Pregenerated sensors for RPS21 (Homo sapiens)
Ensembl gene IDs: ENSG00000171858Ensembl transcript IDs: ENST00000370562.1, ENST00000370592.2, ENST00000450116.6
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATGGCAGAAGGTCAGCTGTGCCACCAGCCCACGTCTCTCCCCCGCTaGGCGAATGGAGACAGGCGCAGAAGGGGAGCCACCTCTCCCGGG | + |
|
Preference number: 1 (lower is better) Translates to: MAEGQLCHQPTSLPR*ANGDRRRRGATSPG Trigger: CCCGGGAGAGGTGGCTCCCCTTCTGCGCCTGTCTCCATTCGCTCAGCGGGGGAGAGACGTGGGCTGGTGGCACAGCTGACCTTCTGCCAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| 3UTR GCA 90 bp | AGAAGCGGCAGGCGGCCAGCCCAGTCCAGCTGGCTCAAACTACTCTaGCAGCAGATCTACTCAGGCACCATCACACACTCCAATGCGCAC | + |
|
Preference number: 1 (lower is better) Translates to: RSGRRPAQSSWLKLL*QQIYSGTITHSNAH Trigger: GTGCGCATTGGAGTGTGTGATGGTGCCTGAGTAGATCTGCTGGCAGAGTAGTTTGAGCCAGCTGGACTGGGCTGGCCGCCTGCCGCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| 3UTR CCA 72 bp | GTGCCACCAGCCCACGTCTCTCCCCCGCTGAGCGAATaGAGACAGGCGCAGAAGGGGAGCCACCTCTCCCGG | + |
|
Preference number: 3 (lower is better) Translates to: VPPAHVSPPLSE*RQAQKGSHLSR Trigger: CCGGGAGAGGTGGCTCCCCTTCTGCGCCTGTCTCCATTCGCTCAGCGGGGGAGAGACGTGGGCTGGTGGCAC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| 3UTR TCA 72 bp | GGTCAGCTGTGCCACCAGCCCACGTCTCTCCCCCGCTaGGCGAATGGAGACAGGCGCAGAAGGGGAGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: GQLCHQPTSLPR*ANGDRRRRGAT Trigger: GGTGGCTCCCCTTCTGCGCCTGTCTCCATTCGCTCAGCGGGGGAGAGACGTGGGCTGGTGGCACAGCTGACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| 3UTR CCA 72 bp | CCCTCAAGAAGCGGCAGGCGGCCAGCCCAGTCCAGCTaGCTCAAACTACTCTGCCAGCAGATCTACTCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: PSRSGRRPAQSS*LKLLCQQIYSG Trigger: GCCTGAGTAGATCTGCTGGCAGAGTAGTTTGAGCCAGCTGGACTGGGCTGGCCGCCTGCCGCTTCTTGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| 3UTR GCA 72 bp | AGGCGGCCAGCCCAGTCCAGCTGGCTCAAACTACTCTaGCAGCAGATCTACTCAGGCACCATCACACACTCC | + |
|
Preference number: 3 (lower is better) Translates to: RRPAQSSWLKLL*QQIYSGTITHS Trigger: GGAGTGTGTGATGGTGCCTGAGTAGATCTGCTGGCAGAGTAGTTTGAGCCAGCTGGACTGGGCTGGCCGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| 3UTR CCA 72 bp | AAAGAGAAGAAGGGTCACAAACCACTCCCCCAGGTTTaGGAAACACCAATCCTCAAAGCCAGCCTCTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: KEKKGHKPLPQV*ETPILKASLCL Trigger: CAGGCAGAGGCTGGCTTTGAGGATTGGTGTTTCCCAAACCTGGGGGAGTGGTTTGTGACCCTTCTTCTCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| 3UTR CCA 72 bp | AACCAGGGGAAAAGGACAACGTTAAGACCACGCCTCTaGAGCAGTCCTAGTCCACTCACTCTGCCCAAATGT | + |
|
Preference number: 3 (lower is better) Translates to: NQGKRTTLRPRL*SSPSPLTLPKC Trigger: ACATTTGGGCAGAGTGAGTGGACTAGGACTGCTCCAGAGGCGTGGTCTTAACGTTGTCCTTTTCCCCTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370562.1 ENST00000450116.6 |
||
| 3UTR-3UTR CAA 90 bp | CAGATCTACTCAGGCACCATCACACACTCCAATGCGCACGGTAAAGTCCACGATACCACTCCCCCAGGTTaGGGAAACACCAATCCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: QIYSGTITHSNAHGKVHDTTPPG*GNTNPQ Trigger: TTGAGGATTGGTGTTTCCCAAACCTGGGGGAGTGGT...ATCGTGGACTTTACCGTGCGCATTGGAGTGTGTGATGGTGCCTGAGTAGATCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| CDS-3UTR TCA 90 bp | AAGAAGCGGCAGGCGGCCAGCCCAGTCCAGCTGGCTCAAACTACTCTGCCAGCAGGGCAGCCTGCAGCCTaGCTATGGTGGAGCGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KKRQAASPVQLAQTTLPAGQPAA*LWWSGV Trigger: GACCCCGCTCCACCATAGTCAGGCTGCAGGCTGCCC...TGCTGGCAGAGTAGTTTGAGCCAGCTGGACTGGGCTGGCCGCCTGCCGCTTCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| CDS-3UTR CCA 90 bp | CTCCGGCTGCCTGAGATGGCAGAAGGTCAGCTGTGCCACCAGCCCACGTCTCTCCCCCCGCTGAGCGAATaGAGACAGGCGCAGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LRLPEMAEGQLCHQPTSLPPLSE*RQAQKG Trigger: CCCCTTCTGCGCCTGTCTCCATTCGCTCAGCGGGGG...GAGAGACGTGGGCTGGTGGCACAGCTGACCTTCTGCCATCTCAGGCAGCCGGAG 66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| CDS-3UTR TCA 90 bp | CCTCAAGAAGCGGCAGGCGGCCAGCCCAGTCCAGCTGGCTCAAACTACTCTGCCGCAGAGTCTGCTGCCTaGGTGTCTTCTCAGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: PQEAAGGQPSPAGSNYSAAESAA*VSSQST Trigger: GGTGCTCTGAGAAGACACTCAGGCAGCAGACTCTGC...GGCAGAGTAGTTTGAGCCAGCTGGACTGGGCTGGCCGCCTGCCGCTTCTTGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370562.1 ENST00000370592.2 |
||
| CDS-3UTR TCA 90 bp | CTCAAGAAGCGGCAGGCGGCCAGCCCAGTCCAGCTGGCTCAAACTACTCTGCCATCCACTCCGGCTGCCTaGGATGGCAGAAGGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LKKRQAASPVQLAQTTLPSTPAA*DGRRSA Trigger: AGCTGACCTTCTGCCATCTCAGGCAGCCGGAGTGGA...TGGCAGAGTAGTTTGAGCCAGCTGGACTGGGCTGGCCGCCTGCCGCTTCTTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| CDS-3UTR CCA 90 bp | TTTCCACTCCGGCTGCCTGAGATGGCAGAAGGTCAGCTGTGCCACCAGCCCACGTCTGCATTTCGAGGCTaGGCTGCGCCTGGGGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: FPLRLPEMAEGQLCHQPTSAFRG*AAPGES Trigger: TGACTCCCCAGGCGCAGCCCAGCCTCGAAATGCAGA...CGTGGGCTGGTGGCACAGCTGACCTTCTGCCATCTCAGGCAGCCGGAGTGGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| CDS-3UTR CCA 90 bp | CCCTCAAGAAGCGGCAGGCGGCCAGCCCAGTCCAGCTGGCTCAAACTACTCTGCCCAGCCCAGTCCAGCTaGCTCAAACTACTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PSRSGRRPAQSSWLKLLCPAQSS*LKLLCQ Trigger: CTGGCAGAGTAGTTTGAGCCAGCTGGACTGGGCTGG...GCAGAGTAGTTTGAGCCAGCTGGACTGGGCTGGCCGCCTGCCGCTTCTTGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370562.1 ENST00000370592.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGGTCAGCTGTGCCACCAGCCCACGTCTCTCCCCCGCTGAGCGAATGGAGATCCGGCTGCCTGAGATaGCAGAAGGTCAGCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RRSAVPPAHVSPPLSEWRSGCLR*QKVSCA Trigger: GGCACAGCTGACCTTCTGCCATCTCAGGCAGCCGGA...TCTCCATTCGCTCAGCGGGGGAGAGACGTGGGCTGGTGGCACAGCTGACCTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| CDS-3UTR TCA 90 bp | TCCACCCTCAAGAAGCGGCAGGCGGCCAGCCCAGTCCAGCTGGCTCAAACTACTGCAGAGTCTGCTGCCTaGGTGTCTTCTCAGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: STLKKRQAASPVQLAQTTAESAA*VSSQST Trigger: GGTGCTCTGAGAAGACACTCAGGCAGCAGACTCTGC...AGTAGTTTGAGCCAGCTGGACTGGGCTGGCCGCCTGCCGCTTCTTGAGGGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370562.1 ENST00000370592.2 |
||
| CDS-3UTR GCA 90 bp | TCCACCCTCAAGAAGCGGCAGGCGGCCAGCCCAGTCCAGCTGGCTCAAACTACTCTCAAAGCCAGCCTCTaGCTGTACCTTCACCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: STLKKRQAASPVQLAQTTLKASL*LYLHPR Trigger: CCTGGGGTGAAGGTACAGGCAGAGGCTGGCTTTGAG...AGTAGTTTGAGCCAGCTGGACTGGGCTGGCCGCCTGCCGCTTCTTGAGGGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| CDS-3UTR GCA 90 bp | CACCCCTCTTCCACCCTCAAGAAGCGGCAGGCGGCCAGCCCAGTCCAGCTGGCTTGGCTCAAACTACTCTaGCAGCAGATCTACTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HPSSTLKKRQAASPVQLAWLKLL*QQIYSG Trigger: GCCTGAGTAGATCTGCTGGCAGAGTAGTTTGAGCCA...AGCCAGCTGGACTGGGCTGGCCGCCTGCCGCTTCTTGAGGGTGGAAGAGGGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000370562.1 ENST00000370592.2 |
||
| CDS-3UTR TCA 90 bp | TTCCACCCTCAAGAAGCGGCAGGCGGCCAGCCCAGTCCAGCTGGCTCAAACTACCCCCCAACCTTACTTTaGGACGATGCCATCGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FHPQEAAGGQPSPAGSNYPPTLL*DDAIGL Trigger: AAGGCCGATGGCATCGTCTCAAAGTAAGGTTGGGGG...GTAGTTTGAGCCAGCTGGACTGGGCTGGCCGCCTGCCGCTTCTTGAGGGTGGAA 60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| CDS-3UTR TCA 90 bp | CCACCCTCAAGAAGCGGCAGGCGGCCAGCCCAGTCCAGCTGGCTCAAACTACTCCACTCTGCCCAAATGTaGGCCCCCAACCTTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PPSRSGRRPAQSSWLKLLHSAQM*APNLTL Trigger: CAAAGTAAGGTTGGGGGCTCACATTTGGGCAGAGTG...GAGTAGTTTGAGCCAGCTGGACTGGGCTGGCCGCCTGCCGCTTCTTGAGGGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| CDS-3UTR GCA 90 bp | AGAAGGTCAGCTGTGCCACCAGCCCACGTCTCTCCCCCGCTGAGCGAATGGAGATATTTCCACTCCGGCTaGCTGAGATGGCAGAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RRSAVPPAHVSPPLSEWRYFHSG*LRWQKV Trigger: GACCTTCTGCCATCTCAGGCAGCCGGAGTGGAAATA...TCTCCATTCGCTCAGCGGGGGAGAGACGTGGGCTGGTGGCACAGCTGACCTTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| CDS-3UTR CCA 90 bp | TCCACCCTCAAGAAGCGGCAGGCGGCCAGCCCAGTCCAGCTGGCTCAAACTACTTTAAGACCACGCCTCTaGAGCAGTCCTAGTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: STLKKRQAASPVQLAQTTLRPRL*SSPSPL Trigger: GAGTGGACTAGGACTGCTCCAGAGGCGTGGTCTTAA...AGTAGTTTGAGCCAGCTGGACTGGGCTGGCCGCCTGCCGCTTCTTGAGGGTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| CDS-3UTR TCA 90 bp | CAGATCTACTCAGGCACCATCACACACTCCAATGCGCACGGTAAAGTCCACGATACGTCTCTCCCCCGCTaGGCGAATGGAGACAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QIYSGTITHSNAHGKVHDTSLPR*ANGDRR Trigger: GCGCCTGTCTCCATTCGCTCAGCGGGGGAGAGACGT...ATCGTGGACTTTACCGTGCGCATTGGAGTGTGTGATGGTGCCTGAGTAGATCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| CDS-3UTR GCA 90 bp | TCCACCCTCAAGAAGCGGCAGGCGGCCAGCCCAGTCCAGCTGGCTCAAACTACTTGGCTCAAACTACTCTaGCAGCAGATCTACTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: STLKKRQAASPVQLAQTTWLKLL*QQIYSG Trigger: GCCTGAGTAGATCTGCTGGCAGAGTAGTTTGAGCCA...AGTAGTTTGAGCCAGCTGGACTGGGCTGGCCGCCTGCCGCTTCTTGAGGGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370562.1 ENST00000370592.2 |
||
| CDS-3UTR GCA 90 bp | GAGAAGAAGGGTCACAAACCACTCCCCCAGGTTTGGGAAACACCAATCCTCAAAATTTCGAGGCTGGGCTaGGCCTGGGGAGTCACCGCG | + |
|
Preference number: 4 (lower is better) Translates to: EKKGHKPLPQVWETPILKISRLG*AWGVTA Trigger: CGCGGTGACTCCCCAGGCGCAGCCCAGCCTCGAAAT...TTTGAGGATTGGTGTTTCCCAAACCTGGGGGAGTGGTTTGTGACCCTTCTTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| CDS-3UTR GCA 90 bp | AAGTTCCTAGAACCAGGGGAAAAGGACAACGTTAAGACCACGCCTCTGGAGCAGGCAGAAGGTCAGCTGTaGCACCAGCCCACGTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KFLEPGEKDNVKTTPLEQAEGQL*HQPTSL Trigger: GAGAGACGTGGGCTGGTGGCACAGCTGACCTTCTGC...CTGCTCCAGAGGCGTGGTCTTAACGTTGTCCTTTTCCCCTGGTTCTAGGAACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| CDS-3UTR CCA 90 bp | TTCCTAGAACCAGGGGAAAAGGACAACGTTAAGACCACGCCTCTGGAGCAGTCCCCAGCCCAGTCCAGCTaGCTCAAACTACTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLEPGEKDNVKTTPLEQSPAQSS*LKLLCQ Trigger: CTGGCAGAGTAGTTTGAGCCAGCTGGACTGGGCTGG...GGACTGCTCCAGAGGCGTGGTCTTAACGTTGTCCTTTTCCCCTGGTTCTAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| CDS-3UTR TCA 90 bp | AAAAGGACAACGTTAAGACCACGCCTCTGGAGCAGTCCTAGTCCACTCACTCTGCCCCCAACCTTACTTTaGGACGATGCCATCGGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KRTTLRPRLWSSPSPLTLPPTLL*DDAIGL Trigger: AAGGCCGATGGCATCGTCTCAAAGTAAGGTTGGGGG...CAGAGTGAGTGGACTAGGACTGCTCCAGAGGCGTGGTCTTAACGTTGTCCTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370562.1 ENST00000450116.6 |
||
| CDS-3UTR CCA 90 bp | CAGGGGAAAAGGACAACGTTAAGACCACGCCTCTGGAGCAGTCCTAGTCCACTCCCACTCCCCCAGGTTTaGGAAACACCAATCCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QGKRTTLRPRLWSSPSPLPLPQV*ETPILK Trigger: TTTGAGGATTGGTGTTTCCCAAACCTGGGGGAGTGG...GAGTGGACTAGGACTGCTCCAGAGGCGTGGTCTTAACGTTGTCCTTTTCCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| CDS-3UTR CCA 90 bp | TTCCTAGAACCAGGGGAAAAGGACAACGTTAAGACCACGCCTCTGGAGCAGTCCTTAAGACCACGCCTCTaGAGCAGTCCTAGTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: FLEPGEKDNVKTTPLEQSLRPRL*SSPSPL Trigger: GAGTGGACTAGGACTGCTCCAGAGGCGTGGTCTTAA...GGACTGCTCCAGAGGCGTGGTCTTAACGTTGTCCTTTTCCCCTGGTTCTAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000370562.1 ENST00000450116.6 |
||
| CDS-3UTR TCA 90 bp | AAAAGGACAACGTTAAGACCACGCCTCTGGAGCAGTCCTAGTCCACTCACTCTGCACTCTGCCCAAATGTaGGCCCCCAACCTTACTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KRTTLRPRLWSSPSPLTLHSAQM*APNLTL Trigger: CAAAGTAAGGTTGGGGGCTCACATTTGGGCAGAGTG...CAGAGTGAGTGGACTAGGACTGCTCCAGAGGCGTGGTCTTAACGTTGTCCTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370562.1 ENST00000450116.6 |
||
| CDS-3UTR GCA 90 bp | AAGTTCCTAGAACCAGGGGAAAAGGACAACGTTAAGACCACGCCTCTGGAGCAGCACAATGGGACAGCCTaGCTTTCCCGCACATATATC | + |
|
Preference number: 4 (lower is better) Translates to: KFLEPGEKDNVKTTPLEQHNGTA*LSRTYI Trigger: GATATATGTGCGGGAAAGGCAGGCTGTCCCATTGTG...CTGCTCCAGAGGCGTGGTCTTAACGTTGTCCTTTTCCCCTGGTTCTAGGAACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| CDS GCA 90 bp | CTGCCTGTACCTTCACCCCAGGGGCTCCTCCACAATGGGACAGCCTaGCTTTCCCGCACATATATCACAACCTTCCCGCCTCCCGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LPVPSPQGLLHNGTA*LSRTYITTFPPPGL Trigger: GAGCCCGGGAGGCGGGAAGGTTGTGATATATGTGCGGGAAAGGCAGGCTGTCCCATTGTGGAGGAGCCCCTGGGGTGAAGGTACAGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| CDS CCA 90 bp | AAGCCAGCCTCTGCCTGTACCTTCACCCCAGGGGCTCCTCCACAATaGGACAGCCTGCCTTTCCCGCACATATATCACAACCTTCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: KPASACTFTPGAPPQ*DSLPFPHIYHNLPA Trigger: GGCGGGAAGGTTGTGATATATGTGCGGGAAAGGCAGGCTGTCCCATTGTGGAGGAGCCCCTGGGGTGAAGGTACAGGCAGAGGCTGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| CDS-3UTR CAA 90 bp | CCACGCCTCTGGAGCAGTCCTAGTCCACTCACTCTGCCCAAATGTGAGCCCCCAACCACTCCCCCAGGTTaGGGAAACACCAATCCTCAA | + |
|
Preference number: 5 (lower is better) Translates to: PRLWSSPSPLTLPKCEPPTTPPG*GNTNPQ Trigger: TTGAGGATTGGTGTTTCCCAAACCTGGGGGAGTGGT...TGGGGGCTCACATTTGGGCAGAGTGAGTGGACTAGGACTGCTCCAGAGGCGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| CDS-3UTR CAA 90 bp | AGGCAGAGTCTGCTGCCTGAGTGTCTTCTCAGAGCACCCCTCTTCCACCCTCAAGCCCCCAACCTTACTTaGAGACGATGCCATCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RQSLLPECLLRAPLFHPQAPNLT*RRCHRP Trigger: AGGCCGATGGCATCGTCTCAAAGTAAGGTTGGGGGC...TTGAGGGTGGAAGAGGGGTGCTCTGAGAAGACACTCAGGCAGCAGACTCTGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| CDS-3UTR CAA 90 bp | AAAAGGACAACGTTAAGACCACGCCTCTGGAGCAGTCCTAGTCCACTCACTCTGGCCCCCAACCTTACTTaGAGACGATGCCATCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KRTTLRPRLWSSPSPLTLAPNLT*RRCHRP Trigger: AGGCCGATGGCATCGTCTCAAAGTAAGGTTGGGGGC...CAGAGTGAGTGGACTAGGACTGCTCCAGAGGCGTGGTCTTAACGTTGTCCTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000370562.1 ENST00000450116.6 |
||
| CDS GCA 72 bp | CCTTCACCCCAGGGGCTCCTCCACAATGGGACAGCCTaGCTTTCCCGCACATATATCACAACCTTCCCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PSPQGLLHNGTA*LSRTYITTFPP Trigger: AGGCGGGAAGGTTGTGATATATGTGCGGGAAAGGCAGGCTGTCCCATTGTGGAGGAGCCCCTGGGGTGAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||
| CDS CAA 90 bp | GTCAACCTAGAAAGAGAAGAAGGGTCACAAACCACTCCCCCAGGTTaGGGAAACACCAATCCTCAAAGCCAGCCTCTGCCTGTACCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: VNLEREEGSQTTPPG*GNTNPQSQPLPVPS Trigger: TGAAGGTACAGGCAGAGGCTGGCTTTGAGGATTGGTGTTTCCCAAACCTGGGGGAGTGGTTTGTGACCCTTCTTCTCTTTCTAGGTTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370562.1 |
||