Pregenerated sensors for RPP40 (Homo sapiens)
Ensembl gene IDs: ENSG00000124787Ensembl transcript IDs: ENST00000319533.9, ENST00000380051.7, ENST00000464646.1, ENST00000468105.5, ENST00000479782.1, ENST00000483546.1, ENST00000618533.4
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAATGGAGTGAGATGGGGACCAATATCCCCGGTCCCTGGACATCCTaGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTT | + |
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Preference number: 1 (lower is better) Translates to: QWSEMGTNIPGPWTS*PSVPHSNPQPCAYV Trigger: AACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGATGTCCAGGGACCGGGGATATTGGTCCCCATCTCACTCCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| 3UTR CCA 90 bp | TATCTCAACCAATGGAGTGAGATGGGGACCAATATCCCCGGTCCCTaGACATCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGT | + |
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Preference number: 1 (lower is better) Translates to: YLNQWSEMGTNIPGP*TSWPSVPHSNPQPC Trigger: ACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGATGTCCAGGGACCGGGGATATTGGTCCCCATCTCACTCCATTGGTTGAGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| 3UTR-3UTR GCA 90 bp | GGAGTGAGATGGGGACCAATATCCCCGGTCCCTGGACATCCTGGCCCAGTGTACCTGGACAGCAGGCCTTaGTGCCATCACAGATGGGTC | + |
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Preference number: 2 (lower is better) Translates to: GVRWGPISPVPGHPGPVYLDSRP*CHHRWV Trigger: GACCCATCTGTGATGGCAGCAAGGCCTGCTGTCCAG...GTACACTGGGCCAGGATGTCCAGGGACCGGGGATATTGGTCCCCATCTCACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| 3UTR-3UTR CCA 90 bp | GGAGTGAGATGGGGACCAATATCCCCGGTCCCTGGACATCCTGGCCCAGTGTACTGCTGCCATCACAGATaGGTCTCAGGTGCAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: GVRWGPISPVPGHPGPVYCCHHR*VSGAGQ Trigger: CTGCCCTGCACCTGAGACCCATCTGTGATGGCAGCA...GTACACTGGGCCAGGATGTCCAGGGACCGGGGATATTGGTCCCCATCTCACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| 3UTR-3UTR GCA 90 bp | AGTGAGATGGGGACCAATATCCCCGGTCCCTGGACATCCTGGCCCAGTGTACCACAGATGGGTCTCAGGTaGAGGGCAGGATGCCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: SEMGTNIPGPWTSWPSVPQMGLR*RAGCQQ Trigger: TTGCTGGCATCCTGCCCTGCACCTGAGACCCATCTG...TGGTACACTGGGCCAGGATGTCCAGGGACCGGGGATATTGGTCCCCATCTCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| 3UTR-3UTR GCA 90 bp | GGAGTGAGATGGGGACCAATATCCCCGGTCCCTGGACATCCTGGCCCAGTGTACGACAGCAGGCCTTGCTaGCATCACAGATGGGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: GVRWGPISPVPGHPGPVYDSRPC*HHRWVS Trigger: TGAGACCCATCTGTGATGGCAGCAAGGCCTGCTGTC...GTACACTGGGCCAGGATGTCCAGGGACCGGGGATATTGGTCCCCATCTCACTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| 3UTR-3UTR TCA 90 bp | TCAACCAATGGAGTGAGATGGGGACCAATATCCCCGGTCCCTGGACATCCTGGCCAGCAAATGCTGATCTaGGAAATGTCACCATCACAC | + |
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Preference number: 2 (lower is better) Translates to: STNGVRWGPISPVPGHPGQQMLI*EMSPSH Trigger: GTGTGATGGTGACATTTCTCAGATCAGCATTTGCTG...GCCAGGATGTCCAGGGACCGGGGATATTGGTCCCCATCTCACTCCATTGGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| 3UTR-3UTR TCA 90 bp | CCCTGGACATCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGATGCCAGCAAATGCTaGTCTGAGAAATGTCACCAT | + |
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Preference number: 2 (lower is better) Translates to: PWTSWPSVPHSNPQPCAYDASKC*SEKCHH Trigger: ATGGTGACATTTCTCAGATCAGCATTTGCTGGCATC...ATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGATGTCCAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTTGACAGATCACACAAGCCTGAGTaGACACACAGACCTTTTACC | + |
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Preference number: 2 (lower is better) Translates to: SWPSVPHSNPQPCAYVDRSHKPE*THRPFT Trigger: GGTAAAAGGTCTGTGTGTCCACTCAGGCTTGTGTGA...TCTGTCAACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| 3UTR CCA 72 bp | GAGATGGGGACCAATATCCCCGGTCCCTGGACATCCTaGCCCAGTGTACCACATAGTAACCCACAACCCTGT | + |
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Preference number: 3 (lower is better) Translates to: EMGTNIPGPWTS*PSVPHSNPQPC Trigger: ACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGATGTCCAGGGACCGGGGATATTGGTCCCCATCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| 3UTR-3UTR CAA 90 bp | CCCTGGACATCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATACTGGACAGCAGGCCTaGCTGCCATCACAGATGGGT | + |
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Preference number: 3 (lower is better) Translates to: PWTSWPSVPHSNPQPCAYTGQQA*LPSQMG Trigger: ACCCATCTGTGATGGCAGCAAGGCCTGCTGTCCAGT...ATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGATGTCCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| 3UTR CCA 72 bp | CAATGGAGTGAGATGGGGACCAATATCCCCGGTCCCTaGACATCCTGGCCCAGTGTACCACATAGTAACCCA | + |
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Preference number: 3 (lower is better) Translates to: QWSEMGTNIPGP*TSWPSVPHSNP Trigger: TGGGTTACTATGTGGTACACTGGGCCAGGATGTCCAGGGACCGGGGATATTGGTCCCCATCTCACTCCATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| 3UTR-3UTR CAA 90 bp | TCAACCAATGGAGTGAGATGGGGACCAATATCCCCGGTCCCTGGACATCCTGGCAACCCTGTGCTTATGTaGACAGAGAGAAATCAACTA | + |
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Preference number: 3 (lower is better) Translates to: STNGVRWGPISPVPGHPGNPVLM*TERNQL Trigger: TAGTTGATTTCTCTCTGTCAACATAAGCACAGGGTT...GCCAGGATGTCCAGGGACCGGGGATATTGGTCCCCATCTCACTCCATTGGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR CCA 90 bp | AGTGAGATGGGGACCAATATCCCCGGTCCCTGGACATCCTGGCCCAGTGTACCACCGGCAGGACACCTCTaGCGTTCCCTCCAGCTCGCT | + |
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Preference number: 4 (lower is better) Translates to: SEMGTNIPGPWTSWPSVPPAGHL*RSLQLA Trigger: AGCGAGCTGGAGGGAACGCCAGAGGTGTCCTGCCGG...TGGTACACTGGGCCAGGATGTCCAGGGACCGGGGATATTGGTCCCCATCTCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR GCA 90 bp | GGAGTGAGATGGGGACCAATATCCCCGGTCCCTGGACATCCTGGCCCAGTGTACCAGATGGGTCTCAGGTaGAGGGCAGGATGCCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: GVRWGPISPVPGHPGPVYQMGLR*RAGCQQ Trigger: TTGCTGGCATCCTGCCCTGCACCTGAGACCCATCTG...GTACACTGGGCCAGGATGTCCAGGGACCGGGGATATTGGTCCCCATCTCACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR GCA 90 bp | CCCTGGACATCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATTCGCAAACCAGTAAGTaGCGCGGCGCCTCCCGAAGC | + |
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Preference number: 4 (lower is better) Translates to: PWTSWPSVPHSNPQPCAYSQTSK*RGASRS Trigger: GCTTCGGGAGGCGCCGCGGCACTTACTGGTTTGCGA...ATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGATGTCCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR GCA 90 bp | GGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTTGACAGAGAGAGGCGCAGCGTGGCCATaGTCTCCTGGGTTCCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GPVYHIVTHNPVLMLTERGAAWP*SPGFLV Trigger: GACCAGGAACCCAGGAGAGCATGGCCACGCTGCGCC...TCTCTCTGTCAACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR GCA 90 bp | CCCTGGACATCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATTTCCCTCCAGCTCGCTaGTCTGCAGCACTGGGCACT | + |
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Preference number: 4 (lower is better) Translates to: PWTSWPSVPHSNPQPCAYFPPAR*SAALGT Trigger: AGTGCCCAGTGCTGCAGAGCAGCGAGCTGGAGGGAA...ATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGATGTCCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR CCA 90 bp | CATCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTTGACAGAAGCCGGCGCAGCGTaGCCATGCTCTCCTGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: HPGPVYHIVTHNPVLMLTEAGAA*PCSPGF Trigger: GAACCCAGGAGAGCATGGCCACGCTGCGCCGGCTTC...TGTCAACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR CCA 90 bp | CCCTGGACATCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATTGCTGCCATCACAGATaGGTCTCAGGTGCAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PWTSWPSVPHSNPQPCAYCCHHR*VSGAGQ Trigger: CTGCCCTGCACCTGAGACCCATCTGTGATGGCAGCA...ATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGATGTCCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR GCA 90 bp | TCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTTGACAGATGCGTCTGCACAAGATaGCGGTGGCGCGACTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: SWPSVPHSNPQPCAYVDRCVCTR*RWRDLW Trigger: CCACAAGTCGCGCCACCGGCATCTTGTGCAGACGCA...TCTGTCAACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR CCA 90 bp | ATATATCTCAACCAATGGAGTGAGATGGGGACCAATATCCCCGGTCCCTGGACATGCACAAGATGCCGGTaGCGCGACTTGTGGTTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: IYLNQWSEMGTNIPGPWTCTRCR*RDLWLP Trigger: CGGCAACCACAAGTCGCGCCACCGGCATCTTGTGCA...TGTCCAGGGACCGGGGATATTGGTCCCCATCTCACTCCATTGGTTGAGATATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR CCA 90 bp | CCCTGGACATCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATAATATCCCCGGTCCCTaGACATCCTGGCCCAGTGTA | + |
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Preference number: 4 (lower is better) Translates to: PWTSWPSVPHSNPQPCAYNIPGP*TSWPSV Trigger: TACACTGGGCCAGGATGTCCAGGGACCGGGGATATT...ATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGATGTCCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR TCA 90 bp | AGTGAGATGGGGACCAATATCCCCGGTCCCTGGACATCCTGGCCCAGTGTACCAAGGGTCCAGTGTTCATaGCCAGGTTTTTCAGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: SEMGTNIPGPWTSWPSVPRVQCS*PGFSVL Trigger: AAGAACTGAAAAACCTGGTCATGAACACTGGACCCT...TGGTACACTGGGCCAGGATGTCCAGGGACCGGGGATATTGGTCCCCATCTCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR GCA 90 bp | AGTGAGATGGGGACCAATATCCCCGGTCCCTGGACATCCTGGCCCAGTGTACCAACACAAATAAGCTTTTaGCACCACTGTGCTTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SEMGTNIPGPWTSWPSVPTQISF*HHCAWL Trigger: GAGCCAAGCACAGTGGTGGCAAAAGCTTATTTGTGT...TGGTACACTGGGCCAGGATGTCCAGGGACCGGGGATATTGGTCCCCATCTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR GCA 90 bp | CATCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTTGACACTGGACAGCAGGCCTTaGTGCCATCACAGATGGGTC | + |
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Preference number: 4 (lower is better) Translates to: HPGPVYHIVTHNPVLMLTLDSRP*CHHRWV Trigger: GACCCATCTGTGATGGCAGCAAGGCCTGCTGTCCAG...TGTCAACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR TCA 90 bp | AGTGAGATGGGGACCAATATCCCCGGTCCCTGGACATCCTGGCCCAGTGTACCACATTGTCGATTCTTCTaGACCTGTTTTATGCCAAGC | + |
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Preference number: 4 (lower is better) Translates to: SEMGTNIPGPWTSWPSVPHCRFF*TCFMPS Trigger: GCTTGGCATAAAACAGGTTCAGAAGAATCGACAATG...TGGTACACTGGGCCAGGATGTCCAGGGACCGGGGATATTGGTCCCCATCTCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR TCA 90 bp | GGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTTGACAGAGAGATTAGGTCGACATTACTaGAGACGGCGCCGAGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: GPVYHIVTHNPVLMLTERLGRHY*RRRRAS Trigger: ACTGGCTCGGCGCCGTCTTCAGTAATGTCGACCTAA...TCTCTCTGTCAACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR TCA 90 bp | CCCTGGACATCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATTCTCAACCAATGGAGTaGGATGGGGACCAATATCCC | + |
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Preference number: 4 (lower is better) Translates to: PWTSWPSVPHSNPQPCAYSQPME*DGDQYP Trigger: GGGATATTGGTCCCCATCTCACTCCATTGGTTGAGA...ATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGATGTCCAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR GCA 90 bp | TCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTTGACAGAGGCGCGACTTGTGGTTaGCGAAGTTGGATTTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: SWPSVPHSNPQPCAYVDRGATCG*RSWISR Trigger: GCGAGAAATCCAACTTCGGCAACCACAAGTCGCGCC...TCTGTCAACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR GCA 90 bp | CATCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTTGACAGACAGCAGGCCTTGCTaGCATCACAGATGGGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: HPGPVYHIVTHNPVLMLTDSRPC*HHRWVS Trigger: TGAGACCCATCTGTGATGGCAGCAAGGCCTGCTGTC...TGTCAACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR CCA 90 bp | CATCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTTGACACGGTGGCGCGACTTGTaGTTGCCGAAGTTGGATTTC | + |
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Preference number: 4 (lower is better) Translates to: HPGPVYHIVTHNPVLMLTRWRDL*LPKLDF Trigger: GAAATCCAACTTCGGCAACCACAAGTCGCGCCACCG...TGTCAACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR CCA 90 bp | CATCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTTGACAGCTGCTCTGCAGCACTaGGCACTGGAGATCTCTCAA | + |
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Preference number: 4 (lower is better) Translates to: HPGPVYHIVTHNPVLMLTAALQH*ALEISQ Trigger: TTGAGAGATCTCCAGTGCCCAGTGCTGCAGAGCAGC...TGTCAACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR CCA 90 bp | TCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTTGACAGAGGTCCCTGGACATCCTaGCCCAGTGTACCACATAGT | + |
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Preference number: 4 (lower is better) Translates to: SWPSVPHSNPQPCAYVDRGPWTS*PSVPHS Trigger: ACTATGTGGTACACTGGGCCAGGATGTCCAGGGACC...TCTGTCAACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR GCA 90 bp | CCCTGGACATCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGGAGATCTCTCAACGTaGTCAGTGCTACTTTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: PWTSWPSVPHSNPQPCAYGDLST*SVLLLA Trigger: AGCCAAAAGTAGCACTGAGCACGTTGAGAGATCTCC...ATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGATGTCCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR CCA 90 bp | GGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTTGACAGAGAGAACCAATGGAGTGAGATaGGGACCAATATCCCCGGTC | + |
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Preference number: 4 (lower is better) Translates to: GPVYHIVTHNPVLMLTERTNGVR*GPISPV Trigger: GACCGGGGATATTGGTCCCCATCTCACTCCATTGGT...TCTCTCTGTCAACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR TCA 90 bp | GGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTTGACAGAGAGACTGTCTGCAAAGCCTTaGACGGACAGTGTAACCCAT | + |
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Preference number: 4 (lower is better) Translates to: GPVYHIVTHNPVLMLTERLSAKP*TDSVTH Trigger: ATGGGTTACACTGTCCGTTCAAGGCTTTGCAGACAG...TCTCTCTGTCAACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR TCA 90 bp | CCCTGGACATCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATCAGCAAATGCTGATCTaGGAAATGTCACCATCACAC | + |
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Preference number: 4 (lower is better) Translates to: PWTSWPSVPHSNPQPCAYQQMLI*EMSPSH Trigger: GTGTGATGGTGACATTTCTCAGATCAGCATTTGCTG...ATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGATGTCCAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR GCA 90 bp | GGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTTGACAGAGAGACTTTTGCCACCACTGTaGTTGGCTCAGGACAGCAAT | + |
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Preference number: 4 (lower is better) Translates to: GPVYHIVTHNPVLMLTERLLPPL*LAQDSN Trigger: ATTGCTGTCCTGAGCCAAGCACAGTGGTGGCAAAAG...TCTCTCTGTCAACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR GCA 90 bp | TCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTTGACAGATCTCAACGTGCTCAGTaGTACTTTTGGCTGATGCTC | + |
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Preference number: 4 (lower is better) Translates to: SWPSVPHSNPQPCAYVDRSQRAQ*YFWLML Trigger: GAGCATCAGCCAAAAGTAGCACTGAGCACGTTGAGA...TCTGTCAACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR GCA 90 bp | CATCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTTGACATGGACAGTGATCATTTaGCCCAACAGCCATCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: HPGPVYHIVTHNPVLMLTWTVII*PNSHLK Trigger: CTTCAGATGGCTGTTGGGGCAAATGATCACTGTCCA...TGTCAACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR CCA 90 bp | CATCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTTGACATCACACAAGCCTGAGTaGACACACAGACCTTTTACC | + |
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Preference number: 4 (lower is better) Translates to: HPGPVYHIVTHNPVLMLTSHKPE*THRPFT Trigger: GGTAAAAGGTCTGTGTGTCCACTCAGGCTTGTGTGA...TGTCAACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR TCA 90 bp | GGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTTGACAGAGAGAGATGCCAGCAAATGCTaGTCTGAGAAATGTCACCAT | + |
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Preference number: 4 (lower is better) Translates to: GPVYHIVTHNPVLMLTERDASKC*SEKCHH Trigger: ATGGTGACATTTCTCAGATCAGCATTTGCTGGCATC...TCTCTCTGTCAACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR CCA 90 bp | TCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTTGACAGATGTGGTTGCCGAAGTTaGATTTCTCGCAAACCAGTA | + |
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Preference number: 4 (lower is better) Translates to: SWPSVPHSNPQPCAYVDRCGCRS*ISRKPV Trigger: TACTGGTTTGCGAGAAATCCAACTTCGGCAACCACA...TCTGTCAACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR CCA 90 bp | TCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTTGACAGAGCTCAGTGCTACTTTTaGCTGATGCTCCTGAATTTG | + |
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Preference number: 4 (lower is better) Translates to: SWPSVPHSNPQPCAYVDRAQCYF*LMLLNL Trigger: CAAATTCAGGAGCATCAGCCAAAAGTAGCACTGAGC...TCTGTCAACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR CCA 90 bp | CATCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTTGACAGAGACAGATCTTCTCTaGAAGTATGAAGCCAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: HPGPVYHIVTHNPVLMLTETDLL*KYEASD Trigger: ATCACTGGCTTCATACTTCCAGAGAAGATCTGTCTC...TGTCAACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR CCA 90 bp | CATCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTTGACAATATATCTCAACCAATaGAGTGAGATGGGGACCAAT | + |
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Preference number: 4 (lower is better) Translates to: HPGPVYHIVTHNPVLMLTIYLNQ*SEMGTN Trigger: ATTGGTCCCCATCTCACTCCATTGGTTGAGATATAT...TGTCAACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR TCA 90 bp | TCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTTGACAGAAGGACAGCAATAGGTTaGTATGAAATTATTAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SWPSVPHSNPQPCAYVDRRTAIG*YEIIRL Trigger: GAGCCTAATAATTTCATATCAACCTATTGCTGTCCT...TCTGTCAACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS CCA 90 bp | TGCCGCGGCGCCTCCCGAAGCCGGCGCAGCGTGGCCATGCTCTCCTaGGTTCCTGGTCCTCCCGGCCTCCGCTGGCGGGGCACGCCCCGC | + |
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Preference number: 5 (lower is better) Translates to: CRGASRSRRSVAMLS*VPGPPGLRWRGTPR Trigger: GCGGGGCGTGCCCCGCCAGCGGAGGCCGGGAGGACCAGGAACCCAGGAGAGCATGGCCACGCTGCGCCGGCTTCGGGAGGCGCCGCGGCA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000483546.1 ENST00000618533.4 |
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| CDS GCA 90 bp | CCAGTAAGTGCCGCGGCGCCTCCCGAAGCCGGCGCAGCGTGGCCATaGTCTCCTGGGTTCCTGGTCCTCCCGGCCTCCGCTGGCGGGGCA | + |
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Preference number: 5 (lower is better) Translates to: PVSAAAPPEAGAAWP*SPGFLVLPASAGGA Trigger: TGCCCCGCCAGCGGAGGCCGGGAGGACCAGGAACCCAGGAGAGCATGGCCACGCTGCGCCGGCTTCGGGAGGCGCCGCGGCACTTACTGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000468105.5 ENST00000483546.1 ENST00000618533.4 |
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| CDS CCA 90 bp | CGCAAACCAGTAAGTGCCGCGGCGCCTCCCGAAGCCGGCGCAGCGTaGCCATGCTCTCCTGGGTTCCTGGTCCTCCCGGCCTCCGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: RKPVSAAAPPEAGAA*PCSPGFLVLPASAG Trigger: GCCAGCGGAGGCCGGGAGGACCAGGAACCCAGGAGAGCATGGCCACGCTGCGCCGGCTTCGGGAGGCGCCGCGGCACTTACTGGTTTGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000468105.5 ENST00000483546.1 ENST00000618533.4 |
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| CDS GCA 90 bp | CGCGACTTGTGGTTGCCGAAGTTGGATTTCTCGCAAACCAGTAAGTaGCGCGGCGCCTCCCGAAGCCGGCGCAGCGTGGCCATGCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: RDLWLPKLDFSQTSK*RGASRSRRSVAMLS Trigger: GGAGAGCATGGCCACGCTGCGCCGGCTTCGGGAGGCGCCGCGGCACTTACTGGTTTGCGAGAAATCCAACTTCGGCAACCACAAGTCGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000319533.9 ENST00000380051.7 ENST00000468105.5 ENST00000479782.1 ENST00000483546.1 ENST00000618533.4 |
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| CDS GCA 90 bp | GCTCCAGAGCCCGGCAGGACACCTCTGGCGTTCCCTCCAGCTCGCTaGTCTGCAGCACTGGGCACTGGAGATCTCTCAACGTGCTCAGTG | + |
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Preference number: 5 (lower is better) Translates to: APEPGRTPLAFPPAR*SAALGTGDLSTCSV Trigger: CACTGAGCACGTTGAGAGATCTCCAGTGCCCAGTGCTGCAGAGCAGCGAGCTGGAGGGAACGCCAGAGGTGTCCTGCCGGGCTCTGGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000319533.9 ENST00000380051.7 ENST00000464646.1 ENST00000618533.4 |
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| CDS GCA 90 bp | AGAGCCCGGCAGGACACCTCTGGCGTTCCCTCCAGCTCGCTGCTCTaGAGCACTGGGCACTGGAGATCTCTCAACGTGCTCAGTGCTACT | + |
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Preference number: 5 (lower is better) Translates to: RARQDTSGVPSSSLL*STGHWRSLNVLSAT Trigger: AGTAGCACTGAGCACGTTGAGAGATCTCCAGTGCCCAGTGCTGCAGAGCAGCGAGCTGGAGGGAACGCCAGAGGTGTCCTGCCGGGCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000319533.9 ENST00000380051.7 ENST00000464646.1 ENST00000618533.4 |
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| CDS CCA 90 bp | GCGTCTGCACAAGATGCCGGTGGCGCGACTTGTGGTTGCCGAAGTTaGATTTCTCGCAAACCAGTAAGTGCCGCGGCGCCTCCCGAAGCC | + |
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Preference number: 5 (lower is better) Translates to: ASAQDAGGATCGCRS*ISRKPVSAAAPPEA Trigger: GGCTTCGGGAGGCGCCGCGGCACTTACTGGTTTGCGAGAAATCCAACTTCGGCAACCACAAGTCGCGCCACCGGCATCTTGTGCAGACGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000319533.9 ENST00000380051.7 ENST00000468105.5 ENST00000479782.1 ENST00000483546.1 ENST00000618533.4 |
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| CDS CCA 90 bp | GCAGGACACCTCTGGCGTTCCCTCCAGCTCGCTGCTCTGCAGCACTaGGCACTGGAGATCTCTCAACGTGCTCAGTGCTACTTTTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: AGHLWRSLQLAALQH*ALEISQRAQCYFWL Trigger: CAGCCAAAAGTAGCACTGAGCACGTTGAGAGATCTCCAGTGCCCAGTGCTGCAGAGCAGCGAGCTGGAGGGAACGCCAGAGGTGTCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000319533.9 ENST00000380051.7 ENST00000464646.1 ENST00000618533.4 |
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| CDS-3UTR CAA 90 bp | TCAACCAATGGAGTGAGATGGGGACCAATATCCCCGGTCCCTGGACATCCTGGCACTGGACAGCAGGCCTaGCTGCCATCACAGATGGGT | + |
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Preference number: 5 (lower is better) Translates to: STNGVRWGPISPVPGHPGTGQQA*LPSQMG Trigger: ACCCATCTGTGATGGCAGCAAGGCCTGCTGTCCAGT...GCCAGGATGTCCAGGGACCGGGGATATTGGTCCCCATCTCACTCCATTGGTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS GCA 90 bp | TATAGTAGTGCGTCTGCACAAGATGCCGGTGGCGCGACTTGTGGTTaGCGAAGTTGGATTTCTCGCAAACCAGTAAGTGCCGCGGCGCCT | + |
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Preference number: 5 (lower is better) Translates to: YSSASAQDAGGATCG*RSWISRKPVSAAAP Trigger: AGGCGCCGCGGCACTTACTGGTTTGCGAGAAATCCAACTTCGGCAACCACAAGTCGCGCCACCGGCATCTTGTGCAGACGCACTACTATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000319533.9 ENST00000380051.7 ENST00000468105.5 ENST00000479782.1 ENST00000483546.1 ENST00000618533.4 |
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| CDS-3UTR CAA 90 bp | CCCTGGACATCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATTGCCGGTGGCGCGACTaGTGGTTGCCGAAGTTGGAT | + |
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Preference number: 5 (lower is better) Translates to: PWTSWPSVPHSNPQPCAYCRWRD*WLPKLD Trigger: ATCCAACTTCGGCAACCACAAGTCGCGCCACCGGCA...ATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGATGTCCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS GCA 90 bp | CCAGCTCGCTGCTCTGCAGCACTGGGCACTGGAGATCTCTCAACGTaGTCAGTGCTACTTTTGGCTGATGCTCCTGAATTTGGTACTTGG | + |
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Preference number: 5 (lower is better) Translates to: PARCSAALGTGDLST*SVLLLADAPEFGTW Trigger: CCAAGTACCAAATTCAGGAGCATCAGCCAAAAGTAGCACTGAGCACGTTGAGAGATCTCCAGTGCCCAGTGCTGCAGAGCAGCGAGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000319533.9 ENST00000380051.7 ENST00000464646.1 ENST00000618533.4 |
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| CDS-3UTR CAA 90 bp | CCCTGGACATCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATTGGCGCGACTTGTGGTaGCCGAAGTTGGATTTCTCG | + |
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Preference number: 5 (lower is better) Translates to: PWTSWPSVPHSNPQPCAYWRDLW*PKLDFS Trigger: CGAGAAATCCAACTTCGGCAACCACAAGTCGCGCCA...ATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGATGTCCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR CAA 90 bp | AGTGAGATGGGGACCAATATCCCCGGTCCCTGGACATCCTGGCCCAGTGTACCATACACAAATAAGCTTTaGCCACCACTGTGCTTGGCT | + |
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Preference number: 5 (lower is better) Translates to: SEMGTNIPGPWTSWPSVPYTNKL*PPLCLA Trigger: AGCCAAGCACAGTGGTGGCAAAAGCTTATTTGTGTA...TGGTACACTGGGCCAGGATGTCCAGGGACCGGGGATATTGGTCCCCATCTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR CAA 90 bp | GGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTTGACAGAGAGAGTGGACAGTGATCATTaGCCCCAACAGCCATCTGAA | + |
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Preference number: 5 (lower is better) Translates to: GPVYHIVTHNPVLMLTERVDSDH*PQQPSE Trigger: TTCAGATGGCTGTTGGGGCAAATGATCACTGTCCAC...TCTCTCTGTCAACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS GCA 90 bp | GCTGCTCTGCAGCACTGGGCACTGGAGATCTCTCAACGTGCTCAGTaGTACTTTTGGCTGATGCTCCTGAATTTGGTACTTGGAAAAATA | + |
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Preference number: 5 (lower is better) Translates to: AALQHWALEISQRAQ*YFWLMLLNLVLGKI Trigger: TATTTTTCCAAGTACCAAATTCAGGAGCATCAGCCAAAAGTAGCACTGAGCACGTTGAGAGATCTCCAGTGCCCAGTGCTGCAGAGCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000319533.9 ENST00000380051.7 ENST00000464646.1 ENST00000618533.4 |
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| CDS-3UTR CAA 90 bp | TCCTGGCCCAGTGTACCACATAGTAACCCACAACCCTGTGCTTATGTTGACAGATTGTGGTTGCCGAAGTaGGATTTCTCGCAAACCAGT | + |
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Preference number: 5 (lower is better) Translates to: SWPSVPHSNPQPCAYVDRLWLPK*DFSQTS Trigger: ACTGGTTTGCGAGAAATCCAACTTCGGCAACCACAA...TCTGTCAACATAAGCACAGGGTTGTGGGTTACTATGTGGTACACTGGGCCAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR CAA 90 bp | ATATATCTCAACCAATGGAGTGAGATGGGGACCAATATCCCCGGTCCCTGGACATGCTCAGTGCTACTTTaGGCTGATGCTCCTGAATTT | + |
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Preference number: 5 (lower is better) Translates to: IYLNQWSEMGTNIPGPWTCSVLL*ADAPEF Trigger: AAATTCAGGAGCATCAGCCAAAAGTAGCACTGAGCA...TGTCCAGGGACCGGGGATATTGGTCCCCATCTCACTCCATTGGTTGAGATATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS-3UTR CAA 90 bp | ATATATCTCAACCAATGGAGTGAGATGGGGACCAATATCCCCGGTCCCTGGACAAACCCTGTGCTTATGTaGACAGAGAGAAATCAACTA | + |
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Preference number: 5 (lower is better) Translates to: IYLNQWSEMGTNIPGPWTNPVLM*TERNQL Trigger: TAGTTGATTTCTCTCTGTCAACATAAGCACAGGGTT...TGTCCAGGGACCGGGGATATTGGTCCCCATCTCACTCCATTGGTTGAGATATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000380051.7 |
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| CDS CCA 72 bp | AAGCCGGCGCAGCGTGGCCATGCTCTCCTGGGTTCCTaGTCCTCCCGGCCTCCGCTGGCGGGGCACGCCCCG | + |
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Preference number: 6 (lower is better) Translates to: KPAQRGHALLGS*SSRPPLAGHAP Trigger: CGGGGCGTGCCCCGCCAGCGGAGGCCGGGAGGACCAGGAACCCAGGAGAGCATGGCCACGCTGCGCCGGCTT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000483546.1 ENST00000618533.4 |
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| CDS GCA 72 bp | CCCGGCAGGACACCTCTGGCGTTCCCTCCAGCTCGCTaGTCTGCAGCACTGGGCACTGGAGATCTCTCAACG | + |
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Preference number: 6 (lower is better) Translates to: PGRTPLAFPPAR*SAALGTGDLST Trigger: CGTTGAGAGATCTCCAGTGCCCAGTGCTGCAGAGCAGCGAGCTGGAGGGAACGCCAGAGGTGTCCTGCCGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000319533.9 ENST00000380051.7 ENST00000464646.1 ENST00000618533.4 |
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| CDS CAA 90 bp | TGCGTCTGCACAAGATGCCGGTGGCGCGACTTGTGGTTGCCGAAGTaGGATTTCTCGCAAACCAGTAAGTGCCGCGGCGCCTCCCGAAGC | + |
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Preference number: 6 (lower is better) Translates to: CVCTRCRWRDLWLPK*DFSQTSKCRGASRS Trigger: GCTTCGGGAGGCGCCGCGGCACTTACTGGTTTGCGAGAAATCCAACTTCGGCAACCACAAGTCGCGCCACCGGCATCTTGTGCAGACGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000319533.9 ENST00000380051.7 ENST00000468105.5 ENST00000479782.1 ENST00000483546.1 ENST00000618533.4 |
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| CDS CCA 72 bp | CAAGATGCCGGTGGCGCGACTTGTGGTTGCCGAAGTTaGATTTCTCGCAAACCAGTAAGTGCCGCGGCGCCT | + |
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Preference number: 6 (lower is better) Translates to: QDAGGATCGCRS*ISRKPVSAAAP Trigger: AGGCGCCGCGGCACTTACTGGTTTGCGAGAAATCCAACTTCGGCAACCACAAGTCGCGCCACCGGCATCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000319533.9 ENST00000380051.7 ENST00000468105.5 ENST00000479782.1 ENST00000483546.1 ENST00000618533.4 |
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| CDS CAA 72 bp | ACAAGATGCCGGTGGCGCGACTTGTGGTTGCCGAAGTaGGATTTCTCGCAAACCAGTAAGTGCCGCGGCGCC | + |
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Preference number: 6 (lower is better) Translates to: TRCRWRDLWLPK*DFSQTSKCRGA Trigger: GGCGCCGCGGCACTTACTGGTTTGCGAGAAATCCAACTTCGGCAACCACAAGTCGCGCCACCGGCATCTTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000319533.9 ENST00000380051.7 ENST00000468105.5 ENST00000479782.1 ENST00000483546.1 ENST00000618533.4 |
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| CDS GCA 72 bp | GCGTCTGCACAAGATGCCGGTGGCGCGACTTGTGGTTaGCGAAGTTGGATTTCTCGCAAACCAGTAAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: ASAQDAGGATCG*RSWISRKPVSA Trigger: GGCACTTACTGGTTTGCGAGAAATCCAACTTCGGCAACCACAAGTCGCGCCACCGGCATCTTGTGCAGACGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000319533.9 ENST00000380051.7 ENST00000468105.5 ENST00000479782.1 ENST00000483546.1 ENST00000618533.4 |
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| CDS CAA 72 bp | TGCGTCTGCACAAGATGCCGGTGGCGCGACTTGTGGTaGCCGAAGTTGGATTTCTCGCAAACCAGTAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: CVCTRCRWRDLW*PKLDFSQTSKC Trigger: GCACTTACTGGTTTGCGAGAAATCCAACTTCGGCAACCACAAGTCGCGCCACCGGCATCTTGTGCAGACGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000319533.9 ENST00000380051.7 ENST00000468105.5 ENST00000479782.1 ENST00000483546.1 ENST00000618533.4 |
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| CDS CCA 72 bp | TGTTTGAAACAAAACAACAGCCCTAGCATCGTGATGTaGTCTCCCTACCCTTCCTCATCCAGCCTTGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: CLKQNNSPSIVM*SPYPSSSSLVH Trigger: GTGAACAAGGCTGGATGAGGAAGGGTAGGGAGACCACATCACGATGCTAGGGCTGTTGTTTTGTTTCAAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000483546.1 |
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| CDS CAA 90 bp | GCAGCACTGGGCACTGGAGATCTCTCAACGTGCTCAGTGCTACTTTaGGCTGATGCTCCTGAATTTGGTACTTGGAAAAATATGACATCA | + |
|
Preference number: 6 (lower is better) Translates to: AALGTGDLSTCSVLL*ADAPEFGTWKNMTS Trigger: TGATGTCATATTTTTCCAAGTACCAAATTCAGGAGCATCAGCCAAAAGTAGCACTGAGCACGTTGAGAGATCTCCAGTGCCCAGTGCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000319533.9 ENST00000380051.7 ENST00000464646.1 ENST00000618533.4 |
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| CDS CAA 72 bp | GGCACTGGAGATCTCTCAACGTGCTCAGTGCTACTTTaGGCTGATGCTCCTGAATTTGGTACTTGGAAAAAT | + |
|
Preference number: 6 (lower is better) Translates to: GTGDLSTCSVLL*ADAPEFGTWKN Trigger: ATTTTTCCAAGTACCAAATTCAGGAGCATCAGCCAAAAGTAGCACTGAGCACGTTGAGAGATCTCCAGTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000319533.9 ENST00000380051.7 ENST00000464646.1 ENST00000618533.4 |
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| CDS CCA 72 bp | GCACTGGAGATCTCTCAACGTGCTCAGTGCTACTTTTaGCTGATGCTCCTGAATTTGGTACTTGGAAAAATA | + |
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Preference number: 6 (lower is better) Translates to: ALEISQRAQCYF*LMLLNLVLGKI Trigger: TATTTTTCCAAGTACCAAATTCAGGAGCATCAGCCAAAAGTAGCACTGAGCACGTTGAGAGATCTCCAGTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000319533.9 ENST00000380051.7 ENST00000464646.1 ENST00000618533.4 |
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| CDS CAA 72 bp | GCTCCTGAATTTGGTACTTGGAAAAATATGACATCATaGTCGATTCTTCTGAACCTGTTTTATGCCAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: APEFGTWKNMTS*SILLNLFYAKP Trigger: TGGCTTGGCATAAAACAGGTTCAGAAGAATCGACAATGATGTCATATTTTTCCAAGTACCAAATTCAGGAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000319533.9 ENST00000380051.7 ENST00000464646.1 |
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