Pregenerated sensors for RPS12 (Homo sapiens)
Ensembl gene IDs: ENSG00000112306Ensembl transcript IDs: ENST00000484616.2
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS TCA 90 bp | TTTCCGGTAGGACGGATGCCATTCAGAACTTTTGCGCTAACACCATaGACTCCATGCCTTCTTCCCTTGGGTGGCAGTTTTGTTCCGGTT | + |
Preference number: 5 (lower is better) Translates to: FPVGRMPFRTFALTP*TPCLLPLGGSFVPV Trigger: AACCGGAACAAAACTGCCACCCAAGGGAAGAAGGCATGGAGTTCATGGTGTTAGCGCAAAAGTTCTGAATGGCATCCGTCCTACCGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484616.2 |
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CDS TCA 72 bp | GGACGGATGCCATTCAGAACTTTTGCGCTAACACCATaGACTCCATGCCTTCTTCCCTTGGGTGGCAGTTTT | + |
Preference number: 6 (lower is better) Translates to: GRMPFRTFALTP*TPCLLPLGGSF Trigger: AAAACTGCCACCCAAGGGAAGAAGGCATGGAGTTCATGGTGTTAGCGCAAAAGTTCTGAATGGCATCCGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484616.2 |
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CDS CCA 72 bp | GCTAACACCATGAACTCCATGCCTTCTTCCCTTGGGTaGCAGTTTTGTTCCGGTTGCAAGAACCCACAGTAT | + |
Preference number: 6 (lower is better) Translates to: ANTMNSMPSSLG*QFCSGCKNPQY Trigger: ATACTGTGGGTTCTTGCAACCGGAACAAAACTGCCACCCAAGGGAAGAAGGCATGGAGTTCATGGTGTTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484616.2 |
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CDS CAA 72 bp | CATGAACTCCATGCCTTCTTCCCTTGGGTGGCAGTTTaGTTCCGGTTGCAAGAACCCACAGTATTGAGACTG | + |
Preference number: 6 (lower is better) Translates to: HELHAFFPWVAV*FRLQEPTVLRL Trigger: CAGTCTCAATACTGTGGGTTCTTGCAACCGGAACAAAACTGCCACCCAAGGGAAGAAGGCATGGAGTTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484616.2 |