Pregenerated sensors for RRAS (Homo sapiens)
Ensembl gene IDs: ENSG00000126458Ensembl transcript IDs: ENST00000246792.4, ENST00000601532.1
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GTGTCCTGGGAGACCCAGATGAGGAAATTGAGGCTCAGTGAGGGCCTCAGGTCACCCGAGAGCTTGTGGTaGTTGCTTCTCTCTTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: VSWETQMRKLRLSEGLRSPESLW*LLLSCL Trigger: CAGGCAAGAGAGAAGCAACCACCACAAGCTCTCGGG...TGACCTGAGGCCCTCACTGAGCCTCAATTTCCTCATCTGGGTCTCCCAGGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| 3UTR-3UTR CCA 90 bp | CAGATGAGGAAATTGAGGCTCAGTGAGGGCCTCAGGTCACACAGCAAGGTGCGAAGTCCCGAGAGCTTGTaGTGGTTGCTTCTCTCTTGC | + |
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Preference number: 2 (lower is better) Translates to: QMRKLRLSEGLRSHSKVRSPESL*WLLLSC Trigger: GCAAGAGAGAAGCAACCACCACAAGCTCTCGGGACT...TCGCACCTTGCTGTGTGACCTGAGGCCCTCACTGAGCCTCAATTTCCTCATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR CCA 90 bp | AGGCTCAGTGAGGGCCTCAGGTCACACAGCAAGGTGCGAAGGCAGCTAGTCCCGCCCCGCCCTTCTTCCTaGGGGCACTGGGAGGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: RLSEGLRSHSKVRRQLVPPRPSS*GHWEGS Trigger: CGAGCCCTCCCAGTGCCCCCAGGAAGAAGGGCGGGG...CGGGACTAGCTGCCTTCGCACCTTGCTGTGTGACCTGAGGCCCTCACTGAGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR GCA 90 bp | CAGATGAGGAAATTGAGGCTCAGTGAGGGCCTCAGGTCACACAGCAAGGTGCGACGGACGCCGCCCCGCTaGTCATGTCGCCACCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: QMRKLRLSEGLRSHSKVRRTPPR*SCRHRC Trigger: GCAGCGGTGGCGACATGAGCAGCGGGGCGGCGTCCG...TCGCACCTTGCTGTGTGACCTGAGGCCCTCACTGAGCCTCAATTTCCTCATCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR GCA 90 bp | AAATTGAGGCTCAGTGAGGGCCTCAGGTCACACAGCAAGGTGCGAAGGCAGCTATGGTCAGCGCGCTCTTaGCCACGCCGCCGCCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: KLRLSEGLRSHSKVRRQLWSARS*PRRRRP Trigger: TGGGCGGCGGCGGCGTGGGCAAGAGCGCGCTGACCA...TAGCTGCCTTCGCACCTTGCTGTGTGACCTGAGGCCCTCACTGAGCCTCAATTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR GCA 90 bp | GTGCGAAGGCAGCTAGTCCCGAGAGCTTGTGGTGGTTGCTTCTCTCTTGCCTGGTGTCGCCACCGCTGCTaGTGCCTTCGCTACCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: VRRQLVPRACGGCFSLAWCRHRC*CLRYRL Trigger: CAGGCGGTAGCGAAGGCAGCAGCAGCGGTGGCGACA...CCAGGCAAGAGAGAAGCAACCACCACAAGCTCTCGGGACTAGCTGCCTTCGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR GCA 90 bp | CCTCAGGTCACACAGCAAGGTGCGAAGGCAGCTAGTCCCGAGAGCTTGTGGTGGACAGCCCGCACCAGCTaGTCAAAAGCCTCGTCCACG | + |
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Preference number: 4 (lower is better) Translates to: PQVTQQGAKAASPESLWWTARTS*SKASST Trigger: CGTGGACGAGGCTTTTGAGCAGCTGGTGCGGGCTGT...CCACCACAAGCTCTCGGGACTAGCTGCCTTCGCACCTTGCTGTGTGACCTGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR CCA 90 bp | TGGGAGACCCAGATGAGGAAATTGAGGCTCAGTGAGGGCCTCAGGTCACACAGCGCCCCGAACTCTTCCTaGCCCGCGGTGTCCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: WETQMRKLRLSEGLRSHSAPNSS*PAVSRM Trigger: CATCCTGGACACCGCGGGCCAGGAAGAGTTCGGGGC...GCTGTGTGACCTGAGGCCCTCACTGAGCCTCAATTTCCTCATCTGGGTCTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR CCA 90 bp | TCCTGGGAGACCCAGATGAGGAAATTGAGGCTCAGTGAGGGCCTCAGGTCACACTCTTCCTGGGGGCACTaGGAGGGCTCGGTGGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: SWETQMRKLRLSEGLRSHSSWGH*EGSVGA Trigger: AGCTCCCACCGAGCCCTCCCAGTGCCCCCAGGAAGA...GTGTGACCTGAGGCCCTCACTGAGCCTCAATTTCCTCATCTGGGTCTCCCAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR TCA 90 bp | CAGCAAGGTGCGAAGGCAGCTAGTCCCGAGAGCTTGTGGTGGTTGCTTCTCTCTAAGCCTCGTCCACGTTaGGACGCAGTTTGGCCGAGG | + |
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Preference number: 4 (lower is better) Translates to: QQGAKAASPESLWWLLLSKPRPR*DAVWPR Trigger: CCTCGGCCAAACTGCGTCTCAACGTGGACGAGGCTT...AGAGAGAAGCAACCACCACAAGCTCTCGGGACTAGCTGCCTTCGCACCTTGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR GCA 90 bp | CAGAAGAGGCCAGGAAGTAAGGGTGGGTATGTGATGTGTCCTGGGAGACCCAGATCATGTCGCCACCGCTaGTGCTGCCTTCGCTACCGC | + |
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Preference number: 4 (lower is better) Translates to: QKRPGSKGGYVMCPGRPRSCRHR*CCLRYR Trigger: GCGGTAGCGAAGGCAGCAGCAGCGGTGGCGACATGA...TCTGGGTCTCCCAGGACACATCACATACCCACCCTTACTTCCTGGCCTCTTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR CCA 90 bp | GTCACACAGCAAGGTGCGAAGGCAGCTAGTCCCGAGAGCTTGTGGTGGTTGCTTACCAGCAGGAAGCCGTaGCCAGCACGCATGTACTGC | + |
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Preference number: 4 (lower is better) Translates to: VTQQGAKAASPESLWWLLTSRKP*PARMYC Trigger: GCAGTACATGCGTGCTGGCCACGGCTTCCTGCTGGT...AAGCAACCACCACAAGCTCTCGGGACTAGCTGCCTTCGCACCTTGCTGTGTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR CCA 90 bp | GTGCGAAGGCAGCTAGTCCCGAGAGCTTGTGGTGGTTGCTTCTCTCTTGCCTGGACTGGGAGGGCTCGGTaGGAGCTCTTGTTCCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: VRRQLVPRACGGCFSLAWTGRAR*ELLFLV Trigger: TACCAGGAACAAGAGCTCCCACCGAGCCCTCCCAGT...CCAGGCAAGAGAGAAGCAACCACCACAAGCTCTCGGGACTAGCTGCCTTCGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR TCA 90 bp | CAGATGAGGAAATTGAGGCTCAGTGAGGGCCTCAGGTCACACAGCAAGGTGCGACCCGCAGAATCTGCGTaGAGAGCTTGCCCACCTCGT | + |
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Preference number: 4 (lower is better) Translates to: QMRKLRLSEGLRSHSKVRPAESA*RACPPR Trigger: ACGAGGTGGGCAAGCTCTTCACGCAGATTCTGCGGG...TCGCACCTTGCTGTGTGACCTGAGGCCCTCACTGAGCCTCAATTTCCTCATCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR TCA 90 bp | GTCACACAGCAAGGTGCGAAGGCAGCTAGTCCCGAGAGCTTGTGGTGGTTGCTTAGTTATATACAGCAGTaGCCCGGAGCCCCTCACCCC | + |
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Preference number: 4 (lower is better) Translates to: VTQQGAKAASPESLWWLLSYIQQ*PGAPHP Trigger: GGGGTGAGGGGCTCCGGGTCACTGCTGTATATAACT...AAGCAACCACCACAAGCTCTCGGGACTAGCTGCCTTCGCACCTTGCTGTGTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR GCA 90 bp | CAGATGAGGAAATTGAGGCTCAGTGAGGGCCTCAGGTCACACAGCAAGGTGCGACCAGCCGGGCTGGGATaGCATCCACACTGCAGATCT | + |
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Preference number: 4 (lower is better) Translates to: QMRKLRLSEGLRSHSKVRPAGLG*HPHCRS Trigger: AGATCTGCAGTGTGGATGGCATCCCAGCCCGGCTGG...TCGCACCTTGCTGTGTGACCTGAGGCCCTCACTGAGCCTCAATTTCCTCATCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR CCA 90 bp | GCCCAGAAGAGGCCAGGAAGTAAGGGTGGGTATGTGATGTGTCCTGGGAGACCCTGTACTGCTCTCTCATaGCCCCGAACTCTTCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: AQKRPGSKGGYVMCPGRPCTALS*PRTLPG Trigger: GCCAGGAAGAGTTCGGGGCCATGAGAGAGCAGTACA...GGGTCTCCCAGGACACATCACATACCCACCCTTACTTCCTGGCCTCTTCTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR CCA 90 bp | GTGTCCTGGGAGACCCAGATGAGGAAATTGAGGCTCAGTGAGGGCCTCAGGTCATGCTTCTCTCTTGCCTaGGCTACAGGAGGACGCAGG | + |
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Preference number: 4 (lower is better) Translates to: VSWETQMRKLRLSEGLRSCFSLA*ATGGRR Trigger: CCTGCGTCCTCCTGTAGCCCAGGCAAGAGAGAAGCA...TGACCTGAGGCCCTCACTGAGCCTCAATTTCCTCATCTGGGTCTCCCAGGACAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR TCA 90 bp | AAATTGAGGCTCAGTGAGGGCCTCAGGTCACACAGCAAGGTGCGAAGGCAGCTACGAAGTAGGACTGGATaGACTGGATGGTCAGCGCGC | + |
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Preference number: 4 (lower is better) Translates to: KLRLSEGLRSHSKVRRQLRSRTG*TGWSAR Trigger: GCGCGCTGACCATCCAGTTCATCCAGTCCTACTTCG...TAGCTGCCTTCGCACCTTGCTGTGTGACCTGAGGCCCTCACTGAGCCTCAATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR TCA 90 bp | GTCACACAGCAAGGTGCGAAGGCAGCTAGTCCCGAGAGCTTGTGGTGGTTGCTTGAAATTGAGGCTCAGTaGGGGCCTCAGGTCACACAG | + |
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Preference number: 4 (lower is better) Translates to: VTQQGAKAASPESLWWLLEIEAQ*GPQVTQ Trigger: CTGTGTGACCTGAGGCCCTCACTGAGCCTCAATTTC...AAGCAACCACCACAAGCTCTCGGGACTAGCTGCCTTCGCACCTTGCTGTGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR GCA 90 bp | CAGATGAGGAAATTGAGGCTCAGTGAGGGCCTCAGGTCACACAGCAAGGTGCGACCAGCACGCATGTACTaGTCTCTCATGGCCCCGAAC | + |
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Preference number: 4 (lower is better) Translates to: QMRKLRLSEGLRSHSKVRPARMY*SLMAPN Trigger: GTTCGGGGCCATGAGAGAGCAGTACATGCGTGCTGG...TCGCACCTTGCTGTGTGACCTGAGGCCCTCACTGAGCCTCAATTTCCTCATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR GCA 90 bp | AGGAAATTGAGGCTCAGTGAGGGCCTCAGGTCACACAGCAAGGTGCGAAGGCAGTTGACCCGCAGAATCTaGGTGAAGAGCTTGCCCACC | + |
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Preference number: 4 (lower is better) Translates to: RKLRLSEGLRSHSKVRRQLTRRI*VKSLPT Trigger: GGTGGGCAAGCTCTTCACGCAGATTCTGCGGGTCAA...CTGCCTTCGCACCTTGCTGTGTGACCTGAGGCCCTCACTGAGCCTCAATTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR CCA 90 bp | ACCCAGATGAGGAAATTGAGGCTCAGTGAGGGCCTCAGGTCACACAGCAAGGTGTCTGATCGGGGGACCTaGCGCTGTGACTCCAGATCT | + |
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Preference number: 4 (lower is better) Translates to: TQMRKLRLSEGLRSHSKVSDRGT*RCDSRS Trigger: AGATCTGGAGTCACAGCGCCAGGTCCCCCGATCAGA...CACCTTGCTGTGTGACCTGAGGCCCTCACTGAGCCTCAATTTCCTCATCTGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR CCA 90 bp | ACCCAGATGAGGAAATTGAGGCTCAGTGAGGGCCTCAGGTCACACAGCAAGGTGGGGAGCTCTTGTTCCTaGTATTTCCGGACAGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: TQMRKLRLSEGLRSHSKVGSSCS*YFRTAR Trigger: GCGGGCTGTCCGGAAATACCAGGAACAAGAGCTCCC...CACCTTGCTGTGTGACCTGAGGCCCTCACTGAGCCTCAATTTCCTCATCTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR TCA 90 bp | AAATTGAGGCTCAGTGAGGGCCTCAGGTCACACAGCAAGGTGCGAAGGCAGCTAGTAAGGGTGGGTATGTaGTGTGTCCTGGGAGACCCA | + |
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Preference number: 4 (lower is better) Translates to: KLRLSEGLRSHSKVRRQLVRVGM*CVLGDP Trigger: TGGGTCTCCCAGGACACATCACATACCCACCCTTAC...TAGCTGCCTTCGCACCTTGCTGTGTGACCTGAGGCCCTCACTGAGCCTCAATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR GCA 90 bp | GCCCAGAAGAGGCCAGGAAGTAAGGGTGGGTATGTGATGTGTCCTGGGAGACCCACCTCGTTGAAACTCTaGCGGTCGTTAATGGCGAAC | + |
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Preference number: 4 (lower is better) Translates to: AQKRPGSKGGYVMCPGRPTSLKL*RSLMAN Trigger: GTTCGCCATTAACGACCGGCAGAGTTTCAACGAGGT...GGGTCTCCCAGGACACATCACATACCCACCCTTACTTCCTGGCCTCTTCTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR GCA 90 bp | CAGATGAGGAAATTGAGGCTCAGTGAGGGCCTCAGGTCACACAGCAAGGTGCGATGGTTGCTTCTCTCTTaGCTGGGCTACAGGAGGACG | + |
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Preference number: 4 (lower is better) Translates to: QMRKLRLSEGLRSHSKVRWLLLS*LGYRRT Trigger: CGTCCTCCTGTAGCCCAGGCAAGAGAGAAGCAACCA...TCGCACCTTGCTGTGTGACCTGAGGCCCTCACTGAGCCTCAATTTCCTCATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR CCA 90 bp | AAATTGAGGCTCAGTGAGGGCCTCAGGTCACACAGCAAGGTGCGAAGGCAGCTACCCGAGAGCTTGTGGTaGTTGCTTCTCTCTTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: KLRLSEGLRSHSKVRRQLPESLW*LLLSCL Trigger: CAGGCAAGAGAGAAGCAACCACCACAAGCTCTCGGG...TAGCTGCCTTCGCACCTTGCTGTGTGACCTGAGGCCCTCACTGAGCCTCAATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR CCA 90 bp | AAATTGAGGCTCAGTGAGGGCCTCAGGTCACACAGCAAGGTGCGAAGGCAGCTAAGTCCCGAGAGCTTGTaGTGGTTGCTTCTCTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: KLRLSEGLRSHSKVRRQLSPESL*WLLLSC Trigger: GCAAGAGAGAAGCAACCACCACAAGCTCTCGGGACT...TAGCTGCCTTCGCACCTTGCTGTGTGACCTGAGGCCCTCACTGAGCCTCAATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR CCA 90 bp | GTGCGAAGGCAGCTAGTCCCGAGAGCTTGTGGTGGTTGCTTCTCTCTTGCCTGGGTATGTGATGTGTCCTaGGAGACCCAGATGAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: VRRQLVPRACGGCFSLAWVCDVS*ETQMRK Trigger: TTTCCTCATCTGGGTCTCCCAGGACACATCACATAC...CCAGGCAAGAGAGAAGCAACCACCACAAGCTCTCGGGACTAGCTGCCTTCGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR GCA 90 bp | CAGATGAGGAAATTGAGGCTCAGTGAGGGCCTCAGGTCACACAGCAAGGTGCGAGGATGCCATCCACACTaGAGATCTTCGTGTAGGAGT | + |
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Preference number: 4 (lower is better) Translates to: QMRKLRLSEGLRSHSKVRGCHPH*RSSCRS Trigger: ACTCCTACACGAAGATCTGCAGTGTGGATGGCATCC...TCGCACCTTGCTGTGTGACCTGAGGCCCTCACTGAGCCTCAATTTCCTCATCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS GCA 90 bp | AGCCCTCAGCCCCCACTGACACCACCCCCATCCATCATCCATCCTTaGCGCCCTCACTGTCCAGCCGGGCTGGGATGCCATCCACACTGC | + |
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Preference number: 5 (lower is better) Translates to: SPQPPLTPPPSIIHP*RPHCPAGLGCHPHC Trigger: GCAGTGTGGATGGCATCCCAGCCCGGCTGGACAGTGAGGGCGGCAAGGATGGATGATGGATGGGGGTGGTGTCAGTGGGGGCTGAGGGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000601532.1 |
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| CDS GCA 90 bp | GCGAAGGCAGCTAGTCCCGAGAGCTTGTGGTGGTTGCTTCTCTCTTaGCTGGGCTACAGGAGGACGCAGGGGCAGCCCCCGCCCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: AKAASPESLWWLLLS*LGYRRTQGQPPPFF Trigger: GAAGAAGGGCGGGGGCTGCCCCTGCGTCCTCCTGTAGCCCAGGCAAGAGAGAAGCAACCACCACAAGCTCTCGGGACTAGCTGCCTTCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS CCA 90 bp | AGGCAGCTAGTCCCGAGAGCTTGTGGTGGTTGCTTCTCTCTTGCCTaGGCTACAGGAGGACGCAGGGGCAGCCCCCGCCCTTCTTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: RQLVPRACGGCFSLA*ATGGRRGSPRPSSW Trigger: CCAGGAAGAAGGGCGGGGGCTGCCCCTGCGTCCTCCTGTAGCCCAGGCAAGAGAGAAGCAACCACCACAAGCTCTCGGGACTAGCTGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS GCA 90 bp | CACAGCAAGGTGCGAAGGCAGCTAGTCCCGAGAGCTTGTGGTGGTTaGTTCTCTCTTGCCTGGGCTACAGGAGGACGCAGGGGCAGCCCC | + |
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Preference number: 5 (lower is better) Translates to: HSKVRRQLVPRACGG*FSLAWATGGRRGSP Trigger: GGGGCTGCCCCTGCGTCCTCCTGTAGCCCAGGCAAGAGAGAAGCAACCACCACAAGCTCTCGGGACTAGCTGCCTTCGCACCTTGCTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR CAA 90 bp | TCCTGGGAGACCCAGATGAGGAAATTGAGGCTCAGTGAGGGCCTCAGGTCACACCCCACGACCACCAGCTaGTGTGTCTCGCTGGGCGGG | + |
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Preference number: 5 (lower is better) Translates to: SWETQMRKLRLSEGLRSHPTTTS*CVSLGG Trigger: CCCGCCCAGCGAGACACACAAGCTGGTGGTCGTGGG...GTGTGACCTGAGGCCCTCACTGAGCCTCAATTTCCTCATCTGGGTCTCCCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS TCA 90 bp | ATTTCCGGACAGCCCGCACCAGCTGCTCAAAAGCCTCGTCCACGTTaGGACGCAGTTTGGCCGAGGCCTCAAAGTAGGCCACGTGGTGGG | + |
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Preference number: 5 (lower is better) Translates to: ISGQPAPAAQKPRPR*DAVWPRPQSRPRGG Trigger: CCCACCACGTGGCCTACTTTGAGGCCTCGGCCAAACTGCGTCTCAACGTGGACGAGGCTTTTGAGCAGCTGGTGCGGGCTGTCCGGAAAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS CCA 90 bp | GTCACACAGCAAGGTGCGAAGGCAGCTAGTCCCGAGAGCTTGTGGTaGTTGCTTCTCTCTTGCCTGGGCTACAGGAGGACGCAGGGGCAG | + |
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Preference number: 5 (lower is better) Translates to: VTQQGAKAASPESLW*LLLSCLGYRRTQGQ Trigger: CTGCCCCTGCGTCCTCCTGTAGCCCAGGCAAGAGAGAAGCAACCACCACAAGCTCTCGGGACTAGCTGCCTTCGCACCTTGCTGTGTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS CCA 90 bp | CAGGTCACACAGCAAGGTGCGAAGGCAGCTAGTCCCGAGAGCTTGTaGTGGTTGCTTCTCTCTTGCCTGGGCTACAGGAGGACGCAGGGG | + |
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Preference number: 5 (lower is better) Translates to: QVTQQGAKAASPESL*WLLLSCLGYRRTQG Trigger: CCCCTGCGTCCTCCTGTAGCCCAGGCAAGAGAGAAGCAACCACCACAAGCTCTCGGGACTAGCTGCCTTCGCACCTTGCTGTGTGACCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR CAA 90 bp | AGGCTCAGTGAGGGCCTCAGGTCACACAGCAAGGTGCGAAGGCAGCTAGTCCCGGCTAGTCCCGAGAGCTaGTGGTGGTTGCTTCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: RLSEGLRSHSKVRRQLVPASPES*WWLLLS Trigger: AGAGAGAAGCAACCACCACAAGCTCTCGGGACTAGC...CGGGACTAGCTGCCTTCGCACCTTGCTGTGTGACCTGAGGCCCTCACTGAGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR CAA 90 bp | AAGGTGCGAAGGCAGCTAGTCCCGAGAGCTTGTGGTGGTTGCTTCTCTCTTGCCTGGGGACAGGAGGCGTaGGCAGAAGGCACACAGTGG | + |
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Preference number: 5 (lower is better) Translates to: KVRRQLVPRACGGCFSLAWGQEA*AEGTQW Trigger: CCACTGTGTGCCTTCTGCCAACGCCTCCTGTCCCCA...GGCAAGAGAGAAGCAACCACCACAAGCTCTCGGGACTAGCTGCCTTCGCACCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS CCA 90 bp | CCCCATCCATCATCCATCCTTGCCGCCCTCACTGTCCAGCCGGGCTaGGATGCCATCCACACTGCAGATCTTCGTGTAGGAGTCCTCAAT | + |
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Preference number: 5 (lower is better) Translates to: PHPSSILAALTVQPG*DAIHTADLRVGVLN Trigger: ATTGAGGACTCCTACACGAAGATCTGCAGTGTGGATGGCATCCCAGCCCGGCTGGACAGTGAGGGCGGCAAGGATGGATGATGGATGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601532.1 |
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| CDS-3UTR CAA 90 bp | TGGGAGACCCAGATGAGGAAATTGAGGCTCAGTGAGGGCCTCAGGTCACACAGCAAGTCGTCGCGGTCCTaGACCCGCAGAATCTGCGTG | + |
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Preference number: 5 (lower is better) Translates to: WETQMRKLRLSEGLRSHSKSSRS*TRRICV Trigger: CACGCAGATTCTGCGGGTCAAGGACCGCGACGACTT...GCTGTGTGACCTGAGGCCCTCACTGAGCCTCAATTTCCTCATCTGGGTCTCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS GCA 90 bp | ACCAACACAACGGGGAAGTCGTCGCGGTCCTTGACCCGCAGAATCTaGGTGAAGAGCTTGCCCACCTCGTTGAAACTCTGCCGGTCGTTA | + |
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Preference number: 5 (lower is better) Translates to: TNTTGKSSRSLTRRI*VKSLPTSLKLCRSL Trigger: TAACGACCGGCAGAGTTTCAACGAGGTGGGCAAGCTCTTCACGCAGATTCTGCGGGTCAAGGACCGCGACGACTTCCCCGTTGTGTTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000246792.4 ENST00000601532.1 |
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| CDS-3UTR CAA 90 bp | AGGAAATTGAGGCTCAGTGAGGGCCTCAGGTCACACAGCAAGGTGCGAAGGCAGGTGGTTGCTTCTCTCTaGCCTGGGCTACAGGAGGAC | + |
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Preference number: 5 (lower is better) Translates to: RKLRLSEGLRSHSKVRRQVVASL*PGLQED Trigger: GTCCTCCTGTAGCCCAGGCAAGAGAGAAGCAACCAC...CTGCCTTCGCACCTTGCTGTGTGACCTGAGGCCCTCACTGAGCCTCAATTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR CAA 90 bp | TCACACAGCAAGGTGCGAAGGCAGCTAGTCCCGAGAGCTTGTGGTGGTTGCTTCGAGAGCTTGTGGTGGTaGCTTCTCTCTTGCCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: SHSKVRRQLVPRACGGCFESLWW*LLSCLG Trigger: GCCCAGGCAAGAGAGAAGCAACCACCACAAGCTCTC...GAAGCAACCACCACAAGCTCTCGGGACTAGCTGCCTTCGCACCTTGCTGTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR CAA 90 bp | AAGGTGCGAAGGCAGCTAGTCCCGAGAGCTTGTGGTGGTTGCTTCTCTCTTGCCGACTCCAGATCTGCCTaGTTCCCGACCAACACAACG | + |
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Preference number: 5 (lower is better) Translates to: KVRRQLVPRACGGCFSLADSRSA*FPTNTT Trigger: CGTTGTGTTGGTCGGGAACAAGGCAGATCTGGAGTC...GGCAAGAGAGAAGCAACCACCACAAGCTCTCGGGACTAGCTGCCTTCGCACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR CAA 90 bp | AAATTGAGGCTCAGTGAGGGCCTCAGGTCACACAGCAAGGTGCGAAGGCAGCTAAAAGCCTCGTCCACGTaGAGACGCAGTTTGGCCGAG | + |
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Preference number: 5 (lower is better) Translates to: KLRLSEGLRSHSKVRRQLKASST*RRSLAE Trigger: CTCGGCCAAACTGCGTCTCAACGTGGACGAGGCTTT...TAGCTGCCTTCGCACCTTGCTGTGTGACCTGAGGCCCTCACTGAGCCTCAATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR CAA 90 bp | CAGATGAGGAAATTGAGGCTCAGTGAGGGCCTCAGGTCACACAGCAAGGTGCGAAGCTTGCCCACCTCGTaGAAACTCTGCCGGTCGTTA | + |
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Preference number: 5 (lower is better) Translates to: QMRKLRLSEGLRSHSKVRSLPTS*KLCRSL Trigger: TAACGACCGGCAGAGTTTCAACGAGGTGGGCAAGCT...TCGCACCTTGCTGTGTGACCTGAGGCCCTCACTGAGCCTCAATTTCCTCATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS-3UTR CAA 90 bp | GTGTCCTGGGAGACCCAGATGAGGAAATTGAGGCTCAGTGAGGGCCTCAGGTCAATCTGCGTGAAGAGCTaGCCCACCTCGTTGAAACTC | + |
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Preference number: 5 (lower is better) Translates to: VSWETQMRKLRLSEGLRSICVKS*PTSLKL Trigger: GAGTTTCAACGAGGTGGGCAAGCTCTTCACGCAGAT...TGACCTGAGGCCCTCACTGAGCCTCAATTTCCTCATCTGGGTCTCCCAGGACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS CAA 90 bp | GAGCCCTCAGCCCCCACTGACACCACCCCCATCCATCATCCATCCTaGCCGCCCTCACTGTCCAGCCGGGCTGGGATGCCATCCACACTG | + |
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Preference number: 6 (lower is better) Translates to: EPSAPTDTTPIHHPS*PPSLSSRAGMPSTL Trigger: CAGTGTGGATGGCATCCCAGCCCGGCTGGACAGTGAGGGCGGCAAGGATGGATGATGGATGGGGGTGGTGTCAGTGGGGGCTGAGGGCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000601532.1 |
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| CDS GCA 72 bp | GCTAGTCCCGAGAGCTTGTGGTGGTTGCTTCTCTCTTaGCTGGGCTACAGGAGGACGCAGGGGCAGCCCCCG | + |
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Preference number: 6 (lower is better) Translates to: ASPESLWWLLLS*LGYRRTQGQPP Trigger: CGGGGGCTGCCCCTGCGTCCTCCTGTAGCCCAGGCAAGAGAGAAGCAACCACCACAAGCTCTCGGGACTAGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS CAA 72 bp | GATCGGGGGACCTGGCGCTGTGACTCCAGATCTGCCTaGTTCCCGACCAACACAACGGGGAAGTCGTCGCGG | + |
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Preference number: 6 (lower is better) Translates to: DRGTWRCDSRSA*FPTNTTGKSSR Trigger: CCGCGACGACTTCCCCGTTGTGTTGGTCGGGAACAAGGCAGATCTGGAGTCACAGCGCCAGGTCCCCCGATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000246792.4 ENST00000601532.1 |
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| CDS CAA 90 bp | GAGGCTTCTGATCGGGGGACCTGGCGCTGTGACTCCAGATCTGCCTaGTTCCCGACCAACACAACGGGGAAGTCGTCGCGGTCCTTGACC | + |
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Preference number: 6 (lower is better) Translates to: EASDRGTWRCDSRSA*FPTNTTGKSSRSLT Trigger: GGTCAAGGACCGCGACGACTTCCCCGTTGTGTTGGTCGGGAACAAGGCAGATCTGGAGTCACAGCGCCAGGTCCCCCGATCAGAAGCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000246792.4 ENST00000601532.1 |
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| CDS CAA 90 bp | ACACAGCAAGGTGCGAAGGCAGCTAGTCCCGAGAGCTTGTGGTGGTaGCTTCTCTCTTGCCTGGGCTACAGGAGGACGCAGGGGCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: TQQGAKAASPESLWW*LLSCLGYRRTQGQP Trigger: GGGCTGCCCCTGCGTCCTCCTGTAGCCCAGGCAAGAGAGAAGCAACCACCACAAGCTCTCGGGACTAGCTGCCTTCGCACCTTGCTGTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS TCA 72 bp | CAGCCCGCACCAGCTGCTCAAAAGCCTCGTCCACGTTaGGACGCAGTTTGGCCGAGGCCTCAAAGTAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: QPAPAAQKPRPR*DAVWPRPQSRP Trigger: TGGCCTACTTTGAGGCCTCGGCCAAACTGCGTCTCAACGTGGACGAGGCTTTTGAGCAGCTGGTGCGGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS GCA 72 bp | GTGCGAAGGCAGCTAGTCCCGAGAGCTTGTGGTGGTTaGTTCTCTCTTGCCTGGGCTACAGGAGGACGCAGG | + |
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Preference number: 6 (lower is better) Translates to: VRRQLVPRACGG*FSLAWATGGRR Trigger: CCTGCGTCCTCCTGTAGCCCAGGCAAGAGAGAAGCAACCACCACAAGCTCTCGGGACTAGCTGCCTTCGCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS GCA 72 bp | CATCCTTGCCGCCCTCACTGTCCAGCCGGGCTGGGATaGCATCCACACTGCAGATCTTCGTGTAGGAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: HPCRPHCPAGLG*HPHCRSSCRSP Trigger: AGGACTCCTACACGAAGATCTGCAGTGTGGATGGCATCCCAGCCCGGCTGGACAGTGAGGGCGGCAAGGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601532.1 |
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| CDS CAA 72 bp | TTCCCGACCAACACAACGGGGAAGTCGTCGCGGTCCTaGACCCGCAGAATCTGCGTGAAGAGCTTGCCCACC | + |
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Preference number: 6 (lower is better) Translates to: FPTNTTGKSSRS*TRRICVKSLPT Trigger: GGTGGGCAAGCTCTTCACGCAGATTCTGCGGGTCAAGGACCGCGACGACTTCCCCGTTGTGTTGGTCGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000246792.4 ENST00000601532.1 |
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| CDS CAA 72 bp | GGTGCGAAGGCAGCTAGTCCCGAGAGCTTGTGGTGGTaGCTTCTCTCTTGCCTGGGCTACAGGAGGACGCAG | + |
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Preference number: 6 (lower is better) Translates to: GAKAASPESLWW*LLSCLGYRRTQ Trigger: CTGCGTCCTCCTGTAGCCCAGGCAAGAGAGAAGCAACCACCACAAGCTCTCGGGACTAGCTGCCTTCGCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS GCA 72 bp | ACGGGGAAGTCGTCGCGGTCCTTGACCCGCAGAATCTaGGTGAAGAGCTTGCCCACCTCGTTGAAACTCTGC | + |
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Preference number: 6 (lower is better) Translates to: TGKSSRSLTRRI*VKSLPTSLKLC Trigger: GCAGAGTTTCAACGAGGTGGGCAAGCTCTTCACGCAGATTCTGCGGGTCAAGGACCGCGACGACTTCCCCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000246792.4 ENST00000601532.1 |
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| CDS CCA 72 bp | CAAGGTGCGAAGGCAGCTAGTCCCGAGAGCTTGTGGTaGTTGCTTCTCTCTTGCCTGGGCTACAGGAGGACG | + |
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Preference number: 6 (lower is better) Translates to: QGAKAASPESLW*LLLSCLGYRRT Trigger: CGTCCTCCTGTAGCCCAGGCAAGAGAGAAGCAACCACCACAAGCTCTCGGGACTAGCTGCCTTCGCACCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS CCA 72 bp | CAGCAAGGTGCGAAGGCAGCTAGTCCCGAGAGCTTGTaGTGGTTGCTTCTCTCTTGCCTGGGCTACAGGAGG | + |
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Preference number: 6 (lower is better) Translates to: QQGAKAASPESL*WLLLSCLGYRR Trigger: CCTCCTGTAGCCCAGGCAAGAGAGAAGCAACCACCACAAGCTCTCGGGACTAGCTGCCTTCGCACCTTGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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| CDS CAA 90 bp | TCTGCCTTGTTCCCGACCAACACAACGGGGAAGTCGTCGCGGTCCTaGACCCGCAGAATCTGCGTGAAGAGCTTGCCCACCTCGTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: SALFPTNTTGKSSRS*TRRICVKSLPTSLK Trigger: TTTCAACGAGGTGGGCAAGCTCTTCACGCAGATTCTGCGGGTCAAGGACCGCGACGACTTCCCCGTTGTGTTGGTCGGGAACAAGGCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000246792.4 ENST00000601532.1 |
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| CDS CAA 72 bp | TCGCGGTCCTTGACCCGCAGAATCTGCGTGAAGAGCTaGCCCACCTCGTTGAAACTCTGCCGGTCGTTAATG | + |
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Preference number: 6 (lower is better) Translates to: SRSLTRRICVKS*PTSLKLCRSLM Trigger: CATTAACGACCGGCAGAGTTTCAACGAGGTGGGCAAGCTCTTCACGCAGATTCTGCGGGTCAAGGACCGCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000246792.4 ENST00000601532.1 |
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| CDS GCA 72 bp | TCTTGTTCCTGGTATTTCCGGACAGCCCGCACCAGCTaGTCAAAAGCCTCGTCCACGTTGAGACGCAGTTTG | + |
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Preference number: 6 (lower is better) Translates to: SCSWYFRTARTS*SKASSTLRRSL Trigger: CAAACTGCGTCTCAACGTGGACGAGGCTTTTGAGCAGCTGGTGCGGGCTGTCCGGAAATACCAGGAACAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000246792.4 |
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