGTTaGTGCAGCCGGGGTCCTGAG +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFTGSAG*CSRGPE
Trigger: CTCAGGACCCCGGCTGCACCAACCTGCTGAGCCTGT...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTAATGCTGCTGTCAGGCTaGATGATGAAGCCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLMLLSG*MMKPFW
Trigger: CCAGAAGGGCTTCATCATCCAGCCTGACAGCAGCAT...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCTTCAGAATTTGCTaGATGTCTGCCAGCTCGATG +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSIFRIC*MSASSM
Trigger: CATCGAGCTGGCAGACATCCAGCAAATTCTGAAGAT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCGAGGTGGAGGCTGGGTaGGGCCCCTGTGAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFEVEAG*GPCEES
Trigger: GCTTTCTTCACAGGGGCCCCACCCAGCCTCCACCTC...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTAGCTTCTTGGCTTCGCTaGGAGTGGCCAAATCCTTGT +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLASWLR*EWPNPC
Trigger: ACAAGGATTTGGCCACTCCCAGCGAAGCCAAGAAGC...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGTTTCCAGGATTCCGCTaGGCCCCAAAGTTACAGGAA +
Preference number: 4 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWFPGFR*APKLQE
Trigger: TTCCTGTAACTTTGGGGCCCAGCGGAATCCTGGAAA...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAACCGGAGCAGGGGCCATaGGGCTTTCCAGGATTCCGC +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKPEQGP*GFPGFR
Trigger: GCGGAATCCTGGAAAGCCCCATGGCCCCTGCTCCGG...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCTGGGTCCGCCACCTTaGTTTTCAGCAGGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFLGPPP*FSAGWG
Trigger: CCCCCACCCTGCTGAAAACCAAGGTGGCGGACCCAG...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAACTCTTTTGGGCTGGTaGTGGCAGCGGGGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKTLLGW*WQRGWR
Trigger: CCGCCACCCCCGCTGCCACCACCAGCCCAAAAGAGT...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCACTCACTAGACTCTTTTaGGCTGGTGGTGGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSLTRLF*AGGGSG
Trigger: CCCGCTGCCACCACCAGCCCAAAAGAGTCTAGTGAG...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGTCGCTGTCCTTCCCGTaGTGTTTGGCATGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMSLSFP*CLACLA
Trigger: AGCCAGGCATGCCAAACACCACGGGAAGGACAGCGA...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTGCGTTGTTGCCGCTGTaGGTGGACTCATTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTAALLPL*VDSFSL
Trigger: CAGCGAGAATGAGTCCACCCACAGCGGCAACAACGC...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCACAGCCATGTGGTTGCTaGCATTGGGAGCCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSQPCGC*HWEPAQ
Trigger: CTGAGCTGGCTCCCAATGCCAGCAACCACATGGCTG...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAGTGGCCAGGATTGGGTaGGCAGGCCTCTTGCTGCGC +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKVARIG*AGLLLR
Trigger: GCGCAGCAAGAGGCCTGCCCACCCAATCCTGGCCAC...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CACAGCTGGGTAAGGCTTGGATTAGGCTTAGCAGGAAGACTGGGAATACCTCGCACACCCATGATAATATaGAGGGATCCGGTAAGTAGT +
Preference number: 4 (lower is better)
Translates to: HSWVRLGLGLAGRLGIPRTPMII*RDPVSS
Trigger: ACTACTTACCGGATCCCTCCATATTATCATGGGTGT...GCGAGGTATTCCCAGTCTTCCTGCTAAGCCTAATCCAAGCCTTACCCAGCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATTCCAGGTCCAGGCTCTaGTTGCTCGACGCGTCCTCT +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHSRSRL*LLDASS
Trigger: AGAGGACGCGTCGAGCAACCAGAGCCTGGACCTGGA...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGGAGGTAGCTGACACTTaGGTGTCTGGAGCTGAATTG +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLEVADT*VSGAEL
Trigger: CAATTCAGCTCCAGACACTCAAGTGTCAGCTACCTC...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAGGAGGCCGCCTCCACTaGGCCTTTGAGGAGCTTCAG +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKGGRLH*AFEELQ
Trigger: CTGAAGCTCCTCAAAGGCTCAGTGGAGGCGGCCTCC...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAACCGGCCACCTCATCCTaGGTGTTGTCCTCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKPATSS*VLSSAV
Trigger: GACAGCGGAGGACAACACTCAGGATGAGGTGGCCGG...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATGACAGTGGGGACAGGTaGTCTTCTGCAGGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHDSGDR*SSAGSW
Trigger: CCAACTGCCTGCAGAAGATCACCTGTCCCCACTGTC...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTGAAACTTGAACAGTaGCCATGTCTAATGCTGACA +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSLKLEQ*PCLMLT
Trigger: TGTCAGCATTAGACATGGTCACTGTTCAAGTTTCAA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAATATTGCCCATTTaGTTCTGCTCACTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSQILPI*FCSLQR
Trigger: TCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATATCGTCGCTCTTCTCTaGGGACCTTTTCTCGGCCGC +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHIVALL*GPFLGR
Trigger: GCGGCCGAGAAAAGGTCCTCAGAGAAGAGCGACGAT...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACTATGAAACTTTCCCCTaGTGTAGCTATCATTCACAC +
Preference number: 4 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDYETFP*CSYHSH
Trigger: GTGTGAATGATAGCTACAGCAGGGGAAAGTTTCATA...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCGCCGCCACATGGGTCTaGTTGTGCAGAGCCAGTGAG +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFAATWV*LCRASE
Trigger: CTCACTGGCTCTGCACAAGCAGACCCATGTGGCGGC...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGTTCTTGACCCTGGTCTaGCGCCACATGGGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMFLTLV*RHMGLL
Trigger: AAGCAGACCCATGTGGCGGCAGACCAGGGTCAAGAA...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATACGTCTTTGGTGTGCTaGAGGCCAAGCAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHTSLVC*RPSKAR
Trigger: CCTGGCCTTGCTTGGCCTGCAGCACACCAAAGACGT...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAGGCTGCAGGGACAGGTaGTTTATGCTGTCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSGCRDR*FMLSLV
Trigger: GACCAAGGACAGCATAAAGCACCTGTCCCTGCAGCC...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTGGCTGCAGGGACAGGTaGTTTATGCTGTCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTAGCRDR*FMLSLV
Trigger: GACCAAGGACAGCATAAAGCACCTGTCCCTGCAGCC...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCAGGGGTAGAGCACCTTaGGCATGGCGGGCGTCTTCT +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFRGRAP*AWRASS
Trigger: AGAAGACGCCCGCCATGCGCAAGGTGCTCTACCCCT...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGTGTAGTCGCAGATGTTaGACTGGTATGGCGAGATGC +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLCSRRC*TGMARC
Trigger: GCATCTCGCCATACCAGTGCAACATCTGCGACTACA...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCGGTAGTGGCAGATCTTaGAAATGTAGGGCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHIGSGRS*KCRAAP
Trigger: GGGAGCGGCCCTACATTTGCAAGATCTGCCACTACC...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAAGGGCCAGGCCCTTCTaGGAGAAGTCCAGGGGCTCA +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKRARPF*EKSRGS
Trigger: TGAGCCCCTGGACTTCTCGCAGAAGGGCCTGGCCCT...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATGTGTGTGTGAGCATGTaGCTCTGTAGGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHVCVSM*LCRELA
Trigger: GGCCAGCTCCCTACAGAGGCACATGCTCACACACAC...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CACCTCACTAATAAAATGTGGCAAGACCTTATTGACTACGAGGGTACAGATCAAGTGTGTGTGAGCATGTaGCTCTGTAGGGAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: HLTNKMWQDLIDYEGTDQVCVSM*LCRELA
Trigger: GGCCAGCTCCCTACAGAGGCACATGCTCACACACAC...TTGATCTGTACCCTCGTAGTCAATAAGGTCTTGCCACATTTTATTAGTGAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR GCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAGGTCCAGGCTCTGGTTaGTCGACGCGTCCTCTTCCG +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKGPGSG*STRPLP
Trigger: CGGAAGAGGACGCGTCGAGCAACCAGAGCCTGGACC...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CACCTCACTAATAAAATGTGGCAAGACCTTATTGACTACGAGGGTACAGATCAAAGAGGCTCCATACACTaGAGCAAGCACAGGGGTCCC +
Preference number: 4 (lower is better)
Translates to: HLTNKMWQDLIDYEGTDQRGSIH*SKHRGP
Trigger: GGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCT...TTGATCTGTACCCTCGTAGTCAATAAGGTCTTGCCACATTTTATTAGTGAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR CCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCATCTGCCAATCCGATTTaGTCCTGGAGGCTTCGAGGG +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSSANPI*SWRLRG
Trigger: CCCTCGAAGCCTCCAGGACCAAATCGGATTGGCAGA...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTTCTGCCAATCCGATTTaGTCCTGGAGGCTTCGAGGG +
Preference number: 4 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTASANPI*SWRLRG
Trigger: CCCTCGAAGCCTCCAGGACCAAATCGGATTGGCAGA...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTAATGTGCATGGTCAGCTaGTGCTGGGTAGTGCAAATC +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLMCMVS*CWVVQI
Trigger: GATTTGCACTACCCAGCACCAGCTGACCATGCACAT...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCCAGATGCTGCATGAGTaGTCGGCTCCTCCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHIQMLHE*SAPPVS
Trigger: AGACACTGGAGGAGCCGACCACTCATGCAGCATCTG...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTGAAACATACTaGGCAGTGAAAGACTTCATC +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSLLETY*AVKDFI
Trigger: GATGAAGTCTTTCACTGCCCAGTATGTTTCAAGGAG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGAGTGGGTTATCTGAATaGGTCTCCATGTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLSGLSE*VSMWVS
Trigger: GGAGACCCACATGGAGACCCATTCAGATAACCCACT...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCTGCTTGAGGATGTGGTaGATGCAGTTGCGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHICLRMW*MQLRLA
Trigger: GGCCAAGCGCAACTGCATCCACCACATCCTCAAGCA...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCATGGTTTTCAGCAGGGTaGGGGCCGAGGATACAGATG +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSWFSAG*GPRIQM
Trigger: CATCTGTATCCTCGGCCCCCACCCTGCTGAAAACCA...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCAGTGCTTGCGGGCCCTaGGTCCGCCACCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFSACGP*VRHLGF
Trigger: AAAACCAAGGTGGCGGACCCAGGGCCCGCAAGCACT...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGGCATCTTCTCGATGCTaGCAAACTCCCCGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMASSRC*QTPRWS
Trigger: ACTCCAGCGGGGAGTTTGCCAGCATCGAGAAGATGC...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCCTGCTCTTCATCACTaGGCCCATGGTGGTCGGCAG +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFPALHH*AHGGRQ
Trigger: CTGCCGACCACCATGGGCCCAGTGATGAAGAGCAGG...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAAAAACCCGGGGACAGTaGGGACAGGTGATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSKTRGQ*GQVIFC
Trigger: GCAGAAGATCACCTGTCCCCACTGTCCCCGGGTTTT...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAGGCTGCAGTCCTTGGTaGCACTGGCCAAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKGCSPW*HWPSPP
Trigger: AGGAGGGCTTGGCCAGTGCCACCAAGGACTGCAGCC...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAGGGTTAAGGTCACCCTaGCCAGGCTCAGACGGCCAC +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKGLRSP*PGSDGH
Trigger: GTGGCCGTCTGAGCCTGGCCAGGGTGACCTTAACCC...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACACCCATGATAATATaGAGGGATCCGGTAAGTAGT +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSTPMII*RDPVSS
Trigger: ACTACTTACCGGATCCCTCCATATTATCATGGGTGT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAGTTAACACGGGGACCTaGGTGCGGCACAGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKVNTGT*VRHRSP
Trigger: GGGAGACCTGTGCCGCACCCAGGTCCCCGTGTTAAC...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCTCCTGGACCATGCTTaGGAAGACTGCTCACGGCCC +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFLLDHA*EDCSRP
Trigger: GGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGGAG...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATGTAAAGGAGGAGCACTaGGGCCAGAAAAGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHVKEEH*GQKRPG
Trigger: CCCTGGCCTTTTCTGGCCCCAGTGCTCCTCCTTTAC...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGCAGAAACTGGTGAAGTaGCGGAGAAAAGGGGGCGTG +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMQKLVK*RRKGGV
Trigger: CACGCCCCCTTTTCTCCGCCACTTCACCAGTTTCTG...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGCTGTCTGTGCTATCATaGGATCCAACATCACTCTCT +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAELSVLS*DPTSLS
Trigger: AGAGAGTGATGTTGGATCCCATGATAGCACAGACAG...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR TCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAGCTGGCCGAGCTCAGTaGCTTTCCGCAGATGCTGCA +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKAGRAQ*LSADAA
Trigger: TGCAGCATCTGCGGAAAGTCACTGAGCTCGGCCAGC...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp CTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCAAAACATACTGGGCAGTaGAAGACTTCATCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: LTSNVPGHWVTALLSPKSKHTGQ*KTSSAF
Trigger: GAAAGCTGATGAAGTCTTTCACTGCCCAGTATGTTT...TGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATAGCAGCTTCGAAAGGTaGCAGGCTCAGCAGGTTGGT +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHSSFER*QAQQVG
Trigger: ACCAACCTGCTGAGCCTGTCACCTTTCGAAGCTGCT...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCGCCAGAGATGGGCTTaGCCACAATGCTGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFRQRWA*PQCCCQ
Trigger: CTGACAGCAGCATTGTGGTCAAGCCCATCTCTGGCG...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAGTTCGCTCGCAGGTCTaGCATTTGTATGGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSVRSQV*HLYGLS
Trigger: GGAAAGGCCATACAAATGTCAGACCTGCGAGCGAAC...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAGTAAGGCTATGGCACTaGGCGAGCAGCCACGCTCCT +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKVRLWH*ASSHAP
Trigger: AGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTAC...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTGAAACTTGAACAGTaGCCATGTCTAATGCTGACA +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSLKLEQ*PCLMLT
Trigger: TGTCAGCATTAGACATGGTCACTGTTCAAGTTTCAA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp ATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTCAAATATTGCCCATTTaGTTCTGCTCACTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: MCLVTGSLLCFLQSHLCSQILPI*FCSLQR
Trigger: TCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTG...ACTGCAGAGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp CACCTCACTAATAAAATGTGGCAAGACCTTATTGACTACGAGGGTACAGATCAAGTCTCCGCATCCGACTaGCTGTCTGTGCTATCATGG +
Preference number: 4 (lower is better)
Translates to: HLTNKMWQDLIDYEGTDQVSASD*LSVLSW
Trigger: CCATGATAGCACAGACAGTCAGTCGGATGCGGAGAC...TTGATCTGTACCCTCGTAGTCAATAAGGTCTTGCCACATTTTATTAGTGAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR GCA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCTTCATATGTCTGTaGATGTTCCCATTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSIFICL*MFPLVV
Trigger: TACCACCAATGGGAACATGCACAGACATATGAAGAT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAAATTTGCTGGATGTCTaGCAGCTCGATGGCCGACTC +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSNLLDV*QLDGRL
Trigger: GAGTCGGCCATCGAGCTGGCAGACATCCAGCAAATT...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTTTCAGAGGGGGCATGTaGTTGAAGATCGCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTAFRGGM*LKIACS
Trigger: ACTGCAGGCGATCTTCAAGCACATGCCCCCTCTGAA...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCATTCAGAGGGGGCATGTaGTTGAAGATCGCCTGCAGT +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSFRGGM*LKIACS
Trigger: ACTGCAGGCGATCTTCAAGCACATGCCCCCTCTGAA...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCTGTCCTGCTCCAGCTaGGTCTTCATCTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFLSCSS*VFISGW
Trigger: CCAGCCTGAGATGAAGACGCAGCTGGAGCAGGACAG...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCCAGCTCGGCCGCGCTaGTACTCACATACTCGATGT +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFPARPR*YSHTRC
Trigger: ACATCGAGTATGTGAGTAGCAGCGCGGCCGAGCTGG...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATTGTCTTCTGGGGGACTaGCCTGCTCTTCATCACTGG +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHCLLGD*PALHHW
Trigger: CCAGTGATGAAGAGCAGGGCAGTCCCCCAGAAGACA...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATTGGCGAACCAGGCTGTaGTTCAAGGTGAAGGTTCGC +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHWRTRL*FKVKVR
Trigger: GCGAACCTTCACCTTGAAGCACAGCCTGGTTCGCCA...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAATCTCCTCCCTGTGGCTaGAGTCCTTGGTGGCACTGG +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKSPPCG*SPWWHW
Trigger: CCAGTGCCACCAAGGACTGCAGCCACAGGGAGGAGA...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAACTCTCCTCAGTGCCATaGTCCTCCTCCGGCTCATGG +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKLSSVP*SSSGSW
Trigger: CCATGAGCCGGAGGAGGAGCATGGCACTGAGGAGAG...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGTCCTCTTTCGTTTCCTaGTTCCTTCTGCCAATCCGA +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLSSFVS*FLLPIR
Trigger: TCGGATTGGCAGAAGGAACCAGGAAACGAAAGAGGA...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCGTGTCTGTGTTGTGCTaGCGAATGTGCATGGTCAGC +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHIVSVLC*RMCMVS
Trigger: GCTGACCATGCACATTCGCCAGCACAACACAGACAC...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCACGTTTCAGAGGAGATaGAGGGGCTGTGGCTGTGGC +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFTFQRR*RGCGCG
Trigger: GCCACAGCCACAGCCCCTCCATCTCCTCTGAAACGT...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGAGCTGTCTGAAGCCGTaGTGTTACTGCCAGTGCTTG +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMSCLKP*CYCQCL
Trigger: CAAGCACTGGCAGTAACACCACGGCTTCAGACAGCT...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAATGCCTGGCTTTCTGGTaGATCCGCTGGTGGCGAACC +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKCLAFW*IRWWRT
Trigger: GGTTCGCCACCAGCGGATCCACCAGAAAGCCAGGCA...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATCCTTCCCGTGGTGTTTaGCATGCCTGGCTTTCTGGT +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHPSRGV*HAWLSG
Trigger: ACCAGAAAGCCAGGCATGCCAAACACCACGGGAAGG...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATTGTTGCCGCTGTGGGTaGACTCATTCTCGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHCCRCG*THSRCP
Trigger: AGGACAGCGAGAATGAGTCCACCCACAGCGGCAACA...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCATGCTGGCCACGCTTTTaGGGGAGTCTGTCTTTGGTT +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSCWPRF*GSLSLV
Trigger: AACCAAAGACAGACTCCCCCAAAAGCGTGGCCAGCA...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAACTCCAGGCACGGCCCTaGCTTCTTGATGCCTGTTCC +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKLQARP*LLDACS
Trigger: GGAACAGGCATCAAGAAGCCAGGGCCGTGCCTGGAG...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp CTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATCTTCCTGTGAAGTCTaGGAGGTTGGATTTCAGAAA +
Preference number: 4 (lower is better)
Translates to: LTSNVPGHWVTALLSPKSSSCEV*EVGFQK
Trigger: TTTCTGAAATCCAACCTCCCAGACTTCACAGGAAGA...TGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGAAAATGAGTCTGTGTTaGCCTCTTGTCTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEKMSLC*PLVFFS
Trigger: AGAGAAGAAGACAAGAGGTCAACACAGACTCATTTT...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR TCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAAGGATACAGATGAGATaGTCTGGGCAATGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSRIQMR*SGQWRP
Trigger: TGGCCTCCATTGCCCAGATCATCTCATCTGTATCCT...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGTCTGCAGAAACGGACTaGACTTGTTGGTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMSAETD*TCWCLW
Trigger: CCACAGACACCAACAAGTTCAGTCCGTTTCTGCAGA...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTACAGCCAAAGGGCACTaGGGAAACCCCATGAAGTAT +
Preference number: 4 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTATAKGH*GNPMKY
Trigger: ATACTTCATGGGGTTTCCTCAGTGCCCTTTGGCTGT...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp CTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCAGGATGTCTTGAAACTTaGACAGTGACCATGTCTAAT +
Preference number: 4 (lower is better)
Translates to: LTSNVPGHWVTALLSPKSGCLET*TVTMSN
Trigger: ATTAGACATGGTCACTGTTCAAGTTTCAAGACATCC...TGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGGATTTCAGAAACTGGTaGAGTGGCGGAGAAAAGGGG +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMDFRNW*SGGEKG
Trigger: CCCCTTTTCTCCGCCACTTCACCAGTTTCTGAAATC...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTAAGAAGCCTCTaGTATAAAACTCCATTTTCT +
Preference number: 4 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSLLRSL*YKTPFS
Trigger: AGAAAATGGAGTTTTATAGCAGAGGCTTCTTAGAAG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR GCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCATGCATGGTCAGCTGGTaGTGGGTAGTGCAAATCTTC +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSCMVSW*WVVQIF
Trigger: GAAGATTTGCACTACCCAGCACCAGCTGACCATGCA...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGACCAGGCCTGAGAAATaGGAGGAAACTTCCTACAGG +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMTRPEK*EETSYR
Trigger: CCTGTAGGAAGTTTCCTCGCATTTCTCAGGCCTGGT...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGGCCATCTTCAGAATTTaGTGGATGTCTGCCAGCTCG +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMAIFRI*WMSASS
Trigger: CGAGCTGGCAGACATCCAGCAAATTCTGAAGATGGC...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAACCAGCATCTTCTCGATaGTGGCAAACTCCCCGCTGG +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKPASSR*WQTPRW
Trigger: CCAGCGGGGAGTTTGCCAGCATCGAGAAGATGCTGG...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCGCTTGTTGCACACGCTaGAGACCTTCTTCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHIACCTR*RPSSSC
Trigger: ACAAGAGGAAGAAGGTCTGCAGCGTGTGCAACAAGC...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTCATGCTTGGGAAGACTaGTCACGGCCCCTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTAHAWED*SRPLLN
Trigger: ATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATG...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATTGTTCCCTGGATGCATaGATCCTCACTCCACCCTCT +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHCSLDA*ILTPPS
Trigger: AGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACA...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTGGGAAGTCTATTGCCTaGACAGGATGCTCATGGGTA +
Preference number: 4 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTAGKSIA*TGCSWV
Trigger: TACCCATGAGCATCCTGTGCAGGCAATAGACTTCCC...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAAGTGGGTTATCTGAATaGGTCTCCATGTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSSGLSE*VSMWVS
Trigger: GGAGACCCACATGGAGACCCATTCAGATAACCCACT...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGGTGAATCCTAAGTCGTaGAAGCCAGCAGGAATTGAA +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLVNPKS*KPAGIE
Trigger: TTCAATTCCTGCTGGCTTCCACGACTTAGGATTCAC...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCTCGCAGATGTTGCACTaGTATGGCGAGATGCCCAGG +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFSQMLH*YGEMPR
Trigger: CCTGGGCATCTCGCCATACCAGTGCAACATCTGCGA...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGTTTCCAGGATTCCGCTaGGCCCCAAAGTTACAGGAA +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMFPGFR*APKLQE
Trigger: TTCCTGTAACTTTGGGGCCCAGCGGAATCCTGGAAA...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCTGGTTTTCAGCAGGGTaGGGGCCGAGGATACAGATG +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFWFSAG*GPRIQM
Trigger: CATCTGTATCCTCGGCCCCCACCCTGCTGAAAACCA...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCGCATCTTCTCGATGCTaGCAAACTCCCCGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFASSRC*QTPRWS
Trigger: ACTCCAGCGGGGAGTTTGCCAGCATCGAGAAGATGC...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATTGTTGGTGTCTGTGGTaGCCAGCATCTTCTCGATGC +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHCWCLW*PASSRC
Trigger: GCATCGAGAAGATGCTGGCCACCACAGACACCAACA...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCAAAACCCGGGGACAGTaGGGACAGGTGATCTTCTGC +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFKTRGQ*GQVIFC
Trigger: GCAGAAGATCACCTGTCCCCACTGTCCCCGGGTTTT...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCGGTGTTTGGCATGCCTaGCTTTCTGGTGGATCCGCT +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFGVWHA*LSGGSA
Trigger: AGCGGATCCACCAGAAAGCCAGGCATGCCAAACACC...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAATCGCTGTCCTTCCCGTaGTGTTTGGCATGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKSLSFP*CLACLA
Trigger: AGCCAGGCATGCCAAACACCACGGGAAGGACAGCGA...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAGCGTTGTTGCCGCTGTaGGTGGACTCATTCTCGCTG +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKALLPL*VDSFSL
Trigger: CAGCGAGAATGAGTCCACCCACAGCGGCAACAACGC...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGGGGGGAGTCTGTCTTTaGTTTCTTGTCATCGTCGCT +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMGGVCL*FLVIVA
Trigger: AGCGACGATGACAAGAAACCAAAGACAGACTCCCCC...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGAAACATACTGGGCAGTaGAAGACTTCATCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLKHTGQ*KTSSAF
Trigger: GAAAGCTGATGAAGTCTTTCACTGCCCAGTATGTTT...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGTGCAAACAAACTCCTTaGAACATACTGGGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLCKQTP*NILGSE
Trigger: TTCACTGCCCAGTATGTTTCAAGGAGTTTGTTTGCA...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTACTGAGGAAACCCCATaGAGTATAGACGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTATEETP*SIDALL
Trigger: GAGCAAAGCGTCTATACTTCATGGGGTTTCCTCAGT...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGACGCTAATGCTCAAATaGAGAGGTCCTCTCCAGACA +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMTLMLK*RGPLQT
Trigger: TGTCTGGAGAGGACCTCTTCATTTGAGCATTAGCGT...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAATTCTTGACCCTGGTCTaGCGCCACATGGGTCTGCTT +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKFLTLV*RHMGLL
Trigger: AAGCAGACCCATGTGGCGGCAGACCAGGGTCAAGAA...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATTTGTCCTCCGCTGTCTaGAGAAACGGACTGAACTTG +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHLSSAV*RNGLNL
Trigger: CAAGTTCAGTCCGTTTCTGCAGACAGCGGAGGACAA...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCACCAGAACCGCTTGTTaGACACGCTGCAGACCTTCT +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFTRTAC*TRCRPS
Trigger: AGAAGGTCTGCAGCGTGTGCAACAAGCGGTTCTGGT...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGATCAATAGTGATTATTaGGAGCGGCAGCCCCAGCTA +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMINSDY*ERQPQL
Trigger: TAGCTGGGGCTGCCGCTCGCAATAATCACTATTGAT...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR CCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTATTAGGGTCCTTCTCATaGATCTTCATATGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLLGSFS*IFICLC
Trigger: GCACAGACATATGAAGATCCATGAGAAGGACCCTAA...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCGACTCAGTTTCCTCTTaGAGGACAATCGCCTACGTT +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHIDSVSS*RTIAYV
Trigger: AACGTAGGCGATTGTCCTCCAAGAGGAAACTGAGTC...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGTGCCCATTGCATCCCTaGGAAGTTGTTTGTGGACAA +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMCPLHP*EVVCGQ
Trigger: TTGTCCACAAACAACTTCCCAGGGATGCAATGGGCA...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGGGTCTGACATTTGTATaGCCTTTCCCCTGTGCTATC +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMGLTFV*PFPCAI
Trigger: GATAGCACAGGGGAAAGGCCATACAAATGTCAGACC...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334984.10
CDS-3UTR CCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAGGTGTTTGGCATGCCTaGCTTTCTGGTGGATCCGCT +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKGVWHA*LSGGSA
Trigger: AGCGGATCCACCAGAAAGCCAGGCATGCCAAACACC...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATGGTCTGACATTTGTATaGCCTTTCCCCTGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHGLTFV*PFPCVG
Trigger: TCCCACACAGGGGAAAGGCCATACAAATGTCAGACC...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTAAAAATGAGTCTGTGTTaGCCTCTTGTCTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLKMSLC*PLVFFS
Trigger: AGAGAAGAAGACAAGAGGTCAACACAGACTCATTTT...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATCCGACATCATGGTGTTaGTGGAAGATAGGTCTGAAC +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHPTSWC*WKIGLN
Trigger: GTTCAGACCTATCTTCCATCAACACCATGATGTCGG...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAGAAGCCAGCAGGAATTaGAGGGTTGTTCTGTATGAA +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSEASRN*RVVLYE
Trigger: TTCATACAGAACAACCCTTCAATTCCTGCTGGCTTC...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATGTGGCAAGACCTTATTaGCTACGAGGGTACAGATCA +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHVARPY*LRGYRS
Trigger: TGATCTGTACCCTCGTAGTCAATAAGGTCTTGCCAC...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR GCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAATCGATGATGCTGTCCTaGTCCAGCTGCGTCTTCATC +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKSMMLS*SSCVFI
Trigger: GATGAAGACGCAGCTGGAGCAGGACAGCATCATCGA...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATATAGACGCTTTGCTCTaGTGGCTTTTGTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHIDALL*WLLSVL
Trigger: CAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTAT...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGTCACAGAACAAACGGTaGTATCACAGATTCACAAGA +
Preference number: 4 (lower is better)
Translates to: PRTNIAHLILLTAENSKLSQNKR*YHRFTR
Trigger: TCTTGTGAATCTGTGATAGCACCGTTTGTTCTGTGA...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCTTCTTCCTCTTGTCTaGCTTGCTGGCCACGCTTTT +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFLLPLV*LAGHAF
Trigger: AAAAGCGTGGCCAGCAAGGCAGACAAGAGGAAGAAG...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAACCAGAACCGCTTGTTaGACACGCTGCAGACCTTCT +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKTRTAC*TRCRPS
Trigger: AGAAGGTCTGCAGCGTGTGCAACAAGCGGTTCTGGT...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR GCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCATAACCCTGCCTTTTTaGATCCAGGGGTGTGGGCTA +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFITLPF*IQGCGL
Trigger: TAGCCCACACCCCTGGATGCAAAAAGGCAGGGTTAT...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp CACCTCACTAATAAAATGTGGCAAGACCTTATTGACTACGAGGGTACAGATCAATCCTCTTTCGTTTCCTaGTTCCTTCTGCCAATCCGA +
Preference number: 4 (lower is better)
Translates to: HLTNKMWQDLIDYEGTDQSSFVS*FLLPIR
Trigger: TCGGATTGGCAGAAGGAACCAGGAAACGAAAGAGGA...TTGATCTGTACCCTCGTAGTCAATAAGGTCTTGCCACATTTTATTAGTGAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR CCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCAGTGGGTTATCTGAATaGGTCTCCATGTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFSGLSE*VSMWVS
Trigger: GGAGACCCACATGGAGACCCATTCAGATAACCCACT...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAATGCTGCTGTCAGGCTaGATGATGAAGCCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKMLLSG*MMKPFW
Trigger: CCAGAAGGGCTTCATCATCCAGCCTGACAGCAGCAT...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCATCTTCAGAATTTGCTaGATGTCTGCCAGCTCGATG +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHIIFRIC*MSASSM
Trigger: CATCGAGCTGGCAGACATCCAGCAAATTCTGAAGAT...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAATGTACGAGTTCCGCTTaGCCCTCAGCAGCTTGTCTT +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKCTSSA*PSAACL
Trigger: AAGACAAGCTGCTGAGGGCCAAGCGGAACTCGTACA...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGTCACTCTCTTTTGACTaGGGGATAAGCCCGTTTCTT +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMSLSFD*GISPFL
Trigger: AAGAAACGGGCTTATCCCCCAGTCAAAAGAGAGTGA...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334984.10
ENST00000379938.7
CDS-3UTR CCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCGGGGGAGTCTGTCTTTaGTTTCTTGTCATCGTCGCT +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFGGVCL*FLVIVA
Trigger: AGCGACGATGACAAGAAACCAAAGACAGACTCCCCC...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCGGTCTGACATTTGTATaGCCTTTCCCCTGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFGLTFV*PFPCVG
Trigger: TCCCACACAGGGGAAAGGCCATACAAATGTCAGACC...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAATCTCTGAGCTGCTCCTaGACCATGCTTGGGAAGACT +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKSLSCS*TMLGKT
Trigger: AGTCTTCCCAAGCATGGTCCAGGAGCAGCTCAGAGA...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATAAGGGTTGTTCTGTATaGAAGGTCTGCCCATTGCAT +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHKGCSV*KVCPLH
Trigger: ATGCAATGGGCAGACCTTTCATACAGAACAACCCTT...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCCAAATATTGCCCATTTaGTTCTGCTCACTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHIQILPI*FCSLQR
Trigger: TCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTG...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTGTGCACGTTTCTGTGTaGACAAGTCTATGTAAAGGA +
Preference number: 4 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTAVHVSV*TSLCKG
Trigger: TCCTTTACATAGACTTGTTCACACAGAAACGTGCAC...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTATATCTATCTTCCTGTaGAGTCTGGGAGGTTGGATT +
Preference number: 4 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTAISIFL*SLGGWI
Trigger: AATCCAACCTCCCAGACTTCACAGGAAGATAGATAT...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAGCTTGTTGCACACGCTaGAGACCTTCTTCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKACCTR*RPSSSC
Trigger: ACAAGAGGAAGAAGGTCTGCAGCGTGTGCAACAAGC...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCATGGTCAGCTGGTGCTaGGTAGTGCAAATCTTCTCA +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFMVSWC*VVQIFS
Trigger: TGAGAAGATTTGCACTACCCAGCACCAGCTGACCAT...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCTTAGGGTCCTTCTCATaGATCTTCATATGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHILGSFS*IFICLC
Trigger: GCACAGACATATGAAGATCCATGAGAAGGACCCTAA...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCACTCCTTGAAACATACTaGGCAGTGAAAGACTTCATC +
Preference number: 4 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSLLETY*AVKDFI
Trigger: GATGAAGTCTTTCACTGCCCAGTATGTTTCAAGGAG...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGCTCCTTGAAACATACTaGGCAGTGAAAGACTTCATC +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMLLETY*AVKDFI
Trigger: GATGAAGTCTTTCACTGCCCAGTATGTTTCAAGGAG...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGAAAATGAGTCTGTGTTaGCCTCTTGTCTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMKMSLC*PLVFFS
Trigger: AGAGAAGAAGACAAGAGGTCAACACAGACTCATTTT...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCACACGGAGTAGAAAATaGGTCTGTGTTGACCTCTTG +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFTRSRK*VCVDLL
Trigger: CAAGAGGTCAACACAGACTCATTTTCTACTCCGTGT...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR TCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATAAACATACTGGGCAGTaGAAGACTTCATCAGCTTTC +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHKHTGQ*KTSSAF
Trigger: GAAAGCTGATGAAGTCTTTCACTGCCCAGTATGTTT...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGTATGAAACTTTCCCCTaGTGTAGCTATCATTCACAC +
Preference number: 4 (lower is better)
Translates to: RTNIAHLILLTAENSKLMYETFP*CSYHSH
Trigger: GTGTGAATGATAGCTACAGCAGGGGAAAGTTTCATA...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTATCTTCATATGTCTGTaGATGTTCCCATTGGTGGTA +
Preference number: 4 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTAIFICL*MFPLVV
Trigger: TACCACCAATGGGAACATGCACAGACATATGAAGAT...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAATAGACGCTTTGCTCTaGTGGCTTTTGTCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKIDALL*WLLSVL
Trigger: CAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTAT...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCTACCATCTTTTTAGCTaGTGCTGGGTCTTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFYHLFS*CWVFSL
Trigger: GAGAGAGAAGACCCAGCACCAGCTAAAAAGATGGTA...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCTGTTTGCGCAACTGGTaGCGTTCACAGTTAGATTTG +
Preference number: 4 (lower is better)
Translates to: YTEREEEAIKYILSVHVFCLRNW*RSQLDL
Trigger: CAAATCTAACTGTGAACGCCACCAGTTGCGCAAACA...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334984.10
ENST00000379938.7
CDS-3UTR CCA 90 bp CACCTCACTAATAAAATGTGGCAAGACCTTATTGACTACGAGGGTACAGATCAATCCAGTTATTGGCTATaGGTACCCAAGGGTATGTTT +
Preference number: 4 (lower is better)
Translates to: HLTNKMWQDLIDYEGTDQSSYWL*VPKGMF
Trigger: AAACATACCCTTGGGTACCCATAGCCAATAACTGGA...TTGATCTGTACCCTCGTAGTCAATAAGGTCTTGCCACATTTTATTAGTGAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR TCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATTTGAAACTTGAACAGTaGCCATGTCTAATGCTGACA +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHLKLEQ*PCLMLT
Trigger: TGTCAGCATTAGACATGGTCACTGTTCAAGTTTCAA...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR TCA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCATGCAAACTAAGCTATaGTTCACCCAGAGTTTAAAC +
Preference number: 4 (lower is better)
Translates to: NLPWFWPETILETFINHIMQTKL*FTQSLN
Trigger: GTTTAAACTCTGGGTGAATCATAGCTTAGTTTGCAT...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR TCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAGATGTGTTCGAAAGGTaGCACAACAAATGTCACATC +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKDVFER*HNKCHI
Trigger: GATGTGACATTTGTTGTGTCACCTTTCGAACACATC...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR GCA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAATATGAAACTTTCCCCTaGTGTAGCTATCATTCACAC +
Preference number: 4 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKYETFP*CSYHSH
Trigger: GTGTGAATGATAGCTACAGCAGGGGAAAGTTTCATA...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CCA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATCTCACTAATAAAATGTaGCAAGACCTTATTGACTAC +
Preference number: 4 (lower is better)
Translates to: TEREEEAIKYILSVHVFHLTNKM*QDLIDY
Trigger: GTAGTCAATAAGGTCTTGCCACATTTTATTAGTGAG...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS TCA 90 bp GACACATCACGTGTTGCTCCTGCGAGTCTCCTGGGGACGTGTTACTaGGCGGCCGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGCTCGGA +
Preference number: 5 (lower is better)
Translates to: DTSRVAPASLLGTCY*AAAAAAAAAAAALG
Trigger: TCCGAGCGCCGCCGCCGCCGCCGCCGCCGCCGCCGCGGCCGCTCAGTAACACGTCCCCAGGAGACTCGCAGGAGCAACACGTGATGTGTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379933.7
CDS GCA 90 bp TGCGTCTTCATCTCAGGCTGGCCCGGCAGCTCCGCCCGCGGCTGCTaGAGGGAGAGCCGCGTGGCCGCGTGGGGCTGGGTCCCGGACTTG +
Preference number: 5 (lower is better)
Translates to: CVFISGWPGSSARGC*RESRVAAWGWVPDL
Trigger: CAAGTCCGGGACCCAGCCCCACGCGGCCACGCGGCTCTCCCTGCAGCAGCCGCGGGCGGAGCTGCCGGGCCAGCCTGAGATGAAGACGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 90 bp GGGAGGCGCCATCAGCTGTGGCCAGGATTGGGTGGGCAGGCCTCTTaGTGCGCGGCTCCAGCAGGTCCTGCCCCAGGGCCGCCGGGCTCT +
Preference number: 5 (lower is better)
Translates to: GRRHQLWPGLGGQAS*CAAPAGPAPGPPGS
Trigger: AGAGCCCGGCGGCCCTGGGGCAGGACCTGCTGGAGCCGCGCAGCAAGAGGCCTGCCCACCCAATCCTGGCCACAGCTGATGGCGCCTCCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 90 bp CGGCGAGGCCGTTTCCGCCGTGGCCTGCTCCACAGGCGCATCCCCTaGGACCTGGCGGAGCTCAGTGGCGCCCTCCGACGGCTGCTCTCT +
Preference number: 5 (lower is better)
Translates to: RRGRFRRGLLHRRIP*DLAELSGALRRLLS
Trigger: AGAGAGCAGCCGTCGGAGGGCGCCACTGAGCTCCGCCAGGTCGCAGGGGATGCGCCTGTGGAGCAGGCCACGGCGGAAACGGCCTCGCCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 90 bp CCGTGCTCTTCCCGGTGCACCGGCGAGGCCGTTTCCGCCGTGGCCTaGTCCACAGGCGCATCCCCTGCGACCTGGCGGAGCTCAGTGGCG +
Preference number: 5 (lower is better)
Translates to: PCSSRCTGEAVSAVA*STGASPATWRSSVA
Trigger: CGCCACTGAGCTCCGCCAGGTCGCAGGGGATGCGCCTGTGGAGCAGGCCACGGCGGAAACGGCCTCGCCGGTGCACCGGGAAGAGCACGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 90 bp GCTGCGCGGCTCCAGCAGGTCCTGCCCCAGGGCCGCCGGGCTCTCTaGGTTAAGGTCACCCTGGCCAGGCTCAGACGGCCACCCTGCCGT +
Preference number: 5 (lower is better)
Translates to: AARLQQVLPQGRRAL*VKVTLARLRRPPCR
Trigger: ACGGCAGGGTGGCCGTCTGAGCCTGGCCAGGGTGACCTTAACCCAGAGAGCCCGGCGGCCCTGGGGCAGGACCTGCTGGAGCCGCGCAGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 90 bp CACGCCCGTGCTCTTCCCGGTGCACCGGCGAGGCCGTTTCCGCCGTaGCCTGCTCCACAGGCGCATCCCCTGCGACCTGGCGGAGCTCAG +
Preference number: 5 (lower is better)
Translates to: HARALPGAPARPFPP*PAPQAHPLRPGGAQ
Trigger: CTGAGCTCCGCCAGGTCGCAGGGGATGCGCCTGTGGAGCAGGCCACGGCGGAAACGGCCTCGCCGGTGCACCGGGAAGAGCACGGGCGTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 90 bp GGTGGATGCAGTTGCGCTTGGCCGCGAACGCGGCGCTGCACTCCTTaGACTCGAAGGGCTTGCGGCCCTTGTGGCCCCCGCCCAGGCCGC +
Preference number: 5 (lower is better)
Translates to: GGCSCAWPRTRRCTP*TRRACGPCGPRPGR
Trigger: GCGGCCTGGGCGGGGGCCACAAGGGCCGCAAGCCCTTCGAGTGCAAGGAGTGCAGCGCCGCGTTCGCGGCCAAGCGCAACTGCATCCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS GCA 90 bp AGGCGCCATCAGCTGTGGCCAGGATTGGGTGGGCAGGCCTCTTGCTaGGCGGCTCCAGCAGGTCCTGCCCCAGGGCCGCCGGGCTCTCTG +
Preference number: 5 (lower is better)
Translates to: RRHQLWPGLGGQASC*AAPAGPAPGPPGSL
Trigger: CAGAGAGCCCGGCGGCCCTGGGGCAGGACCTGCTGGAGCCGCGCAGCAAGAGGCCTGCCCACCCAATCCTGGCCACAGCTGATGGCGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 90 bp TCCTCCTCCGGCTCATGGCTCTCCCCACGCCCGTGCTCTTCCCGGTaGACCGGCGAGGCCGTTTCCGCCGTGGCCTGCTCCACAGGCGCA +
Preference number: 5 (lower is better)
Translates to: SSSGSWLSPRPCSSR*TGEAVSAVACSTGA
Trigger: TGCGCCTGTGGAGCAGGCCACGGCGGAAACGGCCTCGCCGGTGCACCGGGAAGAGCACGGGCGTGGGGAGAGCCATGAGCCGGAGGAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 90 bp GTCGCAGGCGAGCTTCTGCTCCTGCGAGGCCGCGCCCCCGGCGCCTaGCTCGCCGTCGCCCTCCGCCAGCTTGAAGTCCATGAGCTTGGT +
Preference number: 5 (lower is better)
Translates to: VAGELLLLRGRAPGA*LAVALRQLEVHELG
Trigger: ACCAAGCTCATGGACTTCAAGCTGGCGGAGGGCGACGGCGAGGCAGGCGCCGGGGGCGCGGCCTCGCAGGAGCAGAAGCTCGCCTGCGAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS CCA 90 bp GCCGTTTCCGCCGTGGCCTGCTCCACAGGCGCATCCCCTGCGACCTaGCGGAGCTCAGTGGCGCCCTCCGACGGCTGCTCTCTGTCCCGT +
Preference number: 5 (lower is better)
Translates to: AVSAVACSTGASPAT*RSSVAPSDGCSLSR
Trigger: ACGGGACAGAGAGCAGCCGTCGGAGGGCGCCACTGAGCTCCGCCAGGTCGCAGGGGATGCGCCTGTGGAGCAGGCCACGGCGGAAACGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 90 bp GCATCCCCTGCGACCTGGCGGAGCTCAGTGGCGCCCTCCGACGGCTaGTCTCTGTCCCGTGAGGTGAGGTCTAGCACTTCGCCCGCGGCG +
Preference number: 5 (lower is better)
Translates to: ASPATWRSSVAPSDG*SLSREVRSSTSPAA
Trigger: CGCCGCGGGCGAAGTGCTAGACCTCACCTCACGGGACAGAGAGCAGCCGTCGGAGGGCGCCACTGAGCTCCGCCAGGTCGCAGGGGATGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS TCA 90 bp GGCCGCAGTGCGTGCGCATGTGGATGCGCAGGGCACGATAGTGCTTaGGGTCCTCGCCGCACAGCCGGCACACGGTGTCCGGGGCGCAGA +
Preference number: 5 (lower is better)
Translates to: GRSACACGCAGHDSA*GPRRTAGTRCPGRR
Trigger: TCTGCGCCCCGGACACCGTGTGCCGGCTGTGCGGCGAGGACCTCAAGCACTATCGTGCCCTGCGCATCCACATGCGCACGCACTGCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS TCA 90 bp GGAGCTCAGTGGCGCCCTCCGACGGCTGCTCTCTGTCCCGTGAGGTaGGGTCTAGCACTTCGCCCGCGGCGGCTGCAGTCTCCGCATCCG +
Preference number: 5 (lower is better)
Translates to: GAQWRPPTAALCPVR*GLALRPRRLQSPHP
Trigger: CGGATGCGGAGACTGCAGCCGCCGCGGGCGAAGTGCTAGACCTCACCTCACGGGACAGAGAGCAGCCGTCGGAGGGCGCCACTGAGCTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS TCA 90 bp GATGGCCCTGTGACAGGGCCCTGGCCAGGCAGCCGTCCCTCCCCATaGCCCAGGAACCCGCCCAGGCTGCACACAGCAACCCAATGCCCC +
Preference number: 5 (lower is better)
Translates to: DGPVTGPWPGSRPSP*PRNPPRLHTATQCP
Trigger: GGGGCATTGGGTTGCTGTGTGCAGCCTGGGCGGGTTCCTGGGTCATGGGGAGGGACGGCTGCCTGGCCAGGGCCCTGTCACAGGGCCATC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 90 bp TCCGGCAGGGGCTCCTCGGCGGGGGCAGGCCTGACGTCTTTGGTGTaGTGCAGGCCAAGCAAGGCCAGGAAGCCCTTCTGGTCCAGGGCG +
Preference number: 5 (lower is better)
Translates to: SGRGSSAGAGLTSLV*CRPSKARKPFWSRA
Trigger: CGCCCTGGACCAGAAGGGCTTCCTGGCCTTGCTTGGCCTGCAGCACACCAAAGACGTCAGGCCTGCCCCCGCCGAGGAGCCCCTGCCGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CCA 90 bp CGCGTGGCCGCGTGGGGCTGGGTCCCGGACTTGGACTGCAGCAGGTaGGCGTTGGAGGCCGCCTCCACTGAGCCTTTGAGGAGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: RVAAWGWVPDLDCSR*ALEAASTEPLRSFR
Trigger: CCTGAAGCTCCTCAAAGGCTCAGTGGAGGCGGCCTCCAACGCCCACCTGCTGCAGTCCAAGTCCGGGACCCAGCCCCACGCGGCCACGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CCA 90 bp TTTTCCGGCCCCTCTTCTTCGACGTGCCCGCTGGGCCCTGCTCGGTaGGAGAGGCAGCCTCTGGGCTGCTGGCTGGAGCGGGAGGCTCAC +
Preference number: 5 (lower is better)
Translates to: FSGPSSSTCPLGPAR*ERQPLGCWLEREAH
Trigger: GTGAGCCTCCCGCTCCAGCCAGCAGCCCAGAGGCTGCCTCTCCCACCGAGCAGGGCCCAGCGGGCACGTCGAAGAAGAGGGGCCGGAAAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 90 bp AGGTCCTGCCCCAGGGCCGCCGGGCTCTCTGGGTTAAGGTCACCCTaGCCAGGCTCAGACGGCCACCCTGCCGTGACCTTCTCCTCCCTG +
Preference number: 5 (lower is better)
Translates to: RSCPRAAGLSGLRSP*PGSDGHPAVTFSSL
Trigger: CAGGGAGGAGAAGGTCACGGCAGGGTGGCCGTCTGAGCCTGGCCAGGGTGACCTTAACCCAGAGAGCCCGGCGGCCCTGGGGCAGGACCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 90 bp ATCCCCACGAGCTGGGAGGCGCCATCAGCTGTGGCCAGGATTGGGTaGGCAGGCCTCTTGCTGCGCGGCTCCAGCAGGTCCTGCCCCAGG +
Preference number: 5 (lower is better)
Translates to: IPTSWEAPSAVARIG*AGLLLRGSSRSCPR
Trigger: CCTGGGGCAGGACCTGCTGGAGCCGCGCAGCAAGAGGCCTGCCCACCCAATCCTGGCCACAGCTGATGGCGCCTCCCAGCTCGTGGGGAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 90 bp CTCCATCCCCACGAGCTGGGAGGCGCCATCAGCTGTGGCCAGGATTaGGTGGGCAGGCCTCTTGCTGCGCGGCTCCAGCAGGTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: LHPHELGGAISCGQD*VGRPLAARLQQVLP
Trigger: GGGCAGGACCTGCTGGAGCCGCGCAGCAAGAGGCCTGCCCACCCAATCCTGGCCACAGCTGATGGCGCCTCCCAGCTCGTGGGGATGGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 90 bp TCCTCTGCAGTGCTGGCGCCATCTCCCTTCTCGTCCTTGGGCTCCTaGCGGCCGTGCGCCTTCCGGTGGCGGCTCAGGGTGCCCAGGAAC +
Preference number: 5 (lower is better)
Translates to: SSAVLAPSPFSSLGS*RPCAFRWRLRVPRN
Trigger: GTTCCTGGGCACCCTGAGCCGCCACCGGAAGGCGCACGGCCGCCAGGAGCCCAAGGACGAGAAGGGAGATGGCGCCAGCACTGCAGAGGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS TCA 90 bp GGCGGCCGTGCGCCTTCCGGTGGCGGCTCAGGGTGCCCAGGAACTTaGAGCTCTTCCCACAGGTGTCGCAGGCGAGCTTCTGCTCCTGCG +
Preference number: 5 (lower is better)
Translates to: GGRAPSGGGSGCPGT*SSSHRCRRRASAPA
Trigger: CGCAGGAGCAGAAGCTCGCCTGCGACACCTGTGGGAAGAGCTTCAAGTTCCTGGGCACCCTGAGCCGCCACCGGAAGGCGCACGGCCGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 90 bp GGCAGGGGCTCCTCGGCGGGGGCAGGCCTGACGTCTTTGGTGTGCTaGAGGCCAAGCAAGGCCAGGAAGCCCTTCTGGTCCAGGGCGTCA +
Preference number: 5 (lower is better)
Translates to: GRGSSAGAGLTSLVC*RPSKARKPFWSRAS
Trigger: TGACGCCCTGGACCAGAAGGGCTTCCTGGCCTTGCTTGGCCTGCAGCACACCAAAGACGTCAGGCCTGCCCCCGCCGAGGAGCCCCTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 90 bp ATGCTCAGCGGCAGCAGGGCCTCGATGATGCTGTCCTGCTCCAGCTaGGTCTTCATCTCAGGCTGGCCCGGCAGCTCCGCCCGCGGCTGC +
Preference number: 5 (lower is better)
Translates to: MLSGSRASMMLSCSS*VFISGWPGSSARGC
Trigger: GCAGCCGCGGGCGGAGCTGCCGGGCCAGCCTGAGATGAAGACGCAGCTGGAGCAGGACAGCATCATCGAGGCCCTGCTGCCGCTGAGCAT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 90 bp TCCTCTTCCGCGCCGTCGGCGTCCCCAGTGCTCTCCTCAGTGCCATaGTCCTCCTCCGGCTCATGGCTCTCCCCACGCCCGTGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: SSSAPSASPVLSSVP*SSSGSWLSPRPCSS
Trigger: GGAAGAGCACGGGCGTGGGGAGAGCCATGAGCCGGAGGAGGAGCATGGCACTGAGGAGAGCACTGGGGACGCCGACGGCGCGGAAGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS GCA 90 bp CGTCCTCTTCCGCCGTCGGCGTCCCCAGTGCTCTCCTCAGTGCCATaGTCCTCCTCCGGCTCATGGCTCTCCCCACGCCCGTGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: RPLPPSASPVLSSVP*SSSGSWLSPRPCSS
Trigger: GGAAGAGCACGGGCGTGGGGAGAGCCATGAGCCGGAGGAGGAGCATGGCACTGAGGAGAGCACTGGGGACGCCGACGGCGGAAGAGGACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611109.1
CDS-3UTR CAA 90 bp GGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAAAGGGCTTGCGGCCCTaGTGGCCCCCGCCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: GPGAQVQWGTFSSLQAETKGLRP*WPPPRP
Trigger: CGGCCTGGGCGGGGGCCACAAGGGCCGCAAGCCCTT...TGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS GCA 90 bp TCTGGTTGCTCGACGCGTCCTCTTCCGCGCCGTCGGCGTCCCCAGTaGTCTCCTCAGTGCCATGCTCCTCCTCCGGCTCATGGCTCTCCC +
Preference number: 5 (lower is better)
Translates to: SGCSTRPLPRRRRPQ*SPQCHAPPPAHGSP
Trigger: GGGAGAGCCATGAGCCGGAGGAGGAGCATGGCACTGAGGAGAGCACTGGGGACGCCGACGGCGCGGAAGAGGACGCGTCGAGCAACCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS GCA 90 bp GCTCTGGTTGCTCGACGCGTCCTCTTCCGCCGTCGGCGTCCCCAGTaGTCTCCTCAGTGCCATGCTCCTCCTCCGGCTCATGGCTCTCCC +
Preference number: 5 (lower is better)
Translates to: ALVARRVLFRRRRPQ*SPQCHAPPPAHGSP
Trigger: GGGAGAGCCATGAGCCGGAGGAGGAGCATGGCACTGAGGAGAGCACTGGGGACGCCGACGGCGGAAGAGGACGCGTCGAGCAACCAGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611109.1
CDS CCA 90 bp GAGGCTGTCACTCCATCCCCACGAGCTGGGAGGCGCCATCAGCTGTaGCCAGGATTGGGTGGGCAGGCCTCTTGCTGCGCGGCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: EAVTPSPRAGRRHQL*PGLGGQASCCAAPA
Trigger: TGCTGGAGCCGCGCAGCAAGAGGCCTGCCCACCCAATCCTGGCCACAGCTGATGGCGCCTCCCAGCTCGTGGGGATGGAGTGACAGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 90 bp CAAGTCAGCACTTGCCCGAGGTCACAGAGCTGCCAGGCGGCAGGCTaGGACGGAGCCGGCTGGCTTCGTTCCACTCTGCCAGGCTGTGCG +
Preference number: 5 (lower is better)
Translates to: QVSTCPRSQSCQAAG*DGAGWLRSTLPGCA
Trigger: CGCACAGCCTGGCAGAGTGGAACGAAGCCAGCCGGCTCCGTCCCAGCCTGCCGCCTGGCAGCTCTGTGACCTCGGGCAAGTGCTGACTTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 90 bp GAGTTCCGCTTGGCCCTCAGCAGCTTGTCTTCTGGGGGACTGCCCTaGTCTTCATCACTGGGCCCATGGTGGTCGGCAGGGGCTCCGGCC +
Preference number: 5 (lower is better)
Translates to: EFRLALSSLSSGGLP*SSSLGPWWSAGAPA
Trigger: GGCCGGAGCCCCTGCCGACCACCATGGGCCCAGTGATGAAGAGCAGGGCAGTCCCCCAGAAGACAAGCTGCTGAGGGCCAAGCGGAACTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 90 bp AGGCCAGGAAGCCCTTCTGGTCCAGGGCGTCACCAGGCAGGGGCGTaGCCTGCGGCTTTTCTTGACCCTGGTCTGCCGCCACATGGGTCT +
Preference number: 5 (lower is better)
Translates to: RPGSPSGPGRHQAGA*PAAFLDPGLPPHGS
Trigger: AGACCCATGTGGCGGCAGACCAGGGTCAAGAAAAGCCGCAGGCCACGCCCCTGCCTGGTGACGCCCTGGACCAGAAGGGCTTCCTGGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CCA 90 bp CGCGGCCTTGTCGGCGGCGATGTAGTCGCAGATGTTGCACTGGTATaGCGAGATGCCCAGGTGGGAGCGCACGTGGGCACGCAAGACCCC +
Preference number: 5 (lower is better)
Translates to: RGLVGGDVVADVALV*RDAQVGAHVGTQDP
Trigger: GGGGTCTTGCGTGCCCACGTGCGCTCCCACCTGGGCATCTCGCCATACCAGTGCAACATCTGCGACTACATCGCCGCCGACAAGGCCGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS-3UTR CAA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGGAAGCCTGCTGGGCGTaGATGAGAGGCGGGGGCGTG +
Preference number: 5 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVEACWA*MRGGGV
Trigger: CACGCCCCCGCCTCTCATCAACGCCCAGCAGGCTTC...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS TCA 90 bp TGGTCCAGGGCGTCACCAGGCAGGGGCGTGGCCTGCGGCTTTTCTTaGCCCTGGTCTGCCGCCACATGGGTCTGCTTGTGCAGAGCCAGT +
Preference number: 5 (lower is better)
Translates to: WSRASPGRGVACGFS*PWSAATWVCLCRAS
Trigger: ACTGGCTCTGCACAAGCAGACCCATGTGGCGGCAGACCAGGGTCAAGAAAAGCCGCAGGCCACGCCCCTGCCTGGTGACGCCCTGGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 90 bp AGCGCACGTGGGCACGCAAGACCCCCGAGAAGGCAAACACCTGGTTaGAGAAGCGGCAGGGGTAGAGCACCTTGCGCATGGCGGGCGTCT +
Preference number: 5 (lower is better)
Translates to: SARGHARPPRRQTPG*RSGRGRAPCAWRAS
Trigger: AGACGCCCGCCATGCGCAAGGTGCTCTACCCCTGCCGCTTCTGCAACCAGGTGTTTGCCTTCTCGGGGGTCTTGCGTGCCCACGTGCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 90 bp GCCAGGCGGCAGGCTGGGACGGAGCCGGCTGGCTTCGTTCCACTCTaGCAGGCTGTGCGTTCAGAGGACAGCTATTTGCAGATGCCCTGG +
Preference number: 5 (lower is better)
Translates to: ARRQAGTEPAGFVPL*QAVRSEDSYLQMPW
Trigger: CCAGGGCATCTGCAAATAGCTGTCCTCTGAACGCACAGCCTGGCAGAGTGGAACGAAGCCAGCCGGCTCCGTCCCAGCCTGCCGCCTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 90 bp CTCTCGATGTCCTGCTCGGGCACGTGCAGGTGCTGCTTGAGGATGTaGTGGATGCAGTTGCGCTTGGCCGCGAACGCGGCGCTGCACTCC +
Preference number: 5 (lower is better)
Translates to: LSMSCSGTCRCCLRM*WMQLRLAANAALHS
Trigger: GGAGTGCAGCGCCGCGTTCGCGGCCAAGCGCAACTGCATCCACCACATCCTCAAGCAGCACCTGCACGTGCCCGAGCAGGACATCGAGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS CCA 90 bp CCCTCAGCAGCTTGTCTTCTGGGGGACTGCCCTGCTCTTCATCACTaGGCCCATGGTGGTCGGCAGGGGCTCCGGCCACCTCATCCTGAG +
Preference number: 5 (lower is better)
Translates to: PSAACLLGDCPALHH*AHGGRQGLRPPHPE
Trigger: CTCAGGATGAGGTGGCCGGAGCCCCTGCCGACCACCATGGGCCCAGTGATGAAGAGCAGGGCAGTCCCCCAGAAGACAAGCTGCTGAGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 90 bp TGCCTGGCAACTCTCTTCTTACGGGCCACCCCTCAGCCACAGCTGTaGGGCCAGCGAAGTGAGAGCCTGCCCAGAGGGGCCAAGTCCCTG +
Preference number: 5 (lower is better)
Translates to: CLATLFLRATPQPQL*GQRSESLPRGAKSL
Trigger: CAGGGACTTGGCCCCTCTGGGCAGGCTCTCACTTCGCTGGCCCCACAGCTGTGGCTGAGGGGTGGCCCGTAAGAAGAGAGTTGCCAGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS-3UTR CAA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCATGGCGGGCGTCTTCTaGCCGCCGGGCGCTGTCATG +
Preference number: 5 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGMAGVF*PPGAVM
Trigger: CATGACAGCGCCCGGCGGCAAGAAGACGCCCGCCAT...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGTGTTACTGCCAGTGCTaGCGGGCCCTGGGTCCGCCA +
Preference number: 5 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVCYCQC*RALGPP
Trigger: TGGCGGACCCAGGGCCCGCAAGCACTGGCAGTAACA...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCACCCCGCCGCTGTaGGCGCGGGGTCGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLSTPPL*ARGRLL
Trigger: GAGGAGCCGACCCCGCGCCAACAGCGGCGGGGTGGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGCAGCTGTGGCCAGGATaGGGTGGGCAGGCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVQLWPG*GGQASC
Trigger: GCAAGAGGCCTGCCCACCCAATCCTGGCCACAGCTG...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCTCTCCCTTCTCGTCCTaGGGCTCCTGGCGGCCGTGC +
Preference number: 5 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGSPFSS*GSWRPC
Trigger: GCACGGCCGCCAGGAGCCCAAGGACGAGAAGGGAGA...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS TCA 90 bp TGCAGTCCTTGGTGGCACTGGCCAAGCCCTCCTTCCGGCTCCGGGTaGCAGCCATGTGGTTGCTGGCATTGGGAGCCAGCTCAGCCTCGT +
Preference number: 5 (lower is better)
Translates to: CSPWWHWPSPPSGSG*QPCGCWHWEPAQPR
Trigger: ACGAGGCTGAGCTGGCTCCCAATGCCAGCAACCACATGGCTGTCACCCGGAGCCGGAAGGAGGGCTTGGCCAGTGCCACCAAGGACTGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS TCA 90 bp CATCCGACAGCTGCACTAATCTCTCCCAGTTGCTGCGAGCAACAGTaGTGGCCCTGTGACAGGGCCCTGGCCAGGCAGCCGTCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: HPTAALISPSCCEQQ*WPCDRALARQPSLP
Trigger: GGGGAGGGACGGCTGCCTGGCCAGGGCCCTGTCACAGGGCCATCACTGTTGCTCGCAGCAACTGGGAGAGATTAGTGCAGCTGTCGGATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 90 bp TGTCGGCGGCGATGTAGTCGCAGATGTTGCACTGGTATGGCGAGATaGCCAGGTGGGAGCGCACGTGGGCACGCAAGACCCCCGAGAAGG +
Preference number: 5 (lower is better)
Translates to: CRRRCSRRCCTGMAR*PGGSARGHARPPRR
Trigger: CCTTCTCGGGGGTCTTGCGTGCCCACGTGCGCTCCCACCTGGGCATCTCGCCATACCAGTGCAACATCTGCGACTACATCGCCGCCGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 90 bp CTACTGTCCCAGTTCACCGCCTGGCTAGGCCCCGCTGGCGCAGGCTaGCCCAGGCCTCCTATGATAGCAGCCTATTATGGGGATCGGCAG +
Preference number: 5 (lower is better)
Translates to: LLSQFTAWLGPAGAG*PRPPMIAAYYGDRQ
Trigger: CTGCCGATCCCCATAATAGGCTGCTATCATAGGAGGCCTGGGGCAGCCTGCGCCAGCGGGGCCTAGCCAGGCGGTGAACTGGGACAGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 90 bp ACGTCTTTGGTGTGCTGCAGGCCAAGCAAGGCCAGGAAGCCCTTCTaGTCCAGGGCGTCACCAGGCAGGGGCGTGGCCTGCGGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: TSLVCCRPSKARKPF*SRASPGRGVACGFS
Trigger: AGAAAAGCCGCAGGCCACGCCCCTGCCTGGTGACGCCCTGGACCAGAAGGGCTTCCTGGCCTTGCTTGGCCTGCAGCACACCAAAGACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CCA 90 bp TCGATGTCCTGCTCGGGCACGTGCAGGTGCTGCTTGAGGATGTGGTaGATGCAGTTGCGCTTGGCCGCGAACGCGGCGCTGCACTCCTTG +
Preference number: 5 (lower is better)
Translates to: SMSCSGTCRCCLRMW*MQLRLAANAALHSL
Trigger: CAAGGAGTGCAGCGCCGCGTTCGCGGCCAAGCGCAACTGCATCCACCACATCCTCAAGCAGCACCTGCACGTGCCCGAGCAGGACATCGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS CCA 90 bp GTGGCACTGGCCAAGCCCTCCTTCCGGCTCCGGGTGACAGCCATGTaGTTGCTGGCATTGGGAGCCAGCTCAGCCTCGTTCTCTGAGACG +
Preference number: 5 (lower is better)
Translates to: VALAKPSFRLRVTAM*LLALGASSASFSET
Trigger: CGTCTCAGAGAACGAGGCTGAGCTGGCTCCCAATGCCAGCAACCACATGGCTGTCACCCGGAGCCGGAAGGAGGGCTTGGCCAGTGCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 90 bp AGCTTGAAGTCCATGAGCTTGGTGGCGAAGTCCAGGTCCAGGCTCTaGTTGCTCGACGCGTCCTCTTCCGCGCCGTCGGCGTCCCCAGTG +
Preference number: 5 (lower is better)
Translates to: SLKSMSLVAKSRSRL*LLDASSSAPSASPV
Trigger: CACTGGGGACGCCGACGGCGCGGAAGAGGACGCGTCGAGCAACCAGAGCCTGGACCTGGACTTCGCCACCAAGCTCATGGACTTCAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGGCCTCCACTGAGCCTTaGAGGAGCTTCAGGGGCGGT +
Preference number: 5 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVASTEP*RSFRGG
Trigger: ACCGCCCCTGAAGCTCCTCAAAGGCTCAGTGGAGGC...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGAAGGGCTTGCGGCCCTaGTGGCCCCCGCCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: CLITVEELPPEGANHNRRKGLRP*WPPPRP
Trigger: CGGCCTGGGCGGGGGCCACAAGGGCCGCAAGCCCTT...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp TGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTTCCACCCCGCCGCTGTaGGCGCGGGGTCGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: CFAFSKVISAVLQARPWLSTPPL*ARGRLL
Trigger: GAGGAGCCGACCCCGCGCCAACAGCGGCGGGGTGGA...AAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCACCCCGCCGCTGTaGGCGCGGGGTCGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLSTPPL*ARGRLL
Trigger: GAGGAGCCGACCCCGCGCCAACAGCGGCGGGGTGGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp CTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGCTGCGGGTGGGCAGGCCTCTaGCTGCGCGGCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: LDACSLDACILTPPSLSCGWAGL*LRGSSR
Trigger: CCTGCTGGAGCCGCGCAGCAAGAGGCCTGCCCACCC...GCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGAGGTCCAGGCTCTGGTaGCTCGACGCGTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVRSRLW*LDASSS
Trigger: GGAAGAGGACGCGTCGAGCAACCAGAGCCTGGACCT...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS GCA 90 bp TGTACGAGTTCCGCTTGGCCCTCAGCAGCTTGTCTTCTGGGGGACTaGCCTGCTCTTCATCACTGGGCCCATGGTGGTCGGCAGGGGCTC +
Preference number: 5 (lower is better)
Translates to: CTSSAWPSAACLLGD*PALHHWAHGGRQGL
Trigger: GAGCCCCTGCCGACCACCATGGGCCCAGTGATGAAGAGCAGGGCAGTCCCCCAGAAGACAAGCTGCTGAGGGCCAAGCGGAACTCGTACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 90 bp GGGCTTTGGCTTCAGAGGGGGCATGTGCTTGAAGATCGCCTGCAGTaGGGCGGCAGGGGCCTTGGAGAAGGGCGGAAGACTGATCTGAGG +
Preference number: 5 (lower is better)
Translates to: GLWLQRGHVLEDRLQ*GGRGLGEGRKTDLR
Trigger: CCTCAGATCAGTCTTCCGCCCTTCTCCAAGGCCCCTGCCGCCCCACTGCAGGCGATCTTCAAGCACATGCCCCCTCTGAAGCCAAAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CCA 90 bp TGGTGGCGGCTTTGGGGACAGAACCTCCTAAGCTGTCTGAAGCCGTaGTGTTACTGCCAGTGCTTGCGGGCCCTGGGTCCGCCACCTTGG +
Preference number: 5 (lower is better)
Translates to: WWRLWGQNLLSCLKP*CYCQCLRALGPPPW
Trigger: CCAAGGTGGCGGACCCAGGGCCCGCAAGCACTGGCAGTAACACCACGGCTTCAGACAGCTTAGGAGGTTCTGTCCCCAAAGCCGCCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 90 bp CCTCCTCACCCCGCTCTTCCTTGTCGCTGTCCTTCCCGTGGTGTTTaGCATGCCTGGCTTTCTGGTGGATCCGCTGGTGGCGAACCAGGC +
Preference number: 5 (lower is better)
Translates to: PPHPALPCRCPSRGV*HAWLSGGSAGGEPG
Trigger: GCCTGGTTCGCCACCAGCGGATCCACCAGAAAGCCAGGCATGCCAAACACCACGGGAAGGACAGCGACAAGGAAGAGCGGGGTGAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 90 bp AGCTTGAAGTCCATGAGCTTGGTGGCGAAGTCCAGGTCCAGGCTCTaGTTGCTCGACGCGTCCTCTTCCGCCGTCGGCGTCCCCAGTGCT +
Preference number: 5 (lower is better)
Translates to: SLKSMSLVAKSRSRL*LLDASSSAVGVPSA
Trigger: AGCACTGGGGACGCCGACGGCGGAAGAGGACGCGTCGAGCAACCAGAGCCTGGACCTGGACTTCGCCACCAAGCTCATGGACTTCAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611109.1
CDS-3UTR CAA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGGGCGGCAGGGGCCTaGGAGAAGGGCGGAAGACTG +
Preference number: 5 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLGAAGA*EKGGRL
Trigger: CAGTCTTCCGCCCTTCTCCAAGGCCCCTGCCGCCCC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTATGGCGGGCGTCTTCTaGCCGCCGGGCGCTGTCATG +
Preference number: 5 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSMAGVF*PPGAVM
Trigger: CATGACAGCGCCCGGCGGCAAGAAGACGCCCGCCAT...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAGGGCTTGCGGCCCTaGTGGCCCCCGCCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSKGLRP*WPPPRP
Trigger: CGGCCTGGGCGGGGGCCACAAGGGCCGCAAGCCCTT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp GGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAATGTGGTGGATGCAGTaGCGCTTGGCCGCGAACGCG +
Preference number: 5 (lower is better)
Translates to: GPGAQVQWGTFSSLQAETMWWMQ*RLAANA
Trigger: CGCGTTCGCGGCCAAGCGCAACTGCATCCACCACAT...TGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCATGTGGTGGATGCAGTaGCGCTTGGCCGCGAACGCG +
Preference number: 5 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGMWWMQ*RLAANA
Trigger: CGCGTTCGCGGCCAAGCGCAACTGCATCCACCACAT...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGGGGCTGAGGAGTAGATaGGGACCGCCAGCTGAACAG +
Preference number: 5 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVGLRSR*GPPAEQ
Trigger: CTGTTCAGCTGGCGGTCCCAATCTACTCCTCAGCCC...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCGCGGTGGTGGCGGCTTaGGGGACAGAACCTCCTAAG +
Preference number: 5 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGAVVAA*GTEPPK
Trigger: CTTAGGAGGTTCTGTCCCCAAAGCCGCCACCACCGC...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCACCCCGCCGCTGTaGGCGCGGGGTCGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSSTPPL*ARGRLL
Trigger: GAGGAGCCGACCCCGCGCCAACAGCGGCGGGGTGGA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTTGGCCCTCAGCAGCTaGTCTTCTGGGGGACTGCCC +
Preference number: 5 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLLALSS*SSGGLP
Trigger: GGGCAGTCCCCCAGAAGACAAGCTGCTGAGGGCCAA...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGTCTGAGACGGCGTTGTaGCCGCTGTGGGTGGACTCA +
Preference number: 5 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVSETAL*PLWVDS
Trigger: TGAGTCCACCCACAGCGGCAACAACGCCGTCTCAGA...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp CTGAGGGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGTCTGAGACGGCGTTGTaGCCGCTGTGGGTGGACTCA +
Preference number: 5 (lower is better)
Translates to: LRDQELRCSGVHSPPCRRSETAL*PLWVDS
Trigger: TGAGTCCACCCACAGCGGCAACAACGCCGTCTCAGA...CCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCCCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGAGCGACCAGAACCGCTaGTTGCACACGCTGCAGACC +
Preference number: 5 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVSDQNR*LHTLQT
Trigger: GGTCTGCAGCGTGTGCAACAAGCGGTTCTGGTCGCT...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS GCA 90 bp ACACGGTGTCCGGGGCGCAGAAGGCGTCCACCAGCTCGGCCGCGCTaGTACTCACATACTCGATGTTCTTCTCGATATCCTTGCGGGTGG +
Preference number: 5 (lower is better)
Translates to: TRCPGRRRRPPARPR*YSHTRCSSRYPCGW
Trigger: CCACCCGCAAGGATATCGAGAAGAACATCGAGTATGTGAGTAGCAGCGCGGCCGAGCTGGTGGACGCCTTCTGCGCCCCGGACACCGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 90 bp TCACCCCGCTCTTCCTTGTCGCTGTCCTTCCCGTGGTGTTTGGCATaGCTGGCTTTCTGGTGGATCCGCTGGTGGCGAACCAGGCTGTGC +
Preference number: 5 (lower is better)
Translates to: SPRSSLSLSFPWCLA*LAFWWIRWWRTRLC
Trigger: GCACAGCCTGGTTCGCCACCAGCGGATCCACCAGAAAGCCAGGCATGCCAAACACCACGGGAAGGACAGCGACAAGGAAGAGCGGGGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 90 bp TGGCATTGGGAGCCAGCTCAGCCTCGTTCTCTGAGACGGCGTTGTTaGCGCTGTGGGTGGACTCATTCTCGCTGTCCTCCTCACCCCGCT +
Preference number: 5 (lower is better)
Translates to: WHWEPAQPRSLRRRC*RCGWTHSRCPPHPA
Trigger: AGCGGGGTGAGGAGGACAGCGAGAATGAGTCCACCCACAGCGGCAACAACGCCGTCTCAGAGAACGAGGCTGAGCTGGCTCCCAATGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 90 bp ACAGTCGGAGCAACCCTGATAAGTAGACACATCACGTGTTGCTCCTaGGAGTCTCCTGGGGACGTGTTACTGAGCGGCCGCGGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: TVGATLISRHITCCS*ESPGDVLLSGRGGG
Trigger: GCCGCCGCCGCGGCCGCTCAGTAACACGTCCCCAGGAGACTCGCAGGAGCAACACGTGATGTGTCTACTTATCAGGGTTGCTCCGACTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379933.7
CDS CCA 90 bp TCGCTGTCCTCCTCACCCCGCTCTTCCTTGTCGCTGTCCTTCCCGTaGTGTTTGGCATGCCTGGCTTTCTGGTGGATCCGCTGGTGGCGA +
Preference number: 5 (lower is better)
Translates to: SLSSSPRSSLSLSFP*CLACLAFWWIRWWR
Trigger: TCGCCACCAGCGGATCCACCAGAAAGCCAGGCATGCCAAACACCACGGGAAGGACAGCGACAAGGAAGAGCGGGGTGAGGAGGACAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 90 bp AGGGTGTGTAGTGGCTACCGAAGCTGGGTGGGCCACTCCTTGCTCTaGGCCTTGGGTGGGGGACAGGGTAGTCCTGACCAAGGCTTCTGT +
Preference number: 5 (lower is better)
Translates to: RVCSGYRSWVGHSLL*ALGGGQGSPDQGFC
Trigger: ACAGAAGCCTTGGTCAGGACTACCCTGTCCCCCACCCAAGGCCCAGAGCAAGGAGTGGCCCACCCAGCTTCGGTAGCCACTACACACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS-3UTR CAA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCGCCACATGGGTCTGCTaGTGCAGAGCCAGTGAGCAG +
Preference number: 5 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLATWVC*CRASEQ
Trigger: CTGCTCACTGGCTCTGCACAAGCAGACCCATGTGGC...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGGGCGGCAGGGGCCTaGGAGAAGGGCGGAAGACTG +
Preference number: 5 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLGAAGA*EKGGRL
Trigger: CAGTCTTCCGCCCTTCTCCAAGGCCCCTGCCGCCCC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCAGAGGGGGCATGTGCTaGAAGATCGCCTGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLRGGMC*KIACSG
Trigger: CCCACTGCAGGCGATCTTCAAGCACATGCCCCCTCT...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCAGCAGGTGGGCGTaGGAGGCCGCCTCCACTGAG +
Preference number: 5 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLCSRWA*EAASTE
Trigger: CTCAGTGGAGGCGGCCTCCAACGCCCACCTGCTGCA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp CTGAGGGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGATCTCCTGCTTGATCTaGGCCTCCATGCTCAGCGGC +
Preference number: 5 (lower is better)
Translates to: LRDQELRCSGVHSPPCRRISCLI*ASMLSG
Trigger: GCCGCTGAGCATGGAGGCCAAGATCAAGCAGGAGAT...CCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCCCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTGCCTTGAGGTGCTTCTaGCGCAGGTGCCGCTCGCAG +
Preference number: 5 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSALRCF*RRCRSQ
Trigger: CTGCGAGCGGCACCTGCGCAAGAAGCACCTCAAGGC...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGCACTCGAAGGGCTaGCGGCCCTTGTGGCCCCCG +
Preference number: 5 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLLHSKG*RPLWPP
Trigger: CGGGGGCCACAAGGGCCGCAAGCCCTTCGAGTGCAA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCGGCGCTGCACTCCTaGCACTCGAAGGGCTTGCGG +
Preference number: 5 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLAALHS*HSKGLR
Trigger: CCGCAAGCCCTTCGAGTGCAAGGAGTGCAGCGCCGC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCGGCGCTGCACTCCTaGCACTCGAAGGGCTTGCGG +
Preference number: 5 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSAALHS*HSKGLR
Trigger: CCGCAAGCCCTTCGAGTGCAAGGAGTGCAGCGCCGC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCCTGGCGGGCTCCAACTaGATCGAGACATGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLLAGSN*IETWGG
Trigger: ACCTCCCCATGTCTCGATCAAGTTGGAGCCCGCCAG...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCCTGGCGGGCTCCAACTaGATCGAGACATGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGLAGSN*IETWGG
Trigger: ACCTCCCCATGTCTCGATCAAGTTGGAGCCCGCCAG...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGGTGTACGAGTTCCGCTaGGCCCTCAGCAGCTTGTCT +
Preference number: 5 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVVYEFR*ALSSLS
Trigger: AGACAAGCTGCTGAGGGCCAAGCGGAACTCGTACAC...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp CACAGCTGGGTAAGGCTTGGATTAGGCTTAGCAGGAAGACTGGGAATACCTCGCGGGTGGGCAGGCCTCTaGCTGCGCGGCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: HSWVRLGLGLAGRLGIPRGWAGL*LRGSSR
Trigger: CCTGCTGGAGCCGCGCAGCAAGAGGCCTGCCCACCC...GCGAGGTATTCCCAGTCTTCCTGCTAAGCCTAATCCAAGCCTTACCCAGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCGCCCTCCGCCAGCTaGAAGTCCATGAGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLSPSAS*KSMSLV
Trigger: CACCAAGCTCATGGACTTCAAGCTGGCGGAGGGCGA...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS TCA 90 bp GGCTCAGCAGGTTGGTGCAGCCGGGGTCCTGAGGTAGCTGACACTTaGGTGTCTGGAGCTGAATTGCCTGGTTGTCATCCGGCAGGGGCT +
Preference number: 5 (lower is better)
Translates to: GSAGWCSRGPEVADT*VSGAELPGCHPAGA
Trigger: AGCCCCTGCCGGATGACAACCAGGCAATTCAGCTCCAGACACTCAAGTGTCAGCTACCTCAGGACCCCGGCTGCACCAACCTGCTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS TCA 90 bp TCACTGGGCCCATGGTGGTCGGCAGGGGCTCCGGCCACCTCATCCTaGGTGTTGTCCTCCGCTGTCTGCAGAAACGGACTGAACTTGTTG +
Preference number: 5 (lower is better)
Translates to: SLGPWWSAGAPATSS*VLSSAVCRNGLNLL
Trigger: CAACAAGTTCAGTCCGTTTCTGCAGACAGCGGAGGACAACACTCAGGATGAGGTGGCCGGAGCCCCTGCCGACCACCATGGGCCCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS TCA 90 bp ACAGACGGGCTCAGAGACAGCCTGTATTCACTGCAGCACTGGCTCTaGAGGCTGCTGGGTAGGAACGTGAGCAGGAGCTGGGGTCCCCTG +
Preference number: 5 (lower is better)
Translates to: TDGLRDSLYSLQHWL*RLLGRNVSRSWGPL
Trigger: CAGGGGACCCCAGCTCCTGCTCACGTTCCTACCCAGCAGCCTTCAGAGCCAGTGCTGCAGTGAATACAGGCTGTCTCTGAGCCCGTCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 90 bp GGACAGAACCTCCTAAGCTGTCTGAAGCCGTGGTGTTACTGCCAGTaGTTGCGGGCCCTGGGTCCGCCACCTTGGTTTTCAGCAGGGTGG +
Preference number: 5 (lower is better)
Translates to: GQNLLSCLKPWCYCQ*LRALGPPPWFSAGW
Trigger: CCACCCTGCTGAAAACCAAGGTGGCGGACCCAGGGCCCGCAAGCACTGGCAGTAACACCACGGCTTCAGACAGCTTAGGAGGTTCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 90 bp GCCGGGTCAGGTCCTGCAGCGACCAGAACCGCTTGTTGCACACGCTaGAGACCTTCTTCCTCTTGTCTGCCTTGCTGGCCACGCTTTTGG +
Preference number: 5 (lower is better)
Translates to: AGSGPAATRTACCTR*RPSSSCLPCWPRFW
Trigger: CCAAAAGCGTGGCCAGCAAGGCAGACAAGAGGAAGAAGGTCTGCAGCGTGTGCAACAAGCGGTTCTGGTCGCTGCAGGACCTGACCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 90 bp AGCGCATGTGCCGGGTCAGGTCCTGCAGCGACCAGAACCGCTTGTTaGACACGCTGCAGACCTTCTTCCTCTTGTCTGCCTTGCTGGCCA +
Preference number: 5 (lower is better)
Translates to: SACAGSGPAATRTAC*TRCRPSSSCLPCWP
Trigger: TGGCCAGCAAGGCAGACAAGAGGAAGAAGGTCTGCAGCGTGTGCAACAAGCGGTTCTGGTCGCTGCAGGACCTGACCCGGCACATGCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 90 bp TATGGCCTTTCCCCTGTGTGGGAGCGCATGTGCCGGGTCAGGTCCTaGAGCGACCAGAACCGCTTGTTGCACACGCTGCAGACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: YGLSPVWERMCRVRS*SDQNRLLHTLQTFF
Trigger: GAAGAAGGTCTGCAGCGTGTGCAACAAGCGGTTCTGGTCGCTGCAGGACCTGACCCGGCACATGCGCTCCCACACAGGGGAAAGGCCATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 90 bp CAGATGTTGCACTGGTATGGCGAGATGCCCAGGTGGGAGCGCACGTaGGCACGCAAGACCCCCGAGAAGGCAAACACCTGGTTGCAGAAG +
Preference number: 5 (lower is better)
Translates to: QMLHWYGEMPRWERT*ARKTPEKANTWLQK
Trigger: CTTCTGCAACCAGGTGTTTGCCTTCTCGGGGGTCTTGCGTGCCCACGTGCGCTCCCACCTGGGCATCTCGCCATACCAGTGCAACATCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CCA 90 bp CCCGCTCTTCCTTGTCGCTGTCCTTCCCGTGGTGTTTGGCATGCCTaGCTTTCTGGTGGATCCGCTGGTGGCGAACCAGGCTGTGCTTCA +
Preference number: 5 (lower is better)
Translates to: PALPCRCPSRGVWHA*LSGGSAGGEPGCAS
Trigger: TGAAGCACAGCCTGGTTCGCCACCAGCGGATCCACCAGAAAGCCAGGCATGCCAAACACCACGGGAAGGACAGCGACAAGGAAGAGCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGTCGCCAGAGATGGGCTaGACCACAATGCTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVSPEMG*TTMLLS
Trigger: TGACAGCAGCATTGTGGTCAAGCCCATCTCTGGCGA...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AAGACTGGGAATACCTCGCTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTGGGGCGGCAGGGGCCTaGGAGAAGGGCGGAAGACTG +
Preference number: 5 (lower is better)
Translates to: KTGNTSLTSNVPGHWVTAGAAGA*EKGGRL
Trigger: CAGTCTTCCGCCCTTCTCCAAGGCCCCTGCCGCCCC...AGCAGTGACCCAGTGACCAGGCACATTACTCGTGAGCGAGGTATTCCCAGTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp TGGCTTCTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGGAAGCCTGCTGGGCGTaGATGAGAGGCGGGGGCGTG +
Preference number: 5 (lower is better)
Translates to: WLLDACSLDACILTPPSLEACWA*MRGGGV
Trigger: CACGCCCCCGCCTCTCATCAACGCCCAGCAGGCTTC...CAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAGAAGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGAAGCCTGCTGGGCGTaGATGAGAGGCGGGGGCGTG +
Preference number: 5 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLEACWA*MRGGGV
Trigger: CACGCCCCCGCCTCTCATCAACGCCCAGCAGGCTTC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCAGCAGGTGGGCGTaGGAGGCCGCCTCCACTGAG +
Preference number: 5 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLCSRWA*EAASTE
Trigger: CTCAGTGGAGGCGGCCTCCAACGCCCACCTGCTGCA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCATCTCCTGCTTGATCTaGGCCTCCATGCTCAGCGGC +
Preference number: 5 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLISCLI*ASMLSG
Trigger: GCCGCTGAGCATGGAGGCCAAGATCAAGCAGGAGAT...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATGGCGGGCGTCTTCTaGCCGCCGGGCGCTGTCATG +
Preference number: 5 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLMAGVF*PPGAVM
Trigger: CATGACAGCGCCCGGCGGCAAGAAGACGCCCGCCAT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp CCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACTTGCACTCGAAGGGCTaGCGGCCCTTGTGGCCCCCG +
Preference number: 5 (lower is better)
Translates to: PGPCLGRLLTAPSKFCSDLHSKG*RPLWPP
Trigger: CGGGGGCCACAAGGGCCGCAAGCCCTTCGAGTGCAA...GTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCGGCGCTGCACTCCTaGCACTCGAAGGGCTTGCGG +
Preference number: 5 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLAALHS*HSKGLR
Trigger: CCGCAAGCCCTTCGAGTGCAAGGAGTGCAGCGCCGC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp TGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTTGGATGCAGTTGCGCTaGGCCGCGAACGCGGCGCTG +
Preference number: 5 (lower is better)
Translates to: CFAFSKVISAVLQARPWLWMQLR*AANAAL
Trigger: CAGCGCCGCGTTCGCGGCCAAGCGCAACTGCATCCA...AAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTTCCTCCTCAGGCTTCTaGGCTTCGCTGGGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSSSSGF*ASLGVA
Trigger: GGCCACTCCCAGCGAAGCCAAGAAGCCTGAGGAGGA...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTGGGTCCGCCACCTaGGTTTTCAGCAGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSPGSAT*VFSRVG
Trigger: CCCCACCCTGCTGAAAACCAAGGTGGCGGACCCAGG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTGGGTCCGCCACCTaGGTTTTCAGCAGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLPGSAT*VFSRVG
Trigger: CCCCACCCTGCTGAAAACCAAGGTGGCGGACCCAGG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTACTGCCAGTGCTaGCGGGCCCTGGGTCCGCCA +
Preference number: 5 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLCYCQC*RALGPP
Trigger: TGGCGGACCCAGGGCCCGCAAGCACTGGCAGTAACA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTCTCGTCCTaGGGCTCCTGGCGGCCGTGC +
Preference number: 5 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLSPFSS*GSWRPC
Trigger: GCACGGCCGCCAGGAGCCCAAGGACGAGAAGGGAGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGCCCTGGCATGATGCGTaGGGGACCGGTGGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLPWHDA*GTGGLQ
Trigger: CTGAAGCCCACCGGTCCCCAACGCATCATGCCAGGG...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS TCA 90 bp AGCCATGTGGTTGCTGGCATTGGGAGCCAGCTCAGCCTCGTTCTCTaGGACGGCGTTGTTGCCGCTGTGGGTGGACTCATTCTCGCTGTC +
Preference number: 5 (lower is better)
Translates to: SHVVAGIGSQLSLVL*DGVVAAVGGLILAV
Trigger: GACAGCGAGAATGAGTCCACCCACAGCGGCAACAACGCCGTCTCAGAGAACGAGGCTGAGCTGGCTCCCAATGCCAGCAACCACATGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 90 bp AGGCTGGGACGGAGCCGGCTGGCTTCGTTCCACTCTGCCAGGCTGTaGGTTCAGAGGACAGCTATTTGCAGATGCCCTGGCTCCTTATGT +
Preference number: 5 (lower is better)
Translates to: RLGRSRLASFHSARL*VQRTAICRCPGSLC
Trigger: ACATAAGGAGCCAGGGCATCTGCAAATAGCTGTCCTCTGAACGCACAGCCTGGCAGAGTGGAACGAAGCCAGCCGGCTCCGTCCCAGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 90 bp ATGTGCCTCTGTAGGGAGCTGGCCCAAGGGAAAACCCGGGGACAGTaGGGACAGGTGATCTTCTGCAGGCAGTTGGTGTACGAGTTCCGC +
Preference number: 5 (lower is better)
Translates to: MCLCRELAQGKTRGQ*GQVIFCRQLVYEFR
Trigger: GCGGAACTCGTACACCAACTGCCTGCAGAAGATCACCTGTCCCCACTGTCCCCGGGTTTTCCCTTGGGCCAGCTCCCTACAGAGGCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 90 bp TTCCCGTGGTGTTTGGCATGCCTGGCTTTCTGGTGGATCCGCTGGTaGCGAACCAGGCTGTGCTTCAAGGTGAAGGTTCGCTCGCAGGTC +
Preference number: 5 (lower is better)
Translates to: FPWCLACLAFWWIRW*RTRLCFKVKVRSQV
Trigger: GACCTGCGAGCGAACCTTCACCTTGAAGCACAGCCTGGTTCGCCACCAGCGGATCCACCAGAAAGCCAGGCATGCCAAACACCACGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 90 bp TCCTTCCCGTGGTGTTTGGCATGCCTGGCTTTCTGGTGGATCCGCTaGTGGCGAACCAGGCTGTGCTTCAAGGTGAAGGTTCGCTCGCAG +
Preference number: 5 (lower is better)
Translates to: SFPWCLACLAFWWIR*WRTRLCFKVKVRSQ
Trigger: CTGCGAGCGAACCTTCACCTTGAAGCACAGCCTGGTTCGCCACCAGCGGATCCACCAGAAAGCCAGGCATGCCAAACACCACGGGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 90 bp GCGTCCAGTGCAATGCCCATCTCCAACCTCTGTGCAGAGGAAGCCTaGCCTCTCCCTGGAGCAGGTCCTTGTTCAGAGGATTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: ASSAMPISNLCAEEA*PLPGAGPCSEDCSR
Trigger: CCTGGAGCAATCCTCTGAACAAGGACCTGCTCCAGGGAGAGGCCAGGCTTCCTCTGCACAGAGGTTGGAGATGGGCATTGCACTGGACGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 90 bp CCAAGGACGTGCGTGGCCCAGATTCTCTTGCTGGCCGGGCTGACCTaGATGCTTCTCCCAGCTGACTTCATTCACAGCAGGGTATGGCCA +
Preference number: 5 (lower is better)
Translates to: PRTCVAQILLLAGLT*MLLPADFIHSRVWP
Trigger: TGGCCATACCCTGCTGTGAATGAAGTCAGCTGGGAGAAGCATCCAGGTCAGCCCGGCCAGCAAGAGAATCTGGGCCACGCACGTCCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS-3UTR CAA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTAGCCAGCGGGCGAACTaGACGTCATTGGGACAGGGG +
Preference number: 5 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSSQRAN*TSLGQG
Trigger: CCCCTGTCCCAATGACGTCAAGTTCGCCCGCTGGCT...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCTTCTGCCAATCCGATTaGGTCCTGGAGGCTTCGAGG +
Preference number: 5 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGFCQSD*VLEASR
Trigger: CCTCGAAGCCTCCAGGACCAAATCGGATTGGCAGAA...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTGCAGGCCTGACGTCTTaGGTGTGCTGCAGGCCAAGC +
Preference number: 5 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSAGLTS*VCCRPS
Trigger: GCTTGGCCTGCAGCACACCAAAGACGTCAGGCCTGC...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp GGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGTCTGGAGCTGAATaGCCTGGTTGTCATCCGGCA +
Preference number: 5 (lower is better)
Translates to: GPGAQVQWGTFSSLQAETVSGAE*PGCHPA
Trigger: TGCCGGATGACAACCAGGCAATTCAGCTCCAGACAC...TGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTGCCTCCACTGAGCCTTaGAGGAGCTTCAGGGGCGGT +
Preference number: 5 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSASTEP*RSFRGG
Trigger: ACCGCCCCTGAAGCTCCTCAAAGGCTCAGTGGAGGC...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGCAGCAGGTGGGCGTaGGAGGCCGCCTCCACTGAG +
Preference number: 5 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSCSRWA*EAASTE
Trigger: CTCAGTGGAGGCGGCCTCCAACGCCCACCTGCTGCA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp AAGACTGGGAATACCTCGCTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTGCAGCAGGTGGGCGTaGGAGGCCGCCTCCACTGAG +
Preference number: 5 (lower is better)
Translates to: KTGNTSLTSNVPGHWVTACSRWA*EAASTE
Trigger: CTCAGTGGAGGCGGCCTCCAACGCCCACCTGCTGCA...AGCAGTGACCCAGTGACCAGGCACATTACTCGTGAGCGAGGTATTCCCAGTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCGCTGTCATGAAGGCCTaGAGTTCCCCCTCTGTGATC +
Preference number: 5 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLAVMKA*SSPSVI
Trigger: GATCACAGAGGGGGAACTCAAGGCCTTCATGACAGC...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGGCGGGCGTCTTCTaGCCGCCGGGCGCTGTCATG +
Preference number: 5 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSMAGVF*PPGAVM
Trigger: CATGACAGCGCCCGGCGGCAAGAAGACGCCCGCCAT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGGATGCAGTTGCGCTaGGCCGCGAACGCGGCGCTG +
Preference number: 5 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSWMQLR*AANAAL
Trigger: CAGCGCCGCGTTCGCGGCCAAGCGCAACTGCATCCA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGCCTTTCCTGAAGTTCTaGGGGATGGACAGGTCGATG +
Preference number: 5 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVPFLKF*GMDRSM
Trigger: CATCGACCTGTCCATCCCCAAGAACTTCAGGAAAGG...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp CCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACCCTGGGTCCGCCACCTaGGTTTTCAGCAGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: PGPCLGRLLTAPSKFCSDPGSAT*VFSRVG
Trigger: CCCCACCCTGCTGAAAACCAAGGTGGCGGACCCAGG...GTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGCCTGGGTCCGCCACCTaGGTTTTCAGCAGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: CLITVEELPPEGANHNRRPGSAT*VFSRVG
Trigger: CCCCACCCTGCTGAAAACCAAGGTGGCGGACCCAGG...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTACTGCCAGTGCTaGCGGGCCCTGGGTCCGCCA +
Preference number: 5 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLCYCQC*RALGPP
Trigger: TGGCGGACCCAGGGCCCGCAAGCACTGGCAGTAACA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTGCGGTGGTGGCGGCTTaGGGGACAGAACCTCCTAAG +
Preference number: 5 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSAVVAA*GTEPPK
Trigger: CTTAGGAGGTTCTGTCCCCAAAGCCGCCACCACCGC...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTGGCCCTCAGCAGCTaGTCTTCTGGGGGACTGCCC +
Preference number: 5 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSLALSS*SSGGLP
Trigger: GGGCAGTCCCCCAGAAGACAAGCTGCTGAGGGCCAA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGTTGGCCCTCAGCAGCTaGTCTTCTGGGGGACTGCCC +
Preference number: 5 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLLALSS*SSGGLP
Trigger: GGGCAGTCCCCCAGAAGACAAGCTGCTGAGGGCCAA...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCGTGGTAACTCCGTGTTaGCGCAACTGGTGGCGTTCA +
Preference number: 5 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGVVTPC*RNWWRS
Trigger: TGAACGCCACCAGTTGCGCAAACACGGAGTTACCAC...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACCCCGCTCTTCCTaGTCGCTGTCCTTCCCGTGG +
Preference number: 5 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLSPRSS*SLSFPW
Trigger: CCACGGGAAGGACAGCGACAAGGAAGAGCGGGGTGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGTGGGCAGGCCTCTaGCTGCGCGGCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEGWAGL*LRGSSR
Trigger: CCTGCTGGAGCCGCGCAGCAAGAGGCCTGCCCACCC...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGCTGTGGCCAGGATaGGGTGGGCAGGCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLQLWPG*GGQASC
Trigger: GCAAGAGGCCTGCCCACCCAATCCTGGCCACAGCTG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGCAGCTGTGGCCAGGATaGGGTGGGCAGGCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: CLITVEELPPEGANHNRRQLWPG*GGQASC
Trigger: GCAAGAGGCCTGCCCACCCAATCCTGGCCACAGCTG...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGGTCCAGGCTCTGGTaGCTCGACGCGTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSRSRLW*LDASSS
Trigger: GGAAGAGGACGCGTCGAGCAACCAGAGCCTGGACCT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTTGAAGTCCATGAGCTaGGTGGCGAAGTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLLKSMS*VAKSRS
Trigger: GGACCTGGACTTCGCCACCAAGCTCATGGACTTCAA...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp CACAGCTGGGTAAGGCTTGGATTAGGCTTAGCAGGAAGACTGGGAATACCTCGCTCTCCCTTCTCGTCCTaGGGCTCCTGGCGGCCGTGC +
Preference number: 5 (lower is better)
Translates to: HSWVRLGLGLAGRLGIPRSPFSS*GSWRPC
Trigger: GCACGGCCGCCAGGAGCCCAAGGACGAGAAGGGAGA...GCGAGGTATTCCCAGTCTTCCTGCTAAGCCTAATCCAAGCCTTACCCAGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCCCTTCTCGTCCTaGGGCTCCTGGCGGCCGTGC +
Preference number: 5 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSSPFSS*GSWRPC
Trigger: GCACGGCCGCCAGGAGCCCAAGGACGAGAAGGGAGA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GGCTGCGGTAAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTTGCTGGCCACGCTTTaGGGGGAGTCTGTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: GCGKAMALSEQPRSCLSLLLATL*GESVFG
Trigger: ACCAAAGACAGACTCCCCCAAAAGCGTGGCCAGCAA...GAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTTACCGCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGAATAACCCTGCCTTTTaGCATCCAGGGGTGTGGGCT +
Preference number: 5 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVNNPAF*HPGVWA
Trigger: AGCCCACACCCCTGGATGCAAAAAGGCAGGGTTATT...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS TCA 90 bp TTGACCCTGGTCTGCCGCCACATGGGTCTGCTTGTGCAGAGCCAGTaGGCAGAGCATGGGGAACGCCTTGTCACAGGTGTCGCAGACAAA +
Preference number: 5 (lower is better)
Translates to: LTLVCRHMGLLVQSQ*AEHGERLVTGVADK
Trigger: TTTGTCTGCGACACCTGTGACAAGGCGTTCCCCATGCTCTGCTCACTGGCTCTGCACAAGCAGACCCATGTGGCGGCAGACCAGGGTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 90 bp CTGAGGGGGAGCCGAGGCTGCCATCTTCAGAATTTGCTGGATGTCTaGCAGCTCGATGGCCGACTCGCCAGAGATGGGCTTGACCACAAT +
Preference number: 5 (lower is better)
Translates to: LRGSRGCHLQNLLDV*QLDGRLARDGLDHN
Trigger: ATTGTGGTCAAGCCCATCTCTGGCGAGTCGGCCATCGAGCTGGCAGACATCCAGCAAATTCTGAAGATGGCAGCCTCGGCTCCCCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 90 bp CTTTGGGGACAGAACCTCCTAAGCTGTCTGAAGCCGTGGTGTTACTaGCAGTGCTTGCGGGCCCTGGGTCCGCCACCTTGGTTTTCAGCA +
Preference number: 5 (lower is better)
Translates to: LWGQNLLSCLKPWCY*QCLRALGPPPWFSA
Trigger: TGCTGAAAACCAAGGTGGCGGACCCAGGGCCCGCAAGCACTGGCAGTAACACCACGGCTTCAGACAGCTTAGGAGGTTCTGTCCCCAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 90 bp GCCGACTCGCCAGAGATGGGCTTGACCACAATGCTGCTGTCAGGCTaGATGATGAAGCCCTTCTGGAAGGGCTGCAGGGACAGGTGCTTT +
Preference number: 5 (lower is better)
Translates to: ADSPEMGLTTMLLSG*MMKPFWKGCRDRCF
Trigger: AAAGCACCTGTCCCTGCAGCCCTTCCAGAAGGGCTTCATCATCCAGCCTGACAGCAGCATTGTGGTCAAGCCCATCTCTGGCGAGTCGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CCA 90 bp TCCTTGTCGCTGTCCTTCCCGTGGTGTTTGGCATGCCTGGCTTTCTaGTGGATCCGCTGGTGGCGAACCAGGCTGTGCTTCAAGGTGAAG +
Preference number: 5 (lower is better)
Translates to: SLSLSFPWCLACLAF*WIRWWRTRLCFKVK
Trigger: CTTCACCTTGAAGCACAGCCTGGTTCGCCACCAGCGGATCCACCAGAAAGCCAGGCATGCCAAACACCACGGGAAGGACAGCGACAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 90 bp GCTGCAGCCCTCCCTGCCGTAGGTGGCTCATCTGAAACCTCTCTGTaGGCTGTTAAGCACCTGAAATGTGGCTGGTGTGGTGCAGCCAAG +
Preference number: 5 (lower is better)
Translates to: AAALPAVGGSSETSL*AVKHLKCGWCGAAK
Trigger: CTTGGCTGCACCACACCAGCCACATTTCAGGTGCTTAACAGCCCACAGAGAGGTTTCAGATGAGCCACCTACGGCAGGGAGGGCTGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS-3UTR CAA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGCCAGCGGGCGAACTaGACGTCATTGGGACAGGGG +
Preference number: 5 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLSQRAN*TSLGQG
Trigger: CCCCTGTCCCAATGACGTCAAGTTCGCCCGCTGGCT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCCACATGGGTCTGCTaGTGCAGAGCCAGTGAGCAG +
Preference number: 5 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLATWVC*CRASEQ
Trigger: CTGCTCACTGGCTCTGCACAAGCAGACCCATGTGGC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGCCTGCGGCTTTTCTaGACCCTGGTCTGCCGCCAC +
Preference number: 5 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSGLRLF*TLVCRH
Trigger: GTGGCGGCAGACCAGGGTCAAGAAAAGCCGCAGGCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp AAGACTGGGAATACCTCGCTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTGGCCTGCGGCTTTTCTaGACCCTGGTCTGCCGCCAC +
Preference number: 5 (lower is better)
Translates to: KTGNTSLTSNVPGHWVTAGLRLF*TLVCRH
Trigger: GTGGCGGCAGACCAGGGTCAAGAAAAGCCGCAGGCC...AGCAGTGACCCAGTGACCAGGCACATTACTCGTGAGCGAGGTATTCCCAGTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGCGGCAGGGGCCTaGGAGAAGGGCGGAAGACTG +
Preference number: 5 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEGAAGA*EKGGRL
Trigger: CAGTCTTCCGCCCTTCTCCAAGGCCCCTGCCGCCCC...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAAGCCTGCTGGGCGTaGATGAGAGGCGGGGGCGTG +
Preference number: 5 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSEACWA*MRGGGV
Trigger: CACGCCCCCGCCTCTCATCAACGCCCAGCAGGCTTC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCCTTGAGGTGCTTCTaGCGCAGGTGCCGCTCGCAG +
Preference number: 5 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSALRCF*RRCRSQ
Trigger: CTGCGAGCGGCACCTGCGCAAGAAGCACCTCAAGGC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTGCGGGTGGCCTaGAGGTGCTTCTTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLSLRVA*RCFLRR
Trigger: CCTGCGCAAGAAGCACCTCAAGGCCACCCGCAAGGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGTCCTTGCGGGTGGCCTaGAGGTGCTTCTTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: CLITVEELPPEGANHNRRSLRVA*RCFLRR
Trigger: CCTGCGCAAGAAGCACCTCAAGGCCACCCGCAAGGA...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGGATGCAGTTGCGCTaGGCCGCGAACGCGGCGCTG +
Preference number: 5 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSWMQLR*AANAAL
Trigger: CAGCGCCGCGTTCGCGGCCAAGCGCAACTGCATCCA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATGTGGTGGATGCAGTaGCGCTTGGCCGCGAACGCG +
Preference number: 5 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLMWWMQ*RLAANA
Trigger: CGCGTTCGCGGCCAAGCGCAACTGCATCCACCACAT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGTCCTCCTCAGGCTTCTaGGCTTCGCTGGGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: CLITVEELPPEGANHNRRSSSGF*ASLGVA
Trigger: GGCCACTCCCAGCGAAGCCAAGAAGCCTGAGGAGGA...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCCTCAGGCTTCTaGGCTTCGCTGGGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLSSSGF*ASLGVA
Trigger: GGCCACTCCCAGCGAAGCCAAGAAGCCTGAGGAGGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCGGGCTGAGGAGTAGATaGGGACCGCCAGCTGAACAG +
Preference number: 5 (lower is better)
Translates to: ALLSPKSSLQCSRHGPGFGLRSR*GPPAEQ
Trigger: CTGTTCAGCTGGCGGTCCCAATCTACTCCTCAGCCC...GAAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTGGGTCCGCCACCTaGGTTTTCAGCAGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSPGSAT*VFSRVG
Trigger: CCCCACCCTGCTGAAAACCAAGGTGGCGGACCCAGG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp TGGCTTCTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGTTGGCCCTCAGCAGCTaGTCTTCTGGGGGACTGCCC +
Preference number: 5 (lower is better)
Translates to: WLLDACSLDACILTPPSLLALSS*SSGGLP
Trigger: GGGCAGTCCCCCAGAAGACAAGCTGCTGAGGGCCAA...CAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAGAAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACCCCGCTCTTCCTaGTCGCTGTCCTTCCCGTGG +
Preference number: 5 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLSPRSS*SLSFPW
Trigger: CCACGGGAAGGACAGCGACAAGGAAGAGCGGGGTGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAGACGGCGTTGTaGCCGCTGTGGGTGGACTCA +
Preference number: 5 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLSETAL*PLWVDS
Trigger: TGAGTCCACCCACAGCGGCAACAACGCCGTCTCAGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGTTCTCTGAGACGGCGTaGTTGCCGCTGTGGGTGGAC +
Preference number: 5 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLFSETA*LPLWVD
Trigger: GTCCACCCACAGCGGCAACAACGCCGTCTCAGAGAA...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGTGGTTGCTGGCATaGGGAGCCAGCTCAGCCTCG +
Preference number: 5 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSMWLLA*GASSAS
Trigger: CGAGGCTGAGCTGGCTCCCAATGCCAGCAACCACAT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGGTCCAGGCTCTGGTaGCTCGACGCGTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLRSRLW*LDASSS
Trigger: GGAAGAGGACGCGTCGAGCAACCAGAGCCTGGACCT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS TCA 90 bp GCAGGGACAGGTGCTTTATGCTGTCCTTGGTCGCGGGGAGAACTGTaGGAGAACCGCCTAGGGAAGCAGCTTCGAAAGGTGACAGGCTCA +
Preference number: 5 (lower is better)
Translates to: AGTGALCCPWSRGEL*ENRLGKQLRKVTGS
Trigger: TGAGCCTGTCACCTTTCGAAGCTGCTTCCCTAGGCGGTTCTCTCACAGTTCTCCCCGCGACCAAGGACAGCATAAAGCACCTGTCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS TCA 90 bp AACTTTGGCCGAGTTTCACCCTCAGCAGTGGCTGTGCCAACAGGGTaGCCATCCAGCTGCCGCCCTTGGGCCTTCTTCACACACAAGACA +
Preference number: 5 (lower is better)
Translates to: NFGRVSPSAVAVPTG*PSSCRPWAFFTHKT
Trigger: TGTCTTGTGTGTGAAGAAGGCCCAAGGGCGGCAGCTGGATGGTCACCCTGTTGGCACAGCCACTGCTGAGGGTGAAACTCGGCCAAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 90 bp TCAGGCTGGATGATGAAGCCCTTCTGGAAGGGCTGCAGGGACAGGTaGTTTATGCTGTCCTTGGTCGCGGGGAGAACTGTGAGAGAACCG +
Preference number: 5 (lower is better)
Translates to: SGWMMKPFWKGCRDR*FMLSLVAGRTVREP
Trigger: CGGTTCTCTCACAGTTCTCCCCGCGACCAAGGACAGCATAAAGCACCTGTCCCTGCAGCCCTTCCAGAAGGGCTTCATCATCCAGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 90 bp GGTCCAGCTCAGTTCAAACACTTCGGAGTGCCTATGATGGACCAGTaGTGTGCCAGGGGTATCCAACACGTGGGCTGTCCCTGTTTGGGC +
Preference number: 5 (lower is better)
Translates to: GPAQFKHFGVPMMDQ*CARGIQHVGCPCLG
Trigger: GCCCAAACAGGGACAGCCCACGTGTTGGATACCCCTGGCACAGCACTGGTCCATCATAGGCACTCCGAAGTGTTTGAACTGAGCTGGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 90 bp GGCTTGACCACAATGCTGCTGTCAGGCTGGATGATGAAGCCCTTCTaGAAGGGCTGCAGGGACAGGTGCTTTATGCTGTCCTTGGTCGCG +
Preference number: 5 (lower is better)
Translates to: GLTTMLLSGWMMKPF*KGCRDRCFMLSLVA
Trigger: CGCGACCAAGGACAGCATAAAGCACCTGTCCCTGCAGCCCTTCCAGAAGGGCTTCATCATCCAGCCTGACAGCAGCATTGTGGTCAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CCA 90 bp TTGTCGCTGTCCTTCCCGTGGTGTTTGGCATGCCTGGCTTTCTGGTaGATCCGCTGGTGGCGAACCAGGCTGTGCTTCAAGGTGAAGGTT +
Preference number: 5 (lower is better)
Translates to: LSLSFPWCLACLAFW*IRWWRTRLCFKVKV
Trigger: AACCTTCACCTTGAAGCACAGCCTGGTTCGCCACCAGCGGATCCACCAGAAAGCCAGGCATGCCAAACACCACGGGAAGGACAGCGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 90 bp ACTAAGATACAGGAAGGGGGTGGTCTCAGCTGCCCTCACTACTCATaGAGCCGAGGTTCCTGTCAGAGCCCCCTTGGGCTCCCTATGTAC +
Preference number: 5 (lower is better)
Translates to: TKIQEGGGLSCPHYS*SRGSCQSPLGLPMY
Trigger: GTACATAGGGAGCCCAAGGGGGCTCTGACAGGAACCTCGGCTCCATGAGTAGTGAGGGCAGCTGAGACCACCCCCTTCCTGTATCTTAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 90 bp TGCCCCGCTCTGACTGTTCAACCAAACCAGCGTGGCGTGAAGCACTaGGCAGAGTCTGAGGGACTTCACAAAGGGTGTGTAGTGGCTACC +
Preference number: 5 (lower is better)
Translates to: CPALTVQPNQRGVKH*AESEGLHKGCVVAT
Trigger: GGTAGCCACTACACACCCTTTGTGAAGTCCCTCAGACTCTGCCCAGTGCTTCACGCCACGCTGGTTTGGTTGAACAGTCAGAGCGGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS-3UTR CAA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGGCCGACATCATGGTGTaGATGGAAGATAGGTCTGAA +
Preference number: 5 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVADIMV*MEDRSE
Trigger: TTCAGACCTATCTTCCATCAACACCATGATGTCGGC...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCAGACAAAACGGTGTaGCTCGCTGATGCACCTCCG +
Preference number: 5 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLADKTV*LADAPP
Trigger: CGGAGGTGCATCAGCGAGCAACACCGTTTTGTCTGC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTAGCATGGGGAACGCCTaGTCACAGGTGTCGCAGACA +
Preference number: 5 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSSMGNA*SQVSQT
Trigger: TGTCTGCGACACCTGTGACAAGGCGTTCCCCATGCT...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGCATGGGGAACGCCTaGTCACAGGTGTCGCAGACA +
Preference number: 5 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSSMGNA*SQVSQT
Trigger: TGTCTGCGACACCTGTGACAAGGCGTTCCCCATGCT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGCCTGCGGCTTTTCTaGACCCTGGTCTGCCGCCAC +
Preference number: 5 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSGLRLF*TLVCRH
Trigger: GTGGCGGCAGACCAGGGTCAAGAAAAGCCGCAGGCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCAGGCCTGACGTCTTaGGTGTGCTGCAGGCCAAGC +
Preference number: 5 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSAGLTS*VCCRPS
Trigger: GCTTGGCCTGCAGCACACCAAAGACGTCAGGCCTGC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp CCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACAGAGGGGGCATGTGCTaGAAGATCGCCTGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: PGPCLGRLLTAPSKFCSDRGGMC*KIACSG
Trigger: CCCACTGCAGGCGATCTTCAAGCACATGCCCCCTCT...GTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCCTTGAGGTGCTTCTaGCGCAGGTGCCGCTCGCAG +
Preference number: 5 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSALRCF*RRCRSQ
Trigger: CTGCGAGCGGCACCTGCGCAAGAAGCACCTCAAGGC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp CTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATTGCACTCGAAGGGCTaGCGGCCCTTGTGGCCCCCG +
Preference number: 5 (lower is better)
Translates to: LTSNVPGHWVTALLSPKSLHSKG*RPLWPP
Trigger: CGGGGGCCACAAGGGCCGCAAGCCCTTCGAGTGCAA...TGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACGTGCAGGTGCTGCTaGAGGATGTGGTGGATGCAG +
Preference number: 5 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSTCRCC*RMWWMQ
Trigger: CTGCATCCACCACATCCTCAAGCAGCACCTGCACGT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp CACAGCTGGGTAAGGCTTGGATTAGGCTTAGCAGGAAGACTGGGAATACCTCGCTCCTCCTCAGGCTTCTaGGCTTCGCTGGGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: HSWVRLGLGLAGRLGIPRSSSGF*ASLGVA
Trigger: GGCCACTCCCAGCGAAGCCAAGAAGCCTGAGGAGGA...GCGAGGTATTCCCAGTCTTCCTGCTAAGCCTAATCCAAGCCTTACCCAGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AAGACTGGGAATACCTCGCTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTGCGGTGGTGGCGGCTTaGGGGACAGAACCTCCTAAG +
Preference number: 5 (lower is better)
Translates to: KTGNTSLTSNVPGHWVTAAVVAA*GTEPPK
Trigger: CTTAGGAGGTTCTGTCCCCAAAGCCGCCACCACCGC...AGCAGTGACCCAGTGACCAGGCACATTACTCGTGAGCGAGGTATTCCCAGTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTGTGTACGAGTTCCGCTaGGCCCTCAGCAGCTTGTCT +
Preference number: 5 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSVYEFR*ALSSLS
Trigger: AGACAAGCTGCTGAGGGCCAAGCGGAACTCGTACAC...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTTCCTTCCCGTGGTGTTaGGCATGCCTGGCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSSFPWC*ACLAFW
Trigger: CCAGAAAGCCAGGCATGCCAAACACCACGGGAAGGA...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGAGACGGCGTTGTaGCCGCTGTGGGTGGACTCA +
Preference number: 5 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLSETAL*PLWVDS
Trigger: TGAGTCCACCCACAGCGGCAACAACGCCGTCTCAGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCTGAGACGGCGTaGTTGCCGCTGTGGGTGGAC +
Preference number: 5 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLFSETA*LPLWVD
Trigger: GTCCACCCACAGCGGCAACAACGCCGTCTCAGAGAA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTAGGGTGGGCAGGCCTCTaGCTGCGCGGCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLGWAGL*LRGSSR
Trigger: CCTGCTGGAGCCGCGCAGCAAGAGGCCTGCCCACCC...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACAGGTCCAGGCTCTGGTaGCTCGACGCGTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDRSRLW*LDASSS
Trigger: GGAAGAGGACGCGTCGAGCAACCAGAGCCTGGACCT...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCCCTCCGCCAGCTaGAAGTCCATGAGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLSPSAS*KSMSLV
Trigger: CACCAAGCTCATGGACTTCAAGCTGGCGGAGGGCGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCCTCTTGTCTGCCTaGCTGGCCACGCTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSFLLSA*LATLLG
Trigger: CCCCAAAAGCGTGGCCAGCAAGGCAGACAAGAGGAA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp CTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGCTGCCAGACCTTCTTCCTCTaGTCTGCCTTGCTGGCCACG +
Preference number: 5 (lower is better)
Translates to: LDACSLDACILTPPSLSCQTFFL*SALLAT
Trigger: CGTGGCCAGCAAGGCAGACAAGAGGAAGAAGGTCTG...GCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGACCTTCTTCCTCTaGTCTGCCTTGCTGGCCACG +
Preference number: 5 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSQTFFL*SALLAT
Trigger: CGTGGCCAGCAAGGCAGACAAGAGGAAGAAGGTCTG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGCGACCAGAACCGCTaGTTGCACACGCTGCAGACC +
Preference number: 5 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLSDQNR*LHTLQT
Trigger: GGTCTGCAGCGTGTGCAACAAGCGGTTCTGGTCGCT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS TCA 90 bp GGAACGCCTTGTCACAGGTGTCGCAGACAAAACGGTGTTGCTCGCTaGTGCACCTCCGCAGGTTTGTTTCGCACCAGGCCTGAGAAATGC +
Preference number: 5 (lower is better)
Translates to: GTPCHRCRRQNGVAR*CTSAGLFRTRPEKC
Trigger: GCATTTCTCAGGCCTGGTGCGAAACAAACCTGCGGAGGTGCATCAGCGAGCAACACCGTTTTGTCTGCGACACCTGTGACAAGGCGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS TCA 90 bp CTTTCTGGTGGATCCGCTGGTGGCGAACCAGGCTGTGCTTCAAGGTaGAGGTTCGCTCGCAGGTCTGACATTTGTATGGCCTTTCCCCTG +
Preference number: 5 (lower is better)
Translates to: LSGGSAGGEPGCASR*RFARRSDICMAFPL
Trigger: CAGGGGAAAGGCCATACAAATGTCAGACCTGCGAGCGAACCTTCACCTTGAAGCACAGCCTGGTTCGCCACCAGCGGATCCACCAGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS TCA 90 bp ACATCCTCACACAAAGGATGTCCTCTGTGTAGCCGCCTGCTCTCTTaGACACTCCGTCCCTCACCTCCGATTCCAAACGCCAGCTCGCCA +
Preference number: 5 (lower is better)
Translates to: TSSHKGCPLCSRLLS*TLRPSPPIPNASSP
Trigger: TGGCGAGCTGGCGTTTGGAATCGGAGGTGAGGGACGGAGTGTTCAAGAGAGCAGGCGGCTACACAGAGGACATCCTTTGTGTGAGGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS TCA 90 bp GACTGTTCAACCAAACCAGCGTGGCGTGAAGCACTGGGCAGAGTCTaGGGGACTTCACAAAGGGTGTGTAGTGGCTACCGAAGCTGGGTG +
Preference number: 5 (lower is better)
Translates to: DCSTKPAWREALGRV*GTSQRVCSGYRSWV
Trigger: CACCCAGCTTCGGTAGCCACTACACACCCTTTGTGAAGTCCCTCAGACTCTGCCCAGTGCTTCACGCCACGCTGGTTTGGTTGAACAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 90 bp ACAATGCTGCTGTCAGGCTGGATGATGAAGCCCTTCTGGAAGGGCTaGAGGGACAGGTGCTTTATGCTGTCCTTGGTCGCGGGGAGAACT +
Preference number: 5 (lower is better)
Translates to: TMLLSGWMMKPFWKG*RDRCFMLSLVAGRT
Trigger: AGTTCTCCCCGCGACCAAGGACAGCATAAAGCACCTGTCCCTGCAGCCCTTCCAGAAGGGCTTCATCATCCAGCCTGACAGCAGCATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 90 bp CCCAAGCTGTCTTCTAAAACCCAAAGCTGCACGCGTGTATGGCCCTaGTGTGTGCTCGTGACCCTGCAGCTGTGTGTGACTTCCAGGATG +
Preference number: 5 (lower is better)
Translates to: PKLSSKTQSCTRVWP*CVLVTLQLCVTSRM
Trigger: CATCCTGGAAGTCACACACAGCTGCAGGGTCACGAGCACACAGCAGGGCCATACACGCGTGCAGCTTTGGGTTTTAGAAGACAGCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 90 bp CTCGTCCCTCACCCAGGTCAGCATTTCAGAAGGAGACACCTGATCTaGCTCTATCGCTGCCACACACCATGCTATGCAGGCTTGGACTGC +
Preference number: 5 (lower is better)
Translates to: LVPHPGQHFRRRHLI*LYRCHTPCYAGLDC
Trigger: GCAGTCCAAGCCTGCATAGCATGGTGTGTGGCAGCGATAGAGGCAGATCAGGTGTCTCCTTCTGAAATGCTGACCTGGGTGAGGGACGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 90 bp CTAGCAACAATTATAGATAGAGGCACAGGGCAGGGGTGGCCTGTGTaGCCCCACAAAGGATGCCTGGCAACTCTCTTCTTACGGGCCACC +
Preference number: 5 (lower is better)
Translates to: LATIIDRGTGQGWPV*PHKGCLATLFLRAT
Trigger: GGTGGCCCGTAAGAAGAGAGTTGCCAGGCATCCTTTGTGGGGGCACACAGGCCACCCCTGCCCTGTGCCTCTATCTATAATTGTTGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 90 bp GCCCAGCAACATCCTCACACAAAGGATGTCCTCTGTGTAGCCGCCTaGTCTCTTGAACACTCCGTCCCTCACCTCCGATTCCAAACGCCA +
Preference number: 5 (lower is better)
Translates to: AQQHPHTKDVLCVAA*SLEHSVPHLRFQTP
Trigger: TGGCGTTTGGAATCGGAGGTGAGGGACGGAGTGTTCAAGAGAGCAGGCGGCTACACAGAGGACATCCTTTGTGTGAGGATGTTGCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 90 bp TGGACGCTGGCTCAGCTGGGAGCATTTCCTAATGCTGACACTCCCTaGTCCCTGCAACCCTCATCAGAAGAACCTGCGAAATACCTGCCG +
Preference number: 5 (lower is better)
Translates to: WTLAQLGAFPNADTP*SLQPSSEEPAKYLP
Trigger: CGGCAGGTATTTCGCAGGTTCTTCTGATGAGGGTTGCAGGGAGCAGGGAGTGTCAGCATTAGGAAATGCTCCCAGCTGAGCCAGCGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS-3UTR CAA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGCCAGCGGGCGAACTaGACGTCATTGGGACAGGGG +
Preference number: 5 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSSQRAN*TSLGQG
Trigger: CCCCTGTCCCAATGACGTCAAGTTCGCCCGCTGGCT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGTTCTGCCAATCCGATTaGGTCCTGGAGGCTTCGAGG +
Preference number: 5 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLFCQSD*VLEASR
Trigger: CCTCGAAGCCTCCAGGACCAAATCGGATTGGCAGAA...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCCTCCAGTGTCTGTGTaGTGCTGGCGAATGTGCATG +
Preference number: 5 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSPPVSV*CWRMCM
Trigger: CATGCACATTCGCCAGCACAACACAGACACTGGAGG...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACTGCACCTCCGCAGGTTaGTTTCGCACCAGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDCTSAG*FRTRPE
Trigger: CTCAGGCCTGGTGCGAAACAAACCTGCGGAGGTGCA...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGCATGGGGAACGCCTaGTCACAGGTGTCGCAGACA +
Preference number: 5 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLSMGNA*SQVSQT
Trigger: TGTCTGCGACACCTGTGACAAGGCGTTCCCCATGCT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp CTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGCTGCGTGTCTGGAGCTGAATaGCCTGGTTGTCATCCGGCA +
Preference number: 5 (lower is better)
Translates to: LDACSLDACILTPPSLSCVSGAE*PGCHPA
Trigger: TGCCGGATGACAACCAGGCAATTCAGCTCCAGACAC...GCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCCTCCACTGAGCCTTaGAGGAGCTTCAGGGGCGGT +
Preference number: 5 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSASTEP*RSFRGG
Trigger: ACCGCCCCTGAAGCTCCTCAAAGGCTCAGTGGAGGC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp CTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGCTGCGCTGTCATGAAGGCCTaGAGTTCCCCCTCTGTGATC +
Preference number: 5 (lower is better)
Translates to: LDACSLDACILTPPSLSCAVMKA*SSPSVI
Trigger: GATCACAGAGGGGGAACTCAAGGCCTTCATGACAGC...GCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTTTCTTCTCGATATCCTaGCGGGTGGCCTTGAGGTGC +
Preference number: 5 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSFFSIS*RVALRC
Trigger: GCACCTCAAGGCCACCCGCAAGGATATCGAGAAGAA...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTCTCGATATCCTaGCGGGTGGCCTTGAGGTGC +
Preference number: 5 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLFFSIS*RVALRC
Trigger: GCACCTCAAGGCCACCCGCAAGGATATCGAGAAGAA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGTTGCACTCGAAGGGCTaGCGGCCCTTGTGGCCCCCG +
Preference number: 5 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWLHSKG*RPLWPP
Trigger: CGGGGGCCACAAGGGCCGCAAGCCCTTCGAGTGCAA...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGGCGGCGCTGCACTCCTaGCACTCGAAGGGCTTGCGG +
Preference number: 5 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWAALHS*HSKGLR
Trigger: CCGCAAGCCCTTCGAGTGCAAGGAGTGCAGCGCCGC...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAGGCAGTGAGGGGCTaGCAGTCACCAAGGGCAGCG +
Preference number: 5 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSKAVRG*QSPRAA
Trigger: CGCTGCCCTTGGTGACTGCAAGCCCCTCACTGCCTT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGCGGGCTCCAACTaGATCGAGACATGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSLAGSN*IETWGG
Trigger: ACCTCCCCATGTCTCGATCAAGTTGGAGCCCGCCAG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGGCTGAGGAGTAGATaGGGACCGCCAGCTGAACAG +
Preference number: 5 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSGLRSR*GPPAEQ
Trigger: CTGTTCAGCTGGCGGTCCCAATCTACTCCTCAGCCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCTCCACCCCGCCGCTGTaGGCGCGGGGTCGGCTCCTC +
Preference number: 5 (lower is better)
Translates to: NLPWFWPETILETFINHISTPPL*ARGRLL
Trigger: GAGGAGCCGACCCCGCGCCAACAGCGGCGGGGTGGA...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTAACGGACTGAACTTGTaGGTGTCTGTGGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSNGLNL*VSVVAS
Trigger: GCTGGCCACCACAGACACCAACAAGTTCAGTCCGTT...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGTCCTTCCCGTGGTGTTaGGCATGCCTGGCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: CLITVEELPPEGANHNRRSFPWC*ACLAFW
Trigger: CCAGAAAGCCAGGCATGCCAAACACCACGGGAAGGA...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACATGTGGTTGCTGGCATaGGGAGCCAGCTCAGCCTCG +
Preference number: 5 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDMWLLA*GASSAS
Trigger: CGAGGCTGAGCTGGCTCCCAATGCCAGCAACCACAT...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp ATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTCAGCTGTGGCCAGGATaGGGTGGGCAGGCCTCTTGC +
Preference number: 5 (lower is better)
Translates to: MCLVTGSLLCFLQSHLCSQLWPG*GGQASC
Trigger: GCAAGAGGCCTGCCCACCCAATCCTGGCCACAGCTG...ACTGCAGAGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGAAGTCCATGAGCTaGGTGGCGAAGTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLLKSMS*VAKSRS
Trigger: GGACCTGGACTTCGCCACCAAGCTCATGGACTTCAA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCCTCTTGTCTGCCTaGCTGGCCACGCTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLFLLSA*LATLLG
Trigger: CCCCAAAAGCGTGGCCAGCAAGGCAGACAAGAGGAA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGACCAGAACCGCTTGTaGCACACGCTGCAGACCTTC +
Preference number: 5 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLDQNRL*HTLQTF
Trigger: GAAGGTCTGCAGCGTGTGCAACAAGCGGTTCTGGTC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCCACTGGGTCACTGCTTaGCTTTCTCCAAAGTCATCT +
Preference number: 5 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGHWVTA*LSPKSS
Trigger: AGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGTG...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS TCA 90 bp CCACCTCATCCTGAGTGTTGTCCTCCGCTGTCTGCAGAAACGGACTaGACTTGTTGGTGTCTGTGGTGGCCAGCATCTTCTCGATGCTGG +
Preference number: 5 (lower is better)
Translates to: PPHPECCPPLSAETD*TCWCLWWPASSRCW
Trigger: CCAGCATCGAGAAGATGCTGGCCACCACAGACACCAACAAGTTCAGTCCGTTTCTGCAGACAGCGGAGGACAACACTCAGGATGAGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS TCA 90 bp CTGTGCTATCAGGTCCAGCTCAGTTCAAACACTTCGGAGTGCCTATaGTGGACCAGTGCTGTGCCAGGGGTATCCAACACGTGGGCTGTC +
Preference number: 5 (lower is better)
Translates to: LCYQVQLSSNTSECL*WTSAVPGVSNTWAV
Trigger: GACAGCCCACGTGTTGGATACCCCTGGCACAGCACTGGTCCATCATAGGCACTCCGAAGTGTTTGAACTGAGCTGGACCTGATAGCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS TCA 90 bp AAATTCCAAGGACGTGCGTGGCCCAGATTCTCTTGCTGGCCGGGCTaGCCTGGATGCTTCTCCCAGCTGACTTCATTCACAGCAGGGTAT +
Preference number: 5 (lower is better)
Translates to: KFQGRAWPRFSCWPG*PGCFSQLTSFTAGY
Trigger: ATACCCTGCTGTGAATGAAGTCAGCTGGGAGAAGCATCCAGGTCAGCCCGGCCAGCAAGAGAATCTGGGCCACGCACGTCCTTGGAATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 90 bp AGCTCAGTTCAAACACTTCGGAGTGCCTATGATGGACCAGTGCTGTaGCAGGGGTATCCAACACGTGGGCTGTCCCTGTTTGGGCCACAT +
Preference number: 5 (lower is better)
Translates to: SSVQTLRSAYDGPVL*QGYPTRGLSLFGPH
Trigger: ATGTGGCCCAAACAGGGACAGCCCACGTGTTGGATACCCCTGGCACAGCACTGGTCCATCATAGGCACTCCGAAGTGTTTGAACTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 90 bp CTCGTTGACACTGTTTTCTTTGTGTTATCAAGCTGCCCTCCTTATTaGGGGGCTGAACCTGGCTGGGCCCAAACGTGGGCAGGGTCACAC +
Preference number: 5 (lower is better)
Translates to: LVDTVFFVLSSCPPY*GAEPGWAQTWAGSH
Trigger: GTGTGACCCTGCCCACGTTTGGGCCCAGCCAGGTTCAGCCCCCCAATAAGGAGGGCAGCTTGATAACACAAAGAAAACAGTGTCAACGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000467782.5
ENST00000471433.5
ENST00000475946.5
ENST00000483150.1
ENST00000491191.5
CDS CCA 90 bp CCTTATGTGACCCACACATCCTTAATGCCTGGACGCTGGCTCAGCTaGGAGCATTTCCTAATGCTGACACTCCCTGCTCCCTGCAACCCT +
Preference number: 5 (lower is better)
Translates to: PYVTHTSLMPGRWLS*EHFLMLTLPAPCNP
Trigger: AGGGTTGCAGGGAGCAGGGAGTGTCAGCATTAGGAAATGCTCCCAGCTGAGCCAGCGTCCAGGCATTAAGGATGTGTGGGTCACATAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 90 bp TGCAGATGCCCTGGCTCCTTATGTGACCCACACATCCTTAATGCCTaGACGCTGGCTCAGCTGGGAGCATTTCCTAATGCTGACACTCCC +
Preference number: 5 (lower is better)
Translates to: CRCPGSLCDPHILNA*TLAQLGAFPNADTP
Trigger: GGGAGTGTCAGCATTAGGAAATGCTCCCAGCTGAGCCAGCGTCCAGGCATTAAGGATGTGTGGGTCACATAAGGAGCCAGGGCATCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS-3UTR CAA 90 bp ACCCGAGGGTGCCAACCACAACCGCAGGCACACGTTAACACGGGGACCTGGGTGTTGACACTGTTTTCTTaGTGTTATCAAGCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: TRGCQPQPQAHVNTGTWVLTLFS*CYQAAL
Trigger: GAGGGCAGCTTGATAACACAAAGAAAACAGTGTCAA...CACCCAGGTCCCCGTGTTAACGTGTGCCTGCGGTTGTGGTTGGCACCCTCGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp TCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTGCGAACTTGACGTCATaGGGACAGGGGTTTAAGCTT +
Preference number: 5 (lower is better)
Translates to: SGAVGYILLPAGGDSEGSANLTS*GQGFKL
Trigger: AAGCTTAAACCCCTGTCCCAATGACGTCAAGTTCGC...ACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGAGCCAGCGGGCGAACTaGACGTCATTGGGACAGGGG +
Preference number: 5 (lower is better)
Translates to: GNPMKYRRFALLAFVCAESQRAN*TSLGQG
Trigger: CCCCTGTCCCAATGACGTCAAGTTCGCCCGCTGGCT...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCCAGTGTCTGTGTaGTGCTGGCGAATGTGCATG +
Preference number: 5 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLPPVSV*CWRMCM
Trigger: CATGCACATTCGCCAGCACAACACAGACACTGGAGG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCCAGTGTCTGTGTaGTGCTGGCGAATGTGCATG +
Preference number: 5 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLPPVSV*CWRMCM
Trigger: CATGCACATTCGCCAGCACAACACAGACACTGGAGG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCATCCCTGGGAAGTaGTTTGTGGACAAGCGCGTT +
Preference number: 5 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLCIPGK*FVDKRV
Trigger: AACGCGCTTGTCCACAAACAACTTCCCAGGGATGCA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGCACCTCCGCAGGTTaGTTTCGCACCAGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSCTSAG*FRTRPE
Trigger: CTCAGGCCTGGTGCGAAACAAACCTGCGGAGGTGCA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACGCAGACAAAACGGTGTaGCTCGCTGATGCACCTCCG +
Preference number: 5 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDADKTV*LADAPP
Trigger: CGGAGGTGCATCAGCGAGCAACACCGTTTTGTCTGC...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTGTCTGGAGCTGAATaGCCTGGTTGTCATCCGGCA +
Preference number: 5 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLVSGAE*PGCHPA
Trigger: TGCCGGATGACAACCAGGCAATTCAGCTCCAGACAC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCTTTATGCTGTCCTaGGTCGCGGGGAGAACTGTG +
Preference number: 5 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLCFMLS*VAGRTV
Trigger: CACAGTTCTCCCCGCGACCAAGGACAGCATAAAGCA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCTCCTGCTTGATCTaGGCCTCCATGCTCAGCGGC +
Preference number: 5 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSISCLI*ASMLSG
Trigger: GCCGCTGAGCATGGAGGCCAAGATCAAGCAGGAGAT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp CCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACGCTGTCATGAAGGCCTaGAGTTCCCCCTCTGTGATC +
Preference number: 5 (lower is better)
Translates to: PGPCLGRLLTAPSKFCSDAVMKA*SSPSVI
Trigger: GATCACAGAGGGGGAACTCAAGGCCTTCATGACAGC...GTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGTCCTTGCGGGTGGCCTaGAGGTGCTTCTTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: GNPMKYRRFALLAFVCAESLRVA*RCFLRR
Trigger: CCTGCGCAAGAAGCACCTCAAGGCCACCCGCAAGGA...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTTCTCGATATCCTaGCGGGTGGCCTTGAGGTGC +
Preference number: 5 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLFFSIS*RVALRC
Trigger: GCACCTCAAGGCCACCCGCAAGGATATCGAGAAGAA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp TGGCTTCTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGTTCTTCTCGATATCCTaGCGGGTGGCCTTGAGGTGC +
Preference number: 5 (lower is better)
Translates to: WLLDACSLDACILTPPSLFFSIS*RVALRC
Trigger: GCACCTCAAGGCCACCCGCAAGGATATCGAGAAGAA...CAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAGAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGCGGGCTCCAACTaGATCGAGACATGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSLAGSN*IETWGG
Trigger: ACCTCCCCATGTCTCGATCAAGTTGGAGCCCGCCAG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTTCCTGAAGTTCTaGGGGATGGACAGGTCGATG +
Preference number: 5 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSPFLKF*GMDRSM
Trigger: CATCGACCTGTCCATCCCCAAGAACTTCAGGAAAGG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCGGAGTGGCCAAATCCTaGTCCCCTTTCCTGAAGTTC +
Preference number: 5 (lower is better)
Translates to: ALLSPKSSLQCSRHGPGFGVAKS*SPFLKF
Trigger: GAACTTCAGGAAAGGGGACAAGGATTTGGCCACTCC...GAAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGAGTGGCCAAATCCTaGTCCCCTTTCCTGAAGTTC +
Preference number: 5 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSGVAKS*SPFLKF
Trigger: GAACTTCAGGAAAGGGGACAAGGATTTGGCCACTCC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGAAACGGACTGAACTaGTTGGTGTCTGTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLRNGLN*LVSVVA
Trigger: GGCCACCACAGACACCAACAAGTTCAGTCCGTTTCT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp CTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGAGCTGCAGAAACGGACTGAACTaGTTGGTGTCTGTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: LDACSLDACILTPPSLSCRNGLN*LVSVVA
Trigger: GGCCACCACAGACACCAACAAGTTCAGTCCGTTTCT...GCAGCTCAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGTTGGCCCTCAGCAGCTaGTCTTCTGGGGGACTGCCC +
Preference number: 5 (lower is better)
Translates to: GNPMKYRRFALLAFVCAELALSS*SSGGLP
Trigger: GGGCAGTCCCCCAGAAGACAAGCTGCTGAGGGCCAA...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp CACAGCTGGGTAAGGCTTGGATTAGGCTTAGCAGGAAGACTGGGAATACCTCGCGTGTACGAGTTCCGCTaGGCCCTCAGCAGCTTGTCT +
Preference number: 5 (lower is better)
Translates to: HSWVRLGLGLAGRLGIPRVYEFR*ALSSLS
Trigger: AGACAAGCTGCTGAGGGCCAAGCGGAACTCGTACAC...GCGAGGTATTCCCAGTCTTCCTGCTAAGCCTAATCCAAGCCTTACCCAGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTACGAGTTCCGCTaGGCCCTCAGCAGCTTGTCT +
Preference number: 5 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSVYEFR*ALSSLS
Trigger: AGACAAGCTGCTGAGGGCCAAGCGGAACTCGTACAC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCTTCTGCAGGCAGTaGGTGTACGAGTTCCGCTTG +
Preference number: 5 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSIFCRQ*VYEFRL
Trigger: CAAGCGGAACTCGTACACCAACTGCCTGCAGAAGAT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTGGTAACTCCGTGTTaGCGCAACTGGTGGCGTTCA +
Preference number: 5 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLVVTPC*RNWWRS
Trigger: TGAACGCCACCAGTTGCGCAAACACGGAGTTACCAC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334984.10
ENST00000379938.7
CDS-3UTR CAA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACTCCTTCCCGTGGTGTTaGGCATGCCTGGCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDSFPWC*ACLAFW
Trigger: CCAGAAAGCCAGGCATGCCAAACACCACGGGAAGGA...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp ATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTTCACCCCGCTCTTCCTaGTCGCTGTCCTTCCCGTGG +
Preference number: 5 (lower is better)
Translates to: MCLVTGSLLCFLQSHLCSSPRSS*SLSFPW
Trigger: CCACGGGAAGGACAGCGACAAGGAAGAGCGGGGTGA...ACTGCAGAGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTGAGACGGCGTaGTTGCCGCTGTGGGTGGAC +
Preference number: 5 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSFSETA*LPLWVD
Trigger: GTCCACCCACAGCGGCAACAACGCCGTCTCAGAGAA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCGGGTGGGCAGGCCTCTaGCTGCGCGGCTCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: NLPWFWPETILETFINHIGWAGL*LRGSSR
Trigger: CCTGCTGGAGCCGCGCAGCAAGAGGCCTGCCCACCC...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GGACCAGGAGCTCAGGTGCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAATTTTCTTCCAGTTATaGGCTATGGGTACCCAAGGG +
Preference number: 5 (lower is better)
Translates to: GPGAQVQWGTFSSLQAETIFFQL*AMGTQG
Trigger: CCCTTGGGTACCCATAGCCAATAACTGGAAGAAAAT...TGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGCACCTGAGCTCCTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GAAGGCAAGAGGCTCCATACACTGCAGCAAGCACAGGGGTCCCCAGCAGCAGGCTGGCCTGAAACCATATaGGAAACCTTCATCAACCAC +
Preference number: 5 (lower is better)
Translates to: EGKRLHTLQQAQGSPAAGWPETI*ETFINH
Trigger: GTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCA...GCCTGCTGCTGGGGACCCCTGTGCTTGCTGCAGTGTATGGAGCCTCTTGCCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp CCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACTTGAAGTCCATGAGCTaGGTGGCGAAGTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: PGPCLGRLLTAPSKFCSDLKSMS*VAKSRS
Trigger: GGACCTGGACTTCGCCACCAAGCTCATGGACTTCAA...GTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp CCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACTTGCTGGCCACGCTTTaGGGGGAGTCTGTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: PGPCLGRLLTAPSKFCSDLLATL*GESVFG
Trigger: ACCAAAGACAGACTCCCCCAAAAGCGTGGCCAGCAA...GTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCCTCTTGTCTGCCTaGCTGGCCACGCTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: SHAPACLSLSLSLSLSLSFLLSA*LATLLG
Trigger: CCCCAAAAGCGTGGCCAGCAAGGCAGACAAGAGGAA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGAATAACCCTGCCTTTTaGCATCCAGGGGTGTGGGCT +
Preference number: 5 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLNNPAF*HPGVWA
Trigger: AGCCCACACCCCTGGATGCAAAAAGGCAGGGTTATT...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS TCA 90 bp GTGAGCAGGAGCTGGGGTCCCCTGTGCTGTTTCTGCCTCTGCTCATaGTTCTCTTTGGGAGGTTCAGCTGGTAATGTCATCTCTGCTCAC +
Preference number: 5 (lower is better)
Translates to: VSRSWGPLCCFCLCS*FSLGGSAGNVISAH
Trigger: GTGAGCAGAGATGACATTACCAGCTGAACCTCCCAAAGAGAATCATGAGCAGAGGCAGAAACAGCACAGGGGACCCCAGCTCCTGCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS TCA 90 bp CCAGATTCTCTTGCTGGCCGGGCTGACCTGGATGCTTCTCCCAGCTaGCTTCATTCACAGCAGGGTATGGCCAGTTGCTCAGTTCTATTC +
Preference number: 5 (lower is better)
Translates to: PDSLAGRADLDASPS*LHSQQGMASCSVLF
Trigger: GAATAGAACTGAGCAACTGGCCATACCCTGCTGTGAATGAAGTCAGCTGGGAGAAGCATCCAGGTCAGCCCGGCCAGCAAGAGAATCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 90 bp CCAGAACCGCTTGTTGCACACGCTGCAGACCTTCTTCCTCTTGTCTaGCTTGCTGGCCACGCTTTTGGGGGAGTCTGTCTTTGGTTTCTT +
Preference number: 5 (lower is better)
Translates to: PEPLVAHAADLLPLV*LAGHAFGGVCLWFL
Trigger: AAGAAACCAAAGACAGACTCCCCCAAAAGCGTGGCCAGCAAGGCAGACAAGAGGAAGAAGGTCTGCAGCGTGTGCAACAAGCGGTTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 90 bp TTCCACTCTGCCAGGCTGTGCGTTCAGAGGACAGCTATTTGCAGATaGCCTGGCTCCTTATGTGACCCACACATCCTTAATGCCTGGACG +
Preference number: 5 (lower is better)
Translates to: FHSARLCVQRTAICR*PGSLCDPHILNAWT
Trigger: CGTCCAGGCATTAAGGATGTGTGGGTCACATAAGGAGCCAGGGCATCTGCAAATAGCTGTCCTCTGAACGCACAGCCTGGCAGAGTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 90 bp CGCTGCAGACCTTCTTCCTCTTGTCTGCCTTGCTGGCCACGCTTTTaGGGGAGTCTGTCTTTGGTTTCTTGTCATCGTCGCTCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: RCRPSSSCLPCWPRF*GSLSLVSCHRRSSL
Trigger: CAGAGAAGAGCGACGATGACAAGAAACCAAAGACAGACTCCCCCAAAAGCGTGGCCAGCAAGGCAGACAAGAGGAAGAAGGTCTGCAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTGTGCATGTTCCCATaGGTGGTAAATGACTGGCCA +
Preference number: 5 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLLCMFP*VVNDWP
Trigger: TGGCCAGTCATTTACCACCAATGGGAACATGCACAG...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp CTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCAGCCACATGGGTCTGCTaGTGCAGAGCCAGTGAGCAG +
Preference number: 5 (lower is better)
Translates to: LTSNVPGHWVTALLSPKSATWVC*CRASEQ
Trigger: CTGCTCACTGGCTCTGCACAAGCAGACCCATGTGGC...TGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACGCTGTCATGAAGGCCTaGAGTTCCCCCTCTGTGATC +
Preference number: 5 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDAVMKA*SSPSVI
Trigger: GATCACAGAGGGGGAACTCAAGGCCTTCATGACAGC...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCAAGGGCTTGCGGCCCTaGTGGCCCCCGCCCAGGCCG +
Preference number: 5 (lower is better)
Translates to: YTEREEEAIKYILSVHVFKGLRP*WPPPRP
Trigger: CGGCCTGGGCGGGGGCCACAAGGGCCGCAAGCCCTT...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp TGGCTTCTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGCCTTTCCTGAAGTTCTaGGGGATGGACAGGTCGATG +
Preference number: 5 (lower is better)
Translates to: WLLDACSLDACILTPPSLPFLKF*GMDRSM
Trigger: CATCGACCTGTCCATCCCCAAGAACTTCAGGAAAGG...CAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAGAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGAGTGGCCAAATCCTaGTCCCCTTTCCTGAAGTTC +
Preference number: 5 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLGVAKS*SPFLKF
Trigger: GAACTTCAGGAAAGGGGACAAGGATTTGGCCACTCC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTATGTTACTGCCAGTGCTaGCGGGCCCTGGGTCCGCCA +
Preference number: 5 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLCYCQC*RALGPP
Trigger: TGGCGGACCCAGGGCCCGCAAGCACTGGCAGTAACA...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATCTTCTGCAGGCAGTaGGTGTACGAGTTCCGCTTG +
Preference number: 5 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLIFCRQ*VYEFRL
Trigger: CAAGCGGAACTCGTACACCAACTGCCTGCAGAAGAT...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGATCTTCTGCAGGCAGTaGGTGTACGAGTTCCGCTTG +
Preference number: 5 (lower is better)
Translates to: CLITVEELPPEGANHNRRIFCRQ*VYEFRL
Trigger: CAAGCGGAACTCGTACACCAACTGCCTGCAGAAGAT...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp ATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTTCTGAGACGGCGTTGTaGCCGCTGTGGGTGGACTCA +
Preference number: 5 (lower is better)
Translates to: MCLVTGSLLCFLQSHLCSSETAL*PLWVDS
Trigger: TGAGTCCACCCACAGCGGCAACAACGCCGTCTCAGA...ACTGCAGAGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACTTGCTGGCCACGCTTTaGGGGGAGTCTGTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDLLATL*GESVFG
Trigger: ACCAAAGACAGACTCCCCCAAAAGCGTGGCCAGCAA...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGACCAGAACCGCTTGTaGCACACGCTGCAGACCTTC +
Preference number: 5 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSDQNRL*HTLQTF
Trigger: GAAGGTCTGCAGCGTGTGCAACAAGCGGTTCTGGTC...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTGGCCGGGCAGGACGCTaGGCTCCCTGGCATGATGCG +
Preference number: 5 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTAGRAGR*APWHDA
Trigger: CGCATCATGCCAGGGAGCCAAGCGTCCTGCCCGGCC...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS GCA 90 bp TTCAGAAGGAGACACCTGATCTGCCTCTATCGCTGCCACACACCATaGTATGCAGGCTTGGACTGCTCAGAAATCTCTTGTGGGAGCCAC +
Preference number: 5 (lower is better)
Translates to: FRRRHLICLYRCHTP*YAGLDCSEISCGSH
Trigger: GTGGCTCCCACAAGAGATTTCTGAGCAGTCCAAGCCTGCATAGCATGGTGTGTGGCAGCGATAGAGGCAGATCAGGTGTCTCCTTCTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 90 bp CTCCCTGCTCCCTGCAACCCTCATCAGAAGAACCTGCGAAATACCTaGCGAGAAGCTGCCACTCAGCTTGACCATTTCCTTCAGATACTG +
Preference number: 5 (lower is better)
Translates to: LPAPCNPHQKNLRNT*REAATQLDHFLQIL
Trigger: CAGTATCTGAAGGAAATGGTCAAGCTGAGTGGCAGCTTCTCGGCAGGTATTTCGCAGGTTCTTCTGATGAGGGTTGCAGGGAGCAGGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 90 bp ACTCAGTTTCCTCTTGGAGGACAATCGCCTACGTTTCAGAGGAGATaGAGGGGCTGTGGCTGTGGCACTGTTAGGGTCCTTCTCATGGAT +
Preference number: 5 (lower is better)
Translates to: TQFPLGGQSPTFQRR*RGCGCGTVRVLLMD
Trigger: ATCCATGAGAAGGACCCTAACAGTGCCACAGCCACAGCCCCTCCATCTCCTCTGAAACGTAGGCGATTGTCCTCCAAGAGGAAACTGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000475946.5
ENST00000483150.1
CDS CCA 90 bp GCTTGTTGCACACGCTGCAGACCTTCTTCCTCTTGTCTGCCTTGCTaGCCACGCTTTTGGGGGAGTCTGTCTTTGGTTTCTTGTCATCGT +
Preference number: 5 (lower is better)
Translates to: ACCTRCRPSSSCLPC*PRFWGSLSLVSCHR
Trigger: ACGATGACAAGAAACCAAAGACAGACTCCCCCAAAAGCGTGGCCAGCAAGGCAGACAAGAGGAAGAAGGTCTGCAGCGTGTGCAACAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 90 bp CACTACCCGTGTTTTCTGCCTGGCAAGGCTGAGGATCAGAAACACTaGAGCTGCGAAGCCCCTACAATTGAAGCTGGATGGCAGAGCAAT +
Preference number: 5 (lower is better)
Translates to: HYPCFLPGKAEDQKH*SCEAPTIEAGWQSN
Trigger: ATTGCTCTGCCATCCAGCTTCAATTGTAGGGGCTTCGCAGCTCCAGTGTTTCTGATCCTCAGCCTTGCCAGGCAGAAAACACGGGTAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS-3UTR CAA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCGAACTTGACGTCATaGGGACAGGGGTTTAAGCTT +
Preference number: 5 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLANLTS*GQGFKL
Trigger: AAGCTTAAACCCCTGTCCCAATGACGTCAAGTTCGC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp CCTGGACCATGCTTGGGAAGACTGCTCACGGCCCCTTCTAAATTCTGCAGTGACGCGAACTTGACGTCATaGGGACAGGGGTTTAAGCTT +
Preference number: 5 (lower is better)
Translates to: PGPCLGRLLTAPSKFCSDANLTS*GQGFKL
Trigger: AAGCTTAAACCCCTGTCCCAATGACGTCAAGTTCGC...GTCACTGCAGAATTTAGAAGGGGCCGTGAGCAGTCTTCCCAAGCATGGTCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTGCCAATCCGATTaGGTCCTGGAGGCTTCGAGG +
Preference number: 5 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSFCQSD*VLEASR
Trigger: CCTCGAAGCCTCCAGGACCAAATCGGATTGGCAGAA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp TGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCTGTGCATGTTCCCATaGGTGGTAAATGACTGGCCA +
Preference number: 5 (lower is better)
Translates to: CFAFSKVISAVLQARPWLLCMFP*VVNDWP
Trigger: TGGCCAGTCATTTACCACCAATGGGAACATGCACAG...AAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCTGGATGCAGTTGCGCTaGGCCGCGAACGCGGCGCTG +
Preference number: 5 (lower is better)
Translates to: NLPWFWPETILETFINHIWMQLR*AANAAL
Trigger: CAGCGCCGCGTTCGCGGCCAAGCGCAACTGCATCCA...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTAAAGGCAGTGAGGGGCTaGCAGTCACCAAGGGCAGCG +
Preference number: 5 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLKAVRG*QSPRAA
Trigger: CGCTGCCCTTGGTGACTGCAAGCCCCTCACTGCCTT...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACAAGTCCAGGGGCTCATaGAAGTCCACCGCAAAGCTA +
Preference number: 5 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDKSRGS*KSTAKL
Trigger: TAGCTTTGCGGTGGACTTCAATGAGCCCCTGGACTT...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACCCTTTCCTGAAGTTCTaGGGGATGGACAGGTCGATG +
Preference number: 5 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDPFLKF*GMDRSM
Trigger: CATCGACCTGTCCATCCCCAAGAACTTCAGGAAAGG...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTATCCTCCTCAGGCTTCTaGGCTTCGCTGGGAGTGGCC +
Preference number: 5 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLSSSGF*ASLGVA
Trigger: GGCCACTCCCAGCGAAGCCAAGAAGCCTGAGGAGGA...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACAGAAACGGACTGAACTaGTTGGTGTCTGTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDRNGLN*LVSVVA
Trigger: GGCCACCACAGACACCAACAAGTTCAGTCCGTTTCT...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp CTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATCCTTCCCGTGGTGTTaGGCATGCCTGGCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: LTSNVPGHWVTALLSPKSSFPWC*ACLAFW
Trigger: CCAGAAAGCCAGGCATGCCAAACACCACGGGAAGGA...TGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTATCACCCCGCTCTTCCTaGTCGCTGTCCTTCCCGTGG +
Preference number: 5 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLSPRSS*SLSFPW
Trigger: CCACGGGAAGGACAGCGACAAGGAAGAGCGGGGTGA...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGCAGACCTTCTTCCTCTaGTCTGCCTTGCTGGCCACG +
Preference number: 5 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEQTFFL*SALLAT
Trigger: CGTGGCCAGCAAGGCAGACAAGAGGAAGAAGGTCTG...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGACCAGAACCGCTTGTaGCACACGCTGCAGACCTTC +
Preference number: 5 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEDQNRL*HTLQTF
Trigger: GAAGGTCTGCAGCGTGTGCAACAAGCGGTTCTGGTC...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAGCGACCAGAACCGCTaGTTGCACACGCTGCAGACC +
Preference number: 5 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWSDQNR*LHTLQT
Trigger: GGTCTGCAGCGTGTGCAACAAGCGGTTCTGGTCGCT...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTGGGTCACTGCTTaGCTTTCTCCAAAGTCATCT +
Preference number: 5 (lower is better)
Translates to: ASSHAPACLSLSLSLSLSHWVTA*LSPKSS
Trigger: AGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGTG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGGCCCTCTGGGTTGTTTaGTTTTCACAGCCAGGTGTT +
Preference number: 5 (lower is better)
Translates to: CLITVEELPPEGANHNRRALWVV*FSQPGV
Trigger: AACACCTGGCTGTGAAAACAAAACAACCCAGAGGGC...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS TCA 90 bp CTGCCCATTGCATCCCTGGGAAGTTGTTTGTGGACAAGCGCGTTGTaGCGCAGCAGTCCTCGATGTGTTCGAAAGGTGACACAACAAATG +
Preference number: 5 (lower is better)
Translates to: LPIASLGSCLWTSAL*RSSPRCVRKVTQQM
Trigger: CATTTGTTGTGTCACCTTTCGAACACATCGAGGACTGCTGCGTCACAACGCGCTTGTCCACAAACAACTTCCCAGGGATGCAATGGGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 90 bp CCAGGTCAGCATTTCAGAAGGAGACACCTGATCTGCCTCTATCGCTaGCACACACCATGCTATGCAGGCTTGGACTGCTCAGAAATCTCT +
Preference number: 5 (lower is better)
Translates to: PGQHFRRRHLICLYR*HTPCYAGLDCSEIS
Trigger: AGAGATTTCTGAGCAGTCCAAGCCTGCATAGCATGGTGTGTGGCAGCGATAGAGGCAGATCAGGTGTCTCCTTCTGAAATGCTGACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 90 bp CTGCCCTCACTACTCATGGAGCCGAGGTTCCTGTCAGAGCCCCCTTaGGCTCCCTATGTACCAATTCCCAACAGAGATTTAATGTCATCA +
Preference number: 5 (lower is better)
Translates to: LPSLLMEPRFLSEPP*APYVPIPNRDLMSS
Trigger: TGATGACATTAAATCTCTGTTGGGAATTGGTACATAGGGAGCCCAAGGGGGCTCTGACAGGAACCTCGGCTCCATGAGTAGTGAGGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS-3UTR CAA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCCGACATCATGGTGTaGATGGAAGATAGGTCTGAA +
Preference number: 5 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLADIMV*MEDRSE
Trigger: TTCAGACCTATCTTCCATCAACACCATGATGTCGGC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTATGCACCTCCGCAGGTTaGTTTCGCACCAGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLCTSAG*FRTRPE
Trigger: CTCAGGCCTGGTGCGAAACAAACCTGCGGAGGTGCA...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAGGCCTGCGGCTTTTCTaGACCCTGGTCTGCCGCCAC +
Preference number: 5 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSGLRLF*TLVCRH
Trigger: GTGGCGGCAGACCAGGGTCAAGAAAAGCCGCAGGCC...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGTGCTTTATGCTGTCCTaGGTCGCGGGGAGAACTGTG +
Preference number: 5 (lower is better)
Translates to: GNPMKYRRFALLAFVCAECFMLS*VAGRTV
Trigger: CACAGTTCTCCCCGCGACCAAGGACAGCATAAAGCA...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGTCGCCAGAGATGGGCTaGACCACAATGCTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: GNPMKYRRFALLAFVCAESPEMG*TTMLLS
Trigger: TGACAGCAGCATTGTGGTCAAGCCCATCTCTGGCGA...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTGCCTTGAGGTGCTTCTaGCGCAGGTGCCGCTCGCAG +
Preference number: 5 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTAALRCF*RRCRSQ
Trigger: CTGCGAGCGGCACCTGCGCAAGAAGCACCTCAAGGC...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTTCCTGAAGTTCTaGGGGATGGACAGGTCGATG +
Preference number: 5 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSPFLKF*GMDRSM
Trigger: CATCGACCTGTCCATCCCCAAGAACTTCAGGAAAGG...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp CTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCAAACGGACTGAACTTGTaGGTGTCTGTGGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: LTSNVPGHWVTALLSPKSNGLNL*VSVVAS
Trigger: GCTGGCCACCACAGACACCAACAAGTTCAGTCCGTT...TGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAGAAACGGACTGAACTaGTTGGTGTCTGTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSRNGLN*LVSVVA
Trigger: GGCCACCACAGACACCAACAAGTTCAGTCCGTTTCT...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp TGTCTCATTACAGTAGAAGAGCTACCACCCGAGGGTGCCAACCACAACCGCAGGGAAGGCATCGCATTTTaGACAAGGGAAGGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: CLITVEELPPEGANHNRREGIAF*TREGFL
Trigger: CAGAAACCCTTCCCTTGTCAAAAATGCGATGCCTTC...CCTGCGGTTGTGGTTGGCACCCTCGGGTGGTAGCTCTTCTACTGTAATGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334984.10
ENST00000379938.7
CDS-3UTR CAA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGTGGTTGCTGGCATaGGGAGCCAGCTCAGCCTCG +
Preference number: 5 (lower is better)
Translates to: PRTNIAHLILLTAENSKLMWLLA*GASSAS
Trigger: CGAGGCTGAGCTGGCTCCCAATGCCAGCAACCACAT...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGATTTTCTTCCAGTTATaGGCTATGGGTACCCAAGGG +
Preference number: 5 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLIFFQL*AMGTQG
Trigger: CCCTTGGGTACCCATAGCCAATAACTGGAAGAAAAT...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGCCTGAAACCATATaGGAAACCTTCATCAACCAC +
Preference number: 5 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLWPETI*ETFINH
Trigger: GTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp CTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATTGAAGTCCATGAGCTaGGTGGCGAAGTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: LTSNVPGHWVTALLSPKSLKSMS*VAKSRS
Trigger: GGACCTGGACTTCGCCACCAAGCTCATGGACTTCAA...TGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGGGGGAGTCTGTCTTaGGTTTCTTGTCATCGTCGC +
Preference number: 5 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSWGSLS*VSCHRR
Trigger: GCGACGATGACAAGAAACCAAAGACAGACTCCCCCA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGTTGCTGGCCACGCTTTaGGGGGAGTCTGTCTTTGGT +
Preference number: 5 (lower is better)
Translates to: GNPMKYRRFALLAFVCAELLATL*GESVFG
Trigger: ACCAAAGACAGACTCCCCCAAAAGCGTGGCCAGCAA...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp CACAGCTGGGTAAGGCTTGGATTAGGCTTAGCAGGAAGACTGGGAATACCTCGCAGTGAGGGAAGTCTATaGCCTGCACAGGATGCTCAT +
Preference number: 5 (lower is better)
Translates to: HSWVRLGLGLAGRLGIPRSEGSL*PAQDAH
Trigger: ATGAGCATCCTGTGCAGGCAATAGACTTCCCTCACT...GCGAGGTATTCCCAGTCTTCCTGCTAAGCCTAATCCAAGCCTTACCCAGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS TCA 90 bp GAGGAGTGGGGTCTAGGCCTGACAACCAGTCTGTGCCCAACCCAATaGTCAGGCAATTTCTTGAGACTGGGGAGTTCCGTAAAGACATTT +
Preference number: 5 (lower is better)
Translates to: EEWGLGLTTSLCPTQ*SGNFLRLGSSVKTF
Trigger: AAATGTCTTTACGGAACTCCCCAGTCTCAAGAAATTGCCTGATCATTGGGTTGGGCACAGACTGGTTGTCAGGCCTAGACCCCACTCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 90 bp AAGGAGACACCTGATCTGCCTCTATCGCTGCCACACACCATGCTATaGAGGCTTGGACTGCTCAGAAATCTCTTGTGGGAGCCACATTAT +
Preference number: 5 (lower is better)
Translates to: KETPDLPLSLPHTML*RLGLLRNLLWEPHY
Trigger: ATAATGTGGCTCCCACAAGAGATTTCTGAGCAGTCCAAGCCTGCATAGCATGGTGTGTGGCAGCGATAGAGGCAGATCAGGTGTCTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS-3UTR CAA 90 bp GCTTTGCTTTCTCCAAAGTCATCTCTGCAGTGCTCCAGGCACGGCCCTGGCTTCTTGACACTGTTTTCTTaGTGTTATCAAGCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: ALLSPKSSLQCSRHGPGFLTLFS*CYQAAL
Trigger: GAGGGCAGCTTGATAACACAAAGAAAACAGTGTCAA...GAAGCCAGGGCCGTGCCTGGAGCACTGCAGAGATGACTTTGGAGAAAGCAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp CCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGGGACGCCGACATCATGGTGTaGATGGAAGATAGGTCTGAA +
Preference number: 5 (lower is better)
Translates to: PMKYRRFALLAFVCAEGDADIMV*MEDRSE
Trigger: TTCAGACCTATCTTCCATCAACACCATGATGTCGGC...GTCCCCCTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTCTCCAGTCCATACTaGCAAACAAACTCCTTGAAA +
Preference number: 5 (lower is better)
Translates to: SEQPRSCLSLSLSLSLSLVSSPY*QTNSLK
Trigger: TTTCAAGGAGTTTGTTTGCAAGTATGGACTGGAGAC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp CTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATGCATCCCTGGGAAGTaGTTTGTGGACAAGCGCGTT +
Preference number: 5 (lower is better)
Translates to: LTSNVPGHWVTALLSPKSCIPGK*FVDKRV
Trigger: AACGCGCTTGTCCACAAACAACTTCCCAGGGATGCA...TGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCGCAGGCCTGACGTCTTaGGTGTGCTGCAGGCCAAGC +
Preference number: 5 (lower is better)
Translates to: NLPWFWPETILETFINHIAGLTS*VCCRPS
Trigger: GCTTGGCCTGCAGCACACCAAAGACGTCAGGCCTGC...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGTCCTTGCGGGTGGCCTaGAGGTGCTTCTTGCGCAGG +
Preference number: 5 (lower is better)
Translates to: RTNIAHLILLTAENSKLMSLRVA*RCFLRR
Trigger: CCTGCGCAAGAAGCACCTCAAGGCCACCCGCAAGGA...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTATGTGGTGGATGCAGTaGCGCTTGGCCGCGAACGCG +
Preference number: 5 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTAMWWMQ*RLAANA
Trigger: CGCGTTCGCGGCCAAGCGCAACTGCATCCACCACAT...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTAACGTGCAGGTGCTGCTaGAGGATGTGGTGGATGCAG +
Preference number: 5 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLTCRCC*RMWWMQ
Trigger: CTGCATCCACCACATCCTCAAGCAGCACCTGCACGT...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAAAGGCAGTGAGGGGCTaGCAGTCACCAAGGGCAGCG +
Preference number: 5 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSKAVRG*QSPRAA
Trigger: CGCTGCCCTTGGTGACTGCAAGCCCCTCACTGCCTT...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGAAGGCAGTGAGGGGCTaGCAGTCACCAAGGGCAGCG +
Preference number: 5 (lower is better)
Translates to: RTNIAHLILLTAENSKLMKAVRG*QSPRAA
Trigger: CGCTGCCCTTGGTGACTGCAAGCCCCTCACTGCCTT...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGGAGTGGCCAAATCCTaGTCCCCTTTCCTGAAGTTC +
Preference number: 5 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEGVAKS*SPFLKF
Trigger: GAACTTCAGGAAAGGGGACAAGGATTTGGCCACTCC...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAACGGACTGAACTTGTaGGTGTCTGTGGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWNGLNL*VSVVAS
Trigger: GCTGGCCACCACAGACACCAACAAGTTCAGTCCGTT...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp ATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATCTCTGCAGTATCTTCTGCAGGCAGTaGGTGTACGAGTTCCGCTTG +
Preference number: 5 (lower is better)
Translates to: MCLVTGSLLCFLQSHLCSIFCRQ*VYEFRL
Trigger: CAAGCGGAACTCGTACACCAACTGCCTGCAGAAGAT...ACTGCAGAGATGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GCAGTGGGGTACATTCTCCTCCCTGCAGGCGGAGACAGTGAGGGAAGTCTATTGCGTTCACAGTTAGATTaGGTAGAAAAGAAGGCATCG +
Preference number: 5 (lower is better)
Translates to: AVGYILLPAGGDSEGSLLRSQLD*VEKKAS
Trigger: CGATGCCTTCTTTTCTACCAAATCTAACTGTGAACG...CAATAGACTTCCCTCACTGTCTCCGCCTGCAGGGAGGAGAATGTACCCCACTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR CAA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGTCACCCCGCTCTTCCTaGTCGCTGTCCTTCCCGTGG +
Preference number: 5 (lower is better)
Translates to: RTNIAHLILLTAENSKLMSPRSS*SLSFPW
Trigger: CCACGGGAAGGACAGCGACAAGGAAGAGCGGGGTGA...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp AAGGCTATGGCACTGAGCGAGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTACAAATATTGCCCATTaGATTCTGCTCACTGCAGAG +
Preference number: 5 (lower is better)
Translates to: KAMALSEQPRSCLSLSLSTNIAH*ILLTAE
Trigger: CTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGT...AGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCTCGCTCAGTGCCATAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTTTGGTTTCTaGTCATCGTCGCTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: ATLLLVSLSLSLSLSLSLSVFGF*SSSLFS
Trigger: AGAGAAGAGCGACGATGACAAGAAACCAAAGACAGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp CTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATGGGGGAGTCTGTCTTaGGTTTCTTGTCATCGTCGC +
Preference number: 5 (lower is better)
Translates to: LTSNVPGHWVTALLSPKSWGSLS*VSCHRR
Trigger: GCGACGATGACAAGAAACCAAAGACAGACTCCCCCA...TGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGTGGGGGAGTCTGTCTTaGGTTTCTTGTCATCGTCGC +
Preference number: 5 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEWGSLS*VSCHRR
Trigger: GCGACGATGACAAGAAACCAAAGACAGACTCCCCCA...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS TCA 90 bp ATCTTTTTAGCTGGTGCTGGGTCTTCTCTCTCTGACTCGGCATCGTaGCTCAGTTTCCTCTTGGAGGACAATCGCCTACGTTTCAGAGGA +
Preference number: 5 (lower is better)
Translates to: IFLAGAGSSLSDSAS*LSFLLEDNRLRFRG
Trigger: TCCTCTGAAACGTAGGCGATTGTCCTCCAAGAGGAAACTGAGTCACGATGCCGAGTCAGAGAGAGAAGACCCAGCACCAGCTAAAAAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000475946.5
ENST00000483150.1
CDS TCA 90 bp ACCAGGCCTGAGAAATGCGAGGAAACTTCCTACAGGAGAAGTCCGTaGATCCTAAGTCGTGGAAGCCAGCAGGAATTGAAGGGTTGTTCT +
Preference number: 5 (lower is better)
Translates to: TRPEKCEETSYRRSP*ILSRGSQQELKGCS
Trigger: AGAACAACCCTTCAATTCCTGCTGGCTTCCACGACTTAGGATTCACGGACTTCTCCTGTAGGAAGTTTCCTCGCATTTCTCAGGCCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS TCA 90 bp CGACTGACTGTCTGTGCTATCATGGGATCCAACATCACTCTCTTTTaGCTGGGGGATAAGCCCGTTTCTTCTCAGGGAACAGGTGGTAAC +
Preference number: 5 (lower is better)
Translates to: RLTVCAIMGSNITLF*LGDKPVSSQGTGGN
Trigger: GTTACCACCTGTTCCCTGAGAAGAAACGGGCTTATCCCCCAGTCAAAAGAGAGTGATGTTGGATCCCATGATAGCACAGACAGTCAGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS TCA 90 bp TTAAGCCAACCCCTCACCAAACACAGGGCATTATTAGTAAACAGGTaGGGAAAATCCTCTAGGTCGGCTAGCTGGACGTGCAGGACTGAG +
Preference number: 5 (lower is better)
Translates to: LSQPLTKHRALLVNR*GKSSRSASWTCRTE
Trigger: CTCAGTCCTGCACGTCCAGCTAGCCGACCTAGAGGATTTTCCTCACCTGTTTACTAATAATGCCCTGTGTTTGGTGAGGGGTTGGCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS TCA 90 bp GAGAAGGGGGATAAGTGCAGGAGAGTGAGAAGGCAACAGCTGTTTTaGGTTACAAACCTTCAGTCTAAGCGGGTAGCATCCCACTGTGGT +
Preference number: 5 (lower is better)
Translates to: EKGDKCRRVRRQQLF*VTNLQSKRVASHCG
Trigger: ACCACAGTGGGATGCTACCCGCTTAGACTGAAGGTTTGTAACTCAAAACAGCTGTTGCCTTCTCACTCTCCTGCACTTATCCCCCTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 90 bp ACCAGTGCTGTGCCAGGGGTATCCAACACGTGGGCTGTCCCTGTTTaGGCCACATATTCATGCATTGCTAATAGTCATTTGAGTTGCAAC +
Preference number: 5 (lower is better)
Translates to: TSAVPGVSNTWAVPV*ATYSCIANSHLSCN
Trigger: GTTGCAACTCAAATGACTATTAGCAATGCATGAATATGTGGCCCAAACAGGGACAGCCCACGTGTTGGATACCCCTGGCACAGCACTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS-3UTR CAA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTCTTCTTCTCTaGGTAGTACTCGTTGACACT +
Preference number: 5 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLSCLLL*VVLVDT
Trigger: AGTGTCAACGAGTACTACCAAGAGAAGAAGACAAGA...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp AGCAGCCACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGTCTCCAGTCCATACTaGCAAACAAACTCCTTGAAA +
Preference number: 5 (lower is better)
Translates to: SSHAPACLSLSLSLSLSLVSSPY*QTNSLK
Trigger: TTTCAAGGAGTTTGTTTGCAAGTATGGACTGGAGAC...GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGTGGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp TGGCTTCTTGATGCCTGTTCCCTGGATGCATGCATCCTCACTCCACCCTCTCTGGTCTCCAGTCCATACTaGCAAACAAACTCCTTGAAA +
Preference number: 5 (lower is better)
Translates to: WLLDACSLDACILTPPSLVSSPY*QTNSLK
Trigger: TTTCAAGGAGTTTGTTTGCAAGTATGGACTGGAGAC...CAGAGAGGGTGGAGTGAGGATGCATGCATCCAGGGAACAGGCATCAAGAAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGTGCACCTCCGCAGGTTaGTTTCGCACCAGGCCTGAG +
Preference number: 5 (lower is better)
Translates to: RTNIAHLILLTAENSKLMCTSAG*FRTRPE
Trigger: CTCAGGCCTGGTGCGAAACAAACCTGCGGAGGTGCA...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATGCAGGCCTGACGTCTTaGGTGTGCTGCAGGCCAAGC +
Preference number: 5 (lower is better)
Translates to: TEREEEAIKYILSVHVFHAGLTS*VCCRPS
Trigger: GCTTGGCCTGCAGCACACCAAAGACGTCAGGCCTGC...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGGTGTCTGGAGCTGAATaGCCTGGTTGTCATCCGGCA +
Preference number: 5 (lower is better)
Translates to: PRTNIAHLILLTAENSKLVSGAE*PGCHPA
Trigger: TGCCGGATGACAACCAGGCAATTCAGCTCCAGACAC...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATGCCTCCACTGAGCCTTaGAGGAGCTTCAGGGGCGGT +
Preference number: 5 (lower is better)
Translates to: TEREEEAIKYILSVHVFHASTEP*RSFRGG
Trigger: ACCGCCCCTGAAGCTCCTCAAAGGCTCAGTGGAGGC...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATGCGGTGGTGGCGGCTTaGGGGACAGAACCTCCTAAG +
Preference number: 5 (lower is better)
Translates to: TEREEEAIKYILSVHVFHAVVAA*GTEPPK
Trigger: CTTAGGAGGTTCTGTCCCCAAAGCCGCCACCACCGC...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTATGTGGTTGCTGGCATaGGGAGCCAGCTCAGCCTCG +
Preference number: 5 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTAMWLLA*GASSAS
Trigger: CGAGGCTGAGCTGGCTCCCAATGCCAGCAACCACAT...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp CTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCAAGTGAGGGAAGTCTATaGCCTGCACAGGATGCTCAT +
Preference number: 5 (lower is better)
Translates to: LTSNVPGHWVTALLSPKSSEGSL*PAQDAH
Trigger: ATGAGCATCCTGTGCAGGCAATAGACTTCCCTCACT...TGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS TCA 90 bp TACTGGGCAGTGAAAGACTTCATCAGCTTTCTTCTCCAAGTCACCTaGCTGCCCGTCTTCTACCATCTTTTTAGCTGGTGCTGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: YWAVKDFISFLLQVT*LPVFYHLFSWCWVF
Trigger: GAAGACCCAGCACCAGCTAAAAAGATGGTAGAAGACGGGCAGTCAGGTGACTTGGAGAAGAAAGCTGATGAAGTCTTTCACTGCCCAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000475946.5
ENST00000483150.1
CDS TCA 90 bp ACCAAGTCTTGGCATACCAAGGACGAAGTAACCTTGCCTCCTTTCTaGGTGTGCACTACCAACAGGACTCAAACTCATGAGAGGCAGGTT +
Preference number: 5 (lower is better)
Translates to: TKSWHTKDEVTLPPF*VCTTNRTQTHERQV
Trigger: AACCTGCCTCTCATGAGTTTGAGTCCTGTTGGTAGTGCACACTCAGAAAGGAGGCAAGGTTACTTCGTCCTTGGTATGCCAAGACTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 90 bp GACAACTCTCAGCCAACTTTTTCCCCACACCGATACTTTCTTAACTaGCTCCCTAATGTTGTTGTGCCCAAGTTCAATCACTGGAGCCCG +
Preference number: 5 (lower is better)
Translates to: DNSQPTFSPHRYFLN*LPNVVVPKFNHWSP
Trigger: CGGGCTCCAGTGATTGAACTTGGGCACAACAACATTAGGGAGGCAGTTAAGAAAGTATCGGTGTGGGGAAAAAGTTGGCTGAGAGTTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 90 bp ATCTGCCTCTATCGCTGCCACACACCATGCTATGCAGGCTTGGACTaGTCAGAAATCTCTTGTGGGAGCCACATTATTTTTCCTGCAGAA +
Preference number: 5 (lower is better)
Translates to: ICLYRCHTPCYAGLD*SEISCGSHIIFPAE
Trigger: TTCTGCAGGAAAAATAATGTGGCTCCCACAAGAGATTTCTGAGCAGTCCAAGCCTGCATAGCATGGTGTGTGGCAGCGATAGAGGCAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 90 bp ACCTCTGTTCATAGCCCCCGGAAGTGTTTAAAATCTGTTTCTGCCTaGCCAAGCCTCAGACTCACAGACTCTTCAACAGAAGATGCTGAC +
Preference number: 5 (lower is better)
Translates to: TSVHSPRKCLKSVSA*PSLRLTDSSTEDAD
Trigger: GTCAGCATCTTCTGTTGAAGAGTCTGTGAGTCTGAGGCTTGGGCAGGCAGAAACAGATTTTAAACACTTCCGGGGGCTATGAACAGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 90 bp CCGTTTCTTCTCAGGGAACAGGTGGTAACTCCGTGTTTGCGCAACTaGTGGCGTTCACAGTTAGATTTGGTAGAAAAGAAGGCATCGCAT +
Preference number: 5 (lower is better)
Translates to: PFLLREQVVTPCLRN*WRSQLDLVEKKASH
Trigger: ATGCGATGCCTTCTTTTCTACCAAATCTAACTGTGAACGCCACCAGTTGCGCAAACACGGAGTTACCACCTGTTCCCTGAGAAGAAACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334984.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGGCAGACAAAACGGTGTaGCTCGCTGATGCACCTCCG +
Preference number: 5 (lower is better)
Translates to: RTNIAHLILLTAENSKLMADKTV*LADAPP
Trigger: CGGAGGTGCATCAGCGAGCAACACCGTTTTGTCTGC...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAAGCATGGGGAACGCCTaGTCACAGGTGTCGCAGACA +
Preference number: 5 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSSMGNA*SQVSQT
Trigger: TGTCTGCGACACCTGTGACAAGGCGTTCCCCATGCT...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCACGTGCAGGTGCTGCTaGAGGATGTGGTGGATGCAG +
Preference number: 5 (lower is better)
Translates to: NLPWFWPETILETFINHITCRCC*RMWWMQ
Trigger: CTGCATCCACCACATCCTCAAGCAGCACCTGCACGT...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTACGTGCAGGTGCTGCTaGAGGATGTGGTGGATGCAG +
Preference number: 5 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTATCRCC*RMWWMQ
Trigger: CTGCATCCACCACATCCTCAAGCAGCACCTGCACGT...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGAGAAACGGACTGAACTaGTTGGTGTCTGTGGTGGCC +
Preference number: 5 (lower is better)
Translates to: PRTNIAHLILLTAENSKLRNGLN*LVSVVA
Trigger: GGCCACCACAGACACCAACAAGTTCAGTCCGTTTCT...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp ACAGTGACCATGTCTAATGCTGACAGACTGGAAATGGACATGAGGCTGAAGCTAATCTTCTGCAGGCAGTaGGTGTACGAGTTCCGCTTG +
Preference number: 5 (lower is better)
Translates to: TVTMSNADRLEMDMRLKLIFCRQ*VYEFRL
Trigger: CAAGCGGAACTCGTACACCAACTGCCTGCAGAAGAT...TAGCTTCAGCCTCATGTCCATTTCCAGTCTGTCAGCATTAGACATGGTCACTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGGAAGGCATCGCATTTTaGACAAGGGAAGGGTTTCTG +
Preference number: 5 (lower is better)
Translates to: GNPMKYRRFALLAFVCAEEGIAF*TREGFL
Trigger: CAGAAACCCTTCCCTTGTCAAAAATGCGATGCCTTC...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000334984.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGTCCTTCCCGTGGTGTTaGGCATGCCTGGCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: RTNIAHLILLTAENSKLMSFPWC*ACLAFW
Trigger: CCAGAAAGCCAGGCATGCCAAACACCACGGGAAGGA...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTGTCTTTGGTTTCTaGTCATCGTCGCTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSSVFGF*SSSLFS
Trigger: AGAGAAGAGCGACGATGACAAGAAACCAAAGACAGA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp CCCAGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGTGGGGGAGTCTGTCTTaGGTTTCTTGTCATCGTCGC +
Preference number: 5 (lower is better)
Translates to: PRTNIAHLILLTAENSKLWGSLS*VSCHRR
Trigger: GCGACGATGACAAGAAACCAAAGACAGACTCCCCCA...CAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTGACCAGAACCGCTTGTaGCACACGCTGCAGACCTTC +
Preference number: 5 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTADQNRL*HTLQTF
Trigger: GAAGGTCTGCAGCGTGTGCAACAAGCGGTTCTGGTC...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATAGCGACCAGAACCGCTaGTTGCACACGCTGCAGACC +
Preference number: 5 (lower is better)
Translates to: TEREEEAIKYILSVHVFHSDQNR*LHTLQT
Trigger: GGTCTGCAGCGTGTGCAACAAGCGGTTCTGGTCGCT...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS TCA 90 bp ATCCTAAGTCGTGGAAGCCAGCAGGAATTGAAGGGTTGTTCTGTATaGAAGGTCTGCCCATTGCATCCCTGGGAAGTTGTTTGTGGACAA +
Preference number: 5 (lower is better)
Translates to: ILSRGSQQELKGCSV*KVCPLHPWEVVCGQ
Trigger: TTGTCCACAAACAACTTCCCAGGGATGCAATGGGCAGACCTTTCATACAGAACAACCCTTCAATTCCTGCTGGCTTCCACGACTTAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS TCA 90 bp GTAACGTACCCTAGGAGGGAAAGAAGAACCCTCCCGCCACACTGCTaGTTACCTCCATTTTCTGACCCACTGATAGACTATGAAACTTTC +
Preference number: 5 (lower is better)
Translates to: VTYPRRERRTLPPHC*LPPFSDPLIDYETF
Trigger: GAAAGTTTCATAGTCTATCAGTGGGTCAGAAAATGGAGGTAATCAGCAGTGTGGCGGGAGGGTTCTTCTTTCCCTCCTAGGGTACGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS TCA 90 bp GGAACACAAGGATTATCTGGTCCTGCCCTCCTTCAATTTGAAGGATaGGAAAACAGGTTCAGATGTAGCTGGCTGAGGTCCTGTATGAGC +
Preference number: 5 (lower is better)
Translates to: GTQGLSGPALLQFEG*ENRFRCSWLRSCMS
Trigger: GCTCATACAGGACCTCAGCCAGCTACATCTGAACCTGTTTTCTCATCCTTCAAATTGAAGGAGGGCAGGACCAGATAATCCTTGTGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS TCA 90 bp TCTAAGCGGGTAGCATCCCACTGTGGTTCTGCTGCCTCTGGGATTTaGAATGGAGCTGGTGTCTATTTTAGTTCTGGGTTAACAAGCTGT +
Preference number: 5 (lower is better)
Translates to: SKRVASHCGSAASGI*NGAGVYFSSGLTSC
Trigger: ACAGCTTGTTAACCCAGAACTAAAATAGACACCAGCTCCATTTCAAATCCCAGAGGCAGCAGAACCACAGTGGGATGCTACCCGCTTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 90 bp CTGGTCCATATATCAGGGATTCAGGCAAACAGATGCCCAAATTCCTaGATTCCCAAGCTGTCTTCTAAAACCCAAAGCTGCACGCGTGTA +
Preference number: 5 (lower is better)
Translates to: LVHISGIQANRCPNS*IPKLSSKTQSCTRV
Trigger: TACACGCGTGCAGCTTTGGGTTTTAGAAGACAGCTTGGGAATGCAGGAATTTGGGCATCTGTTTGCCTGAATCCCTGATATATGGACCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS-3UTR CAA 90 bp ACGCTCCTGCTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTGACACTGTTTTCTTaGTGTTATCAAGCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: TLLLVSLSLSLSLSLSLSLTLFS*CYQAAL
Trigger: GAGGGCAGCTTGATAACACAAAGAAAACAGTGTCAA...AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACAAGCAGGAGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS-3UTR CAA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCTTCTGCCAATCCGATTaGGTCCTGGAGGCTTCGAGG +
Preference number: 5 (lower is better)
Translates to: NLPWFWPETILETFINHIFCQSD*VLEASR
Trigger: CCTCGAAGCCTCCAGGACCAAATCGGATTGGCAGAA...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCGCCACATGGGTCTGCTaGTGCAGAGCCAGTGAGCAG +
Preference number: 5 (lower is better)
Translates to: YTEREEEAIKYILSVHVFATWVC*CRASEQ
Trigger: CTGCTCACTGGCTCTGCACAAGCAGACCCATGTGGC...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCAGAGGGGGCATGTGCTaGAAGATCGCCTGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: YTEREEEAIKYILSVHVFRGGMC*KIACSG
Trigger: CCCACTGCAGGCGATCTTCAAGCACATGCCCCCTCT...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCTGGCGGGCTCCAACTaGATCGAGACATGGGGAGGT +
Preference number: 5 (lower is better)
Translates to: YTEREEEAIKYILSVHVFLAGSN*IETWGG
Trigger: ACCTCCCCATGTCTCGATCAAGTTGGAGCCCGCCAG...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTAACGGACTGAACTTGTaGGTGTCTGTGGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTANGLNL*VSVVAS
Trigger: GCTGGCCACCACAGACACCAACAAGTTCAGTCCGTT...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCAACGGACTGAACTTGTaGGTGTCTGTGGTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: NLPWFWPETILETFINHINGLNL*VSVVAS
Trigger: GCTGGCCACCACAGACACCAACAAGTTCAGTCCGTT...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp CTCACGAGTAATGTGCCTGGTCACTGGGTCACTGCTTTGCTTTCTCCAAAGTCATGGCCTGAAACCATATaGGAAACCTTCATCAACCAC +
Preference number: 5 (lower is better)
Translates to: LTSNVPGHWVTALLSPKSWPETI*ETFINH
Trigger: GTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCA...TGACTTTGGAGAAAGCAAAGCAGTGACCCAGTGACCAGGCACATTACTCGTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GGAAACCCCATGAAGTATAGACGCTTTGCTCTGCTGGCTTTTGTCTGTGCTGAGTCTGTCTTTGGTTTCTaGTCATCGTCGCTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: GNPMKYRRFALLAFVCAESVFGF*SSSLFS
Trigger: AGAGAAGAGCGACGATGACAAGAAACCAAAGACAGA...CTCAGCACAGACAAAAGCCAGCAGAGCAAAGCGTCTATACTTCATGGGGTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GGACATGAGGCTGAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGTGTGGCAAGACCTTATaGACTACGAGGGTACAGATC +
Preference number: 5 (lower is better)
Translates to: GHEAEARIFPGFGLKPYWCGKTL*TTRVQI
Trigger: GATCTGTACCCTCGTAGTCAATAAGGTCTTGCCACA...CCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTCAGCCTCATGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS TCA 90 bp TCCAGTCCATACTTGCAAACAAACTCCTTGAAACATACTGGGCAGTaGAAGACTTCATCAGCTTTCTTCTCCAAGTCACCTGACTGCCCG +
Preference number: 5 (lower is better)
Translates to: SSPYLQTNSLKHTGQ*KTSSAFFSKSPDCP
Trigger: CGGGCAGTCAGGTGACTTGGAGAAGAAAGCTGATGAAGTCTTTCACTGCCCAGTATGTTTCAAGGAGTTTGTTTGCAAGTATGGACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000475946.5
ENST00000483150.1
CDS TCA 90 bp GGGTCTCCATGTGGGTCTCCAGTCCATACTTGCAAACAAACTCCTTaGAACATACTGGGCAGTGAAAGACTTCATCAGCTTTCTTCTCCA +
Preference number: 5 (lower is better)
Translates to: GSPCGSPVHTCKQTP*NILGSERLHQLSSP
Trigger: TGGAGAAGAAAGCTGATGAAGTCTTTCACTGCCCAGTATGTTTCAAGGAGTTTGTTTGCAAGTATGGACTGGAGACCCACATGGAGACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000475946.5
ENST00000483150.1
CDS CCA 90 bp CAAGGTCTAGTTCACTCTTTCTCCTACCTTAGTGGGTTATCTGAATaGGTCTCCATGTGGGTCTCCAGTCCATACTTGCAAACAAACTCC +
Preference number: 5 (lower is better)
Translates to: QGLVHSFSYLSGLSE*VSMWVSSPYLQTNS
Trigger: GGAGTTTGTTTGCAAGTATGGACTGGAGACCCACATGGAGACCCATTCAGATAACCCACTAAGGTAGGAGAAAGAGTGAACTAGACCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 90 bp GTTCAACTTCACAGCCTGTCTACAGCACCAGCCCTACCATCACTGTaGATTAATCACCCACCAAATCCTACCCATCCCAACTATGAAAAA +
Preference number: 5 (lower is better)
Translates to: VQLHSLSTAPALPSL*INHPPNPTHPNYEK
Trigger: TTTTTCATAGTTGGGATGGGTAGGATTTGGTGGGTGATTAATCCACAGTGATGGTAGGGCTGGTGCTGTAGACAGGCTGTGAAGTTGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS-3UTR CAA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCGCAGACAAAACGGTGTaGCTCGCTGATGCACCTCCG +
Preference number: 5 (lower is better)
Translates to: YTEREEEAIKYILSVHVFADKTV*LADAPP
Trigger: CGGAGGTGCATCAGCGAGCAACACCGTTTTGTCTGC...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATTGCTTTATGCTGTCCTaGGTCGCGGGGAGAACTGTG +
Preference number: 5 (lower is better)
Translates to: TEREEEAIKYILSVHVFHCFMLS*VAGRTV
Trigger: CACAGTTCTCCCCGCGACCAAGGACAGCATAAAGCA...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCATCTCCTGCTTGATCTaGGCCTCCATGCTCAGCGGC +
Preference number: 5 (lower is better)
Translates to: YTEREEEAIKYILSVHVFISCLI*ASMLSG
Trigger: GCCGCTGAGCATGGAGGCCAAGATCAAGCAGGAGAT...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGAAGTCCAGGGGCTCATaGAAGTCCACCGCAAAGCTA +
Preference number: 5 (lower is better)
Translates to: RTNIAHLILLTAENSKLMKSRGS*KSTAKL
Trigger: TAGCTTTGCGGTGGACTTCAATGAGCCCCTGGACTT...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTAAGTCCAGGGGCTCATaGAAGTCCACCGCAAAGCTA +
Preference number: 5 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTAKSRGS*KSTAKL
Trigger: TAGCTTTGCGGTGGACTTCAATGAGCCCCTGGACTT...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAAAGTCCAGGGGCTCATaGAAGTCCACCGCAAAGCTA +
Preference number: 5 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSKSRGS*KSTAKL
Trigger: TAGCTTTGCGGTGGACTTCAATGAGCCCCTGGACTT...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAGGGCTGAGGAGTAGATaGGGACCGCCAGCTGAACAG +
Preference number: 5 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKGLRSR*GPPAEQ
Trigger: CTGTTCAGCTGGCGGTCCCAATCTACTCCTCAGCCC...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAATTCTCTGAGACGGCGTaGTTGCCGCTGTGGGTGGAC +
Preference number: 5 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKFSETA*LPLWVD
Trigger: GTCCACCCACAGCGGCAACAACGCCGTCTCAGAGAA...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAATGTGGTTGCTGGCATaGGGAGCCAGCTCAGCCTCG +
Preference number: 5 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKMWLLA*GASSAS
Trigger: CGAGGCTGAGCTGGCTCCCAATGCCAGCAACCACAT...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS TCA 90 bp GCTATAAAACCTAGGAGGGAAAGAAGAACCCTCCCGCCACACTGCTaGTTACCTCCATTTTCTGACCCACTGATAGACTATGAAACTTTC +
Preference number: 5 (lower is better)
Translates to: AIKPRRERRTLPPHC*LPPFSDPLIDYETF
Trigger: GAAAGTTTCATAGTCTATCAGTGGGTCAGAAAATGGAGGTAATCAGCAGTGTGGCGGGAGGGTTCTTCTTTCCCTCCTAGGTTTTATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491191.5
CDS CCA 90 bp TTTCTTCTCAGGGAACAGGTGGTAACTCCGTGTTTGCGCAACTGGTaGCGTTCACAGTTAGATTTGGTAGAAAAGAAGGCATCGCATTTT +
Preference number: 5 (lower is better)
Translates to: FLLREQVVTPCLRNW*RSQLDLVEKKASHF
Trigger: AAAATGCGATGCCTTCTTTTCTACCAAATCTAACTGTGAACGCCACCAGTTGCGCAAACACGGAGTTACCACCTGTTCCCTGAGAAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334984.10
ENST00000379938.7
CDS CCA 90 bp CCACACACCATGCTATGCAGGCTTGGACTGCTCAGAAATCTCTTGTaGGAGCCACATTATTTTTCCTGCAGAACAGAATTATCTAGAAGG +
Preference number: 5 (lower is better)
Translates to: PHTMLCRLGLLRNLL*EPHYFSCRTELSRR
Trigger: CCTTCTAGATAATTCTGTTCTGCAGGAAAAATAATGTGGCTCCCACAAGAGATTTCTGAGCAGTCCAAGCCTGCATAGCATGGTGTGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS-3UTR CAA 90 bp AATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAACCACATCGCGAACTTGACGTCATaGGGACAGGGGTTTAAGCTT +
Preference number: 5 (lower is better)
Translates to: NLPWFWPETILETFINHIANLTS*GQGFKL
Trigger: AAGCTTAAACCCCTGTCCCAATGACGTCAAGTTCGC...GATGTGGTTGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCTCGCCAGAGATGGGCTaGACCACAATGCTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: YTEREEEAIKYILSVHVFSPEMG*TTMLLS
Trigger: TGACAGCAGCATTGTGGTCAAGCCCATCTCTGGCGA...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp CACCTCACTAATAAAATGTGGCAAGACCTTATTGACTACGAGGGTACAGATCAAAAGTCCAGGGGCTCATaGAAGTCCACCGCAAAGCTA +
Preference number: 5 (lower is better)
Translates to: HLTNKMWQDLIDYEGTDQKSRGS*KSTAKL
Trigger: TAGCTTTGCGGTGGACTTCAATGAGCCCCTGGACTT...TTGATCTGTACCCTCGTAGTCAATAAGGTCTTGCCACATTTTATTAGTGAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR CAA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAATTCCTCTTGTCTGCCTaGCTGGCCACGCTTTTGGGG +
Preference number: 5 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKFLLSA*LATLLG
Trigger: CCCCAAAAGCGTGGCCAGCAAGGCAGACAAGAGGAA...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS TCA 90 bp TCAGAAGAACCTGCGAAATACCTGCCGAGAAGCTGCCACTCAGCTTaGCCATTTCCTTCAGATACTGAATTCCTTCCTCATTATTGTGTT +
Preference number: 5 (lower is better)
Translates to: SEEPAKYLPRSCHSA*PFPSDTEFLPHYCV
Trigger: AACACAATAATGAGGAAGGAATTCAGTATCTGAAGGAAATGGTCAAGCTGAGTGGCAGCTTCTCGGCAGGTATTTCGCAGGTTCTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 90 bp CACTCTTTCTCCTACCTTAGTGGGTTATCTGAATGGGTCTCCATGTaGGTCTCCAGTCCATACTTGCAAACAAACTCCTTGAAACATACT +
Preference number: 5 (lower is better)
Translates to: HSFSYLSGLSEWVSM*VSSPYLQTNSLKHT
Trigger: AGTATGTTTCAAGGAGTTTGTTTGCAAGTATGGACTGGAGACCCACATGGAGACCCATTCAGATAACCCACTAAGGTAGGAGAAAGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS-3UTR CAA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTGCCGACATCATGGTGTaGATGGAAGATAGGTCTGAA +
Preference number: 5 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTAADIMV*MEDRSE
Trigger: TTCAGACCTATCTTCCATCAACACCATGATGTCGGC...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCTGCATCCCTGGGAAGTaGTTTGTGGACAAGCGCGTT +
Preference number: 5 (lower is better)
Translates to: YTEREEEAIKYILSVHVFCIPGK*FVDKRV
Trigger: AACGCGCTTGTCCACAAACAACTTCCCAGGGATGCA...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAATCGCCAGAGATGGGCTaGACCACAATGCTGCTGTCA +
Preference number: 5 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKSPEMG*TTMLLS
Trigger: TGACAGCAGCATTGTGGTCAAGCCCATCTCTGGCGA...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS CCA 90 bp TGCCAAGTGAATCGCACCTGGAAGTTGACTCCTTTTCAATTCCATTaGAATGGGATAGCCATAGAGTGCCACAACACCTATAACTGTAAA +
Preference number: 5 (lower is better)
Translates to: CQVNRTWKLTPFQFH*NGIAIECHNTYNCK
Trigger: TTTACAGTTATAGGTGTTGTGGCACTCTATGGCTATCCCATTCCAATGGAATTGAAAAGGAGTCAACTTCCAGGTGCGATTCACTTGGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS-3UTR CAA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCTGTGCATGTTCCCATaGGTGGTAAATGACTGGCCA +
Preference number: 5 (lower is better)
Translates to: YTEREEEAIKYILSVHVFLCMFP*VVNDWP
Trigger: TGGCCAGTCATTTACCACCAATGGGAACATGCACAG...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTATTTTCTTCCAGTTATaGGCTATGGGTACCCAAGGG +
Preference number: 5 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTAIFFQL*AMGTQG
Trigger: CCCTTGGGTACCCATAGCCAATAACTGGAAGAAAAT...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GAAGCTAGAATCTTCCCTGGTTTTGGCCTGAAACCATATTGGAAACCTTCATCAATTTTCTTCCAGTTATaGGCTATGGGTACCCAAGGG +
Preference number: 5 (lower is better)
Translates to: EARIFPGFGLKPYWKPSSIFFQL*AMGTQG
Trigger: CCCTTGGGTACCCATAGCCAATAACTGGAAGAAAAT...TGATGAAGGTTTCCAATATGGTTTCAGGCCAAAACCAGGGAAGATTCTAGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTTCTGTCTTTGGTTTCTaGTCATCGTCGCTCTTCTCT +
Preference number: 5 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTASVFGF*SSSLFS
Trigger: AGAGAAGAGCGACGATGACAAGAAACCAAAGACAGA...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS TCA 90 bp GTTTCTAAGGTGGTATCTGATCACAGAATAAAATATGAAGTGAGATaGAGTATACAGACGGGCTCAGAGACAGCCTGTATTCACTGCAGC +
Preference number: 5 (lower is better)
Translates to: VSKVVSDHRIKYEVR*SIQTGSETACIHCS
Trigger: GCTGCAGTGAATACAGGCTGTCTCTGAGCCCGTCTGTATACTTCATCTCACTTCATATTTTATTCTGTGATCAGATACCACCTTAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 90 bp CAACAAATGTCACATCTTAGTGGGTTATCTGAATGGGTCTCCATGTaGGTCTCCAGTCCATACTTGCAAACAAACTCCTTGAAACATACT +
Preference number: 5 (lower is better)
Translates to: QQMSHLSGLSEWVSM*VSSPYLQTNSLKHT
Trigger: AGTATGTTTCAAGGAGTTTGTTTGCAAGTATGGACTGGAGACCCACATGGAGACCCATTCAGATAACCCACTAAGATGTGACATTTGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS-3UTR CAA 90 bp AGGACAAATATTGCCCATTTGATTCTGCTCACTGCAGAGAACAGCAAACTGATGTTGACACTGTTTTCTTaGTGTTATCAAGCTGCCCTC +
Preference number: 5 (lower is better)
Translates to: RTNIAHLILLTAENSKLMLTLFS*CYQAAL
Trigger: GAGGGCAGCTTGATAACACAAAGAAAACAGTGTCAA...CATCAGTTTGCTGTTCTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAACTGTGCATGTTCCCATaGGTGGTAAATGACTGGCCA +
Preference number: 5 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKLCMFP*VVNDWP
Trigger: TGGCCAGTCATTTACCACCAATGGGAACATGCACAG...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTGTCTCCAGTCCATACTaGCAAACAAACTCCTTGAAA +
Preference number: 5 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTAVSSPY*QTNSLK
Trigger: TTTCAAGGAGTTTGTTTGCAAGTATGGACTGGAGAC...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
CDS-3UTR CAA 90 bp TATTGGAAACCTTCATCAACCACATCCTGTAATACCAAGGACCAGATGACAGCTACAAATATTGCCCATTaGATTCTGCTCACTGCAGAG +
Preference number: 5 (lower is better)
Translates to: YWKPSSTTSCNTKDQMTATNIAH*ILLTAE
Trigger: CTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGT...AGCTGTCATCTGGTCCTTGGTATTACAGGATGTGGTTGATGAAGGTTTCCAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS-3UTR CAA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAACACAGCCCTCTGGGTaGTTTTGTTTTCACAGCCAG +
Preference number: 5 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKTQPSG*FCFHSQ
Trigger: CTGGCTGTGAAAACAAAACAACCCAGAGGGCTGTGT...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000379938.7
CDS-3UTR CAA 90 bp ACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCCATCGTTCACAGTTAGATTaGGTAGAAAAGAAGGCATCG +
Preference number: 5 (lower is better)
Translates to: TEREEEAIKYILSVHVFHRSQLD*VEKKAS
Trigger: CGATGCCTTCTTTTCTACCAAATCTAACTGTGAACG...ATGGAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334984.10
ENST00000379938.7
CDS GCA 90 bp TTCTGTTACATAAAGGTGTCGAGTTCCTTCACGTTTCTAAATATCTaGTTTTCACACAGTGGGATTAAGAAACGTGGGAAGCAAGACTCA +
Preference number: 5 (lower is better)
Translates to: FCYIKVSSSFTFLNI*FSHSGIKKRGKQDS
Trigger: TGAGTCTTGCTTCCCACGTTTCTTAATCCCACTGTGTGAAAAGCAGATATTTAGAAACGTGAAGGAACTCGACACCTTTATGTAACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS-3UTR CAA 90 bp TATACTGAAAGGGAAGAGGAGGCAATCAAATATATCCTATCCGTGCATGTTTTCACAAATATTGCCCATTaGATTCTGCTCACTGCAGAG +
Preference number: 5 (lower is better)
Translates to: YTEREEEAIKYILSVHVFTNIAH*ILLTAE
Trigger: CTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGT...GAAAACATGCACGGATAGGATATATTTGATTGCCTCCTCTTCCCTTTCAGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS GCA 90 bp CCTGTTTGGGCCACATATTCATGCATTGCTAATAGTCATTTGAGTTaGAACATCTTTTGCGAAGAAAATCTATCTGTTGTCCAAGAACAC +
Preference number: 5 (lower is better)
Translates to: PVWATYSCIANSHLS*NIFCEENLSVVQEH
Trigger: GTGTTCTTGGACAACAGATAGATTTTCTTCGCAAAAGATGTTGCAACTCAAATGACTATTAGCAATGCATGAATATGTGGCCCAAACAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 90 bp GCTGGGATAGAAATGCAGTGTGATAAATATGTAAATATGTTGTTATaGTATGGACATTCTCTAGAGGGAGTAATGGTAAAGAGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: AGIEMQCDKYVNMLL*YGHSLEGVMVKRQP
Trigger: TGGCTGCCTCTTTACCATTACTCCCTCTAGAGAATGTCCATACCATAACAACATATTTACATATTTATCACACTGCATTTCTATCCCAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS-3UTR CAA 90 bp GATTCACAAGAACAAGCTCACACACACCAATACAAAATAACGCTAATGCTCAAAACAAATATTGCCCATTaGATTCTGCTCACTGCAGAG +
Preference number: 5 (lower is better)
Translates to: DSQEQAHTHQYKITLMLKTNIAH*ILLTAE
Trigger: CTCTGCAGTGAGCAGAATCAAATGGGCAATATTTGT...TTTGAGCATTAGCGTTATTTTGTATTGGTGTGTGTGAGCTTGTTCTTGTGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379938.7
ENST00000611109.1
CDS TCA 90 bp GTAAGTTCCTTTTTCCCTCACCAATGGAAAAATGTCAGGCTAATGTaGTTAAGGATAATCATATTTGACCTGGCATCAAGTTACTGTACA +
Preference number: 5 (lower is better)
Translates to: VSSFFPHQWKNVRLM*LRIIIFDLASSYCT
Trigger: TGTACAGTAACTTGATGCCAGGTCAAATATGATTATCCTTAATCACATTAGCCTGACATTTTTCCATTGGTGAGGGAAAAAGGAACTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS TCA 72 bp CGTGTTGCTCCTGCGAGTCTCCTGGGGACGTGTTACTaGGCGGCCGCGGCGGCGGCGGCGGCGGCGGCGGCG +
Preference number: 6 (lower is better)
Translates to: RVAPASLLGTCY*AAAAAAAAAAA
Trigger: CGCCGCCGCCGCCGCCGCCGCCGCCGCGGCCGCTCAGTAACACGTCCCCAGGAGACTCGCAGGAGCAACACG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379933.7
CDS GCA 72 bp ATCTCAGGCTGGCCCGGCAGCTCCGCCCGCGGCTGCTaGAGGGAGAGCCGCGTGGCCGCGTGGGGCTGGGTC +
Preference number: 6 (lower is better)
Translates to: ISGWPGSSARGC*RESRVAAWGWV
Trigger: GACCCAGCCCCACGCGGCCACGCGGCTCTCCCTGCAGCAGCCGCGGGCGGAGCTGCCGGGCCAGCCTGAGAT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CAA 72 bp GCGAACGCGGCGCTGCACTCCTTGCACTCGAAGGGCTaGCGGCCCTTGTGGCCCCCGCCCAGGCCGCGGCCG +
Preference number: 6 (lower is better)
Translates to: ANAALHSLHSKG*RPLWPPPRPRP
Trigger: CGGCCGCGGCCTGGGCGGGGGCCACAAGGGCCGCAAGCCCTTCGAGTGCAAGGAGTGCAGCGCCGCGTTCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS GCA 72 bp CTCTTCCCACAGGTGTCGCAGGCGAGCTTCTGCTCCTaGGAGGCCGCGCCCCCGGCGCCTGCCTCGCCGTCG +
Preference number: 6 (lower is better)
Translates to: LFPQVSQASFCS*EAAPPAPASPS
Trigger: CGACGGCGAGGCAGGCGCCGGGGGCGCGGCCTCGCAGGAGCAGAAGCTCGCCTGCGACACCTGTGGGAAGAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS GCA 72 bp CTCTTCCCACAGGTGTCGCAGGCGAGCTTCTGCTCCTaGGAGGCCGCGCCCCCGGCCCTGCCTCGCCGTCGC +
Preference number: 6 (lower is better)
Translates to: LFPQVSQASFCS*EAAPPALPRRR
Trigger: GCGACGGCGAGGCAGGGCCGGGGGCGCGGCCTCGCAGGAGCAGAAGCTCGCCTGCGACACCTGTGGGAAGAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611109.1
CDS GCA 72 bp CGTTTCCGCCGTGGCCTGCTCCACAGGCGCATCCCCTaGGACCTGGCGGAGCTCAGTGGCGCCCTCCGACGG +
Preference number: 6 (lower is better)
Translates to: RFRRGLLHRRIP*DLAELSGALRR
Trigger: CCGTCGGAGGGCGCCACTGAGCTCCGCCAGGTCGCAGGGGATGCGCCTGTGGAGCAGGCCACGGCGGAAACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 72 bp GGCTGCTGCAGGGAGAGCCGCGTGGCCGCGTGGGGCTaGGTCCCGGACTTGGACTGCAGCAGGTGGGCGTTG +
Preference number: 6 (lower is better)
Translates to: GCCRESRVAAWG*VPDLDCSRWAL
Trigger: CAACGCCCACCTGCTGCAGTCCAAGTCCGGGACCCAGCCCCACGCGGCCACGCGGCTCTCCCTGCAGCAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CCA 72 bp GCCGTGGCCTGCTCCACAGGCGCATCCCCTGCGACCTaGCGGAGCTCAGTGGCGCCCTCCGACGGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: AVACSTGASPAT*RSSVAPSDGCS
Trigger: AGAGCAGCCGTCGGAGGGCGCCACTGAGCTCCGCCAGGTCGCAGGGGATGCGCCTGTGGAGCAGGCCACGGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 72 bp GCTCTTCCCGGTGCACCGGCGAGGCCGTTTCCGCCGTaGCCTGCTCCACAGGCGCATCCCCTGCGACCTGGC +
Preference number: 6 (lower is better)
Translates to: ALPGAPARPFPP*PAPQAHPLRPG
Trigger: GCCAGGTCGCAGGGGATGCGCCTGTGGAGCAGGCCACGGCGGAAACGGCCTCGCCGGTGCACCGGGAAGAGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 90 bp TGGGAGGCGCCATCAGCTGTGGCCAGGATTGGGTGGGCAGGCCTCTaGCTGCGCGGCTCCAGCAGGTCCTGCCCCAGGGCCGCCGGGCTC +
Preference number: 6 (lower is better)
Translates to: WEAPSAVARIGWAGL*LRGSSRSCPRAAGL
Trigger: GAGCCCGGCGGCCCTGGGGCAGGACCTGCTGGAGCCGCGCAGCAAGAGGCCTGCCCACCCAATCCTGGCCACAGCTGATGGCGCCTCCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 72 bp GCGCCGTCGGCGTCCCCAGTGCTCTCCTCAGTGCCATaGTCCTCCTCCGGCTCATGGCTCTCCCCACGCCCG +
Preference number: 6 (lower is better)
Translates to: APSASPVLSSVP*SSSGSWLSPRP
Trigger: CGGGCGTGGGGAGAGCCATGAGCCGGAGGAGGAGCATGGCACTGAGGAGAGCACTGGGGACGCCGACGGCGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS GCA 72 bp CCGCCGTCGGCGTCCCCAGTGCTCTCCTCAGTGCCATaGTCCTCCTCCGGCTCATGGCTCTCCCCACGCCCG +
Preference number: 6 (lower is better)
Translates to: PPSASPVLSSVP*SSSGSWLSPRP
Trigger: CGGGCGTGGGGAGAGCCATGAGCCGGAGGAGGAGCATGGCACTGAGGAGAGCACTGGGGACGCCGACGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000611109.1
CDS CCA 72 bp CCACAGGCGCATCCCCTGCGACCTGGCGGAGCTCAGTaGCGCCCTCCGACGGCTGCTCTCTGTCCCGTGAGG +
Preference number: 6 (lower is better)
Translates to: PQAHPLRPGGAQ*RPPTAALCPVR
Trigger: CCTCACGGGACAGAGAGCAGCCGTCGGAGGGCGCCACTGAGCTCCGCCAGGTCGCAGGGGATGCGCCTGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 72 bp GTGCTGGCGCCATCTCCCTTCTCGTCCTTGGGCTCCTaGCGGCCGTGCGCCTTCCGGTGGCGGCTCAGGGTG +
Preference number: 6 (lower is better)
Translates to: VLAPSPFSSLGS*RPCAFRWRLRV
Trigger: CACCCTGAGCCGCCACCGGAAGGCGCACGGCCGCCAGGAGCCCAAGGACGAGAAGGGAGATGGCGCCAGCAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 72 bp AGTTGCGCTTGGCCGCGAACGCGGCGCTGCACTCCTTaGACTCGAAGGGCTTGCGGCCCTTGTGGCCCCCGC +
Preference number: 6 (lower is better)
Translates to: SCAWPRTRRCTP*TRRACGPCGPR
Trigger: GCGGGGGCCACAAGGGCCGCAAGCCCTTCGAGTGCAAGGAGTGCAGCGCCGCGTTCGCGGCCAAGCGCAACT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS GCA 72 bp CCATCTCCCTTCTCGTCCTTGGGCTCCTGGCGGCCGTaGGCCTTCCGGTGGCGGCTCAGGGTGCCCAGGAAC +
Preference number: 6 (lower is better)
Translates to: PSPFSSLGSWRP*AFRWRLRVPRN
Trigger: GTTCCTGGGCACCCTGAGCCGCCACCGGAAGGCGCACGGCCGCCAGGAGCCCAAGGACGAGAAGGGAGATGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 72 bp GCCCCCGGCCCTGCCTCGCCGTCGCCCTCCGCCAGCTaGAAGTCCATGAGCTTGGTGGCGAAGTCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: APGPASPSPSAS*KSMSLVAKSRS
Trigger: GGACCTGGACTTCGCCACCAAGCTCATGGACTTCAAGCTGGCGGAGGGCGACGGCGAGGCAGGGCCGGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000611109.1
CDS CAA 90 bp GACGGCCACCCTGCCGTGACCTTCTCCTCCCTGTGGCTGCAGTCCTaGGTGGCACTGGCCAAGCCCTCCTTCCGGCTCCGGGTGACAGCC +
Preference number: 6 (lower is better)
Translates to: DGHPAVTFSSLWLQS*VALAKPSFRLRVTA
Trigger: GGCTGTCACCCGGAGCCGGAAGGAGGGCTTGGCCAGTGCCACCAAGGACTGCAGCCACAGGGAGGAGAAGGTCACGGCAGGGTGGCCGTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 90 bp ACTCCATCCCCACGAGCTGGGAGGCGCCATCAGCTGTGGCCAGGATaGGGTGGGCAGGCCTCTTGCTGCGCGGCTCCAGCAGGTCCTGCC +
Preference number: 6 (lower is better)
Translates to: TPSPRAGRRHQLWPG*GGQASCCAAPAGPA
Trigger: GGCAGGACCTGCTGGAGCCGCGCAGCAAGAGGCCTGCCCACCCAATCCTGGCCACAGCTGATGGCGCCTCCCAGCTCGTGGGGATGGAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS TCA 72 bp TGGCGCCCTCCGACGGCTGCTCTCTGTCCCGTGAGGTaGGGTCTAGCACTTCGCCCGCGGCGGCTGCAGTCT +
Preference number: 6 (lower is better)
Translates to: WRPPTAALCPVR*GLALRPRRLQS
Trigger: AGACTGCAGCCGCCGCGGGCGAAGTGCTAGACCTCACCTCACGGGACAGAGAGCAGCCGTCGGAGGGCGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 72 bp GCGTGGGGCTGGGTCCCGGACTTGGACTGCAGCAGGTaGGCGTTGGAGGCCGCCTCCACTGAGCCTTTGAGG +
Preference number: 6 (lower is better)
Translates to: AWGWVPDLDCSR*ALEAASTEPLR
Trigger: CCTCAAAGGCTCAGTGGAGGCGGCCTCCAACGCCCACCTGCTGCAGTCCAAGTCCGGGACCCAGCCCCACGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CCA 72 bp AGCTGGGAGGCGCCATCAGCTGTGGCCAGGATTGGGTaGGCAGGCCTCTTGCTGCGCGGCTCCAGCAGGTCC +
Preference number: 6 (lower is better)
Translates to: SWEAPSAVARIG*AGLLLRGSSRS
Trigger: GGACCTGCTGGAGCCGCGCAGCAAGAGGCCTGCCCACCCAATCCTGGCCACAGCTGATGGCGCCTCCCAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 90 bp GCGCCTGCCTCGCCGTCGCCCTCCGCCAGCTTGAAGTCCATGAGCTaGGTGGCGAAGTCCAGGTCCAGGCTCTGGTTGCTCGACGCGTCC +
Preference number: 6 (lower is better)
Translates to: APASPSPSASLKSMS*VAKSRSRLWLLDAS
Trigger: GGACGCGTCGAGCAACCAGAGCCTGGACCTGGACTTCGCCACCAAGCTCATGGACTTCAAGCTGGCGGAGGGCGACGGCGAGGCAGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS CAA 90 bp GGCCCTGCCTCGCCGTCGCCCTCCGCCAGCTTGAAGTCCATGAGCTaGGTGGCGAAGTCCAGGTCCAGGCTCTGGTTGCTCGACGCGTCC +
Preference number: 6 (lower is better)
Translates to: GPASPSPSASLKSMS*VAKSRSRLWLLDAS
Trigger: GGACGCGTCGAGCAACCAGAGCCTGGACCTGGACTTCGCCACCAAGCTCATGGACTTCAAGCTGGCGGAGGGCGACGGCGAGGCAGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611109.1
CDS TCA 72 bp GCGTGCGCATGTGGATGCGCAGGGCACGATAGTGCTTaGGGTCCTCGCCGCACAGCCGGCACACGGTGTCCG +
Preference number: 6 (lower is better)
Translates to: ACACGCAGHDSA*GPRRTAGTRCP
Trigger: CGGACACCGTGTGCCGGCTGTGCGGCGAGGACCTCAAGCACTATCGTGCCCTGCGCATCCACATGCGCACGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 72 bp GGCAGCAGGGCCTCGATGATGCTGTCCTGCTCCAGCTaGGTCTTCATCTCAGGCTGGCCCGGCAGCTCCGCC +
Preference number: 6 (lower is better)
Translates to: GSRASMMLSCSS*VFISGWPGSSA
Trigger: GGCGGAGCTGCCGGGCCAGCCTGAGATGAAGACGCAGCTGGAGCAGGACAGCATCATCGAGGCCCTGCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 72 bp ACACCTGGTTGCAGAAGCGGCAGGGGTAGAGCACCTTaGGCATGGCGGGCGTCTTCTTGCCGCCGGGCGCTG +
Preference number: 6 (lower is better)
Translates to: TPGCRSGRGRAP*AWRASSCRRAL
Trigger: CAGCGCCCGGCGGCAAGAAGACGCCCGCCATGCGCAAGGTGCTCTACCCCTGCCGCTTCTGCAACCAGGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 72 bp GCGACCTGGCGGAGCTCAGTGGCGCCCTCCGACGGCTaGTCTCTGTCCCGTGAGGTGAGGTCTAGCACTTCG +
Preference number: 6 (lower is better)
Translates to: ATWRSSVAPSDG*SLSREVRSSTS
Trigger: CGAAGTGCTAGACCTCACCTCACGGGACAGAGAGCAGCCGTCGGAGGGCGCCACTGAGCTCCGCCAGGTCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 72 bp TCGACGCGTCCTCTTCCGCGCCGTCGGCGTCCCCAGTaGTCTCCTCAGTGCCATGCTCCTCCTCCGGCTCAT +
Preference number: 6 (lower is better)
Translates to: STRPLPRRRRPQ*SPQCHAPPPAH
Trigger: ATGAGCCGGAGGAGGAGCATGGCACTGAGGAGAGCACTGGGGACGCCGACGGCGCGGAAGAGGACGCGTCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS GCA 72 bp GCTCGACGCGTCCTCTTCCGCCGTCGGCGTCCCCAGTaGTCTCCTCAGTGCCATGCTCCTCCTCCGGCTCAT +
Preference number: 6 (lower is better)
Translates to: ARRVLFRRRRPQ*SPQCHAPPPAH
Trigger: ATGAGCCGGAGGAGGAGCATGGCACTGAGGAGAGCACTGGGGACGCCGACGGCGGAAGAGGACGCGTCGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611109.1
CDS CCA 72 bp AGCCCTTCTGGTCCAGGGCGTCACCAGGCAGGGGCGTaGCCTGCGGCTTTTCTTGACCCTGGTCTGCCGCCA +
Preference number: 6 (lower is better)
Translates to: SPSGPGRHQAGA*PAAFLDPGLPP
Trigger: TGGCGGCAGACCAGGGTCAAGAAAAGCCGCAGGCCACGCCCCTGCCTGGTGACGCCCTGGACCAGAAGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CCA 72 bp TGGCCAGCATCTTCTCGATGCTGGCAAACTCCCCGCTaGAGTCCAGGTCCACCCCGCCGCTGTTGGCGCGGG +
Preference number: 6 (lower is better)
Translates to: WPASSRCWQTPR*SPGPPRRCWRG
Trigger: CCCGCGCCAACAGCGGCGGGGTGGACCTGGACTCCAGCGGGGAGTTTGCCAGCATCGAGAAGATGCTGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 72 bp AGTCGGAGCAACGGCCGGGCAGGACGCTTGGCTCCCTaGCATGATGCGTTGGGGACCGGTGGGCTTCAGGGA +
Preference number: 6 (lower is better)
Translates to: SRSNGRAGRLAP*HDALGTGGLQG
Trigger: TCCCTGAAGCCCACCGGTCCCCAACGCATCATGCCAGGGAGCCAAGCGTCCTGCCCGGCCGTTGCTCCGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379938.7
ENST00000491191.5
CDS CCA 72 bp GAACACACAGTCGGAGCAACGGCCGGGCAGGACGCTTaGCTCCCTGGCATGATGCGTTGGGGACCGGTGGGC +
Preference number: 6 (lower is better)
Translates to: EHTVGATAGQDA*LPGMMRWGPVG
Trigger: GCCCACCGGTCCCCAACGCATCATGCCAGGGAGCCAAGCGTCCTGCCCGGCCGTTGCTCCGACTGTGTGTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379938.7
ENST00000491191.5
CDS CCA 72 bp CAGAGCTGCCAGGCGGCAGGCTGGGACGGAGCCGGCTaGCTTCGTTCCACTCTGCCAGGCTGTGCGTTCAGA +
Preference number: 6 (lower is better)
Translates to: QSCQAAGWDGAG*LRSTLPGCAFR
Trigger: TCTGAACGCACAGCCTGGCAGAGTGGAACGAAGCCAGCCGGCTCCGTCCCAGCCTGCCGCCTGGCAGCTCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 72 bp ACTTGCCCGAGGTCACAGAGCTGCCAGGCGGCAGGCTaGGACGGAGCCGGCTGGCTTCGTTCCACTCTGCCA +
Preference number: 6 (lower is better)
Translates to: TCPRSQSCQAAG*DGAGWLRSTLP
Trigger: TGGCAGAGTGGAACGAAGCCAGCCGGCTCCGTCCCAGCCTGCCGCCTGGCAGCTCTGTGACCTCGGGCAAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 72 bp GGAACACACAGTCGGAGCAACGGCCGGGCAGGACGCTaGGCTCCCTGGCATGATGCGTTGGGGACCGGTGGG +
Preference number: 6 (lower is better)
Translates to: GTHSRSNGRAGR*APWHDALGTGG
Trigger: CCCACCGGTCCCCAACGCATCATGCCAGGGAGCCAAGCGTCCTGCCCGGCCGTTGCTCCGACTGTGTGTTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379938.7
ENST00000491191.5
CDS CAA 90 bp CTGGTCCAGGGCGTCACCAGGCAGGGGCGTGGCCTGCGGCTTTTCTaGACCCTGGTCTGCCGCCACATGGGTCTGCTTGTGCAGAGCCAG +
Preference number: 6 (lower is better)
Translates to: LVQGVTRQGRGLRLF*TLVCRHMGLLVQSQ
Trigger: CTGGCTCTGCACAAGCAGACCCATGTGGCGGCAGACCAGGGTCAAGAAAAGCCGCAGGCCACGCCCCTGCCTGGTGACGCCCTGGACCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CAA 90 bp TTGTCATCCGGCAGGGGCTCCTCGGCGGGGGCAGGCCTGACGTCTTaGGTGTGCTGCAGGCCAAGCAAGGCCAGGAAGCCCTTCTGGTCC +
Preference number: 6 (lower is better)
Translates to: LSSGRGSSAGAGLTS*VCCRPSKARKPFWS
Trigger: GGACCAGAAGGGCTTCCTGGCCTTGCTTGGCCTGCAGCACACCAAAGACGTCAGGCCTGCCCCCGCCGAGGAGCCCCTGCCGGATGACAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS TCA 72 bp GCGTCACCAGGCAGGGGCGTGGCCTGCGGCTTTTCTTaGCCCTGGTCTGCCGCCACATGGGTCTGCTTGTGC +
Preference number: 6 (lower is better)
Translates to: ASPGRGVACGFS*PWSAATWVCLC
Trigger: GCACAAGCAGACCCATGTGGCGGCAGACCAGGGTCAAGAAAAGCCGCAGGCCACGCCCCTGCCTGGTGACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 72 bp TCCTCGGCGGGGGCAGGCCTGACGTCTTTGGTGTGCTaGAGGCCAAGCAAGGCCAGGAAGCCCTTCTGGTCC +
Preference number: 6 (lower is better)
Translates to: SSAGAGLTSLVC*RPSKARKPFWS
Trigger: GGACCAGAAGGGCTTCCTGGCCTTGCTTGGCCTGCAGCACACCAAAGACGTCAGGCCTGCCCCCGCCGAGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 72 bp GGTGGATGCAGTTGCGCTTGGCCGCGAACGCGGCGCTaGACTCCTTGCACTCGAAGGGCTTGCGGCCCTTGT +
Preference number: 6 (lower is better)
Translates to: GGCSCAWPRTRR*TPCTRRACGPC
Trigger: ACAAGGGCCGCAAGCCCTTCGAGTGCAAGGAGTGCAGCGCCGCGTTCGCGGCCAAGCGCAACTGCATCCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS GCA 72 bp GGAAACCAAGTCAGCACTTGCCCGAGGTCACAGAGCTaGCAGGCGGCAGGCTGGGACGGAGCCGGCTGGCTT +
Preference number: 6 (lower is better)
Translates to: GNQVSTCPRSQS*QAAGWDGAGWL
Trigger: AAGCCAGCCGGCTCCGTCCCAGCCTGCCGCCTGGCAGCTCTGTGACCTCGGGCAAGTGCTGACTTGGTTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 72 bp TGCTCGGGCACGTGCAGGTGCTGCTTGAGGATGTGGTaGATGCAGTTGCGCTTGGCCGCGAACGCGGCGCTG +
Preference number: 6 (lower is better)
Translates to: CSGTCRCCLRMW*MQLRLAANAAL
Trigger: CAGCGCCGCGTTCGCGGCCAAGCGCAACTGCATCCACCACATCCTCAAGCAGCACCTGCACGTGCCCGAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS CCA 72 bp TCCTGCTCGGGCACGTGCAGGTGCTGCTTGAGGATGTaGTGGATGCAGTTGCGCTTGGCCGCGAACGCGGCG +
Preference number: 6 (lower is better)
Translates to: SCSGTCRCCLRM*WMQLRLAANAA
Trigger: CGCCGCGTTCGCGGCCAAGCGCAACTGCATCCACCACATCCTCAAGCAGCACCTGCACGTGCCCGAGCAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS CCA 72 bp TCCATGAGCTTGGTGGCGAAGTCCAGGTCCAGGCTCTaGTTGCTCGACGCGTCCTCTTCCGCGCCGTCGGCG +
Preference number: 6 (lower is better)
Translates to: SMSLVAKSRSRL*LLDASSSAPSA
Trigger: CGCCGACGGCGCGGAAGAGGACGCGTCGAGCAACCAGAGCCTGGACCTGGACTTCGCCACCAAGCTCATGGA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS CCA 72 bp GGAGCAACTTACGGCCGGGCAGGACGCTTGGCTCCCTaGCATGATGCGTTGGGGACCGGTGGGCTTCAGGGA +
Preference number: 6 (lower is better)
Translates to: GATYGRAGRLAP*HDALGTGGLQG
Trigger: TCCCTGAAGCCCACCGGTCCCCAACGCATCATGCCAGGGAGCCAAGCGTCCTGCCCGGCCGTAAGTTGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471433.5
CDS CCA 72 bp ACACAGTCGGAGCAACTTACGGCCGGGCAGGACGCTTaGCTCCCTGGCATGATGCGTTGGGGACCGGTGGGC +
Preference number: 6 (lower is better)
Translates to: TQSEQLTAGQDA*LPGMMRWGPVG
Trigger: GCCCACCGGTCCCCAACGCATCATGCCAGGGAGCCAAGCGTCCTGCCCGGCCGTAAGTTGCTCCGACTGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471433.5
CDS CCA 72 bp ACTCTCTTCTTACGGGCCACCCCTCAGCCACAGCTGTaGGGCCAGCGAAGTGAGAGCCTGCCCAGAGGGGCC +
Preference number: 6 (lower is better)
Translates to: TLFLRATPQPQL*GQRSESLPRGA
Trigger: GGCCCCTCTGGGCAGGCTCTCACTTCGCTGGCCCCACAGCTGTGGCTGAGGGGTGGCCCGTAAGAAGAGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 72 bp GGCGTCACCAGGCAGGGGCGTGGCCTGCGGCTTTTCTaGACCCTGGTCTGCCGCCACATGGGTCTGCTTGTG +
Preference number: 6 (lower is better)
Translates to: GVTRQGRGLRLF*TLVCRHMGLLV
Trigger: CACAAGCAGACCCATGTGGCGGCAGACCAGGGTCAAGAAAAGCCGCAGGCCACGCCCCTGCCTGGTGACGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CAA 72 bp ATGAGCTTGGTGGCGAAGTCCAGGTCCAGGCTCTGGTaGCTCGACGCGTCCTCTTCCGCGCCGTCGGCGTCC +
Preference number: 6 (lower is better)
Translates to: MSLVAKSRSRLW*LDASSSAPSAS
Trigger: GGACGCCGACGGCGCGGAAGAGGACGCGTCGAGCAACCAGAGCCTGGACCTGGACTTCGCCACCAAGCTCAT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS CAA 72 bp CACACAGTCGGAGCAACTTACGGCCGGGCAGGACGCTaGGCTCCCTGGCATGATGCGTTGGGGACCGGTGGG +
Preference number: 6 (lower is better)
Translates to: HTVGATYGRAGR*APWHDALGTGG
Trigger: CCCACCGGTCCCCAACGCATCATGCCAGGGAGCCAAGCGTCCTGCCCGGCCGTAAGTTGCTCCGACTGTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471433.5
CDS CAA 72 bp ATGAGCTTGGTGGCGAAGTCCAGGTCCAGGCTCTGGTaGCTCGACGCGTCCTCTTCCGCCGTCGGCGTCCCC +
Preference number: 6 (lower is better)
Translates to: MSLVAKSRSRLW*LDASSSAVGVP
Trigger: GGGGACGCCGACGGCGGAAGAGGACGCGTCGAGCAACCAGAGCCTGGACCTGGACTTCGCCACCAAGCTCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611109.1
CDS TCA 72 bp TGGTGGCACTGGCCAAGCCCTCCTTCCGGCTCCGGGTaGCAGCCATGTGGTTGCTGGCATTGGGAGCCAGCT +
Preference number: 6 (lower is better)
Translates to: WWHWPSPPSGSG*QPCGCWHWEPA
Trigger: AGCTGGCTCCCAATGCCAGCAACCACATGGCTGTCACCCGGAGCCGGAAGGAGGGCTTGGCCAGTGCCACCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 72 bp ATGCTCAGCGGCAGCAGGGCCTCGATGATGCTGTCCTaGTCCAGCTGCGTCTTCATCTCAGGCTGGCCCGGC +
Preference number: 6 (lower is better)
Translates to: MLSGSRASMMLS*SSCVFISGWPG
Trigger: GCCGGGCCAGCCTGAGATGAAGACGCAGCTGGAGCAGGACAGCATCATCGAGGCCCTGCTGCCGCTGAGCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 72 bp GCGCGGCCTTGTCGGCGGCGATGTAGTCGCAGATGTTaGACTGGTATGGCGAGATGCCCAGGTGGGAGCGCA +
Preference number: 6 (lower is better)
Translates to: ARPCRRRCSRRC*TGMARCPGGSA
Trigger: TGCGCTCCCACCTGGGCATCTCGCCATACCAGTGCAACATCTGCGACTACATCGCCGCCGACAAGGCCGCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 72 bp TCCCCTGTGTGGGAGCGCATGTGCCGGGTCAGGTCCTaGAGCGACCAGAACCGCTTGTTGCACACGCTGCAG +
Preference number: 6 (lower is better)
Translates to: SPVWERMCRVRS*SDQNRLLHTLQ
Trigger: CTGCAGCGTGTGCAACAAGCGGTTCTGGTCGCTGCAGGACCTGACCCGGCACATGCGCTCCCACACAGGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 72 bp GTCGGCGGCGATGTAGTCGCAGATGTTGCACTGGTATaGCGAGATGCCCAGGTGGGAGCGCACGTGGGCACG +
Preference number: 6 (lower is better)
Translates to: VGGDVVADVALV*RDAQVGAHVGT
Trigger: CGTGCCCACGTGCGCTCCCACCTGGGCATCTCGCCATACCAGTGCAACATCTGCGACTACATCGCCGCCGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CCA 72 bp GCCAAGCCCTCCTTCCGGCTCCGGGTGACAGCCATGTaGTTGCTGGCATTGGGAGCCAGCTCAGCCTCGTTC +
Preference number: 6 (lower is better)
Translates to: AKPSFRLRVTAM*LLALGASSASF
Trigger: GAACGAGGCTGAGCTGGCTCCCAATGCCAGCAACCACATGGCTGTCACCCGGAGCCGGAAGGAGGGCTTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 72 bp TCCATGAGCTTGGTGGCGAAGTCCAGGTCCAGGCTCTaGTTGCTCGACGCGTCCTCTTCCGCCGTCGGCGTC +
Preference number: 6 (lower is better)
Translates to: SMSLVAKSRSRL*LLDASSSAVGV
Trigger: GACGCCGACGGCGGAAGAGGACGCGTCGAGCAACCAGAGCCTGGACCTGGACTTCGCCACCAAGCTCATGGA
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611109.1
CDS CAA 90 bp GGCACGTGCAGGTGCTGCTTGAGGATGTGGTGGATGCAGTTGCGCTaGGCCGCGAACGCGGCGCTGCACTCCTTGCACTCGAAGGGCTTG +
Preference number: 6 (lower is better)
Translates to: GTCRCCLRMWWMQLR*AANAALHSLHSKGL
Trigger: CAAGCCCTTCGAGTGCAAGGAGTGCAGCGCCGCGTTCGCGGCCAAGCGCAACTGCATCCACCACATCCTCAAGCAGCACCTGCACGTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS CAA 90 bp TGCTCGGGCACGTGCAGGTGCTGCTTGAGGATGTGGTGGATGCAGTaGCGCTTGGCCGCGAACGCGGCGCTGCACTCCTTGCACTCGAAG +
Preference number: 6 (lower is better)
Translates to: CSGTCRCCLRMWWMQ*RLAANAALHSLHSK
Trigger: CTTCGAGTGCAAGGAGTGCAGCGCCGCGTTCGCGGCCAAGCGCAACTGCATCCACCACATCCTCAAGCAGCACCTGCACGTGCCCGAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS CAA 90 bp TTGAAGTCCATGAGCTTGGTGGCGAAGTCCAGGTCCAGGCTCTGGTaGCTCGACGCGTCCTCTTCCGCGCCGTCGGCGTCCCCAGTGCTC +
Preference number: 6 (lower is better)
Translates to: LKSMSLVAKSRSRLW*LDASSSAPSASPVL
Trigger: GAGCACTGGGGACGCCGACGGCGCGGAAGAGGACGCGTCGAGCAACCAGAGCCTGGACCTGGACTTCGCCACCAAGCTCATGGACTTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS TCA 72 bp GCTGCACTAATCTCTCCCAGTTGCTGCGAGCAACAGTaGTGGCCCTGTGACAGGGCCCTGGCCAGGCAGCCG +
Preference number: 6 (lower is better)
Translates to: AALISPSCCEQQ*WPCDRALARQP
Trigger: CGGCTGCCTGGCCAGGGCCCTGTCACAGGGCCATCACTGTTGCTCGCAGCAACTGGGAGAGATTAGTGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 72 bp GGGCACGCAAGACCCCCGAGAAGGCAAACACCTGGTTaGAGAAGCGGCAGGGGTAGAGCACCTTGCGCATGG +
Preference number: 6 (lower is better)
Translates to: GHARPPRRQTPG*RSGRGRAPCAW
Trigger: CCATGCGCAAGGTGCTCTACCCCTGCCGCTTCTGCAACCAGGTGTTTGCCTTCTCGGGGGTCTTGCGTGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 72 bp TCCGCTTGGCCCTCAGCAGCTTGTCTTCTGGGGGACTaGCCTGCTCTTCATCACTGGGCCCATGGTGGTCGG +
Preference number: 6 (lower is better)
Translates to: SAWPSAACLLGD*PALHHWAHGGR
Trigger: CCGACCACCATGGGCCCAGTGATGAAGAGCAGGGCAGTCCCCCAGAAGACAAGCTGCTGAGGGCCAAGCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 72 bp CCCAGGAACCCGCCCAGGCTGCACACAGCAACCCAATaGCCCGCTCTGACTGTTCAACCAAACCAGCGTGGC +
Preference number: 6 (lower is better)
Translates to: PRNPPRLHTATQ*PALTVQPNQRG
Trigger: GCCACGCTGGTTTGGTTGAACAGTCAGAGCGGGGCATTGGGTTGCTGTGTGCAGCCTGGGCGGGTTCCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 72 bp CTTCAGAGGGGGCATGTGCTTGAAGATCGCCTGCAGTaGGGCGGCAGGGGCCTTGGAGAAGGGCGGAAGACT +
Preference number: 6 (lower is better)
Translates to: LQRGHVLEDRLQ*GGRGLGEGRKT
Trigger: AGTCTTCCGCCCTTCTCCAAGGCCCCTGCCGCCCCACTGCAGGCGATCTTCAAGCACATGCCCCCTCTGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CCA 72 bp TCGCAGATGTTGCACTGGTATGGCGAGATGCCCAGGTaGGAGCGCACGTGGGCACGCAAGACCCCCGAGAAG +
Preference number: 6 (lower is better)
Translates to: SQMLHWYGEMPR*ERTWARKTPEK
Trigger: CTTCTCGGGGGTCTTGCGTGCCCACGTGCGCTCCCACCTGGGCATCTCGCCATACCAGTGCAACATCTGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CCA 72 bp TACTGCCAGTGCTTGCGGGCCCTGGGTCCGCCACCTTaGTTTTCAGCAGGGTGGGGGCCGAGGATACAGATG +
Preference number: 6 (lower is better)
Translates to: YCQCLRALGPPP*FSAGWGPRIQM
Trigger: CATCTGTATCCTCGGCCCCCACCCTGCTGAAAACCAAGGTGGCGGACCCAGGGCCCGCAAGCACTGGCAGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 72 bp CAGGAAGGGGGTGGTCTCAGCTGCCCTCACTACTCATaGAGCCGAGGTTCCTGTCAGAGCCCCCTTGGGCTC +
Preference number: 6 (lower is better)
Translates to: QEGGGLSCPHYS*SRGSCQSPLGL
Trigger: GAGCCCAAGGGGGCTCTGACAGGAACCTCGGCTCCATGAGTAGTGAGGGCAGCTGAGACCACCCCCTTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 72 bp AGGTGCTGCTTGAGGATGTGGTGGATGCAGTTGCGCTaGGCCGCGAACGCGGCGCTGCACTCCTTGCACTCG +
Preference number: 6 (lower is better)
Translates to: RCCLRMWWMQLR*AANAALHSLHS
Trigger: CGAGTGCAAGGAGTGCAGCGCCGCGTTCGCGGCCAAGCGCAACTGCATCCACCACATCCTCAAGCAGCACCT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS CAA 72 bp ACGTGCAGGTGCTGCTTGAGGATGTGGTGGATGCAGTaGCGCTTGGCCGCGAACGCGGCGCTGCACTCCTTG +
Preference number: 6 (lower is better)
Translates to: TCRCCLRMWWMQ*RLAANAALHSL
Trigger: CAAGGAGTGCAGCGCCGCGTTCGCGGCCAAGCGCAACTGCATCCACCACATCCTCAAGCAGCACCTGCACGT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS CAA 72 bp AAGCCGTTCTGGGGTTCCAGGAAGGCAGTGAGGGGCTaGCAGTCACCAAGGGCAGCGCAGCCACTGTCCTCC +
Preference number: 6 (lower is better)
Translates to: KPFWGSRKAVRG*QSPRAAQPLSS
Trigger: GGAGGACAGTGGCTGCGCTGCCCTTGGTGACTGCAAGCCCCTCACTGCCTTCCTGGAACCCCAGAACGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
CDS CAA 90 bp CAGGGAGAGGGCTGCTCGCTGCTCCCCGCCTCCTCCTCAGGCTTCTaGGCTTCGCTGGGAGTGGCCAAATCCTTGTCCCCTTTCCTGAAG +
Preference number: 6 (lower is better)
Translates to: QGEGCSLLPASSSGF*ASLGVAKSLSPFLK
Trigger: CTTCAGGAAAGGGGACAAGGATTTGGCCACTCCCAGCGAAGCCAAGAAGCCTGAGGAGGAGGCGGGGAGCAGCGAGCAGCCCTCTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 90 bp CTGGCATTGGGAGCCAGCTCAGCCTCGTTCTCTGAGACGGCGTTGTaGCCGCTGTGGGTGGACTCATTCTCGCTGTCCTCCTCACCCCGC +
Preference number: 6 (lower is better)
Translates to: LALGASSASFSETAL*PLWVDSFSLSSSPR
Trigger: GCGGGGTGAGGAGGACAGCGAGAATGAGTCCACCCACAGCGGCAACAACGCCGTCTCAGAGAACGAGGCTGAGCTGGCTCCCAATGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 90 bp TTGAAGTCCATGAGCTTGGTGGCGAAGTCCAGGTCCAGGCTCTGGTaGCTCGACGCGTCCTCTTCCGCCGTCGGCGTCCCCAGTGCTCTC +
Preference number: 6 (lower is better)
Translates to: LKSMSLVAKSRSRLW*LDASSSAVGVPSAL
Trigger: GAGAGCACTGGGGACGCCGACGGCGGAAGAGGACGCGTCGAGCAACCAGAGCCTGGACCTGGACTTCGCCACCAAGCTCATGGACTTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611109.1
CDS CAA 90 bp CGCATGGCGGGCGTCTTCTTGCCGCCGGGCGCTGTCATGAAGGCCTaGAGTTCCCCCTCTGTGATCTCCTGCTTGATCTTGGCCTCCATG +
Preference number: 6 (lower is better)
Translates to: RMAGVFLPPGAVMKA*SSPSVISCLILASM
Trigger: CATGGAGGCCAAGATCAAGCAGGAGATCACAGAGGGGGAACTCAAGGCCTTCATGACAGCGCCCGGCGGCAAGAAGACGCCCGCCATGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CAA 90 bp GCCGTGGTGTTACTGCCAGTGCTTGCGGGCCCTGGGTCCGCCACCTaGGTTTTCAGCAGGGTGGGGGCCGAGGATACAGATGAGATGATC +
Preference number: 6 (lower is better)
Translates to: AVVLLPVLAGPGSAT*VFSRVGAEDTDEMI
Trigger: GATCATCTCATCTGTATCCTCGGCCCCCACCCTGCTGAAAACCAAGGTGGCGGACCCAGGGCCCGCAAGCACTGGCAGTAACACCACGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 90 bp CAGAACCTCCTAAGCTGTCTGAAGCCGTGGTGTTACTGCCAGTGCTaGCGGGCCCTGGGTCCGCCACCTTGGTTTTCAGCAGGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: QNLLSCLKPWCYCQC*RALGPPPWFSAGWG
Trigger: CCCCCACCCTGCTGAAAACCAAGGTGGCGGACCCAGGGCCCGCAAGCACTGGCAGTAACACCACGGCTTCAGACAGCTTAGGAGGTTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 90 bp TCCTCCTCACCCCGCTCTTCCTTGTCGCTGTCCTTCCCGTGGTGTTaGGCATGCCTGGCTTTCTGGTGGATCCGCTGGTGGCGAACCAGG +
Preference number: 6 (lower is better)
Translates to: SSSPRSSLSLSFPWC*ACLAFWWIRWWRTR
Trigger: CCTGGTTCGCCACCAGCGGATCCACCAGAAAGCCAGGCATGCCAAACACCACGGGAAGGACAGCGACAAGGAAGAGCGGGGTGAGGAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 90 bp GAGCGCATGTGCCGGGTCAGGTCCTGCAGCGACCAGAACCGCTTGTaGCACACGCTGCAGACCTTCTTCCTCTTGTCTGCCTTGCTGGCC +
Preference number: 6 (lower is better)
Translates to: ERMCRVRSCSDQNRL*HTLQTFFLLSALLA
Trigger: GGCCAGCAAGGCAGACAAGAGGAAGAAGGTCTGCAGCGTGTGCAACAAGCGGTTCTGGTCGCTGCAGGACCTGACCCGGCACATGCGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 72 bp CGATGTAGTCGCAGATGTTGCACTGGTATGGCGAGATaGCCAGGTGGGAGCGCACGTGGGCACGCAAGACCC +
Preference number: 6 (lower is better)
Translates to: RCSRRCCTGMAR*PGGSARGHARP
Trigger: GGGTCTTGCGTGCCCACGTGCGCTCCCACCTGGGCATCTCGCCATACCAGTGCAACATCTGCGACTACATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 72 bp CAGAACCTCCTAAGCTGTCTGAAGCCGTGGTGTTACTaGCAGTGCTTGCGGGCCCTGGGTCCGCCACCTTGG +
Preference number: 6 (lower is better)
Translates to: QNLLSCLKPWCY*QCLRALGPPPW
Trigger: CCAAGGTGGCGGACCCAGGGCCCGCAAGCACTGGCAGTAACACCACGGCTTCAGACAGCTTAGGAGGTTCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 72 bp CGGAGCCGGCTGGCTTCGTTCCACTCTGCCAGGCTGTaGGTTCAGAGGACAGCTATTTGCAGATGCCCTGGC +
Preference number: 6 (lower is better)
Translates to: RSRLASFHSARL*VQRTAICRCPG
Trigger: GCCAGGGCATCTGCAAATAGCTGTCCTCTGAACGCACAGCCTGGCAGAGTGGAACGAAGCCAGCCGGCTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 72 bp TGTTGGTGTCTGTGGTGGCCAGCATCTTCTCGATGCTaGCAAACTCCCCGCTGGAGTCCAGGTCCACCCCGC +
Preference number: 6 (lower is better)
Translates to: CWCLWWPASSRC*QTPRWSPGPPR
Trigger: GCGGGGTGGACCTGGACTCCAGCGGGGAGTTTGCCAGCATCGAGAAGATGCTGGCCACCACAGACACCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 72 bp CCTTGTCGCTGTCCTTCCCGTGGTGTTTGGCATGCCTaGCTTTCTGGTGGATCCGCTGGTGGCGAACCAGGC +
Preference number: 6 (lower is better)
Translates to: PCRCPSRGVWHA*LSGGSAGGEPG
Trigger: GCCTGGTTCGCCACCAGCGGATCCACCAGAAAGCCAGGCATGCCAAACACCACGGGAAGGACAGCGACAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 72 bp CCCGCTCTTCCTTGTCGCTGTCCTTCCCGTGGTGTTTaGCATGCCTGGCTTTCTGGTGGATCCGCTGGTGGC +
Preference number: 6 (lower is better)
Translates to: PALPCRCPSRGV*HAWLSGGSAGG
Trigger: GCCACCAGCGGATCCACCAGAAAGCCAGGCATGCCAAACACCACGGGAAGGACAGCGACAAGGAAGAGCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 72 bp TCAGCCTCGTTCTCTGAGACGGCGTTGTTGCCGCTGTaGGTGGACTCATTCTCGCTGTCCTCCTCACCCCGC +
Preference number: 6 (lower is better)
Translates to: SASFSETALLPL*VDSFSLSSSPR
Trigger: GCGGGGTGAGGAGGACAGCGAGAATGAGTCCACCCACAGCGGCAACAACGCCGTCTCAGAGAACGAGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 72 bp GGGACTTCACAAAGGGTGTGTAGTGGCTACCGAAGCTaGGTGGGCCACTCCTTGCTCTGGGCCTTGGGTGGG +
Preference number: 6 (lower is better)
Translates to: GTSQRVCSGYRS*VGHSLLWALGG
Trigger: CCCACCCAAGGCCCAGAGCAAGGAGTGGCCCACCCAGCTTCGGTAGCCACTACACACCCTTTGTGAAGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 72 bp TTACTGCCAGTGCTTGCGGGCCCTGGGTCCGCCACCTaGGTTTTCAGCAGGGTGGGGGCCGAGGATACAGAT +
Preference number: 6 (lower is better)
Translates to: LLPVLAGPGSAT*VFSRVGAEDTD
Trigger: ATCTGTATCCTCGGCCCCCACCCTGCTGAAAACCAAGGTGGCGGACCCAGGGCCCGCAAGCACTGGCAGTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 72 bp CCCCGCTCTTCCTTGTCGCTGTCCTTCCCGTGGTGTTaGGCATGCCTGGCTTTCTGGTGGATCCGCTGGTGG +
Preference number: 6 (lower is better)
Translates to: PRSSLSLSFPWC*ACLAFWWIRWW
Trigger: CCACCAGCGGATCCACCAGAAAGCCAGGCATGCCAAACACCACGGGAAGGACAGCGACAAGGAAGAGCGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 72 bp GGAGCCAGCTCAGCCTCGTTCTCTGAGACGGCGTTGTaGCCGCTGTGGGTGGACTCATTCTCGCTGTCCTCC +
Preference number: 6 (lower is better)
Translates to: GASSASFSETAL*PLWVDSFSLSS
Trigger: GGAGGACAGCGAGAATGAGTCCACCCACAGCGGCAACAACGCCGTCTCAGAGAACGAGGCTGAGCTGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 72 bp GGCTGTGCCAACAGGGTGACCATCCAGCTGCCGCCCTaGGGCCTTCTTCACACACAAGACATGGCTCCGCGT +
Preference number: 6 (lower is better)
Translates to: GCANRVTIQLPP*GLLHTQDMAPR
Trigger: ACGCGGAGCCATGTCTTGTGTGTGAAGAAGGCCCAAGGGCGGCAGCTGGATGGTCACCCTGTTGGCACAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 90 bp TTGCTGGCATTGGGAGCCAGCTCAGCCTCGTTCTCTGAGACGGCGTaGTTGCCGCTGTGGGTGGACTCATTCTCGCTGTCCTCCTCACCC +
Preference number: 6 (lower is better)
Translates to: LLALGASSASFSETA*LPLWVDSFSLSSSP
Trigger: GGGTGAGGAGGACAGCGAGAATGAGTCCACCCACAGCGGCAACAACGCCGTCTCAGAGAACGAGGCTGAGCTGGCTCCCAATGCCAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 90 bp TGGGAGCGCATGTGCCGGGTCAGGTCCTGCAGCGACCAGAACCGCTaGTTGCACACGCTGCAGACCTTCTTCCTCTTGTCTGCCTTGCTG +
Preference number: 6 (lower is better)
Translates to: WERMCRVRSCSDQNR*LHTLQTFFLLSALL
Trigger: CAGCAAGGCAGACAAGAGGAAGAAGGTCTGCAGCGTGTGCAACAAGCGGTTCTGGTCGCTGCAGGACCTGACCCGGCACATGCGCTCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS TCA 72 bp GTCTGCCGCCACATGGGTCTGCTTGTGCAGAGCCAGTaGGCAGAGCATGGGGAACGCCTTGTCACAGGTGTC +
Preference number: 6 (lower is better)
Translates to: VCRHMGLLVQSQ*AEHGERLVTGV
Trigger: GACACCTGTGACAAGGCGTTCCCCATGCTCTGCTCACTGGCTCTGCACAAGCAGACCCATGTGGCGGCAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS TCA 72 bp AGCCCACCCTCCCCTGCCCATCTCGGGGCAGAGAACTaGCATCCGACAGCTGCACTAATCTCTCCCAGTTGC +
Preference number: 6 (lower is better)
Translates to: SPPSPAHLGAEN*HPTAALISPSC
Trigger: GCAACTGGGAGAGATTAGTGCAGCTGTCGGATGTCAGTTCTCTGCCCCGAGATGGGCAGGGGAGGGTGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 72 bp CCGGGGCGCAGAAGGCGTCCACCAGCTCGGCCGCGCTaGTACTCACATACTCGATGTTCTTCTCGATATCCT +
Preference number: 6 (lower is better)
Translates to: PGRRRRPPARPR*YSHTRCSSRYP
Trigger: AGGATATCGAGAAGAACATCGAGTATGTGAGTAGCAGCGCGGCCGAGCTGGTGGACGCCTTCTGCGCCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 72 bp GAGCCAGCTCAGCCTCGTTCTCTGAGACGGCGTTGTTaGCGCTGTGGGTGGACTCATTCTCGCTGTCCTCCT +
Preference number: 6 (lower is better)
Translates to: EPAQPRSLRRRC*RCGWTHSRCPP
Trigger: AGGAGGACAGCGAGAATGAGTCCACCCACAGCGGCAACAACGCCGTCTCAGAGAACGAGGCTGAGCTGGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 72 bp GCCGGGTCAGGTCCTGCAGCGACCAGAACCGCTTGTTaGACACGCTGCAGACCTTCTTCCTCTTGTCTGCCT +
Preference number: 6 (lower is better)
Translates to: AGSGPAATRTAC*TRCRPSSSCLP
Trigger: AGGCAGACAAGAGGAAGAAGGTCTGCAGCGTGTGCAACAAGCGGTTCTGGTCGCTGCAGGACCTGACCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 72 bp TGGCCTCTCCCTGGAGCAGGTCCTTGTTCAGAGGATTaGTCCAGGAGAACCTCGTCCCTCACCCAGGTCAGC +
Preference number: 6 (lower is better)
Translates to: WPLPGAGPCSED*SRRTSSLTQVS
Trigger: GCTGACCTGGGTGAGGGACGAGGTTCTCCTGGAGCAATCCTCTGAACAAGGACCTGCTCCAGGGAGAGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 72 bp CTTTGGGGACAGAACCTCCTAAGCTGTCTGAAGCCGTaGTGTTACTGCCAGTGCTTGCGGGCCCTGGGTCCG +
Preference number: 6 (lower is better)
Translates to: LWGQNLLSCLKP*CYCQCLRALGP
Trigger: CGGACCCAGGGCCCGCAAGCACTGGCAGTAACACCACGGCTTCAGACAGCTTAGGAGGTTCTGTCCCCAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 72 bp CTGTCCTTCCCGTGGTGTTTGGCATGCCTGGCTTTCTaGTGGATCCGCTGGTGGCGAACCAGGCTGTGCTTC +
Preference number: 6 (lower is better)
Translates to: LSFPWCLACLAF*WIRWWRTRLCF
Trigger: GAAGCACAGCCTGGTTCGCCACCAGCGGATCCACCAGAAAGCCAGGCATGCCAAACACCACGGGAAGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 72 bp GCCTTGAGTTCCCCCTCTGTGATCTCCTGCTTGATCTaGGCCTCCATGCTCAGCGGCAGCAGGGCCTCGATG +
Preference number: 6 (lower is better)
Translates to: ALSSPSVISCLI*ASMLSGSRASM
Trigger: CATCGAGGCCCTGCTGCCGCTGAGCATGGAGGCCAAGATCAAGCAGGAGATCACAGAGGGGGAACTCAAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CAA 72 bp CGGGGACAGTGGGGACAGGTGATCTTCTGCAGGCAGTaGGTGTACGAGTTCCGCTTGGCCCTCAGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: RGQWGQVIFCRQ*VYEFRLALSSL
Trigger: CAAGCTGCTGAGGGCCAAGCGGAACTCGTACACCAACTGCCTGCAGAAGATCACCTGTCCCCACTGTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 72 bp TTGGGAGCCAGCTCAGCCTCGTTCTCTGAGACGGCGTaGTTGCCGCTGTGGGTGGACTCATTCTCGCTGTCC +
Preference number: 6 (lower is better)
Translates to: LGASSASFSETA*LPLWVDSFSLS
Trigger: GGACAGCGAGAATGAGTCCACCCACAGCGGCAACAACGCCGTCTCAGAGAACGAGGCTGAGCTGGCTCCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 72 bp TGCCGGGTCAGGTCCTGCAGCGACCAGAACCGCTTGTaGCACACGCTGCAGACCTTCTTCCTCTTGTCTGCC +
Preference number: 6 (lower is better)
Translates to: CRVRSCSDQNRL*HTLQTFFLLSA
Trigger: GGCAGACAAGAGGAAGAAGGTCTGCAGCGTGTGCAACAAGCGGTTCTGGTCGCTGCAGGACCTGACCCGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 72 bp CTGGCCTCTCCCTGGAGCAGGTCCTTGTTCAGAGGATaGCTCCAGGAGAACCTCGTCCCTCACCCAGGTCAG +
Preference number: 6 (lower is better)
Translates to: LASPWSRSLFRG*LQENLVPHPGQ
Trigger: CTGACCTGGGTGAGGGACGAGGTTCTCCTGGAGCAATCCTCTGAACAAGGACCTGCTCCAGGGAGAGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 90 bp CGGAAGACTGATCTGAGGGGGAGCCGAGGCTGCCATCTTCAGAATTaGCTGGATGTCTGCCAGCTCGATGGCCGACTCGCCAGAGATGGG +
Preference number: 6 (lower is better)
Translates to: RKTDLRGSRGCHLQN*LDVCQLDGRLARDG
Trigger: CCCATCTCTGGCGAGTCGGCCATCGAGCTGGCAGACATCCAGCAAATTCTGAAGATGGCAGCCTCGGCTCCCCCTCAGATCAGTCTTCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CAA 90 bp TCGGCCGCGCTGCTACTCACATACTCGATGTTCTTCTCGATATCCTaGCGGGTGGCCTTGAGGTGCTTCTTGCGCAGGTGCCGCTCGCAG +
Preference number: 6 (lower is better)
Translates to: SAALLLTYSMFFSIS*RVALRCFLRRCRSQ
Trigger: CTGCGAGCGGCACCTGCGCAAGAAGCACCTCAAGGCCACCCGCAAGGATATCGAGAAGAACATCGAGTATGTGAGTAGCAGCGCGGCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS TCA 72 bp GTTGCTGGCATTGGGAGCCAGCTCAGCCTCGTTCTCTaGGACGGCGTTGTTGCCGCTGTGGGTGGACTCATT +
Preference number: 6 (lower is better)
Translates to: VAGIGSQLSLVL*DGVVAAVGGLI
Trigger: AATGAGTCCACCCACAGCGGCAACAACGCCGTCTCAGAGAACGAGGCTGAGCTGGCTCCCAATGCCAGCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 72 bp CTCCTAAGCTGTCTGAAGCCGTGGTGTTACTGCCAGTaGTTGCGGGCCCTGGGTCCGCCACCTTGGTTTTCA +
Preference number: 6 (lower is better)
Translates to: LLSCLKPWCYCQ*LRALGPPPWFS
Trigger: TGAAAACCAAGGTGGCGGACCCAGGGCCCGCAAGCACTGGCAGTAACACCACGGCTTCAGACAGCTTAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 72 bp TCTTCCTTGTCGCTGTCCTTCCCGTGGTGTTTGGCATaGCTGGCTTTCTGGTGGATCCGCTGGTGGCGAACC +
Preference number: 6 (lower is better)
Translates to: SSLSLSFPWCLA*LAFWWIRWWRT
Trigger: GGTTCGCCACCAGCGGATCCACCAGAAAGCCAGGCATGCCAAACACCACGGGAAGGACAGCGACAAGGAAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS GCA 72 bp GGTCCTGCAGCGACCAGAACCGCTTGTTGCACACGCTaGAGACCTTCTTCCTCTTGTCTGCCTTGCTGGCCA +
Preference number: 6 (lower is better)
Translates to: GPAATRTACCTR*RPSSSCLPCWP
Trigger: TGGCCAGCAAGGCAGACAAGAGGAAGAAGGTCTGCAGCGTGTGCAACAAGCGGTTCTGGTCGCTGCAGGACC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 72 bp GCCGAGCTCAGTGACTTTCCGCAGATGCTGCATGAGTaGTCGGCTCCTCCAGTGTCTGTGTTGTGCTGGCGA +
Preference number: 6 (lower is better)
Translates to: AELSDFPQMLHE*SAPPVSVLCWR
Trigger: TCGCCAGCACAACACAGACACTGGAGGAGCCGACCACTCATGCAGCATCTGCGGAAAGTCACTGAGCTCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000471433.5
ENST00000475946.5
ENST00000483150.1
ENST00000491191.5
CDS CCA 72 bp TGTAGGGAGCTGGCCCAAGGGAAAACCCGGGGACAGTaGGGACAGGTGATCTTCTGCAGGCAGTTGGTGTAC +
Preference number: 6 (lower is better)
Translates to: CRELAQGKTRGQ*GQVIFCRQLVY
Trigger: GTACACCAACTGCCTGCAGAAGATCACCTGTCCCCACTGTCCCCGGGTTTTCCCTTGGGCCAGCTCCCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 72 bp TCCTTCCCGTGGTGTTTGGCATGCCTGGCTTTCTGGTaGATCCGCTGGTGGCGAACCAGGCTGTGCTTCAAG +
Preference number: 6 (lower is better)
Translates to: SFPWCLACLAFW*IRWWRTRLCFK
Trigger: CTTGAAGCACAGCCTGGTTCGCCACCAGCGGATCCACCAGAAAGCCAGGCATGCCAAACACCACGGGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 72 bp TGCGTGGCCCAGATTCTCTTGCTGGCCGGGCTGACCTaGATGCTTCTCCCAGCTGACTTCATTCACAGCAGG +
Preference number: 6 (lower is better)
Translates to: CVAQILLLAGLT*MLLPADFIHSR
Trigger: CCTGCTGTGAATGAAGTCAGCTGGGAGAAGCATCCAGGTCAGCCCGGCCAGCAAGAGAATCTGGGCCACGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 72 bp TGGAAGGGCTGCAGGGACAGGTGCTTTATGCTGTCCTaGGTCGCGGGGAGAACTGTGAGAGAACCGCCTAGG +
Preference number: 6 (lower is better)
Translates to: WKGCRDRCFMLS*VAGRTVREPPR
Trigger: CCTAGGCGGTTCTCTCACAGTTCTCCCCGCGACCAAGGACAGCATAAAGCACCTGTCCCTGCAGCCCTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CAA 72 bp GGCGTCTTCTTGCCGCCGGGCGCTGTCATGAAGGCCTaGAGTTCCCCCTCTGTGATCTCCTGCTTGATCTTG +
Preference number: 6 (lower is better)
Translates to: GVFLPPGAVMKA*SSPSVISCLIL
Trigger: CAAGATCAAGCAGGAGATCACAGAGGGGGAACTCAAGGCCTTCATGACAGCGCCCGGCGGCAAGAAGACGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CAA 72 bp CTAAGCTGTCTGAAGCCGTGGTGTTACTGCCAGTGCTaGCGGGCCCTGGGTCCGCCACCTTGGTTTTCAGCA +
Preference number: 6 (lower is better)
Translates to: LSCLKPWCYCQC*RALGPPPWFSA
Trigger: TGCTGAAAACCAAGGTGGCGGACCCAGGGCCCGCAAGCACTGGCAGTAACACCACGGCTTCAGACAGCTTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 72 bp GTGATCTTCTGCAGGCAGTTGGTGTACGAGTTCCGCTaGGCCCTCAGCAGCTTGTCTTCTGGGGGACTGCCC +
Preference number: 6 (lower is better)
Translates to: VIFCRQLVYEFR*ALSSLSSGGLP
Trigger: GGGCAGTCCCCCAGAAGACAAGCTGCTGAGGGCCAAGCGGAACTCGTACACCAACTGCCTGCAGAAGATCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 90 bp GAGCATGGGGAACGCCTTGTCACAGGTGTCGCAGACAAAACGGTGTaGCTCGCTGATGCACCTCCGCAGGTTTGTTTCGCACCAGGCCTG +
Preference number: 6 (lower is better)
Translates to: EHGERLVTGVADKTV*LADAPPQVCFAPGL
Trigger: CAGGCCTGGTGCGAAACAAACCTGCGGAGGTGCATCAGCGAGCAACACCGTTTTGTCTGCGACACCTGTGACAAGGCGTTCCCCATGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CAA 90 bp AAGCCCTTCTGGAAGGGCTGCAGGGACAGGTGCTTTATGCTGTCCTaGGTCGCGGGGAGAACTGTGAGAGAACCGCCTAGGGAAGCAGCT +
Preference number: 6 (lower is better)
Translates to: KPFWKGCRDRCFMLS*VAGRTVREPPREAA
Trigger: AGCTGCTTCCCTAGGCGGTTCTCTCACAGTTCTCCCCGCGACCAAGGACAGCATAAAGCACCTGTCCCTGCAGCCCTTCCAGAAGGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CAA 90 bp TGCTGGATGTCTGCCAGCTCGATGGCCGACTCGCCAGAGATGGGCTaGACCACAATGCTGCTGTCAGGCTGGATGATGAAGCCCTTCTGG +
Preference number: 6 (lower is better)
Translates to: CWMSASSMADSPEMG*TTMLLSGWMMKPFW
Trigger: CCAGAAGGGCTTCATCATCCAGCCTGACAGCAGCATTGTGGTCAAGCCCATCTCTGGCGAGTCGGCCATCGAGCTGGCAGACATCCAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CAA 90 bp TGGGGACAGGTGATCTTCTGCAGGCAGTTGGTGTACGAGTTCCGCTaGGCCCTCAGCAGCTTGTCTTCTGGGGGACTGCCCTGCTCTTCA +
Preference number: 6 (lower is better)
Translates to: WGQVIFCRQLVYEFR*ALSSLSSGGLPCSS
Trigger: TGAAGAGCAGGGCAGTCCCCCAGAAGACAAGCTGCTGAGGGCCAAGCGGAACTCGTACACCAACTGCCTGCAGAAGATCACCTGTCCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 90 bp TGGGTCTGCTTGTGCAGAGCCAGTGAGCAGAGCATGGGGAACGCCTaGTCACAGGTGTCGCAGACAAAACGGTGTTGCTCGCTGATGCAC +
Preference number: 6 (lower is better)
Translates to: WVCLCRASEQSMGNA*SQVSQTKRCCSLMH
Trigger: GTGCATCAGCGAGCAACACCGTTTTGTCTGCGACACCTGTGACAAGGCGTTCCCCATGCTCTGCTCACTGGCTCTGCACAAGCAGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS TCA 72 bp ACTCGATGTTCTTCTCGATATCCTTGCGGGTGGCCTTaGGGTGCTTCTTGCGCAGGTGCCGCTCGCAGTTGG +
Preference number: 6 (lower is better)
Translates to: TRCSSRYPCGWP*GASCAGAARSW
Trigger: CCAACTGCGAGCGGCACCTGCGCAAGAAGCACCTCAAGGCCACCCGCAAGGATATCGAGAAGAACATCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS TCA 72 bp GGATCCGCTGGTGGCGAACCAGGCTGTGCTTCAAGGTaGAGGTTCGCTCGCAGGTCTGACATTTGTATGGCC +
Preference number: 6 (lower is better)
Translates to: GSAGGEPGCASR*RFARRSDICMA
Trigger: GGCCATACAAATGTCAGACCTGCGAGCGAACCTTCACCTTGAAGCACAGCCTGGTTCGCCACCAGCGGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS TCA 72 bp CTCAGAGACAGCCTGTATTCACTGCAGCACTGGCTCTaGAGGCTGCTGGGTAGGAACGTGAGCAGGAGCTGG +
Preference number: 6 (lower is better)
Translates to: LRDSLYSLQHWL*RLLGRNVSRSW
Trigger: CCAGCTCCTGCTCACGTTCCTACCCAGCAGCCTTCAGAGCCAGTGCTGCAGTGAATACAGGCTGTCTCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS TCA 72 bp CTTGCTGGCCGGGCTGACCTGGATGCTTCTCCCAGCTaGCTTCATTCACAGCAGGGTATGGCCAGTTGCTCA +
Preference number: 6 (lower is better)
Translates to: LAGRADLDASPS*LHSQQGMASCS
Trigger: TGAGCAACTGGCCATACCCTGCTGTGAATGAAGTCAGCTGGGAGAAGCATCCAGGTCAGCCCGGCCAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS TCA 72 bp TTTGCATCCACCAGATCCCTCTGCCTGCCTGGAATCTaGGGGAAATGTGCCCTCCTGGGCCCTGAACTCACC +
Preference number: 6 (lower is better)
Translates to: FASTRSLCLPGI*GKCALLGPELT
Trigger: GGTGAGTTCAGGGCCCAGGAGGGCACATTTCCCTCAGATTCCAGGCAGGCAGAGGGATCTGGTGGATGCAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 72 bp AGCCGAGGCTGCCATCTTCAGAATTTGCTGGATGTCTaGCAGCTCGATGGCCGACTCGCCAGAGATGGGCTT +
Preference number: 6 (lower is better)
Translates to: SRGCHLQNLLDV*QLDGRLARDGL
Trigger: AAGCCCATCTCTGGCGAGTCGGCCATCGAGCTGGCAGACATCCAGCAAATTCTGAAGATGGCAGCCTCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 72 bp GAAGGGCGGAAGACTGATCTGAGGGGGAGCCGAGGCTaGCATCTTCAGAATTTGCTGGATGTCTGCCAGCTC +
Preference number: 6 (lower is better)
Translates to: EGRKTDLRGSRG*HLQNLLDVCQL
Trigger: GAGCTGGCAGACATCCAGCAAATTCTGAAGATGGCAGCCTCGGCTCCCCCTCAGATCAGTCTTCCGCCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 72 bp GCAACCCTGATAAGTAGACACATCACGTGTTGCTCCTaGGAGTCTCCTGGGGACGTGTTACTGAGCGGCCGC +
Preference number: 6 (lower is better)
Translates to: ATLISRHITCCS*ESPGDVLLSGR
Trigger: GCGGCCGCTCAGTAACACGTCCCCAGGAGACTCGCAGGAGCAACACGTGATGTGTCTACTTATCAGGGTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000379933.7
CDS CCA 72 bp CCAGAGATGGGCTTGACCACAATGCTGCTGTCAGGCTaGATGATGAAGCCCTTCTGGAAGGGCTGCAGGGAC +
Preference number: 6 (lower is better)
Translates to: PEMGLTTMLLSG*MMKPFWKGCRD
Trigger: GTCCCTGCAGCCCTTCCAGAAGGGCTTCATCATCCAGCCTGACAGCAGCATTGTGGTCAAGCCCATCTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CCA 72 bp GCAATGCCCATCTCCAACCTCTGTGCAGAGGAAGCCTaGCCTCTCCCTGGAGCAGGTCCTTGTTCAGAGGAT +
Preference number: 6 (lower is better)
Translates to: AMPISNLCAEEA*PLPGAGPCSED
Trigger: ATCCTCTGAACAAGGACCTGCTCCAGGGAGAGGCCAGGCTTCCTCTGCACAGAGGTTGGAGATGGGCATTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 72 bp TCTGCCAGCTCGATGGCCGACTCGCCAGAGATGGGCTaGACCACAATGCTGCTGTCAGGCTGGATGATGAAG +
Preference number: 6 (lower is better)
Translates to: SASSMADSPEMG*TTMLLSGWMMK
Trigger: CTTCATCATCCAGCCTGACAGCAGCATTGTGGTCAAGCCCATCTCTGGCGAGTCGGCCATCGAGCTGGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CAA 72 bp TTCTCGATATCCTTGCGGGTGGCCTTGAGGTGCTTCTaGCGCAGGTGCCGCTCGCAGTTGGCTTTGACAGTG +
Preference number: 6 (lower is better)
Translates to: FSISLRVALRCF*RRCRSQLALTV
Trigger: CACTGTCAAAGCCAACTGCGAGCGGCACCTGCGCAAGAAGCACCTCAAGGCCACCCGCAAGGATATCGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CAA 72 bp CAGTTGGTGTACGAGTTCCGCTTGGCCCTCAGCAGCTaGTCTTCTGGGGGACTGCCCTGCTCTTCATCACTG +
Preference number: 6 (lower is better)
Translates to: QLVYEFRLALSS*SSGGLPCSSSL
Trigger: CAGTGATGAAGAGCAGGGCAGTCCCCCAGAAGACAAGCTGCTGAGGGCCAAGCGGAACTCGTACACCAACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 72 bp ATGTGCCGGGTCAGGTCCTGCAGCGACCAGAACCGCTaGTTGCACACGCTGCAGACCTTCTTCCTCTTGTCT +
Preference number: 6 (lower is better)
Translates to: MCRVRSCSDQNR*LHTLQTFFLLS
Trigger: AGACAAGAGGAAGAAGGTCTGCAGCGTGTGCAACAAGCGGTTCTGGTCGCTGCAGGACCTGACCCGGCACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 90 bp AGCGACCAGAACCGCTTGTTGCACACGCTGCAGACCTTCTTCCTCTaGTCTGCCTTGCTGGCCACGCTTTTGGGGGAGTCTGTCTTTGGT +
Preference number: 6 (lower is better)
Translates to: SDQNRLLHTLQTFFL*SALLATLLGESVFG
Trigger: ACCAAAGACAGACTCCCCCAAAAGCGTGGCCAGCAAGGCAGACAAGAGGAAGAAGGTCTGCAGCGTGTGCAACAAGCGGTTCTGGTCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS TCA 72 bp TGTCACAGGTGTCGCAGACAAAACGGTGTTGCTCGCTaGTGCACCTCCGCAGGTTTGTTTCGCACCAGGCCT +
Preference number: 6 (lower is better)
Translates to: CHRCRRQNGVAR*CTSAGLFRTRP
Trigger: AGGCCTGGTGCGAAACAAACCTGCGGAGGTGCATCAGCGAGCAACACCGTTTTGTCTGCGACACCTGTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS TCA 72 bp GGTGCTTTATGCTGTCCTTGGTCGCGGGGAGAACTGTaGGAGAACCGCCTAGGGAAGCAGCTTCGAAAGGTG +
Preference number: 6 (lower is better)
Translates to: GALCCPWSRGEL*ENRLGKQLRKV
Trigger: CACCTTTCGAAGCTGCTTCCCTAGGCGGTTCTCTCACAGTTCTCCCCGCGACCAAGGACAGCATAAAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS TCA 72 bp GTCTGTCTTTGGTTTCTTGTCATCGTCGCTCTTCTCTaGGGACCTTTTCTCGGCCGCGCTCTCCCCGTCGGA +
Preference number: 6 (lower is better)
Translates to: VCLWFLVIVALL*GPFLGRALPVG
Trigger: TCCGACGGGGAGAGCGCGGCCGAGAAAAGGTCCTCAGAGAAGAGCGACGATGACAAGAAACCAAAGACAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS TCA 72 bp ACCAAACCAGCGTGGCGTGAAGCACTGGGCAGAGTCTaGGGGACTTCACAAAGGGTGTGTAGTGGCTACCGA +
Preference number: 6 (lower is better)
Translates to: TKPAWREALGRV*GTSQRVCSGYR
Trigger: TCGGTAGCCACTACACACCCTTTGTGAAGTCCCTCAGACTCTGCCCAGTGCTTCACGCCACGCTGGTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 72 bp ATGATGAAGCCCTTCTGGAAGGGCTGCAGGGACAGGTaGTTTATGCTGTCCTTGGTCGCGGGGAGAACTGTG +
Preference number: 6 (lower is better)
Translates to: MMKPFWKGCRDR*FMLSLVAGRTV
Trigger: CACAGTTCTCCCCGCGACCAAGGACAGCATAAAGCACCTGTCCCTGCAGCCCTTCCAGAAGGGCTTCATCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 72 bp ATGTTCTTCTCGATATCCTTGCGGGTGGCCTTGAGGTaGTTCTTGCGCAGGTGCCGCTCGCAGTTGGCTTTG +
Preference number: 6 (lower is better)
Translates to: MFFSISLRVALR*FLRRCRSQLAL
Trigger: CAAAGCCAACTGCGAGCGGCACCTGCGCAAGAAGCACCTCAAGGCCACCCGCAAGGATATCGAGAAGAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 72 bp CAGTTCAAACACTTCGGAGTGCCTATGATGGACCAGTaGTGTGCCAGGGGTATCCAACACGTGGGCTGTCCC +
Preference number: 6 (lower is better)
Translates to: QFKHFGVPMMDQ*CARGIQHVGCP
Trigger: GGGACAGCCCACGTGTTGGATACCCCTGGCACAGCACTGGTCCATCATAGGCACTCCGAAGTGTTTGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 72 bp CCCACTACTAAGATACAGGAAGGGGGTGGTCTCAGCTaGCCTCACTACTCATGGAGCCGAGGTTCCTGTCAG +
Preference number: 6 (lower is better)
Translates to: PTTKIQEGGGLS*PHYSWSRGSCQ
Trigger: CTGACAGGAACCTCGGCTCCATGAGTAGTGAGGGCAGCTGAGACCACCCCCTTCCTGTATCTTAGTAGTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 72 bp CACTCCCTGCTCCCTGCAACCCTCATCAGAAGAACCTaGGAAATACCTGCCGAGAAGCTGCCACTCAGCTTG +
Preference number: 6 (lower is better)
Translates to: HSLLPATLIRRT*EIPAEKLPLSL
Trigger: CAAGCTGAGTGGCAGCTTCTCGGCAGGTATTTCGCAGGTTCTTCTGATGAGGGTTGCAGGGAGCAGGGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 72 bp CCTCTTGGAGGACAATCGCCTACGTTTCAGAGGAGATaGAGGGGCTGTGGCTGTGGCACTGTTAGGGTCCTT +
Preference number: 6 (lower is better)
Translates to: PLGGQSPTFQRR*RGCGCGTVRVL
Trigger: AAGGACCCTAACAGTGCCACAGCCACAGCCCCTCCATCTCCTCTGAAACGTAGGCGATTGTCCTCCAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000475946.5
ENST00000483150.1
CDS CCA 72 bp TACACAATAACTTTGGCCGAGTTTCACCCTCAGCAGTaGCTGTGCCAACAGGGTGACCATCCAGCTGCCGCC +
Preference number: 6 (lower is better)
Translates to: YTITLAEFHPQQ*LCQQGDHPAAA
Trigger: GGCGGCAGCTGGATGGTCACCCTGTTGGCACAGCCACTGCTGAGGGTGAAACTCGGCCAAAGTTATTGTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 72 bp ACCCACACATCCTTAATGCCTGGACGCTGGCTCAGCTaGGAGCATTTCCTAATGCTGACACTCCCTGCTCCC +
Preference number: 6 (lower is better)
Translates to: THTSLMPGRWLS*EHFLMLTLPAP
Trigger: GGGAGCAGGGAGTGTCAGCATTAGGAAATGCTCCCAGCTGAGCCAGCGTCCAGGCATTAAGGATGTGTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 72 bp TTGTGCAGAGCCAGTGAGCAGAGCATGGGGAACGCCTaGTCACAGGTGTCGCAGACAAAACGGTGTTGCTCG +
Preference number: 6 (lower is better)
Translates to: LCRASEQSMGNA*SQVSQTKRCCS
Trigger: CGAGCAACACCGTTTTGTCTGCGACACCTGTGACAAGGCGTTCCCCATGCTCTGCTCACTGGCTCTGCACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CAA 72 bp TACTCGATGTTCTTCTCGATATCCTTGCGGGTGGCCTaGAGGTGCTTCTTGCGCAGGTGCCGCTCGCAGTTG +
Preference number: 6 (lower is better)
Translates to: YSMFFSISLRVA*RCFLRRCRSQL
Trigger: CAACTGCGAGCGGCACCTGCGCAAGAAGCACCTCAAGGCCACCCGCAAGGATATCGAGAAGAACATCGAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CAA 72 bp AACCGCTTGTTGCACACGCTGCAGACCTTCTTCCTCTaGTCTGCCTTGCTGGCCACGCTTTTGGGGGAGTCT +
Preference number: 6 (lower is better)
Translates to: NRLLHTLQTFFL*SALLATLLGES
Trigger: AGACTCCCCCAAAAGCGTGGCCAGCAAGGCAGACAAGAGGAAGAAGGTCTGCAGCGTGTGCAACAAGCGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS TCA 72 bp GCTGGTGCTGGGTCTTCTCTCTCTGACTCGGCATCGTaGCTCAGTTTCCTCTTGGAGGACAATCGCCTACGT +
Preference number: 6 (lower is better)
Translates to: AGAGSSLSDSAS*LSFLLEDNRLR
Trigger: ACGTAGGCGATTGTCCTCCAAGAGGAAACTGAGTCACGATGCCGAGTCAGAGAGAGAAGACCCAGCACCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000475946.5
ENST00000483150.1
CDS TCA 72 bp CAGGTCCAGCTCAGTTCAAACACTTCGGAGTGCCTATaGTGGACCAGTGCTGTGCCAGGGGTATCCAACACG +
Preference number: 6 (lower is better)
Translates to: QVQLSSNTSECL*WTSAVPGVSNT
Trigger: CGTGTTGGATACCCCTGGCACAGCACTGGTCCATCATAGGCACTCCGAAGTGTTTGAACTGAGCTGGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS TCA 72 bp GCTCATCTGAAACCTCTCTGTGGGCTGTTAAGCACCTaGAATGTGGCTGGTGTGGTGCAGCCAAGACGGGCT +
Preference number: 6 (lower is better)
Translates to: AHLKPLCGLLST*NVAGVVQPRRA
Trigger: AGCCCGTCTTGGCTGCACCACACCAGCCACATTTCAGGTGCTTAACAGCCCACAGAGAGGTTTCAGATGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 72 bp TCTGTGTTGTGCTGGCGAATGTGCATGGTCAGCTGGTaGTGGGTAGTGCAAATCTTCTCACACAGGGGGCAG +
Preference number: 6 (lower is better)
Translates to: SVLCWRMCMVSW*WVVQIFSHRGQ
Trigger: CTGCCCCCTGTGTGAGAAGATTTGCACTACCCAGCACCAGCTGACCATGCACATTCGCCAGCACAACACAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000471433.5
ENST00000475946.5
ENST00000483150.1
ENST00000491191.5
CDS GCA 72 bp AACGCCTTGTCACAGGTGTCGCAGACAAAACGGTGTTaGTCGCTGATGCACCTCCGCAGGTTTGTTTCGCAC +
Preference number: 6 (lower is better)
Translates to: NALSQVSQTKRC*SLMHLRRFVSH
Trigger: GTGCGAAACAAACCTGCGGAGGTGCATCAGCGAGCAACACCGTTTTGTCTGCGACACCTGTGACAAGGCGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 72 bp CAAACACTTCGGAGTGCCTATGATGGACCAGTGCTGTaGCAGGGGTATCCAACACGTGGGCTGTCCCTGTTT +
Preference number: 6 (lower is better)
Translates to: QTLRSAYDGPVL*QGYPTRGLSLF
Trigger: AAACAGGGACAGCCCACGTGTTGGATACCCCTGGCACAGCACTGGTCCATCATAGGCACTCCGAAGTGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 72 bp TCTTCTAAAACCCAAAGCTGCACGCGTGTATGGCCCTaGTGTGTGCTCGTGACCCTGCAGCTGTGTGTGACT +
Preference number: 6 (lower is better)
Translates to: SSKTQSCTRVWP*CVLVTLQLCVT
Trigger: AGTCACACACAGCTGCAGGGTCACGAGCACACAGCAGGGCCATACACGCGTGCAGCTTTGGGTTTTAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 72 bp TCCTGCATTCCCAAGCTGTCTTCTAAAACCCAAAGCTaGACGCGTGTATGGCCCTGCTGTGTGCTCGTGACC +
Preference number: 6 (lower is better)
Translates to: SCIPKLSSKTQS*TRVWPCCVLVT
Trigger: GGTCACGAGCACACAGCAGGGCCATACACGCGTGCAGCTTTGGGTTTTAGAAGACAGCTTGGGAATGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 72 bp CACCCAGGTCAGCATTTCAGAAGGAGACACCTGATCTaGCTCTATCGCTGCCACACACCATGCTATGCAGGC +
Preference number: 6 (lower is better)
Translates to: HPGQHFRRRHLI*LYRCHTPCYAG
Trigger: GCCTGCATAGCATGGTGTGTGGCAGCGATAGAGGCAGATCAGGTGTCTCCTTCTGAAATGCTGACCTGGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 72 bp CATCCTCACACAAAGGATGTCCTCTGTGTAGCCGCCTaGTCTCTTGAACACTCCGTCCCTCACCTCCGATTC +
Preference number: 6 (lower is better)
Translates to: HPHTKDVLCVAA*SLEHSVPHLRF
Trigger: GAATCGGAGGTGAGGGACGGAGTGTTCAAGAGAGCAGGCGGCTACACAGAGGACATCCTTTGTGTGAGGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 72 bp CTCTTTCGTTTCCTGGTTCCTTCTGCCAATCCGATTTaGTCCTGGAGGCTTCGAGGGGGACTTGATCCCCTG +
Preference number: 6 (lower is better)
Translates to: LFRFLVPSANPI*SWRLRGGLDPL
Trigger: CAGGGGATCAAGTCCCCCTCGAAGCCTCCAGGACCAAATCGGATTGGCAGAAGGAACCAGGAAACGAAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000471433.5
ENST00000475946.5
ENST00000483150.1
ENST00000491191.5
CDS CCA 72 bp GTGTCTGTGTTGTGCTGGCGAATGTGCATGGTCAGCTaGTGCTGGGTAGTGCAAATCTTCTCACACAGGGGG +
Preference number: 6 (lower is better)
Translates to: VSVLCWRMCMVS*CWVVQIFSHRG
Trigger: CCCCCTGTGTGAGAAGATTTGCACTACCCAGCACCAGCTGACCATGCACATTCGCCAGCACAACACAGACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000471433.5
ENST00000475946.5
ENST00000483150.1
ENST00000491191.5
CDS CCA 72 bp CTCCCTGCCGTAGGTGGCTCATCTGAAACCTCTCTGTaGGCTGTTAAGCACCTGAAATGTGGCTGGTGTGGT +
Preference number: 6 (lower is better)
Translates to: LPAVGGSSETSL*AVKHLKCGWCG
Trigger: ACCACACCAGCCACATTTCAGGTGCTTAACAGCCCACAGAGAGGTTTCAGATGAGCCACCTACGGCAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 72 bp GAACGCCTTGTCACAGGTGTCGCAGACAAAACGGTGTaGCTCGCTGATGCACCTCCGCAGGTTTGTTTCGCA +
Preference number: 6 (lower is better)
Translates to: ERLVTGVADKTV*LADAPPQVCFA
Trigger: TGCGAAACAAACCTGCGGAGGTGCATCAGCGAGCAACACCGTTTTGTCTGCGACACCTGTGACAAGGCGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CAA 72 bp TCAGGCTTCTTGGCTTCGCTGGGAGTGGCCAAATCCTaGTCCCCTTTCCTGAAGTTCTTGGGGATGGACAGG +
Preference number: 6 (lower is better)
Translates to: SGFLASLGVAKS*SPFLKFLGMDR
Trigger: CCTGTCCATCCCCAAGAACTTCAGGAAAGGGGACAAGGATTTGGCCACTCCCAGCGAAGCCAAGAAGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 72 bp CTGCCTTGCTGGCCACGCTTTTGGGGGAGTCTGTCTTaGGTTTCTTGTCATCGTCGCTCTTCTCTGAGGACC +
Preference number: 6 (lower is better)
Translates to: LPCWPRFWGSLS*VSCHRRSSLRT
Trigger: GGTCCTCAGAGAAGAGCGACGATGACAAGAAACCAAAGACAGACTCCCCCAAAAGCGTGGCCAGCAAGGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 90 bp CTACTCACATACTCGATGTTCTTCTCGATATCCTTGCGGGTGGCCTaGAGGTGCTTCTTGCGCAGGTGCCGCTCGCAGTTGGCTTTGACA +
Preference number: 6 (lower is better)
Translates to: LLTYSMFFSISLRVA*RCFLRRCRSQLALT
Trigger: TGTCAAAGCCAACTGCGAGCGGCACCTGCGCAAGAAGCACCTCAAGGCCACCCGCAAGGATATCGAGAAGAACATCGAGTATGTGAGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS TCA 72 bp GCATCCCTGGGAAGTTGTTTGTGGACAAGCGCGTTGTaGCGCAGCAGTCCTCGATGTGTTCGAAAGGTGACA +
Preference number: 6 (lower is better)
Translates to: ASLGSCLWTSAL*RSSPRCVRKVT
Trigger: TGTCACCTTTCGAACACATCGAGGACTGCTGCGTCACAACGCGCTTGTCCACAAACAACTTCCCAGGGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS GCA 72 bp GCTCAGCTGGGAGCATTTCCTAATGCTGACACTCCCTaGTCCCTGCAACCCTCATCAGAAGAACCTGCGAAA +
Preference number: 6 (lower is better)
Translates to: AQLGAFPNADTP*SLQPSSEEPAK
Trigger: TTTCGCAGGTTCTTCTGATGAGGGTTGCAGGGAGCAGGGAGTGTCAGCATTAGGAAATGCTCCCAGCTGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 72 bp GTGTTGTGCTGGCGAATGTGCATGGTCAGCTGGTGCTaGGTAGTGCAAATCTTCTCACACAGGGGGCAGTTA +
Preference number: 6 (lower is better)
Translates to: VLCWRMCMVSWC*VVQIFSHRGQL
Trigger: TAACTGCCCCCTGTGTGAGAAGATTTGCACTACCCAGCACCAGCTGACCATGCACATTCGCCAGCACAACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000471433.5
ENST00000475946.5
ENST00000483150.1
ENST00000491191.5
CDS CCA 72 bp CCTTCTTCCTCTTGTCTGCCTTGCTGGCCACGCTTTTaGGGGAGTCTGTCTTTGGTTTCTTGTCATCGTCGC +
Preference number: 6 (lower is better)
Translates to: PSSSCLPCWPRF*GSLSLVSCHRR
Trigger: GCGACGATGACAAGAAACCAAAGACAGACTCCCCCAAAAGCGTGGCCAGCAAGGCAGACAAGAGGAAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CCA 72 bp CTGACTGTTCAACCAAACCAGCGTGGCGTGAAGCACTaGGCAGAGTCTGAGGGACTTCACAAAGGGTGTGTA +
Preference number: 6 (lower is better)
Translates to: LTVQPNQRGVKH*AESEGLHKGCV
Trigger: TACACACCCTTTGTGAAGTCCCTCAGACTCTGCCCAGTGCTTCACGCCACGCTGGTTTGGTTGAACAGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 72 bp CTGAACCTTCCAAGCCAGCGGGCGAACTTGACGTCATaGGGACAGGGGTTTAAGCTTCTAAGAAGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: LNLPSQRANLTS*GQGFKLLRSLC
Trigger: GCAGAGGCTTCTTAGAAGCTTAAACCCCTGTCCCAATGACGTCAAGTTCGCCCGCTGGCTTGGAAGGTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000471433.5
ENST00000475946.5
ENST00000483150.1
ENST00000491191.5
CDS CAA 72 bp CTGTATGAAAGGTCTGCCCATTGCATCCCTGGGAAGTaGTTTGTGGACAAGCGCGTTGTGACGCAGCAGTCC +
Preference number: 6 (lower is better)
Translates to: LYERSAHCIPGK*FVDKRVVTQQS
Trigger: GGACTGCTGCGTCACAACGCGCTTGTCCACAAACAACTTCCCAGGGATGCAATGGGCAGACCTTTCATACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CAA 72 bp CTGCTACTCACATACTCGATGTTCTTCTCGATATCCTaGCGGGTGGCCTTGAGGTGCTTCTTGCGCAGGTGC +
Preference number: 6 (lower is better)
Translates to: LLLTYSMFFSIS*RVALRCFLRRC
Trigger: GCACCTGCGCAAGAAGCACCTCAAGGCCACCCGCAAGGATATCGAGAAGAACATCGAGTATGTGAGTAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CAA 72 bp GTGTTGTCCTCCGCTGTCTGCAGAAACGGACTGAACTaGTTGGTGTCTGTGGTGGCCAGCATCTTCTCGATG +
Preference number: 6 (lower is better)
Translates to: VLSSAVCRNGLN*LVSVVASIFSM
Trigger: CATCGAGAAGATGCTGGCCACCACAGACACCAACAAGTTCAGTCCGTTTCTGCAGACAGCGGAGGACAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 90 bp ACGCTGCAGACCTTCTTCCTCTTGTCTGCCTTGCTGGCCACGCTTTaGGGGGAGTCTGTCTTTGGTTTCTTGTCATCGTCGCTCTTCTCT +
Preference number: 6 (lower is better)
Translates to: TLQTFFLLSALLATL*GESVFGFLSSSLFS
Trigger: AGAGAAGAGCGACGATGACAAGAAACCAAAGACAGACTCCCCCAAAAGCGTGGCCAGCAAGGCAGACAAGAGGAAGAAGGTCTGCAGCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 90 bp AACCGCTTGTTGCACACGCTGCAGACCTTCTTCCTCTTGTCTGCCTaGCTGGCCACGCTTTTGGGGGAGTCTGTCTTTGGTTTCTTGTCA +
Preference number: 6 (lower is better)
Translates to: NRLLHTLQTFFLLSA*LATLLGESVFGFLS
Trigger: TGACAAGAAACCAAAGACAGACTCCCCCAAAAGCGTGGCCAGCAAGGCAGACAAGAGGAAGAAGGTCTGCAGCGTGTGCAACAAGCGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 90 bp GCTGCCCTCACTACTCATGGAGCCGAGGTTCCTGTCAGAGCCCCCTaGGGCTCCCTATGTACCAATTCCCAACAGAGATTTAATGTCATC +
Preference number: 6 (lower is better)
Translates to: AALTTHGAEVPVRAP*GSLCTNSQQRFNVI
Trigger: GATGACATTAAATCTCTGTTGGGAATTGGTACATAGGGAGCCCAAGGGGGCTCTGACAGGAACCTCGGCTCCATGAGTAGTGAGGGCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS TCA 72 bp AGGCTGTGCTTCAAGGTGAAGGTTCGCTCGCAGGTCTaGCATTTGTATGGCCTTTCCCCTGTGCTATCATGG +
Preference number: 6 (lower is better)
Translates to: RLCFKVKVRSQV*HLYGLSPVLSW
Trigger: CCATGATAGCACAGGGGAAAGGCCATACAAATGTCAGACCTGCGAGCGAACCTTCACCTTGAAGCACAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334984.10
CDS TCA 72 bp GGTCTAGGCCTGACAACCAGTCTGTGCCCAACCCAATaGTCAGGCAATTTCTTGAGACTGGGGAGTTCCGTA +
Preference number: 6 (lower is better)
Translates to: GLGLTTSLCPTQ*SGNFLRLGSSV
Trigger: TACGGAACTCCCCAGTCTCAAGAAATTGCCTGATCATTGGGTTGGGCACAGACTGGTTGTCAGGCCTAGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 72 bp CATTTCAGAAGGAGACACCTGATCTGCCTCTATCGCTaGCACACACCATGCTATGCAGGCTTGGACTGCTCA +
Preference number: 6 (lower is better)
Translates to: HFRRRHLICLYR*HTPCYAGLDCS
Trigger: TGAGCAGTCCAAGCCTGCATAGCATGGTGTGTGGCAGCGATAGAGGCAGATCAGGTGTCTCCTTCTGAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 72 bp CCCTGCAACCCTCATCAGAAGAACCTGCGAAATACCTaGCGAGAAGCTGCCACTCAGCTTGACCATTTCCTT +
Preference number: 6 (lower is better)
Translates to: PCNPHQKNLRNT*REAATQLDHFL
Trigger: AAGGAAATGGTCAAGCTGAGTGGCAGCTTCTCGGCAGGTATTTCGCAGGTTCTTCTGATGAGGGTTGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 72 bp GCCAGGCTGTGCGTTCAGAGGACAGCTATTTGCAGATaGCCTGGCTCCTTATGTGACCCACACATCCTTAAT +
Preference number: 6 (lower is better)
Translates to: ARLCVQRTAICR*PGSLCDPHILN
Trigger: ATTAAGGATGTGTGGGTCACATAAGGAGCCAGGGCATCTGCAAATAGCTGTCCTCTGAACGCACAGCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 72 bp GGGGCTGTGGCTGTGGCACTGTTAGGGTCCTTCTCATaGATCTTCATATGTCTGTGCATGTTCCCATTGGTG +
Preference number: 6 (lower is better)
Translates to: GAVAVALLGSFS*IFICLCMFPLV
Trigger: CACCAATGGGAACATGCACAGACATATGAAGATCCATGAGAAGGACCCTAACAGTGCCACAGCCACAGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000471433.5
ENST00000475946.5
ENST00000483150.1
CDS CCA 72 bp GCCTCTATCGCTGCCACACACCATGCTATGCAGGCTTaGACTGCTCAGAAATCTCTTGTGGGAGCCACATTA +
Preference number: 6 (lower is better)
Translates to: ASIAATHHAMQA*TAQKSLVGATL
Trigger: TAATGTGGCTCCCACAAGAGATTTCTGAGCAGTCCAAGCCTGCATAGCATGGTGTGTGGCAGCGATAGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 72 bp CACAGCCTGTCTACAGCACCAGCCCTACCATCACTGTaGATTAATCACCCACCAAATCCTACCCATCCCAAC +
Preference number: 6 (lower is better)
Translates to: HSLSTAPALPSL*INHPPNPTHPN
Trigger: GTTGGGATGGGTAGGATTTGGTGGGTGATTAATCCACAGTGATGGTAGGGCTGGTGCTGTAGACAGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 72 bp CCTTATGTGACCCACACATCCTTAATGCCTGGACGCTaGCTCAGCTGGGAGCATTTCCTAATGCTGACACTC +
Preference number: 6 (lower is better)
Translates to: PYVTHTSLMPGR*LSWEHFLMLTL
Trigger: GAGTGTCAGCATTAGGAAATGCTCCCAGCTGAGCCAGCGTCCAGGCATTAAGGATGTGTGGGTCACATAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 72 bp ACCTTCTTCCTCTTGTCTGCCTTGCTGGCCACGCTTTaGGGGGAGTCTGTCTTTGGTTTCTTGTCATCGTCG +
Preference number: 6 (lower is better)
Translates to: TFFLLSALLATL*GESVFGFLSSS
Trigger: CGACGATGACAAGAAACCAAAGACAGACTCCCCCAAAAGCGTGGCCAGCAAGGCAGACAAGAGGAAGAAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000611109.1
CDS CAA 72 bp GCTGATGTGATCATGGGGAAGTTTAGGCTTCTGTCATaGCCAGGGGGCGCTGGCCATGGCTACTCTAATTGT +
Preference number: 6 (lower is better)
Translates to: ADVIMGKFRLLS*PGGAGHGYSNC
Trigger: ACAATTAGAGTAGCCATGGCCAGCGCCCCCTGGCAATGACAGAAGCCTAAACTTCCCCATGATCACATCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 72 bp ACTACTCATGGAGCCGAGGTTCCTGTCAGAGCCCCCTaGGGCTCCCTATGTACCAATTCCCAACAGAGATTT +
Preference number: 6 (lower is better)
Translates to: TTHGAEVPVRAP*GSLCTNSQQRF
Trigger: AAATCTCTGTTGGGAATTGGTACATAGGGAGCCCAAGGGGGCTCTGACAGGAACCTCGGCTCCATGAGTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 90 bp TTCTCTGTGACCTTCCCTACACTCATGACCGCCGACATCATGGTGTaGATGGAAGATAGGTCTGAACCTTCCAAGCCAGCGGGCGAACTT +
Preference number: 6 (lower is better)
Translates to: FSVTFPTLMTADIMV*MEDRSEPSKPAGEL
Trigger: AAGTTCGCCCGCTGGCTTGGAAGGTTCAGACCTATCTTCCATCAACACCATGATGTCGGCGGTCATGAGTGTAGGGAAGGTCACAGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000471433.5
ENST00000475946.5
ENST00000483150.1
ENST00000491191.5
CDS CAA 90 bp AGGGTTGTTCTGTATGAAAGGTCTGCCCATTGCATCCCTGGGAAGTaGTTTGTGGACAAGCGCGTTGTGACGCAGCAGTCCTCGATGTGT +
Preference number: 6 (lower is better)
Translates to: RVVLYERSAHCIPGK*FVDKRVVTQQSSMC
Trigger: ACACATCGAGGACTGCTGCGTCACAACGCGCTTGTCCACAAACAACTTCCCAGGGATGCAATGGGCAGACCTTTCATACAGAACAACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS TCA 72 bp CCCCTCACCAAACACAGGGCATTATTAGTAAACAGGTaGGGAAAATCCTCTAGGTCGGCTAGCTGGACGTGC +
Preference number: 6 (lower is better)
Translates to: PLTKHRALLVNR*GKSSRSASWTC
Trigger: GCACGTCCAGCTAGCCGACCTAGAGGATTTTCCTCACCTGTTTACTAATAATGCCCTGTGTTTGGTGAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS TCA 72 bp AAGGGTCACTTAAAAGCCTGGGAGGTCAAGGTGCAGTaGGTCATAATCATGTCACTGGACACCAGCCTGGGT +
Preference number: 6 (lower is better)
Translates to: KGHLKAWEVKVQ*VIIMSLDTSLG
Trigger: ACCCAGGCTGGTGTCCAGTGACATGATTATGACTCACTGCACCTTGACCTCCCAGGCTTTTAAGTGACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 72 bp AGACACCTGATCTGCCTCTATCGCTGCCACACACCATaGTATGCAGGCTTGGACTGCTCAGAAATCTCTTGT +
Preference number: 6 (lower is better)
Translates to: RHLICLYRCHTP*YAGLDCSEISC
Trigger: ACAAGAGATTTCTGAGCAGTCCAAGCCTGCATAGCATGGTGTGTGGCAGCGATAGAGGCAGATCAGGTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 72 bp CCCCACACCGATACTTTCTTAACTGCCTCCCTAATGTaGTTGTGCCCAAGTTCAATCACTGGAGCCCGGTGT +
Preference number: 6 (lower is better)
Translates to: PHTDTFLTASLM*LCPSSITGARC
Trigger: ACACCGGGCTCCAGTGATTGAACTTGGGCACAACAACATTAGGGAGGCAGTTAAGAAAGTATCGGTGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 90 bp CTTTTTCCCCACACCGATACTTTCTTAACTGCCTCCCTAATGTTGTaGTGCCCAAGTTCAATCACTGGAGCCCGGTGTGGAGTAACGGGA +
Preference number: 6 (lower is better)
Translates to: LFPHTDTFLTASLML*CPSSITGARCGVTG
Trigger: TCCCGTTACTCCACACCGGGCTCCAGTGATTGAACTTGGGCACAACAACATTAGGGAGGCAGTTAAGAAAGTATCGGTGTGGGGAAAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 90 bp CACCTGATCTGCCTCTATCGCTGCCACACACCATGCTATGCAGGCTaGGACTGCTCAGAAATCTCTTGTGGGAGCCACATTATTTTTCCT +
Preference number: 6 (lower is better)
Translates to: HLICLYRCHTPCYAG*DCSEISCGSHIIFP
Trigger: AGGAAAAATAATGTGGCTCCCACAAGAGATTTCTGAGCAGTCCAAGCCTGCATAGCATGGTGTGTGGCAGCGATAGAGGCAGATCAGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 90 bp GGATGCTTCTCCCAGCTGACTTCATTCACAGCAGGGTATGGCCAGTaGCTCAGTTCTATTCTGATGGACATTCAATGCCCAGCAACATCC +
Preference number: 6 (lower is better)
Translates to: GCFSQLTSFTAGYGQ*LSSILMDIQCPATS
Trigger: GGATGTTGCTGGGCATTGAATGTCCATCAGAATAGAACTGAGCAACTGGCCATACCCTGCTGTGAATGAAGTCAGCTGGGAGAAGCATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS TCA 72 bp CGTGGAAGCCAGCAGGAATTGAAGGGTTGTTCTGTATaGAAGGTCTGCCCATTGCATCCCTGGGAAGTTGTT +
Preference number: 6 (lower is better)
Translates to: RGSQQELKGCSV*KVCPLHPWEVV
Trigger: AACAACTTCCCAGGGATGCAATGGGCAGACCTTTCATACAGAACAACCCTTCAATTCCTGCTGGCTTCCACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS TCA 72 bp CCTAGGAGGGAAAGAAGAACCCTCCCGCCACACTGCTaGTTACCTCCATTTTCTGACCCACTGATAGACTAT +
Preference number: 6 (lower is better)
Translates to: PRRERRTLPPHC*LPPFSDPLIDY
Trigger: ATAGTCTATCAGTGGGTCAGAAAATGGAGGTAATCAGCAGTGTGGCGGGAGGGTTCTTCTTTCCCTCCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475946.5
ENST00000491191.5
CDS TCA 72 bp GGATCAGAAACACTGGAGCTGCGAAGCCCCTACAATTaGAGCTGGATGGCAGAGCAATCACCTGTCACTTTT +
Preference number: 6 (lower is better)
Translates to: GSETLELRSPYN*SWMAEQSPVTF
Trigger: AAAAGTGACAGGTGATTGCTCTGCCATCCAGCTTCAATTGTAGGGGCTTCGCAGCTCCAGTGTTTCTGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 72 bp GTGCTATCATGGGATCCAACATCACTCTCTTTTGACTaGGGGATAAGCCCGTTTCTTCTCAGGGAACAGGTG +
Preference number: 6 (lower is better)
Translates to: VLSWDPTSLSFD*GISPFLLREQV
Trigger: CACCTGTTCCCTGAGAAGAAACGGGCTTATCCCCCAGTCAAAAGAGAGTGATGTTGGATCCCATGATAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334984.10
ENST00000379938.7
CDS CAA 72 bp AAGATAGGTCTGAACCTTCCAAGCCAGCGGGCGAACTaGACGTCATTGGGACAGGGGTTTAAGCTTCTAAGA +
Preference number: 6 (lower is better)
Translates to: KIGLNLPSQRAN*TSLGQGFKLLR
Trigger: TCTTAGAAGCTTAAACCCCTGTCCCAATGACGTCAAGTTCGCCCGCTGGCTTGGAAGGTTCAGACCTATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000471433.5
ENST00000475946.5
ENST00000483150.1
ENST00000491191.5
CDS CAA 72 bp CCGTTTCTTCTCAGGGAACAGGTGGTAACTCCGTGTTaGCGCAACTGGTGGCGTTCACAGTTAGATTTGGTA +
Preference number: 6 (lower is better)
Translates to: PFLLREQVVTPC*RNWWRSQLDLV
Trigger: TACCAAATCTAACTGTGAACGCCACCAGTTGCGCAAACACGGAGTTACCACCTGTTCCCTGAGAAGAAACGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334984.10
ENST00000379938.7
CDS CAA 72 bp GTGGGCTTCAGGGAGAGACCGAGGAGAGATGCAAACTaGTTCCGGAAAAGGAATCAAAATGGCGTTTCTGGA +
Preference number: 6 (lower is better)
Translates to: VGFRERPRRDAN*FRKRNQNGVSG
Trigger: TCCAGAAACGCCATTTTGATTCCTTTTCCGGAACAAGTTTGCATCTCTCCTCGGTCTCTCCCTGAAGCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471433.5
ENST00000491191.5
CDS CAA 72 bp CACACCGATACTTTCTTAACTGCCTCCCTAATGTTGTaGTGCCCAAGTTCAATCACTGGAGCCCGGTGTGGA +
Preference number: 6 (lower is better)
Translates to: HTDTFLTASLML*CPSSITGARCG
Trigger: TCCACACCGGGCTCCAGTGATTGAACTTGGGCACAACAACATTAGGGAGGCAGTTAAGAAAGTATCGGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 72 bp AGGATCAGAAACACTGGAGCTGCGAAGCCCCTACAATaGAAGCTGGATGGCAGAGCAATCACCTGTCACTTT +
Preference number: 6 (lower is better)
Translates to: RIRNTGAAKPLQ*KLDGRAITCHF
Trigger: AAAGTGACAGGTGATTGCTCTGCCATCCAGCTTCAATTGTAGGGGCTTCGCAGCTCCAGTGTTTCTGATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 72 bp AGTGGCCCAGAGATGAGAAACCACTCAGGTGCTTCCTaGGGCTCTCTTCTCTGTCATGTAACTCCATCAAGT +
Preference number: 6 (lower is better)
Translates to: SGPEMRNHSGAS*GSLLCHVTPSS
Trigger: ACTTGATGGAGTTACATGACAGAGAAGAGAGCCCAAGGAAGCACCTGAGTGGTTTCTCATCTCTGGGCCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 90 bp AAGTCCGTGAATCCTAAGTCGTGGAAGCCAGCAGGAATTGAAGGGTaGTTCTGTATGAAAGGTCTGCCCATTGCATCCCTGGGAAGTTGT +
Preference number: 6 (lower is better)
Translates to: KSVNPKSWKPAGIEG*FCMKGLPIASLGSC
Trigger: ACAACTTCCCAGGGATGCAATGGGCAGACCTTTCATACAGAACAACCCTTCAATTCCTGCTGGCTTCCACGACTTAGGATTCACGGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CAA 90 bp GGGATAAGCCCGTTTCTTCTCAGGGAACAGGTGGTAACTCCGTGTTaGCGCAACTGGTGGCGTTCACAGTTAGATTTGGTAGAAAAGAAG +
Preference number: 6 (lower is better)
Translates to: GISPFLLREQVVTPC*RNWWRSQLDLVEKK
Trigger: CTTCTTTTCTACCAAATCTAACTGTGAACGCCACCAGTTGCGCAAACACGGAGTTACCACCTGTTCCCTGAGAAGAAACGGGCTTATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334984.10
ENST00000379938.7
CDS CAA 90 bp CAACTTTTTCCCCACACCGATACTTTCTTAACTGCCTCCCTAATGTaGTTGTGCCCAAGTTCAATCACTGGAGCCCGGTGTGGAGTAACG +
Preference number: 6 (lower is better)
Translates to: QLFPHTDTFLTASLM*LCPSSITGARCGVT
Trigger: CGTTACTCCACACCGGGCTCCAGTGATTGAACTTGGGCACAACAACATTAGGGAGGCAGTTAAGAAAGTATCGGTGTGGGGAAAAAGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 90 bp AAGATAGGTCTGAACCTTCCAAGCCAGCGGGCGAACTTGACGTCATaGGGACAGGGGTTTAAGCTTCTAAGAAGCCTCTGCTATAAAACC +
Preference number: 6 (lower is better)
Translates to: KIGLNLPSQRANLTS*GQGFKLLRSLCYKT
Trigger: GGTTTTATAGCAGAGGCTTCTTAGAAGCTTAAACCCCTGTCCCAATGACGTCAAGTTCGCCCGCTGGCTTGGAAGGTTCAGACCTATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491191.5
CDS TCA 72 bp GAGAAATGCGAGGAAACTTCCTACAGGAGAAGTCCGTaGATCCTAAGTCGTGGAAGCCAGCAGGAATTGAAG +
Preference number: 6 (lower is better)
Translates to: EKCEETSYRRSP*ILSRGSQQELK
Trigger: CTTCAATTCCTGCTGGCTTCCACGACTTAGGATTCACGGACTTCTCCTGTAGGAAGTTTCCTCGCATTTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS TCA 72 bp TGGCATACCAAGGACGAAGTAACCTTGCCTCCTTTCTaGGTGTGCACTACCAACAGGACTCAAACTCATGAG +
Preference number: 6 (lower is better)
Translates to: WHTKDEVTLPPF*VCTTNRTQTHE
Trigger: CTCATGAGTTTGAGTCCTGTTGGTAGTGCACACTCAGAAAGGAGGCAAGGTTACTTCGTCCTTGGTATGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS TCA 72 bp GGATTATCTGGTCCTGCCCTCCTTCAATTTGAAGGATaGGAAAACAGGTTCAGATGTAGCTGGCTGAGGTCC +
Preference number: 6 (lower is better)
Translates to: GLSGPALLQFEG*ENRFRCSWLRS
Trigger: GGACCTCAGCCAGCTACATCTGAACCTGTTTTCTCATCCTTCAAATTGAAGGAGGGCAGGACCAGATAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS TCA 72 bp TCACAGCAGGGTATGGCCAGTTGCTCAGTTCTATTCTaGTGGACATTCAATGCCCAGCAACATCCTCACACA +
Preference number: 6 (lower is better)
Translates to: SQQGMASCSVLF*WTFNAQQHPHT
Trigger: TGTGTGAGGATGTTGCTGGGCATTGAATGTCCATCAGAATAGAACTGAGCAACTGGCCATACCCTGCTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS TCA 72 bp CCTGCGAAATACCTGCCGAGAAGCTGCCACTCAGCTTaGCCATTTCCTTCAGATACTGAATTCCTTCCTCAT +
Preference number: 6 (lower is better)
Translates to: PAKYLPRSCHSA*PFPSDTEFLPH
Trigger: ATGAGGAAGGAATTCAGTATCTGAAGGAAATGGTCAAGCTGAGTGGCAGCTTCTCGGCAGGTATTTCGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 72 bp AAGACTTCATCAGCTTTCTTCTCCAAGTCACCTGACTaGCCGTCTTCTACCATCTTTTTAGCTGGTGCTGGG +
Preference number: 6 (lower is better)
Translates to: KTSSAFFSKSPD*PSSTIFLAGAG
Trigger: CCCAGCACCAGCTAAAAAGATGGTAGAAGACGGGCAGTCAGGTGACTTGGAGAAGAAAGCTGATGAAGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000475946.5
ENST00000483150.1
CDS GCA 72 bp CTTTCTCTGACCCCAAAATGGCTTCTCAGGTTTCTGTaGTATCAGGTCCAGCTCAGTTCAAACACTTCGGAG +
Preference number: 6 (lower is better)
Translates to: LSLTPKWLLRFL*YQVQLSSNTSE
Trigger: CTCCGAAGTGTTTGAACTGAGCTGGACCTGATAGCACAGAAACCTGAGAAGCCATTTTGGGGTCAGAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 72 bp CATAGCCCCCGGAAGTGTTTAAAATCTGTTTCTGCCTaGCCAAGCCTCAGACTCACAGACTCTTCAACAGAA +
Preference number: 6 (lower is better)
Translates to: HSPRKCLKSVSA*PSLRLTDSSTE
Trigger: TTCTGTTGAAGAGTCTGTGAGTCTGAGGCTTGGGCAGGCAGAAACAGATTTTAAACACTTCCGGGGGCTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 72 bp AGGGAACAGGTGGTAACTCCGTGTTTGCGCAACTGGTaGCGTTCACAGTTAGATTTGGTAGAAAAGAAGGCA +
Preference number: 6 (lower is better)
Translates to: REQVVTPCLRNW*RSQLDLVEKKA
Trigger: TGCCTTCTTTTCTACCAAATCTAACTGTGAACGCCACCAGTTGCGCAAACACGGAGTTACCACCTGTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334984.10
ENST00000379938.7
CDS CCA 72 bp CTCAGGGAACAGGTGGTAACTCCGTGTTTGCGCAACTaGTGGCGTTCACAGTTAGATTTGGTAGAAAAGAAG +
Preference number: 6 (lower is better)
Translates to: LREQVVTPCLRN*WRSQLDLVEKK
Trigger: CTTCTTTTCTACCAAATCTAACTGTGAACGCCACCAGTTGCGCAAACACGGAGTTACCACCTGTTCCCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334984.10
ENST00000379938.7
CDS CAA 72 bp TCCCAGCTGACTTCATTCACAGCAGGGTATGGCCAGTaGCTCAGTTCTATTCTGATGGACATTCAATGCCCA +
Preference number: 6 (lower is better)
Translates to: SQLTSFTAGYGQ*LSSILMDIQCP
Trigger: TGGGCATTGAATGTCCATCAGAATAGAACTGAGCAACTGGCCATACCCTGCTGTGAATGAAGTCAGCTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 90 bp AAGATAGGTCTGAACCTTCCAAGCCAGCGGGCGAACTTGACGTCATaGGGACAGGGGTTTAAGCTTCTAAGAAGCCTCTGCTATAAAACT +
Preference number: 6 (lower is better)
Translates to: KIGLNLPSQRANLTS*GQGFKLLRSLCYKT
Trigger: AGTTTTATAGCAGAGGCTTCTTAGAAGCTTAAACCCCTGTCCCAATGACGTCAAGTTCGCCCGCTGGCTTGGAAGGTTCAGACCTATCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000471433.5
ENST00000475946.5
ENST00000483150.1
CDS CAA 90 bp CACATTCACGCCCAGAGTGATGGAAGCTTTCATTTAAACCAAGTCTaGGCATACCAAGGACGAAGTAACCTTGCCTCCTTTCTGAGTGTG +
Preference number: 6 (lower is better)
Translates to: HIHAQSDGSFHLNQV*AYQGRSNLASFLSV
Trigger: CACACTCAGAAAGGAGGCAAGGTTACTTCGTCCTTGGTATGCCAAGACTTGGTTTAAATGAAAGCTTCCATCACTCTGGGCGTGAATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 90 bp GGCTCCCTATGTACCAATTCCCAACAGAGATTTAATGTCATCACCTaGAACTCAGAGATGACCAGGGTCAATGAAGTACCAGACCCGGTT +
Preference number: 6 (lower is better)
Translates to: GSLCTNSQQRFNVIT*NSEMTRVNEVPDPV
Trigger: AACCGGGTCTGGTACTTCATTGACCCTGGTCATCTCTGAGTTCAAGGTGATGACATTAAATCTCTGTTGGGAATTGGTACATAGGGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS TCA 72 bp CGTTGTGACGCAGCAGTCCTCGATGTGTTCGAAAGGTaGCACAACAAATGTCACATCTTAGTGGGTTATCTG +
Preference number: 6 (lower is better)
Translates to: RCDAAVLDVFER*HNKCHILVGYL
Trigger: CAGATAACCCACTAAGATGTGACATTTGTTGTGTCACCTTTCGAACACATCGAGGACTGCTGCGTCACAACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS TCA 72 bp GTAGCATCCCACTGTGGTTCTGCTGCCTCTGGGATTTaGAATGGAGCTGGTGTCTATTTTAGTTCTGGGTTA +
Preference number: 6 (lower is better)
Translates to: VASHCGSAASGI*NGAGVYFSSGL
Trigger: TAACCCAGAACTAAAATAGACACCAGCTCCATTTCAAATCCCAGAGGCAGCAGAACCACAGTGGGATGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 72 bp TATCGCTGCCACACACCATGCTATGCAGGCTTGGACTaGTCAGAAATCTCTTGTGGGAGCCACATTATTTTT +
Preference number: 6 (lower is better)
Translates to: YRCHTPCYAGLD*SEISCGSHIIF
Trigger: AAAAATAATGTGGCTCCCACAAGAGATTTCTGAGCAGTCCAAGCCTGCATAGCATGGTGTGTGGCAGCGATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 72 bp TCCTACCTTAGTGGGTTATCTGAATGGGTCTCCATGTaGGTCTCCAGTCCATACTTGCAAACAAACTCCTTG +
Preference number: 6 (lower is better)
Translates to: SYLSGLSEWVSM*VSSPYLQTNSL
Trigger: CAAGGAGTTTGTTTGCAAGTATGGACTGGAGACCCACATGGAGACCCATTCAGATAACCCACTAAGGTAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 72 bp GAAAATCCCAAAGTCAACAAACAGGCCTTAACAGAGTaGCCCAGAGATGAGAAACCACTCAGGTGCTTCCTT +
Preference number: 6 (lower is better)
Translates to: ENPKVNKQALTE*PRDEKPLRCFL
Trigger: AAGGAAGCACCTGAGTGGTTTCTCATCTCTGGGCCACTCTGTTAAGGCCTGTTTGTTGACTTTGGGATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 90 bp CTGCCACACACCATGCTATGCAGGCTTGGACTGCTCAGAAATCTCTaGTGGGAGCCACATTATTTTTCCTGCAGAACAGAATTATCTAGA +
Preference number: 6 (lower is better)
Translates to: LPHTMLCRLGLLRNL*WEPHYFSCRTELSR
Trigger: TCTAGATAATTCTGTTCTGCAGGAAAAATAATGTGGCTCCCACAAGAGATTTCTGAGCAGTCCAAGCCTGCATAGCATGGTGTGTGGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 90 bp CCTGAACTCACCCCTGAACTTTGTTTTATAACCAACCAGCTTGTTTaGTGCCTAGCCCGTACCCTGTCTCAAACATCACTCTTTCCTTCA +
Preference number: 6 (lower is better)
Translates to: PELTPELCFITNQLV*CLARTLSQTSLFPS
Trigger: TGAAGGAAAGAGTGATGTTTGAGACAGGGTACGGGCTAGGCACAAAACAAGCTGGTTGGTTATAAAACAAAGTTCAGGGGTGAGTTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS TCA 72 bp TTTCTGAGTGTGCACTACCAACAGGACTCAAACTCATaGGAGGCAGGTTTCTCTACCTTTCCTAATCTGGGT +
Preference number: 6 (lower is better)
Translates to: FLSVHYQQDSNS*EAGFSTFPNLG
Trigger: ACCCAGATTAGGAAAGGTAGAGAAACCTGCCTCTCATGAGTTTGAGTCCTGTTGGTAGTGCACACTCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 72 bp CAGCCAACTTTTTCCCCACACCGATACTTTCTTAACTaGCTCCCTAATGTTGTTGTGCCCAAGTTCAATCAC +
Preference number: 6 (lower is better)
Translates to: QPTFSPHRYFLN*LPNVVVPKFNH
Trigger: GTGATTGAACTTGGGCACAACAACATTAGGGAGGCAGTTAAGAAAGTATCGGTGTGGGGAAAAAGTTGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 72 bp ATATCAGGGATTCAGGCAAACAGATGCCCAAATTCCTaGATTCCCAAGCTGTCTTCTAAAACCCAAAGCTGC +
Preference number: 6 (lower is better)
Translates to: ISGIQANRCPNS*IPKLSSKTQSC
Trigger: GCAGCTTTGGGTTTTAGAAGACAGCTTGGGAATGCAGGAATTTGGGCATCTGTTTGCCTGAATCCCTGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 72 bp TCACATCTTAGTGGGTTATCTGAATGGGTCTCCATGTaGGTCTCCAGTCCATACTTGCAAACAAACTCCTTG +
Preference number: 6 (lower is better)
Translates to: SHLSGLSEWVSM*VSSPYLQTNSL
Trigger: CAAGGAGTTTGTTTGCAAGTATGGACTGGAGACCCACATGGAGACCCATTCAGATAACCCACTAAGATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CAA 72 bp TTCTCATGGATCTTCATATGTCTGTGCATGTTCCCATaGGTGGTAAATGACTGGCCACACACAGTGCACTTG +
Preference number: 6 (lower is better)
Translates to: FSWIFICLCMFP*VVNDWPHTVHL
Trigger: CAAGTGCACTGTGTGTGGCCAGTCATTTACCACCAATGGGAACATGCACAGACATATGAAGATCCATGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000471433.5
ENST00000475946.5
ENST00000483150.1
CDS CAA 72 bp GCCCAGAGTGATGGAAGCTTTCATTTAAACCAAGTCTaGGCATACCAAGGACGAAGTAACCTTGCCTCCTTT +
Preference number: 6 (lower is better)
Translates to: AQSDGSFHLNQV*AYQGRSNLASF
Trigger: AAAGGAGGCAAGGTTACTTCGTCCTTGGTATGCCAAGACTTGGTTTAAATGAAAGCTTCCATCACTCTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 72 bp ACCATGCTATGCAGGCTTGGACTGCTCAGAAATCTCTaGTGGGAGCCACATTATTTTTCCTGCAGAACAGAA +
Preference number: 6 (lower is better)
Translates to: TMLCRLGLLRNL*WEPHYFSCRTE
Trigger: TTCTGTTCTGCAGGAAAAATAATGTGGCTCCCACAAGAGATTTCTGAGCAGTCCAAGCCTGCATAGCATGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 72 bp ACCCCTGAACTTTGTTTTATAACCAACCAGCTTGTTTaGTGCCTAGCCCGTACCCTGTCTCAAACATCACTC +
Preference number: 6 (lower is better)
Translates to: TPELCFITNQLV*CLARTLSQTSL
Trigger: GAGTGATGTTTGAGACAGGGTACGGGCTAGGCACAAAACAAGCTGGTTGGTTATAAAACAAAGTTCAGGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS TCA 72 bp TGTGGGTCTCCAGTCCATACTTGCAAACAAACTCCTTaGAACATACTGGGCAGTGAAAGACTTCATCAGCTT +
Preference number: 6 (lower is better)
Translates to: CGSPVHTCKQTP*NILGSERLHQL
Trigger: AAGCTGATGAAGTCTTTCACTGCCCAGTATGTTTCAAGGAGTTTGTTTGCAAGTATGGACTGGAGACCCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000475946.5
ENST00000483150.1
CDS CCA 72 bp ACACAACAAATGTCACATCTTAGTGGGTTATCTGAATaGGTCTCCATGTGGGTCTCCAGTCCATACTTGCAA +
Preference number: 6 (lower is better)
Translates to: TQQMSHLSGLSE*VSMWVSSPYLQ
Trigger: TTGCAAGTATGGACTGGAGACCCACATGGAGACCCATTCAGATAACCCACTAAGATGTGACATTTGTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000483150.1
CDS CAA 72 bp TTTCATGTTCTCTGCCAAGTGAATCGCACCTGGAAGTaGACTCCTTTTCAATTCCATTGGAATGGGATAGCC +
Preference number: 6 (lower is better)
Translates to: FHVLCQVNRTWK*TPFQFHWNGIA
Trigger: GGCTATCCCATTCCAATGGAATTGAAAAGGAGTCAACTTCCAGGTGCGATTCACTTGGCAGAGAACATGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS GCA 72 bp CCTGAACTTTGTTTTATAACCAACCAGCTTGTTTTGTaGCTAGCCCGTACCCTGTCTCAAACATCACTCTTT +
Preference number: 6 (lower is better)
Translates to: PELCFITNQLVL*LARTLSQTSLF
Trigger: AAAGAGTGATGTTTGAGACAGGGTACGGGCTAGGCACAAAACAAGCTGGTTGGTTATAAAACAAAGTTCAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 72 bp AAACTTGTTCCGGAAAAGGAATCAAAATGGCGTTTCTaGATGTGCAAAGTTCATCAACTCCGCAGTCACTTC +
Preference number: 6 (lower is better)
Translates to: KLVPEKESKWRF*MCKVHQLRSHF
Trigger: GAAGTGACTGCGGAGTTGATGAACTTTGCACATCCAGAAACGCCATTTTGATTCCTTTTCCGGAACAAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000471433.5
ENST00000491191.5
CDS CCA 72 bp ATGCTATGCAGGCTTGGACTGCTCAGAAATCTCTTGTaGGAGCCACATTATTTTTCCTGCAGAACAGAATTA +
Preference number: 6 (lower is better)
Translates to: MLCRLGLLRNLL*EPHYFSCRTEL
Trigger: TAATTCTGTTCTGCAGGAAAAATAATGTGGCTCCCACAAGAGATTTCTGAGCAGTCCAAGCCTGCATAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CCA 72 bp CACGTCACACACACCAGATTTCAAAGAGTCAGTACATaGAAGCAAGAATGTGAACCACATCACTCACCATTT +
Preference number: 6 (lower is better)
Translates to: HVTHTRFQRVST*KQECEPHHSPF
Trigger: AAATGGTGAGTGATGTGGTTCACATTCTTGCTTCCATGTACTGACTCTTTGAAATCTGGTGTGTGTGACGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS TCA 72 bp TACTTGCAAACAAACTCCTTGAAACATACTGGGCAGTaGAAGACTTCATCAGCTTTCTTCTCCAAGTCACCT +
Preference number: 6 (lower is better)
Translates to: YLQTNSLKHTGQ*KTSSAFFSKSP
Trigger: AGGTGACTTGGAGAAGAAAGCTGATGAAGTCTTTCACTGCCCAGTATGTTTCAAGGAGTTTGTTTGCAAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000475946.5
ENST00000483150.1
CDS CCA 72 bp CAGTCCATACTTGCAAACAAACTCCTTGAAACATACTaGGCAGTGAAAGACTTCATCAGCTTTCTTCTCCAA +
Preference number: 6 (lower is better)
Translates to: QSILANKLLETY*AVKDFISFLLQ
Trigger: TTGGAGAAGAAAGCTGATGAAGTCTTTCACTGCCCAGTATGTTTCAAGGAGTTTGTTTGCAAGTATGGACTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000475946.5
ENST00000483150.1
CDS CAA 72 bp TGTACCAATTCCCAACAGAGATTTAATGTCATCACCTaGAACTCAGAGATGACCAGGGTCAATGAAGTACCA +
Preference number: 6 (lower is better)
Translates to: CTNSQQRFNVIT*NSEMTRVNEVP
Trigger: TGGTACTTCATTGACCCTGGTCATCTCTGAGTTCAAGGTGATGACATTAAATCTCTGTTGGGAATTGGTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 72 bp ATGGTAAAGAGGCAGCCAAAAATAGATCCAGCAGTTTaGATACCTCACAGCAGAGTTAAGGTACTTATCAGG +
Preference number: 6 (lower is better)
Translates to: MVKRQPKIDPAV*IPHSRVKVLIR
Trigger: CCTGATAAGTACCTTAACTCTGCTGTGAGGTATCAAAACTGCTGGATCTATTTTTGGCTGCCTCTTTACCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 90 bp GCTGTCCCTGTTTGGGCCACATATTCATGCATTGCTAATAGTCATTaGAGTTGCAACATCTTTTGCGAAGAAAATCTATCTGTTGTCCAA +
Preference number: 6 (lower is better)
Translates to: AVPVWATYSCIANSH*SCNIFCEENLSVVQ
Trigger: TTGGACAACAGATAGATTTTCTTCGCAAAAGATGTTGCAACTCAAATGACTATTAGCAATGCATGAATATGTGGCCCAAACAGGGACAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 90 bp CTTAGAACCCTAGGGTTCCCCCAACAATCTAAAGAAAGTGATGTGTaGTTCTGTTACATAAAGGTGTCGAGTTCCTTCACGTTTCTAAAT +
Preference number: 6 (lower is better)
Translates to: LRTLGFPQQSKESDV*FCYIKVSSSFTFLN
Trigger: ATTTAGAAACGTGAAGGAACTCGACACCTTTATGTAACAGAACAACACATCACTTTCTTTAGATTGTTGGGGGAACCCTAGGGTTCTAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 90 bp GAGGGAGTAATGGTAAAGAGGCAGCCAAAAATAGATCCAGCAGTTTaGATACCTCACAGCAGAGTTAAGGTACTTATCAGGAATAACTAT +
Preference number: 6 (lower is better)
Translates to: EGVMVKRQPKIDPAV*IPHSRVKVLIRNNY
Trigger: ATAGTTATTCCTGATAAGTACCTTAACTCTGCTGTGAGGTATCAAAACTGCTGGATCTATTTTTGGCTGCCTCTTTACCATTACTCCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 72 bp GAAAATGAGTCTGTGTTGACCTCTTGTCTTCTTCTCTaGGTAGTACTCGTTGACACTGTTTTCTTTGTGTTA +
Preference number: 6 (lower is better)
Translates to: ENESVLTSCLLL*VVLVDTVFFVL
Trigger: TAACACAAAGAAAACAGTGTCAACGAGTACTACCAAGAGAAGAAGACAAGAGGTCAACACAGACTCATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000334984.10
ENST00000349384.10
ENST00000379933.7
ENST00000379938.7
ENST00000471433.5
ENST00000475946.5
ENST00000483150.1
ENST00000491191.5
CDS CAA 72 bp GGAGTGGAGGGAAATGGAGTTGAGATTTATATGAGTTaGGATTTCCAACACTTTTTATTAAGGAACAATGGG +
Preference number: 6 (lower is better)
Translates to: GVEGNGVEIYMS*DFQHFLLRNNG
Trigger: CCCATTGTTCCTTAATAAAAAGTGTTGGAAATCCAAACTCATATAAATCTCAACTCCATTTCCCTCCACTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS TCA 72 bp TCATTTGAAACACAGTGGAGTGGAGGGAAATGGAGTTaGGATTTATATGAGTTTGGATTTCCAACACTTTTT +
Preference number: 6 (lower is better)
Translates to: SFETQWSGGKWS*DLYEFGFPTLF
Trigger: AAAAAGTGTTGGAAATCCAAACTCATATAAATCTCAACTCCATTTCCCTCCACTCCACTGTGTTTCAAATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS TCA 72 bp CAGATTTCAAAGAGTCAGTACATGGAAGCAAGAATGTaGACCACATCACTCACCATTTTTCTATTGATTATG +
Preference number: 6 (lower is better)
Translates to: QISKSQYMEARM*TTSLTIFLLIM
Trigger: CATAATCAATAGAAAAATGGTGAGTGATGTGGTTCACATTCTTGCTTCCATGTACTGACTCTTTGAAATCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000475946.5
CDS CAA 72 bp GTTTGGGCCACATATTCATGCATTGCTAATAGTCATTaGAGTTGCAACATCTTTTGCGAAGAAAATCTATCT +
Preference number: 6 (lower is better)
Translates to: VWATYSCIANSH*SCNIFCEENLS
Trigger: AGATAGATTTTCTTCGCAAAAGATGTTGCAACTCAAATGACTATTAGCAATGCATGAATATGTGGCCCAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475946.5