RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RPS6KC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000136643

Ensembl transcript IDs: ENST00000366959.4, ENST00000366960.8, ENST00000468069.1, ENST00000490299.5, ENST00000491616.1, ENST00000543354.5, ENST00000543470.5, ENST00000614059.4, ENST00000615329.4

Found 306 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGACCTGGTCGATGGCAGATGGAAGCTGTACAGATGCTCCTGGAGTaGGGTTGGGCTCTCACACAGATCTCAAAAATGCAAAGAAGATTA +
Preference number: 1 (lower is better)
Translates to: GPGRWQMEAVQMLLE*GWALTQISKMQRRL
Trigger: TAATCTTCTTTGCATTTTTGAGATCTGTGTGAGAGCCCAACCCCACTCCAGGAGCATCTGTACAGCTTCCATCTGCCATCGACCAGGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR CCA 90 bp AGAGCATTTTCTGTTCCATTTAATTTGATGAGAGGACCTGGTCGATaGCAGATGGAAGCTGTACAGATGCTCCTGGAGTGGGGTTGGGCT +
Preference number: 1 (lower is better)
Translates to: RAFSVPFNLMRGPGR*QMEAVQMLLEWGWA
Trigger: AGCCCAACCCCACTCCAGGAGCATCTGTACAGCTTCCATCTGCCATCGACCAGGTCCTCTCATCAAATTAAATGGAACAGAAAATGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR CCA 90 bp GGTCGATGGCAGATGGAAGCTGTACAGATGCTCCTGGAGTGGGGTTaGGCTCTCACACAGATCTCAAAAATGCAAAGAAGATTAGAACAT +
Preference number: 1 (lower is better)
Translates to: GRWQMEAVQMLLEWG*ALTQISKMQRRLEH
Trigger: ATGTTCTAATCTTCTTTGCATTTTTGAGATCTGTGTGAGAGCCCAACCCCACTCCAGGAGCATCTGTACAGCTTCCATCTGCCATCGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR-3UTR CCA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTCTCCTGGAGTGGGGTTaGGCTCTCACACAGATCTCA +
Preference number: 2 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWILLEWG*ALTQIS
Trigger: TGAGATCTGTGTGAGAGCCCAACCCCACTCCAGGAG...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR-3UTR CCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGCTGGTCGATGGCAGATaGAAGCTGTACAGATGCTCC +
Preference number: 2 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWLVDGR*KLYRCS
Trigger: GGAGCATCTGTACAGCTTCCATCTGCCATCGACCAG...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR-3UTR CCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGAGAGGACCTGGTCGATaGCAGATGGAAGCTGTACAG +
Preference number: 2 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWRGPGR*QMEAVQ
Trigger: CTGTACAGCTTCCATCTGCCATCGACCAGGTCCTCT...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR-3UTR GCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATATGGAAGCTGTACAGATaGTCCTGGAGTGGGGTTGGG +
Preference number: 2 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIIWKLYR*SWSGVG
Trigger: CCCAACCCCACTCCAGGAGCATCTGTACAGCTTCCA...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR-3UTR CCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCCAGATGCTCCTGGAGTaGGGTTGGGCTCTCACACAG +
Preference number: 2 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLQMLLE*GWALTQ
Trigger: CTGTGTGAGAGCCCAACCCCACTCCAGGAGCATCTG...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR-3UTR CCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGCAGATGCTCCTGGAGTaGGGTTGGGCTCTCACACAG +
Preference number: 2 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLQMLLE*GWALTQ
Trigger: CTGTGTGAGAGCCCAACCCCACTCCAGGAGCATCTG...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR-3UTR CCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCTTTGATGAGAGGACCTaGTCGATGGCAGATGGAAGC +
Preference number: 2 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLFDERT*SMADGS
Trigger: GCTTCCATCTGCCATCGACCAGGTCCTCTCATCAAA...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR-3UTR CCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGCTCCTGGAGTGGGGTTaGGCTCTCACACAGATCTCA +
Preference number: 2 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLLLEWG*ALTQIS
Trigger: TGAGATCTGTGTGAGAGCCCAACCCCACTCCAGGAG...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR-3UTR CCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGCTGTACAGATGCTCCTaGAGTGGGGTTGGGCTCTCA +
Preference number: 2 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLLYRCS*SGVGLS
Trigger: TGAGAGCCCAACCCCACTCCAGGAGCATCTGTACAG...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR CAA 90 bp TGGTCGATGGCAGATGGAAGCTGTACAGATGCTCCTGGAGTGGGGTaGGGCTCTCACACAGATCTCAAAAATGCAAAGAAGATTAGAACA +
Preference number: 2 (lower is better)
Translates to: WSMADGSCTDAPGVG*GSHTDLKNAKKIRT
Trigger: TGTTCTAATCTTCTTTGCATTTTTGAGATCTGTGTGAGAGCCCAACCCCACTCCAGGAGCATCTGTACAGCTTCCATCTGCCATCGACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR-3UTR GCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGCCAACCTGGTGTTGTTaGAGCCTTTCAGCTGGGGTT +
Preference number: 2 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLPTWCC*SLSAGV
Trigger: AACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGG...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR-3UTR CCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGCTGGTCGATGGCAGATaGAAGCTGTACAGATGCTCC +
Preference number: 2 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLLVDGR*KLYRCS
Trigger: GGAGCATCTGTACAGCTTCCATCTGCCATCGACCAG...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR-3UTR CCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGAGAGGACCTGGTCGATaGCAGATGGAAGCTGTACAG +
Preference number: 2 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLRGPGR*QMEAVQ
Trigger: CTGTACAGCTTCCATCTGCCATCGACCAGGTCCTCT...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR-3UTR GCA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTAAATTTTTGCAACAATaGATAACTACAGGAGCTACC +
Preference number: 2 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWIKFLQQ*ITTGAT
Trigger: GGTAGCTCCTGTAGTTATGCATTGTTGCAAAAATTT...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR-3UTR TCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATAAAACAAAGTCAAGCATaGGAAGCAATGGTAGAAACT +
Preference number: 2 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIIKQSQA*EAMVET
Trigger: AGTTTCTACCATTGCTTCTCATGCTTGACTTTGTTT...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR-3UTR GCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATATTAGATGAGATCCTTTaGTTCTTAGTATACCAAGCC +
Preference number: 2 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIILDEIL*FLVYQA
Trigger: GGCTTGGTATACTAAGAAGCAAAGGATCTCATCTAA...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR-3UTR CCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTTGCAGCCTTTCAGCTaGGGTTTGGATTATAAGGGG +
Preference number: 2 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLLQPFS*GLDYKG
Trigger: CCCCTTATAATCCAAACCCCAGCTGAAAGGCTGCAA...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR-3UTR TCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCAAACAAAGTCAAGCATaGGAAGCAATGGTAGAAACT +
Preference number: 2 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLKQSQA*EAMVET
Trigger: AGTTTCTACCATTGCTTCTCATGCTTGACTTTGTTT...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR-3UTR GCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGAAATTTTTGCAACAATaGATAACTACAGGAGCTACC +
Preference number: 2 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLKFLQQ*ITTGAT
Trigger: GGTAGCTCCTGTAGTTATGCATTGTTGCAAAAATTT...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR-3UTR CAA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGCTCCTGGAGTGGGGTaGGGCTCTCACACAGATCTC +
Preference number: 3 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWAPGVG*GSHTDL
Trigger: GAGATCTGTGTGAGAGCCCAACCCCACTCCAGGAGC...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR GCA 72 bp ATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTaGAGCCTTTCAGCTGGGGTTTGGATTATAAGGGGG +
Preference number: 3 (lower is better)
Translates to: MILVTCSPTWCC*SLSAGVWIIRG
Trigger: CCCCCTTATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR-3UTR CAA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCCCCAACCTGGTGTTGTaGCAGCCTTTCAGCTGGGGT +
Preference number: 3 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLPNLVL*QPFSWG
Trigger: ACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGG...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR CCA 72 bp CGATGGCAGATGGAAGCTGTACAGATGCTCCTGGAGTaGGGTTGGGCTCTCACACAGATCTCAAAAATGCAA +
Preference number: 3 (lower is better)
Translates to: RWQMEAVQMLLE*GWALTQISKMQ
Trigger: TTGCATTTTTGAGATCTGTGTGAGAGCCCAACCCCACTCCAGGAGCATCTGTACAGCTTCCATCTGCCATCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR-3UTR CAA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTTCTGTTCCATTTAATTaGATGAGAGGACCTGGTCGA +
Preference number: 3 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWISVPFN*MRGPGR
Trigger: TCGACCAGGTCCTCTCATCAAATTAAATGGAACAGA...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR-3UTR CAA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGCTGGTGGTTTCTAACTaGGAAATAGTGACTTCTTCT +
Preference number: 3 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWLVVSN*EIVTSS
Trigger: AGAAGAAGTCACTATTTCCAAGTTAGAAACCACCAG...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR-3UTR CAA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCTCTGTTCCATTTAATTaGATGAGAGGACCTGGTCGA +
Preference number: 3 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLSVPFN*MRGPGR
Trigger: TCGACCAGGTCCTCTCATCAAATTAAATGGAACAGA...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR-3UTR CAA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGCAGGGGACTAGTGAGTaGAAATCTAGTTCCAGGGAG +
Preference number: 3 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLQGTSE*KSSSRE
Trigger: CTCCCTGGAACTAGATTTCAACTCACTAGTCCCCTG...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR TCA 72 bp GTCATTCTTGTGTCTCACCTGCATAAGTTCCTGTTATaGGGCCAGGGGACTAGTGAGTTGAAATCTAGTTCC +
Preference number: 3 (lower is better)
Translates to: VILVSHLHKFLL*GQGTSELKSSS
Trigger: GGAACTAGATTTCAACTCACTAGTCCCCTGGCCTCATAACAGGAACTTATGCAGGTGAGACACAAGAATGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATAACCCGCCCGGGATCATaGGGGAAACCCGGCGCCGCC +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIITRPGS*GKPGAA
Trigger: GGCGGCGCCGGGTTTCCCTCATGATCCCGGGCGGGT...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGTCGCTGGGGCTCGGTaGCAGTGTAGAAACGGGCCA +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWVAGAR*QCRNGP
Trigger: TGGCCCGTTTCTACACTGTCACCGAGCCCCAGCGAC...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTCTCTCAGCTGTGTGCTaGGGCTGTCACTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWILSAVC*GCHCQQ
Trigger: CTGCTGACAGTGACAGCCCCAGCACACAGCTGAGAG...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGCAGATGCTCCTGGAGTaGGGTTGGGCTCTCACACAG +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWQMLLE*GWALTQ
Trigger: CTGTGTGAGAGCCCAACCCCACTCCAGGAGCATCTG...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTCAGATGCTCCTGGAGTaGGGTTGGGCTCTCACACAG +
Preference number: 4 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWIQMLLE*GWALTQ
Trigger: CTGTGTGAGAGCCCAACCCCACTCCAGGAGCATCTG...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCGTCGCTGGGGCTCGGTaGCAGTGTAGAAACGGGCCA +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLVAGAR*QCRNGP
Trigger: TGGCCCGTTTCTACACTGTCACCGAGCCCCAGCGAC...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGTCGACGGGTAGGGCTTaGCTCTCCTTGAACACCTTC +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWSTGRA*LSLNTF
Trigger: GAAGGTGTTCAAGGAGAGTCAAGCCCTACCCGTCGA...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGTACTTTCTGCCCGCATaGGGTACTCGGCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWYFLPA*GTRLFF
Trigger: GAAGAACAGCCGAGTACCTCATGCGGGCAGAAAGTA...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCTCACCCCAAGGACTCTaGAGGCCTTCAGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLSPQGL*RPSAPR
Trigger: CCGAGGAGCTGAAGGCCTTCAGAGTCCTTGGGGTGA...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGAAGCTACTGCTGTCCTaGGGACTAGAAGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWKLLLS*GLEVGC
Trigger: GCAGCCAACTTCTAGTCCTCAGGACAGCAGTAGCTT...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGAAGAACTTCAGCTCGTaGGCTCTCAGCTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWKNFSS*ALSCVL
Trigger: CAGCACACAGCTGAGAGCTCACGAGCTGAAGTTCTT...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGCGGCGGCGCCTCAGCTaGACAGCTCTGCTTCCGGGT +
Preference number: 4 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLRRRLS*TALLPG
Trigger: ACCCGGAAGCAGAGCTGTGCAGCTGAGGCGCCGCCG...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366960.8
CDS-3UTR CCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGACCTGCTCCCCAACCTaGTGTTGTTGCAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWTCSPT*CCCSLS
Trigger: TGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGATCAATGAGGGAATCTaGGTGAGCTTCAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWINEGI*VSFSRT
Trigger: GGTCCTGCTGAAGCTCACTCAGATTCCCTCATTGAT...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCGCACACAGCGGGGGATaGTGGTCTTTCTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLAHSGG*WSFCSC
Trigger: GCAGGAACAGAAAGACCATCATCCCCCGCTGTGTGC...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTGTTGGCTGCTGCAGGTaGACTTTTGCAAGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWIVGCCR*TFASVG
Trigger: ACCTACACTTGCAAAAGTTCACCTGCAGCAGCCAAC...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGTTTGCAGTTACTGCTaGCTCAACCACTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWVCSYC*LNHSKS
Trigger: GGACTTGGAGTGGTTGAGTCAGCAGTAACTGCAAAC...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGAACTGCAAGAGCTGTTaGATGAGTGAGCGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWNCKSC*MSERAS
Trigger: AGAGGCTCGCTCACTCATTCAACAGCTCTTGCAGTT...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTACTAGAGATACTTTCTaGCCGCATGAGGTACTCGGC +
Preference number: 4 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWITRDTF*PHEVLG
Trigger: GCCGAGTACCTCATGCGGGCAGAAAGTATCTCTAGT...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGCCACCTTCCGCATGCTaGAGCACAAGAAATACTGAC +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWPPSAC*STRNTD
Trigger: GTCAGTATTTCTTGTGCTGCAGCATGCGGAAGGTGG...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCCTCTCAGCTGTGTGCTaGGGCTGTCACTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLLSAVC*GCHCQQ
Trigger: CTGCTGACAGTGACAGCCCCAGCACACAGCTGAGAG...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATACTCCTGGAGTGGGGTTaGGCTCTCACACAGATCTCA +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIILLEWG*ALTQIS
Trigger: TGAGATCTGTGTGAGAGCCCAACCCCACTCCAGGAG...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATACTGTACAGATGCTCCTaGAGTGGGGTTGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIILYRCS*SGVGLS
Trigger: TGAGAGCCCAACCCCACTCCAGGAGCATCTGTACAG...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGTTTGATGAGAGGACCTaGTCGATGGCAGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWFDERT*SMADGS
Trigger: GCTTCCATCTGCCATCGACCAGGTCCTCTCATCAAA...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTTTTGATGAGAGGACCTaGTCGATGGCAGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWIFDERT*SMADGS
Trigger: GCTTCCATCTGCCATCGACCAGGTCCTCTCATCAAA...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGGCTTGACTCTCCTTaGACACCTTCTAGGAGTAAA +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWGLDSP*TPSRSK
Trigger: TTTACTCCTAGAAGGTGTTCAAGGAGAGTCAAGCCC...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTGGGCTTGACTCTCCTTaGACACCTTCTAGGAGTAAA +
Preference number: 4 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWIGLDSP*TPSRSK
Trigger: TTTACTCCTAGAAGGTGTTCAAGGAGAGTCAAGCCC...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCTCGACGGGTAGGGCTTaGCTCTCCTTGAACACCTTC +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLSTGRA*LSLNTF
Trigger: GAAGGTGTTCAAGGAGAGTCAAGCCCTACCCGTCGA...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCTCAGCTGCCCATCTTTaGATGCAGCCCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLSAAHL*MQPSGM
Trigger: CATCCCAGAGGGCTGCATTCAAAGATGGGCAGCTGA...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGTTGCCACCTTCCGCATaGTGCAGCACAAGAAATACT +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWLPPSA*CSTRNT
Trigger: AGTATTTCTTGTGCTGCAGCATGCGGAAGGTGGCAA...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGCTGCCCATCTTTGAATaGAGCCCTCTGGGATGTAAA +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWLPIFE*SPLGCK
Trigger: TTTACATCCCAGAGGGCTGCATTCAAAGATGGGCAG...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTCTGCCCATCTTTGAATaGAGCCCTCTGGGATGTAAA +
Preference number: 4 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWILPIFE*SPLGCK
Trigger: TTTACATCCCAGAGGGCTGCATTCAAAGATGGGCAG...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGTACCACCATTTCAGCTaGCCATCTTTGAATGCAGCC +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWYHHFS*PSLNAA
Trigger: GGCTGCATTCAAAGATGGGCAGCTGAAATGGTGGTA...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTCTGAGGACTAGAAGTTaGCTGCTGCAGGTGAACTTT +
Preference number: 4 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWILRTRS*LLQVNF
Trigger: AAAGTTCACCTGCAGCAGCCAACTTCTAGTCCTCAG...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTAGAATCTGGCCACTTTaGAGAGCTATCTTGGCCATC +
Preference number: 4 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWIRIWPL*RAILAI
Trigger: GATGGCCAAGATAGCTCTCCAAAGTGGCCAGATTCT...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCCTGTACAGATGCTCCTaGAGTGGGGTTGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLLYRCS*SGVGLS
Trigger: TGAGAGCCCAACCCCACTCCAGGAGCATCTGTACAG...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTCACCCCAAGGACTCTaGAGGCCTTCAGCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLSPQGL*RPSAPR
Trigger: CCGAGGAGCTGAAGGCCTTCAGAGTCCTTGGGGTGA...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCGCAAGAGCTGTTGAATaGGTGAGCGAGCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLARAVE*VSEPLQ
Trigger: CTGAAGAGGCTCGCTCACTCATTCAACAGCTCTTGC...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGATTGTGTCAACAGACTaGCATGGCAACCATCTGTTG +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWIVSTD*HGNHLL
Trigger: CAACAGATGGTTGCCATGTCAGTCTGTTGACACAAT...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATAGCTTCGGCTTTAAACTaGCAGGAAAGAGGCTACGAC +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIIASALN*QERGYD
Trigger: GTCGTAGCCTCTTTCCTGGCAGTTTAAAGCCGAAGC...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATACCACCTTCCGCATGCTaGAGCACAAGAAATACTGAC +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIIPPSAC*STRNTD
Trigger: GTCAGTATTTCTTGTGCTGCAGCATGCGGAAGGTGG...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGTCCCAGGAGTTCACTTaGGCTATCCTTACTGTCTAT +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWSQEFT*AILTVY
Trigger: ATAGACAGTAAGGATAGCGCAAGTGAACTCCTGGGA...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTCACTCAGTTCCTCTATaGCTTTCTCCTCATGTGCTT +
Preference number: 4 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWIHSVPL*LSPHVL
Trigger: AAGCACATGAGGAGAAAGGCATAGAGGAACTGAGTG...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGCCTGGGATCCTCCTGTaGATAGTGTTTCTCTGTTAT +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWPGILL*IVFLCY
Trigger: ATAACAGAGAAACACTATGCACAGGAGGATCCCAGG...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTCCTGGGATCCTCCTGTaGATAGTGTTTCTCTGTTAT +
Preference number: 4 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWIPGILL*IVFLCY
Trigger: ATAACAGAGAAACACTATGCACAGGAGGATCCCAGG...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCATGATCCTGGTGACCTaGTCCCCAACCTGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLMILVT*SPTWCC
Trigger: ACAACACCAGGTTGGGGAGCAGGTCACCAGGATCAT...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGTTTGGAGAGCTATCTTaGCCATCATCTTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWFGELS*PSSSWL
Trigger: CAACCAGGAAGATGATGGCCAAGATAGCTCTCCAAA...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTTTTGGAGAGCTATCTTaGCCATCATCTTCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWIFGELS*PSSSWL
Trigger: CAACCAGGAAGATGATGGCCAAGATAGCTCTCCAAA...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGAGAACTAACTGCTTCTaGGTCATCGTTGGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWRTNCF*VIVGEE
Trigger: TTCTTCCCCAACGATGACCCAGAAGCAGTTAGTTCT...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATATTGAATGCAGCCCTCTaGGATGTAAAACCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIILNAAL*DVKPGG
Trigger: GCCTCCAGGTTTTACATCCCAGAGGGCTGCATTCAA...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCCTGGTCGATGGCAGATaGAAGCTGTACAGATGCTCC +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLLVDGR*KLYRCS
Trigger: GGAGCATCTGTACAGCTTCCATCTGCCATCGACCAG...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCACCTGCTCCCCAACCTaGTGTTGTTGCAGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLTCSPT*CCCSLS
Trigger: TGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCAAACAACCCGGGCGGTaGCCTTATATACTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLKQPGR*PYILCS
Trigger: GCTACACAGTATATAAGGTCACCGCCCGGGTTGTTT...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366960.8
CDS-3UTR TCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCATCAATGAGGGAATCTaGGTGAGCTTCAGCAGGACC +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLINEGI*VSFSRT
Trigger: GGTCCTGCTGAAGCTCACTCAGATTCCCTCATTGAT...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATAACCACTCCAAGTCCTTaGAACTTAGGATCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIITTPSP*NLGSEL
Trigger: CAGCTCAGATCCTAAGTTTCAAGGACTTGGAGTGGT...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCCCAGAGTCTTGCCAGTaGGAAGTTCAAAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLPESCQ*EVQRGQ
Trigger: CTGTCCTCTTTGAACTTCTCACTGGCAAGACTCTGG...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCAACTGCAAGAGCTGTTaGATGAGTGAGCGAGCCTCT +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLNCKSC*MSERAS
Trigger: AGAGGCTCGCTCACTCATTCAACAGCTCTTGCAGTT...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATAGTCGTTCCAGAGGATTaGACTGCAAGAGCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIIVVPED*TARAVE
Trigger: TTCAACAGCTCTTGCAGTTCAATCCTCTGGAACGAC...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGAGTGATGTCATTTTaGCTGAACTATGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWGVMSF*LNYDPG
Trigger: ACCAGGATCATAGTTCAGTCAAAATGACATCACTCC...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATATACCACCATTTCAGCTaGCCATCTTTGAATGCAGCC +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIIYHHFS*PSLNAA
Trigger: GGCTGCATTCAAAGATGGGCAGCTGAAATGGTGGTA...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATAAGTTTCTTCAGTGATTaGTCCAACCTCTGGGGCACA +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIISFFSD*SNLWGT
Trigger: TGTGCCCCAGAGGTTGGAGCAATCACTGAAGAAACT...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCCTTCTGGGTCATCGTTaGGGAAGAACTTCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLLLGHR*GRTSAR
Trigger: ACGAGCTGAAGTTCTTCCCCAACGATGACCCAGAAG...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTTTATACTATAGGATTTaGGCCCAGAGGGATCACTCA +
Preference number: 4 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWILYYRI*AQRDHS
Trigger: TGAGTGATCCCTCTGGGCCCAAATCCTATAGTATAA...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTGTCTCAGAGTCTCTCTaGAATAAAGAAGTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWIVSESL*NKEVGS
Trigger: GGAACCAACTTCTTTATTCCAGAGAGACTCTGAGAC...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTAGTACATTCTCTCTATaGCATCGCTGTCACAGGAAT +
Preference number: 4 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWISTFSL*HRCHRN
Trigger: ATTCCTGTGACAGCGATGCCATAGAGAGAATGTACT...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCGATTGCTCCAACCTCTaGGGCACAGTACATTCTCTC +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLDCSNL*GTVHSL
Trigger: GAGAGAATGTACTGTGCCCCAGAGGTTGGAGCAATC...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTGTCAACAGACTGACATaGCAACCATCTGTTGACATT +
Preference number: 4 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWIVNRLT*QPSVDI
Trigger: AATGTCAACAGATGGTTGCCATGTCAGTCTGTTGAC...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGTCAACAGACTGACATaGCAACCATCTGTTGACATT +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWVNRLT*QPSVDI
Trigger: AATGTCAACAGATGGTTGCCATGTCAGTCTGTTGAC...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCATGAGGGAATCTGAGTaGGCTTCAGCAGGACCAATT +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLMRESE*ASAGPI
Trigger: AATTGGTCCTGCTGAAGCTCACTCAGATTCCCTCAT...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGCTAATGGGAGAATTTTaGTTGGAAGCCATTCCATCA +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWLMGEF*LEAIPS
Trigger: TGATGGAATGGCTTCCAATCAAAATTCTCCCATTAG...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTCTAATGGGAGAATTTTaGTTGGAAGCCATTCCATCA +
Preference number: 4 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWILMGEF*LEAIPS
Trigger: TGATGGAATGGCTTCCAATCAAAATTCTCCCATTAG...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATACTGACTCCTCAGAGATaGTGTACTTATGCAGACACA +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIILTPQR*CTYADT
Trigger: TGTGTCTGCATAAGTACATCATCTCTGAGGAGTCAG...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATACTGCTAATGGTGTCCTaGGCTTTAAACTCTACCTTG +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIILLMVS*ALNSTL
Trigger: CAAGGTAGAGTTTAAAGCTCAGGACACCATTAGCAG...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCACCACTCCAAGTCCTTaGAACTTAGGATCTGAGCTG +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLTTPSP*NLGSEL
Trigger: CAGCTCAGATCCTAAGTTTCAAGGACTTGGAGTGGT...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATAATTGTGTCAACAGACTaGCATGGCAACCATCTGTTG +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIIIVSTD*HGNHLL
Trigger: CAACAGATGGTTGCCATGTCAGTCTGTTGACACAAT...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTCCAAATAATCTCTCTTaGCAAGCTTCGGCTTTAAAC +
Preference number: 4 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWIPNNLS*QASALN
Trigger: GTTTAAAGCCGAAGCTTGGCAAGAGAGATTATTTGG...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCTTGCCACCTTCCGCATaGTGCAGCACAAGAAATACT +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLLPPSA*CSTRNT
Trigger: AGTATTTCTTGTGCTGCAGCATGCGGAAGGTGGCAA...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATAGCCTTTCTCCTCATGTaGTTGGCATTGTTCAGTACT +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIIAFLLM*LALFST
Trigger: AGTACTGAACAATGCCAAGCACATGAGGAGAAAGGC...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCAGTTTCTTCAGTGATTaGTCCAACCTCTGGGGCACA +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLSFFSD*SNLWGT
Trigger: TGTGCCCCAGAGGTTGGAGCAATCACTGAAGAAACT...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTGGAAGCTGTACAGATaGTCCTGGAGTGGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLWKLYR*SWSGVG
Trigger: CCCAACCCCACTCCAGGAGCATCTGTACAGCTTCCA...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCAGAATCTGGCCACTTTaGAGAGCTATCTTGGCCATC +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLRIWPL*RAILAI
Trigger: GATGGCCAAGATAGCTCTCCAAAGTGGCCAGATTCT...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGAGTATTTATTCCTGCTaGATGGCATTCAACCAGAGT +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWSIYSC*MAFNQS
Trigger: ACTCTGGTTGAATGCCATCCAGCAGGAATAAATACT...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCCAGGAAAGGTATCAATaGGGGAATCTGAGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLQERYQ*GNLSEL
Trigger: AAGCTCACTCAGATTCCCTCATTGATACCTTTCCTG...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTACTTTCTGCCCGCATaGGGTACTCGGCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLYFLPA*GTRLFF
Trigger: GAAGAACAGCCGAGTACCTCATGCGGGCAGAAAGTA...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCCTGACTCCTCAGAGATaGTGTACTTATGCAGACACA +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLLTPQR*CTYADT
Trigger: TGTGTCTGCATAAGTACATCATCTCTGAGGAGTCAG...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATACAGCACAAGAAATACTaGCTCCTCAGAGATGATGTA +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIIQHKKY*LLRDDV
Trigger: TACATCATCTCTGAGGAGTCAGTATTTCTTGTGCTG...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGAAATTTACTGATATATaGCCACAGTTTGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWKFTDI*PQFATF
Trigger: GAAGGTGGCAAACTGTGGTCATATATCAGTAAATTT...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATATCTACTGAGGGAATCTaGTGTTCTTGGAGAACTAAC +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIISTEGI*CSWRTN
Trigger: GTTAGTTCTCCAAGAACATCAGATTCCCTCAGTAGA...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGATGTTCAAAGTAGTGTaGGTATTTATTCCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWMFKVV*VFIPAG
Trigger: TCCAGCAGGAATAAATACTCACACTACTTTGAACAT...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGAAACAAAGTCAAGCATaGGAAGCAATGGTAGAAACT +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWKQSQA*EAMVET
Trigger: AGTTTCTACCATTGCTTCTCATGCTTGACTTTGTTT...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTAAACAAAGTCAAGCATaGGAAGCAATGGTAGAAACT +
Preference number: 4 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWIKQSQA*EAMVET
Trigger: AGTTTCTACCATTGCTTCTCATGCTTGACTTTGTTT...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATAGAAAAGGGGAGAAACTaGAGCAATGGAATTGTGTCA +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIIEKGRN*SNGIVS
Trigger: TGACACAATTCCATTGCTTCAGTTTCTCCCCTTTTC...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATATGGTCTTTCTGTTCCTaGTGTATTCACTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIIWSFCS*CIHCFS
Trigger: GGAAAAGCAGTGAATACAGCAGGAACAGAAAGACCA...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGTTAGATGAGATCCTTTaGTTCTTAGTATACCAAGCC +
Preference number: 4 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWLDEIL*FLVYQA
Trigger: GGCTTGGTATACTAAGAAGCAAAGGATCTCATCTAA...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGATGATCCTGGTGACCTaGTCCCCAACCTGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLMILVT*SPTWCC
Trigger: ACAACACCAGGTTGGGGAGCAGGTCACCAGGATCAT...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATACCAGCTCTAAGTACTTaGAGATTTCCTACTAGTCCT +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIIPALST*RFPTSP
Trigger: AGGACTAGTAGGAAATCTGCAAGTACTTAGAGCTGG...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATAAAAGAGCAGGAATATTaGCAGAGAACTGTAGCAGGT +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIIKEQEY*QRTVAG
Trigger: ACCTGCTACAGTTCTCTGCCAATATTCCTGCTCTTT...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATATTCTCCTCATGTGCTTaGCATTGTTCAGTACTAAGC +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIIFSSCA*HCSVLS
Trigger: GCTTAGTACTGAACAATGCCAAGCACATGAGGAGAA...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATACTACAAATAACATCCTaGGATCCTCCTGTGCATAGT +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIILQITS*DPPVHS
Trigger: ACTATGCACAGGAGGATCCCAGGATGTTATTTGTAG...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCCTTTCAGCTGGGGTTTaGATTATAAGGGGGCCAAAA +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLLSAGV*IIRGPK
Trigger: TTTTGGCCCCCTTATAATCCAAACCCCAGCTGAAAG...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCCAGCACAAGAAATACTaGCTCCTCAGAGATGATGTA +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLQHKKY*LLRDDV
Trigger: TACATCATCTCTGAGGAGTCAGTATTTCTTGTGCTG...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGCCAGAGTCTTGCCAGTaGGAAGTTCAAAGAGGACAG +
Preference number: 4 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLPESCQ*EVQRGQ
Trigger: CTGTCCTCTTTGAACTTCTCACTGGCAAGACTCTGG...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCGGAGTGATGTCATTTTaGCTGAACTATGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLGVMSF*LNYDPG
Trigger: ACCAGGATCATAGTTCAGTCAAAATGACATCACTCC...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGCATAAGTTCCTGTTATaGGGCCAGGGGACTAGTGAG +
Preference number: 4 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLHKFLL*GQGTSE
Trigger: CTCACTAGTCCCCTGGCCTCATAACAGGAACTTATG...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGCCAGATCACTGTCACTaGAGAAGCCTTCCGTACTAC +
Preference number: 4 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLPDHCH*RSLPYY
Trigger: GTAGTACGGAAGGCTTCTCCAGTGACAGTGATCTGG...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCTTCTCCTCATGTGCTTaGCATTGTTCAGTACTAAGC +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLFSSCA*HCSVLS
Trigger: GCTTAGTACTGAACAATGCCAAGCACATGAGGAGAA...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATACTGGGATGTAAAACCTaGAGGCTAGTGCTAATTTTT +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIILGCKT*RLVLIF
Trigger: AAAAATTAGCACTAGCCTCCAGGTTTTACATCCCAG...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTTGAATGCAGCCCTCTaGGATGTAAAACCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLLNAAL*DVKPGG
Trigger: GCCTCCAGGTTTTACATCCCAGAGGGCTGCATTCAA...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCTCTCCTGAACTACTATaGTCAACAGCTGCTACAAAT +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLSPELL*STAATN
Trigger: ATTTGTAGCAGCTGTTGATCATAGTAGTTCAGGAGA...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCCAAAGACATATCTCCTaGACTACTATGATCAACAGC +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLQRHIS*TTMINS
Trigger: GCTGTTGATCATAGTAGTTCAGGAGATATGTCTTTG...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATACTAAAATACGTTAGCTaGATGTGTCCTCTATCATTC +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIILKYVS*MCPLSF
Trigger: GAATGATAGAGGACACATTCAGCTAACGTATTTTAG...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCCCAAATAATCTCTCTTaGCAAGCTTCGGCTTTAAAC +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLPNNLS*QASALN
Trigger: GTTTAAAGCCGAAGCTTGGCAAGAGAGATTATTTGG...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGGTCAGCAGCAAGGTGTaGTGGGAAGCTTTTAATAGC +
Preference number: 4 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLVSSKV*WEAFNS
Trigger: GCTATTAAAAGCTTCCCAGCACACCTTGCTGCTGAC...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTCTTGGAGAACTAACTaGTTCTGGGTCATCGTTGGG +
Preference number: 4 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLSWRTN*FWVIVG
Trigger: CCCAACGATGACCCAGAAGCAGTTAGTTCTCCAAGA...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCTTCTTGTGTCTCACCTaGATAAGTTCCTGTTATGAG +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLFLCLT*ISSCYE
Trigger: CTCATAACAGGAACTTATGCAGGTGAGACACAAGAA...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATATGGGAGAATTTTGATTaGAAGCCATTCCATCATCTA +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIIWENFD*KPFHHL
Trigger: TAGATGATGGAATGGCTTCCAATCAAAATTCTCCCA...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATAGTCATCTTGAGAACTTaGAGTAAGACTACTCTTCAA +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIIVILRT*SKTTLQ
Trigger: TTGAAGAGTAGTCTTACTCCAAGTTCTCAAGATGAC...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCAGCACTGTCTCCATCTaGAAGAGTAAAGAATGGTTT +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLSTVSI*KSKEWF
Trigger: AAACCATTCTTTACTCTTCCAGATGGAGACAGTGCT...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCAGTATTTATTCCTGCTaGATGGCATTCAACCAGAGT +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLSIYSC*MAFNQS
Trigger: ACTCTGGTTGAATGCCATCCAGCAGGAATAAATACT...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCTTCAGAGACACATTCTaGCATGTTCAAAGTAGTGTG +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLFRDTF*HVQSSV
Trigger: CACACTACTTTGAACATGCCAGAATGTGTCTCTGAA...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGGCACACAGCGGGGGATaGTGGTCTTTCTGTTCCTGC +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKAHSGG*WSFCSC
Trigger: GCAGGAACAGAAAGACCATCATCCCCCGCTGTGTGC...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCAAATTTACTGATATATaGCCACAGTTTGCCACCTTC +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLKFTDI*PQFATF
Trigger: GAAGGTGGCAAACTGTGGTCATATATCAGTAAATTT...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCTTAGATGAGATCCTTTaGTTCTTAGTATACCAAGCC +
Preference number: 4 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLLDEIL*FLVYQA
Trigger: GGCTTGGTATACTAAGAAGCAAAGGATCTCATCTAA...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATAAAATTTTTGCAACAATaGATAACTACAGGAGCTACC +
Preference number: 4 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIIKFLQQ*ITTGAT
Trigger: GGTAGCTCCTGTAGTTATGCATTGTTGCAAAAATTT...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGCTTTCAGCTGGGGTTTaGATTATAAGGGGGCCAAAA +
Preference number: 4 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLLSAGV*IIRGPK
Trigger: TTTTGGCCCCCTTATAATCCAAACCCCAGCTGAAAG...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGCTCTGGATTTCTTCGTaGAACAACCCGGGCGGTGAC +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKLWISS*NNPGGD
Trigger: GTCACCGCCCGGGTTGTTTCACGAAGAAATCCAGAG...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366960.8
CDS-3UTR TCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGTCAGCTGCCCATCTTTaGATGCAGCCCTCTGGGATG +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKSAAHL*MQPSGM
Trigger: CATCCCAGAGGGCTGCATTCAAAGATGGGCAGCTGA...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGAAAGAGCAGGAATATTaGCAGAGAACTGTAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLKEQEY*QRTVAG
Trigger: ACCTGCTACAGTTCTCTGCCAATATTCCTGCTCTTT...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGAGCAGCAAGGTGTGCTaGGAAGCTTTTAATAGCTTT +
Preference number: 4 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLSSKVC*EAFNSF
Trigger: AAAGCTATTAAAAGCTTCCCAGCACACCTTGCTGCT...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGGTCTCAGAGTCTCTCTaGAATAAAGAAGTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLVSESL*NKEVGS
Trigger: GGAACCAACTTCTTTATTCCAGAGAGACTCTGAGAC...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTTTATTCCTGCTGGATaGCATTCAACCAGAGTCTTG +
Preference number: 4 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLFIPAG*HSTRVL
Trigger: CAAGACTCTGGTTGAATGCCATCCAGCAGGAATAAA...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGAAGCTACTGCTGTCCTaGGGACTAGAAGTTGGCTGC +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKKLLLS*GLEVGC
Trigger: GCAGCCAACTTCTAGTCCTCAGGACAGCAGTAGCTT...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGAAGAACTTCAGCTCGTaGGCTCTCAGCTGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKKNFSS*ALSCVL
Trigger: CAGCACACAGCTGAGAGCTCACGAGCTGAAGTTCTT...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGATATTCATTAGCACCTaGGAGTGGACTACAAATACG +
Preference number: 4 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLIFIST*EWTTNT
Trigger: CGTATTTGTAGTCCACTCTCAGGTGCTAATGAATAT...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGGAGCTGTTGAATGAGTaGGCGAGCCTCTTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKELLNE*ASLFRD
Trigger: GTCTCTGAAGAGGCTCGCTCACTCATTCAACAGCTC...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGGCAAGAGCTGTTGAATaGGTGAGCGAGCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKARAVE*VSEPLQ
Trigger: CTGAAGAGGCTCGCTCACTCATTCAACAGCTCTTGC...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGCCAACCTGGTGTTGTTaGAGCCTTTCAGCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKPTWCC*SLSAGV
Trigger: AACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGG...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTTCTTGTGTCTCACCTaGATAAGTTCCTGTTATGAG +
Preference number: 4 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLFLCLT*ISSCYE
Trigger: CTCATAACAGGAACTTATGCAGGTGAGACACAAGAA...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGCTGGGATGTAAAACCTaGAGGCTAGTGCTAATTTTT +
Preference number: 4 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLLGCKT*RLVLIF
Trigger: AAAAATTAGCACTAGCCTCCAGGTTTTACATCCCAG...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTTCAGAGACACATTCTaGCATGTTCAAAGTAGTGTG +
Preference number: 4 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLFRDTF*HVQSSV
Trigger: CACACTACTTTGAACATGCCAGAATGTGTCTCTGAA...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
3UTR CAA 72 bp CTTTGTTTCACTAGAGCATTTTCTGTTCCATTTAATTaGATGAGAGGACCTGGTCGATGGCAGATGGAAGCT +
Preference number: 4 (lower is better)
Translates to: LCFTRAFSVPFN*MRGPGRWQMEA
Trigger: AGCTTCCATCTGCCATCGACCAGGTCCTCTCATCAAATTAAATGGAACAGAAAATGCTCTAGTGAAACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGGTTGGCTGCTGCAGGTaGACTTTTGCAAGTGTAGGT +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKVGCCR*TFASVG
Trigger: ACCTACACTTGCAAAAGTTCACCTGCAGCAGCCAAC...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGGTTTGCAGTTACTGCTaGCTCAACCACTCCAAGTCC +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKVCSYC*LNHSKS
Trigger: GGACTTGGAGTGGTTGAGTCAGCAGTAACTGCAAAC...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGCATAAGTTCCTGTTATaGGGCCAGGGGACTAGTGAG +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKHKFLL*GQGTSE
Trigger: CTCACTAGTCCCCTGGCCTCATAACAGGAACTTATG...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGCCAGATCACTGTCACTaGAGAAGCCTTCCGTACTAC +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKPDHCH*RSLPYY
Trigger: GTAGTACGGAAGGCTTCTCCAGTGACAGTGATCTGG...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGCTTCTGGGTCATCGTTaGGGAAGAACTTCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKLLGHR*GRTSAR
Trigger: ACGAGCTGAAGTTCTTCCCCAACGATGACCCAGAAG...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGATGAGGGAATCTGAGTaGGCTTCAGCAGGACCAATT +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKMRESE*ASAGPI
Trigger: AATTGGTCCTGCTGAAGCTCACTCAGATTCCCTCAT...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGGTCGTTCCAGAGGATTaGACTGCAAGAGCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKVVPED*TARAVE
Trigger: TTCAACAGCTCTTGCAGTTCAATCCTCTGGAACGAC...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGCAATTATCCGGGCGGTaGCCTTATATACTGTGTAGC +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKQLSGR*PYILCS
Trigger: GCTACACAGTATATAAGGTCACCGCCCGGATAATTG...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366959.4
CDS-3UTR GCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGGTCAGCAGCAAGGTGTaGTGGGAAGCTTTTAATAGC +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKVSSKV*WEAFNS
Trigger: GCTATTAAAAGCTTCCCAGCACACCTTGCTGCTGAC...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGTTGCAGCCTTTCAGCTaGGGTTTGGATTATAAGGGG +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKLQPFS*GLDYKG
Trigger: CCCCTTATAATCCAAACCCCAGCTGAAAGGCTGCAA...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGCTGCTAATGGTGTCCTaGGCTTTAAACTCTACCTTG +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKLLMVS*ALNSTL
Trigger: CAAGGTAGAGTTTAAAGCTCAGGACACCATTAGCAG...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGGAGATGATGTACTTATaGAGACACACCATGTTGGGC +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKEMMYL*RHTMLG
Trigger: GCCCAACATGGTGTGTCTGCATAAGTACATCATCTC...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGTCCCAGGAGTTCACTTaGGCTATCCTTACTGTCTAT +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKSQEFT*AILTVY
Trigger: ATAGACAGTAAGGATAGCGCAAGTGAACTCCTGGGA...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGGCCTTTCTCCTCATGTaGTTGGCATTGTTCAGTACT +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKAFLLM*LALFST
Trigger: AGTACTGAACAATGCCAAGCACATGAGGAGAAAGGC...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGCACTCAGTTCCTCTATaGCTTTCTCCTCATGTGCTT +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKHSVPL*LSPHVL
Trigger: AAGCACATGAGGAGAAAGGCATAGAGGAACTGAGTG...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGAGAACTAACTGCTTCTaGGTCATCGTTGGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKRTNCF*VIVGEE
Trigger: TTCTTCCCCAACGATGACCCAGAAGCAGTTAGTTCT...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGTCTACTGAGGGAATCTaGTGTTCTTGGAGAACTAAC +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKSTEGI*CSWRTN
Trigger: GTTAGTTCTCCAAGAACATCAGATTCCCTCAGTAGA...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGCTTCATCAGTACCACTaGCATCATCAAAAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKLHQYH*HHQKQH
Trigger: ATGCTGCTTTTGATGATGTCAGTGGTACTGATGAAG...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGGAAAAGGGGAGAAACTaGAGCAATGGAATTGTGTCA +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKEKGRN*SNGIVS
Trigger: TGACACAATTCCATTGCTTCAGTTTCTCCCCTTTTC...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGTGGTCTTTCTGTTCCTaGTGTATTCACTGCTTTTCC +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKWSFCS*CIHCFS
Trigger: GGAAAAGCAGTGAATACAGCAGGAACAGAAAGACCA...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR GCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGCCAGCTCTAAGTACTTaGAGATTTCCTACTAGTCCT +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKPALST*RFPTSP
Trigger: AGGACTAGTAGGAAATCTGCAAGTACTTAGAGCTGG...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGAGCAGCAAGGTGTGCTaGGAAGCTTTTAATAGCTTT +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKSSKVC*EAFNSF
Trigger: AAAGCTATTAAAAGCTTCCCAGCACACCTTGCTGCT...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGCTACAAATAACATCCTaGGATCCTCCTGTGCATAGT +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKLQITS*DPPVHS
Trigger: ACTATGCACAGGAGGATCCCAGGATGTTATTTGTAG...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGAGTACATTCTCTCTATaGCATCGCTGTCACAGGAAT +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKSTFSL*HRCHRN
Trigger: ATTCCTGTGACAGCGATGCCATAGAGAGAATGTACT...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGTCTCCTGAACTACTATaGTCAACAGCTGCTACAAAT +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKSPELL*STAATN
Trigger: ATTTGTAGCAGCTGTTGATCATAGTAGTTCAGGAGA...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGCAAAGACATATCTCCTaGACTACTATGATCAACAGC +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKQRHIS*TTMINS
Trigger: GCTGTTGATCATAGTAGTTCAGGAGATATGTCTTTG...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGATATTCATTAGCACCTaGGAGTGGACTACAAATACG +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKIFIST*EWTTNT
Trigger: CGTATTTGTAGTCCACTCTCAGGTGCTAATGAATAT...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR TCA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGCTAAAATACGTTAGCTaGATGTGTCCTCTATCATTC +
Preference number: 4 (lower is better)
Translates to: MVETDNISQGKEQTHFFKLKYVS*MCPLSF
Trigger: GAATGATAGAGGACACATTCAGCTAACGTATTTTAG...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS TCA 90 bp CATCCTCCCGCCGCCTCTGCCGCCGCCGCCACCCGCCCGGGATCATaGGGGAAACCCGGCGCCGCCGCGGTCCAGGTTCCCCAACGCAGC +
Preference number: 5 (lower is better)
Translates to: HPPAASAAAATRPGS*GKPGAAAVQVPQRS
Trigger: GCTGCGTTGGGGAACCTGGACCGCGGCGGCGCCGGGTTTCCCTCATGATCCCGGGCGGGTGGCGGCGGCGGCAGAGGCGGCGGGAGGATG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS CCA 90 bp GCGGTCCAGGTTCCCCAACGCAGCGGCGAAGCGGCGAGGGGGCGGTaGCTCCAAGGCGGCTCCACGGCGGCGCCTCAGCTGCACAGCTCT +
Preference number: 5 (lower is better)
Translates to: AVQVPQRSGEAARGR*LQGGSTAAPQLHSS
Trigger: AGAGCTGTGCAGCTGAGGCGCCGCCGTGGAGCCGCCTTGGAGCCACCGCCCCCTCGCCGCTTCGCCGCTGCGTTGGGGAACCTGGACCGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000366960.8
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS-3UTR CAA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTCCCAACCTGGTGTTGTaGCAGCCTTTCAGCTGGGGT +
Preference number: 5 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWIPNLVL*QPFSWG
Trigger: ACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGG...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGCCCAACCTGGTGTTGTaGCAGCCTTTCAGCTGGGGT +
Preference number: 5 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWPNLVL*QPFSWG
Trigger: ACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGG...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTCTCCCCAACCTGGTGTaGTTGCAGCCTTTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWILPNLV*LQPFSW
Trigger: CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAG...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS TCA 90 bp GAACTAACTGCTTCTGGGTCATCGTTGGGGAAGAACTTCAGCTCGTaGGCTCTCAGCTGTGTGCTGGGGCTGTCACTGTCAGCAGCAAGG +
Preference number: 5 (lower is better)
Translates to: ELTASGSSLGKNFSS*ALSCVLGLSLSAAR
Trigger: CCTTGCTGCTGACAGTGACAGCCCCAGCACACAGCTGAGAGCTCACGAGCTGAAGTTCTTCCCCAACGATGACCCAGAAGCAGTTAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS-3UTR CAA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATAGCTCCTGGAGTGGGGTaGGGCTCTCACACAGATCTC +
Preference number: 5 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIIAPGVG*GSHTDL
Trigger: GAGATCTGTGTGAGAGCCCAACCCCACTCCAGGAGC...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTGGTTCCAAAGGGGCCTaGAACTTAGTGATCCTGGAG +
Preference number: 5 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWIGSKGA*NLVILE
Trigger: CTCCAGGATCACTAAGTTCAAGGCCCCTTTGGAACC...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATACTCCCCAACCTGGTGTaGTTGCAGCCTTTCAGCTGG +
Preference number: 5 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIILPNLV*LQPFSW
Trigger: CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAG...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS TCA 90 bp ATATATGACCACAGTTTGCCACCTTGTCAATCACCCCAAGGACTCTaGAGGCCTTCAGCTCCTCGGCAGGGCTCCTTAGGTTCCAAAGGG +
Preference number: 5 (lower is better)
Translates to: IYDHSLPPCQSPQGL*RPSAPRQGSLGSKG
Trigger: CCCTTTGGAACCTAAGGAGCCCTGCCGAGGAGCTGAAGGCCTTCAGAGTCCTTGGGGTGATTGACAAGGTGGCAAACTGTGGTCATATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000615329.4
CDS-3UTR CAA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATATATGACCACAGTTaGCCACCTTCCGCATGCTGC +
Preference number: 5 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWIIYDHS*PPSACC
Trigger: GCAGCATGCGGAAGGTGGCAAACTGTGGTCATATAT...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTCAGAATCTGGCCACTTaGGAGAGCTATCTTGGCCAT +
Preference number: 5 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWIQNLAT*ESYLGH
Trigger: ATGGCCAAGATAGCTCTCCAAAGTGGCCAGATTCTG...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATAGCTTCTGGGTCATCGTaGGGGAAGAACTTCAGCTCG +
Preference number: 5 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIIASGSS*GKNFSS
Trigger: CGAGCTGAAGTTCTTCCCCAACGATGACCCAGAAGC...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGCCTTTCAGCTGGGGTTaGGATTATAAGGGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWPFSWG*DYKGAK
Trigger: TTTGGCCCCCTTATAATCCAAACCCCAGCTGAAAGG...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTCAGGGGACTAGTGAGTaGAAATCTAGTTCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWIQGTSE*KSSSRE
Trigger: CTCCCTGGAACTAGATTTCAACTCACTAGTCCCCTG...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS TCA 90 bp CACCTTCCGCATGCTGCAGCACAAGAAATACTGACTCCTCAGAGATaGTGTACTTATGCAGACACACCATGTTGGGCACACAGCGGGGGA +
Preference number: 5 (lower is better)
Translates to: HLPHAAAQEILTPQR*CTYADTPCWAHSGG
Trigger: TCCCCCGCTGTGTGCCCAACATGGTGTGTCTGCATAAGTACATCATCTCTGAGGAGTCAGTATTTCTTGTGCTGCAGCATGCGGAAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
CDS-3UTR CAA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGCTTTGGAGAGCTATCTaGGCCATCATCTTCCTGGTT +
Preference number: 5 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWLWRAI*AIIFLV
Trigger: AACCAGGAAGATGATGGCCAAGATAGCTCTCCAAAG...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTTTGCTGCAGCTTCTCTaGTTGACTCCAATTCACCAG +
Preference number: 5 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWILLQLL*LTPIHQ
Trigger: CTGGTGAATTGGAGTCAACAAGAGAAGCTGCAGCAA...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGCTCATGTGCTTGGCATaGTTCAGTACTAAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWLMCLA*FSTKPE
Trigger: CTCAGGCTTAGTACTGAACAATGCCAAGCACATGAG...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS TCA 90 bp TTGTGTCCATTACAAGTAAAACCTTGTCAATCACCCCAAGGACTCTaGAGGCCTTCAGCTCCTCGGCAGGGCTCCTTAGGTTCCAAAGGG +
Preference number: 5 (lower is better)
Translates to: LCPLQVKPCQSPQGL*RPSAPRQGSLGSKG
Trigger: CCCTTTGGAACCTAAGGAGCCCTGCCGAGGAGCTGAAGGCCTTCAGAGTCCTTGGGGTGATTGACAAGGTTTTACTTGTAATGGACACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
CDS-3UTR CAA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATAGTCCCAGGAGTTCACTaGCGCTATCCTTACTGTCTA +
Preference number: 5 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIIVPGVH*RYPYCL
Trigger: TAGACAGTAAGGATAGCGCAAGTGAACTCCTGGGAC...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTCATTCAACCAGAGTCTaGCCAGTGAGAAGTTCAAAG +
Preference number: 5 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWIHSTRV*PVRSSK
Trigger: CTTTGAACTTCTCACTGGCAAGACTCTGGTTGAATG...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGCGTTCTTCTTCTGTTTaGCTCTGTTCACTGTCAGAA +
Preference number: 5 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWRSSSV*LCSLSE
Trigger: TTCTGACAGTGAACAGAGCAAAACAGAAGAAGAACG...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCATATATGACCACAGTTaGCCACCTTCCGCATGCTGC +
Preference number: 5 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLIYDHS*PPSACC
Trigger: GCAGCATGCGGAAGGTGGCAAACTGTGGTCATATAT...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp GTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATTCTTCTTCTGAACTaGAACCAGAATCTGGCCACT +
Preference number: 5 (lower is better)
Translates to: VTCSPTWCCCSLSAGVWIILLLN*NQNLAT
Trigger: AGTGGCCAGATTCTGGTTCAAGTTCAGAAGAAGAAT...AATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATACTGCAGCTTCTCTTGTaGACTCCAATTCACCAGGTA +
Preference number: 5 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIILQLLL*TPIHQV
Trigger: TACCTGGTGAATTGGAGTCAACAAGAGAAGCTGCAG...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATACTCATGTGCTTGGCATaGTTCAGTACTAAGCCTGAG +
Preference number: 5 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIILMCLA*FSTKPE
Trigger: CTCAGGCTTAGTACTGAACAATGCCAAGCACATGAG...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCCCTTTCAGCTGGGGTTaGGATTATAAGGGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLPFSWG*DYKGAK
Trigger: TTTGGCCCCCTTATAATCCAAACCCCAGCTGAAAGG...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCCAGGGGACTAGTGAGTaGAAATCTAGTTCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLQGTSE*KSSSRE
Trigger: CTCCCTGGAACTAGATTTCAACTCACTAGTCCCCTG...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS GCA 90 bp TGCTGCAGCACAAGAAATACTGACTCCTCAGAGATGATGTACTTATaGAGACACACCATGTTGGGCACACAGCGGGGGATGATGGTCTTT +
Preference number: 5 (lower is better)
Translates to: CCSTRNTDSSEMMYL*RHTMLGTQRGMMVF
Trigger: AAAGACCATCATCCCCCGCTGTGTGCCCAACATGGTGTGTCTGCATAAGTACATCATCTCTGAGGAGTCAGTATTTCTTGTGCTGCAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
CDS CCA 90 bp CCAGAGGGATCACTCAGTTCCTCTATGCCTTTCTCCTCATGTGCTTaGCATTGTTCAGTACTAAGCCTGAGGCATAAAACATCAGGGGCT +
Preference number: 5 (lower is better)
Translates to: PEGSLSSSMPFSSCA*HCSVLSLRHKTSGA
Trigger: AGCCCCTGATGTTTTATGCCTCAGGCTTAGTACTGAACAATGCCAAGCACATGAGGAGAAAGGCATAGAGGAACTGAGTGATCCCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS-3UTR CAA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGTCTAATGGGAGAATTTaGATTGGAAGCCATTCCATC +
Preference number: 5 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWSNGRI*IGSHSI
Trigger: GATGGAATGGCTTCCAATCAAAATTCTCCCATTAGA...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGTCATTCAATAAGATGTaGTTTGGGTTCAAATCGCGG +
Preference number: 5 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWSFNKM*FGFKSR
Trigger: CCGCGATTTGAACCCAAACAACATCTTATTGAATGA...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp TATGATCCTGGTGACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGCATGGCAACCATCTGTaGACATTAATGTCCTTTGAA +
Preference number: 5 (lower is better)
Translates to: YDPGDLLPNLVLLQPFSWHGNHL*TLMSFE
Trigger: TTCAAAGGACATTAATGTCAACAGATGGTTGCCATG...CCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGTCACCAGGATCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS GCA 90 bp AACTGCCAGGAAAGAGGCTACGACTTTCCCGTTCTTCTTCTGTTTTaGTCTGTTCACTGTCAGAAGCAACAGCCCCTAGTGCTGAAGAAT +
Preference number: 5 (lower is better)
Translates to: NCQERGYDFPVLLLF*SVHCQKQQPLVLKN
Trigger: ATTCTTCAGCACTAGGGGCTGTTGCTTCTGACAGTGAACAGAGCAAAACAGAAGAAGAACGGGAAAGTCGTAGCCTCTTTCCTGGCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000468069.1
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS-3UTR CAA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCCAGGTCTTCAGCACATaGTCTTCTCTCTTCGATAAC +
Preference number: 5 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLQVFST*SSLFDN
Trigger: GTTATCGAAGAGAGAAGACAATGTGCTGAAGACCTG...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATACGTTCTTCTTCTGTTTaGCTCTGTTCACTGTCAGAA +
Preference number: 5 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIIRSSSV*LCSLSE
Trigger: TTCTGACAGTGAACAGAGCAAAACAGAAGAAGAACG...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATATTTCTCCTCATGTGCTaGGCATTGTTCAGTACTAAG +
Preference number: 5 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIIFLLMC*ALFSTK
Trigger: CTTAGTACTGAACAATGCCAAGCACATGAGGAGAAA...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS TCA 90 bp GAGCGAGCCTCTTCAGAGACACATTCTGGCATGTTCAAAGTAGTGTaGGTATTTATTCCTGCTGGATGGCATTCAACCAGAGTCTTGCCA +
Preference number: 5 (lower is better)
Translates to: ERASSETHSGMFKVV*VFIPAGWHSTRVLP
Trigger: TGGCAAGACTCTGGTTGAATGCCATCCAGCAGGAATAAATACTCACACTACTTTGAACATGCCAGAATGTGTCTCTGAAGAGGCTCGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000491616.1
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS GCA 90 bp TACATCATCAAGCTGAGGTTTCCCATAAAGACTAGAGATACTTTCTaGCCGCATGAGGTACTCGGCTGTTCTTCTCTTCACAGCTTCTCG +
Preference number: 5 (lower is better)
Translates to: YIIKLRFPIKTRDTF*PHEVLGCSSLHSFS
Trigger: CGAGAAGCTGTGAAGAGAAGAACAGCCGAGTACCTCATGCGGGCAGAAAGTATCTCTAGTCTTTATGGGAAACCTCAGCTTGATGATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000468069.1
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS CCA 90 bp TGGGATCCTCCTGTGCATAGTGTTTCTCTGTTATACTATAGGATTTaGGCCCAGAGGGATCACTCAGTTCCTCTATGCCTTTCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: WDPPVHSVSLLYYRI*AQRDHSVPLCLSPH
Trigger: ATGAGGAGAAAGGCATAGAGGAACTGAGTGATCCCTCTGGGCCCAAATCCTATAGTATAACAGAGAAACACTATGCACAGGAGGATCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS-3UTR CAA 90 bp ACCTGCTCCCCAACCTGGTGTTGTTGCAGCCTTTCAGCTGGGGTTTGGATTATATTTCTTCTGTGTTGTTaGCAGTTACTGCTGACTCAA +
Preference number: 5 (lower is better)
Translates to: TCSPTWCCCSLSAGVWIIFLLCC*QLLLTQ
Trigger: TTGAGTCAGCAGTAACTGCAAACAACACAGAAGAAA...TATAATCCAAACCCCAGCTGAAAGGCTGCAACAACACCAGGTTGGGGAGCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCTCAATAAGATGTTGTTaGGGTTCAAATCGCGGCACA +
Preference number: 5 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLSIRCC*GSNRGT
Trigger: TGTGCCGCGATTTGAACCCAAACAACATCTTATTGA...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS TCA 90 bp TGTCACTGGAGAAGCCTTCCGTACTACACTCAGGAAAGGTATCAATaGGGGAATCTGAGTGAGCTTCAGCAGGACCAATTAATTCAGAAC +
Preference number: 5 (lower is better)
Translates to: CHWRSLPYYTQERYQ*GNLSELQQDQLIQN
Trigger: GTTCTGAATTAATTGGTCCTGCTGAAGCTCACTCAGATTCCCTCATTGATACCTTTCCTGAGTGTAGTACGGAAGGCTTCTCCAGTGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000543354.5
ENST00000543470.5
ENST00000615329.4
CDS GCA 90 bp CTGCTTTCTCCAAATAATCTCTCTTGCCAAGCTTCGGCTTTAAACTaGCAGGAAAGAGGCTACGACTTTCCCGTTCTTCTTCTGTTTTGC +
Preference number: 5 (lower is better)
Translates to: LLSPNNLSCQASALN*QERGYDFPVLLLFC
Trigger: GCAAAACAGAAGAAGAACGGGAAAGTCGTAGCCTCTTTCCTGGCAGTTTAAAGCCGAAGCTTGGCAAGAGAGATTATTTGGAGAAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000468069.1
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS-3UTR CAA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCATTACAAGTAAAACCTaGTCAATCACCCCAAGGACT +
Preference number: 5 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLITSKT*SITPRT
Trigger: AGTCCTTGGGGTGATTGACAAGGTTTTACTTGTAAT...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGTGCAGACACACCATGTaGGGCACACAGCGGGGGATG +
Preference number: 5 (lower is better)
Translates to: MVETDNISQGKEQTHFFKCRHTM*GTQRGM
Trigger: CATCCCCCGCTGTGTGCCCAACATGGTGTGTCTGCA...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGCTGCAGCTTCTCTTGTaGACTCCAATTCACCAGGTA +
Preference number: 5 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLLQLLL*TPIHQV
Trigger: TACCTGGTGAATTGGAGTCAACAAGAGAAGCTGCAG...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTTGCTGCAGCTTCTCTaGTTGACTCCAATTCACCAG +
Preference number: 5 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLLLQLL*LTPIHQ
Trigger: CTGGTGAATTGGAGTCAACAAGAGAAGCTGCAGCAA...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp CCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTAATGGCCAGCTCCATGGCAACCATCTGTaGACATTAATGTCCTTTGAA +
Preference number: 5 (lower is better)
Translates to: PTFMSQGTSGRKFCNGQLHGNHL*TLMSFE
Trigger: TTCAAAGGACATTAATGTCAACAGATGGTTGCCATG...GAGCTGGCCATTACAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS TCA 90 bp TTTGGAGAGCTATCTTGGCCATCATCTTCCTGGTTGCTGTCATCTTaGGAACTTGGAGTAAGACTACTCTTCAAAGGCAGAGCTTTAAGC +
Preference number: 5 (lower is better)
Translates to: FGELSWPSSSWLLSS*ELGVRLLFKGRALS
Trigger: GCTTAAAGCTCTGCCTTTGAAGAGTAGTCTTACTCCAAGTTCTCAAGATGACAGCAACCAGGAAGATGATGGCCAAGATAGCTCTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS TCA 90 bp ATGTCAGCATGCAGTCGATTTATGACTGAACTCTTGAAGAGACACTaGAGAATTACCTTGTCAATCACCCCAAGGACTCTGAAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: MSACSRFMTELLKRH*RITLSITPRTLKAF
Trigger: GAAGGCCTTCAGAGTCCTTGGGGTGATTGACAAGGTAATTCTTCAGTGTCTCTTCAAGAGTTCAGTCATAAATCGACTGCATGCTGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468069.1
CDS-3UTR CAA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGCTGGTTGCTGTCATCTaGAGAACTTGGAGTAAGACT +
Preference number: 5 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLLVAVI*RTWSKT
Trigger: AGTCTTACTCCAAGTTCTCAAGATGACAGCAACCAG...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS CCA 90 bp GACACATTCTGGCATGTTCAAAGTAGTGTGAGTATTTATTCCTGCTaGATGGCATTCAACCAGAGTCTTGCCAGTGAGAAGTTCAAAGAG +
Preference number: 5 (lower is better)
Translates to: DTFWHVQSSVSIYSC*MAFNQSLASEKFKE
Trigger: CTCTTTGAACTTCTCACTGGCAAGACTCTGGTTGAATGCCATCCAGCAGGAATAAATACTCACACTACTTTGAACATGCCAGAATGTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000491616.1
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS-3UTR CAA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGATTCTTCTTCTGAACTaGAACCAGAATCTGGCCACT +
Preference number: 5 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLILLLN*NQNLAT
Trigger: AGTGGCCAGATTCTGGTTCAAGTTCAGAAGAAGAAT...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTTTCTCCTCATGTGCTaGGCATTGTTCAGTACTAAG +
Preference number: 5 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLFLLMC*ALFSTK
Trigger: CTTAGTACTGAACAATGCCAAGCACATGAGGAGAAA...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp TTAGTTGTGAAGTCCTACTTTCATGTCACAGGGCACTTCTGGAAGGAAGTTCTGTCTGTTCCATTTAATTaGATGAGAGGACCTGGTCGA +
Preference number: 5 (lower is better)
Translates to: LVVKSYFHVTGHFWKEVLSVPFN*MRGPGR
Trigger: TCGACCAGGTCCTCTCATCAAATTAAATGGAACAGA...CAGAACTTCCTTCCAGAAGTGCCCTGTGACATGAAAGTAGGACTTCACAACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS TCA 90 bp GAAATAACTGGCACTGAGTCATCTGAGCCCCTGCTAATGGTGTCCTaGGCTTTAAACTCTACCTTGCTTTCACTAGTATTAAAACTCCTA +
Preference number: 5 (lower is better)
Translates to: EITGTESSEPLLMVS*ALNSTLLSLVLKLL
Trigger: TAGGAGTTTTAATACTAGTGAAAGCAAGGTAGAGTTTAAAGCTCAGGACACCATTAGCAGGGGCTCAGATGACTCAGTGCCAGTTATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS TCA 90 bp CCAAAGCTTCAAAGACAGAATGTCAGCATGCAGTCGATTTATGACTaGACTCTTGAAGAGACACTGAAGAATTACCTTGTCAATCACCCC +
Preference number: 5 (lower is better)
Translates to: PKLQRQNVSMQSIYD*TLEETLKNYLVNHP
Trigger: GGGGTGATTGACAAGGTAATTCTTCAGTGTCTCTTCAAGAGTTCAGTCATAAATCGACTGCATGCTGACATTCTGTCTTTGAAGCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468069.1
CDS GCA 90 bp AGAGACACATTCTGGCATGTTCAAAGTAGTGTGAGTATTTATTCCTaGTGGATGGCATTCAACCAGAGTCTTGCCAGTGAGAAGTTCAAA +
Preference number: 5 (lower is better)
Translates to: RDTFWHVQSSVSIYS*WMAFNQSLASEKFK
Trigger: TTTGAACTTCTCACTGGCAAGACTCTGGTTGAATGCCATCCAGCAGGAATAAATACTCACACTACTTTGAACATGCCAGAATGTGTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000491616.1
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS TCA 90 bp AGACCATTAAAATACCTTCCGTACTACACTCAGGAAAGGTATCAATaGGGGAATCTGAGTGAGCTTCAGCAGGACCAATTAATTCAGAAC +
Preference number: 5 (lower is better)
Translates to: RPLKYLPYYTQERYQ*GNLSELQQDQLIQN
Trigger: GTTCTGAATTAATTGGTCCTGCTGAAGCTCACTCAGATTCCCTCATTGATACCTTTCCTGAGTGTAGTACGGAAGGTATTTTAATGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000614059.4
CDS-3UTR CAA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGCAGAATCTGGCCACTTaGGAGAGCTATCTTGGCCAT +
Preference number: 5 (lower is better)
Translates to: MVETDNISQGKEQTHFFKQNLAT*ESYLGH
Trigger: ATGGCCAAGATAGCTCTCCAAAGTGGCCAGATTCTG...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGGTCCCAGGAGTTCACTaGCGCTATCCTTACTGTCTA +
Preference number: 5 (lower is better)
Translates to: MVETDNISQGKEQTHFFKVPGVH*RYPYCL
Trigger: TAGACAGTAAGGATAGCGCAAGTGAACTCCTGGGAC...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGCTTTGGAGAGCTATCTaGGCCATCATCTTCCTGGTT +
Preference number: 5 (lower is better)
Translates to: MVETDNISQGKEQTHFFKLWRAI*AIIFLV
Trigger: AACCAGGAAGATGATGGCCAAGATAGCTCTCCAAAG...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS TCA 90 bp CCTTCCGTACTACACTCAGGAAAGGTATCAATGAGGGAATCTGAGTaGGCTTCAGCAGGACCAATTAATTCAGAACTATCATTAATTATT +
Preference number: 5 (lower is better)
Translates to: PSVLHSGKVSMRESE*ASAGPINSELSLII
Trigger: AATAATTAATGATAGTTCTGAATTAATTGGTCCTGCTGAAGCTCACTCAGATTCCCTCATTGATACCTTTCCTGAGTGTAGTACGGAAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS TCA 90 bp GAATCCGAAGAAAGATTGAGACCAAAAGTTCTAATGGGAGAATTTTaGTTGGAAGCCATTCCATCATCTAACTCAGCAAGAGAATCCACA +
Preference number: 5 (lower is better)
Translates to: ESEERLRPKVLMGEF*LEAIPSSNSAREST
Trigger: TGTGGATTCTCTTGCTGAGTTAGATGATGGAATGGCTTCCAATCAAAATTCTCCCATTAGAACTTTTGGTCTCAATCTTTCTTCGGATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000468069.1
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS CCA 90 bp TATCTCCTGAACTACTATGATCAACAGCTGCTACAAATAACATCCTaGGATCCTCCTGTGCATAGTGTTTCTCTGTTATACTATAGGATT +
Preference number: 5 (lower is better)
Translates to: YLLNYYDQQLLQITS*DPPVHSVSLLYYRI
Trigger: AATCCTATAGTATAACAGAGAAACACTATGCACAGGAGGATCCCAGGATGTTATTTGTAGCAGCTGTTGATCATAGTAGTTCAGGAGATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS-3UTR CAA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGCATTCAACCAGAGTCTaGCCAGTGAGAAGTTCAAAG +
Preference number: 5 (lower is better)
Translates to: MVETDNISQGKEQTHFFKHSTRV*PVRSSK
Trigger: CTTTGAACTTCTCACTGGCAAGACTCTGGTTGAATG...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGACTGAAGCAATGGAATaGTGTCAACAGACTGACATG +
Preference number: 5 (lower is better)
Translates to: MVETDNISQGKEQTHFFKTEAME*CQQTDM
Trigger: CATGTCAGTCTGTTGACACAATTCCATTGCTTCAGT...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS-3UTR CAA 90 bp ATGGTAGAAACTGATAATATTTCACAAGGAAAGGAACAGACGCATTTCTTCAAGTTTCTTCTGTGTTGTTaGCAGTTACTGCTGACTCAA +
Preference number: 5 (lower is better)
Translates to: MVETDNISQGKEQTHFFKFLLCC*QLLLTQ
Trigger: TTGAGTCAGCAGTAACTGCAAACAACACAGAAGAAA...CTTGAAGAAATGCGTCTGTTCCTTTCCTTGTGAAATATTATCAGTTTCTACCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366959.4
ENST00000366960.8
CDS CCA 72 bp GTTCCCCAACGCAGCGGCGAAGCGGCGAGGGGGCGGTaGCTCCAAGGCGGCTCCACGGCGGCGCCTCAGCTG +
Preference number: 6 (lower is better)
Translates to: VPQRSGEAARGR*LQGGSTAAPQL
Trigger: CAGCTGAGGCGCCGCCGTGGAGCCGCCTTGGAGCCACCGCCCCCTCGCCGCTTCGCCGCTGCGTTGGGGAAC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS TCA 72 bp ATACTGTGTAGCCCCTCGGGTGTCGCTGGGGCTCGGTaGCAGTGTAGAAACGGGCCAGGTCGGCACTCCGCT +
Preference number: 6 (lower is better)
Translates to: ILCSPSGVAGAR*QCRNGPGRHSA
Trigger: AGCGGAGTGCCGACCTGGCCCGTTTCTACACTGTCACCGAGCCCCAGCGACACCCGAGGGGCTACACAGTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS TCA 72 bp GCTTCTGGGTCATCGTTGGGGAAGAACTTCAGCTCGTaGGCTCTCAGCTGTGTGCTGGGGCTGTCACTGTCA +
Preference number: 6 (lower is better)
Translates to: ASGSSLGKNFSS*ALSCVLGLSLS
Trigger: TGACAGTGACAGCCCCAGCACACAGCTGAGAGCTCACGAGCTGAAGTTCTTCCCCAACGATGACCCAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS TCA 72 bp ACTGAAGAATTACCTTGTCAATCACCCCAAGGACTCTaGAGGCCTTCAGCTCCTCGGCAGGGCTCCTTAGGT +
Preference number: 6 (lower is better)
Translates to: TEELPCQSPQGL*RPSAPRQGSLG
Trigger: ACCTAAGGAGCCCTGCCGAGGAGCTGAAGGCCTTCAGAGTCCTTGGGGTGATTGACAAGGTAATTCTTCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468069.1
CDS TCA 72 bp TTACAAGTAAAACCTTGTCAATCACCCCAAGGACTCTaGAGGCCTTCAGCTCCTCGGCAGGGCTCCTTAGGT +
Preference number: 6 (lower is better)
Translates to: LQVKPCQSPQGL*RPSAPRQGSLG
Trigger: ACCTAAGGAGCCCTGCCGAGGAGCTGAAGGCCTTCAGAGTCCTTGGGGTGATTGACAAGGTTTTACTTGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
CDS TCA 72 bp TATGCAGACACACCATGTTGGGCACACAGCGGGGGATaGTGGTCTTTCTGTTCCTGCTGTATTCACTGCTTT +
Preference number: 6 (lower is better)
Translates to: YADTPCWAHSGG*WSFCSCCIHCF
Trigger: AAAGCAGTGAATACAGCAGGAACAGAAAGACCATCATCCCCCGCTGTGTGCCCAACATGGTGTGTCTGCATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
CDS GCA 72 bp AGGATTTGGGCCCAGAGGGATCACTCAGTTCCTCTATaGCTTTCTCCTCATGTGCTTGGCATTGTTCAGTAC +
Preference number: 6 (lower is better)
Translates to: RIWAQRDHSVPL*LSPHVLGIVQY
Trigger: GTACTGAACAATGCCAAGCACATGAGGAGAAAGGCATAGAGGAACTGAGTGATCCCTCTGGGCCCAAATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS CAA 72 bp TCCTCAGAGATGATGTACTTATGCAGACACACCATGTaGGGCACACAGCGGGGGATGATGGTCTTTCTGTTC +
Preference number: 6 (lower is better)
Translates to: SSEMMYLCRHTM*GTQRGMMVFLF
Trigger: GAACAGAAAGACCATCATCCCCCGCTGTGTGCCCAACATGGTGTGTCTGCATAAGTACATCATCTCTGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
CDS CAA 72 bp GGAAAGAGGCTACGACTTTCCCGTTCTTCTTCTGTTTaGCTCTGTTCACTGTCAGAAGCAACAGCCCCTAGT +
Preference number: 6 (lower is better)
Translates to: GKRLRLSRSSSV*LCSLSEATAPS
Trigger: ACTAGGGGCTGTTGCTTCTGACAGTGAACAGAGCAAAACAGAAGAAGAACGGGAAAGTCGTAGCCTCTTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000468069.1
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS CAA 90 bp AAACTGCCAGGAAAGAGGCTACGACTTTCCCGTTCTTCTTCTGTTTaGCTCTGTTCACTGTCAGAAGCAACAGCCCCTAGTGCTGAAGAA +
Preference number: 6 (lower is better)
Translates to: KLPGKRLRLSRSSSV*LCSLSEATAPSAEE
Trigger: TTCTTCAGCACTAGGGGCTGTTGCTTCTGACAGTGAACAGAGCAAAACAGAAGAAGAACGGGAAAGTCGTAGCCTCTTTCCTGGCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000468069.1
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS CAA 90 bp AATACTGACTCCTCAGAGATGATGTACTTATGCAGACACACCATGTaGGGCACACAGCGGGGGATGATGGTCTTTCTGTTCCTGCTGTAT +
Preference number: 6 (lower is better)
Translates to: NTDSSEMMYLCRHTM*GTQRGMMVFLFLLY
Trigger: ATACAGCAGGAACAGAAAGACCATCATCCCCCGCTGTGTGCCCAACATGGTGTGTCTGCATAAGTACATCATCTCTGAGGAGTCAGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
CDS TCA 72 bp CATGCTGCAGCACAAGAAATACTGACTCCTCAGAGATaGTGTACTTATGCAGACACACCATGTTGGGCACAC +
Preference number: 6 (lower is better)
Translates to: HAAAQEILTPQR*CTYADTPCWAH
Trigger: GTGTGCCCAACATGGTGTGTCTGCATAAGTACATCATCTCTGAGGAGTCAGTATTTCTTGTGCTGCAGCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
CDS GCA 72 bp AAGCTGAGGTTTCCCATAAAGACTAGAGATACTTTCTaGCCGCATGAGGTACTCGGCTGTTCTTCTCTTCAC +
Preference number: 6 (lower is better)
Translates to: KLRFPIKTRDTF*PHEVLGCSSLH
Trigger: GTGAAGAGAAGAACAGCCGAGTACCTCATGCGGGCAGAAAGTATCTCTAGTCTTTATGGGAAACCTCAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000468069.1
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS CCA 72 bp GGATTCAAAGCTACTGCTGTCCTGAGGACTAGAAGTTaGCTGCTGCAGGTGAACTTTTGCAAGTGTAGGTTT +
Preference number: 6 (lower is better)
Translates to: GFKATAVLRTRS*LLQVNFCKCRF
Trigger: AAACCTACACTTGCAAAAGTTCACCTGCAGCAGCCAACTTCTAGTCCTCAGGACAGCAGTAGCTTTGAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS TCA 72 bp GGCACTGAGTCATCTGAGCCCCTGCTAATGGTGTCCTaGGCTTTAAACTCTACCTTGCTTTCACTAGTATTA +
Preference number: 6 (lower is better)
Translates to: GTESSEPLLMVS*ALNSTLLSLVL
Trigger: TAATACTAGTGAAAGCAAGGTAGAGTTTAAAGCTCAGGACACCATTAGCAGGGGCTCAGATGACTCAGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS GCA 72 bp CCAAATAATCTCTCTTGCCAAGCTTCGGCTTTAAACTaGCAGGAAAGAGGCTACGACTTTCCCGTTCTTCTT +
Preference number: 6 (lower is better)
Translates to: PNNLSCQASALN*QERGYDFPVLL
Trigger: AAGAAGAACGGGAAAGTCGTAGCCTCTTTCCTGGCAGTTTAAAGCCGAAGCTTGGCAAGAGAGATTATTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000468069.1
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS CCA 72 bp CCTGTGCATAGTGTTTCTCTGTTATACTATAGGATTTaGGCCCAGAGGGATCACTCAGTTCCTCTATGCCTT +
Preference number: 6 (lower is better)
Translates to: PVHSVSLLYYRI*AQRDHSVPLCL
Trigger: AAGGCATAGAGGAACTGAGTGATCCCTCTGGGCCCAAATCCTATAGTATAACAGAGAAACACTATGCACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS CCA 72 bp CTAAGAAAATGGCAGAGAGTATGTTCATGGATAGGTTaGTTCAGGATTCTCCCTCCTGGACATCCTCTGGAT +
Preference number: 6 (lower is better)
Translates to: LRKWQRVCSWIG*FRILPPGHPLD
Trigger: ATCCAGAGGATGTCCAGGAGGGAGAATCCTGAACCAACCTATCCATGAACATACTCTCTGCCATTTTCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543470.5
CDS CAA 72 bp ATTCTTCTTCTGAACTTGAACCAGAATCTGGCCACTTaGGAGAGCTATCTTGGCCATCATCTTCCTGGTTGC +
Preference number: 6 (lower is better)
Translates to: ILLLNLNQNLAT*ESYLGHHLPGC
Trigger: GCAACCAGGAAGATGATGGCCAAGATAGCTCTCCAAAGTGGCCAGATTCTGGTTCAAGTTCAGAAGAAGAAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS CAA 90 bp CTTTGGAGAGCTATCTTGGCCATCATCTTCCTGGTTGCTGTCATCTaGAGAACTTGGAGTAAGACTACTCTTCAAAGGCAGAGCTTTAAG +
Preference number: 6 (lower is better)
Translates to: LWRAILAIIFLVAVI*RTWSKTTLQRQSFK
Trigger: CTTAAAGCTCTGCCTTTGAAGAGTAGTCTTACTCCAAGTTCTCAAGATGACAGCAACCAGGAAGATGATGGCCAAGATAGCTCTCCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS GCA 72 bp TTCTGGCATGTTCAAAGTAGTGTGAGTATTTATTCCTaGTGGATGGCATTCAACCAGAGTCTTGCCAGTGAG +
Preference number: 6 (lower is better)
Translates to: FWHVQSSVSIYS*WMAFNQSLASE
Trigger: CTCACTGGCAAGACTCTGGTTGAATGCCATCCAGCAGGAATAAATACTCACACTACTTTGAACATGCCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000491616.1
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS CCA 72 bp TCACTCAGTTCCTCTATGCCTTTCTCCTCATGTGCTTaGCATTGTTCAGTACTAAGCCTGAGGCATAAAACA +
Preference number: 6 (lower is better)
Translates to: SLSSSMPFSSCA*HCSVLSLRHKT
Trigger: TGTTTTATGCCTCAGGCTTAGTACTGAACAATGCCAAGCACATGAGGAGAAAGGCATAGAGGAACTGAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS CCA 72 bp TGGCATGTTCAAAGTAGTGTGAGTATTTATTCCTGCTaGATGGCATTCAACCAGAGTCTTGCCAGTGAGAAG +
Preference number: 6 (lower is better)
Translates to: WHVQSSVSIYSC*MAFNQSLASEK
Trigger: CTTCTCACTGGCAAGACTCTGGTTGAATGCCATCCAGCAGGAATAAATACTCACACTACTTTGAACATGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000491616.1
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS TCA 72 bp GAGCTGGGTAACAAAGACATATCTCCTGAACTACTATaGTCAACAGCTGCTACAAATAACATCCTGGGATCC +
Preference number: 6 (lower is better)
Translates to: ELGNKDISPELL*STAATNNILGS
Trigger: GGATCCCAGGATGTTATTTGTAGCAGCTGTTGATCATAGTAGTTCAGGAGATATGTCTTTGTTACCCAGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS TCA 72 bp TTTGCAGTTACTGCTGACTCAACCACTCCAAGTCCTTaGAACTTAGGATCTGAGCTGGGTAACAAAGACATA +
Preference number: 6 (lower is better)
Translates to: FAVTADSTTPSP*NLGSELGNKDI
Trigger: TATGTCTTTGTTACCCAGCTCAGATCCTAAGTTTCAAGGACTTGGAGTGGTTGAGTCAGCAGTAACTGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS TCA 72 bp TGCAGTCGATTTATGACTGAACTCTTGAAGAGACACTaGAGAATTACCTTGTCAATCACCCCAAGGACTCTG +
Preference number: 6 (lower is better)
Translates to: CSRFMTELLKRH*RITLSITPRTL
Trigger: CAGAGTCCTTGGGGTGATTGACAAGGTAATTCTTCAGTGTCTCTTCAAGAGTTCAGTCATAAATCGACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468069.1
CDS TCA 72 bp CTACACTCAGGAAAGGTATCAATGAGGGAATCTGAGTaGGCTTCAGCAGGACCAATTAATTCAGAACTATCA +
Preference number: 6 (lower is better)
Translates to: LHSGKVSMRESE*ASAGPINSELS
Trigger: TGATAGTTCTGAATTAATTGGTCCTGCTGAAGCTCACTCAGATTCCCTCATTGATACCTTTCCTGAGTGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS TCA 72 bp ATGGCATCATTAAGTACTAGAAGCTATTACTGGGGGTaGATTTGCTGCACTGATAATGAAGCTCTAGACAGG +
Preference number: 6 (lower is better)
Translates to: MASLSTRSYYWG*ICCTDNEALDR
Trigger: CCTGTCTAGAGCTTCATTATCAGTGCAGCAAATTCACCCCCAGTAATAGCTTCTAGTACTTAATGATGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000491616.1
CDS CCA 72 bp CTTCAAGCTGTTTACTATTGTAAAGAGCAGGAATATTaGCAGAGAACTGTAGCAGGTCTTCAGCACATTGTC +
Preference number: 6 (lower is better)
Translates to: LQAVYYCKEQEY*QRTVAGLQHIV
Trigger: GACAATGTGCTGAAGACCTGCTACAGTTCTCTGCCAATATTCCTGCTCTTTACAATAGTAAACAGCTTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS CAA 72 bp GACTACAAATACGGAATAAGCTTTCTTCTGTGTTGTTaGCAGTTACTGCTGACTCAACCACTCCAAGTCCTT +
Preference number: 6 (lower is better)
Translates to: DYKYGISFLLCC*QLLLTQPLQVL
Trigger: AAGGACTTGGAGTGGTTGAGTCAGCAGTAACTGCAAACAACACAGAAGAAAGCTTATTCCGTATTTGTAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS CAA 72 bp GCTGAATGTGTCCTCTATCATTCAATAAGATGTTGTTaGGGTTCAAATCGCGGCACACAATTCCCTCTCTAT +
Preference number: 6 (lower is better)
Translates to: AECVLYHSIRCC*GSNRGTQFPLY
Trigger: ATAGAGAGGGAATTGTGTGCCGCGATTTGAACCCAAACAACATCTTATTGAATGATAGAGGACACATTCAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4
CDS CAA 90 bp GCATTTGCAAAAGTTCCTGACCTCTATCATTCAATAAGATGTTGTTaGGGTTCAAATCGCGGCACACAATTCCCTCTCTATGTAAAGCAT +
Preference number: 6 (lower is better)
Translates to: AFAKVPDLYHSIRCC*GSNRGTQFPLYVKH
Trigger: ATGCTTTACATAGAGAGGGAATTGTGTGCCGCGATTTGAACCCAAACAACATCTTATTGAATGATAGAGGTCAGGAACTTTTGCAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491616.1
CDS TCA 72 bp CAAAGACAGAATGTCAGCATGCAGTCGATTTATGACTaGACTCTTGAAGAGACACTGAAGAATTACCTTGTC +
Preference number: 6 (lower is better)
Translates to: QRQNVSMQSIYD*TLEETLKNYLV
Trigger: GACAAGGTAATTCTTCAGTGTCTCTTCAAGAGTTCAGTCATAAATCGACTGCATGCTGACATTCTGTCTTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468069.1
CDS GCA 72 bp CTTAAGATCCAAAGCTTCAAAGACAGAATGTCAGCATaGAGTCGATTTATGACTGAACTCTTGAAGAGACAC +
Preference number: 6 (lower is better)
Translates to: LKIQSFKDRMSA*SRFMTELLKRH
Trigger: GTGTCTCTTCAAGAGTTCAGTCATAAATCGACTGCATGCTGACATTCTGTCTTTGAAGCTTTGGATCTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468069.1
CDS CAA 72 bp AAAGTTCCTGACCTCTATCATTCAATAAGATGTTGTTaGGGTTCAAATCGCGGCACACAATTCCCTCTCTAT +
Preference number: 6 (lower is better)
Translates to: KVPDLYHSIRCC*GSNRGTQFPLY
Trigger: ATAGAGAGGGAATTGTGTGCCGCGATTTGAACCCAAACAACATCTTATTGAATGATAGAGGTCAGGAACTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491616.1
CDS CAA 90 bp AATACGTTAGCTGAATGTGTCCTCTATCATTCAATAAGATGTTGTTaGGGTTCAAATCGCGGCACACAATTCCCTCTCTATGTAAAGCAT +
Preference number: 6 (lower is better)
Translates to: NTLAECVLYHSIRCC*GSNRGTQFPLYVKH
Trigger: ATGCTTTACATAGAGAGGGAATTGTGTGCCGCGATTTGAACCCAAACAACATCTTATTGAATGATAGAGGACACATTCAGCTAACGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000366959.4
ENST00000366960.8
ENST00000490299.5
ENST00000543354.5
ENST00000543470.5
ENST00000614059.4
ENST00000615329.4